The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [ "R-ALL-449701" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6799604", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6799604" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-449701", "participant_name": "GlcN6P [cytosol]", "crossref": [ { "id": "75989", "database": "ChEBI", "url": "" }, { "id": "ZINC000004097103", "database": "ZINC", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1UI84", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UI84" }, { "id": "PF01182", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01182" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Glucosamine/galactosamine-6-phosphate isomerase", "eco_id": "ECO_0000259", "start_pos": 15, "end_pos": 232, "start_aa": "Trp", "end_aa": "His", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 110, "end_pos": 112 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1UI88-1", "uniprot_ac": "A0A4X1UI88", "uniprot_id": "A0A4X1UI88_PIG", "mass": { "chemical_mass": 46460.0, "monoisotopic_mass": 46460.0 }, "refseq": { "ac": "XP_005659845", "name": "ceramide synthase 3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005659845" }, "gene_names": [ { "name": "CERS3", "type": "recommended", "evidence": [ { "id": "A0A4X1UI88", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UI88" } ] }, { "name": "CERS3", "type": "synonym", "evidence": [ { "id": "XP_005659845", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005659845" } ] } ], "protein_names": [ { "name": "sphingosine N-acyltransferase", "type": "recommended", "evidence": [ { "id": "A0A4X1UI88", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UI88/entry#names_and_taxonomy" } ] }, { "name": "2.3.1.24", "type": "synonym", "evidence": [ { "id": "A0A4X1UI88", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UI88/entry#names_and_taxonomy" } ] }, { "name": "ceramide synthase 3", "type": "synonym", "evidence": [ { "id": "XP_005659845", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005659845" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UI88", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UI88" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CERS3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UI88", "locus": { "chromosome": "1", "start_pos": 139030642, "end_pos": 139136874, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004819", "url": "https://www.ensembl.org/id/ENSSSCG00000004819" } ] } } ], "crossref": [ { "id": "A0A4X1UI88", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1UI88", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd00086", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00086", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100152265", "url": "https://www.ncbi.nlm.nih.gov/gene/100152265", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001356", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001356", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006634", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006634", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009057", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009057", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016439", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016439", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100152265", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152265", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DHDGLIF", "url": "https://omabrowser.org/oma/group/DHDGLIF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1UI88", "url": "https://www.orthodb.org/?gene=A0A4X1UI88", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12560", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12560", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12560:SF18", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12560:SF18", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00046", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00046", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03798", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03798", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-1660661", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1660661", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_005659845", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005659845", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "23768", "url": "https://www.rhea-db.org/rhea/23768", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "33351", "url": "https://www.rhea-db.org/rhea/33351", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "33591", "url": "https://www.rhea-db.org/rhea/33591", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "36535", "url": "https://www.rhea-db.org/rhea/36535", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "36547", "url": "https://www.rhea-db.org/rhea/36547", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "36555", "url": "https://www.rhea-db.org/rhea/36555", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "36691", "url": "https://www.rhea-db.org/rhea/36691", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1UI88", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UI88", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UI88-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UI88-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFQTFKEWFWLERFWLPPTIKWSDLEDHDGLIFVKPSHLYMTIPYALGLMIIRYFFEKFIASPLAKTFGIKEQVQKITPNTTLEKFFKQSTRHPSQTDIYGLAKKCNLTERQVERWFRSRRNQERPSRMKKFQEACWRFAFYLMISVAGIAFLYDKPWAYDLWEVWNGYPRQPLLPSQYWYYILEMSFYWSLLFSLGSDIKRKDFLAHVIHHLAAISLMSFSWCANYIRSGTLVMVVHDVADMWLESAKMFSYAGWKKTCNILFFIFSVIFFISRLVIFPFWILYCTLILPLHYLEPFFSYIFLNLQLMILQVLHLYWGYFILKMLKRCIFTKNLKDVRSDDEDEYEEEVEEEMEEEAIKSQERDCLKNGLEANRDLIPNGQHSH", "length": 385, "header": "tr|A0A4X1UI88-1|A0A4X1UI88_PIG Isoform 1 of sphingosine N-acyltransferase OS=Sus scrofa OX=9823 GN=CERS3 PE=3 SV=1 CANONICAL=A0A4X1UI88-1" }, "isoforms": [ { "isoform_ac": "A0A4X1UI88-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UI88/entry", "sequence": { "sequence": "MFQTFKEWFWLERFWLPPTIKWSDLEDHDGLIFVKPSHLYMTIPYALGLMIIRYFFEKFIASPLAKTFGIKEQVQKITPNTTLEKFFKQSTRHPSQTDIYGLAKKCNLTERQVERWFRSRRNQERPSRMKKFQEACWRFAFYLMISVAGIAFLYDKPWAYDLWEVWNGYPRQPLLPSQYWYYILEMSFYWSLLFSLGSDIKRKDFLAHVIHHLAAISLMSFSWCANYIRSGTLVMVVHDVADMWLESAKMFSYAGWKKTCNILFFIFSVIFFISRLVIFPFWILYCTLILPLHYLEPFFSYIFLNLQLMILQVLHLYWGYFILKMLKRCIFTKNLKDVRSDDEDEYEEEVEEEMEEEAIKSQERDCLKNGLEANRDLIPNGQHSH", "length": 385, "header": "tr|A0A4X1UI88-1|A0A4X1UI88_PIG Isoform 1 of sphingosine N-acyltransferase OS=Sus scrofa OX=9823 GN=CERS3 PE=3 SV=1 CANONICAL=A0A4X1UI88-1" }, "locus": { "chromosome": "1", "start_pos": 139111801, "end_pos": 139033107, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005321.4", "url": "https://www.ensembl.org/id/ENSSSCT00000005321.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005191.2", "url": "https://www.ensembl.org/id/ENSSSCP00000005191.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UI88", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UI88" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152265", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152265", "resource": "KEGG Pathway" }, { "id": "R-SSC-1660661", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1660661", "resource": "Reactome", "description": "Sphingolipid de novo biosynthesis" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Z8I2-1", "protein_name": "Ceramide synthase 3", "gene_name": "CERS3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAHILKTLNSWFWWENIWMPINCTWADFVDRDGLVFPKPQQLYATIPYAFVLLIIRFFTERYIAIPLAKALGIKNVRRVKPQPNPVLESYFRECSRHPSQSEIQGLAKKCNCTVHLVEKWFRRRRNLEIPTVLRKFQEAFWRFSFYFTSSIAGFIFLHDKPWFYDIWQTWVGYPFQQASPRETLLPSQYWYYMAEISFYWSLLFTLGIDTKRKDFLAHVVHHFAAIGLMSCSWCGNYVRVGTLVMFVHDTADFWLEAAKMFNYARWEKTCNLLFFIFSVAFFITRIILFPFWILRATLYQPTFYSTTPVIAYFLFNGQLLILQGLHLYWGYLIFKILKRFIFLKDLKDDRSDEEEEDSVTDNEEESTNGNKNGCGSGKHLLNSSHH", "length": 386 }, "evidence": [ { "id": "A0A4X1UI88", "url": "https://omabrowser.org/oma/group/A0A4X1UI88/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q1A3B0-1", "protein_name": "Ceramide synthase 3", "gene_name": "Cers3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQTFRKWFWSERYWLPPTIKWSDLEDHDGLVFVKASHLYITIPYAFLLMVVRYFFEKFVATPLANALGIKKTQHKIKPNAILENFFKHSTSKPSHTDIYGLAKKCNLTERQVERWLRIRQKQNKPCRLQKFQESCWRFTFYLLITMAGAVFLYDKPWAYDLWEVWNDYPRQPLLPSQYWYYILEMSFYWSLVFSLSTDIKRKDFLAHVIHHLAAISLMSFSWCANYIRSGTLVMFIHDISDIWLESAKMFSYAGWKQTCNTLFFIFTVVFFISRFIIFPFWILYCTLILPLHYLEPFFSYIFLNLQLMILQGLHVYWGYFILKMLNRCIFTQNVQDVRSDNEEEEEEEEEEEAESTKGKETEYLKNGLGTNRHLIANGQHGR", "length": 383 }, "evidence": [ { "id": "A0A4X1UI88", "url": "https://omabrowser.org/oma/group/A0A4X1UI88/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IU89-1", "protein_name": "Ceramide synthase 3", "gene_name": "CERS3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MFWTFKEWFWLERFWLPPTIKWSDLEDHDGLVFVKPSHLYVTIPYAFLLLIIRRVFEKFVASPLAKSFGIKETVRKVTPNTVLENFFKHSTRQPLQTDIYGLAKKCNLTERQVERWFRSRRNQERPSRLKKFQEACWRFAFYLMITVAGIAFLYDKPWLYDLWEVWNGYPKQPLLPSQYWYYILEMSFYWSLLFRLGFDVKRKDFLAHIIHHLAAISLMSFSWCANYIRSGTLVMIVHDVADIWLESAKMFSYAGWTQTCNTLFFIFSTIFFISRLIVFPFWILYCTLILPMYHLEPFFSYIFLNLQLMILQVLHLYWGYYILKMLNRCIFMKSIQDVRSDDEDYEEEEEEEEEEATKGKEMDCLKNGLRAERHLIPNGQHGH", "length": 383 }, "evidence": [ { "id": "A0A4X1UI88", "url": "https://omabrowser.org/oma/group/A0A4X1UI88/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UI88", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UI88" } ], "pmid": "" }, { "name": "sphingosine N-acyltransferase activity", "id": "GO:0050291", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050291", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UI88", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UI88" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UI88", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UI88" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UI88", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UI88" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UI88", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UI88" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "ceramide biosynthetic process", "id": "GO:0046513", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046513", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UI88", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UI88" } ], "pmid": "" }, { "name": "cornification", "id": "GO:0070268", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070268", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UI88", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UI88" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 107, "end_pos": 109, "annotation": "n_glycosylation_sequon" }, { "start_pos": 80, "end_pos": 82, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "23768", "name": "", "equation": "sphing-4-enine + a fatty acyl-CoA = an N-acylsphing-4-enine + CoA + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "23768", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/23768" } ] }, { "id": "33351", "name": "", "equation": "hexacosanoyl-CoA + sphinganine = N-hexacosanoylsphinganine + CoA + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "33351", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/33351" } ] }, { "id": "33591", "name": "", "equation": "tetracosanoyl-CoA + sphinganine = N-tetracosanoylsphinganine + CoA + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "33591", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/33591" } ] }, { "id": "36535", "name": "", "equation": "docosanoyl-CoA + sphinganine = N-docosanoylsphinganine + CoA + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "36535", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/36535" } ] }, { "id": "36547", "name": "", "equation": "sphinganine + octadecanoyl-CoA = N-(octadecanoyl)-sphinganine + CoA + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "36547", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/36547" } ] }, { "id": "36555", "name": "", "equation": "eicosanoyl-CoA + sphinganine = N-eicosanoylsphinganine + CoA + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "36555", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/36555" } ] }, { "id": "36691", "name": "", "equation": "sphing-4-enine + octadecanoyl-CoA = N-octadecanoylsphing-4-enine + CoA + H(+)", "summary": "", 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More details and caveats of the event inference in Reactome. 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"https://www.reactome.org/PathwayBrowser/#R-SSC-1169408", "resource": "Reactome", "description": "ISG15 antiviral mechanism" }, { "id": "R-SSC-141430", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-141430", "resource": "Reactome", "description": "Inactivation of APC/C via direct inhibition of the APC/C complex" }, { "id": "R-SSC-174048", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174048", "resource": "Reactome", "description": "APC/C:Cdc20 mediated degradation of Cyclin B" }, { "id": "R-SSC-174084", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174084", "resource": "Reactome", "description": "Autodegradation of Cdh1 by Cdh1:APC/C" }, { "id": "R-SSC-174154", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174154", "resource": "Reactome", "description": "APC/C:Cdc20 mediated degradation of Securin" }, { "id": "R-SSC-174178", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174178", "resource": "Reactome", "description": "APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1" }, { "id": "R-SSC-174184", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174184", "resource": "Reactome", "description": "Cdc20:Phospho-APC/C mediated degradation of Cyclin A" }, { "id": "R-SSC-176407", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-176407", "resource": "Reactome", "description": "Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase" }, { "id": "R-SSC-176408", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-176408", "resource": "Reactome", "description": "Regulation of APC/C activators between G1/S and early anaphase" }, { "id": "R-SSC-176409", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-176409", "resource": "Reactome", "description": "APC/C:Cdc20 mediated degradation of mitotic proteins" }, { "id": "R-SSC-176412", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-176412", "resource": "Reactome", "description": "Phosphorylation of the APC/C" }, { "id": "R-SSC-179409", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-179409", "resource": "Reactome", "description": "APC-Cdc20 mediated degradation of Nek2A" }, { "id": "R-SSC-2467813", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2467813", "resource": "Reactome", "description": "Separation of Sister Chromatids" }, { "id": "R-SSC-2559582", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2559582", "resource": "Reactome", "description": "Senescence-Associated Secretory Phenotype (SASP)" }, { "id": "R-SSC-68867", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-68867", "resource": "Reactome", "description": "Assembly of the pre-replicative complex" }, { "id": "R-SSC-69017", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-69017", "resource": "Reactome", "description": "CDK-mediated phosphorylation and removal of Cdc6" }, { "id": "R-SSC-8866652", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8866652", "resource": "Reactome", "description": "Synthesis of active ubiquitin: roles of E1 and E2 enzymes" }, { "id": "R-SSC-8866654", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8866654", "resource": "Reactome", "description": "E3 ubiquitin ligases ubiquitinate target proteins" }, { "id": "R-SSC-983168", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983168", "resource": "Reactome", "description": "Antigen processing: Ubiquitination & Proteasome degradation" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIJ3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIJ3" } ], "pmid": "" }, { "name": "ISG15 transferase activity", "id": "GO:0042296", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042296", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIJ3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIJ3" } ], "pmid": "" }, { "name": "ubiquitin conjugating enzyme activity", "id": "GO:0061631", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061631", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIJ3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIJ3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIJ3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIJ3" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIJ3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIJ3" } ], "pmid": "" }, { "name": "ubiquitin ligase complex", "id": "GO:0000151", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000151", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIJ3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIJ3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIJ3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIJ3" } ], "pmid": "" }, { "name": "protein K48-linked ubiquitination", "id": "GO:0070936", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070936", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIJ3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIJ3" } ], "pmid": "" }, { "name": "ISG15-protein conjugation", "id": "GO:0032020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032020", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIJ3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIJ3" } ], "pmid": "" }, { "name": "protein monoubiquitination", "id": "GO:0006513", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006513", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIJ3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIJ3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 138, "end_pos": 140, "annotation": "n_glycosylation_sequon" }, { "start_pos": 66, "end_pos": 68, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-1169402", "name": "ISGylation of E2 conjugating enzymes", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1169402", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1169402" } ] }, { "id": "R-SSC-1169406", "name": "ISGylation of host proteins", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1169406", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1169406" } ] }, { "id": "R-SSC-141423", "name": "Binding of the MCC complex to the APC/C complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-141423", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-141423" } ] }, { "id": "R-SSC-1678841", "name": "Regulation of protein ISGylation by ISG15 deconjugating enzyme USP18", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1678841", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1678841" } ] }, { "id": "R-SSC-174057", "name": "Multiubiquitination of APC/C-associated Cdh1", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174057", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174057" } ] }, { "id": "R-SSC-174058", "name": "Degradation of multiubiquitinated Cdh1", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174058", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174058" } ] }, { "id": "R-SSC-174070", "name": "Association of Cdh1 with the APC/C", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174070", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174070" } ] }, { "id": "R-SSC-174079", "name": "Phosphorylation of Cdh1 by Cyclin A:Cdk2", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174079", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174079" } ] }, { "id": "R-SSC-174088", "name": "Association of cell cycle proteins with the APC/C:Cdh1 complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174088", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174088" } ] }, { "id": "R-SSC-174104", "name": "Ubiquitination of Cyclin A by APC/C:Cdc20 complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174104", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174104" } ] }, { "id": "R-SSC-174105", "name": "Degradation of multiubiquitinated cell cycle proteins", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174105", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174105" } ] }, { "id": "R-SSC-174119", "name": "Free APC/C phosphorylated by Plk1", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174119", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174119" } ] }, { "id": "R-SSC-174120", "name": "Association of Cyclin B:Cdc2 with Cdc20:APC/C complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174120", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174120" } ] }, { "id": "R-SSC-174121", "name": "Association of Securin with Cdc20:APC/C complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174121", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174121" } ] }, { "id": "R-SSC-174132", "name": "Free APC/C phosphorylated by Cyclin B:Cdc2", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174132", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174132" } ] }, { "id": "R-SSC-174139", "name": "Dissociation of phospho-Cdh1 from the APC/C complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174139", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174139" } ] }, { "id": "R-SSC-174144", "name": "Ubiquitination of Securin by phospho-APC/C:Cdc20 complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174144", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174144" } ] }, { "id": "R-SSC-174157", "name": "Degradation of multiubiquitinated Cyclin B", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174157", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174157" } ] }, { "id": "R-SSC-174171", "name": "Association of Cyclin A with the APC/C", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174171", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174171" } ] }, { "id": "R-SSC-174195", "name": "Ubiquitination of cell cycle proteins targeted by the APC/C:Cdh1complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174195", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174195" } ] }, { "id": "R-SSC-174202", "name": "Degradation of multiubiquitinated Securin", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174202", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174202" } ] }, { "id": "R-SSC-174224", "name": "Dissociation of Cdc20 from APC/C complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174224", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174224" } ] }, { "id": "R-SSC-174227", "name": "Ubiquitination of Cyclin B by phospho-APC/C:Cdc20 complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174227", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174227" } ] }, { "id": "R-SSC-174238", "name": "Activation of APC/C:Cdc20 by dissociation of Cdc20:phospho-APC/C from Cdc20:phospho-APC/C:Mad2:Bub3:BubR1", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174238", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174238" } ] }, { "id": "R-SSC-174255", "name": "Degradation multiubiquitinated Cyclin A", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174255", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174255" } ] }, { "id": "R-SSC-179417", "name": "Multiubiquitination of Nek2A", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-179417", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-179417" } ] }, { "id": "R-SSC-179421", "name": "Degradation of multiubiquitinated Nek2A", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-179421", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-179421" } ] }, { "id": "R-SSC-188191", "name": "APC/C:Cdh1-mediated degradation of Skp2", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-188191", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-188191" } ] }, { "id": "R-SSC-188371", "name": "Association of Cyclin A:Cdk2 with Cdh1", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-188371", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-188371" } ] }, { "id": "R-SSC-3788705", "name": "CDKN1A (p21) prevents phosphorylation of Cdh1 by Cyclin A:Cdk2", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-3788705", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3788705" } ] }, { "id": "R-SSC-3788708", "name": "CDKN1A (p21) prevents association of Cyclin A:Cdk2 with Cdh1", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-3788708", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3788708" } ] }, { "id": "R-SSC-3788724", "name": "Cdh1:APC/C ubiquitinates EHMT1 and EHMT2", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-3788724", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3788724" } ] }, { "id": "R-SSC-3788725", "name": "Cdh1:APC/C complex binds EHMT1:EHMT2", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-3788725", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3788725" } ] }, { "id": "R-SSC-68712", "name": "The geminin component of geminin:Cdt1 complexes is ubiquitinated, releasing Cdt1", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-68712", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-68712" } ] }, { "id": "R-SSC-69015", "name": "Cytoplasmic phosphorylated Cdc6 is ubiquitinated by the anaphase-promoting complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-69015", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-69015" } ] }, { "id": "R-SSC-8852130", "name": "UBA1 conjugates ubiquitin to nuclear E2 enzymes", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-8852130", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8852130" } ] }, { "id": "R-SSC-8939323", "name": "RNF181 binds BCL10 and Ubiquitin:E2", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-8939323", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8939323" } ] }, { "id": "R-SSC-8939335", "name": "RNF181 polyubiquinates BCL10", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-8939335", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8939335" } ] }, { "id": "R-SSC-9686969", "name": "APC/C:Cdh1 polyubiquitinates SKP2", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9686969", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9686969" } ] }, { "id": "R-SSC-9686980", "name": "RB1 recruits APC/C:Cdh1 complex to SKP2", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9686980", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9686980" } ] }, { "id": "R-SSC-983140", "name": "Transfer of Ub from E2 to substrate and release of E2", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-983140", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983140" } ] }, { "id": "R-SSC-983152", "name": "Transfer of ubiquitin from E1 to E2", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-983152", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983152" } ] }, { "id": "R-SSC-983156", "name": "Polyubiquitination of substrate", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-983156", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983156" } ] }, { "id": "R-SSC-983157", "name": "Interaction of E3 with substrate and E2-Ub complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-983157", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983157" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1UIJ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIJ3" }, { "id": "PS50127", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50127" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "UBC core", "eco_id": "ECO_0000259", "start_pos": 47, "end_pos": 193, "start_aa": "Thr", "end_aa": "Thr", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 138, "end_pos": 140 }, { "start_pos": 66, "end_pos": 68 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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"categories": [ "Enzyme and Pathway" ] }, { "id": "46608", "url": "https://www.rhea-db.org/rhea/46608", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1UIT6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIT6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UIT6-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIT6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1KWZ0", "url": "https://www.uniprot.org/uniprotkb/A0A8D1KWZ0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1KWZ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1KWZ0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7GKL4", "url": "https://www.uniprot.org/uniprotkb/K7GKL4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7GKL4-1", "url": "https://www.uniprot.org/uniprotkb/K7GKL4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEYMSTGSDNKEEIDLLMKHLNVSDVIDIMENLYSSEEPAVYKPSLMTMCQDSNDNEERAESLLLSGQEGPWLSSVRYGTVEDLLAFANHISNAAKRLYGHRPQESGILLNMVITPQNGRYQIDSDVLLVPWKLTYRNIGSDFIPRGAFGKVYLAQDIKTKKRMACKLIPVDQFKPSDVEIQACFRHENIAELYGAVLWGETVHLFMEAGEGGSVLEKLESCGPMREFEIIWVTKHVLKGLDFLHSKKVIHHDIKPSNIVFMSTKAVLVDFGLSVQMTEEIYFPKDLRGTEIYMSPEVILCRGHSTKADIYSLGATLIHMQTGTPPWVKRYPRSAYPSYLYIIHKQAPPLEDIAEDCSPGMRELIGAALERNPNHRPRAADLLKHEALNPPREDQPRCQSLDSALFERKRLLSRKELELPENISDTSCTGSTEESEMLKRQRSLYIDLGALAGYFNLVRGPPTLEYG", "length": 467, "header": "tr|A0A4X1UIT6-1|A0A4X1UIT6_PIG Isoform 1 of Mitogen-activated protein kinase kinase kinase 8 OS=Sus scrofa OX=9823 GN=MAP3K8 PE=3 SV=1 CANONICAL=A0A4X1UIT6-1" }, "isoforms": [ { "isoform_ac": "A0A4X1UIT6-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIT6/entry", "sequence": { "sequence": "MEYMSTGSDNKEEIDLLMKHLNVSDVIDIMENLYSSEEPAVYKPSLMTMCQDSNDNEERAESLLLSGQEGPWLSSVRYGTVEDLLAFANHISNAAKRLYGHRPQESGILLNMVITPQNGRYQIDSDVLLVPWKLTYRNIGSDFIPRGAFGKVYLAQDIKTKKRMACKLIPVDQFKPSDVEIQACFRHENIAELYGAVLWGETVHLFMEAGEGGSVLEKLESCGPMREFEIIWVTKHVLKGLDFLHSKKVIHHDIKPSNIVFMSTKAVLVDFGLSVQMTEEIYFPKDLRGTEIYMSPEVILCRGHSTKADIYSLGATLIHMQTGTPPWVKRYPRSAYPSYLYIIHKQAPPLEDIAEDCSPGMRELIGAALERNPNHRPRAADLLKHEALNPPREDQPRCQSLDSALFERKRLLSRKELELPENISDTSCTGSTEESEMLKRQRSLYIDLGALAGYFNLVRGPPTLEYG", "length": 467, "header": "tr|A0A4X1UIT6-1|A0A4X1UIT6_PIG Isoform 1 of Mitogen-activated protein kinase kinase kinase 8 OS=Sus scrofa OX=9823 GN=MAP3K8 PE=3 SV=1 CANONICAL=A0A4X1UIT6-1" }, "locus": { "chromosome": "10", "start_pos": 40737846, "end_pos": 40714851, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058548.2", "url": "https://www.ensembl.org/id/ENSSSCT00000058548.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000040859.1", "url": "https://www.ensembl.org/id/ENSSSCP00000040859.1" } ] } }, { "isoform_ac": "A0A8D1KWZ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1KWZ0/entry", "sequence": { "sequence": "MEYMSTGSDNKEEIDLLMKHLNVSDVIDIMENLYSSEEPAVYKPSLMTMCQDSNDNEERAESLLLSGQEGPWLSSVRYGTVEDLLAFANHISNAAKRLYGHRPQESGILLNMLHLMLSGFGTWFRLAATDGFLKMEFS", "length": 138, "header": "tr|A0A8D1KWZ0-1|A0A4X1UIT6_PIG Computationally mapped isoform of Mitogen-activated protein kinase kinase kinase 8 OS=Sus scrofa OX=9823 GN=MAP3K8 PE=3 SV=1 CANONICAL=A0A4X1UIT6-1" }, "locus": { "chromosome": "10", "start_pos": 40737846, "end_pos": 40737381, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079510.1", "url": "https://www.ensembl.org/id/ENSSSCT00000079510.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064885.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064885.1" } ] } }, { "isoform_ac": "K7GKL4-1", "url": "https://www.uniprot.org/uniprotkb/K7GKL4/entry", "sequence": { "sequence": "MEKAGRRRLESAAPPLGRLSLDSLGSWPGMEYMSTGSDNKEEIDLLMKHLNVSDVIDIMENLYSSEEPAVYKPSLMTMCQDSNDNEERAESLLLSGQEGPWLSSVRYGTVEDLLAFANHISNAAKRLYGHRPQESGILLNMVITPQNGRYQIDSDVLLVPWKLTYRNIGSDFIPRGAFGKVYLAQDIKTKKRMACKLIPVDQFKPSDVEIQACFRHENIAELYGAVLWGETVHLFMEAGEGGSVLEKLESCGPMREFEIIWVTKHVLKGLDFLHSKKVIHHDIKPSNIVFMSTKAVLVDFGLSVQMTEEIYFPKDLRGTEIYMSPEVILCRGHSTKADIYSLGATLIHMQTGTPPWVKRYPRSAYPSYLYIIHKQAPPLEDIAEDCSPGMRELIGAALERNPNHRPRAADLLKHEALNPPREDQPRCQSLDSALFERKRLLSRKELELPENISDTSCTGSTEESEMLKRQRSLYIDLGALAGYFNLVRGPPTLEYG", "length": 496, "header": "tr|K7GKL4-1|A0A4X1UIT6_PIG Computationally mapped isoform of Mitogen-activated protein kinase kinase kinase 8 OS=Sus scrofa OX=9823 GN=MAP3K8 PE=3 SV=1 CANONICAL=A0A4X1UIT6-1" }, "locus": { "chromosome": "10", "start_pos": 40742377, "end_pos": 40714851, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000033089.4", "url": "https://www.ensembl.org/id/ENSSSCT00000033089.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000028391.2", "url": "https://www.ensembl.org/id/ENSSSCP00000028391.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D1KWZ0", "url": "https://www.uniprot.org/uniprotkb/A0A8D1KWZ0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100622217", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622217", "resource": "KEGG Pathway" }, { "id": "R-SSC-389357", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-389357", "resource": "Reactome", "description": "CD28 dependent PI3K/Akt signaling" }, { "id": "R-SSC-5684264", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5684264", "resource": "Reactome", "description": "MAP3K8 (TPL2)-dependent MAPK1/3 activation" } ], "orthologs": [ { "uniprot_canonical_ac": "E1C848-1", "protein_name": "Mitogen-activated protein kinase kinase kinase 8", "gene_name": "MAP3K8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MISCDVTGINIRSGFAKWTVMEYMSTGSDSKEEIDLLLTNLNMSEVIDIMENLYPGGDLAVYEDSLITMCEEANQNEERAESLLFCEREVSLMSSVKYGTVEDLLAFANQVSNTAKQFKGCRQQESGILLNMITPKNGRYQIDSDVLLFPWKLTYRNIGSDFIPRGAFGKVYLAQDRETKKRMACKLVPVEQFKPSDVEIQACFRHENIAELYGAILWDETIHLFMEAGEGGSVMEKLESCGPMREFEIIWVTKHILKGLDFLHSKRIIHHDIKPSNIVFMSTKAVLVDFGLSVQMTEDIYYPKDLRGTEIYMSPEVILCRGHTTKADIYSMGATIIHMQTGIPPWVNRYPRSAYPSYLYIIHKQAPPLEDIAEDCSTSMRELLEAALERNPNHRLSAAELLKHEALHPPPEDQPRCQSLDSALFERKRLLARKELQLPENITDSSLCTGSMEESDLVKRQRSLYIDLGALAGYFNIVRAPPALEYD", "length": 487 }, "evidence": [ { "id": "A0A4X1UIT6", "url": "https://omabrowser.org/oma/group/A0A4X1UIT6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3HXQ8-1", "protein_name": "Mitogen-activated protein kinase kinase kinase 8", "gene_name": "Map3k8", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEYMSTGSDEKEEIDLLIKHLNVSEVIDIMENLYASEEPAVYEPSLMTMCPGSNQNKEHSESLLRSGQEVPWLSSVKYGTVEDLLAFANHISNTAKHFYGHRPQESGILLNMVISPQNGRYQIDSDVLLVPWKLTYRNIGSGFVPRGAFGKVYLAQDMKTKKRMACKLIPVDQFKPSDVEIQACFRHENIAELYGAILWGDTVHLFMEAGEGGSVLEKLESCGPMREFEIIWVTKHVLKGLDFLHSKKVIHHDIKPSNIVFMSTKAVLVDFGLSVQMTEDVYLPKDLRGTEIYMSPEVILCRGHSTKADIYSLGATLIHMQTGTPPWVKRYPRSAYPSYLYIIHKQAPPLEDIAGDCSPGMRELIETALERNPNHRPTAADLLKHEALNPPREDQPRCQSLDSALFERKRLLSRKELELPENIADSSCTGSTEESEALRRQRSLYIDLGALAGYFNIVRGPPTLEYG", "length": 467 }, "evidence": [ { "id": "A0A4X1UIT6", "url": "https://omabrowser.org/oma/group/A0A4X1UIT6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P41279-1", "protein_name": "Mitogen-activated protein kinase kinase kinase 8", "gene_name": "MAP3K8", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEYMSTGSDNKEEIDLLIKHLNVSDVIDIMENLYASEEPAVYEPSLMTMCQDSNQNDERSKSLLLSGQEVPWLSSVRYGTVEDLLAFANHISNTAKHFYGQRPQESGILLNMVITPQNGRYQIDSDVLLIPWKLTYRNIGSDFIPRGAFGKVYLAQDIKTKKRMACKLIPVDQFKPSDVEIQACFRHENIAELYGAVLWGETVHLFMEAGEGGSVLEKLESCGPMREFEIIWVTKHVLKGLDFLHSKKVIHHDIKPSNIVFMSTKAVLVDFGLSVQMTEDVYFPKDLRGTEIYMSPEVILCRGHSTKADIYSLGATLIHMQTGTPPWVKRYPRSAYPSYLYIIHKQAPPLEDIADDCSPGMRELIEASLERNPNHRPRAADLLKHEALNPPREDQPRCQSLDSALLERKRLLSRKELELPENIADSSCTGSTEESEMLKRQRSLYIDLGALAGYFNLVRGPPTLEYG", "length": 467 }, "evidence": [ { "id": "A0A4X1UIT6", "url": "https://omabrowser.org/oma/group/A0A4X1UIT6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q07174-1", "protein_name": "Mitogen-activated protein kinase kinase kinase 8", "gene_name": "Map3k8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEYMSTGSDEKEEIDLLIKHLNVSEVIDIMENLYASEEPGVYEPSLMTMYPDSNQNEERSESLLRSGQEVPWLSSVRYGTVEDLLAFANHVSNMTKHFYGRRPQECGILLNMVISPQNGRYQIDSDVLLVPWKLTYRNIGSGFVPRGAFGKVYLAQDMKTKKRMACKLIPIDQFKPSDVEIQACFRHENIAELYGAVLWGDTVHLFMEAGEGGSVLEKLESCGPMREFEIIWVTKHILKGLDFLHSKKVIHHDIKPSNIVFMSTKAVLVDFGLSVKMTEDVYLPKDLRGTEIYMSPEVILCRGHSTKADIYSLGATLIHMQTGTPPWVKRYPRSAYPSYLYIIHKQAPPLEDIAGDCSPGMRELIEAALERNPNHRPKAADLLKHEALNPPREDQPRCQSLDSALFERKRLLSRKELQLPENIADSSCTGSTEESEVLRRQRSLYIDLGALAGYFNIVRGPPTLEYG", "length": 467 }, "evidence": [ { "id": "A0A4X1UIT6", "url": "https://omabrowser.org/oma/group/A0A4X1UIT6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q63562-1", "protein_name": "Mitogen-activated protein kinase kinase kinase 8", "gene_name": "Map3k8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEYMSTGSDEKEEIDLLINHLNVSEVLDIMENLYASEEPAVYEPSLMTMCPDSNQNKEHSESLLRSGQEVPWLSSVRYGTVEDLLAFANHISNTTKHFYRCRPQESGILLNMVISPQNGRYQIDSDVLLVPWKLTYRSIGSGFVPRGAFGKVYLAQDMKTKKRMACKLIPVDQFKPSDVEIQACFRHENIAELYGAVLWGDTVHLFMEAGEGGSVLEKLESCGPMREFEIIWVTKHVLKGLDFLHSKKVIHHDIKPSNIVFMSTKAVLVDFGLSVQMTEDVYLPKDLRGTEIYMSPEVILCRGHSTKADIYSLGATLIHMQTGTPPWVKRYPRSAYPSYLYIIHKQAPPLEDIAGDCSPGMRELIEAALERNPNHRPKAADLLKHEALNPPREDQPRCQSLDSALFDRKRLLSRKELELPENIADSSCTGSTEESEVLRRQRSLYIDLGALAGYFNIVRGPPTLEYG", "length": 467 }, "evidence": [ { "id": "A0A4X1UIT6", "url": "https://omabrowser.org/oma/group/A0A4X1UIT6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIT6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIT6" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIT6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIT6" } ], "pmid": "" }, { "name": "MAP kinase kinase kinase activity", "id": "GO:0004709", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004709", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIT6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIT6" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIT6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIT6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIT6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIT6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "MAPK cascade", "id": "GO:0000165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000165", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIT6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIT6" } ], "pmid": "" }, { "name": "immune system process", "id": "GO:0002376", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002376", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIT6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIT6" } ], "pmid": "" }, { "name": "positive regulation of inflammatory response", "id": "GO:0050729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050729", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIT6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIT6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 22, "end_pos": 24, "annotation": "n_glycosylation_sequon" }, { "start_pos": 422, "end_pos": 424, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "17989", "name": "", "equation": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "17989", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/17989" } ] }, { "id": "46608", "name": "", "equation": "L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "46608", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/46608" } ] }, { "id": "R-SSC-392530", "name": "p-S400-Cot phosphorylates NIK", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [ "R-SSC-168187" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-392530", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-392530" } ] }, { "id": "R-SSC-451634", "name": "NFKB p105, TPL2 (COT) and ABIN2 form a stable complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-451634", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-451634" } ] }, { "id": "R-SSC-5684261", "name": "MAP3K8 is phosphorylated", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5684261", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5684261" } ] }, { "id": "R-SSC-5684267", "name": "IKBKB phosphorylates NFkB p105 within the NFkB p105:TPL2:ABIN2 complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5684267", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5684267" } ] }, { "id": "R-SSC-5684273", "name": "3xUb,p-S-NFkB p105:TPL2:ABIN2 dissociates due to degradation of p105", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5684273", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5684273" } ] }, { "id": "R-SSC-5684275", "name": "IKBKB phosphorylates TPL2 (MAP3K8) at Ser400", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5684275", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5684275" } ] } ], "reaction_participants": [ { "participant_id": "R-SSC-168187", "participant_name": "phospho-p-MAP3K14 [cytosol]", "crossref": [ { "id": "ENSSSCT00000018866", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCG00000017330", "database": "ENSEMBL", "url": "" }, { "id": "F1RR25", "database": "UniProt", "url": "" }, { "id": "98105", "database": "VGNC", "url": "" }, { "id": "ENSSSCP00000018362", "database": "ENSEMBL", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1UIT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIT6" }, { "id": "PS50011", "database": 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"tr|A0A4X1UIT7-1|A0A4X1UIT7_PIG Isoform 1 of LUC7 like OS=Sus scrofa OX=9823 GN=LUC7L PE=1 SV=1 CANONICAL=A0A4X1UIT7-1" }, "locus": { "chromosome": "3", "start_pos": 41470776, "end_pos": 41449005, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065950.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065950.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041412.2", "url": "https://www.ensembl.org/id/ENSSSCP00000041412.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIT7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIT7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "U1 snRNP", "id": "GO:0005685", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005685", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIT7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIT7" } ], "pmid": "" }, { "name": "U2-type prespliceosome", "id": "GO:0071004", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071004", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIT7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIT7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIT7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIT7" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIT7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIT7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "mRNA splice site recognition", "id": "GO:0006376", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006376", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIT7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIT7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1UIY4-1", "uniprot_ac": "A0A4X1UIY4", "uniprot_id": "A0A4X1UIY4_PIG", "mass": { "chemical_mass": 171548.0, "monoisotopic_mass": 171548.0 }, "refseq": { "ac": "XP_020953930", "name": "intron-binding protein aquarius isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020953930" }, "gene_names": [ { "name": "AQR", "type": "recommended", "evidence": [ { "id": "A0A4X1UIY4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4" } ] }, { "name": "AQR", "type": "synonym", "evidence": [ { "id": "XP_020953930", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020953930" } ] } ], "protein_names": [ { "name": "RNA helicase aquarius", "type": "recommended", "evidence": [ { "id": "A0A4X1UIY4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4/entry#names_and_taxonomy" } ] }, { "name": "intron-binding protein aquarius isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020953930", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020953930" } ] } ], "function": [ { "annotation": "Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre-mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIY4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4#function" }, { "database": "UniProtKB", "id": "PIRNR038901", "url": "https://www.uniprot.org/uniprotkb/PIRNR038901#function" }, { "database": "UniProtKB", "id": "A0A4X1UNE5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UNE5#function" }, { "database": "UniProtKB", "id": "A0A5G2R2K0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2K0#function" }, { "database": "UniProtKB", "id": "A0A5G2R4Q8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4Q8#function" } ] }, { "annotation": "Involved in pre-mRNA splicing as component of the spliceosome. Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre-mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. Has ATP-dependent RNA helicase activity and can unwind double-stranded RNA molecules with a 3' overhang (in vitro).", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIY4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4#function" }, { "database": "UniProtKB", "id": "ARBA00057313", "url": "https://www.uniprot.org/uniprotkb/ARBA00057313#function" }, { "database": "UniProtKB", "id": "A0A4X1UNE5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UNE5#function" }, { "database": "UniProtKB", "id": "A0A5G2R2K0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2K0#function" }, { "database": "UniProtKB", "id": "A0A5G2R4Q8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4Q8#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIY4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "AQR", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4", "locus": { "chromosome": "1", "start_pos": 136233825, "end_pos": 136121111, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004802", "url": "https://www.ensembl.org/id/ENSSSCG00000004802" } ] } } ], "crossref": [ { "id": "ENSSSCG00000004802", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004802", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd17935", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd17935", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd18808", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18808", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100738040", "url": "https://www.ncbi.nlm.nih.gov/gene/100738040", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR026300", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026300", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032174", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032174", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041677", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041677", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041679", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041679", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045055", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045055", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047187", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047187", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048966", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048966", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048967", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048967", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100738040", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100738040", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YRVWLDC", "url": "https://omabrowser.org/oma/group/YRVWLDC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1UIY4", "url": "https://www.orthodb.org/?gene=A0A4X1UIY4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10887", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10887", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10887:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10887:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13086", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13086", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13087", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13087", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16399", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16399", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21143", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21143", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21144", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21144", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6781823", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6781823", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-6782135", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782135", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-6782210", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782210", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-72163", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72163", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020953930", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020953930", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "13065", "url": "https://www.rhea-db.org/rhea/13065", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1UIY4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UIY4-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UNE5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UNE5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UNE5-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UNE5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2K0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2K0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2K0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2K0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R4Q8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4Q8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R4Q8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4Q8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTAPAQPKKIVAPTVSQINAEFVTQLACKYWAPHIKKKSPFDIKVIEDIYEKEIVKSRFAIRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWETFKKKPDHFPFFFKCILKAALAETDGEFSLHEQTVLLLFLDHCFNSLEVDLIRSQVQQLISLPMWMGLQPARLELELKKTPKLRKFWNLIKKNDEKMDPEAREQAYQERKFLSQLIQKFISVLKSVPLSDPVTMDKVHYCERFIELMIDLEALLPTRRWFNTILDDSHLLVHCYLSNLVHREEDGHLFSQLLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAEVDTRESLVKFFGPLSSNTLHQVASYLCLLPTLPKAEDTTFDKEFLLELLVSRHERRISQIQQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDIEDSVSRMKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPNIGENWPTRVRADVTINLNVRDHIKDEWEGLRKHDVCFLITVRPTKPYGTKFDRRRPFIEQVGLVYVRGCEIQGMLDDKGRVIEDGPEPRPNLRGESRTFRVFLDPNQYQQDMTNTIQNGAEDVYETFNIIMRRKPKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFNDTFLSIEHLKASFPGHNVKVTVDDPALQIPPFRITFPVRSGKGKKRKDADGEDEDTEEAKTLIVEPHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNYVLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGNTLPNVTEVSTFFPFHEYFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTRAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAFSQLTARPLHLHIIPTEPFPTSRKNGERPSHEVQIIKNMPQMANFVYNMYMHLIQTTHHYHQTLLQLPPAMVEEGEEVQSQDTELETEEEAMPAPADIMPTLMDASSSQEASASQTEPTSNETETTSSQTGADSNPEATPAESKITATAAGPVATPAENNTPPDATSAPGETK", "length": 1492, "header": "tr|A0A4X1UIY4-1|A0A4X1UIY4_PIG Isoform 1 of RNA helicase aquarius OS=Sus scrofa OX=9823 GN=AQR PE=1 SV=1 CANONICAL=A0A4X1UIY4-1" }, "isoforms": [ { "isoform_ac": "A0A4X1UIY4-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4/entry", "sequence": { "sequence": "MTAPAQPKKIVAPTVSQINAEFVTQLACKYWAPHIKKKSPFDIKVIEDIYEKEIVKSRFAIRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWETFKKKPDHFPFFFKCILKAALAETDGEFSLHEQTVLLLFLDHCFNSLEVDLIRSQVQQLISLPMWMGLQPARLELELKKTPKLRKFWNLIKKNDEKMDPEAREQAYQERKFLSQLIQKFISVLKSVPLSDPVTMDKVHYCERFIELMIDLEALLPTRRWFNTILDDSHLLVHCYLSNLVHREEDGHLFSQLLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAEVDTRESLVKFFGPLSSNTLHQVASYLCLLPTLPKAEDTTFDKEFLLELLVSRHERRISQIQQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDIEDSVSRMKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPNIGENWPTRVRADVTINLNVRDHIKDEWEGLRKHDVCFLITVRPTKPYGTKFDRRRPFIEQVGLVYVRGCEIQGMLDDKGRVIEDGPEPRPNLRGESRTFRVFLDPNQYQQDMTNTIQNGAEDVYETFNIIMRRKPKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFNDTFLSIEHLKASFPGHNVKVTVDDPALQIPPFRITFPVRSGKGKKRKDADGEDEDTEEAKTLIVEPHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNYVLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGNTLPNVTEVSTFFPFHEYFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTRAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAFSQLTARPLHLHIIPTEPFPTSRKNGERPSHEVQIIKNMPQMANFVYNMYMHLIQTTHHYHQTLLQLPPAMVEEGEEVQSQDTELETEEEAMPAPADIMPTLMDASSSQEASASQTEPTSNETETTSSQTGADSNPEATPAESKITATAAGPVATPAENNTPPDATSAPGETK", "length": 1492, "header": "tr|A0A4X1UIY4-1|A0A4X1UIY4_PIG Isoform 1 of RNA helicase aquarius OS=Sus scrofa OX=9823 GN=AQR PE=1 SV=1 CANONICAL=A0A4X1UIY4-1" }, "locus": { "chromosome": "1", "start_pos": 136233535, "end_pos": 136136087, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040622.2", "url": "https://www.ensembl.org/id/ENSSSCT00000040622.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031234.1", "url": "https://www.ensembl.org/id/ENSSSCP00000031234.1" } ] } }, { "isoform_ac": "A0A4X1UNE5-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UNE5/entry", "sequence": { "sequence": "MTAPAQPKKIVAPTVSQINAEFVTQLACKYWAPHIKKKSPFDIKVIEDIYEKEIVKSRFAIRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWETFKKKPDHFPFFFKCILKAALAETDGEFSLHEQTVLLLFLDHCFNSLEVDLIRSQVQQLISLPMWMGLQPARLELELKKTPKLRKFWNLIKKNDEKMDPEAREQAYQERKFLSQLIQKFISVLKSVPLSDPVTMDKVHYCERFIELMIDLEALLPTRRWFNTILDDSHLLVHCYLSNLVHREEDGHLFSQLLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAEVDTRESLVKFFGPLSSNTLHQVASYLCLLPTLPKAEDTTFDKEFLLELLVSRHERRISQIQQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDIEDSVSRMKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPNIGENWPTRVRADVTINLNVRDHIKDEWEGLRKHDVCFLITVRPTKPYGTKFDRRRPFIEQVGLVYVRGCEIQGMLDDKGRVIEDGPEPRPNLRGESRTFRVFLDPNQYQQDMTNTIQNGAEDVYETFNIIMRRKPKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFNDTFLSIEHLKASFPGHNVKVTVDDPALQIPPFRITFPVRSGKGKKRKDADGEDEDTEEAKTLIVEPHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNYVLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTRAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAFSQLTARPLHLHIIPTEPFPTSRKNGERPSHEVQIIKNMPQMANFVYNMYMHLIQTTHHYHQTLLQLPPAMVEEGEEVQSQDTELETEEEAMPAPADIMPTLMDASSSQEASASQTEPTSNETETTSSQTGADSNPEATPAESKITATAAGPVATPAENNTPPDATSAPGETK", "length": 1463, "header": "tr|A0A4X1UNE5-1|A0A4X1UNE5_PIG Computationally mapped isoform of RNA helicase aquarius OS=Sus scrofa OX=9823 GN=AQR PE=1 SV=1 CANONICAL=A0A4X1UIY4-1" }, "locus": { "chromosome": "1", "start_pos": 136233535, "end_pos": 136136087, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005301.4", "url": "https://www.ensembl.org/id/ENSSSCT00000005301.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005171.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005171.3" } ] } }, { "isoform_ac": "A0A5G2R2K0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2K0/entry", "sequence": { "sequence": "MTAPAQPKKIVAPTVSQINAEFVTQLACKYWAPHIKKKSPFDIKVIEDIYEKEIVKSRFAIRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWETFKKKPDHFPFFFKCILKAALAETDGEFSLHEQTVLLLFLDHCFNSLEVDLIRSQVQQLISLPMWMGLQPARLELELKKTPKLRKFWNLIKKNDEKMDPEAREQAYQERKFLSQLIQKFISVLKSVPLSDPVTMDKVHYCERFIELMIDLEALLPTRRWFNTILDDSHLLVHCYLSNLVHREEDGHLFSQLLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAEVDTRESLVKFFGPLSSNTLHQVASYLCLLPTLPKAEDTTFDKEFLLELLVSRHERRISQIQQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDIEDSVSRMKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPNIGENWPTRVRADVTINLNVRDHIKDEWEGLRKHDVCFLITVRPTKPYGTKFDRRRPFIEQVGLVYVRGCEIQGMLDDKGRVIEDGPEPRPNLRGESRTFRVFLDPNQYQQDMTNTIQNGAEDVYETFNIIMRRKPKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFNDTFLSIEHLKASFPGHNVKVTVDDPALQIPPFRITFPVRSGKGKKRKDADGEDEDTEEAKTLIVEPHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNYVLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGNTLPNVTEVSTFFPFHEYFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTRAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAFSQLTARPLHLHIIPTEPFPTSRKNGERPSHEVQIIKNMPQMANFVYNMYMHLIQTTHHYHQTLLQLPPAMVEEGEEVQSQDTELETEEEAMPAPADIMPTLMDASSSQEASASQTETTSSQTGADSNPEATPAESKITATAAGPVATPAENNTPPDATSAPGETK", "length": 1485, "header": "tr|A0A5G2R2K0-1|A0A4X1UIY4_PIG Computationally mapped isoform of RNA helicase aquarius OS=Sus scrofa OX=9823 GN=AQR PE=1 SV=1 CANONICAL=A0A4X1UIY4-1" }, "locus": { "chromosome": "1", "start_pos": 136233535, "end_pos": 136136087, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072779.1", "url": "https://www.ensembl.org/id/ENSSSCT00000072779.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071324.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071324.1" } ] } }, { "isoform_ac": "A0A5G2R4Q8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4Q8/entry", "sequence": { "sequence": "MTAPAQPKKIVAPTVSQINAEFVTQLACKYWAPHIKKKSPFDIKVIEDIYEKEIVKSSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWETFKKKPDHFPFFFKCILKAALAETDGEFSLHEQTVLLLFLDHCFNSLEVDLIRSQVQQLISLPMWMGLQPARLELELKKTPKLRKFWNLIKKNDEKMDPEAREQAYQERKFLSQLIQKFISVLKSVPLSDPVTMDKVHYCERFIELMIDLEALLPTRRWFNTILDDSHLLVHCYLSNLVHREEDGHLFSQLLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAEVDTRESLVKFFGPLSSNTLHQVASYLCLLPTLPKAEDTTFDKEFLLELLVSRHERRISQIQQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDIEDSVSRMKPWLSEYGGVVFGGWARMAQPIVAFTVVEVAKPNIGENWPTRVRADVTINLNVRDHIKDEWEGLRKHDVCFLITVRPTKPYGTKFDRRRPFIEQVGLVYVRGCEIQGMLDDKGRVIEDGPEPRPNLRGESRTFRVFLDPNQYQQDMTNTIQNGAEDVYETFNIIMRRKPKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFNDTFLSIEHLKASFPGHNVKVTVDDPALQIPPFRITFPVRSGKGKKRKDADGEDEDTEEAKTLIVEPHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNYVLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGNTLPNVTEVSTFFPFHEYFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTRAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAFSQLTARPLHLHIIPTEPFPTSRKNGERPSHEVQIIKNMPQMANFVYNMYMHLIQTTHHYHQTLLQLPPAMVEEGEEVQSQDTELETEEEAMPAPADIMPTLMDASSSQEASASQTEPTSNETETTSSQTGADSNPEATPAESKITATAAGPVATPAENNTPPDATSAPGETK", "length": 1480, "header": "tr|A0A5G2R4Q8-1|A0A4X1UIY4_PIG Computationally mapped isoform of RNA helicase aquarius OS=Sus scrofa OX=9823 GN=AQR PE=1 SV=1 CANONICAL=A0A4X1UIY4-1" }, "locus": { "chromosome": "1", "start_pos": 136233535, "end_pos": 136136087, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000086064.1", "url": "https://www.ensembl.org/id/ENSSSCT00000086064.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072198.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072198.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1458, "start_aa": "Thr", "end_pos": 1458, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1458", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1474, "start_aa": "Thr", "end_pos": 1474, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1474", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2K0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2K0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100738040", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100738040", "resource": "KEGG Pathway" }, { "id": "R-SSC-6781823", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6781823", "resource": "Reactome", "description": "Formation of TC-NER Pre-Incision Complex" }, { "id": "R-SSC-6782135", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782135", "resource": "Reactome", "description": "Dual incision in TC-NER" }, { "id": "R-SSC-6782210", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782210", "resource": "Reactome", "description": "Gap-filling DNA repair synthesis and ligation in TC-NER" }, { "id": "R-SSC-72163", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72163", "resource": "Reactome", "description": "mRNA Splicing - Major Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1MP16-1", "protein_name": "RNA helicase aquarius", "gene_name": "AQR", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTAPAQPKKIVAPTVSQINAEFVTQLACKYWAPHIKKKSPFDIKVIEDIYEKEIVKSRFAIRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWETFKKKPDHFPFFFKCILKAALAETDGEFSLHEQTVLLLFLDHCFNSLEVDLIRSQVQQLISLPMWMGLQPARLELELKKTPKLRKFWNLIKKNDEKMDPEAREQAYQERRFLSQLIQKFISVLKSVPLSDPVTMDKVHYCERFIELMIDLEALLPTRRWFNTILDDSHVLVHCYLSNLVRREEDGHLFSQLLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAEVDTRESLVKFFGPLSSNTLHQVASYLCLLPTLPKAEDTTFDKGFLLELLVSRHERRISQIQQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDIEDSVSRMKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPNIGENWPTRVRADVTINLNVRDHIKDEWEGLRKHDVCFLITVRPTKPYGTKFDRRRPFIEQVGLVYVRGCEIQGMLDDKGRVIEDGPEPRPSLRGESRTFRVFLDPNQYQQDMTNTIQNGAEDVYETFNVIMRRKPKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFNDTFLSIEHLKASFPGHNVKVTVDDPALQIPPFRITFPVRSGKGKKRKDVDGEDEDTEEAKTLIVEPHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNYVLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKSNTMPDITEVSAFFPFHEYFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYNWRYKNLGNLPHVQLLLEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTRAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAFSQLTARPLHLHIIPTEPFPTSRKNGERPSHEVQIIKNMPQMANFVYNMYMHLIQTTHHYHQTLLQLPPAMVEESEEVQSQETELETEEEAMSAQADIVPDEATDASSSQETSASETETTPNQTGASSSPEAIPAESEITGTGPVTVPSENNTPHDVTSTPGETE", "length": 1484 }, "evidence": [ { "id": "A0A4X1UIY4", "url": "https://omabrowser.org/oma/group/A0A4X1UIY4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8C2MRH8-1", "protein_name": "RNA helicase aquarius", "gene_name": "Aqr", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAAPAQPKKIVAPTVSQINAEFVTQLACKYWAPHIKKKSPFDIKVIEEIYEKEIVKSRFAIRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWETFKKKPDHFPFFFKCILKAALAETDGEFSLHEQTVLLLFLDHCFNSLEVDLIRSQVQQLISLPMWMGLQPARLELELKKTPKLRKFWNLIKKNDEKMDPEAREQAYQERRFLSQLIQKFISVLKSIPLSEAVTMDKVHYCERFIELMIDLEALLPTRRWFNTILDDSHLLVHCYLSSLVHREEDGHLFSQLLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAEVDARDSLVKFFGPLSSNTLHQVASYLCLLPTLPKNEDTTFDKEFLLELLVSRHERRISQIQQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDIEDSVSRMKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPNIGENWPTRVRADVTINLNVRDHIKDEWEGLRKHDVCFLITVRPTKPYGTKFDRRRPFIEQVGLVYVRGCEIQGMLDDKGRVIEDGPEPRPNLRGESRTFRVFLDPNQYQQDMTNTIQNGAEDVYDTFNVIMRRKPKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFNDTFLSIEHLKASFPGHNVKVTVNDPALQIPPFRITFPVRSGKGKKRKDADGEEDDIEEAKTLIVEPHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNYVLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISRVKNTGSTSPDAAEVASFFPFHEYFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTRAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAFSQLTARPLHLHIIPTEPFPTSRKNGERPPHEVQVIKNMPQMANFVYNMYMHLIQTTHHYHQTFLQLPPAMVEEGEEVQSQETEMEAEEETMTAQANIIPSPAEASLSQETPASQPESSNQTEAASSEMEDISALCDTAAAAEPVSAAAGASTLEGAASVPAETR", "length": 1484 }, "evidence": [ { "id": "A0A4X1UIY4", "url": "https://omabrowser.org/oma/group/A0A4X1UIY4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8V0XHD1-1", "protein_name": "RNA helicase aquarius", "gene_name": "AQR", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEAALVPAPRPGTASRRGAFPFPSVPARSGPRATARVAEAAALPGAGGVMAAPAASAAPPKKIVAPTVSQINAEFVTQLANKYWAPHAKKKLSFDSKVIEDVYAKEIVKSKFAIRKIMLLEFSQYLENYLWMNYSPKVSSKAYLMSICCMVNEKFRENVPAWETFKKKSEHFPFFFKCILEASLVENDNEFSLHEQTILLLFLDHCFNSLEVDLIRGQVQQLISLPMWMALQPKRLEQELKKTPKLRKFWNLIKKNDEKMDEEARMQAYRERRFLSQLIQKFISVLKSIPVSGPISMDKVHYCERFIELMIDLEALLPTRRWFNTVLDDSHLVVHCYLSSLAKREKEGHLFCQLLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAAVDTRDALVKLFGPLSSNMLHQVASYLCLLPSLPEGNDTSYEKEFLLELLVSRHERRISQIQQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDIEDSVSRMKPWLSEYGGVVFGGWARMAQPIVSFTVVEVAKPNIGENWPMRVRADVTINLNVRDSIKDEWEGLRKHDVCFLVTVRPTQPYGTKFDRRRPFVEQTGLVYVRGCEIQGMLDEKGRVIEEGPEPKPRLKGDCRTYRVFLDPNQYQQDMTNTIQNGAEDVYETFNIIMRRKPKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIASLDFNDTFLSIDHLKASFPGYNIKVTVDNPELQVPPFRITFPITGGRGKKRKEDENEEKSEEAKTLIVEPHIIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNLYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNYVLARRLELLREVGRLQESLGVPGDVSYTCETAGHFFLYQVMSRWEEYISKVKVKGGKLPDVTDVSSFFPFHQYFANAPQPIFRGRSYEEDMEIAEGCFRHLKKIFTQLEEFRAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEESAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYNWRYKNLGNLPHVQLMPEFRTANAGFLYDFQLINVEDFNGVGESEPNPYFYQNLGEAEYVVAVFMYMCLLGYPADRISILTTYNGQKHLIRDVINQRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTKAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAFSQLTARPLHLHIIPTECFPAARQNGEPPAHQIHVIKNMPQMANFVYNMYMHMIQSTRHYQQRLLPPPAMVEEPETTQTQESEAEVEVHGIREDAEENKVEEVVVKEEELKASEVDEHRTMPEHPGRDSDSEDSEPEDENEK", "length": 1513 }, "evidence": [ { "id": "A0A4X1UIY4", "url": "https://omabrowser.org/oma/group/A0A4X1UIY4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "O60306-1", "protein_name": "RNA helicase aquarius", "gene_name": "AQR", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAPAQPKKIVAPTVSQINAEFVTQLACKYWAPHIKKKSPFDIKVIEDIYEKEIVKSRFAIRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWEIFKKKPDHFPFFFKHILKAALAETDGEFSLHEQTVLLLFLDHCFNSLEVDLIRSQVQQLISLPMWMGLQLARLELELKKTPKLRKFWNLIKKNDEKMDPEAREQAYQERRFLSQLIQKFISVLKSVPLSEPVTMDKVHYCERFIELMIDLEALLPTRRWFNTILDDSHLLVHCYLSNLVRREEDGHLFSQLLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAEVDTRESLVKFFGPLSSNTLHQVASYLCLLPTLPKNEDTTFDKEFLLELLVSRHERRISQIQQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDIEDSVSRMKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPNIGENWPTRVRADVTINLNVRDHIKDEWEGLRKHDVCFLITVRPTKPYGTKFDRRRPFIEQVGLVYVRGCEIQGMLDDKGRVIEDGPEPRPNLRGESRTFRVFLDPNQYQQDMTNTIQNGAEDVYETFNIIMRRKPKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFNDTFLSIEHLKASFPGHNVKVTVEDPALQIPPFRITFPVRSGKGKKRKDADVEDEDTEEAKTLIVEPHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNYVLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGSTLPDVTEVSTFFPFHEYFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTRAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAFSQLTARPLHLHIIPTEPFPTTRKNGERPSHEVQIIKNMPQMANFVYNMYMHLIQTTHHYHQTLLQLPPAMVEEGEEVQNQETELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDATSAPEETK", "length": 1485 }, "evidence": [ { "id": "A0A4X1UIY4", "url": "https://omabrowser.org/oma/group/A0A4X1UIY4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q555Z2-1", "protein_name": "Intron-binding protein aquarius", "gene_name": "aqr", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVGNNKSNKHGTDNEENDDNRKKQKLDNNSNNSVSSNKLTLSEVLSDEITKLSKQQWLKEVNTKTFDSNLVEKIYKDEMLKSDQRVQLLELSHYLENYLWPNFNKTTSTNKYHIMSILMMVNEKSKEGLNSFQTFHSKSSSSSDDNSEQEESSPSSSFKNLFESLLQIDLSELTDIEKCNFIKFFINAFQNVEDVLVRNECLKIVSYPIWLHLSSGRFQQESQSLSEPLEKKLRLFKKKIEKLSNNNSNSIEIKYSNFLLDLMKQFIESLNNLERLKSSNFTQFKESLNYCERFLEFMIDLMTQITTRRFFFALFDDFHFILKTSQSEFLKSNDDKSKSVLEGLLGILKVYYNFDIDNFTGEELTKDQATGIHYQNIQELQKIVFKNFPEIKEIALRNVSFVESKSDLLNIISTLSQERLNELSLVLMKYKKKESVIEQSINRVSLYPTEKLLWNETAIPNTNYNNEKALPLPKLNLQFLSFNDYLMRNFVLIRLESAYEIREDIQDSVKRLSPKFIQSNTNTTNNNKTTFTGWSRMSLQLSTPFKIINVQPPIIGEIKPKQVIGVVNISTSSCKPHIRDEWNSIKEHDILFLITIQLNNNNTNNTNTNNNNFSDIVKHVRGCEVIEIIDNNNNNLNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKNSNNKNNNNNNNNYNNYSKAFKVSLDTNQYQEDLESSSLKLYDTFNIVVRRNPKENNFKAVLDTITSLFNCKDYLPDWFSSIFLGYPSSNNNSNNNNEGEEKKENEFILFNDTFLNLNHINKVYNDKTIEITDKLKEEQENNNNNNNNFKIKFNNENNSILVDTYNNNNDNNNNNNNIIIKKENLEEIKRNKIEFTSKQIEAISSGMKRDNLTLIVGPPGTGKTDIAVQIISNIYHSSPNERTLIITHSNQALNQLFEKIYRLDINERYLLRLGHGQKQLSSTNSTQKDFTKTGRIDFWLDLRLKKLDQVDKLAKSISVTDDVSYTCDTALHFFSYHILSRFEKFQYDLSLLQDDDDGDEKKIKFIKENYPFKKFFIENSILKNDKLFDTTTTTTSVDNHHQSLLNIKKNLIELWNYIKEIFKELEECKVFELLKSPNDRYNYLLLKQSKIVAMTCTHAALKRNELLRLGFKFDNLLMEESAQISDIESFIPLQLQLNSNEIGDAIIGVDGDDNGNGNGNNISRGLKRVILIGDHNQLPPIVQNQSLAKYSHFDQSLFTRLIRLEIPHITLDRQGRSRPSISELFSWKYKGLQDLPLVKEQLQFKLANPGLAYDYQLINVDESDGYGVGESEPTPYFYQNLGEAEYIVAMFQYLIAIGYPSEKITVLTTYNGQKNLLRDVFKAKCTPQDPKKTQYGLPLKITTIDKYQGQQNDIILLSLVRTKQYGHIRDVRRLIVAMSRARLGLYIFCKKQFFQNCYETSMVFSKLLKRPDKLIIIKSEQYPITSENARQINSKLDENDCFEIQNSFHMKSLVESNE", "length": 1487 }, "evidence": [ { "id": "A0A4X1UIY4", "url": "https://omabrowser.org/oma/group/A0A4X1UIY4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q7KSN8-1", "protein_name": "RNA helicase aquarius", "gene_name": "salsa", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MKRRSQTRAEQAVPPAKTTKENSGSLTVSQLSSDVIWQLASQYWTPDTKADHLPYSAKIIERIYNEEIGDGGGHSARRINMLEFSQYLEQYLWPHYQRETATHAHLMSIVIMANEKFRERVEVWTVFEKLPDQYPAFFRHVLESCLPSKKAKEASSTLRERTALLMFINHCFNSMEIELCREQAKRLVSLSMWHCLQPRRREQELREVPEWRKYWKRLLKKEKDSKPEVLWERHFMQNLIIDFLHILESIPAEGEVPRNVVHYCERFLEFIIDLEALLPTRRFFNTVLDDCHLIVRALLSPLVRREEGKLFGQLLDMLKFYTRFEINDVTGSSLTDHDMTQLHYKKITSLQRAVFAKFPSLRVFALSNVATVDNRESLEQHFGGLDGKGLLQIATFLNLVPEEVVSPLDWHRVDEQFLRELLITRHERRCSQLEALNEMPLYPTEQIIWDENVVPSEYYSGDSCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDIEDAVSRMLPWKSEDGDVVFGGWARMALPIASFAVVEVAKPHLGEKKPSRVRADVGVTLSVRREIKAEWENLRKHDVCFLITVKPTQPYGTKYKHREPFVPQVGLVSVRGCEVEGMLDANGRVIEDGPEPRPQLQGENRCYRVWLDSNQYRLDMDDLQEGADDVYESFNILMRRKPKENNFKAVLETIRHLMNTECVVPPWLHDILLGYGDPGAAHYSNMPNQERSLEFNDTFMDYNHLEASFPQYNLKCEVPVENRQPPFRLIFEDVPIQKESDGEDPEEKPEEKLTKSILVQPYKYEARGPYPSDKPKQNSIRFTPTQVEAIRAGMQPGLTLVVGPPGTGKTDVAVQIISNIYHNHPNQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALETEKDYSRYGRVNYVLAKRMDLLSQVQKLQEALGVSGDNAYTCETAGYFYLYNVMARWEKFQSQISVHKGEADAEKLRAEFEKEFPFGKFFADAPQPLFKGANYDELMDIACSNFRYISDIFNELEEFRAFELLRTGLDRSKYLLVKEAKIIAMTCTHAALKRKELVNLGFRYDNILMEESAQILEIETFIPLLLQNPLDGLNRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRLVRLGVPTVDLDGQGRARASICSLYKWRYKKLEDLQHIFERDEYKQANPGFVHDYQLINVEDFKGVGESEPNPYFYQNLAEAEYIVAVYMYMRLLGYPAAKISILTTYNGQKHLIRDVINARCGNNPLIGWPHKITTVDKYQGQQNDYILISLVRTKAVGHLRDVRRLVVAMSRARLGLYVFGRVSLFKNCLELQQTFKLLTQRPLKLSLVPEDKFPTDRLASAAVASQDIKTVENMSEMAQFVYERYMAKMEELKGTLPSEEELEAMRNQLLQEDEESVPEASEEPPEKRAAKEEPLSKKKTTEAFKPTPILNEINVDDTEMGQREQIEEEATDQDKTQESAPAEES", "length": 1486 }, "evidence": [ { "id": "A0A4X1UIY4", "url": "https://omabrowser.org/oma/group/A0A4X1UIY4/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q8CFQ3-1", "protein_name": "RNA helicase aquarius", "gene_name": "Aqr", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAPAQPKKIVAPTVSQINAEFVTQLACKYWAPHIKKKSPFDIKVIEEIYEKEIVKSRFAIRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWETFKKKPDHFPFFFKCILKAALAETDGEFSLHEQTLLLLFLDHCFNSLEVDLIRSQVQQLISLPMWMGLQPARLELELKKTPKLRKFWNLIKKNDEKMDPEAREQAYQERRFLSRLIQKFISVLKSIPLSEPVTMDKVHYCERFIELMIDLEALLPTRRWFNTILDDSHLLVHCYLSSLVHREEDGHLFSQLLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAEVDARDSLVKFFGPLSSNTLHQVASYLCLLPTLPKNEDTTFDKEFLLELLVSRHERRISQIQQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDIEDSVSRMKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPNIGENWPTRVRADVTINLNVRDHIKDEWEGLRKHDVCFLITVRPTKPYGTKFDRRRPFIEQVGLVYVRGCEIQGMLDDKGRVIEDGPEPRPNLRGESRTFRVFLDPNQYQQDMTNTIQNGAEDVYDTFNVIMRRKPKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFNDTFLSIEHLKASFPGHNVKVTVSDPALQIPPFRITFPVRSGKGKKRKDADGEEDDTEEAKTLIVEPHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNYVLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYMSRVKNSGTACPDAAPDAAQVATFFPFHEYFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTRAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAFSQLTARPLHLHIIPTEPFPTSRKNGERPPHEVQVIKNMPQMANFVYNMYMHLIQTTHHYHQTFLQLPPAMVEEGEEGQSQETEMEAEEETVSAQGNLTPSPADASLSQETPAAQPDCSSQTEDTSAPCDIATAAEPVSAAAEAATPQDAESVPTETE", "length": 1481 }, "evidence": [ { "id": "A0A4X1UIY4", "url": "https://omabrowser.org/oma/group/A0A4X1UIY4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 7, "go_terms": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIY4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIY4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIY4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4" } ], "pmid": "" }, { "name": "single-stranded RNA binding", "id": "GO:0003727", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003727", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIY4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4" } ], "pmid": "" }, { "name": "3'-5' RNA helicase activity", "id": "GO:0034458", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034458", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIY4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4" } ], "pmid": "" }, { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIY4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4" } ], "pmid": "" }, { "name": "RNA helicase activity", "id": "GO:0003724", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003724", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIY4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIY4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4" } ], "pmid": "" }, { "name": "catalytic step 2 spliceosome", "id": "GO:0071013", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071013", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIY4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4" } ], "pmid": "" }, { "name": "U2-type catalytic step 2 spliceosome", "id": "GO:0071007", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071007", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIY4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "mRNA splicing, via spliceosome", "id": "GO:0000398", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000398", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UIY4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1440, "end_pos": 1442, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1478, "end_pos": 1480, "annotation": "n_glycosylation_sequon" }, { "start_pos": 715, "end_pos": 717, "annotation": "n_glycosylation_sequon" }, { "start_pos": 80, "end_pos": 82, "annotation": "n_glycosylation_sequon" }, { "start_pos": 960, "end_pos": 962, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "13065", "name": "", "equation": "ATP + H2O = ADP + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "13065", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/13065" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1UIY4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4" }, { "id": "PF13086", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13086" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DNA2/NAM7 helicase helicase", "eco_id": "ECO_0000259", "start_pos": 802, "end_pos": 1106, "start_aa": "Phe", "end_aa": "Asn", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A4X1UIY4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4" }, { "id": "PF13087", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13087" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DNA2/NAM7 helicase-like C-terminal", "eco_id": "ECO_0000259", "start_pos": 1115, "end_pos": 1305, "start_aa": "Met", "end_aa": "Ala", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A4X1UIY4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4" }, { "id": "PF16399", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16399" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RNA helicase aquarius N-terminal", "eco_id": "ECO_0000259", "start_pos": 24, "end_pos": 414, "start_aa": "Thr", "end_aa": "Arg", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A4X1UIY4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4" }, { "id": "PF21143", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21143" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RNA helicase aquarius beta-barrel", "eco_id": "ECO_0000259", "start_pos": 493, "end_pos": 659, "start_aa": "Lys", "end_aa": "Arg", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A4X1UIY4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UIY4" }, { "id": "PF21144", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21144" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RNA helicase aquarius insertion", "eco_id": "ECO_0000259", "start_pos": 707, "end_pos": 794, "start_aa": "Asn", "end_aa": "Gln", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 1458, 1474 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1440, "end_pos": 1442 }, { "start_pos": 1478, "end_pos": 1480 }, { "start_pos": 715, "end_pos": 717 }, { "start_pos": 80, "end_pos": 82 }, { "start_pos": 960, "end_pos": 962 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"MEPTGEQQGQEGGGKPPAARLEEEEELQRSSTPPTPPVGQKAPGEDEPLSCMISREKKPSEASGEMAGPDVGRASQAARSGVAHKDRALAPPRARPQGERCPLPVRKGKLGKRPYSPAPGKQKKPNAAGLASTASPSIPDAARDTYNPVPCGSGWGSCHLADLLSSLTQNNQNTDQKTRSPEAICQGRKKTRTLYRSDQLEELEKFFQEDHYPDSEKRREIAQTVNVAPQRIMVWFQNRRAKWRKVEKMNGKENKDTPAGAEPSPTSNQGSIMPPPACSYSEDLEPQDYQPSNQPGPFPFPHAPQTQLFQPPQPQFPYLQPFPFHMPSSLMPLLPEDPLFALSFGSNANTARSYFPGPPQGQFLLQPPAGNMGTVPWNDPCLPDLPFPGPFCPQALGSPPGIEDYFPDLFAAPYAQALGRQPSPGLARLPEGARPGAGPLLSKAQEEPPTSSAELPSAPEEGREEDQSSHGP", "length": 472, "header": "tr|A0A4X1UJY4-1|A0A4X1UJY4_PIG Isoform 1 of NOBOX oogenesis homeobox OS=Sus scrofa OX=9823 GN=NOBOX PE=4 SV=1 CANONICAL=A0A4X1UJY4-1" }, "isoforms": [ { "isoform_ac": "A0A4X1UJY4-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UJY4/entry", "sequence": { "sequence": "MEPTGEQQGQEGGGKPPAARLEEEEELQRSSTPPTPPVGQKAPGEDEPLSCMISREKKPSEASGEMAGPDVGRASQAARSGVAHKDRALAPPRARPQGERCPLPVRKGKLGKRPYSPAPGKQKKPNAAGLASTASPSIPDAARDTYNPVPCGSGWGSCHLADLLSSLTQNNQNTDQKTRSPEAICQGRKKTRTLYRSDQLEELEKFFQEDHYPDSEKRREIAQTVNVAPQRIMVWFQNRRAKWRKVEKMNGKENKDTPAGAEPSPTSNQGSIMPPPACSYSEDLEPQDYQPSNQPGPFPFPHAPQTQLFQPPQPQFPYLQPFPFHMPSSLMPLLPEDPLFALSFGSNANTARSYFPGPPQGQFLLQPPAGNMGTVPWNDPCLPDLPFPGPFCPQALGSPPGIEDYFPDLFAAPYAQALGRQPSPGLARLPEGARPGAGPLLSKAQEEPPTSSAELPSAPEEGREEDQSSHGP", "length": 472, "header": "tr|A0A4X1UJY4-1|A0A4X1UJY4_PIG Isoform 1 of NOBOX oogenesis homeobox OS=Sus scrofa OX=9823 GN=NOBOX PE=4 SV=1 CANONICAL=A0A4X1UJY4-1" }, "locus": { "chromosome": "9", "start_pos": 113354216, "end_pos": 113348385, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029776.2", "url": "https://www.ensembl.org/id/ENSSSCT00000029776.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000027616.1", "url": "https://www.ensembl.org/id/ENSSSCP00000027616.1" } ] } }, { "isoform_ac": "A0A8D1B3G3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1B3G3/entry", "sequence": { "sequence": "AQPPGDYPEGGGKPPAARLEEEEELQRSSTPPTPPVGQKAPGEDEPLSCMISREKKPSEASGEMAGPDVGRASQAARSGVAHKDRALAPPRARPQGERCPLPVRKGKLGKRPYSPAPGKQKKPNAAGLASTASPSIPDAARDTYNPVPCGSGWGSCHLADLLSSLTQNNQNTDQKTRSPEAICQGRKKTRTLYRSDQLEELEKFFQEDHYPDSEKRREIAQTVNVAPQRIMVWFQNRRAKWRKVEKMNGKENKDTPAGAEPSPTSNQGSIMPPPACSYSEDLEPQDYQPSNQPGPFPFPHAPQTQLFQPPQPQFPYLQPFPFHMPSSLMPLLPEDPLFALSFGSNANTARSYFPGPPQGQFLLQPPAGNMGTVPWNDPCLPDLPFPGPFCPQALGSPPGIEDYFPDLFAAPYAQALGRQPSPGLARLPEGARPGAGPLLSKAQEEPPTSSAELPSAPEEGREEDQSSHGP", "length": 470, "header": "tr|A0A8D1B3G3-1|A0A4X1UJY4_PIG Computationally mapped isoform of NOBOX oogenesis homeobox OS=Sus scrofa OX=9823 GN=NOBOX PE=4 SV=1 CANONICAL=A0A4X1UJY4-1" }, "locus": { "chromosome": "9", "start_pos": 113354216, "end_pos": 113349480, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088495.1", "url": "https://www.ensembl.org/id/ENSSSCT00000088495.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060303.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060303.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 35, "start_aa": "Thr", "end_pos": 35, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr35", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D1B3G3", "url": "https://www.uniprot.org/uniprotkb/A0A8D1B3G3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "O60393-1", "protein_name": "Homeobox protein NOBOX", "gene_name": "NOBOX", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MALLLTLTSPDLEGTWDTRDKDGFKAQEGPPLAVPEFPVCGLYRIYGVCGSFSSFFIIRCSLCALETLKSPQHDPLEIPEQSLKLIPLVSGKRELTRGQKAGEKPLAAGPGEEELLRGSAPHAQDTQSEELPPSCTISGEKKPPAVSGEATGADAGRLCPPPRSRAPHKDRTLARSRPQTQGEDCSLPVGEVKIGKRSYSPAPGKQKKPNAMGLAPTSSPGAPNSARATHNPVPCGSGRGPCHLANLLSTLAQSNQNRDHKQGPPEVTCQIRKKTRTLYRSDQLEELEKIFQEDHYPDSDKRREIAQTVGVTPQRIMVKGAGSLVAGWSGGGPTIETLELQSERSAVAWVWFQNRRAKWRKMEKLNGKESKDNPAAPGPASSQCSSAAEILPAVPMEPKPDPFPQESPLDTFPEPPMLLTSDQTLAPTQPSEGAQRVVTPPLFSPPPVRRADLPFPLGPVHTPQLMPLLMDVAGSDSSHKDGPCGSWGTSITLPPPCSYLEELEPQDYQQSNQPGPFQFSQAPQPPLFQSPQPKLPYLPTFPFSMPSSLTLPPPEDSLFMFPCGPSGGTSQGYCPGASSGQILMQPPAGNIGTASWSDPCLPELPFPGPFCPQALGHPPGGDGYFPDLFPTPCPQALGRQPSSALSWMPEGARPGTGPLLSKAKEEPPAASLDQPSALEEARGDDKNSHVP", "length": 691 }, "evidence": [ { "id": "A0A4X1UJY4", "url": "https://omabrowser.org/oma/group/A0A4X1UJY4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": 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"tr|A0A4X1UK39-1|A0A4X1UK39_PIG Isoform 1 of Signal peptidase complex catalytic subunit SEC11 OS=Sus scrofa OX=9823 GN=SEC11A PE=1 SV=1 CANONICAL=A0A4X1UK39-1" }, "locus": { "chromosome": "7", "start_pos": 52871532, "end_pos": 52829659, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070866.1", "url": "https://www.ensembl.org/id/ENSSSCT00000070866.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067544.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067544.1" } ] } }, { "isoform_ac": "A0A4X1UKS9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UKS9/entry", "sequence": { "sequence": "MLSLDFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQNGHIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVVGRARGFYEENRVEDRNYLFLILGL", "length": 163, "header": "tr|A0A4X1UKS9-1|A0A4X1UKS9_PIG Computationally mapped isoform of Signal peptidase complex catalytic subunit SEC11 OS=Sus scrofa OX=9823 GN=SEC11A PE=1 SV=1 CANONICAL=A0A4X1UK39-1" }, "locus": { "chromosome": "7", "start_pos": 52870977, "end_pos": 52829659, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052419.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052419.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058894.3", "url": "https://www.ensembl.org/id/ENSSSCP00000058894.3" } ] } }, { "isoform_ac": "A0A4X1ULF9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULF9/entry", "sequence": { "sequence": "MLSLDFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLRQNGHIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE", "length": 129, "header": "tr|A0A4X1ULF9-1|A0A4X1ULF9_PIG Computationally mapped isoform of SEC11 homolog A, signal peptidase complex subunit OS=Sus scrofa OX=9823 GN=SEC11A PE=1 SV=1 CANONICAL=A0A4X1UK39-1" }, "locus": { "chromosome": "7", "start_pos": 52871532, "end_pos": 52829659, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": 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"url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100622744", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622744", "resource": "KEGG Pathway" }, { "id": "R-SSC-422085", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-422085", "resource": "Reactome", "description": "Synthesis, secretion, and deacylation of Ghrelin" }, { "id": "R-SSC-9768727", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9768727", "resource": "Reactome", "description": "Regulation of CDH1 posttranslational processing and trafficking to plasma membrane" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "serine-type endopeptidase activity", "id": "GO:0004252", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004252", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UK39", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UK39" } ], "pmid": "" }, { "name": "peptidase activity", "id": "GO:0008233", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008233", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UK39", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UK39" } ], "pmid": "" }, { "name": "signal peptidase activity", "id": "GO:0009003", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009003", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UK39", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UK39" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "signal peptide processing", "id": "GO:0006465", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006465", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UK39", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UK39" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "signal peptidase complex", "id": "GO:0005787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005787", "evidence": [ { 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The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
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The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
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More details and caveats of the event inference in Reactome. 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"mediator complex", "id": "GO:0016592", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016592", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UL35", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UL35" } ], "pmid": "" }, { "name": "core mediator complex", "id": "GO:0070847", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070847", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UL35", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UL35" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 126, "end_pos": 128, "annotation": "n_glycosylation_sequon" }, { "start_pos": 127, "end_pos": 129, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 126, "end_pos": 128 }, { "start_pos": 127, "end_pos": 129 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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{ "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1ULC5-1", "uniprot_ac": "A0A4X1ULC5", "uniprot_id": "A0A4X1ULC5_PIG", "mass": { "chemical_mass": 21012.0, "monoisotopic_mass": 21012.0 }, "refseq": { "ac": "XP_003358917", "name": "ADP-ribosylation factor-like protein 6 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358917" }, "gene_names": [ { "name": "ARL6", "type": "recommended", "evidence": [ { "id": "A0A4X1ULC5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULC5" } ] }, { 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"name": "ARL6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULC5", "locus": { "chromosome": "13", "start_pos": 162504109, "end_pos": 162556280, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000027278", "url": "https://www.ensembl.org/id/ENSSSCG00000027278" } ] } } ], "crossref": [ { "id": "cd04157", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04157", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100624255", "url": "https://www.ncbi.nlm.nih.gov/gene/100624255", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR005225", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005225", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006689", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006689", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR024156", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024156", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041839", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041839", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100624255", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624255", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NKPWHIC", "url": "https://omabrowser.org/oma/group/NKPWHIC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1ULC5", "url": "https://www.orthodb.org/?gene=A0A4X1ULC5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11711", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11711", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00025", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00025", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-5620922", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5620922", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003358917", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358917", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1ULC5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULC5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1ULC5-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULC5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1IYS3", "url": "https://www.uniprot.org/uniprotkb/A0A8D1IYS3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1IYS3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1IYS3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGLLDRLSGLLGLKKKEVHVLCLGLDNSGKTTIINKLKPSNAQSQDIVPTIGFSIEKFKSSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDAVTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQEGVDWLQDQIQAVKT", "length": 186, "header": "tr|A0A4X1ULC5-1|A0A4X1ULC5_PIG Isoform 1 of ADP-ribosylation factor-like protein 6 OS=Sus scrofa OX=9823 GN=ARL6 PE=1 SV=1 CANONICAL=A0A4X1ULC5-1" }, "isoforms": [ { "isoform_ac": "A0A4X1ULC5-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULC5/entry", "sequence": { "sequence": "MGLLDRLSGLLGLKKKEVHVLCLGLDNSGKTTIINKLKPSNAQSQDIVPTIGFSIEKFKSSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDAVTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQEGVDWLQDQIQAVKT", "length": 186, "header": "tr|A0A4X1ULC5-1|A0A4X1ULC5_PIG Isoform 1 of ADP-ribosylation factor-like protein 6 OS=Sus scrofa OX=9823 GN=ARL6 PE=1 SV=1 CANONICAL=A0A4X1ULC5-1" }, "locus": { "chromosome": "13", "start_pos": 162552400, "end_pos": 162510151, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045020.2", "url": "https://www.ensembl.org/id/ENSSSCT00000045020.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032398.1", "url": "https://www.ensembl.org/id/ENSSSCP00000032398.1" } ] } }, { "isoform_ac": "A0A8D1IYS3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1IYS3/entry", "sequence": { "sequence": "MGLLDRLSGLLGLKKKEVHVLCLGLDNSGKTTIINKLKPSNAQSQDIVPTIGFSIEKFKSSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDAVTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQEGVDWLQAIKCKYE", "length": 185, "header": "tr|A0A8D1IYS3-1|A0A4X1ULC5_PIG Computationally mapped isoform of ADP-ribosylation factor-like protein 6 OS=Sus scrofa OX=9823 GN=ARL6 PE=1 SV=1 CANONICAL=A0A4X1ULC5-1" }, "locus": { "chromosome": "13", "start_pos": 162552400, "end_pos": 162513160, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075606.1", "url": "https://www.ensembl.org/id/ENSSSCT00000075606.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064924.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064924.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D1IYS3", "url": "https://www.uniprot.org/uniprotkb/A0A8D1IYS3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100624255", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624255", "resource": "KEGG Pathway" }, { "id": "R-SSC-5620922", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5620922", "resource": "Reactome", "description": "BBSome-mediated cargo-targeting to cilium" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0XWU7-1", "protein_name": "ADP ribosylation factor like GTPase 6", "gene_name": "CRYBG3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGLFDKLAGWLGLKKKEVHVLCLGLDNSGKTTIINKLKPSNAQTQDIVPTIGFSIEKFKTSSLSFTVFDMSGQGRYRNLWEHYYNSENKGSEAINLKSNQKESTTLPALLKVYPNEEKNHSTEELSKSDIQEELKKANSLPSLTPGNKAADKDKQPREGFFQFLGSLFNLATKSSLVDSKPPACQDEPNRCEKDLQSTNTLTEGTQPQHPKTEEPVCSTAGIKEDSLNKDDMIMNNVGKDSSQDQQGGQKRSADVKKQIQRKPQAPAVTYATYRGSARIRQLLKSQSEMTEKGEENTENKNASVIKENGEIQTVVSPKSEHLTKENGEDENKDHEDDVIVNSSTVKMELKKSGETQHYLGSNKHEIMPNASASSTGSSSGVDLEHTPALEANKVKRTYSQDSLLSSSRNSEIPTSSTHQITSALSAVDSLFGKELGEAEAPFQMDKKATSNCEKETHCSDQSYQESTEKMQDGCLQSLRSNDTVNKEPQLSKGEYCCSHQMNNHSELTSNVQMHHSNTTFQQQADEHKGSANKDSDPRKSDAQKIVAAAEKEQNPQNFLATVLSPFKKQTCTSLSVESRGEECIATGNLTASKLAVKNDNDTVVDQVTCNEELNELGKPMHIQNEHQLNLVENSKDTATPQPGLSCLEKMKVLSEVAVESFADVSRTRECDNVKSNLDELTATLSVSFESSFETGDCYSASLHPDCKSVSKTIVKRGVGSKDKRDAVSTPDLEYEKSKSFETVDMSLSENSIPTHGTVSHKTVQDIPKKTLVTLAEDNTSKSSPFPLDSTERTDDPTPAASKISEAGMNEMALTPFESKNCISELSPHISKSQEKNLEVSYSALRCEGKPLTDHFSTICEKDIDVDIISASPPSCESRHINISSKVESNNKHGISSTVLYSSSDNQGKVPSLATNSENGQVARWSAASKQDSCVFLTADSNRIIPEDRMTETPRCSEDLRASCPPISLEPEFTPAELHHFTSEVDVQDFCSARPPSPTQESKEGSNLSISALETSGTAQENCSSSGHRVGVEAEELSSAQQAGDSVLAEAMPSPVCPWKRASNSECTEVCKNAVQQVNLCNETAGMSEALSEKGEQTAAAATESNDLYFEKIWKSTNGVGQDCTDLQDTSLLFKKAEEIVDSVLHLAIEEIIAKQAVGVCQVCGRKDSLVNKDILNDQKTLQLEAEEIQSAVHSLKHFNESSRGGSFSFTGNEMCGTNNQDETIPSYIPAKTDLHSVLALKAREIIDEVINSAKQKLTSNQWQGRESEKHSEKIERKPMAENPEILNLDGNLSSETQELIREPAGKAETQNISINCEKAVCSGPPLLPNSMDNSIDWLQRDEDVPNNAIACQTNGFLSTGSSVRPESTPMILAKEECDKKVCEHLAAAETCGKAGLSATSRKSDVSLHLINRDAAVTEEISLPLQLNDSCSNTDTPELMLLPSVNVNLSSFMPDEESISTLSEYKVKRSPRGSAESSAEGNLDEHSGREAAETLSQVIAALEDSKVGESKEEVAKRTSETALVNIELNTQFIDSELPVTEEHSEGKNYFNSVYAQNKENLKEVEMKDSDLQRYNHLEENGLDCTNDMKESADLLGFSPLIEQRENSSFTIVYEGALQTENKSVSTGDDSSSDLPLDSVGFLMCERPKNKNDPTCFYGKNNNLNKATEGNSSESFLCVEAKRYRVYPLSLSPIYEDDSSHEDLLSADMSPEGHPNGVSKDNFDHTSVLSLLQSVSERLQLTTQFSKEENEEGMEDEDEEESSYEGKVLDVERGEEECLSSHWTRNLTAAALSNDQNIYPLPEQSPFLSKEQLGSKEQTGQFQDETSLGQTYCNTVLQKADTTLKYPPTSAYYQYLRSANNYSSEKGTRFGNILQDILQPKIRWSQDHVMPKLGELPVNLVDRASLTYNPRPGKIIIYDIHGDKSKQEIHSDVLDATSWIFPIGALLRIIRGCWIFYEKPKFHGQKYVLEEGETVLDHLWDLPGVKHHRRSLTVGSIKHVTKDCSVPEIEFSVGANTEGLPICIQSAVANLEELDVEKNPYIHVKSGIWLAYSDLNYKGEMKILEECSELSEIPSADVRSVRPLKMGGLKVQMPMNVKIIIYEKTHFGGWSKEFSENISSVLALFGNEEDFQEIGSIRVIGGVWVAYDKERYKGRQYLLEEGDYEDMHTWGGTGSVLLSFRFLQADFIESSVALFQSDDEDGKALDIVNEEIPDLEQTGFGPETKSILVKSGVWVAYQQKHFCGEQYVLEKGKYKCFFDWGGSSKIIMSIRPIKLEPLGTNEPPHLLKAFSNTHFQGACIDFTAEVSDFTSFIPCSFKVLRGCWLLYYQGETDDDHCVLEEGLYIDLPSCGCPTAAIKSLKPIEYVFAEPSLSLFALESCKGRELHFSEPVNSVLNEDLHFYAQSVWVRSGLWIAYEGCNFLGKQILLEPGEISNWNEYSGWKVIGSLRPVKQPAVYLRIRNRAQGKYLTVAGSLADVRATSVCVSPYSGRDTQIWHYCRGLFKSKVNDACLDVIGGRDVPGAKVALWAEHGKERQKWRLNEDGTISSYLSDQLVLDIKGGNYYDKNHIVMNEPEEDKRSQKWDIEIL", "length": 2586 }, "evidence": [ { "id": "A0A4X1ULC5", "url": "https://omabrowser.org/oma/group/A0A4X1ULC5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A9J7FUJ4-1", "protein_name": "ADP-ribosylation factor-like protein 6", "gene_name": "Arl6", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGLLDKLSGLLGLKKKEVHVLCLGLDNSGKTTIINKLKPSNAQCQDIVPTIGFTIEKFKSSSLSFTVFDMSGQGRYRNLWEHYYKDGQAIIFVIDSSDKLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDAVTSVKVSQLLCLESIKDKPWHICASDAIKGEGLQEGVDWLQGTSHTTVHL", "length": 187 }, "evidence": [ { "id": "A0A4X1ULC5", "url": "https://omabrowser.org/oma/group/A0A4X1ULC5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A1ZBK9-1", "protein_name": "ADP-ribosylation factor-like protein 6", "gene_name": "Arl6", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MGMLHNLADLIKIKKDKMTILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMSGVSIKAIDMSGATRYRNLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFYGNKMDMEDSLSSVKIAAALRLENIKDKPWHICSSSAISGEGLGEGVQWLIQQMRFAMLNNKNAAKSRSKHSK", "length": 202 }, "evidence": [ { "id": "A0A4X1ULC5", "url": "https://omabrowser.org/oma/group/A0A4X1ULC5/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "O88848-1", "protein_name": "ADP-ribosylation factor-like protein 6", "gene_name": "Arl6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLDRLSGLLGLKKKEVHVLCLGLDNSGKTTIINKLKPSNAQSQDIVPTIGFSIEKFKSSSLSFTVFDMSGQGRYRNLWEHYYKDGQAIIFVIDSSDKLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDSVTSVKVSQLLCLESIKDKPWHICASDAIKGEGLQEGVDWLQDQIQAVKT", "length": 186 }, "evidence": [ { "id": "A0A4X1ULC5", "url": "https://omabrowser.org/oma/group/A0A4X1ULC5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q0IIM2-1", "protein_name": "ADP-ribosylation factor-like protein 6", "gene_name": "ARL6", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGLLDRLSGLLGLKKKEVHVLCLGLDNSGKTTIINKLKPSNAQSQDIVPTIGFSIQKFKSSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDKLRMVVAKEELRTLLNHPDIKHRRIPILFFANKMDLRDALTSVKVSQLLCLEDIKDKPWHICASDAIKGEGLQEGVDWLQDQIQSVKT", "length": 186 }, "evidence": [ { "id": "A0A4X1ULC5", "url": "https://omabrowser.org/oma/group/A0A4X1ULC5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5M9P8-1", "protein_name": "ADP-ribosylation factor-like protein 6", "gene_name": "arl6", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGLFDKLAGWLGLKKKEVNVLCLGLDNSGKTTIINQLKPSNAQAQDIVPTIGFSIEKFKTSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSGDKLRMVVAKEELDTLLNHPDIKHRRIPLLFFANKMDLRDALSAVKVSQLLCLENIKDKPWHICASDAVKGEGLLEGVDWLQDQIRAMKT", "length": 186 }, "evidence": [ { "id": "A0A4X1ULC5", "url": "https://omabrowser.org/oma/group/A0A4X1ULC5/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9H0F7-1", "protein_name": "ADP-ribosylation factor-like protein 6", "gene_name": "ARL6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGLLDRLSVLLGLKKKEVHVLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFSIEKFKSSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDAVTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQEGVDWLQDQIQTVKT", "length": 186 }, "evidence": [ { "id": "A0A4X1ULC5", "url": "https://omabrowser.org/oma/group/A0A4X1ULC5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "GTPase activity", "id": "GO:0003924", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003924", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1ULC5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULC5" } ], "pmid": "" }, { "name": "GTP binding", "id": "GO:0005525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005525", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1ULC5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULC5" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1ULC5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULC5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1ULC5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULC5" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1ULC5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULC5" } ], "pmid": "" }, { "name": "axoneme", "id": "GO:0005930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005930", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1ULC5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULC5" } ], "pmid": "" }, { "name": "ciliary membrane", "id": "GO:0060170", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060170", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1ULC5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULC5" } ], "pmid": "" }, { "name": "ciliary tip", "id": "GO:0097542", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097542", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1ULC5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULC5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 8, "go_terms": [ { "name": "intracellular protein transport", "id": "GO:0006886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006886", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1ULC5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULC5" } ], "pmid": "" }, { "name": "cilium assembly", "id": "GO:0060271", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060271", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1ULC5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULC5" } ], "pmid": "" }, { "name": "Wnt signaling pathway", "id": "GO:0016055", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016055", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1ULC5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULC5" } ], "pmid": "" }, { "name": "fat cell differentiation", "id": "GO:0045444", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045444", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1ULC5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULC5" } ], "pmid": "" }, { "name": "vesicle-mediated transport", "id": "GO:0016192", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016192", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1ULC5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULC5" } ], "pmid": "" }, { "name": "protein localization to cilium", "id": "GO:0061512", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061512", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1ULC5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULC5" } ], "pmid": "" }, { "name": "protein localization to non-motile cilium", "id": "GO:0097499", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097499", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1ULC5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULC5" } ], "pmid": "" }, { "name": "cell projection organization", "id": "GO:0030030", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030030", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1ULC5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULC5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [ { "evidence": [ { "id": "A0A4X1ULC5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULC5" }, { "id": "PIRSR606689-2", "database": "PIR Site Rule", "url": "https://proteininformationresource.org/cgi-bin/pirrule?id=PIRSR606689-2" } ], "binding_site_uniprot": 31, "amino_acid": "Thr", "chebi_lig_id": "CHEBI:18420", "ligand": "Mg(2+)", "ligand_label": "", "uniprotkb_ligand_comment": "", "eco_id": "ECO_0000256", "start_pos": 31, "end_pos": 31, "start_aa": "Thr", "end_aa": "Thr", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A4X1ULC5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULC5" }, { "id": "PIRSR606689-2", "database": "PIR Site Rule", "url": "https://proteininformationresource.org/cgi-bin/pirrule?id=PIRSR606689-2" } ], "binding_site_uniprot": 50, "amino_acid": "Thr", "chebi_lig_id": "CHEBI:18420", "ligand": "Mg(2+)", "ligand_label": "", "uniprotkb_ligand_comment": "", "eco_id": "ECO_0000256", "start_pos": 50, "end_pos": 50, "start_aa": "Thr", "end_aa": "Thr", "glycosite_overlap": [] } ], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1ULM2-1", "uniprot_ac": "A0A4X1ULM2", "uniprot_id": "A0A4X1ULM2_PIG", "mass": { "chemical_mass": 35186.0, "monoisotopic_mass": 35186.0 }, "refseq": { "ac": "XP_013841874", "name": "olfactory receptor 1L1-like", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013841874" }, "gene_names": [ { "name": "LOC100152475", "type": "recommended", "evidence": [ { "id": "A0A4X1ULM2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULM2" } ] }, { "name": "LOC100152475", "type": "synonym", "evidence": [ { "id": "XP_013841874", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013841874" } ] } ], "protein_names": [ { "name": "Olfactory receptor", "type": "recommended", "evidence": [ { "id": "A0A4X1ULM2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1ULM2/entry#names_and_taxonomy" } ] }, { "name": "olfactory receptor 1L1-like", "type": "synonym", "evidence": [ { "id": "XP_013841874", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013841874" } ] } ], "function": [ { "annotation": "Putative odorant or sperm cell receptor.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1ULM2", "url": 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"protein_name": "Tubulin polymerization-promoting protein family member 3", "gene_name": "Tppp3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAASTDVAGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEELATKRFKGKSKEEAFDAICQLVAGKEPANLGVTKAKTGGAVDRLTDTSKYTGSHKERFDESGKGKGIAGRQDILDDSGYVSAYKNAGTYDAKVKK", "length": 176 }, "evidence": [ { "id": "A0A4X1UMD5", "url": "https://omabrowser.org/oma/group/A0A4X1UMD5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q3ZCC8-1", "protein_name": "Tubulin polymerization-promoting protein family member 3", "gene_name": "TPPP3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAASTDVAGLEESFRKFAIHGDPKASGHEMNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEELAPKRFKGKSKEEAFDAICQLVAGKEPANVGVTKAKTGGAVERLTDTSKYTGSHKERFDESGKGKGIAGRQDILDDSGYVSAYKNAGTYDAKVKK", "length": 176 }, "evidence": [ { "id": "A0A4X1UMD5", "url": "https://omabrowser.org/oma/group/A0A4X1UMD5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5PPN5-1", "protein_name": "Tubulin polymerization-promoting protein family member 3", "gene_name": "Tppp3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAASTDIAGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEELATKRFKGKTKEEAFDAICQLIAGKEPANIGVTKAKTGGAVDRLTDTSKYTGSHKERFDESGKGKGIAGRQDILDDSGYVSAYKNAGTYDAKVKK", "length": 176 }, "evidence": [ { "id": "A0A4X1UMD5", "url": "https://omabrowser.org/oma/group/A0A4X1UMD5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9BW30-1", "protein_name": "Tubulin polymerization-promoting protein family member 3", "gene_name": "TPPP3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAASTDMAGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKVKGKSARVINYEEFKKALEELATKRFKGKSKEEAFDAICQLVAGKEPANVGVTKAKTGGAVDRLTDTSRYTGSHKERFDESGKGKGIAGRQDILDDSGYVSAYKNAGTYDAKVKK", "length": 176 }, "evidence": [ { "id": "A0A4X1UMD5", "url": "https://omabrowser.org/oma/group/A0A4X1UMD5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9CRB6-1", "protein_name": "Tubulin polymerization-promoting protein family member 3", "gene_name": "Tppp3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAASTDIAGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEELATKRFKGKSKEEAFDAICQLIAGKEPANIGVTKAKTGGAVDRLTDTSKYTGSHKERFDESGKGKGIAGRQDILDDSGYVSAYKNAGTYDAKVKK", "length": 176 }, "evidence": [ { "id": "A0A4X1UMD5", "url": "https://omabrowser.org/oma/group/A0A4X1UMD5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9VV43-1", "protein_name": "Tubulin polymerization-promoting protein homolog", "gene_name": "ringer", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSEVAAANGSPSPAPTPEVPATELAQLALEDEPKVSFSDQFKAFSKFGDSKSDGKLITLSQSDKWMKQAKVIDKKITTTDTGIHFKKFKAMKISLSDYNKFLDDLAKTKKVELSEIKQKLASCGAPGVVSVSAGKAAAAVDRLTDTSKYTGSHKERFDASGKGKGIAGRRNVVDGSGYVSGYQHKDTYDNAH", "length": 192 }, "evidence": [ { "id": "A0A4X1UMD5", "url": "https://omabrowser.org/oma/group/A0A4X1UMD5/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "microtubule polymerization", "id": "GO:0046785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046785", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UMD5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UMD5" } ], "pmid": "" }, { "name": "embryo implantation", "id": "GO:0007566", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007566", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UMD5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UMD5" } ], "pmid": "" }, { "name": "decidualization", "id": "GO:0046697", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046697", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UMD5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UMD5" } ], "pmid": "" }, { "name": "microtubule bundle formation", "id": "GO:0001578", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001578", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UMD5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UMD5" } ], "pmid": "" }, { "name": "positive regulation of protein polymerization", "id": "GO:0032273", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032273", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UMD5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UMD5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "microtubule", "id": "GO:0005874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005874", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UMD5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UMD5" } ], "pmid": "" }, { "name": "perinuclear region of cytoplasm", "id": "GO:0048471", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048471", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UMD5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UMD5" } ], "pmid": "" }, { "name": "microtubule bundle", "id": "GO:0097427", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097427", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UMD5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UMD5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "tubulin binding", "id": "GO:0015631", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015631", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UMD5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UMD5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1UMT8-1", "uniprot_ac": "A0A4X1UMT8", "uniprot_id": "A0A4X1UMT8_PIG", "mass": { "chemical_mass": 57544.0, "monoisotopic_mass": 57544.0 }, "refseq": { "ac": "NP_001230827", "name": "WD40 repeat-containing protein SMU1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230827" }, "gene_names": [ { "name": "SMU1", "type": "recommended", "evidence": [ { "id": "A0A4X1UMT8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UMT8" } ] }, { "name": "SMU1", "type": "synonym", "evidence": [ { "id": "NP_001230827", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230827" } ] } ], "protein_names": [ { "name": "WD40 repeat-containing protein SMU1", "type": "recommended", "evidence": [ { "id": "A0A4X1UMT8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UMT8/entry#names_and_taxonomy" } ] }, { "name": "DNA replication regulator and spliceosomal factor", "type": "synonym", "evidence": [ { "id": "NP_001230827", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230827" } ] }, { "name": "Smu-1 suppressor of mec-8 and unc-52 protein homolog", "type": "synonym", "evidence": [ { "id": "A0A4X1UMT8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UMT8/entry#names_and_taxonomy" } ] }, { "name": "WD40 repeat-containing protein SMU1", "type": "synonym", "evidence": [ { "id": "NP_001230827", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230827" } ] }, { "name": "smu-1 suppressor of mec-8 and unc-52 homolog", "type": "synonym", "evidence": [ { "id": "NP_001230827", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230827" } ] } ], "function": [ { "annotation": "Involved in pre-mRNA splicing as a component of the spliceosome. Regulates alternative splicing of the HSPG2 pre-mRNA. Required for normal accumulation of IK. Required for normal mitotic spindle assembly and normal progress through mitosis.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FGK4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGK4#function" }, { "database": "UniProtKB", "id": "ARBA00046199", "url": "https://www.uniprot.org/uniprotkb/ARBA00046199#function" }, { "database": "UniProtKB", "id": "A0A4X1UMT8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UMT8#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UMT8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UMT8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SMU1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UMT8", "locus": { "chromosome": "10", "start_pos": 33430971, "end_pos": 33399383, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000010999", "url": "https://www.ensembl.org/id/ENSSSCG00000010999" } ] } } ], "crossref": [ { "id": "A0A4X1UMT8", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1UMT8", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd00200", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00200", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100511830", "url": "https://www.ncbi.nlm.nih.gov/gene/100511830", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001680", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001680", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006594", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006594", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006595", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006595", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015943", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015943", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019775", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019775", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020472", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020472", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036322", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036322", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045184", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045184", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR054532", "url": "https://www.ebi.ac.uk/interpro/entry/IPR054532", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056153", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056153", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100511830", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511830", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1UMT8", "url": "https://www.orthodb.org/?gene=A0A4X1UMT8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR22848", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22848", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00400", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00400", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF17814", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17814", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23381", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23381", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001230827", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230827", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1UMT8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UMT8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UMT8-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UMT8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FGK4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGK4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FGK4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGK4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVLQAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENLLARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPPGMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP", "length": 513, "header": "tr|A0A4X1UMT8-1|A0A4X1UMT8_PIG Isoform 1 of WD40 repeat-containing protein SMU1 OS=Sus scrofa OX=9823 GN=SMU1 PE=1 SV=1 CANONICAL=A0A4X1UMT8-1" }, "isoforms": [ { "isoform_ac": "A0A4X1UMT8-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UMT8/entry", "sequence": { "sequence": "MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVLQAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENLLARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPPGMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP", "length": 513, "header": "tr|A0A4X1UMT8-1|A0A4X1UMT8_PIG Isoform 1 of WD40 repeat-containing protein SMU1 OS=Sus scrofa OX=9823 GN=SMU1 PE=1 SV=1 CANONICAL=A0A4X1UMT8-1" }, "locus": { "chromosome": "10", "start_pos": 33425874, "end_pos": 33399420, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012041.5", "url": "https://www.ensembl.org/id/ENSSSCT00000012041.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011733.4", "url": 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1UN95-1", "uniprot_ac": "A0A4X1UN95", "uniprot_id": "A0A4X1UN95_PIG", "mass": { "chemical_mass": 37153.0, "monoisotopic_mass": 37153.0 }, "refseq": { "ac": "XP_020941379", "name": "SH3 domain-containing YSC84-like protein 1 isoform X3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020941379" }, "gene_names": [ { "name": "SH3YL1", "type": "recommended", "evidence": [ { "id": "A0A4X1UN95", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UN95" } ] }, { "name": "SH3YL1", "type": "synonym", "evidence": [ { "id": "XP_020941379", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020941379" } ] } ], "protein_names": [ { "name": "SH3 domain-containing YSC84-like protein 1", "type": "recommended", "evidence": [ { "id": "A0A4X1UN95", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UN95/entry#names_and_taxonomy" } ] }, { "name": "SH3 domain-containing YSC84-like protein 1 isoform X3", "type": "synonym", "evidence": [ { "id": "XP_020941379", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020941379" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UN95", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UN95" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SH3YL1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UN95", "locus": { "chromosome": "3", "start_pos": 132730998, "end_pos": 132684960, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000023273", "url": "https://www.ensembl.org/id/ENSSSCG00000023273" } ] } } ], "crossref": [ { "id": "cd11525", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd11525", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd11841", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd11841", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100625380", "url": "https://www.ncbi.nlm.nih.gov/gene/100625380", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007461", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007461", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR033643", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033643", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035511", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035511", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036028", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036028", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051702", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051702", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "SNCKARN", "url": "https://omabrowser.org/oma/group/SNCKARN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR15629", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15629", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15629:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15629:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04366", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04366", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14604", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14604", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020941379", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020941379", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1UN91", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UN91", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UN91-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UN91-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UN95", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UN95", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UN95-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UN95-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNNPIPSNLKSEAKKAAKILREFTEITSRNGPDKIIPAHVIAKAKGLAILSVIKAGFLVTARGGSGIVLARLPDGKWSAPSAIGIAGLGGGFELGIEVSDLVIILNYGRAVEAFAKGGNLTLGGNCTVAVGPLGRNLEGNVSLRSSAAVFTYCKSRGLFAGISLEGSCLIERKETNRKFYCQDVRAYDILFGDIPRPAQAEDLYEVLDSFTEKYESEGQRINARKAAREQKKAQAKELPPKPLSRPQQSSAQVQLNSGSQSNRNEYKLYPELPSYHERVGSLNQPTEVTALYSFEGQQPGDLNFQAGDRITVISKTDSHFDWWEGELRGQTGIFPANYVTMN", "length": 342, "header": "tr|A0A4X1UN95-1|A0A4X1UN95_PIG Isoform 1 of SH3 domain-containing YSC84-like protein 1 OS=Sus scrofa OX=9823 GN=SH3YL1 PE=3 SV=1 CANONICAL=A0A4X1UN95-1" }, "isoforms": [ { "isoform_ac": "A0A4X1UN91-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UN91/entry", "sequence": { "sequence": "MNNPIPSNLKSEAKKAAKILREFTEITSRNGPDKIIPAHVIAKAKGLAILSVIKAGFLVTARGGSGIVLARLPDGKWSAPSAIGIAGLGGGFELGIEVSDLVIILNYGRAVEAFAKGGNLTLGGNCTVAVGPLGRNLEGNVSLRSSAAVFTYCKSRGLFAGISLEGSCLIERKETNRKFYCQDVRAYDILFGDIPRPAQAEDLYEVLDSFTEKYESEGQRINARKAAREQKKAQAKELPPKPLSRPQQSSAQVQLNSGSQSSLNQPTEVTALYSFEGQQPGDLNFQAGDRITVISKTDSHFDWWEGELRGQTGIFPANYVTMN", "length": 323, "header": "tr|A0A4X1UN91-1|A0A4X1UN91_PIG Computationally mapped isoform of SH3 domain-containing YSC84-like protein 1 OS=Sus scrofa OX=9823 GN=SH3YL1 PE=3 SV=1 CANONICAL=A0A4X1UN95-1" }, "locus": { "chromosome": "3", "start_pos": 132730123, "end_pos": 132685537, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061021.3", "url": "https://www.ensembl.org/id/ENSSSCT00000061021.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000042100.2", "url": "https://www.ensembl.org/id/ENSSSCP00000042100.2" } ] } }, { "isoform_ac": "A0A4X1UN95-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UN95/entry", "sequence": { "sequence": "MNNPIPSNLKSEAKKAAKILREFTEITSRNGPDKIIPAHVIAKAKGLAILSVIKAGFLVTARGGSGIVLARLPDGKWSAPSAIGIAGLGGGFELGIEVSDLVIILNYGRAVEAFAKGGNLTLGGNCTVAVGPLGRNLEGNVSLRSSAAVFTYCKSRGLFAGISLEGSCLIERKETNRKFYCQDVRAYDILFGDIPRPAQAEDLYEVLDSFTEKYESEGQRINARKAAREQKKAQAKELPPKPLSRPQQSSAQVQLNSGSQSNRNEYKLYPELPSYHERVGSLNQPTEVTALYSFEGQQPGDLNFQAGDRITVISKTDSHFDWWEGELRGQTGIFPANYVTMN", "length": 342, "header": "tr|A0A4X1UN95-1|A0A4X1UN95_PIG Isoform 1 of SH3 domain-containing YSC84-like protein 1 OS=Sus scrofa OX=9823 GN=SH3YL1 PE=3 SV=1 CANONICAL=A0A4X1UN95-1" }, "locus": { "chromosome": "3", "start_pos": 132730123, "end_pos": 132686897, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078102.1", "url": "https://www.ensembl.org/id/ENSSSCT00000078102.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063175.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063175.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UN95", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UN95" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0XHH4-1", "protein_name": "SH3 domain-containing YSC84-like protein 1", "gene_name": "SH3YL1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MDLWSDTTCMYYWEALLLINLQMVGVDTSKIVNNPIPSNLKSEAKKAAKILREFTEITSRNGPDKIIPPHVIAKAKGLAVLSVIKAGFLVTARGGSGIVLARLPNGTWSAPSAIGIAGLGGGFEIGIEVSDLVIILNHERAVEAFAKGGNLTLGGNLTVAIGPLGRNLEGDVALRSSAAVYTYCKSRGLFAGVSLEGTCLIERKETNRKFYGQDIRASAILLGDVPFPAQAEDLYETLASFIEVYENEEQRNNPGKAVNDPPGRPSRPEPHKPSVRPTPPAKKNSNKLYPELPSDYASLSNSTSNPVEVTALYSFEGQQPGDLTFKAGDKIIVTTKTGSQFDWWEGRIGGQTGIFPANYVAISND", "length": 365 }, "evidence": [ { "id": "A0A4X1UN95", "url": "https://omabrowser.org/oma/group/A0A4X1UN95/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A9J7GA36-1", "protein_name": "SH3 domain-containing YSC84-like protein 1", "gene_name": "Sh3yl1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKLKYILKLDVFSPSVVCFFNLSVNNPIPSNLKSEAKKAAKILREFTEITSRNGPDKIIPAHVIAKAKGLAVLSVIKAGFLVTARGGSGIVLARLPDGKWSAPSAIGIAGLGGGFEIGIEVSDLVIILNYDKAVEAFAKGGNLTLGGNFTVAVGPLGRNLEGNVSLRSSAAVFTYCKSRGLFAGISLEGSCLIERKETNKKFYCQDIRAYDILFGDVPQPAQAEDLYEILNSFTEKYENEGQRINLRKVAREQRKAKELPPKPSSRPQQSRAPVQLNSGSQSNGNGYKLYPELSSYHEKNGSLNQPIEVTALYSFEGQQPGDLNFQAGDRITVISKTDSHFDWWEGKLRGQTGIFPANYVTMN", "length": 363 }, "evidence": [ { "id": "A0A4X1UN95", "url": "https://omabrowser.org/oma/group/A0A4X1UN95/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "B0BNA1-1", "protein_name": "SH3 domain-containing YSC84-like protein 1", "gene_name": "Sh3yl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNNPIPSNLKSEAKKAAKILREFTEITSRNGPDKIIPAHVIAKAKGLAVLSVIKAGFLVTARGGSGIVLARLPDGKWSAPSAIGIAGLGGGFEIGIEVSDLVIILNYDRAVEAFAKGGNLTLGGNFTVAVGPLGRNLEGNVSLRSSAAVFTYCKSRGLFAGISLEGSCLIERKETNRKFYCQDIRAYDILFGDVPQPAQAEDLYEILNSFTEKYETEGQRINLKKVAREQRKAKELPPKPSSRPQPSRPPVQLNAGSQSNRNEYKLYPELSSYHEKTGSLSQPIEVTALYSFEGQQPGDLNFQAGDRIIVISKTDSNFDWWEGKLRGQTGIFPANYVTMN", "length": 340 }, "evidence": [ { "id": "A0A4X1UN95", "url": "https://omabrowser.org/oma/group/A0A4X1UN95/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "O08641-1", "protein_name": "SH3 domain-containing YSC84-like protein 1", "gene_name": "Sh3yl1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNNPIPSNLKSEAKKAAKILREFTEITSRNGPDKIIPAHVIAKAKGLAVLSVIKAGFLVTARGGSGIVLARLPDGKWSAPSAIGIAGLGGGFEIGIEVSDLVIILNYDRAVEAFAKGGNLTLGGNFTVAVGPLGRNLEGNVSLRSSAAVFTYCKSRGLFAGISLEGSCLIERKETNRKFYCQDIRAYDILFGDVPQPAQAEDLYEILNSFTEKYETEGQRINLKKVAREQRKAKELPPKPSSRPQPAHPPVQLNAGSQGNRNEYKLYPELSSYHEKTGNLNQPIEVTALYSFEGQQPGDLNFQAGDRIIVISKTDSNFDWWEGKLRGQTGIFPANYVTMN", "length": 340 }, "evidence": [ { "id": "A0A4X1UN95", "url": "https://omabrowser.org/oma/group/A0A4X1UN95/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P43603-1", "protein_name": "LAS seventeen-binding protein 3", "gene_name": "LSB3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MGINNPIPRSLKSETKKAAKILASFVKPNQVFGADQVIPPDVLKRAKGLAIITILKAGFLFSGRAGSGVIVARLKDGTWSAPSAIAMAGAGAGGMVGIELTDFVFILNTQDAVKSFSEFGTITLGGNVSVSAGPLGRSAEAAASASAGGVAAVFAYSKSKGLFAGVSVEGSAIIERREANRKFYGDNCTAKMILSGRIRPPPAVDPLFRVLESRAFNYRPSNGGRGSFDDDEDDYYDDDDYYNDIPSSFSSTDASSTRPNTRSTRRRAQSGSRYTFDDDDDDDDYGTGYSRNSRLAPTNSGGSGGKLDDPSGASSYYASHRRSGTAQSRARSSRNRWADDEYDDYDDDYESGYRRGNGRDRTKDREVDDLSNRFSKSRISSASTPQTSQGRFTAPTSPSTSSPKAVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVELV", "length": 459 }, "evidence": [ { "id": "A0A4X1UN95", "url": "https://omabrowser.org/oma/group/A0A4X1UN95/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q3SZ01-1", "protein_name": "SH3 domain-containing YSC84-like protein 1", "gene_name": "SH3YL1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNNPIPSNLKSEAKKAAKILREFTEITSRNGPDKIIPAHVIAKAKGLAILSVIKAGFLVTARGGSGIVLARLPDGKWSAPSAIGIAGLGGGFELGIEVSDLVIILNYDRAVEAFAKGGNLTLGGNLTVAVGPLGRNLEGNVSLRSSAAVFTYCKSRGLFAGISLEGSCLIERKETNRKFYCQDIRAYDILFGDITRPAQAEDLYEVLDSFTEKYEIEGQRVNARRAAREQKKASAKLPPKPSSRPEQSSAQVQLSSGSQSSRNEYNLYPELSSYRERVGNSNQPIEVTALYSFEGQQPGDLNFQAGDRITVISKTDSHFDWWEGKLRGRTGIFPANYVTMN", "length": 341 }, "evidence": [ { "id": "A0A4X1UN95", "url": "https://omabrowser.org/oma/group/A0A4X1UN95/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q96HL8-1", "protein_name": "SH3 domain-containing YSC84-like protein 1", "gene_name": "SH3YL1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNNPIPSNLKSEAKKAAKILREFTEITSRNGPDKIIPAHVIAKAKGLAILSVIKAGFLVTARGGSGIVVARLPDGKWSAPSAIGIAGLGGGFEIGIEVSDLVIILNYDRAVEAFAKGGNLTLGGNLTVAVGPLGRNLEGNVALRSSAAVFTYCKSRGLFAGVSLEGSCLIERKETNRKFYCQDIRAYDILFGDTPRPAQAEDLYEILDSFTEKYENEGQRINARKAAREQRKSSAKELPPKPLSRPQQSSAPVQLNSGSQSNRNEYKLYPGLSSYHERVGNLNQPIEVTALYSFEGQQPGDLNFQAGDRITVISKTDSHFDWWEGKLRGQTGIFPANYVTMN", "length": 342 }, "evidence": [ { "id": "A0A4X1UN95", "url": "https://omabrowser.org/oma/group/A0A4X1UN95/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "X1WFC4-1", "protein_name": "SH3 domain-containing YSC84-like protein 1", "gene_name": "sh3yl1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": 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"MPGRALLRVARGALGVWLLGGFWVWALGGLCGLGAAAPGAGAGGSPSAQRPCQAPQQWEGRQVLYRQSTGRYSRALLSYDGLNQRVRVLDERKALIPCKRLFEYILLYNDGVMFQIEQATKQCSKITLTDPWDPLDIPQNSTFEDQYSIGGPQEQITVQEWSDRKSARSYETWIGIYTAKDCYPVQETFTKNYSVILSTRFFDIQLGIKDPSVFIPPSTCQTAQPERMREDCSW", "length": 234, "header": "tr|A0A4X1UPP6-1|A0A4X1UPP6_PIG Isoform 1 of Mammalian ependymin-related protein 1 OS=Sus scrofa OX=9823 GN=EPDR1 PE=1 SV=1 CANONICAL=A0A4X1UPP6-1" }, "isoforms": [ { "isoform_ac": "A0A4X1UPP6-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UPP6/entry", "sequence": { "sequence": "MPGRALLRVARGALGVWLLGGFWVWALGGLCGLGAAAPGAGAGGSPSAQRPCQAPQQWEGRQVLYRQSTGRYSRALLSYDGLNQRVRVLDERKALIPCKRLFEYILLYNDGVMFQIEQATKQCSKITLTDPWDPLDIPQNSTFEDQYSIGGPQEQITVQEWSDRKSARSYETWIGIYTAKDCYPVQETFTKNYSVILSTRFFDIQLGIKDPSVFIPPSTCQTAQPERMREDCSW", "length": 234, "header": "tr|A0A4X1UPP6-1|A0A4X1UPP6_PIG Isoform 1 of Mammalian ependymin-related protein 1 OS=Sus scrofa OX=9823 GN=EPDR1 PE=1 SV=1 CANONICAL=A0A4X1UPP6-1" }, "locus": { "chromosome": "9", "start_pos": 108445649, "end_pos": 108418336, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031911.3", "url": "https://www.ensembl.org/id/ENSSSCT00000031911.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000026710.2", "url": "https://www.ensembl.org/id/ENSSSCP00000026710.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UPP6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UPP6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Z152-1", "protein_name": "Mammalian ependymin-related protein 1", "gene_name": "EPDR1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALATGGLLLLLGGLLVRGGAGAEPCRAPGQWEGRSVRYDHGTGRNTRAAVSYDGLNQRLRILEERKALIPCKKFFEYILLYKDAVMFQIEQVTKLCSKIALTEPWDPYDIPTNSTFEDQYYIGGPGDQIMVQEWSDRKPARKLESWVGVYTVKDCYPVQETYTKNYSVTTSTRFFDLKLGIADPSVFTPPSTCQTAQPRKMKDEC", "length": 206 }, "evidence": [ { "id": "A0A4X1UPP6", "url": "https://omabrowser.org/oma/group/A0A4X1UPP6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A6QLI0-1", "protein_name": "Mammalian ependymin-related protein 1", "gene_name": "EPDR1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPRRAPLRVARGSLDAWLLGGLWVCALGCLCGVGMAAPGAGAGAGGSLGAQRPCQAPQQWEGRQVLYRQSTGRYSRALLSYDGLNQRVRVLDERKALIPCKRLFEYILLYKDGVMFQIEQATKQCSKITLTEPWDPLDIPQNSTFEDQYSIGGPQEQITVQEWSDRKSARSYETWIGIYTVKDCYPVQETVTKNYSVILSTRFFDIQLGIKDPSVFIPPSTCQTAQPERMSEECSW", "length": 236 }, "evidence": [ { "id": "A0A4X1UPP6", "url": "https://omabrowser.org/oma/group/A0A4X1UPP6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5XII0-1", "protein_name": "Mammalian ependymin-related protein 1", "gene_name": "Epdr1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLTRAPRRLVQGPRETWLLGGLWVWILCGLGMAGSPGTPQPCQAPQQWEGRQVLYQQSSGHNSRALVSYDGLNQRVRVLDERKALIPCKRLFEYILLYKDGVMFQIEQATKLCAKIPLAEPWDPLDIPQNSTFEDQYSIGGPQEQIMVQEWSDRRTARSYETWIGVYTAKDCYPVQETFIRNYTVVLSTRFFDVQLGIKDPSVFTPPSTCQTAQPEKMKENCSL", "length": 224 }, "evidence": [ { "id": "A0A4X1UPP6", "url": "https://omabrowser.org/oma/group/A0A4X1UPP6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q99M71-1", "protein_name": "Mammalian ependymin-related protein 1", "gene_name": "Epdr1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPARAPRRLVQGPRGTWLLGSLWVWVLCGLGMAGSLGTPQPCQAPQQWEGRQVLYQQSSGHNNRALVSYDGLNQRVRVLDERKALIPCKRLFEYILLYKEGVMFQIEQATKQCAKIPLVESWDPLDIPQNSTFEDQYSIGGPQEQILVQEWSDRRTARSYETWIGVYTAKDCYPVQETFIRNYTVVMSTRFFDVQLGIKDPSVFTPPSTCQAAQPEKMSDGCSL", "length": 224 }, "evidence": [ { "id": "A0A4X1UPP6", "url": "https://omabrowser.org/oma/group/A0A4X1UPP6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9UM22-1", "protein_name": "Mammalian ependymin-related protein 1", "gene_name": "EPDR1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPGRAPLRTVPGALGAWLLGGLWAWTLCGLCSLGAVGAPRPCQAPQQWEGRQVMYQQSSGRNSRALLSYDGLNQRVRVLDERKALIPCKRLFEYILLYKDGVMFQIDQATKQCSKMTLTQPWDPLDIPQNSTFEDQYSIGGPQEQITVQEWSDRKSARSYETWIGIYTVKDCYPVQETFTINYSVILSTRFFDIQLGIKDPSVFTPPSTCQMAQLEKMSEDCSW", "length": 224 }, "evidence": [ { "id": "A0A4X1UPP6", "url": "https://omabrowser.org/oma/group/A0A4X1UPP6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "ganglioside GM1 binding", "id": "GO:1905573", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905573", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UPP6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UPP6" } ], "pmid": "" }, { "name": "phospholipid binding", "id": "GO:0005543", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005543", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UPP6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UPP6" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UPP6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UPP6" } ], "pmid": "" }, { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UPP6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UPP6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UPP6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UPP6" } ], "pmid": "" }, { "name": "lysosome", "id": "GO:0005764", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005764", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UPP6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UPP6" } ], "pmid": "" }, { "name": "lysosomal lumen", "id": "GO:0043202", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043202", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UPP6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UPP6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "cell-matrix adhesion", "id": "GO:0007160", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007160", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UPP6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UPP6" } ], "pmid": "" }, { "name": "myofibroblast contraction", "id": "GO:1990764", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990764", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UPP6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UPP6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 140, "end_pos": 142, "annotation": "n_glycosylation_sequon" }, { "start_pos": 192, "end_pos": 194, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 140, "end_pos": 142 }, { "start_pos": 192, "end_pos": 194 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 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Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UPR0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UPR0#function" }, { "database": "UniProtKB", "id": "ARBA00025111", "url": "https://www.uniprot.org/uniprotkb/ARBA00025111#function" } ] }, { "annotation": "Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UPR0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UPR0#function" }, { "database": "UniProtKB", "id": "RU361145", "url": "https://www.uniprot.org/uniprotkb/RU361145#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UPR0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UPR0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LOC102162930", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UPR0", "locus": {} } ], "crossref": [ { "id": "A0A4X1UPR0", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1UPR0", "database": "AlphaFoldDB", "categories": [] }, { "id": "102162930", "url": 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"https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100154859", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154859", "resource": "KEGG Pathway" }, { "id": "R-SSC-917729", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-917729", "resource": "Reactome", "description": "Endosomal Sorting Complex Required For Transport (ESCRT)" } ], "orthologs": [ { "uniprot_canonical_ac": "B5DEN9-1", "protein_name": "Vacuolar protein sorting-associated protein 28 homolog", "gene_name": "Vps28", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFHGIPATPGVGALPCSVAAPGNKPELYEEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVTPNEYTAACSRLLVQYKAAFRQVQGSEISSIDEFCRKFRLDCPLAMERIKEDRPITIKDDKGNLNRCIADVVSLFITVMDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTVSQWLQTLSGMSASDELDDSQVRQMLFDLESAYNAFNRFLHS", "length": 228 }, "evidence": [ { "id": "A0A4X1UQN2", "url": "https://omabrowser.org/oma/group/A0A4X1UQN2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q02767-1", "protein_name": "Vacuolar protein sorting-associated protein 28", "gene_name": "VPS28", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MQKHNIKLNQNQDISQLFHDEVPLFDNSITSKDKEVIETLSEIYSIVITLDHVEKAYLKDSIDDTQYTNTVDKLLKQFKVYLNSQNKEEINKHFQSIEAFCDTYNITASNAITRLERGIPITAEHAISTTTSAPSGDNKQSSSSDKKFNAKYVAEATGNFITVMDALKLNYNAKDQLHPLLAELLISINRVTRDDFENRSKLIDWIVRINKLSIGDTLTETQIRELLFDLELAYKSFYALLD", "length": 242 }, "evidence": [ { "id": "A0A4X1UQN2", "url": "https://omabrowser.org/oma/group/A0A4X1UQN2/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q3T178-1", "protein_name": "Vacuolar protein sorting-associated protein 28 homolog", "gene_name": "VPS28", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": 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"common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9S9T7-1", "protein_name": "Vacuolar protein sorting-associated protein 28 homolog 2", "gene_name": "VPS28-2", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MMEVKLWNDKREREMYENFAELFAIIKATEKLEKAYIRDLINPSEYESECQKLIVHFKTLSATLKDTVPNIERFADTYKMDCPAALYRLVTSGLPATVEHRATVAASTSNSASIVAECVQNFITSMDSLKLNMVAVDQVYPLLSDLSASLNKLSILPPDFEGKTKMKEWLSRLSKMGAADELTEQQSRQLHFDLESSYNSFMAALPKAGN", "length": 210 }, "evidence": [ { "id": "A0A4X1UQN2", "url": "https://omabrowser.org/oma/group/A0A4X1UQN2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9UK41-1", "protein_name": "Vacuolar protein sorting-associated protein 28 homolog", "gene_name": "VPS28", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MFHGIPATPGIGAPGNKPELYEEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVSPSEYTAACSRLLVQYKAAFRQVQGSEISSIDEFCRKFRLDCPLAMERIKEDRPITIKDDKGNLNRCIADVVSLFITVMDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTVSQWLQTLSGMSASDELDDSQVRQMLFDLESAYNAFNRFLHA", "length": 221 }, "evidence": [ { "id": "A0A4X1UQN2", "url": "https://omabrowser.org/oma/group/A0A4X1UQN2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9V359-1", "protein_name": "Vacuolar protein sorting-associated protein 28 homolog", "gene_name": "Vps28", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MQEQSPELYEEVKLFRNAREREKYDNMADLYAIINTIQQLEKAYIRDCITPQEYTAACSKYLVQYKVAFKQVQCDEFPSVETFVKKFRLDCPAALERIREDRPITIRDDKGNTSKCIAEIVSLFITIMDKLRLQINTMDALQPDVKDLADNMNRLSLIPEDFDAKLKVEKWLGSLNEMQASDELSEGQVRQFLFDLESAYADFNKLLHSQ", "length": 210 }, "evidence": [ { "id": "A0A4X1UQN2", "url": "https://omabrowser.org/oma/group/A0A4X1UQN2/", "database": "OMA" } ], "glygen_name": "Fruit fly", 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Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UR05", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UR05" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100522893", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522893", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1AAB7-1", "protein_name": "Homeobox B13", "gene_name": "HOXB13", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": 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The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
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The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-983152", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983152" } ] }, { "id": "R-SSC-983156", "name": "Polyubiquitination of substrate", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
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The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. 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"https://www.ebi.ac.uk/interpro/entry/IPR038050", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "RKMINTR", "url": "https://omabrowser.org/oma/group/RKMINTR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR18945", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR18945", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02931", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02931", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02932", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02932", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "29463", "url": "https://www.rhea-db.org/rhea/29463", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "34963", "url": "https://www.rhea-db.org/rhea/34963", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1UT63", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UT63", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UT63-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UT63-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAGALLSALFLLQLLAPGRGSGKNEELRLYHHLFDNYDPGRRPVREPKDTVTVSLKVTLTNLISLNEKEETLTTSVWIGIDWSDYRLNYSKADFGGIETLRVPSELVWLPEIVLENNIDGQFGVAYEANVLVSEGGYVSWLPPAIYRSTCAVEVTYFPFDWQNCSLVFRSQTYSAEEVEFVFAVDDLGETISKLEIDTEAYTENGEWAIDFCPGVIRRHDGSSPDDPGDSDVTYTLIIRRKPLFYVINIIVPCVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKIPETSLSVPLLGRYLIFVMVVATLIVMNCVIVLNVSLRTPTTHTVSPRLRHVLLELLPPLLGFGEPPSPEAPRAASPPRRASSLGLLLRAEELILKKPRSELVFEGQRHRHGTWTAALCQSLGAAAPEIRCCVDAVNFVAESTREQEATGEEVSDWVRMGKALDNICFWAALVLFLVGSSLIFLGAYFNQVPKLPYPPCM", "length": 495, "header": "tr|A0A4X1UT63-1|A0A4X1UT63_PIG Isoform 1 of Acetylcholine receptor subunit epsilon OS=Sus scrofa OX=9823 GN=CHRNE PE=3 SV=1 CANONICAL=A0A4X1UT63-1" }, "isoforms": [ { "isoform_ac": "A0A4X1UT63-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UT63/entry", "sequence": { "sequence": "MAGALLSALFLLQLLAPGRGSGKNEELRLYHHLFDNYDPGRRPVREPKDTVTVSLKVTLTNLISLNEKEETLTTSVWIGIDWSDYRLNYSKADFGGIETLRVPSELVWLPEIVLENNIDGQFGVAYEANVLVSEGGYVSWLPPAIYRSTCAVEVTYFPFDWQNCSLVFRSQTYSAEEVEFVFAVDDLGETISKLEIDTEAYTENGEWAIDFCPGVIRRHDGSSPDDPGDSDVTYTLIIRRKPLFYVINIIVPCVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKIPETSLSVPLLGRYLIFVMVVATLIVMNCVIVLNVSLRTPTTHTVSPRLRHVLLELLPPLLGFGEPPSPEAPRAASPPRRASSLGLLLRAEELILKKPRSELVFEGQRHRHGTWTAALCQSLGAAAPEIRCCVDAVNFVAESTREQEATGEEVSDWVRMGKALDNICFWAALVLFLVGSSLIFLGAYFNQVPKLPYPPCM", "length": 495, "header": "tr|A0A4X1UT63-1|A0A4X1UT63_PIG Isoform 1 of Acetylcholine receptor subunit epsilon OS=Sus scrofa OX=9823 GN=CHRNE PE=3 SV=1 CANONICAL=A0A4X1UT63-1" }, "locus": { "chromosome": "12", "start_pos": 52015666, "end_pos": 52011279, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000019489.5", "url": "https://www.ensembl.org/id/ENSSSCT00000019489.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000018971.2", "url": "https://www.ensembl.org/id/ENSSSCP00000018971.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UT63", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UT63" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A2BG85-1", "protein_name": "Acetylcholine receptor subunit epsilon precursor", "gene_name": "chrne", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAVAERFGRTCVVAIALLATVLQVTGNEESQLIADKFKNYSKNIRPARHADEKVKVQVKLTLTNLISLNEKEETLTTNVWIEIQWHDYRLAWNTSEYHDIEQIRVPYYTVWLPDIVLENNIDGKFDVAYYANVLISSDGSMYWLPPAIYRSTCAIEITYFPFDWQNCTLVFRSQTYSANEIDIVLAEDENGKPIEWVDIDPEAFTENGEWAIKHRPARKLTNQRYSPDDLEYQEVYYNIIIQRKPLFYVINIILPCSLISSLVVLAYFLPAKAGGQKLTVSISVLLAQTVFLILISQKIPETSLSVPLIGKYLIFVMSMTTLIVTNCIIVLNYSLRSPSTHNMSQSIKHIFLEVVPRYLGMAPFVDEGDQGGVYEMRERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHGLMRTIVDEIDVSSTANLYKSLAKTAPEIKECVDACNFIAESTKQQNDTGSEMESWVLIGKMIDKVCFWAAISLFSIGTIAIFLMGHYNQAPEYPFAWENKKYVPE", "length": 517 }, "evidence": [ { "id": "A0A4X1UT63", "url": "https://omabrowser.org/oma/group/A0A4X1UT63/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "P02715-1", "protein_name": "Acetylcholine receptor subunit epsilon", "gene_name": "CHRNE", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAGALLCALLLLQLLGRGEGKNEELRLYHYLFDTYDPGRRPVQEPEDTVTISLKVTLTNLISLNEKEETLTTSVWIGIDWQDYRLNYSKGDFGGVETLRVPSELVWLPEIVLENNIDGQFGVAYEANVLVSEGGYLSWLPPAIYRSTCAVEVTYFPFDWQNCSLVFRSQTYNAEEVEFVFAVDDEGKTISKIDIDTEAYTENGEWAIDFCPGVIRRHDGDSAGGPGETDVIYSLIIRRKPLFYVINIIVPCVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKTPETSLSVPLLGRYLIFVMVVATLIVMNCVIVLNVSLRTPTTHAMSPRLRYVLLELLPQLLGSGAPPEIPRAASPPRRASSLGLLLRAEELILKKPRSELVFEQQRHRHGTWTATLCQNLGAAAPEIRCCVDAVNFVASSTRDQEATGEEVSDWVRMGKALDSICFWAALVLFLVGSSLIFLGAYFNRVPQLPYPPCM", "length": 491 }, "evidence": [ { "id": "A0A4X1UT63", "url": "https://omabrowser.org/oma/group/A0A4X1UT63/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P09660-1", "protein_name": "Acetylcholine receptor subunit 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"id": "A0A4X1UT63", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UT63" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UT63", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UT63" } ], "pmid": "" }, { "name": "acetylcholine-gated channel complex", "id": "GO:0005892", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005892", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UT63", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UT63" } ], "pmid": "" }, { "name": "neuromuscular junction", "id": "GO:0031594", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031594", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UT63", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UT63" } ], "pmid": "" }, { "name": "synapse", "id": "GO:0045202", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045202", 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"https://www.genome.jp/dbget-bin/www_bget?ssc:100154665", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DSINMID", "url": "https://omabrowser.org/oma/group/DSINMID/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1UUJ9", "url": "https://www.orthodb.org/?gene=A0A4X1UUJ9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13116", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13116", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13116:SF10", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13116:SF10", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01956", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01956", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8980692", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8980692", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003358565", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358565", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1UUJ9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UUJ9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UUJ9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UUJ9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAGPELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRENGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQSRMMQEQMTGAAVAMPADTNKAFKTEWEALELTDHQWALDDVEEELMAKDLHFEGMFKKELQTSIF", "length": 261, "header": "tr|A0A4X1UUJ9-1|A0A4X1UUJ9_PIG Isoform 1 of ER membrane protein complex subunit 3 OS=Sus scrofa OX=9823 GN=EMC3 PE=1 SV=1 CANONICAL=A0A4X1UUJ9-1" }, "isoforms": [ { "isoform_ac": "A0A4X1UUJ9-1", "url": 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"sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1UV74-1", "uniprot_ac": "A0A4X1UV74", "uniprot_id": "A0A4X1UV74_PIG", "mass": { "chemical_mass": 73895.0, "monoisotopic_mass": 73895.0 }, "refseq": { "ac": "XP_020936972", "name": "sodium/myo-inositol cotransporter 2 isoform X3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020936972" }, "gene_names": [ { "name": "SLC5A11", "type": "recommended", "evidence": [ { "id": "A0A4X1UV74", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UV74" } ] }, { "name": "SLC5A11", "type": "synonym", "evidence": [ { "id": "XP_020936972", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020936972" } ] }, { "name": "SMIT2", "type": "synonym", "evidence": [ { "id": "XP_020936972", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020936972" } ] } ], "protein_names": [ { "name": "Sodium/myo-inositol cotransporter 2", "type": "recommended", "evidence": [ { "id": "A0A4X1UV74", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UV74/entry#names_and_taxonomy" } ] }, { "name": "Sodium/myo-inositol transporter 2", "type": "synonym", "evidence": [ { "id": "A0A4X1UV74", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UV74/entry#names_and_taxonomy" } ] }, { "name": "Solute carrier family 5 member 11", "type": "synonym", "evidence": [ { "id": "A0A4X1UV74", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UV74/entry#names_and_taxonomy" } ] }, { "name": "sodium/myo-inositol cotransporter 2 isoform X3", "type": "synonym", "evidence": [ { "id": "XP_020936972", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020936972" } ] } ], "function": [ { "annotation": "Involved in the sodium-dependent cotransport of myo-inositol (MI) with a Na(+):MI stoichiometry of 2:1. Exclusively responsible for apical MI transport and absorption in intestine. Can also transport D-chiro-inositol (DCI) but not L-fucose. Exhibits stereospecific cotransport of both D-glucose and D-xylose. May induce apoptosis through the TNF, PDCD1 pathway. May play a role in the regulation of MI concentration in serum, involving reabsorption in at least the proximal tubule of the kidney.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UV74", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UV74#function" }, { "database": "UniProtKB", "id": "ARBA00094378", "url": "https://www.uniprot.org/uniprotkb/ARBA00094378#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UV74", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UV74" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SLC5A11", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UV74", "locus": {} } ], "crossref": [ { "id": "100126275", "url": "https://www.ncbi.nlm.nih.gov/gene/100126275", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001734", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001734", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038377", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038377", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "NWVFVAK", "url": "https://omabrowser.org/oma/group/NWVFVAK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR11819", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11819", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11819:SF171", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11819:SF171", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00474", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00474", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-429593", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-429593", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020936972", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020936972", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "70495", "url": "https://www.rhea-db.org/rhea/70495", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "72987", "url": "https://www.rhea-db.org/rhea/72987", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "73315", "url": "https://www.rhea-db.org/rhea/73315", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "73367", "url": "https://www.rhea-db.org/rhea/73367", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1UV74", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UV74", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UV74-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UV74-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MESSPSSPQPTQSDPLAVFPQRTLEPADIAVLVLYFLFVLAVGLWSTVKTRRDTVKGYFLAGGDMVWWPVGASLFASNVGSGHFVGLAGSGAAAGLSVTAYEFNGIFSVLMLAWIFLPIYIAGQVTTMPEYLRKRFGGSRIPITLAVLYLFIYIFTKISVDMYAGAIFIQQSLHLNLYLAIVGLLAITALYTIAGGLAAVIYTDALQTLIMLIGALTLMGYSFAAVGGMEGLKEKYFLALASNRSGNSSCGLPREDAFHIFRDPLTSDLPWPGILFGMSIPSLWYWCTDQVIVQRTLAAKNLSHAKGGSLMAAYLKVLPLFIMVFPGMVSRVLFPDQVACADPEICQKVCSNPAGCSDIAYPKLVLELLPMGLRGLMMAVMVAALMSSLTSIFNSASTIFTMDLWNHLRPRASERELMIVGRVFVLLLVLVSILWIPVVQASQGGQLFIYIQSISSYLQPPVAVVFIMGCFWKRTNEKGAFSGLILGLLLGLIRLVLDFIYPQPRCDQPDERPAVVRDVHYLYFSMILSSVTLVTVSTVSWCTAPPTQEMVSRLTWFTRHDPIVLKEQVPSATPVPVTVSQNGTPEASSTNIQFEIVQENTSKTHSCDMTKKQSKVVKTILWLCGMESKGKEEPPSRADPVIVSLEEIPLVKTLLDINLIVCISCAIFLWGYFA", "length": 674, "header": "tr|A0A4X1UV74-1|A0A4X1UV74_PIG Isoform 1 of Sodium/myo-inositol cotransporter 2 OS=Sus scrofa OX=9823 GN=SLC5A11 PE=3 SV=1 CANONICAL=A0A4X1UV74-1" }, "isoforms": [ { "isoform_ac": "A0A4X1UV74-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UV74/entry", "sequence": { "sequence": "MESSPSSPQPTQSDPLAVFPQRTLEPADIAVLVLYFLFVLAVGLWSTVKTRRDTVKGYFLAGGDMVWWPVGASLFASNVGSGHFVGLAGSGAAAGLSVTAYEFNGIFSVLMLAWIFLPIYIAGQVTTMPEYLRKRFGGSRIPITLAVLYLFIYIFTKISVDMYAGAIFIQQSLHLNLYLAIVGLLAITALYTIAGGLAAVIYTDALQTLIMLIGALTLMGYSFAAVGGMEGLKEKYFLALASNRSGNSSCGLPREDAFHIFRDPLTSDLPWPGILFGMSIPSLWYWCTDQVIVQRTLAAKNLSHAKGGSLMAAYLKVLPLFIMVFPGMVSRVLFPDQVACADPEICQKVCSNPAGCSDIAYPKLVLELLPMGLRGLMMAVMVAALMSSLTSIFNSASTIFTMDLWNHLRPRASERELMIVGRVFVLLLVLVSILWIPVVQASQGGQLFIYIQSISSYLQPPVAVVFIMGCFWKRTNEKGAFSGLILGLLLGLIRLVLDFIYPQPRCDQPDERPAVVRDVHYLYFSMILSSVTLVTVSTVSWCTAPPTQEMVSRLTWFTRHDPIVLKEQVPSATPVPVTVSQNGTPEASSTNIQFEIVQENTSKTHSCDMTKKQSKVVKTILWLCGMESKGKEEPPSRADPVIVSLEEIPLVKTLLDINLIVCISCAIFLWGYFA", "length": 674, "header": "tr|A0A4X1UV74-1|A0A4X1UV74_PIG Isoform 1 of Sodium/myo-inositol cotransporter 2 OS=Sus scrofa OX=9823 GN=SLC5A11 PE=3 SV=1 CANONICAL=A0A4X1UV74-1" }, "locus": { "chromosome": "AEMK02000510.1", "start_pos": 543456, "end_pos": 476527, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045906.2", "url": "https://www.ensembl.org/id/ENSSSCT00000045906.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000039880.1", "url": "https://www.ensembl.org/id/ENSSSCP00000039880.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 11, "start_aa": "Thr", "end_pos": 11, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr11", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UV74", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UV74" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-429593", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-429593", "resource": "Reactome", "description": "Inositol transporters" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q2U0A6-1", "protein_name": "Sodium/myo-inositol cotransporter 2", "gene_name": "SLC5A11", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPRGSTHPAQGAMESTSSTPSSVTPQWDVFPQKTLGPIDITILVLYFVFVLAVGLWSMWKTQRSTVKGYFLAGGQMVWWPVGASLFASNVGSGHFIGLAGSGAASGIAATAYEWNGMFSVLVLAWLFLPIYIAAGVTTMPEYLQKRFGGKRIQIFLAILYLFIYIFTKISVDMYAGALFIQQALHWDLYIAVAGLLAITAVYTVAGGLAAVIYTDALQTLIMLIGAISLMVFSFVEVGGLEGLQAKYFDAIPSTRKENSSCGLPREDAFHIFRDPVNSDLPWPGVLVGMTIPSLWYWCTDQVIVQRSLAAKNLSHAKGGSLMTSYLKILPLFMMVMPGMISRVLFPDLVACAEPEICQKICGNPSGCSDIAYPKLVIELLPVGLRGLMMAVMIAALMSSLTSIFNSASTIFTMDLWKHFRPRCSEWELMIVGRVFVLLLTVVSILWIPLVQAGQGGQLFIYIQSISSYLQPPVAMVFILGCFWKRANEKGAFWGLVLGLLMGVIRMVLDFIFPEPQCGERDTRPGVLRYMHYLYFSMVLAAASTLTVLLVSLLTEPPSEEMISRLTWFTRGDPPAKKDLSVSTSPDTAKGAREAERPALQIDISIASENSTNDNKCPTGTKKDSKLVRTLLWLCGMERRQENPEDVAPAKPERPMASLEENPLVKHILNINLILSICAGVFLWAYFA", "length": 687 }, "evidence": [ { "id": "A0A4X1UV74", "url": "https://omabrowser.org/oma/group/A0A4X1UV74/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q3ZC26-1", "protein_name": "Sodium/myo-inositol cotransporter 2", "gene_name": "SLC5A11", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MESSASSPPLTQSDPLEAFPRRTLEAGDIAVLVLYFLFVLAVGLWSTVKTKRDTVKGYFLAGGNMLWWPVGASLFASNVGSGHFVGLAGSGAAAGLSVTAYELNGLFFVLMLSWIFLPIYITGQVTTMPEYLRKRFGGNRIPIILAVLYLFIYIFTKISVDMYAGAIFIQQSLHVNLYLAIVGLLAVTALYTIAGGLAAVIYTDALQTLIMLIGALILMGYSFAAVGGLEGLEEKYFLAMASNRSGNSSCGLPREDAFHIFRDPVTSDLPWPGILFGMSIPSLWYWCTDQVIVQRTLAAKNLSHAKGGSLMAAYLKVLPLFIMVFPGMVSRVLFPDEVACADPEICRKVCSNPAGCSDIAYPKLVLELLPTGLRGLMMAVMVAALTSSLTSIFNSASTIFTMDLWNHLRPRASEKELMIVGRVFVLLLVLVSILWIPVVQASQGGQLFIYIQSISSYLQPPVAVVFIMGCFWKRANEKGAFFGLVLGLLLGLVRLILDFIYVQPRCDQLDERPAVVKDVHYLYFSMILSSVTLITVCAVSWFTEPPSKEMVSRLTWFTRHDPVVQKEQVPSATPPPLTLSQNGTPEASGTNTQFEMVQENLSKTHSCDMTTKRSKVVKAILWLCGVENKGKEQAPSRADPIIVSLEENPLVKTLLDLNLIICISCAIFLWGYFA", "length": 674 }, "evidence": [ { "id": "A0A4X1UV74", "url": "https://omabrowser.org/oma/group/A0A4X1UV74/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8K0E3-1", "protein_name": "Sodium/myo-inositol cotransporter 2", "gene_name": "Slc5a11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESATISPQPPQSDSLEAFPQKSMEPADIAVLVLYFLFVLAVGLWSTVRTKRDTVKGYFLAGGDMVWWPVGASLFASNVGSGHFIGLAGSGAAVGISVAAYELNGLFSVLMLAWVFLPIYIAGQVTTMPEYLRRRFGGNRISITLAVLYLFIYIFTKISVDMYAGAIFIQQSLHLDLYLAIVGLLAITALYTVAGGLAAVIYTDALQTVIMLIGAFILMGYSFAAVGGMEGLKDQYFLALASNRSENSSCGLPREDAFHIFRDPLTSDLPWPGILFGMSIPSLWYWCTDQVIVQRSLAAKNLSHAKGGSLMAAYLKVLPLFLMVFPGMVSRVLFPDQVACAHPDICQRVCSNPSGCSDIAYPKLVLELLPTGLRGLMMAVMVAALMSSLTSIFNSASTIFTMDLWNHIRPRASERELMIVGRIFVFALVLVSILWIPIVQASQGGQLFIYIQSISSYLQPPVAMVFIMGCFWKRTNEKGAFSGLILGLLLGLVRLILDFVYAQPRCDQPDDRPAVVKDVHYLYFSMILSFTTLITVVTVSWFTETPSKEMVSRLTWFTRHEPVAQKDSAPPETPLSLTLSQNGTTEAPGTSIQLETVQESTTKACGDGVSPRHSKVVRAILWLCGMEKNKEEPPSKAEPVIVSLEENPLVKTLLDVNCIVCISCAIFLWGYFA", "length": 673 }, "evidence": [ { "id": "A0A4X1UV74", "url": "https://omabrowser.org/oma/group/A0A4X1UV74/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8WWX8-1", "protein_name": "Sodium/myo-inositol cotransporter 2", "gene_name": "SLC5A11", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MESGTSSPQPPQLDPLDAFPQKGLEPGDIAVLVLYFLFVLAVGLWSTVKTKRDTVKGYFLAGGDMVWWPVGASLFASNVGSGHFIGLAGSGAATGISVSAYELNGLFSVLMLAWIFLPIYIAGQVTTMPEYLRKRFGGIRIPIILAVLYLFIYIFTKISVDMYAGAIFIQQSLHLDLYLAIVGLLAITAVYTVAGGLAAVIYTDALQTLIMLIGALTLMGYSFAAVGGMEGLKEKYFLALASNRSENSSCGLPREDAFHIFRDPLTSDLPWPGVLFGMSIPSLWYWCTDQVIVQRTLAAKNLSHAKGGALMAAYLKVLPLFIMVFPGMVSRILFPDQVACADPEICQKICSNPSGCSDIAYPKLVLELLPTGLRGLMMAVMVAALMSSLTSIFNSASTIFTMDLWNHLRPRASEKELMIVGRVFVLLLVLVSILWIPVVQASQGGQLFIYIQSISSYLQPPVAVVFIMGCFWKRTNEKGAFWGLISGLLLGLVRLVLDFIYVQPRCDQPDERPVLVKSIHYLYFSMILSTVTLITVSTVSWFTEPPSKEMVSHLTWFTRHDPVVQKEQAPPAAPLSLTLSQNGMPEASSSSSVQFEMVQENTSKTHSCDMTPKQSKVVKAILWLCGIQEKGKEELPARAEAIIVSLEENPLVKTLLDVNLIFCVSCAIFIWGYFA", "length": 675 }, "evidence": [ { "id": "A0A4X1UV74", "url": "https://omabrowser.org/oma/group/A0A4X1UV74/", "database": "OMA" } ], 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"glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2RKZ8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RKZ8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100517665", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517665", "resource": "KEGG Pathway" }, { "id": "R-SSC-9768727", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9768727", "resource": "Reactome", "description": "Regulation of CDH1 posttranslational processing and trafficking to plasma membrane" }, { "id": "R-SSC-9931295", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9931295", "resource": "Reactome", "description": "PD-L1(CD274) glycosylation and translocation to plasma membrane" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2LXK8-1", "protein_name": "Oligosaccharyltransferase complex subunit", "gene_name": "Ostc", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "METLYRVPFLVLECPNLKLKKPPWVHMPSAMTVYALVVVSYFLITGGIIYDVIVEPPSVGSMTDEHGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNAPNIPKLNRFLLLFIGFVCVLLSFFMARVFMRMKLPGYLMG", "length": 149 }, "evidence": [ { "id": "A0A4X1UWE1", "url": 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"categories": [ "Protein Classification", "Other" ] }, { "id": "PF07525", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07525", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8951664", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8951664", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-983168", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983168", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1UWX4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UWX4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UWX4-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UWX4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGQTALAGGSSSTPTPQPLYPDLSCPEGLEELLSAPPPDLGAQRRHGWNPKDCSENIEVKEGGLCFERRPVAQSTDGVRGKRGYSRGLHAWEISWPREQRGTHAVVGVATALAPLQADHYAALLGSNSESWGWDIGRGKLYHQSKGPGAPRYPPGLQGEHLEVPERLLVVLDMEEGTLGYAIGGTYLGPAFRGLKGRTLYPAVSAVWGQCHVRISYLGERRAEPHSLLHLSRLCVRHALGATRLGYVSALPLPPAMKRYLLYQ", "length": 263, "header": "tr|A0A4X1UWX4-1|A0A4X1UWX4_PIG Isoform 1 of SPRY domain-containing SOCS box protein 2 OS=Sus scrofa OX=9823 GN=SPSB2 PE=3 SV=1 CANONICAL=A0A4X1UWX4-1" }, "isoforms": [ { "isoform_ac": "A0A4X1UWX4-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UWX4/entry", "sequence": { "sequence": "MGQTALAGGSSSTPTPQPLYPDLSCPEGLEELLSAPPPDLGAQRRHGWNPKDCSENIEVKEGGLCFERRPVAQSTDGVRGKRGYSRGLHAWEISWPREQRGTHAVVGVATALAPLQADHYAALLGSNSESWGWDIGRGKLYHQSKGPGAPRYPPGLQGEHLEVPERLLVVLDMEEGTLGYAIGGTYLGPAFRGLKGRTLYPAVSAVWGQCHVRISYLGERRAEPHSLLHLSRLCVRHALGATRLGYVSALPLPPAMKRYLLYQ", "length": 263, "header": "tr|A0A4X1UWX4-1|A0A4X1UWX4_PIG Isoform 1 of SPRY domain-containing SOCS box protein 2 OS=Sus scrofa OX=9823 GN=SPSB2 PE=3 SV=1 CANONICAL=A0A4X1UWX4-1" }, "locus": { "chromosome": "5", "start_pos": 63838959, "end_pos": 63837193, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037607.2", "url": "https://www.ensembl.org/id/ENSSSCT00000037607.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045183.2", "url": "https://www.ensembl.org/id/ENSSSCP00000045183.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UWX4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UWX4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-8951664", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8951664", "resource": "Reactome", "description": "Neddylation" }, { "id": "R-SSC-983168", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983168", "resource": "Reactome", "description": "Antigen processing: Ubiquitination & Proteasome degradation" } ], "orthologs": [ { "uniprot_canonical_ac": "G3GUP8-1", "protein_name": "SPRY domain-containing SOCS box protein 2", "gene_name": "Spsb2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": 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protein 1 OS=Sus scrofa OX=9823 GN=GPIHBP1 PE=1 SV=1 CANONICAL=A0A4X1UWX5-1" }, "locus": { "chromosome": "4", "start_pos": 1256522, "end_pos": 1254700, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059626.2", "url": "https://www.ensembl.org/id/ENSSSCT00000059626.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036748.1", "url": "https://www.ensembl.org/id/ENSSSCP00000036748.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Cloning of porcine GPIHBP1 gene and its tissue expression pattern and genetic effect on adipose traits.", "journal": "Gene", "date": "2015-02-25", "authors": "Xu Huaming, Tao Xuelian, Wei Yingying, Chen Jianning, Xing Shuhua, Cen Wangmin, Wen Anxiang, Zhu Li, Tang Guoqing, Li Mingzhou, Jiang Anan, Jiang Yanzhi, Li Xuewei", "evidence": [ { "database": "RefSeq", "id": "NP_001295755", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001295755" } ], 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] }, { "name": "Methyltransferase-like protein 21A", "type": "synonym", "evidence": [ { "id": "A0A4X1UXV9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UXV9/entry#names_and_taxonomy" } ] }, { "name": "protein N-lysine methyltransferase METTL21A isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003133659", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003133659" } ] } ], "function": [ { "annotation": "Protein-lysine methyltransferase that selectively trimethylates residues in heat shock protein 70 (HSP70) family members. Contributes to the in vivo trimethylation of Lys residues in HSPA1 and HSPA8. In vitro methylates 'Lys-561' in HSPA1, 'Lys-564' in HSPA2, 'Lys-585' in HSPA5, 'Lys-563' in HSPA6 and 'Lys-561' in HSPA8.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UXV9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UXV9#function" }, { "database": "UniProtKB", "id": "ARBA00053111", "url": "https://www.uniprot.org/uniprotkb/ARBA00053111#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UXV9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UXV9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "METTL21A", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UXV9", "locus": { "chromosome": "15", "start_pos": 110763382, "end_pos": 110789466, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000036466", "url": "https://www.ensembl.org/id/ENSSSCG00000036466" } ] } } ], "crossref": [ { "id": "A0A4X1UXV9", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1UXV9", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000036466", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000036466", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100518583", "url": "https://www.ncbi.nlm.nih.gov/gene/100518583", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR019410", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019410", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029063", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029063", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100518583", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518583", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LFWELCD", "url": "https://omabrowser.org/oma/group/LFWELCD/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1UXV9", "url": "https://www.orthodb.org/?gene=A0A4X1UXV9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14614", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14614", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14614:SF14", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14614:SF14", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF10294", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10294", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8876725", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8876725", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003133659", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003133659", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "54192", "url": "https://www.rhea-db.org/rhea/54192", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1UXV9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UXV9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UXV9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UXV9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QQ98", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQ98", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QQ98-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQ98-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R756", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R756", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R756-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R756-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MALVPYEETAGMGLQRFHKPLATFSFANHRIQIQQDWKQLGVAAVVWDAAVVLSTYLEMGAVELRGCSAVELGAGTGLVGIVAALLGAHVTITDRKVALEFLKSNVQANLPPHIQPKAVVKELTWGQNLGSFSPGEFDLILGADIIYLEETFTDLLRTLEHLCSNHSVILLACRIRYERDHNFLAMLERQFTVSKVHYDPEKDVHIYKAQKRNLREDL", "length": 218, "header": "tr|A0A4X1UXV9-1|A0A4X1UXV9_PIG Isoform 1 of Protein N-lysine methyltransferase METTL21A OS=Sus scrofa OX=9823 GN=METTL21A PE=3 SV=1 CANONICAL=A0A4X1UXV9-1" }, "isoforms": [ { "isoform_ac": "A0A4X1UXV9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UXV9/entry", "sequence": { "sequence": "MALVPYEETAGMGLQRFHKPLATFSFANHRIQIQQDWKQLGVAAVVWDAAVVLSTYLEMGAVELRGCSAVELGAGTGLVGIVAALLGAHVTITDRKVALEFLKSNVQANLPPHIQPKAVVKELTWGQNLGSFSPGEFDLILGADIIYLEETFTDLLRTLEHLCSNHSVILLACRIRYERDHNFLAMLERQFTVSKVHYDPEKDVHIYKAQKRNLREDL", "length": 218, "header": "tr|A0A4X1UXV9-1|A0A4X1UXV9_PIG Isoform 1 of Protein N-lysine methyltransferase METTL21A OS=Sus scrofa OX=9823 GN=METTL21A PE=3 SV=1 CANONICAL=A0A4X1UXV9-1" }, "locus": { "chromosome": "15", "start_pos": 110788531, "end_pos": 110779388, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060380.3", "url": "https://www.ensembl.org/id/ENSSSCT00000060380.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031814.1", "url": "https://www.ensembl.org/id/ENSSSCP00000031814.1" } ] } }, { "isoform_ac": "A0A5G2QQ98-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQ98/entry", "sequence": { "sequence": "MALVPYEETAGMGLQRFHKPLATFSFANHRIQIQQDWKQLGVAAVVWDAVLM", "length": 52, "header": "tr|A0A5G2QQ98-1|A0A4X1UXV9_PIG Computationally mapped isoform of Protein N-lysine methyltransferase METTL21A OS=Sus scrofa OX=9823 GN=METTL21A PE=3 SV=1 CANONICAL=A0A4X1UXV9-1" }, "locus": { "chromosome": "15", "start_pos": 110788531, "end_pos": 110779774, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076715.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076715.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066902.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066902.1" } ] } }, { "isoform_ac": "A0A5G2R756-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R756/entry", "sequence": { "sequence": "MALVPYEETAGMGLQRFHKPLATFSFANHRIQIQQDWKQLGVAAVVWDAAVVLSTYLEMGAVELRGCSAVELGAGTGLVGIVAALLGGRV", "length": 90, "header": "tr|A0A5G2R756-1|A0A4X1UXV9_PIG Computationally mapped isoform of Protein N-lysine methyltransferase METTL21A OS=Sus scrofa OX=9823 GN=METTL21A PE=3 SV=1 CANONICAL=A0A4X1UXV9-1" }, "locus": { "chromosome": "15", "start_pos": 110788531, "end_pos": 110763385, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072632.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072632.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072910.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072910.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QQ98", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQ98" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100518583", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518583", "resource": "KEGG Pathway" }, { "id": "R-SSC-8876725", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8876725", "resource": "Reactome", "description": "Protein methylation" } ], "orthologs": [ { "uniprot_canonical_ac": "A4FV42-1", "protein_name": "Protein N-lysine methyltransferase METTL21A", "gene_name": "METTL21A", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MALVPYTETAEMGLQRFHKPLATFSFANHTIQIRQDWKQLGVAAVVWDAAVVLATYLEMGTVELRGCSAVELGAGTGLVGIVAALLGAHVTITDRKVALEFLKSNVQANLPPHIQPKAVVKELTWGQNLGRFSPGEFDLILGADIIYLEETFTDLLQTLEHLCSNHSVVLLACRIRYERDYNFLAMLERQFTVSKVHYDSEKDVHIYKAQRRCLREDL", "length": 218 }, "evidence": [ { "id": "A0A4X1UXV9", "url": "https://omabrowser.org/oma/group/A0A4X1UXV9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "D4A8Z5-1", "protein_name": "Protein N-lysine methyltransferase METTL21A", "gene_name": "Mettl21a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALVPYEESMSIGLQKLHKPLATFSFANHTIQIRQDWGRLGVAAVVWDAAIVLSTYLEMGAVELRGCSAVELGAGTGLVGIVAALLGAHVTITDRKVALEFLKSNVEANLPPHIQPKVVVKELTWGQNLDSFSPGEFDLILGADIIYLEDTFTDLLQTLGHLCSNNSVILLACRIRYERDNNFLTMLERQFTVSKVHYDPEKDVHIYKAQKRKQREDL", "length": 218 }, "evidence": [ { "id": "A0A4X1UXV9", "url": "https://omabrowser.org/oma/group/A0A4X1UXV9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1NVP6-1", "protein_name": "Protein N-lysine methyltransferase METTL21A", "gene_name": "METTL21A", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVPYEEGRALQGLRRPTATYRFAGRTVRIRQDWERRGVAAVVWDAAVVLSAYLEMGGIDLRDRSVIELGAGTGLLGIVATLLGARVTITDREPALEFLESNVWANLPSELHARAVVKELTWGKDLGSFPPGAFDFILGADIIYLEETFAELLRTLEHLCSEQTVILLSCRIRYERDNNFLKMLKGRFSVSEVHYDYSKDVHIYKAQRHSHNDDF", "length": 216 }, "evidence": [ { "id": "A0A4X1UXV9", "url": "https://omabrowser.org/oma/group/A0A4X1UXV9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3HU65-1", "protein_name": "Protein N-lysine methyltransferase METTL21A", "gene_name": "Mettl21a", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MALVPYEESMEIGLQKFHKPLATFSFANHTIQIRQDWRQLGVAAVVWDAAIVLSTYLEMGAVELRGCSVVELGAGTGLVGIVAALLGAHVTITDRQVALEFLKSNVEANLPPHIQPKVVVKELTWGQNLESFSPGEFDLILGADVIYLEDTFTDLLQTLGHLCSSRSVILLACRIRYERDNNFLMMLERQFTVNKVHYDPEKDVHIYKAQKTDQREDL", "length": 218 }, "evidence": [ { "id": "A0A4X1UXV9", "url": "https://omabrowser.org/oma/group/A0A4X1UXV9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q5BLD8-1", "protein_name": "Protein N-lysine methyltransferase METTL21A", "gene_name": "mettl21a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MALVPYDENVLPALSKLHQSSAEFTLANHRIRLSQDWKRLGVAAVVWDAAVVLCMFLEMGKVDLKGKRVIELGAGTGLVGIVAALLGANVTITDREPALEFLTANVHENIPQGRQKAVQVSELTWGENLDLYPQGGYDLILGADIVYLEETFPALLQTLEHLSSGDTVVLLSCRIRYERDERFLTELRQRFSVQEVHYDSQRDIHVYRAVKNKSNTEL", "length": 218 }, "evidence": [ { "id": "A0A4X1UXV9", "url": "https://omabrowser.org/oma/group/A0A4X1UXV9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8WXB1-1", "protein_name": "Protein N-lysine methyltransferase METTL21A", "gene_name": "METTL21A", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MALVPYEETTEFGLQKFHKPLATFSFANHTIQIRQDWRHLGVAAVVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIVAALLGAHVTITDRKVALEFLKSNVQANLPPHIQTKTVVKELTWGQNLGSFSPGEFDLILGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRYERDNNFLAMLERQFTVRKVHYDPEKDVHIYEAQKRNQKEDL", "length": 218 }, "evidence": [ { "id": "A0A4X1UXV9", "url": "https://omabrowser.org/oma/group/A0A4X1UXV9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9CQL0-1", "protein_name": "Protein N-lysine methyltransferase METTL21A", "gene_name": "Mettl21A", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALVPYEESAAIGLQKFHKPLATFSFANHTIQIRQDWRQLGVAAVVWDAAVVLSMYLEMGAVELRGCSAVELGAGTGLVGIVAALLGAQVTITDRKVALEFLKSNVEANLPPHIQPKAVVKELTWGQNLESFSPGEFDLILGADVIYLEDTFTDLLQTLGHLCSNNSVILLACRIRYERDSNFLTMLERQFTVSKVHYDPEKDVHIYKAQKRNQREDL", "length": 218 }, "evidence": [ { "id": "A0A4X1UXV9", "url": "https://omabrowser.org/oma/group/A0A4X1UXV9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9FFH2-1", "protein_name": "S-adenosyl-L-methionine-dependent methyltransferases superfamily protein", "gene_name": "MLN1.9", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKFTDSPVIDLTVNGTKLSIQQDNGSMHVGTSVWPCSLILSKFAERWSTLDSSSSTTSPNPYAELFDFRRRRGIELGTGCGVAGMAFYLLGLTEIVLTDIAPVMPALKHNLKRNKTALGKSLKTSIVYWNNRDQISALKPPFDLVIAADVVYIEESVGQLVTAMELLVADDGAVLLGYQIRSPEADKLFWELCDIVFKIEKVPHEHLHSDYAYEETDVYIFRKKVKKNEAESVS", "length": 234 }, "evidence": [ { "id": "A0A4X1UXV9", "url": "https://omabrowser.org/oma/group/A0A4X1UXV9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UXV9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UXV9" } ], "pmid": "" }, { "name": "protein-containing complex", "id": "GO:0032991", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032991", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UXV9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UXV9" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UXV9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UXV9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "ATPase binding", "id": "GO:0051117", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051117", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UXV9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UXV9" } ], "pmid": "" }, { "name": "Hsp70 protein binding", "id": "GO:0030544", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030544", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UXV9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UXV9" } ], "pmid": "" }, { "name": "protein-lysine N-methyltransferase activity", "id": "GO:0016279", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016279", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UXV9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UXV9" } ], "pmid": "" }, { "name": "methyltransferase activity", "id": "GO:0008168", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008168", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UXV9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UXV9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UXV9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UXV9" } ], "pmid": "" }, { "name": "negative regulation of protein folding", "id": "GO:1903333", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1903333", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UXV9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UXV9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 165, "end_pos": 167, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "54192", "name": "", "equation": "L-lysyl-[protein] + 3 S-adenosyl-L-methionine = N(6),N(6),N(6)-trimethyl-L-lysyl-[protein] + 3 S-adenosyl-L-homocysteine + 3 H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "54192", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/54192" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 165, "end_pos": 167 } ] }, 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"expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UZQ8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZQ8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RPF1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZQ8", "locus": { "chromosome": "6", "start_pos": 129256042, "end_pos": 129271043, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000022145", "url": "https://www.ensembl.org/id/ENSSSCG00000022145" } ] } } ], "crossref": [ { "id": "A0A4X1UZQ8", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1UZQ8", "database": "AlphaFoldDB", "categories": [] }, { "id": "100620426", "url": "https://www.ncbi.nlm.nih.gov/gene/100620426", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007109", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007109", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044281", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044281", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100620426", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100620426", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "AWIISNK", "url": "https://omabrowser.org/oma/group/AWIISNK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1UZQ8", "url": "https://www.orthodb.org/?gene=A0A4X1UZQ8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR22734", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22734", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22734:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22734:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04427", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04427", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020952015", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020952015", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1UZQ8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZQ8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UZQ8-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZQ8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAKAGDKNGGGGKKGLKRKAATLEPQEAAVSEDGTTESGVQPTTAAAFPPGFSISEIKNKQRRHLMFTRWKQQQRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVYDETIVDPNDEEVAYDEATDEFASYFNRQTCPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCISRDFTDLIVINEDRKIPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHTPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIFKSEKKVGIQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL", "length": 349, "header": "tr|A0A4X1UZQ8-1|A0A4X1UZQ8_PIG Isoform 1 of Ribosome production factor 1 OS=Sus scrofa OX=9823 GN=RPF1 PE=4 SV=1 CANONICAL=A0A4X1UZQ8-1" }, "isoforms": [ { "isoform_ac": "A0A4X1UZQ8-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZQ8/entry", "sequence": { "sequence": "MAKAGDKNGGGGKKGLKRKAATLEPQEAAVSEDGTTESGVQPTTAAAFPPGFSISEIKNKQRRHLMFTRWKQQQRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVYDETIVDPNDEEVAYDEATDEFASYFNRQTCPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCISRDFTDLIVINEDRKIPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHTPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIFKSEKKVGIQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL", "length": 349, "header": "tr|A0A4X1UZQ8-1|A0A4X1UZQ8_PIG Isoform 1 of Ribosome production factor 1 OS=Sus scrofa OX=9823 GN=RPF1 PE=4 SV=1 CANONICAL=A0A4X1UZQ8-1" }, "locus": { "chromosome": "6", "start_pos": 129270976, "end_pos": 129256229, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032078.3", "url": "https://www.ensembl.org/id/ENSSSCT00000032078.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000025516.2", "url": "https://www.ensembl.org/id/ENSSSCP00000025516.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 43, "start_aa": "Thr", "end_pos": 43, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr43", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UZQ8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZQ8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100620426", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100620426", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZMJ4-1", "protein_name": "Ribosome production factor 1", "gene_name": "RPF1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGPEVRVFLPVAHAPSALPAERRGRGAAQRSMAGGGAGMGTDSGPGSGPGPGPAGQNVEPAAPERVLFPPTFSVSEIKNKQRRHFMFLRWKQQQRKEKLALKKKRRKEREALGDKAPPKAIPKTIENQRIYDETTVDPNDEEVAFDIATDEFAPYFNRQTVPKILITTSDRPRGRTVRFCEQLSTVIPNSHVYYRRGLALKRIIPQCIARDFTDLIVINEDRKIPNGLVLSHLPDGPTAHFRMSSVRLRKEIKRKGKEPTEHVPEVILNNFTTRLGHSIGRMFASLFPHDPQFIGRQVATFHNQRDYIFFRFHRYIFKSEKKVGIQELGPRFTLKLRSLQKGTFDSKFGEYEWIHKRREMDTSRRKFHL", "length": 369 }, "evidence": [ { "id": "A0A4X1UZQ8", "url": "https://omabrowser.org/oma/group/A0A4X1UZQ8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F6RR01-1", "protein_name": "Ribosome production factor 1", "gene_name": "RPF1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAKAGGKSGGSGKKGLKRKAATEESQEAAVGEDGTTESGVQPPKTAAFPPGFSISEIKNKQRRHLMFTRWKQQQRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVYDETIVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCISRDFTDLIVINEDRKIPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIFKSEKKVGIQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL", "length": 349 }, "evidence": [ { "id": "A0A4X1UZQ8", "url": "https://omabrowser.org/oma/group/A0A4X1UZQ8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P38805-1", "protein_name": "Ribosome production factor 1", "gene_name": "RPF1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MALGNEINITNKLKRQEIFADIKHEKNKERHTMRRKRAKEERENPELREQRLKENVTQTIENTRVYDETINKEVEGDEDDLMRYFNSNSNEPPKIFLTTNVNAKKSAYEFANILIEILPNVTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSFVEVKKIVGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQVITLHNQRDYIFFRRHRYVFKDNERVGLQELGPQFTLKLKRLQRGIKEETEWEHKPEMDKEKKKFYL", "length": 295 }, "evidence": [ { "id": "A0A4X1UZQ8", "url": "https://omabrowser.org/oma/group/A0A4X1UZQ8/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q54MN3-1", "protein_name": "Brix domain-containing protein", "gene_name": "bxdc5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVKPKKEVDKDDLTKEELKLRRSPTDIKCKAKRVLLVQKLQAAKKTAREKARKQRKKEREILGDAAPAKEVPRTIESMRRADETIVDTENDKEFEEEINKDEFESYFDGRVPKIVVTTNQRSTKEAVEFAQVFTKLLPNCEFFHRRKYHLKEIVQFCNNRDYTDIIVVNETKGIIDELTISHLPNGPTAVFRLTNLVMPEDIPGGGEMTSHKAELIVNNFTTRLGHSIGRMFASMFAQDPNFKGRRVCTLHNQRDFIFFRQHRYIFESKEDANVQELGPRFTLKLKSLQKGSFNTSTGEYIHLHQHNMDVDRKKFVL", "length": 317 }, "evidence": [ { "id": "A0A4X1UZQ8", "url": "https://omabrowser.org/oma/group/A0A4X1UZQ8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q5RJS9-1", "protein_name": "Ribosome production factor 1", "gene_name": "Rpf1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKAGEKSGGGGKRGLKRKAPAEEPQETAVASDGTAESGVQSAKAAAFPPGFSISEIKNKQRRHLMFTRWKQQQRKEKLAAKKKLKREREALGDKAPPKPVPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIFKSEKKVGIQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKVCAYCSKAI", "length": 345 }, "evidence": [ { "id": "A0A4X1UZQ8", "url": "https://omabrowser.org/oma/group/A0A4X1UZQ8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TND5-1", "protein_name": "Ribosome production factor 1", "gene_name": "Rpf1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKAGEKSVGGGKRGLKRKAAAEEPQEAAAASDGTAESGVQPAKAAAFPPGFSISEIKNKQRRHLMFTRWKQQQRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIFKSEKKVGIQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL", "length": 349 }, "evidence": [ { "id": "A0A4X1UZQ8", "url": "https://omabrowser.org/oma/group/A0A4X1UZQ8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H9Y2-1", "protein_name": "Ribosome production factor 1", "gene_name": "RPF1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAKAGDKSSSSGKKSLKRKAAAEELQEAAGAGDGATENGVQPPKAAAFPPGFSISEIKNKQRRHLMFTRWKQQQRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIFRSEKKVGIQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL", "length": 349 }, "evidence": [ { "id": "A0A4X1UZQ8", "url": "https://omabrowser.org/oma/group/A0A4X1UZQ8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9M125-1", "protein_name": "Ribosomal RNA processing Brix domain protein", "gene_name": "MEE49", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGFKRKKDDGDGEEMESDVRGKSTFSGGEKRNVILPSMIKNKDKRSKVYAKQKHEKKLEKQKKIRARDAAEKRALELGEEPPQKMIPKTIENTRESDETVCRPDDEELFADIDADEFNPVLRREIAPKVLLTTCRFNSTRGPALISELLSVIPNSHYQKRGTYDLKKIVEYATKKDFTSLIVVHTNRREPDALLIIGLPNGPTAHFKLSNLVLRKDIKNHGNPTSHQPELVLNNFTTRLGNRVGRFFQSLFPPDPNFRGRRVVTFHNQRDFIFFRHHRYIFETKESKSDKGKEETIKPRLQECGPRFTLKLVTLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL", "length": 343 }, "evidence": [ { "id": "A0A4X1UZQ8", "url": "https://omabrowser.org/oma/group/A0A4X1UZQ8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VKB4-1", "protein_name": "Probable ribosome production factor 1", "gene_name": "", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MIKIKRKTAPPPVEQDSDSDSSFDEEEPQDLEVQEGPVTDSSDEEAASSSKKTAKQGEASEDLKEEDDDDDEEENDDDDEEEDDDDDDDKKTRIPVLNPLSWMRNKEQRLALYKKMKKEKHKKKMQERRARRKAGVPANPGHTIESLREKDQTEVANLNDSDNEELQKELQLDDFSSYFERSYEPKVLITFADNPVTKTRKFGLELSRIFPNALVKIRNKSSVKKICKSAEREEFTDVVIVNEDRRKPNGLLVIHLPNGPTAHFKLSNVKLTSDIKRDHKEITKHRPEVILNNFTTRLGLTVGRMLGALFHHDPEFRGRRAVTFHNQRDYIFFRHHRYEFTKEGKRVKLRELGPRFTLKLRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL", "length": 394 }, "evidence": [ { "id": "A0A4X1UZQ8", "url": "https://omabrowser.org/oma/group/A0A4X1UZQ8/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UZQ8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZQ8" } ], "pmid": "" }, { "name": "preribosome, large subunit precursor", "id": "GO:0030687", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030687", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UZQ8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZQ8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "maturation of 5.8S rRNA", "id": "GO:0000460", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000460", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UZQ8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZQ8" } ], "pmid": "" }, { "name": "maturation of LSU-rRNA", "id": "GO:0000470", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000470", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UZQ8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZQ8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "rRNA primary transcript binding", "id": "GO:0042134", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042134", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UZQ8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZQ8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 250, "end_pos": 252, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1UZQ8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZQ8" }, { "id": "PS50833", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50833" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Brix", "eco_id": "ECO_0000259", "start_pos": 142, "end_pos": 325, "start_aa": "Pro", "end_aa": "Asp", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": 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"count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1UZU2-1", "uniprot_ac": "A0A4X1UZU2", "uniprot_id": "A0A4X1UZU2_PIG", "mass": { "chemical_mass": 63762.0, "monoisotopic_mass": 63762.0 }, "refseq": { "ac": "XP_020920258", "name": "Fanconi anemia group C protein isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920258" }, "gene_names": [ { "name": "FANCC", "type": "recommended", "evidence": [ { "id": "A0A4X1UZU2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZU2" } ] }, { "name": "FANCC", "type": "synonym", "evidence": [ { "id": "XP_020920258", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920258" } ] } ], "protein_names": [ { "name": "Fanconi anemia group C protein homolog", "type": "recommended", "evidence": [ { "id": "A0A4X1UZU2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZU2/entry#names_and_taxonomy" } ] }, { "name": "Fanconi anemia group C protein isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020920258", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920258" } ] }, { "name": "Protein FACC", "type": "synonym", "evidence": [ { "id": "A0A4X1UZU2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZU2/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "DNA repair protein that may operate in a postreplication repair or a cell cycle checkpoint function. May be implicated in interstrand DNA cross-link repair and in the maintenance of normal chromosome stability. Upon IFNG induction, may facilitate STAT1 activation by recruiting STAT1 to IFNGR1.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UZU2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZU2#function" }, { "database": "UniProtKB", "id": "PIRNR018417", "url": "https://www.uniprot.org/uniprotkb/PIRNR018417#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UZU2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZU2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "FANCC", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZU2", "locus": { "chromosome": "10", "start_pos": 27061801, "end_pos": 26796572, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000033654", "url": "https://www.ensembl.org/id/ENSSSCG00000033654" } ] } } ], "crossref": [ { "id": "102158362", "url": "https://www.ncbi.nlm.nih.gov/gene/102158362", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000686", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000686", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "RWHHRAS", "url": "https://omabrowser.org/oma/group/RWHHRAS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1UZU2", "url": "https://www.orthodb.org/?gene=A0A4X1UZU2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR16798", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16798", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16798:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16798:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02106", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02106", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6783310", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6783310", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9833482", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9833482", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020920258", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920258", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1UZU2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZU2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UZU2-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZU2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAQDLVALSSDYQFWMQKLSVWDQASTLETQQDTCLHLPQFQEFLRQMYEVLKEMDSSAITERFPTIGQLLAKVCRNPFILAYDESQKILIWCLCCLINKDPRNSGESKLNSWTRGLLSCILSTFRFDIKEVGLFTRGLGYAPTAYYPGLLKNMVLSLVSELRENHLNGFNTQRRMAPERITSLSRVCVPLVTLPEFEPLVEALLTYHGHEPQEVLCPEFFDAVNEAFLLKKISLPASAILCLWLRHLPSLENTMLHLFEKLVFSERNFLRRIECFMKDLLLPEAACHPAVFRVVDEMFRYALLETDGAPEVLAALQVFTRCFVEALEKENKQLRFAFKTYFPYASPSLVVTLLQHPKDIPRGLWSQPLRRISEMLQEIVEGQTHGSYGGPFESWFLFVHFGEWADIAAEQLLMVEAEAEAPEALLWLLAFSGSPGAGRRQRSQTMAEVKAVLGRLTKLLRSPTLSARDLQAAAGGGRGGDPSPPACGQLTRRLLLNFLLWAPGGRAIAREVITLIAQTDAITHEVIGFLDQTLYRWDHLCVEAPRPRELARELLTELRGQA", "length": 562, "header": "tr|A0A4X1UZU2-1|A0A4X1UZU2_PIG Isoform 1 of Fanconi anemia group C protein homolog OS=Sus scrofa OX=9823 GN=FANCC PE=4 SV=1 CANONICAL=A0A4X1UZU2-1" }, "isoforms": [ { "isoform_ac": "A0A4X1UZU2-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZU2/entry", "sequence": { "sequence": "MAQDLVALSSDYQFWMQKLSVWDQASTLETQQDTCLHLPQFQEFLRQMYEVLKEMDSSAITERFPTIGQLLAKVCRNPFILAYDESQKILIWCLCCLINKDPRNSGESKLNSWTRGLLSCILSTFRFDIKEVGLFTRGLGYAPTAYYPGLLKNMVLSLVSELRENHLNGFNTQRRMAPERITSLSRVCVPLVTLPEFEPLVEALLTYHGHEPQEVLCPEFFDAVNEAFLLKKISLPASAILCLWLRHLPSLENTMLHLFEKLVFSERNFLRRIECFMKDLLLPEAACHPAVFRVVDEMFRYALLETDGAPEVLAALQVFTRCFVEALEKENKQLRFAFKTYFPYASPSLVVTLLQHPKDIPRGLWSQPLRRISEMLQEIVEGQTHGSYGGPFESWFLFVHFGEWADIAAEQLLMVEAEAEAPEALLWLLAFSGSPGAGRRQRSQTMAEVKAVLGRLTKLLRSPTLSARDLQAAAGGGRGGDPSPPACGQLTRRLLLNFLLWAPGGRAIAREVITLIAQTDAITHEVIGFLDQTLYRWDHLCVEAPRPRELARELLTELRGQA", "length": 562, "header": "tr|A0A4X1UZU2-1|A0A4X1UZU2_PIG Isoform 1 of Fanconi anemia group C protein homolog OS=Sus scrofa OX=9823 GN=FANCC PE=4 SV=1 CANONICAL=A0A4X1UZU2-1" }, "locus": { "chromosome": "10", "start_pos": 27054754, "end_pos": 26879690, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045875.3", "url": "https://www.ensembl.org/id/ENSSSCT00000045875.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057452.3", "url": "https://www.ensembl.org/id/ENSSSCP00000057452.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UZU2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZU2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-6783310", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6783310", "resource": "Reactome", "description": "Fanconi Anemia Pathway" }, { "id": "R-SSC-9833482", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9833482", "resource": "Reactome", "description": "PKR-mediated signaling" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Y574-1", "protein_name": "Fanconi anemia group C protein homolog", "gene_name": "FANCC", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MHCGMAQDTTVPKLNFKFWLDKAIEWGQATTLESQKDVCLHLPQLQEFLHQTYETLKHMNSIAAIQQFPLIGQLLGRLCWNPFVVGYDESQKTLMWCLCCLYSSEPQNPVELKANSWIRSLLCHLLSSSKWERIEAETSTFISALGYTSADYYCHLVENIVSSLVTELRENQFNELNIQERISVSRVNAVSLFCLPLITLPDLTPLLETLLLYHGGASKEILSSEFLEAVNDAVLKKKISLSESAIFSLWHRHLPSLESATLSLLDQLTSLQINSLEKVACVIKDSLLPQAASHPAIFRIVNEIFKNALLETDGAPEVMTIIQVFIQLFIQVQQNENKQHKFPLKAYFPHHHQPLVIALLRRPFELPSTHWLQHLKHISDTLKSIVEDTNVSSFADLYEIWFLVACFGEWLDIAAEQLMKAAVAPDALLWLLAFYYCPQNENQQRTQTMVESQAVYSRLMMLYNRTVLSFGDLQASVNNAADTEQCHTQCLITHLLTNFLLFSSGGHMIAQEFISHITETTDMSKEVCSLLIRTAYRIKHNGGENQRTVKLLNELLQKLAVEV", "length": 563 }, "evidence": [ { "id": "A0A4X1UZU2", "url": "https://omabrowser.org/oma/group/A0A4X1UZU2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "B0V1A9-1", "protein_name": "Fanconi anemia group C protein isoform X1", "gene_name": "fancc", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAGVSETNVQFWMNKAVNWGEASSCSALLDTSRHLGPLRNFLQQILQGLQQMNSTSEAMKTFPFVGQFLGRLCWNSCVTADERSQKLLLRCLSCLYSAEPLNAVERKANMWIKNMLCHLISEEEGSVAHATVKHAGSTPMRYHTEALQKVVSLMVEEVSKSCDCLPNASARCSNSNIHTMSTACIALVTCTQMAPLIGALLKHSESCGSSCLNQEFINEVGEAFISKRLVLEDEAVISLWCQSALSLEGAAVSLLESVLSDHQLTTQSLDKHVNDSLLPQASARHCHIFLTVSEIYRNVLTEIDENLAIRTLIQVFTVCFLQRLTGQNSQDRLPLRAFFPNVMPSLLSPLLTAPSEVPREAWLDHLSWITSLLQSVTENEEEDVRAYQPMFEAWFLLVRCGYWVDTAVELLVLAASGNTEALLWLLTFFHHPTNRGHQRSQQTAVAREAWTHLRMLFLNHPPPPRHLSAVKELLSSSSISANLVLHLFSNFAVFSHGPVSIITEISDKVLTETAVRRRALWILASIRCRLNSASSRDDRVHSRLRTLQDTLLQT", "length": 554 }, "evidence": [ { "id": "A0A4X1UZU2", "url": "https://omabrowser.org/oma/group/A0A4X1UZU2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "O35870-1", "protein_name": "Fanconi anemia group C protein homolog", "gene_name": "Fancc", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQEPADLASDYQFWLQKLSAWEQASSKETQRDTCLHLSRFQEFLRQMYELLKEMDSDAILERFPSIGQLLAKTCWNPLILAYDESQKIVIWCLCCLMNKAPRTSAESGRNSWIQGLLSHVLSAFRFDMKEVCLFTKSLGYESIDYYPSLLKNMVLSLVSELRGSHLNGLNTQSRMAPERMMSLSQVCVPLVTLPDIEPLVEALLTYHGHEPQEVLSAEFFEAVTEAFLSEKVVLPTSSVVSLWFRHLPSLEKATLHLFEKLFSSKRNCLRRMECCIKESLLPQAACQPAIFRIVDEMFRFVLLETDGAPAVLAALQIFTSCLVEALRKENKQLKFALKTYFPYSAPCLTAALSQQPEAIPQGHRLQPLLHISQLLREAVEDCTDGSHRNPFESWFLFVHFGGWVDLAVEELLLREEAEPPAGLLWLLVFYYSPQDRSQQREQSMVELKVLVNRLLKLLRSGPLSAMDLLEAAESPREDPRPVCGQLVRRLLLSLLFWTPEGHAIVWEAVTHMAHTDAVTHEIVGFLDQTLYRSHHLCVEASRKLARELLKDLQAQV", "length": 557 }, "evidence": [ { "id": "A0A4X1UZU2", "url": "https://omabrowser.org/oma/group/A0A4X1UZU2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P50652-1", "protein_name": "Fanconi anemia group C protein homolog", "gene_name": "Fancc", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAQESADLASDCQSWLQKLSAWEQASSEETQKDTCLHLSGFQEFLRQMYEILKEMDSDAILERFPTIGQLLAKACWNPLILAYDESQKIVIWCLCCLMNKEPRTSAESGLNSWIRGLLSHVLSAFRFDMKEVCLFTKSLGYESIDYYPSLLKNMVLSLVSELRESHLNGLSTQSRMAPERMMSLSEVCVPLVTLPDMEPLVEALLTYHGHEPQEVLAPEFFEAVNEAFLSEKIVLPTSSVVSLWFRHLPSLEKATLHLFEKLFSSKIICLRRMECCIRESFLPQAACQPAIFRIVDEMFRFVLLETDGAPEVLAALQVFTSCLVEALKKENKQLTFALRTYFPYGAPCLAAALSQHPEAIPQGHRLQPLLHISQLLREAVEDCTRGSPRNPFESWFLFVHFGGWVDLAVAELLLREEAEPPAGLLWLLVFYYSPQDGSQQREQSMVELKVLINRLLMLLRSGPLSATDLQEAAESPSGDPRPPVCGQLVRRLLLSLLLWTPEGHAIVWEAVTHGPTFEITGPGCCPRIWRSTRPQHRPRAHLCCTEMAHTDAVIHEIIGFLDQTLYRSQHLCVEASRKLARDLLKELQAQV", "length": 591 }, "evidence": [ { "id": "A0A4X1UZU2", "url": "https://omabrowser.org/oma/group/A0A4X1UZU2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q00597-1", "protein_name": "Fanconi anemia group C protein", "gene_name": "FANCC", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAQDSVDLSCDYQFWMQKLSVWDQASTLETQQDTCLHVAQFQEFLRKMYEALKEMDSNTVIERFPTIGQLLAKACWNPFILAYDESQKILIWCLCCLINKEPQNSGQSKLNSWIQGVLSHILSALRFDKEVALFTQGLGYAPIDYYPGLLKNMVLSLASELRENHLNGFNTQRRMAPERVASLSRVCVPLITLTDVDPLVEALLICHGREPQEILQPEFFEAVNEAILLKKISLPMSAVVCLWLRHLPSLEKAMLHLFEKLISSERNCLRRIECFIKDSSLPQAACHPAIFRVVDEMFRCALLETDGALEIIATIQVFTQCFVEALEKASKQLRFALKTYFPYTSPSLAMVLLQDPQDIPRGHWLQTLKHISELLREAVEDQTHGSCGGPFESWFLFIHFGGWAEMVAEQLLMSAAEPPTALLWLLAFYYGPRDGRQQRAQTMVQVKAVLGHLLAMSRSSSLSAQDLQTVAGQGTDTDLRAPAQQLIRHLLLNFLLWAPGGHTIAWDVITLMAHTAEITHEIIGFLDQTLYRWNRLGIESPRSEKLARELLKELRTQV", "length": 558 }, "evidence": [ { "id": "A0A4X1UZU2", "url": "https://omabrowser.org/oma/group/A0A4X1UZU2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "Fanconi anaemia nuclear complex", "id": "GO:0043240", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043240", "evidence": [ { "database": "UniProtKB", 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"field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1V118-1", "uniprot_ac": "A0A4X1V118", "uniprot_id": "A0A4X1V118_PIG", "mass": { "chemical_mass": 43719.0, "monoisotopic_mass": 43719.0 }, "refseq": { "ac": "NP_001231243", "name": "PHD finger protein 23", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231243" }, "gene_names": [ { "name": "PHF23", "type": "recommended", "evidence": [ { "id": "A0A4X1V118", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V118" } ] }, { "name": "PHF23", "type": "synonym", "evidence": [ { "id": "NP_001231243", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231243" } ] } ], "protein_names": [ { "name": "PHD finger protein 23", "type": "synonym", "evidence": [ { "id": "NP_001231243", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231243" }, { "id": "A0A4X1V118", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V118/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V118", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V118" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PHF23", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V118", "locus": { "chromosome": "12", "start_pos": 52590804, "end_pos": 52595266, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000017937", "url": "https://www.ensembl.org/id/ENSSSCG00000017937" } ] } } ], "crossref": [ { "id": "A0A4X1V118", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1V118", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000017937", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000017937", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd15631", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd15631", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100625554", "url": "https://www.ncbi.nlm.nih.gov/gene/100625554", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001965", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001965", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011011", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011011", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019787", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019787", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100625554", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625554", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CRDMRRS", "url": "https://omabrowser.org/oma/group/CRDMRRS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1V118", "url": "https://www.orthodb.org/?gene=A0A4X1V118", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14571", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14571", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14571:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14571:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13831", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13831", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001231243", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231243", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1V043", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V043", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1V043-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V043-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1V118", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V118", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1V118-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V118-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SFU1", "url": "https://www.uniprot.org/uniprotkb/F1SFU1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SFU1-1", "url": "https://www.uniprot.org/uniprotkb/F1SFU1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLEAMAEPSPEDPPPTLKPETQPPEKRRRTIEDFNKFCSFVLAYAGYIPPSKEESDWPASGSSSPLRGESAADSDGWDSAPSDLRTIQTFVKKAKSSKRRAAQAGPTQTGPPRSAFPRLQAPDSATLLEKMKLKDSLFDLDGPKMASPLSPTSLTHAPRPPAALTPVPLSQGDLSQPSRKKDRKNRKLGPGGGAGFGVLRRPRPAPGDGEKRSRIKKSKKRKLKKAERGDRLPPPGPPRAPPSDTDSEEEEEEEEEEEEEEMGAMVVGEAPAPVLPAPPEAPRPPAPVHPEGAPPADSESKEVGSTETSQDGDASSSEGEMRVMDEDIMVESGDDSWDLITCYCRKPFAGRPMIECSLCGTWIHLSCAKIKKTNVPDFFYCQKCKELRPEARRLGGPPKSGEP", "length": 403, "header": "tr|A0A4X1V118-1|A0A4X1V118_PIG Isoform 1 of PHD finger protein 23 OS=Sus scrofa OX=9823 GN=PHF23 PE=3 SV=1 CANONICAL=A0A4X1V118-1" }, "isoforms": [ { "isoform_ac": "A0A4X1V043-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V043/entry", "sequence": { "sequence": "MLEAMAEPSPEDPPPTLKPETQPPEKRRRTIEDFNKFCSFVLAYAGYIPPSKEESDWPASGSSSPLRGESAADSDGWDSAPSDLRTIQTFVKKAKSSKRRAAQAGPTQTGPPRSAFPRLQAPDSATLLEKMKLKDSLFDLDGPKMASPLPSPCAASTS", "length": 158, "header": "tr|A0A4X1V043-1|A0A4X1V043_PIG Computationally mapped isoform of PHD finger protein 23 OS=Sus scrofa OX=9823 GN=PHF23 PE=4 SV=1 CANONICAL=A0A4X1V118-1" }, "locus": { "chromosome": "12", "start_pos": 52595032, "end_pos": 52591861, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068971.2", "url": "https://www.ensembl.org/id/ENSSSCT00000068971.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065697.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065697.1" } ] } }, { "isoform_ac": "A0A4X1V118-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V118/entry", "sequence": { "sequence": "MLEAMAEPSPEDPPPTLKPETQPPEKRRRTIEDFNKFCSFVLAYAGYIPPSKEESDWPASGSSSPLRGESAADSDGWDSAPSDLRTIQTFVKKAKSSKRRAAQAGPTQTGPPRSAFPRLQAPDSATLLEKMKLKDSLFDLDGPKMASPLSPTSLTHAPRPPAALTPVPLSQGDLSQPSRKKDRKNRKLGPGGGAGFGVLRRPRPAPGDGEKRSRIKKSKKRKLKKAERGDRLPPPGPPRAPPSDTDSEEEEEEEEEEEEEEMGAMVVGEAPAPVLPAPPEAPRPPAPVHPEGAPPADSESKEVGSTETSQDGDASSSEGEMRVMDEDIMVESGDDSWDLITCYCRKPFAGRPMIECSLCGTWIHLSCAKIKKTNVPDFFYCQKCKELRPEARRLGGPPKSGEP", "length": 403, "header": "tr|A0A4X1V118-1|A0A4X1V118_PIG Isoform 1 of PHD finger protein 23 OS=Sus scrofa OX=9823 GN=PHF23 PE=3 SV=1 CANONICAL=A0A4X1V118-1" }, "locus": { "chromosome": "12", "start_pos": 52595032, "end_pos": 52591386, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027039.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027039.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020412.2", "url": "https://www.ensembl.org/id/ENSSSCP00000020412.2" } ] } }, { "isoform_ac": "F1SFU1-1", "url": "https://www.uniprot.org/uniprotkb/F1SFU1/entry", "sequence": { "sequence": "PVDCWWDPPPTLKPETQPPEKRRRTIEDFNKFCSFVLAYAGYIPPSKEESDWPASGSSSPLRGESAADSDGWDSAPSDLRTIQTFVKKAKSSKRRAAQAGPTQTGPPRSAFPRLQAPDSATLLEKMKLKDSLFDLDGPKMASPLSPTSLTHAPRPPAALTPVPLSQGDLSQPSRKKDRKNRKLGPGGGAGFGVLRRPRPAPGDGEKRSRIKKSKKRKLKKAERGDRLPPPGPPRAPPSDTDSEEEEEEEEEEEEEEMGAMVVGEAPAPVLPAPPEAPRPPAPVHPEGAPPADSESKEVGSTETSQDGDASSSEGEMRVMDEDIMVESGDDSWDLITCYCRKPFAGRPMIECSLCGTWIHLSCAKIKKTNVPDFFYCQKCKELRPEARRLGGPPKSGEP", "length": 398, "header": "tr|F1SFU1-1|A0A4X1V118_PIG Computationally mapped isoform of PHD finger protein 23 OS=Sus scrofa OX=9823 GN=PHF23 PE=3 SV=3 CANONICAL=A0A4X1V118-1" }, "locus": { "chromosome": "12", "start_pos": 52594547, "end_pos": 52591386, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000019521.5", "url": "https://www.ensembl.org/id/ENSSSCT00000019521.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019003.4", "url": "https://www.ensembl.org/id/ENSSSCP00000019003.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SFU1", "url": "https://www.uniprot.org/uniprotkb/F1SFU1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100625554", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625554", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A5D962-1", "protein_name": "PHD finger protein 23", "gene_name": "PHF23", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLEAMAEPSPEDPPPTLKPETQPPEKRRRTIEDFNKFCSFVLAYAGYIPPSKEESDWPASGSSSPLRGESAADSDGWDSAPSDLRTIQTFVKKAKSSKRRAAQAGPTQPGPPRSTFPRLQAPDSATLLEKMKLKDSLFDIDGPKMASPLSPTSLTHASRPPAALTPVPLSQGDLSQPPRKKDRKNRKLGPGGATGFGVLRRPRPAPGDGEKRSRIKKSKKRKLKKAERGDRLPPPGPPRAPPSDTDSEEEEEEEEEEEEMAAMVGGEAPAPVLPTPEAPRPPATVHPEGAPPTDGESKEVGSTETSQDGDASSSEGEMRVMDEDIMVESGDDSWDLITCYCRKPFAGRPMIECSLCGTWIHLSCAKIKKTNVPDFFYCQKCKELRPEARRLGGPPKSGEP", "length": 400 }, "evidence": [ { "id": "A0A4X1V118", "url": "https://omabrowser.org/oma/group/A0A4X1V118/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q6AY75-1", "protein_name": "PHD finger protein 23", "gene_name": "Phf23", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLEAMAEPSPEDPPPTLKPETQPPEKRRRTIEDFNKFCSFVLAYAGYIPPSKGAPDSATLLEKMKLKDSLFDLDGPKVASPLSPTSLTSRPPAALTPVPLSQGDLSQPRKKDRKNRKLGPGGGAGFGVLRRPRPAPGDGEKRSRIKKSKKRKLKKADRGDRLPPPGPPRAPPSDTDSEEEEEEEEEEDDEEETTVVGGGGVPAPVLPTPPEAPRPPVTVHPEGAPPTDSEGKDAGSTETSQDGDGSSSEGEMRVMDEDIMVESGDDSWDLITCYCRKPFAGRPMIECSLCGTWIHLSCAKIKKTNVPDFFYCQKCKELRPEARRLGGLPKSGEP", "length": 334 }, "evidence": [ { "id": "A0A4X1V118", "url": "https://omabrowser.org/oma/group/A0A4X1V118/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8BSN5-1", "protein_name": "PHD finger protein 23", "gene_name": "Phf23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLEAMAEPSPEDPPPTLKPETQPPEKRRRTIEDFNKFCSFVLAYAGYIPPSKEESDWPASGSSSPLRGESAADSDGWDSAPSDLRTIQTFVKKAKSSKRRAVQSGPTQPGPPRSTFSRLQAPDSATLLEKMKLKDSLFDLDGPKVASPLSPTSLTHTSRPPAALAPVPLSQGDLSQPRKKDRKNRKLGPGGGAGFGVLRRPRPAPGDGEKRSRIKKSKKRKLKKADRGDRLPPPGPPRAPPSDTDSEEEEEEEEEEDDEEEMTVGGGVPAPVLPTPPEAPRPPVTVHSEGAPPTDSEGKDVGSTETSQDGDASSSEGEMRVMDEDIMVESGDDSWDLITCYCRKPFAGRPMIECSLCGTWIHLSCAKIKKTNVPDFFYCQKCKELRPEARRLGGLPKSGEP", "length": 401 }, "evidence": [ { "id": "A0A4X1V118", "url": "https://omabrowser.org/oma/group/A0A4X1V118/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BUL5-1", "protein_name": "PHD finger protein 23", "gene_name": "PHF23", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLEAMAEPSPEDPPPTLKPETQPPEKRRRTIEDFNKFCSFVLAYAGYIPPSKEESDWPASGSSSPLRGESAADSDGWDSAPSDLRTIQTFVKKAKSSKRRAAQAGPTQPGPPRSTFSRLQAPDSATLLEKMKLKDSLFDLDGPKVASPLSPTSLTHTSRPPAALTPVPLSQGDLSHPPRKKDRKNRKLGPGAGAGFGVLRRPRPTPGDGEKRSRIKKSKKRKLKKAERGDRLPPPGPPQAPPSDTDSEEEEEEEEEEEEEEMATVVGGEAPVPVLPTPPEAPRPPATVHPEGVPPADSESKEVGSTETSQDGDASSSEGEMRVMDEDIMVESGDDSWDLITCYCRKPFAGRPMIECSLCGTWIHLSCAKIKKTNVPDFFYCQKCKELRPEARRLGGPPKSGEP", "length": 403 }, "evidence": [ { "id": "A0A4X1V118", "url": "https://omabrowser.org/oma/group/A0A4X1V118/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V118", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V118" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": 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regulation of autophagosome assembly", "id": "GO:1902902", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902902", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V118", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V118" } ], "pmid": "" }, { "name": "autophagy", "id": "GO:0006914", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006914", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V118", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V118" } ], "pmid": "" }, { "name": "positive regulation of protein ubiquitination", "id": "GO:0031398", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031398", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V118", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V118" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V118", "url": 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10812:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03299", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03299", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8866904", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8866904", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8866907", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8866907", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003356687", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003356687", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1V0Q4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0Q4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1V0Q4-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0Q4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSTTFPGLVHDAEIRHDGSNSYRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASPYFSTNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQIHHGEPTDFINLHNARALKSSCLDEQRRELGCLDAYRRHDLSLMSHGSQYGMHPDQRLLPGPSLGLAAAGADDLQGSVEAQCGLVLNGQGGVIRRGGTCVVNPTDLFCSVPGRLSLLSSTSKYKVTIAEVKRRLSPPECLNASLLGGILRRAKSKNGGRCLREKLDRLGLNLPAGRRKAANVTLLTSLVEGEALHLARDFGYTCETEFPAKAVGEHLARQHMEQKEQTARKKMILATKQICKEFQDLLSQDRSPLGSSRPTPILDLDIQRHLTHFSLITHGFGTPAICAALSTFQTVLSEMLNYLEKHTTHKNGGAADSGQGHGTSEKAPLRKTSEAAVKEGKTEKTD", "length": 452, "header": "tr|A0A4X1V0Q4-1|A0A4X1V0Q4_PIG Isoform 1 of Transcription factor AP-2 delta OS=Sus scrofa OX=9823 GN=TFAP2D PE=3 SV=1 CANONICAL=A0A4X1V0Q4-1" }, "isoforms": [ { "isoform_ac": "A0A4X1V0Q4-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0Q4/entry", "sequence": { "sequence": 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"glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V0Q4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0Q4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100155785", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100155785", "resource": "KEGG Pathway" }, { "id": "R-SSC-8866904", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8866904", "resource": "Reactome", "description": "Negative regulation of activity of TFAP2 (AP-2) family transcription factors" }, { "id": "R-SSC-8866907", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8866907", "resource": "Reactome", "description": "Activation of the TFAP2 (AP-2) family of transcription factors" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I5ZJN7-1", "protein_name": "Transcription factor AP-2 delta", "gene_name": "Tfap2d", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSTTFPGLVHDAEIRHDGSNSYRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASPYFSTNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQIHHGEPTDFINLHNARALKSSCLDEQRRELGCLDAYRRHDLSLMSHGSQYGMHPDQRLLPGPSLGLAAAGADDLQGSVEAQCGIVLNGQGGVIRRGGTCVVNPTDLFCSVPGRLSLLSSTSKYKVTIAEVKRRLSPPECLNASLLGGILRRAKSKNGGRCLREKLDRLGLNLPAGRRKAANVTLLTSLVEGEALHLARDFGYTCETEFPAKAVGEHLARQHMEQKEQTARKKMILATKQICKEFQDLLSQDRSPLGSSRPTPILDLDIQRHLTHFSLITHGFGTPAICAALSTFQTVLSEMLNYLEKHTTHKNGGAADSGQGHANSEKAPLRKASEAAVKEGKTEKTD", "length": 452 }, "evidence": [ { "id": "A0A4X1V0Q4", "url": "https://omabrowser.org/oma/group/A0A4X1V0Q4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A9J7HFB1-1", "protein_name": "Transcription factor AP-2-delta isoform X1", "gene_name": "Tfap2d", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": 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"MSTTFPGLVHDAEIRHDGSNSYRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASPYFSTNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQIHHGEPTDFINLHNARALKSSCLDEQRRELGCLDAYRRHDLSLMSHGSQYGMHPDQRLLPGPSLGLAAAGADDLQGSVEAQCGLVLNGQGGVIRRGGTCVVNPTDLFCSVPGRLSLLSSTSKYKVTIAEVKRRLSPPECLNASLLGGILRRAKSKNGGRCLREKLDRLGLNLPAGRRKAANVTLLTSLVEGEALHLARDFGYTCETEFPAKAVGEHLARQHMEQKEQTARKKMILATKQICKEFQDLLSQDRSPLGSSRPTPILDLDIQRHLTHFSLITHGFGTPAICAALSTFQTVLSEMLNYLEKHTTHKNGGAADSGQGHGTSEKAPLRKTSEAAVKEGKTEKTD", "length": 452 }, "evidence": [ { "id": "A0A4X1V0Q4", "url": "https://omabrowser.org/oma/group/A0A4X1V0Q4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1C135-1", "protein_name": "Transcription factor AP-2 delta", "gene_name": "TFAP2D", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSTTFPGLVHDAEIRHDGSNSYRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASPYFSTNHQYTPLHHQSFHYEFQHSHPAVNPDAYSLNSLHHSQQYYQQIHHGEPTDFINLHNARALKSSCLDEQRRELGCLDAYRRHDLSLMSHGSQYGMHPDQRLLPGPSLGLAASGADDLQSSVEAQCGLVLNGQGGVIRRGGTCVVNPTDLFCSVPGRLSLLSSTSKYKVTIAEVKRRLSPPECLNASLLGGILRRAKSKNGGRCLREKLDRLGLNLPAGRRKAANVTLLTSLVEGEALHLARDFGYTCETEFPAKAVGEHIARQHMEQKEQTARKKMILATKQICKEFQDLLSQDRSPLGSSRPTPILDLDIQRHLTHFSLITHGFGTPAICAALSTFQTVLSEMLNYLEKHTSHKNGGAAESGQGHANSEKAPLRKTSEAAVKEGKTEKTD", "length": 452 }, "evidence": [ { "id": "A0A4X1V0Q4", "url": "https://omabrowser.org/oma/group/A0A4X1V0Q4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q5RJ20-1", "protein_name": "Transcription factor AP-2-delta", "gene_name": "tfap2d", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": 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"UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LAK1", "url": "https://www.uniprot.org/uniprotkb/I3LAK1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LAK1-1", "url": "https://www.uniprot.org/uniprotkb/I3LAK1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MALAKVPGTCLLTIRVLQAHGLPSKDLVSPSDCYVTLWLPTASSHQLQTRMVKNSRNPIWNQSFHFRIHSQLKNVVQLKVFDQDFLTKDDPMLSVLFDVGTLRAGESRRESFSLNPQGEERLEVEFRLQSLTDCEQLVSNGILVARELSCLHVRLEKAGDQKESEGRVQLVVPGSCEGPQEASVGTGPWHFHWPACWEQELRIHLQDAPQEQLKVPLRALPSGQVVRLVFPTSQEPMMRVELENKEGPRELAVRLGCKPCAEEQAFLSRRKQVVAKALKQALQLDGDLQEDEIPVIAVMATGGGTRAMTSLYGQLAGLKELGLLDCISYITGASGATWALANLYEDPEWSQKDLVGPIESLKTQVTKSKLGVLAPSQLWRYRQELAERARLGYPTCFTDLWALVSEALLHDQPHDHKLSDQREALSHGQNPLPIYCALNTKEKGLTTFEFGEWCEFSPYEIGFPKYGAFIPSELFGSQFFMGRLTKQLPESRICFLEGIWSNLYTANLQDSLYWSSEPSQFWDRWAQDQISLDKDQVPLLKVEEPPTVAGRIAEFFTDLLTWRPLAQTTHNFLRGLSFHKDYYQHPHFSAWKATKLDGFPNQLTPAEPHLCLLDVGYLINTSCPPLLRPTRDVDLILSLDYNLHGAFQQLQLLGQFCQEQGIPFPPISPSPEEQCQPQECHLFLDPACPDAPAVLHFPLVNASFREHSAPGVRRTAEEQEAGQVNLSSSDSPYHFSKVTYSQEDTDKLLRLTQYNICNNRERLLEALREAVQRRRQRRPE", "length": 780, "header": "tr|A0A4X1V0R9-1|A0A4X1V0R9_PIG Isoform 1 of Phospholipase A2 OS=Sus scrofa OX=9823 GN=PLA2G4B PE=4 SV=1 CANONICAL=A0A4X1V0R9-1" }, "isoforms": [ { "isoform_ac": "A0A4X1V0R9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0R9/entry", "sequence": { "sequence": "MALAKVPGTCLLTIRVLQAHGLPSKDLVSPSDCYVTLWLPTASSHQLQTRMVKNSRNPIWNQSFHFRIHSQLKNVVQLKVFDQDFLTKDDPMLSVLFDVGTLRAGESRRESFSLNPQGEERLEVEFRLQSLTDCEQLVSNGILVARELSCLHVRLEKAGDQKESEGRVQLVVPGSCEGPQEASVGTGPWHFHWPACWEQELRIHLQDAPQEQLKVPLRALPSGQVVRLVFPTSQEPMMRVELENKEGPRELAVRLGCKPCAEEQAFLSRRKQVVAKALKQALQLDGDLQEDEIPVIAVMATGGGTRAMTSLYGQLAGLKELGLLDCISYITGASGATWALANLYEDPEWSQKDLVGPIESLKTQVTKSKLGVLAPSQLWRYRQELAERARLGYPTCFTDLWALVSEALLHDQPHDHKLSDQREALSHGQNPLPIYCALNTKEKGLTTFEFGEWCEFSPYEIGFPKYGAFIPSELFGSQFFMGRLTKQLPESRICFLEGIWSNLYTANLQDSLYWSSEPSQFWDRWAQDQISLDKDQVPLLKVEEPPTVAGRIAEFFTDLLTWRPLAQTTHNFLRGLSFHKDYYQHPHFSAWKATKLDGFPNQLTPAEPHLCLLDVGYLINTSCPPLLRPTRDVDLILSLDYNLHGAFQQLQLLGQFCQEQGIPFPPISPSPEEQCQPQECHLFLDPACPDAPAVLHFPLVNASFREHSAPGVRRTAEEQEAGQVNLSSSDSPYHFSKVTYSQEDTDKLLRLTQYNICNNRERLLEALREAVQRRRQRRPE", "length": 780, "header": "tr|A0A4X1V0R9-1|A0A4X1V0R9_PIG Isoform 1 of Phospholipase A2 OS=Sus scrofa OX=9823 GN=PLA2G4B PE=4 SV=1 CANONICAL=A0A4X1V0R9-1" }, "locus": { "chromosome": "1", "start_pos": 129524271, "end_pos": 129514848, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005233.4", "url": "https://www.ensembl.org/id/ENSSSCT00000005233.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005107.2", "url": "https://www.ensembl.org/id/ENSSSCP00000005107.2" } ] } }, { "isoform_ac": "I3LAK1-1", "url": "https://www.uniprot.org/uniprotkb/I3LAK1/entry", "sequence": { "sequence": "MVKNSRNPIWNQSFHFRIHSQLKNVVQLKVFDQDFLTKDDPMLSVLFDVGTLRAGESRRESFSLNPQGEERLEVEFRLQSLTDCEQLVSNGILVARELSCLHVRLEKAGDQKESEGRVQLVVPGSCEGPQEASVGTGPWHFHWPACWEQELRIHLQDAPQEQLKVPLRALPSGQVVRLVFPTSQEPMMRVELENKEGPRELAVRLGCKPCAEEQAFLSRRKQVVAKALKQALQLDGDLQEDEIPVIAVMATGGGTRAMTSLYGQLAGLKELGLLDCISYITGASGATWALANLYEDPEWSQKDLVGPIESLKTQVTKSKLGVLAPSQLWRYRQELAERARLGYPTCFTDLWALVSEALLHDQPHDHKLSDQREALSHGQNPLPIYCALNTKEKGLTTFEFGEWCEFSPYEIGFPKYGAFIPSELFGSQFFMGRLTKQLPESRICFLEGIWSNLYTANLQDSLYWSSEPSQFWDRWAQDQISLDKDQVPLLKVEEPPTVAGRIAEFFTDLLTWRPLAQTTHNFLRGLSFHKDYYQHPHFSAWKATKLDGFPNQLTPAEPHLCLLDVGYLINTSCPPLLRPTRDVDLILSLDYNLHGAFQQLQLLGQFCQEQGIPFPPISPSPEEQCQPQECHLFLDPACPDAPAVLHFPLVNASFREHSAPGVRRTAEEQEAGQVNLSSSDSPYHFSKVTYSQEDTDKLLRLTQYNICNNRERLLEALREAVQRRRQRRPE", "length": 730, "header": "tr|I3LAK1-1|A0A4X1V0R9_PIG Computationally mapped isoform of Phospholipase A2 OS=Sus scrofa OX=9823 GN=PLA2G4B PE=4 SV=2 CANONICAL=A0A4X1V0R9-1" }, "locus": { "chromosome": "1", "start_pos": 129522654, "end_pos": 129514848, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028869.4", "url": "https://www.ensembl.org/id/ENSSSCT00000028869.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021069.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021069.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LAK1", "url": "https://www.uniprot.org/uniprotkb/I3LAK1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152927", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152927", "resource": "KEGG Pathway" }, { "id": "R-SSC-1482788", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1482788", "resource": "Reactome", "description": "Acyl chain remodelling of PC" }, { "id": "R-SSC-1482801", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1482801", "resource": "Reactome", "description": "Acyl chain remodelling of PS" }, { "id": "R-SSC-1482839", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1482839", "resource": "Reactome", "description": "Acyl chain remodelling of PE" }, { "id": "R-SSC-1482925", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1482925", "resource": "Reactome", "description": "Acyl chain remodelling of PG" }, { "id": "R-SSC-1483115", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1483115", "resource": "Reactome", "description": "Hydrolysis of LPC" }, { "id": "R-SSC-1483166", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1483166", "resource": "Reactome", "description": "Synthesis of PA" } ], "orthologs": [ { "uniprot_canonical_ac": "D4A1I6-1", "protein_name": "Phospholipase A2", "gene_name": "Pla2g4b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALQTCPVYMQAKVPETHLLTVRVLQASGLPSKDLVTSSDCYVTLNLPTASSGTLQTRTVKNSRNPVWNQNFHFRIHRQLKNVMELKVFDQDLMTKDDPVLSVLFDVGTLQVGTQRQSFSLSAQEDGRLEVEFRLQTLTDCEEQLISNGILVAQELSCLHVELKRTGDPKRSERKVQLVVAAACEGPQEAPVGTGSFRFHYPACWEQELSVHLQDDPHEQLKVPLRTLPSSQLVRLVFPTSQEPLMRLELKKEDGPKELAVRLGCGPCPEEQAFLSKRKQVVAAALKKALQLDQDLQEDEIPVIAVMATGGGIRAMTSLYGQLAGLKELGLLDCISYITGASGSTWALANLYEDPEWSQKDLAGPTEMLKTQVTKSKLGALAPSQLWRYRQELAERARLGYPTCFTNLWALINEALLHDKPHEHKLSDQREALSRGQNPLPIYCALNSKEKGLSTFEFGEWCEFSPYEVGFPKYGAFIPSELFGSEFFMGRLVKQLPESRICFLEGIWSNLFAASLQDSFYWSSEPSQFWDRWAQDQANLDKEQVSHLKIAEPPTAAGKIAELFTDLLTKRPLAQATHNFMRGLHFHKDYFHHPHFSTWKASKLDKFPNQLTPAEPHLCLLDVGYFINTSCPPLLQPTRDVDLILSLDYNLSGAFQQLQLVSRFCQEQGIPFPSISPSPEEQRQPQECHMFCDPAQPEAPAVLHFPLVNDSFRDHSAPGVPRTSEEKTAGEVNLSSSNSPYDYTKVTYSQEDVDKLLRLTHYNICNNQDRLREAMHQAVQRRRNRRQFRRE", "length": 791 }, "evidence": [ { "id": "A0A4X1V0R9", "url": "https://omabrowser.org/oma/group/A0A4X1V0R9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C869-1", "protein_name": "Cytosolic phospholipase A2 beta", "gene_name": "PLA2G4B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAVAEVSRTCLLTVRVLQAHRLPSKDLVTPSDCYVTLWLPTACSHRLQTRTVKNSSSPVWNQSFHFRIHRQLKNVMELKVFDQDLVTGDDPVLSVLFDAGTLRAGEFRRESFSLSPQGEGRLEVEFRLQSLADRGEWLVSNGVLVARELSCLHVQLEETGDQKSSEHRVQLVVPGSCEGPQEASVGTGTFRFHCPACWEQELSIRLQDAPEEQLKAPLSALPSGQVVRLVFPTSQEPLMRVELKKEAGLRELAVRLGFGPCAEEQAFLSRRKQVVAAALRQALQLDGDLQEDEIPVVAIMATGGGIRAMTSLYGQLAGLKELGLLDCVSYITGASGSTWALANLYEDPEWSQKDLAGPTELLKTQVTKNKLGVLAPSQLQRYRQELAERARLGYPSCFTNLWALINEALLHDEPHDHKLSDQREALSHGQNPLPIYCALNTKGQSLTTFEFGEWCEFSPYEVGFPKYGAFIPSELFGSEFFMGQLMKRLPESRICFLEGIWSNLYAANLQDSLYWASEPSQFWDRWVRNQANLDKEQVPLLKIEEPPSTAGRIAEFFTDLLTWRPLAQATHNFLRGLHFHKDYFQHPHFSTWKATTLDGLPNQLTPSEPHLCLLDVGYLINTSCLPLLQPTRDVDLILSLDYNLHGAFQQLQLLGRFCQEQGIPFPPISPSPEEQLQPRECHTFSDPTCPGAPAVLHFPLVSDSFREYSAPGVRRTPEEAAAGEVNLSSSDSPYHYTKVTYSQEDVDKLLHLTHYNVCNNQEQLLEALRQAVQRRRQRRPH", "length": 781 }, "evidence": [ { "id": "A0A4X1V0R9", "url": "https://omabrowser.org/oma/group/A0A4X1V0R9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0C870-1", "protein_name": "Bifunctional peptidase and (3S)-lysyl hydroxylase JMJD7", "gene_name": "JMJD7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAEAALEAVRSELREFPAAARELCVPLAVPYLDKPPTPLHFYRDWVCPNRPCIIRNALQHWPALQKWSLPYFRATVGSTEVSVAVTPDGYADAVRGDRFMMPAERRLPLSFVLDVLEGRAQHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEALGKMPDAVNFWLGEAAAVTSLHKDHYENLYCVVSGEKHFLFHPPSDRPFIPYELYTPATYQLTEEGTFKVVDEEAMEKVPWIPLDPLAPDLARYPSYSQAQALRCTVRAGEMLYLPALWFHHVQQSQGCIAVNFWYDMEYDLKYSYFQLLDSLTKASGLD", "length": 316 }, "evidence": [ { "id": "A0A4X1V0R9", "url": "https://omabrowser.org/oma/group/A0A4X1V0R9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V0R9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0R9" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V0R9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0R9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V0R9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0R9" } ], "pmid": "" }, { "name": "phosphatidylcholine lysophospholipase activity", "id": "GO:0004622", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004622", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V0R9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0R9" } ], "pmid": "" }, { "name": "phospholipase A2 activity", "id": "GO:0004623", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004623", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V0R9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0R9" } ], "pmid": "" }, { "name": "calcium-dependent phospholipid binding", "id": "GO:0005544", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005544", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V0R9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0R9" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V0R9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0R9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "glycerophospholipid catabolic process", "id": "GO:0046475", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046475", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V0R9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0R9" } ], "pmid": "" }, { "name": "leukotriene biosynthetic process", "id": "GO:0019370", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019370", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V0R9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0R9" } ], "pmid": "" }, { "name": "glycerol metabolic process", "id": "GO:0006071", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006071", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V0R9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0R9" } ], "pmid": "" }, { "name": "prostaglandin biosynthetic process", "id": "GO:0001516", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001516", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V0R9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0R9" } ], "pmid": "" }, { "name": "phospholipid catabolic process", "id": "GO:0009395", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009395", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V0R9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0R9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 61, "end_pos": 63, "annotation": "n_glycosylation_sequon" }, { "start_pos": 620, "end_pos": 622, "annotation": "n_glycosylation_sequon" }, { "start_pos": 701, "end_pos": 703, "annotation": "n_glycosylation_sequon" }, { "start_pos": 725, "end_pos": 727, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "15177", "name": "", "equation": "a 1-acyl-sn-glycero-3-phosphocholine + H2O = sn-glycerol 3-phosphocholine + a fatty acid + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "15177", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/15177" } ] }, { "id": "15801", "name": "", "equation": "a 1,2-diacyl-sn-glycero-3-phosphocholine + H2O = a 1-acyl-sn-glycero-3-phosphocholine + a fatty acid + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "15801", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/15801" } ] }, { "id": "36231", "name": "", "equation": "a 1-O-alkyl-2-acyl-sn-glycero-3-phosphocholine + H2O = a 1-O-alkyl-sn-glycero-3-phosphocholine + a fatty acid + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "36231", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/36231" } ] }, { "id": "40427", "name": "", "equation": "1-hexadecanoyl-2-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-sn-glycero-3-phosphocholine + H2O = 1-hexadecanoyl-sn-glycero-3-phosphocholine + (5Z,8Z,11Z,14Z)-eicosatetraenoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "40427", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/40427" } ] }, { "id": "40451", "name": "", "equation": "1-octadecanoyl-2-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-sn-glycero-3-phosphate + H2O = 1-octadecanoyl-sn-glycero-3-phosphate + (5Z,8Z,11Z,14Z)-eicosatetraenoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "40451", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/40451" } ] }, { "id": "40519", "name": "", "equation": "1-octadecanoyl-2-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-sn-glycero-3-phosphocholine + H2O = 1-octadecanoyl-sn-glycero-3-phosphocholine + (5Z,8Z,11Z,14Z)-eicosatetraenoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "40519", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/40519" } ] }, { "id": "40811", "name": "", "equation": "1-hexadecanoyl-2-(9Z,12Z-octadecadienoyl)-sn-glycero-3-phosphocholine + H2O = (9Z,12Z)-octadecadienoate + 1-hexadecanoyl-sn-glycero-3-phosphocholine + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "40811", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/40811" } ] }, { "id": "41067", "name": "", "equation": "1-O-hexadecyl-2-(5Z,8Z,11Z,14Z)-eicosatetraenoyl-sn-glycero-3-phosphocholine + H2O = 1-O-hexadecyl-sn-glycero-3-phosphocholine + (5Z,8Z,11Z,14Z)-eicosatetraenoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "41067", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/41067" } ] }, { "id": "41071", "name": "", "equation": "1-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-2-hexadecanoyl-sn-glycero-3-phosphocholine + H2O = 1-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-sn-glycero-3-phosphocholine + hexadecanoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "41071", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/41071" } ] }, { "id": "41075", "name": "", "equation": "1,2-di-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-sn-glycero-3-phosphocholine + H2O = 1-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-sn-glycero-3-phosphocholine + (5Z,8Z,11Z,14Z)-eicosatetraenoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "41075", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/41075" } ] }, { "id": "41087", "name": "", "equation": "1-octadecanoyl-2-(9Z,12Z,15Z-octadecatrienoyl)-sn-glycero-3-phosphocholine + glycerol = 1-(9Z,12Z,15Z-octadecatrienoyl)-glycerol + 1-octadecanoyl-sn-glycero-3-phosphocholine", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "41087", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/41087" } ] }, { "id": "41099", "name": "", "equation": "1-octadecanoyl-2-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-sn-glycero-3-phosphocholine + glycerol = 1-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-glycerol + 1-octadecanoyl-sn-glycero-3-phosphocholine", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "41099", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/41099" } ] }, { "id": "41123", "name": "", "equation": "1,2-di-(9Z-octadecenoyl)-sn-glycero-3-phospho-(1'-sn-glycerol) + H2O = 1-(9Z-octadecenoyl)-sn-glycero-3-phospho-(1'-sn-glycerol) + (9Z)-octadecenoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "41123", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/41123" } ] }, { "id": "41271", "name": "", "equation": "1-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-2-O-hexadecyl-sn-glycero-3-phosphocholine + H2O = 2-O-hexadecyl-sn-glycero-3-phosphocholine + (5Z,8Z,11Z,14Z)-eicosatetraenoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "41271", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/41271" } ] }, { "id": "41307", "name": "", "equation": "1-octadecanoyl-2-(9Z,12Z,15Z-octadecatrienoyl)-sn-glycero-3-phosphocholine + H2O = (9Z,12Z,15Z)-octadecatrienoate + 1-octadecanoyl-sn-glycero-3-phosphocholine + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "41307", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/41307" } ] }, { "id": "53688", "name": "", "equation": "2-[(11R)-hydroxy-(5Z,8Z,12E,14Z)-eicosatetraenoyl]-sn-glycero-3-phosphocholine + H2O = (11R)-hydroxy-(5Z,8Z,12E,14Z)-eicosatetraenoate + sn-glycerol 3-phosphocholine + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "53688", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/53688" } ] }, { "id": "53692", "name": "", "equation": "2-(prostaglandin E2)-sn-glycero-3-phosphocholine + H2O = prostaglandin E2 + sn-glycerol 3-phosphocholine + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "53692", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/53692" } ] }, { "id": "53696", "name": "", "equation": "2-[(15R)-hydroxy-(5Z,8Z,11Z,13E)-eicosatetraenoyl]-sn-glycero-3-phosphocholine + H2O = (15R)-hydroxy-(5Z,8Z,11Z,13E)-eicosatetraenoate + sn-glycerol 3-phosphocholine + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "53696", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/53696" } ] }, { "id": "53700", "name": "", "equation": "2-[(15S)-hydroxy-(5Z,8Z,11Z,13E)-eicosatetraenoyl]-sn-glycero-3-phosphocholine + H2O = (15S)-hydroxy-(5Z,8Z,11Z,13E)-eicosatetraenoate + sn-glycerol 3-phosphocholine + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "53700", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/53700" } ] }, { "id": "53704", "name": "", "equation": "2-(prostaglandin E2)-sn-glycero-3-phosphoethanolamine + H2O = sn-glycero-3-phosphoethanolamine + prostaglandin E2 + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "53704", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/53704" } ] }, { "id": "R-SSC-1482604", "name": "PA is hydrolyzed to 1-acyl LPA by PLA2[1] (OM)", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, mitochondrial outer membrane", "input_participant_list": [], "output_participant_list": [ "R-ALL-1524103" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1482604", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1482604" } ] }, { "id": "R-SSC-1482612", "name": "2-acyl LPC is hydrolyzed to GPCho by PLA2[8]", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, endoplasmic reticulum membrane", "input_participant_list": [ "R-ALL-975614" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1482612", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1482612" } ] }, { "id": "R-SSC-1482656", "name": "PA is hydrolysed to 1-acyl LPA by PLA2[1]", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, endoplasmic reticulum membrane", "input_participant_list": [ "R-ALL-426755" ], "output_participant_list": [ "R-ALL-1500604" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1482656", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1482656" } ] }, { "id": "R-SSC-1482685", "name": "1-acyl LPC is hydrolyzed to GPCho by PLA2[8]", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, endoplasmic reticulum membrane", "input_participant_list": [ "R-ALL-1524028" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1482685", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1482685" } ] }, { "id": "R-SSC-1482745", "name": "PG is hydrolyzed to 1-acyl LPG by PLA2G4B (IM)", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial inner membrane, mitochondrial matrix", "input_participant_list": [ "R-ALL-1524042" ], "output_participant_list": [ "R-ALL-1524027", "R-ALL-1524085" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1482745", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1482745" } ] }, { "id": "R-SSC-1482771", "name": "PS is hydrolyzed to 1-acyl LPS by PLA2[9]", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, endoplasmic reticulum membrane", "input_participant_list": [ "R-ALL-1500646" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1482771", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1482771" } ] }, { "id": "R-SSC-1482847", "name": "PG is hydrolysed to 2-acyl LPG by PLA2G4B (IM)", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial inner membrane, mitochondrial matrix", "input_participant_list": [], "output_participant_list": [ "R-ALL-1524047" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1482847", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1482847" } ] }, { "id": "R-SSC-1482856", "name": "PC is hydrolyzed to 1-acyl LPC by PLA2[5]", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, endoplasmic reticulum membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1482856", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1482856" } ] }, { "id": "R-SSC-1482862", "name": "PC is hydrolysed to 2-acyl LPC by PLA2[7]", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, endoplasmic reticulum membrane", "input_participant_list": [ "R-ALL-426925" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1482862", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1482862" } ] }, { "id": "R-SSC-1482884", "name": "PE is hydrolyzed to 1-acyl LPE by PLA2[2]", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, endoplasmic reticulum membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1482884", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1482884" } ] }, { "id": "R-SSC-1482900", "name": "PG is hydrolyzed to 1-acyl LPG by PLA2[1]", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, endoplasmic reticulum membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1482900", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1482900" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-1500604", "participant_name": "1-acyl LPA [cytosol]", "crossref": [ { "id": "16975", "database": "ChEBI", "url": "" }, { "id": "C00681", "database": "COMPOUND", "url": "" } ] }, { "participant_id": "R-ALL-1500646", "participant_name": "PS [endoplasmic reticulum membrane]", "crossref": [ { "id": "11750", "database": "ChEBI", "url": "" }, { "id": "C02737", "database": "KEGG Gene", "url": "" }, { "id": "L-1-PHOSPHATIDYL-SERINE", "database": "AraCyc", "url": "" }, { "id": "C02737", "database": "COMPOUND", "url": "" } ] }, { "participant_id": "R-ALL-1524027", "participant_name": "1-acyl LPG [mitochondrial inner membrane]", "crossref": [ { "id": "C18126", "database": "COMPOUND", "url": "" }, { "id": "62747", "database": "ChEBI", "url": "" } ] }, { "participant_id": "R-ALL-1524028", "participant_name": "1-acyl LPC [endoplasmic reticulum membrane]", "crossref": [ { "id": "17504", "database": "ChEBI", "url": "" }, { "id": "C04230", "database": "COMPOUND", "url": "" } ] }, { "participant_id": "R-ALL-1524042", "participant_name": "PG [mitochondrial inner membrane]", "crossref": [ { "id": "64716", "database": "ChEBI", "url": "" } ] }, { "participant_id": "R-ALL-1524047", "participant_name": "2-acyl LPG [mitochondrial inner membrane]", "crossref": [ { "id": "27923", "database": "ChEBI", "url": "" } ] }, { "participant_id": "R-ALL-1524085", "participant_name": "LCFA(-) [mitochondrial inner membrane]", "crossref": [ { "id": "C00060", "database": "COMPOUND", "url": "" }, { "id": "57560", "database": "ChEBI", "url": "" } ] }, { "participant_id": "R-ALL-1524103", "participant_name": "LCFA(-) [mitochondrial outer membrane]", "crossref": [ { "id": "C00060", "database": "COMPOUND", "url": "" }, { "id": "57560", "database": "ChEBI", "url": "" } ] }, { "participant_id": "R-ALL-426755", "participant_name": "PA [endoplasmic reticulum membrane]", "crossref": [ { "id": "57739", "database": "ChEBI", "url": "" }, { "id": "C00416", "database": "COMPOUND", "url": "" } ] }, { "participant_id": "R-ALL-426925", "participant_name": "PC [endoplasmic reticulum membrane]", "crossref": [ { "id": "57643", "database": "ChEBI", "url": "" }, { "id": "C00157", "database": "COMPOUND", "url": "" } ] }, { "participant_id": "R-ALL-975614", "participant_name": "2-acyl LPC [endoplasmic reticulum membrane]", "crossref": [ { "id": "16728", "database": "ChEBI", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1V0R9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0R9" }, { "id": "PS50004", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50004" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2", "eco_id": "ECO_0000259", "start_pos": 1, "end_pos": 112, "start_aa": "Met", "end_aa": "Phe", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A4X1V0R9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0R9" }, { "id": "PS51210", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51210" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PLA2c", "eco_id": "ECO_0000259", "start_pos": 246, "end_pos": 780, "start_aa": "Glu", "end_aa": "Glu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 61, "end_pos": 63 }, { "start_pos": 620, "end_pos": 622 }, { "start_pos": 701, "end_pos": 703 }, { "start_pos": 725, "end_pos": 727 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"categories": [ "Protein Classification" ] }, { "id": "PF03370", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03370", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-3322077", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3322077", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_005671337", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005671337", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1V0S1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0S1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1V0S1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0S1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSCTRMIQVLDPRPLTSSVMPVDVAMRLCLAHSPPLKSFLGPYDDFQRRNFVNKLKPLKPCLNMKQEAKSQNDWKPSHNQAKKRVVFADSKGLSLTAIHVFSDLPEEPVWDLQFDLLDLNDISSGLKRHEEKNLILDFPQPSADYLSFRNHFQKNFVCLENCSLQERMVTGTVKVKNVSFEKKVQIRITFDTWQNYTDVDCVYMKNMYGGSESDTFSFAIDLPAVIPTKEKIEFCISYHANGQVFWDNNEGQNYRIVHAQWKPDGVQTQMASQDSAYHRAPPKAELESPVFGSPRLASGLFPEWQSWGRVENLASYR", "length": 317, "header": "tr|A0A4X1V0S1-1|A0A4X1V0S1_PIG Isoform 1 of Protein phosphatase 1 regulatory subunit 3C OS=Sus scrofa OX=9823 GN=PPP1R3C PE=4 SV=1 CANONICAL=A0A4X1V0S1-1" }, "isoforms": [ { "isoform_ac": "A0A4X1V0S1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0S1/entry", "sequence": { "sequence": "MSCTRMIQVLDPRPLTSSVMPVDVAMRLCLAHSPPLKSFLGPYDDFQRRNFVNKLKPLKPCLNMKQEAKSQNDWKPSHNQAKKRVVFADSKGLSLTAIHVFSDLPEEPVWDLQFDLLDLNDISSGLKRHEEKNLILDFPQPSADYLSFRNHFQKNFVCLENCSLQERMVTGTVKVKNVSFEKKVQIRITFDTWQNYTDVDCVYMKNMYGGSESDTFSFAIDLPAVIPTKEKIEFCISYHANGQVFWDNNEGQNYRIVHAQWKPDGVQTQMASQDSAYHRAPPKAELESPVFGSPRLASGLFPEWQSWGRVENLASYR", "length": 317, "header": "tr|A0A4X1V0S1-1|A0A4X1V0S1_PIG Isoform 1 of Protein phosphatase 1 regulatory subunit 3C OS=Sus scrofa OX=9823 GN=PPP1R3C PE=4 SV=1 CANONICAL=A0A4X1V0S1-1" }, "locus": { "chromosome": "14", "start_pos": 103277893, "end_pos": 103274921, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011452.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011452.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011154.2", "url": "https://www.ensembl.org/id/ENSSSCP00000011154.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V0S1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0S1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:641349", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:641349", "resource": "KEGG Pathway" }, { "id": "R-SSC-3322077", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3322077", "resource": "Reactome", "description": "Glycogen synthesis" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZDP3-1", "protein_name": "Protein phosphatase 1 regulatory subunit 3C", "gene_name": "PPP1R3C", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { 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"MSCTRMIQVLDPRPLTSSVMPVDVAVRLCLAHSPPLKSFLSPYDDFQRRNFVNKLKPLKSCLNIKQEARAQDDWKPSHNQAKKRVVFADSKGLSLTAIHVFSDLPEEPVWDLQFDLLDLNDISSGLKLHEEKNLILDFPQPSADYLSFRNHFQKNSVCLENCSLQERTVTGTVKVKNMSFEKKVQIRITFDSWQSYNDVDCAYMKNVYGGSESDTFSFAIDLPSVIPTKEKIEFCVAYHANGQVFWDNNEGQNYRIVHVQWKPDGVQTQMAAQDCAFHQAPPPKAELESTVFGSPRLASGLFPEWQSWGRMENLASYR", "length": 318 }, "evidence": [ { "id": "A0A4X1V0S1", "url": "https://omabrowser.org/oma/group/A0A4X1V0S1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5U2R5-1", "protein_name": "Protein phosphatase 1 regulatory subunit 3C", "gene_name": "Ppp1r3c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"A0A4X1V0S1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0S1" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "molecular adaptor activity", "id": "GO:0060090", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060090", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V0S1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0S1" } ], "pmid": "" }, { "name": "protein phosphatase 1 binding", "id": "GO:0008157", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008157", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V0S1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0S1" } ], "pmid": "" }, { "name": "glycogen binding", "id": "GO:2001069", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2001069", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V0S1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0S1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "glycogen biosynthetic process", 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"url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08969", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-5689901", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5689901", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "NP_001230272", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230272", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1V134", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V134", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1V134-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V134-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SCY8", "url": "https://www.uniprot.org/uniprotkb/F1SCY8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SCY8-1", "url": "https://www.uniprot.org/uniprotkb/F1SCY8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDQPFTVNALRKLAAMPDHTDVSLSPEERVRALSKLGCNITINEDITPRRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFVEKLPSHRDYQQCAVPEKQDIMKKLKEIAFPRTDELKKDLLKKYNIQYQEYLQSKNKYKAEVLKKLEHQRLIEAERKRVAQMRQQQLESEQFLFFEDQLKKQELARGQMRSQETPALSEQTDGSALSCFSTHQNNSLLDVFADQPNKSDATNYAGHSPPVNRALKPAATLSAGQNLVVEGLRYVVLSRDLCHRFLLLAESNTVRGIETCGILCGKLTHNEFTITHLIVPKQSAGPDYCDVENVEELFSVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTDAGMLEVSACKKKGFHPHTKDPRLFSICKHVLVKDIKIIVLDLR", "length": 436, "header": "tr|A0A4X1V134-1|A0A4X1V134_PIG Isoform 1 of AMSH-like protease OS=Sus scrofa OX=9823 GN=STAMBPL1 PE=3 SV=1 CANONICAL=A0A4X1V134-1" }, "isoforms": [ { "isoform_ac": "A0A4X1V134-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V134/entry", "sequence": { "sequence": "MDQPFTVNALRKLAAMPDHTDVSLSPEERVRALSKLGCNITINEDITPRRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFVEKLPSHRDYQQCAVPEKQDIMKKLKEIAFPRTDELKKDLLKKYNIQYQEYLQSKNKYKAEVLKKLEHQRLIEAERKRVAQMRQQQLESEQFLFFEDQLKKQELARGQMRSQETPALSEQTDGSALSCFSTHQNNSLLDVFADQPNKSDATNYAGHSPPVNRALKPAATLSAGQNLVVEGLRYVVLSRDLCHRFLLLAESNTVRGIETCGILCGKLTHNEFTITHLIVPKQSAGPDYCDVENVEELFSVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTDAGMLEVSACKKKGFHPHTKDPRLFSICKHVLVKDIKIIVLDLR", "length": 436, "header": "tr|A0A4X1V134-1|A0A4X1V134_PIG Isoform 1 of AMSH-like protease OS=Sus scrofa OX=9823 GN=STAMBPL1 PE=3 SV=1 CANONICAL=A0A4X1V134-1" }, "locus": { "chromosome": "14", "start_pos": 100859304, "end_pos": 100825774, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083882.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083882.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063748.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063748.1" } ] } }, { "isoform_ac": "F1SCY8-1", "url": "https://www.uniprot.org/uniprotkb/F1SCY8/entry", "sequence": { "sequence": "MDQPFTVNALRKLAAMPDHTDVSLSPEERVRALSKLGCNITINEDITPRRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFVEKLPSHRDYQQCAVPEKQDIMKNKYKAEVLKKLEHQRLIEAERKRVAQMRQQQLESEQFLFFEDQLKKQELARGQMRSQETPALSEQTDGSALSCFSTHQNNSLLDVFADQPNKSDATNYAGHSPPVNRALKPAATLSAGQNLVVEGLRYVVLSRDLCHRFLLLAESNTVRGIETCGILCGKLTHNEFTITHLIVPKQSAGPDYCDVENVEELFSVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTDAGMLEVSACKKKGFHPHTKDPRLFSICKHVLVKDIKIIVLDLR", "length": 404, "header": "tr|F1SCY8-1|A0A4X1V134_PIG Computationally mapped isoform of AMSH-like protease OS=Sus scrofa OX=9823 GN=STAMBPL1 PE=3 SV=3 CANONICAL=A0A4X1V134-1" }, "locus": { "chromosome": "14", "start_pos": 100859304, "end_pos": 100825774, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011431.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011431.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011134.3", "url": "https://www.ensembl.org/id/ENSSSCP00000011134.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SCY8", "url": "https://www.uniprot.org/uniprotkb/F1SCY8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152651", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152651", "resource": "KEGG Pathway" }, { "id": "R-SSC-5689901", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5689901", "resource": "Reactome", "description": "Metalloprotease DUBs" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2LTP6-1", "protein_name": "AMSH-like protease", "gene_name": "Stambpl1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEQPFTVNSLKKLAAMPDHTDVSLSPEERVRALSKLGCNISINEDITPRRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFVEKLPSHRDYQQCEVPEKQDIMKKLKETAFPRTDELKKDLLRKYNTEYQEYLQSENKYKAEILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFFEDQLKKQELARGQMRGQDSAVLSEQTDGSSLSCFSTHQNNSLQNVFADQPPKSDGSDLADHSPPVNRALKPAATLSAVQNLVVEGLRCVVLSRDLCHKFLLLAESNTVRGIETCGILCGKLTHNEFTITHVIVPKQSAGPDYCDVENVEELFSVQDQHGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVCTCKKKGFHPHTKDPRLFSVCSHVLVKDIKTILLDLR", "length": 436 }, "evidence": [ { "id": "A0A4X1V134", "url": "https://omabrowser.org/oma/group/A0A4X1V134/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8I5ZXJ2-1", "protein_name": "AMSH-like protease", "gene_name": "Stambpl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEQPFTVNSLKKLAAMPDHTDVSLSPEERVRALSKLGCNISINEDITPRRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFVEKLPSHRDYQQCAVPEKQDIMKKLKEIAFPRTDELKTDLLRKYNIEYQEYLQSKNKYKAEILKKLEHQRLIEAERQRIAQMRQQQLESEQFLFFEDQLKKQELARGQTRGQDSLVLSEQTDGSGLSCFSTHQNNSLRNVFADHPQKSDVCDLANYSPPVNRALKPAATLSAVQNLVVEGLRCVVLSRDLCHKFLLLADSNTVRGIETCGILCGKLTHNEFTITHVVVPKQSAGPDYCDVENVEELFSVQDQHGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSTCKKKGFHPHTKDPKLFSICSHVLVKDIKTTVLDLR", "length": 436 }, "evidence": [ { "id": "A0A4X1V134", "url": "https://omabrowser.org/oma/group/A0A4X1V134/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8M3AYE4-1", "protein_name": "AMSH-like protease isoform X1", "gene_name": "stambpl1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDQGFSFSTLKKLAAEPDHTDVTLPAVERVRALSKMGYNIEINEDIAPRRYFRSGVEMERMAAVYLEEGSLENAFVLYNKFITLFVEKLPSHRDYQQCNIPEKQVIMKKLQEVAFPRKDQLKRLLHEKYSKEHSEYLKSQTQAMAVDMCGAQLQKMSMLEEERQRVAQLRKMQIESEQFRYFEDQLRRQELASRRDDAGPKVPEQTDGSCLSQTPRNHVRLDPNRNKPAAPIPKPAATLAAVQNQRVEGLRRVLIPRDLTYRFLLLADSNTARGIETCGVLCGKLTHNEFVLTHVIVPKQSAGPDYCDMENVEELFSYQDHHNLLTLGWIHTHPTQTAFLSSVDLHTHSSYQLMLPEAIAIVCAPKHNESFPAHQCWNGRSGRMQIERFSPPLERPSSVHYLQAHCGERLKNDSPGPQVTEEDGKYQYQQTIENFYLYLSLLEGFFVFIYFTKRYCDRTPQLRCLL", "length": 466 }, "evidence": [ { "id": "A0A4X1V134", "url": "https://omabrowser.org/oma/group/A0A4X1V134/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8V0ZLD2-1", "protein_name": "AMSH-like protease", "gene_name": "STAMBPL1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEALEKKSDLLGLQTEGNMEQPFSISSLKKLVAIPDHTDISVTPEERVRALSKLGSNIAINEDITPRRYFRSGVEMERMASIYMEEGNLENAFVFYNKFITLFVEKLPSHRDYHQCAVPEKQVIIKKLKEVAFPRTDELKRDLLKKYSLEYQEYMQNKNKCRTESLKKLEQQKLIEAEKKRIAHMRQQQLESEQFQFFEDQLKKQELARDQKIKESMVMSEQIDGSMLSCISVPENSSSPTTLLEKKEKSGMCVSTGDSPPVNRALKPAAALSAVQTQLAEALRGVILPRDLCHKFLLLAEANTLRGIETCGILCGKLTHNEFTITHVIVPKQSSGPDYCDMENVEELFGIQDQFDLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHNDTGIFRLTNAGMLEVSACKKKGFHPHTKDPRLFNPCTHVVGKDIKIIVLDLR", "length": 453 }, "evidence": [ { "id": "A0A4X1V134", "url": "https://omabrowser.org/oma/group/A0A4X1V134/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q76N33-1", "protein_name": "AMSH-like protease", "gene_name": "Stambpl1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEQPFTVNSLKKLAAMPDHTDVSLSPEERVRALSKLGCNISINEDITPRRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFVEKLPSHRDYQQCAVPEKQDIMKKLKEIAFPRTDELKTDLLRKYNIEYQEYLQSKNKYKAEILKKLEHQRLIEAERQRIAQMRQQQLESEQFLFFEDQLKKQELARGQIRGQDSPVLSEQTDGSALSCFSTHQSNSLRNAFADHPHKSDGSNFANYSPPVNRALKPAATLSAVQNLVVEGLRCVVLSRDLCHKFLLLADSNTVRGIETCGILCGKLTHNEFTITHVVVPKQSAGPDYCDVENVEELFNVQDQHGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSTCKKKGFHPHTKDPKLFSICSHVLVKDIKTTVLDLR", "length": 436 }, "evidence": [ { "id": "A0A4X1V134", "url": "https://omabrowser.org/oma/group/A0A4X1V134/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96FJ0-1", "protein_name": "AMSH-like protease", "gene_name": "STAMBPL1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDQPFTVNSLKKLAAMPDHTDVSLSPEERVRALSKLGCNITISEDITPRRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDELKNDLLKKYNVEYQEYLQSKNKYKAEILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFFEDQLKKQELARGQMRSQQTSGLSEQIDGSALSCFSTHQNNSLLNVFADQPNKSDATNYASHSPPVNRALTPAATLSAVQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGKLTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSACKKKGFHPHTKEPRLFSICKHVLVKDIKIIVLDLR", "length": 436 }, "evidence": [ { "id": "A0A4X1V134", "url": "https://omabrowser.org/oma/group/A0A4X1V134/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "positive regulation of TORC1 signaling", "id": "GO:1904263", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1904263", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V134", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V134" } ], "pmid": "" }, { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V134", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V134" } ], "pmid": "" }, { "name": "protein K63-linked deubiquitination", "id": "GO:0070536", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070536", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V134", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V134" } ], "pmid": "" }, { "name": "cellular response to L-leucine", "id": "GO:0071233", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071233", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V134", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V134" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "endosome", "id": "GO:0005768", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005768", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V134", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V134" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V134", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V134" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V134", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V134" } ], "pmid": "" }, { "name": "K63-linked deubiquitinase activity", "id": "GO:0061578", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061578", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V134", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V134" } ], "pmid": "" }, { "name": "metal-dependent deubiquitinase activity", "id": "GO:0140492", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140492", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V134", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V134" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 219, "end_pos": 221, "annotation": "n_glycosylation_sequon" }, { "start_pos": 231, "end_pos": 233, "annotation": "n_glycosylation_sequon" }, { "start_pos": 39, "end_pos": 41, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1V134", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V134" }, { "id": "PS50249", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50249" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "MPN", "eco_id": "ECO_0000259", "start_pos": 269, "end_pos": 397, "start_aa": "Val", "end_aa": "Leu", "glycosite_overlap": [] } ], 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], "protein_names": [ { "name": "Lipase", "type": "recommended", "evidence": [ { "id": "A0A4X1V169", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V169/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Catalyzes the hydrolysis of triacylglycerols to yield free fatty acids, diacylglycerol, monoacylglycerol, and glycerol. 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"crossref": [ { "id": "A0A4X1V169", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1V169", "database": "AlphaFoldDB", "categories": [] }, { "id": "IPR000073", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000073", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR025483", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025483", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029058", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029058", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "YACEEHT", "url": "https://omabrowser.org/oma/group/YACEEHT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1V169", "url": "https://www.orthodb.org/?gene=A0A4X1V169", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11005", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11005", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00561", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00561", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6809371", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6809371", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "12044", "url": "https://www.rhea-db.org/rhea/12044", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "39931", "url": "https://www.rhea-db.org/rhea/39931", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "40047", "url": "https://www.rhea-db.org/rhea/40047", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1V169", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V169", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1V169-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V169-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMWLFLTTTYLICGTLNAGGYFNLEKEANPEVWMNISEIIEYNGYPSEEYEVTTQDGYILSINRIPHGRRDTKNTGTRPVVYMQHALFADSASWLQNFANGSLGFLLADAGYDVWMGNSRGNTWSRRHKTLSLTQEEFWAFSFDEMAKYDLPGIVDFIVNKTGQEKLYFVGHSLGTTIGFVAFATIPELAQRIKMNFALGPTISLKYTMGIFTRLFLLPNSAIKKFFGTKGVFLEDKARKSSSIKLCNNKILWVICSEIMSLWAGFNKKNMNMSRMDVYMSHAPTGSSVQNILHIKQLYQSDEFRAYDWGSEAENMRHYNQSRPPLYDLTAMEVPTAIWAGGNDVLVTPQDVARILPQIKNLRYFKLLPDWNHFDFIWGLDAAQRVYSKIIDLMKLYP", "length": 398, "header": "tr|A0A4X1V169-1|A0A4X1V169_PIG Isoform 1 of Lipase OS=Sus scrofa OX=9823 GN=LIPN PE=3 SV=1 CANONICAL=A0A4X1V169-1" }, "isoforms": [ { "isoform_ac": "A0A4X1V169-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V169/entry", "sequence": { "sequence": "MMWLFLTTTYLICGTLNAGGYFNLEKEANPEVWMNISEIIEYNGYPSEEYEVTTQDGYILSINRIPHGRRDTKNTGTRPVVYMQHALFADSASWLQNFANGSLGFLLADAGYDVWMGNSRGNTWSRRHKTLSLTQEEFWAFSFDEMAKYDLPGIVDFIVNKTGQEKLYFVGHSLGTTIGFVAFATIPELAQRIKMNFALGPTISLKYTMGIFTRLFLLPNSAIKKFFGTKGVFLEDKARKSSSIKLCNNKILWVICSEIMSLWAGFNKKNMNMSRMDVYMSHAPTGSSVQNILHIKQLYQSDEFRAYDWGSEAENMRHYNQSRPPLYDLTAMEVPTAIWAGGNDVLVTPQDVARILPQIKNLRYFKLLPDWNHFDFIWGLDAAQRVYSKIIDLMKLYP", "length": 398, "header": "tr|A0A4X1V169-1|A0A4X1V169_PIG Isoform 1 of Lipase OS=Sus scrofa OX=9823 GN=LIPN PE=3 SV=1 CANONICAL=A0A4X1V169-1" }, "locus": { "chromosome": "14", "start_pos": 100709312, "end_pos": 100693595, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042156.2", "url": "https://www.ensembl.org/id/ENSSSCT00000042156.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035682.1", "url": "https://www.ensembl.org/id/ENSSSCP00000035682.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V169", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V169" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-6809371", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6809371", "resource": "Reactome", "description": "Formation of the cornified envelope" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2K430-1", "protein_name": "Lipase", "gene_name": "Lipn", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPVMWLFLTTACLIRGTLSAGGFFENTVNPEVWMNASEIITYNGYPSEEYDVTTADGYILAINRIPHGRGQTGHAGPRPVVYMQHALFADNAYWLENFPNGSLGFLLADAGYDVWMGNSRGNTWSRRHKTLSVNEEKFWAFSFDEMAKYDLPGIIDFIVNKTGQEKLYFIGHSLGTTIGFIAFSTMPELAQRIKMNFALGPVISFKYPTSIFTSFFLLPRSMIKLMFGTKGFFLEDKNAKMSYVTVCNKKLLRPMCSEFMSLWAGFNKKNMNMSRLDVYMSHAPTGSSIQNILHIKQLYQSDEFRAYDWGSEAENMNHYNQSRPPLYDLTAMKVPTAIWAGGHDVLVTPQDVARILPQITNLRYFKQFPEWNHFDFVWGLDAPQRLYSKIIGLMKEYR", "length": 398 }, "evidence": [ { "id": "A0A4X1V169", "url": "https://omabrowser.org/oma/group/A0A4X1V169/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A3L7HYR2-1", "protein_name": "Lipase", "gene_name": "Lipn", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MPMMWLFLTTTCLIHETLSVSELFDLENEVNPEVWMNTSEIIIYNGYPSEEYEVTTADGYILTLNRIPHGRAQAGLTGTRPVVYMQHALFADNAYWLENFANGSLGFLLADAGYDVWMGNSRGNTWSRRHKTLSANEEKFWAFSFDEMAKYDLPGIIDFIVNKTGQEKLYFIGHSLGTTIGFIAFSTMPELAQRIKMNFAMGPVISFKYPTSIFTSFFLLPNSIIKHIFGTKGFFLEDKKAKATYIKVCNRKILRPMCSEFMSLWAGFNKKNMNMSRLDVYMSHAPTGSSIQNILHIKQLYRSDEFRAYDWGSEAENMNHYNQSRPPIYDLTAMKVPTAIWAGGHDALITPQDVARILPQVTNLRYFKLFPDWNHFDFVWGLDAPQRLYSKIIGLMREYL", "length": 400 }, "evidence": [ { "id": "A0A4X1V169", "url": "https://omabrowser.org/oma/group/A0A4X1V169/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3MVZ9-1", "protein_name": "Lipase", "gene_name": "LIPN", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": 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Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. As a component of the minor spliceosome, involved in the splicing of U12-type introns in pre-mRNAs. 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"protein_name": "Small nuclear ribonucleoprotein E", "gene_name": "SNRPE", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSVSN", "length": 92 }, "evidence": [ { "id": "A0A4X1V3M7", "url": "https://omabrowser.org/oma/group/A0A4X1V3M7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "P62304-1", "protein_name": "Small nuclear ribonucleoprotein E", "gene_name": "SNRPE", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSVSN", "length": 92 }, "evidence": [ { "id": "A0A4X1V3M7", "url": "https://omabrowser.org/oma/group/A0A4X1V3M7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P62305-1", "protein_name": "Small nuclear ribonucleoprotein E", "gene_name": "Snrpe", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSVSN", "length": 92 }, "evidence": [ { "id": "A0A4X1V3M7", "url": "https://omabrowser.org/oma/group/A0A4X1V3M7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q12330-1", "protein_name": "Small nuclear ribonucleoprotein E", "gene_name": "SME1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSNKVKTKAMVPPINCIFNFLQQQTPVTIWLFEQIGIRIKGKIVGFDEFMNVVIDEAVEIPVNSADGKEDVEKGTPLGKILLKGDNITLITSAD", "length": 94 }, "evidence": [ { "id": "A0A4X1V3M7", "url": "https://omabrowser.org/oma/group/A0A4X1V3M7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q7ZUG0-1", "protein_name": "Small nuclear ribonucleoprotein E", "gene_name": "snrpe", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAYRGQGQKVQKVMVQPINLIFRYLQNRSRISVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEVHMKTKNRKPLGRIMLKGDNITLLQSVSN", "length": 92 }, "evidence": [ { "id": "A0A4X1V3M7", "url": "https://omabrowser.org/oma/group/A0A4X1V3M7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9VLV5-1", "protein_name": "Probable small nuclear ribonucleoprotein E", "gene_name": "SmE", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSFKGNPKVQKVMVQPINLIFRYLQNRSRVQVWLYENISLRIEGHIVGFDEYMNLVLDDAEEVYVKTRQRRNLGRIMLKGDNITLIQNVSPTKD", "length": 94 }, "evidence": [ { "id": "A0A4X1V3M7", "url": "https://omabrowser.org/oma/group/A0A4X1V3M7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9ZV45-1", "protein_name": "Small nuclear ribonucleoprotein E", "gene_name": "PCP", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": 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Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V4A0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V4A0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] }, { "title": "Comprehensive analysis of lncRNAs involved in skeletal muscle development in ZBED6-knockout Bama pigs.", "journal": "BMC genomics", "date": "2021", "authors": "Wang D, Pu Y, Li Y, Pan D, Wang S, Tian W, Ma Y, Jiang L", "evidence": [ { "database": "RefSeq", "id": "NP_001381604", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001381604" } ], "reference": [ { "type": "PubMed", "id": "34348644", "url": "https://glygen.org/publication/PubMed/34348644" } ] } ], "pathway": [], "orthologs": [], 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1V4F7-1", "uniprot_ac": "A0A4X1V4F7", "uniprot_id": "A0A4X1V4F7_PIG", "mass": { "chemical_mass": 28028.0, "monoisotopic_mass": 28028.0 }, "refseq": { "ac": "XP_020958261", "name": "B-cell receptor-associated protein 29", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020958261" }, "gene_names": [ { "name": "BCAP29", "type": "recommended", "evidence": [ { "id": "A0A4X1V4F7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V4F7" } ] }, { "name": "BCAP29", "type": "synonym", "evidence": [ { "id": "XP_020958261", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020958261" } ] } ], "protein_names": [ { "name": "B-cell receptor-associated protein", "type": "recommended", "evidence": [ { "id": "A0A4X1V4F7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V4F7/entry#names_and_taxonomy" } ] }, { "name": "B-cell receptor-associated protein 29", "type": "synonym", "evidence": [ { "id": "XP_020958261", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020958261" } ] }, { "name": "BCR-associated protein", "type": "synonym", "evidence": [ { "id": "A0A4X1V4F7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V4F7/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Plays a role in the export of secreted proteins in the ER.", "evidence": [ { "database": "UniProtKB", "id": "I3LRE0", "url": "https://www.uniprot.org/uniprotkb/I3LRE0#function" }, { "database": "UniProtKB", "id": "RU367026", "url": "https://www.uniprot.org/uniprotkb/RU367026#function" }, { "database": "UniProtKB", "id": "A0A5G2QWU4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWU4#function" }, { "database": "UniProtKB", "id": "A0A4X1V4F7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V4F7#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V4F7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V4F7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "BCAP29", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V4F7", "locus": { "chromosome": "9", "start_pos": 107351981, "end_pos": 107292309, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000022869", "url": "https://www.ensembl.org/id/ENSSSCG00000022869" } ] } } ], "crossref": [ { "id": "ENSSSCG00000022869", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000022869", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100622655", "url": "https://www.ncbi.nlm.nih.gov/gene/100622655", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR008417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040463", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040463", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041672", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041672", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100622655", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622655", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FMARFWN", "url": "https://omabrowser.org/oma/group/FMARFWN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1V4F7", "url": "https://www.orthodb.org/?gene=A0A4X1V4F7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12701", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12701", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12701:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12701:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05529", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05529", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18035", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18035", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020958261", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020958261", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1V4F7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V4F7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1V4F7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V4F7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QWU4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWU4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QWU4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWU4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LRE0", "url": "https://www.uniprot.org/uniprotkb/I3LRE0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LRE0-1", "url": "https://www.uniprot.org/uniprotkb/I3LRE0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTLQWAAVATFLYAEIGLILIFCLPFIPPQRWQKIFSFSVWGKIATFWNKAFLTIIVLLIVLFLDAVREVRKYSSAHAIERSSASRPAAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRLVTLITQLAKELSNKGVLKSQAESTNKAAKKFMEENERLKRLLKNYGKEEDHILEEENKKLVEDKEKLQTELKKVSDALSKAQNDVMTMKVQSERLSKEYDLLLKEHSELQDHARKGSKKGL", "length": 241, "header": "tr|A0A4X1V4F7-1|A0A4X1V4F7_PIG Isoform 1 of B-cell receptor-associated protein OS=Sus scrofa OX=9823 GN=BCAP29 PE=1 SV=1 CANONICAL=A0A4X1V4F7-1" }, "isoforms": [ { "isoform_ac": "A0A4X1V4F7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V4F7/entry", "sequence": { "sequence": "MTLQWAAVATFLYAEIGLILIFCLPFIPPQRWQKIFSFSVWGKIATFWNKAFLTIIVLLIVLFLDAVREVRKYSSAHAIERSSASRPAAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRLVTLITQLAKELSNKGVLKSQAESTNKAAKKFMEENERLKRLLKNYGKEEDHILEEENKKLVEDKEKLQTELKKVSDALSKAQNDVMTMKVQSERLSKEYDLLLKEHSELQDHARKGSKKGL", "length": 241, "header": "tr|A0A4X1V4F7-1|A0A4X1V4F7_PIG Isoform 1 of B-cell receptor-associated protein OS=Sus scrofa OX=9823 GN=BCAP29 PE=1 SV=1 CANONICAL=A0A4X1V4F7-1" }, "locus": { "chromosome": "9", "start_pos": 107334738, "end_pos": 107292803, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055016.2", "url": "https://www.ensembl.org/id/ENSSSCT00000055016.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041749.1", "url": "https://www.ensembl.org/id/ENSSSCP00000041749.1" } ] } }, { "isoform_ac": "A0A5G2QWU4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWU4/entry", "sequence": { "sequence": "MTLQWAAVATFLYAEIGLILIFCLPFIPPQRWQKIFSFSVWGKIATFWNKAFLTIIVLLIVLFLDAVREVRKYSSAHAIERSSASRPAAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRLVTLITQLAKELSNKGVLKSQAESTNKAAKKFMEENERLKRLLKNYGKEEDHILEEENKKLVEDKEKLQTELKKVSDALSKAQNDVMTMKVQSERLSKEYDLLLKEHSELQATLPLAQSPL", "length": 240, "header": "tr|A0A5G2QWU4-1|A0A4X1V4F7_PIG Computationally mapped isoform of B-cell receptor-associated protein OS=Sus scrofa OX=9823 GN=BCAP29 PE=1 SV=1 CANONICAL=A0A4X1V4F7-1" }, "locus": { "chromosome": "9", "start_pos": 107345891, "end_pos": 107292804, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066816.1", "url": "https://www.ensembl.org/id/ENSSSCT00000066816.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068615.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068615.1" } ] } }, { "isoform_ac": "I3LRE0-1", "url": "https://www.uniprot.org/uniprotkb/I3LRE0/entry", "sequence": { "sequence": "MTLQWAAVATFLYAEIGLILIFCLPFIPPQRWQKIFSFSVWGKIATFWNKAFLTIIVLLIVLFLDAVREVRKYSSAHAIERSSASRPAAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRLVTLITQLAKELSNKGVLKSQAESTNKAAKKFMEENERLKRLLKNYGKEEDHILEEENKKLVEDKEKLQTELKKVSDGNGVCVCRSRKSIMIFYATTLHCFPQNKTNG", "length": 227, "header": "tr|I3LRE0-1|A0A4X1V4F7_PIG Computationally mapped isoform of B-cell receptor-associated protein OS=Sus scrofa OX=9823 GN=BCAP29 PE=1 SV=3 CANONICAL=A0A4X1V4F7-1" }, "locus": { "chromosome": "9", "start_pos": 107312922, "end_pos": 107292804, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027982.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027982.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000026674.3", "url": "https://www.ensembl.org/id/ENSSSCP00000026674.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LRE0", "url": "https://www.uniprot.org/uniprotkb/I3LRE0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100622655", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622655", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7G0D9-1", "protein_name": "B-cell receptor-associated protein", "gene_name": "Bcap29", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTIQWAAVASFLYAEIGLILIFCLPFIPPQRWQKIFSFSVWSKIASFWNKAFLTIIILLIVLFLDAVREVRKYSSTQVTEKSSAGRPSAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRLVSLITQLAKEISNKAVLKIQAENTNKAAKKFMEENEKLKWVLKNNGKDEEQILETENKKLVEDQEKLKTELKKASDVGGVVWEGITGMASLSLWPQCALCLLFGLNVSVKMFLPPCLCFAIMDSNPQKRPFKGTKRCGNYEDAVRETFKRI", "length": 271 }, "evidence": [ { "id": "A0A4X1V4F7", "url": "https://omabrowser.org/oma/group/A0A4X1V4F7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "E1C310-1", "protein_name": "Endoplasmic reticulum transmembrane protein", "gene_name": "BCAP29", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MTVQWTAVAAFLYGEVGVLLVLCLPFISPLRWQKIFMIPLWSKMAVFWNKMFLTIIVLLIILFLDAVREVKKYSAIQLNEKVANVNANAIDHIQMKLFRSQRNLYISGFSLFLWLVLRRTVTLLTQLAKGMASHAALETQVNDATEAAKKYMAENERLQEALNEKGSGENKEMAETTNGMLRKEIGQLKAELQKTSNALHKANNEVAAVKKQSEGLRREYDHLMKEYERLQNASSEAEDKKDL", "length": 243 }, "evidence": [ { "id": "A0A4X1V4F7", "url": "https://omabrowser.org/oma/group/A0A4X1V4F7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F7F288-1", "protein_name": "B-cell receptor-associated protein", "gene_name": "Bcap29", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTIQWAAVASFLYAEIGLILIFCLPFISPQRWHKIFSFSVWTKIASFWNKAFLTIIILLVVLFLDAVREVKKYSSINVVEKNSASRPAAYEQAQMRLFRSQRNLYISGFSLFFWLVLRRLVTLITQLAKEITNKGVLKIQAENTNKAAKKFMEENERLKLVLKNNDNTEEHVLETENKKLVEDKERLKTELKKASDALFKAQNDVMTMKIQSERLSKEYDRLLKEHSELQNRLEKENKKGL", "length": 241 }, "evidence": [ { "id": "A0A4X1V4F7", "url": "https://omabrowser.org/oma/group/A0A4X1V4F7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q61334-1", "protein_name": "B-cell receptor-associated protein 29", "gene_name": "Bcap29", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTIQWAAVASFLYAEIGLILLFCLPFIPPQRWQKIFSFSVWGKIASFWNKAFLTIIILLIILFLDAVREVRKYSSTNVVEKNSAIRPSAFEHTQMKLFRSQRNLYISGFSLFFWLVLRRLVTLITQLAKEIANKGVLKIQAENTNKAAKKFMEENEKLKLGLRNDNAEEHLLEAENKKLIESKENLKTELKKASDALLKAQNDVMTMKIQSERLSKEYDRLLKEHSELQNRLEKEKKKGL", "length": 240 }, "evidence": [ { "id": "A0A4X1V4F7", "url": "https://omabrowser.org/oma/group/A0A4X1V4F7/", "database": "OMA" } ], "glygen_name": 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"sequence": { "sequence": "MGLQLAEEKGTRGTTNPPKAEEEQACPVPQEEEEEVRVLTLPLQAHHAMEKMEEFVYKVWEGRWRVIPYDVLPDWLKDNDYLLHGHRPPMPSFRACFKSIFRIHTETGNIWTHLLGFVLFLFLGILTMLRPNMYFMAPLQEKVVFGMFFLGAVLCLSFSWLFHTVYCHSEKVSRTFSKLDYSGIALLIMGSFVPWLYYSFYCSPQPRLIYLSIVCVLGISAIIVAQWDRFATPKHRQTRAGVFLGLGLSGVVPTMHFTIAEGFVKATTVGQMGWFFLMAVMYITGAGLYAARIPERFFPGKFDIWFQSHQIFHVLVVAAAFVHFYGVSNLQEFRYGLEGGCTDDSLL", "length": 347, "header": "tr|A0A5G2QGY4-1|A0A4X1V4J0_PIG Computationally mapped isoform of Adiponectin receptor 1 OS=Sus scrofa OX=9823 GN=ADIPOR1 PE=3 SV=1 CANONICAL=A0A4X1V4J0-1" }, "locus": { "chromosome": "10", "start_pos": 24915552, "end_pos": 24908232, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081070.2", "url": "https://www.ensembl.org/id/ENSSSCT00000081070.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063074.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063074.1" } ] } }, { "isoform_ac": "A0A8D0QJ28-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0QJ28/entry", "sequence": { "sequence": "MSSHKGPVGAQGNGAPAGSREADTVELAELGPLLEEKGTRGTTNPPKAEEEQACPVPQEEEEEVRVLTLPLQAHHAMEKMEEFVYKVWEGRWRVIPYDVLPDWLKDNDYLLHGHRPPMPSFRACFKSIFRIHTETGNIWTHLLATAHLPLHRLCPGHFCHHCGAVGPVCHS", "length": 171, "header": "tr|A0A8D0QJ28-1|A0A4X1V4J0_PIG Computationally mapped isoform of Adiponectin receptor 1 OS=Sus scrofa OX=9823 GN=ADIPOR1 PE=3 SV=1 CANONICAL=A0A4X1V4J0-1" }, "locus": { "chromosome": "10", "start_pos": 24915589, "end_pos": 24910324, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011961.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011961.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011654.4", "url": "https://www.ensembl.org/id/ENSSSCP00000011654.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", 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"database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1V5V6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V5V6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1V5V6-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V5V6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1V706", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V706", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1V706-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V706-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RZI9", "url": "https://www.uniprot.org/uniprotkb/F1RZI9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RZI9-1", "url": "https://www.uniprot.org/uniprotkb/F1RZI9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRTHTRGAPSVFFIYLFCLASAYVTDENPKVMIPFTNANYDSHPMLFFSRAEVAELQLRAASSHEHIAERLTEAVRTMLSSPLEYLPPWDPKEYSARWNEIYGNNLGALAMFCVLYPDNIEARDMAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYNYLSKTQQERFLEVIANASGYMYETSYRRGWGFQYLHNHQPTNCMALLTGSLVLMNQGYLQEAYLWTKQVLTIMEKSLVLLREVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFDINHFGHPWLKQHFAFMYRTILPGFQRTVAIADSNYNWFYGPESQLVFLDKFVMRNGSGNWLADQIRRNRVLEGPGTPSKGQRWCTLHTEFLWYDASLKSVPPPDFGIPTLHYFEDWGVVTYGSALPAEINRSFLSFKSGKLGGRAIYDIVHRNKYKDWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTFFNNVLMFSPAVSKSCFSPWEGQVTEDCSSKWSKYKHDLAASCQGRVVAAGEKNGVVFIRGEGVGAYNPQLNLKKVQRNLILLHPQLLLLVDQIHLGEDSPLETAASFFHNVDFPFEETVVDGVHGAFIRQRDGLYKMYWMDDTGYSEKGTFSSVTYPRGYPYNGTNYVNVTMHLRSPITRAAYLFIGPSVDVQSFSIHGDAQQLDVFIATSEHAYAAYLWTGETTGQSAFAQVIADRQKILFDRSSAIKSTIVPEVKDYAAIVEQNVQHFKPVFQLLEKQILSRVQNTASFRKTAERLLRFSDKRQTEEAIDRIFAISQQQQQSKSKKNRRVSKRYKFVDAVPDIFAQIEVNEKKIRQKAQILAQKELPIDEDEEMKDLLDFADVTYEKHQNGDALKGQFGQARLVTTTHSRAPVLSASYTKLFLILNIAIFFVMLAMQLTYFQRAQSLHGQRCLYAVLLIDSCILLWLYSSCSQSQC", "length": 957, "header": "tr|A0A4X1V5U5-1|A0A4X1V5U5_PIG Isoform 1 of Dermatan sulfate epimerase OS=Sus scrofa OX=9823 GN=DSE PE=3 SV=1 CANONICAL=A0A4X1V5U5-1" }, "isoforms": [ { "isoform_ac": "A0A4X1V5U5-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V5U5/entry", "sequence": { "sequence": 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"tr|A0A4X1V5U5-1|A0A4X1V5U5_PIG Isoform 1 of Dermatan sulfate epimerase OS=Sus scrofa OX=9823 GN=DSE PE=3 SV=1 CANONICAL=A0A4X1V5U5-1" }, "locus": { "chromosome": "1", "start_pos": 82062933, "end_pos": 82022998, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042745.2", "url": "https://www.ensembl.org/id/ENSSSCT00000042745.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031816.1", "url": "https://www.ensembl.org/id/ENSSSCP00000031816.1" } ] } }, { "isoform_ac": "A0A4X1V5V6-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V5V6/entry", "sequence": { "sequence": "MRTHTRGAPSVFFIYLFCLASAYVTDENPKVMIPFTNANYDSHPMLFFSRAEVAELQLRAASSHEHIAERLTEAVRTMLSSPLEYLPPWDPKEYSARWNEIYGNNLGALAMFCVLYPDNIEARDMAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYNYLSKTQQERFLEVIANASGYMYETSYRRGWGFQYLHNHQPTNCMALLTGSLVLMNQGMMPA", "length": 228, "header": "tr|A0A4X1V5V6-1|A0A4X1V5U5_PIG Computationally mapped isoform of Dermatan sulfate epimerase OS=Sus scrofa OX=9823 GN=DSE PE=3 SV=1 CANONICAL=A0A4X1V5U5-1" }, "locus": { "chromosome": "1", "start_pos": 82061194, "end_pos": 82022998, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083117.1", "url": "https://www.ensembl.org/id/ENSSSCT00000083117.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060241.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060241.1" } ] } }, { "isoform_ac": "A0A4X1V706-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V706/entry", "sequence": { "sequence": "MRTHTRGAPSVFFIYLFCLASAYVTDENPKVMIPFTNANYDSHPMLFFSRAEVAELQLRAASSHEHIAERLTEAVRTMLSSPLEYLPPWDPKEYSARWNEIYGNNLGALAMFCVLYPDNIEARDMAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYNYLSKTQQERFLEVIANASGYMYETSYRRGWGFQYLHNHQPTNCMALLTGSLVLMNQGYLQEAYLWTKQVLTIMEKSLVLLREVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFDINHFGHPWLKQHFAFMYRTILPGMMPA", "length": 308, "header": "tr|A0A4X1V706-1|A0A4X1V5U5_PIG Computationally mapped isoform of Dermatan sulfate epimerase OS=Sus scrofa OX=9823 GN=DSE PE=3 SV=1 CANONICAL=A0A4X1V5U5-1" }, "locus": { "chromosome": "1", "start_pos": 82061194, "end_pos": 82022998, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072009.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072009.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070284.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070284.1" } ] } }, { "isoform_ac": "F1RZI9-1", "url": "https://www.uniprot.org/uniprotkb/F1RZI9/entry", "sequence": { "sequence": "MRTHTRGAPSVFFIYLFCLASAYVTDENPKVMIPFTNANYDSSHEHIAERLTEAVRTMLSSPLEYLPPWDPKEYSARWNEIYGNNLGALAMFCVLYPDNIEARDMAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYNYLSKTQQERFLEVIANASGYMYETSYRRGWGFQYLHNHQPTNCMALLTGSLVLMNQGYLQEAYLWTKQVLTIMEKSLVLLREVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFDINHFGHPWLKQHFAFMYRTILPGFQRTVAIADSNYNWFYGPESQLVFLDKFVMRNGSGNWLADQIRRNRVLEGPGTPSKGQRWCTLHTEFLWYDASLKSVPPPDFGIPTLHYFEDWGVVTYGSALPAEINRSFLSFKSGKLGGRAIYDIVHRNKYKDWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTFFNNVLMFSPAVSKSCFSPWEGQVTEDCSSKWSKYKHDLAASCQGRVVAAGEKNGVVFIRGEGVGAYNPQLNLKKVQRNLILLHPQLLLLVDQIHLGEDSPLETAASFFHNVDFPFEETVVDGVHGAFIRQRDGLYKMYWMDDTGYSEKGTFSSVTYPRGYPYNGTNYVNVTMHLRSPITRAAYLFIGPSVDVQSFSIHGDAQQLDVFIATSEHAYAAYLWTGETTGQSAFAQVIADRQKILFDRSSAIKSTIVPEVKDYAAIVEQNVQHFKPVFQLLEKQILSRVQNTASFRKTAERLLRFSDKRQTEEAIDRIFAISQQQQQSKSKKNRRVSKRYKFVDAVPDIFAQIEVNEKKIRQKAQILAQKELPIDEDEEMKDLLDFADVTYEKHQNGDALKGQFGQARLVTTTHSRAPVLSASYTKLFLILNIAIFFVMLAMQLTYFQRAQSLHGQRCLYAVLLIDSCILLWLYSSCSQSQC", "length": 937, "header": "tr|F1RZI9-1|A0A4X1V5U5_PIG Computationally mapped isoform of Dermatan sulfate epimerase OS=Sus scrofa OX=9823 GN=DSE PE=3 SV=4 CANONICAL=A0A4X1V5U5-1" }, "locus": { "chromosome": "1", "start_pos": 82062933, "end_pos": 82022998, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004906.5", "url": "https://www.ensembl.org/id/ENSSSCT00000004906.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004790.4", "url": "https://www.ensembl.org/id/ENSSSCP00000004790.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V5V6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V5V6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100625171", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625171", "resource": "KEGG Pathway" }, { "id": "R-SSC-2022923", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2022923", "resource": "Reactome", "description": "DS-GAG biosynthesis" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2JU02-1", "protein_name": "Dermatan sulfate epimerase", "gene_name": "Dse", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGLHRTGPYGPTRATSLPARRFPGGLSIPGQPCWLGDLLSGCPAQSPPNCSTEFRNEWPGLDGLPGLPSPTGSFKDDLAALETWRSGATMRTHTRGAPTVFFICLLCCVSAYITDENPEVMIPFTNANYDSHPMLYFSRKDVAELQLRAASSHEHIAARLTEAVHTMLTNPLEYLPPWDHKEYSARWNEIYGNNLGALAMFCVLYPENIEAREMAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYNYLSKTQQETFLEVIANASGYMYETSYRRGWGFQYLHNHQPTNCMALLTGSLVLMNQGYLQEAYLWTKQVLSIMEKSLVLLREVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFDINHFGHPWLKHHFAFMYRTVLPGFQRTVAIADSNYNWFYGPESQLVFLDKFVMRNGSGNWLADQIRKNRVVEGPGTPSKGQRWCTLHTEFLWYDASLKSVPPLDFGTPTLHYFEDWGVVTYGSALPAEINRSFLSFKSGKLGGRAIYDIVHRNKYKEWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTFFNNVLMFSPAVSKSCFSPWEGQVTEDCSSKWSKYKHDLAASCQGRVIAAEEKDGVVFIRGEGVGAYNPMLNLKNIHRNLILLHPQLLLLVDQIHLGEESPLETAASFFHNVDVPFEETVVDGVHGAFIRQRDGLYKMYWMDDTGYSEKATFASVTYPRGYPYNGTNYVNVTMHLRSPITRAAYLFIGPSVDVQSFSIHGDPQRLDVFVATSEHAYATYLWTGENTGQSAFAQVIADHQKILFDQSSAIKSTTVPEVKDYAAIVERNLQHFKPVFQLLEKQILSRVQNTASFRKTAERLLRFSDKRQTEEAIDRIFAISQQQRQQRGKSKKSRRTGKHYKFVDAVPDIFAQIEVNEKKIRQKAQILAQKEQPIDEDEEMKDLLDFADVTYEKHRNGGSMKDGFGQARMVTSHNRAPSLSASYTRLFLILNIAIFFVMLAMQLTYFQRAQSLHGQRCLYAVLLIDSCVLLWLYSSCSQSQC", "length": 1047 }, "evidence": [ { "id": "A0A4X1V5U5", "url": "https://omabrowser.org/oma/group/A0A4X1V5U5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A3Q1MGN4-1", "protein_name": "Dermatan sulfate epimerase", "gene_name": "DSE", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRTHTRGAPSVFFICLFCFVSACVTDENPEVMIPFTNANYDSHPMLYFSRAEVAELQLRAASSHEHIAARLTEAVNTMLSSPLEYLPPWDPKEYSARWNEIYGNNLGALAMFCVLYPENMEARDMAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYNYLSKTQQEKFLEVIANASGYMYETSYRRGWGFQYLHNHQPTNCMALLTGSLVLMNQGYLQEAYLWTKQVLTIMEKSLVLLREVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFDINHFGHPWLKQHFAFMYRTILPGFQRTVAIADSNYNWFYGPESQLVFLDKFVMRNGSGNWLADQIRRNRVVEGPGTPSKGQRWCTLHTEFLWYDASLKSVPPPDFGTPTLHYFEDWGVVTYGSALPAEINRSFLSFKSGKLGGRAIYDIVHRNKYKDWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTFFNNVLMFSPAASKSCFSPWEGQVTEDCSSKWSKYKHDPAASCQGRVVAAVEKNGVVFIRGEGVGAYNPQLHLRNVQRNLILLHPQLLLLVDQIHLGEDSPLERAASFFHNVDFPFEETVVDGVHGALIRQRDGLYKMYWMDDTGYSEKGTFASVTYPRGYPYNGTNYVNVTTHLRSPVTRAAYLFIGPSIDVQSFSIHGDAQQLDVFVATSEHAYATYLWTGETAGQSAFAQVIADRQKILFDRSSAIRSSVVPEVKDYAALVEQNLQHFKPVFQLLEKQILSRVRNTASFRKTAERLLRFSDKRQTEEAIDRIFAISQQQQQQQSKSKKNRRGGKRYKFVDAVPDIFAQIEVNERKVRQKAQILAQKELPVDEDEEMKDLLDFADITYEKHKNGDVMNGRFGQARMVTTTHSRAPALSASYTRLFLILNIAIFFVMLAMQLTYFQRAQSLHGQRCLYAVLLIDSCILLWLYSSCSQSQC", "length": 959 }, "evidence": [ { "id": "A0A4X1V5U5", "url": "https://omabrowser.org/oma/group/A0A4X1V5U5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8M2BBN5-1", "protein_name": "Dermatan-sulfate epimerase isoform X1", "gene_name": "dse", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRTYTRGAPTVFFISALWVLAAPGPAAVDPTGGVAFLGGNYEGTHPMLYFGLTEVEELQRAAIGTHKALAHQIREAGEAILERPEEYLPPWSPAEFSARWNEVYGNNLGLLSMFCMLYPHRAGALDVAKEYMERMAAQPNWMVKDAPWDEVPIAHSLVGFATAFDFLYEYLSKGQQERFIQVIGNASRYMYEKSYHRGWGFQYLHNHQPTNCVALLTGSLVVMNQGYLQEAYLWTKQAISIMEKSMVLLQDVTDGSLYEGVAYGTYTTRSLFQYMYLVQRHFDIGHFSHPWLQKHFAFLYRTLLPGFQRTVAIADSNYNWFYGPESQLVFLDRYVMRNGSGNWLAEVIRQNRVLEGPGQAGRGQRWCTLHTEFLWYDASLRPTPPPDYGTSHLHHFEDWGVVTYGSALPAGKNHTFLSFKSGKLGGRAIFDIVHQNKYKDWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTSLNNAVMFGPAVSESCFAPWEGQVTEACNSKWLKYKHGQAADCHGQVEAALEQQGMVFIRGEGQAAYNPELKIKIFQRNLLLLHPQLLLMVDHVELHSGSLTRSMSAFFHNTDLPFLKTQIDGVHGALIRHGNETSKMFWLDDTGSSEKAVVGYRSYPRGYPYNGSNYVNVTMPLRYPTSRLAYIFFGSGVDVQSFSVHGDSERLEIYLATRDHTYNIYLFTDQLPTKPMAMVLVDQQKVVFERTARIKEQPIEEVEEYANVVEDNLQHVKPVFQQLERHILSRVLNTDTFHKTAERLLKSSDKRKTSGNIQKMFSLSKKKGKGGKKTSFSDSLPDIFAQIEASEKKERQRTVKRVYEELPEEGDGDSRAFVDYSDLRKGKKVGFVKGRKFKEVRVGATAESEDVFSTTSYIRLFLISNIATFFVLLAVLLTRFQRAQSLHTQRCLYCVLLIDSFVLLCLYSSCSQAQC", "length": 949 }, "evidence": [ { "id": "A0A4X1V5U5", "url": "https://omabrowser.org/oma/group/A0A4X1V5U5/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "G3HJW4-1", "protein_name": "Dermatan-sulfate epimerase isoform X1", "gene_name": "Dse", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKTHTRGAPSVFFIYLLCFVSAYITDENPEVMIPFTNANYDSHPMLYFSRTEVADLQLKAASSHEHIAARLTEAVHAMLSNPLEYLPPWDHKDYSARWNEIYGNNLGALAMFCVLYPENLEARDMAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYNYLSKTQQETFLEVIANASSYMYETSYRRGWGFQYLHNHQPTNCMALLTGSLVLMNQGYLQEAYLWTKQVLTIMEKSLVLLREVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFDINHFGHPWLKQHFAFMYRTILPGFQRTVAIADSNYNWFYGPESQLVFLDKFVMRNGSGNWLADQIRKNRVVEGPGTPSKGQRWCTLHTEFLWYDASLKSVPPPDFGTPTLHYFEDWGVVTYGSALPAEINRSFLSFKSGKLGGRAIYDIVHRNKYKDWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTFFNNVLMFSPAVSKSCFSPWEGQVTEDCSSKWSKYKHDLAASCQGRVVAAEEKDGVVFIRGEGVGAYNPLLNLKNIQRNLVLLHPQLLLLVDQIHLGEESPLETAASFFHNVDVPFEETVVDGVHGAFIRQRDGLYKMYWMDDTGYSEKATFASVTYPRGYPYNGTNYVNVTMHLRSPITRAAYLFIGPSVDVQSFSIHGDPQRLDVFVATSEHAYATYLWTGESPGQSAFAQVIADHQKILFDRSSAIKSTTVPEVKDYAAIVEHSLQHFKPVFQLLEKQILSRVQNTASFRKTAERLLRFSDKRQTEEAIDRIFAISQQQRQQQGKSKKSRRAGKRYKFVDAVPDIFAQIEVNEKKVRQKAQILAQKELPIDEDEEMKDLLDFADVTYEKHKNGGSVKGGFGQMRMVTTSRNRAPSLSASYTRLFLILNIAIFLVMLAMQLTYFQRAQSLHGQRCLYAVLLVDSCVLLWLYSSCSQSQC", "length": 959 }, "evidence": [ { "id": "A0A4X1V5U5", "url": "https://omabrowser.org/oma/group/A0A4X1V5U5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8BLI4-1", "protein_name": "Dermatan-sulfate epimerase", "gene_name": "Dse", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRTHTRGAPSVFFICLLCCVSAFITDENPEVMIPFTNANYDSHPMLYFSRKDVAELQLRAASSHEHIAARLTEAVHTMLTNPLEYLPPWDPKEYSARWNEIYGNNLGALAMFCVLYPENTEARDMAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYNYLSKTQQETFLEVIANASGYMYETSYRRGWGFQYLHNHQPTNCMALLTGSLILMNQGYLQEAYLWTKQVLSIMEKSLVLLREVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFDINHFGHPWLKQHFAFMYRTILPGFQRTVAIADSNYNWFYGPESQLVFLDKFVMRNGSGNWLADQIRRNRVVEGPGTPSKGQRWCTLHTEFLWYDASLKPVPPPDFGTPTLHYFEDWGVVTYGSALPAEINRSFLSFKSGKLGGRAIYDIVHRNKYKDWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTYFNNVLMFSPAVSKSCFSPWEGQVTEDCSSKWSKYKHDLAASCQGRVIAADEKDGVVFIRGEGVGAYNPMLNLKHIQRNLILLHPQLLLLVDQIHLGEESPLETAASFFHNVDVPFEETVVDGVHGALIRQRDGLYKMYWMDDTGYSEKANFASVMYPRGYPYNGTNYVNVTMHLRSPITRAAYLFIGPSVDVQSFSIHGDPQRLDVFIATSEHAYATYLWTGENTGHSAFAQVIADHQKILFDQSSAIKSTAVPEVKDYAAIVEQNLQHFKPVFQLLEKQILSRVQNTASFRKTAERLLRFSDKRQTEEAIDRIFAISQQQRQQRGKSKKSRKAGKHYKFVDAVPDIFAQIEVNEKKIRQKAQVLAQREQPIDEDEEMKDLLDFADVTYEKHKNEGSVKGGFGQVRMVTSHNRAPSLSASYTRLFLILNIAIFFVMLAMQLTYFQRAQSLHGQRCLYAVLLIDSCVLLWLYSSCSQSQC", "length": 958 }, "evidence": [ { "id": "A0A4X1V5U5", "url": "https://omabrowser.org/oma/group/A0A4X1V5U5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9UL01-1", "protein_name": "Dermatan-sulfate epimerase", "gene_name": "DSE", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRTHTRGAPSVFFIYLLCFVSAYITDENPEVMIPFTNANYDSHPMLYFSRAEVAELQLRAASSHEHIAARLTEAVHTMLSSPLEYLPPWDPKDYSARWNEIFGNNLGALAMFCVLYPENIEARDMAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYNYLSKTQQEKFLEVIANASGYMYETSYRRGWGFQYLHNHQPTNCMALLTGSLVLMNQGYLQEAYLWTKQVLTIMEKSLVLLREVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFNINHFGHPWLKQHFAFMYRTILPGFQRTVAIADSNYNWFYGPESQLVFLDKFVMRNGSGNWLADQIRRNRVVEGPGTPSKGQRWCTLHTEFLWYDGSLKSVPPPDFGTPTLHYFEDWGVVTYGSALPAEINRSFLSFKSGKLGGRAIYDIVHRNKYKDWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTFFNNVLMFSPAVSKSCFSPWVGQVTEDCSSKWSKYKHDLAASCQGRVVAAEEKNGVVFIRGEGVGAYNPQLNLKNVQRNLILLHPQLLLLVDQIHLGEESPLETAASFFHNVDVPFEETVVDGVHGAFIRQRDGLYKMYWMDDTGYSEKATFASVTYPRGYPYNGTNYVNVTMHLRSPITRAAYLFIGPSIDVQSFTVHGDSQQLDVFIATSKHAYATYLWTGEATGQSAFAQVIADRHKILFDRNSAIKSSIVPEVKDYAAIVEQNLQHFKPVFQLLEKQILSRVRNTASFRKTAERLLRFSDKRQTEEAIDRIFAISQQQQQQSKSKKNRRAGKRYKFVDAVPDIFAQIEVNEKKIRQKAQILAQKELPIDEDEEMKDLLDFADVTYEKHKNGGLIKGRFGQARMVTTTHSRAPSLSASYTRLFLILNIAIFFVMLAMQLTYFQRAQSLHGQRCLYAVLLIDSCILLWLYSSCSQSQC", "length": 958 }, "evidence": [ { "id": "A0A4X1V5U5", "url": "https://omabrowser.org/oma/group/A0A4X1V5U5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "dermatan sulfate proteoglycan metabolic process", "id": "GO:0050655", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050655", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V5U5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V5U5" } ], "pmid": "" }, { "name": "dermatan sulfate proteoglycan biosynthetic process", "id": "GO:0050651", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050651", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V5U5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V5U5" } ], "pmid": "" }, { "name": "chondroitin sulfate proteoglycan metabolic process", "id": "GO:0050654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050654", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V5U5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V5U5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V5U5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V5U5" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V5U5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V5U5" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V5U5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V5U5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "chondroitin-glucuronate 5-epimerase activity", "id": "GO:0047757", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0047757", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V5U5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V5U5" } ], "pmid": "" }, { "name": "isomerase activity", "id": "GO:0016853", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016853", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V5U5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V5U5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 183, "end_pos": 185, "annotation": "n_glycosylation_sequon" }, { "start_pos": 336, "end_pos": 338, "annotation": "n_glycosylation_sequon" }, { "start_pos": 411, "end_pos": 413, "annotation": "n_glycosylation_sequon" }, { "start_pos": 642, "end_pos": 644, "annotation": "n_glycosylation_sequon" }, { "start_pos": 648, "end_pos": 650, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1V5U5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V5U5" }, { "id": "PF16332", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16332" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Dermatan-sulfate epimerase-like N-terminal", "eco_id": "ECO_0000259", "start_pos": 43, "end_pos": 374, "start_aa": "His", "end_aa": "Tyr", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 183, "end_pos": 185 }, { "start_pos": 336, "end_pos": 338 }, { "start_pos": 411, "end_pos": 413 }, { "start_pos": 642, "end_pos": 644 }, { "start_pos": 648, "end_pos": 650 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1V6F2-1", "uniprot_ac": "A0A4X1V6F2", "uniprot_id": "A0A4X1V6F2_PIG", "mass": { "chemical_mass": 34878.0, "monoisotopic_mass": 34878.0 }, "refseq": { "ac": "XP_003126496", "name": "F-actin-capping protein subunit alpha-3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003126496" }, "gene_names": [ { "name": "CAPZA3", "type": "recommended", "evidence": [ { "id": "A0A4X1V6F2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V6F2" } ] }, { "name": "CAPZA3", "type": "synonym", "evidence": [ { "id": "XP_003126496", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003126496" } ] } ], "protein_names": [ { "name": "F-actin-capping protein subunit alpha", "type": 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"MKRKQKRFLQMTLIFMVALIFLPNIGLWSLYKDKHLVKSTEPGEQQTFPLGLGDGQFYAWTDGLRRKDWHDYGSIQKEAMRSGKGEHGKPYPLTEEDHDDSAYRENGFNIFVSNNIALERSLPDIRHANCKHKMYLERLPNTSIIIPFHNEGWTSLLRTIHSIINRTPESLIAEIILVDDFSDREHLKDKLEEYMARFSKVRIVRTKKREGLIRTRLLGASLARGEVLTFLDSHCEVNVNWLPPLLNQIALNHKTIVCPMIDVIDHNHFGYEAQAGDAMRGAFDWEMYYKRIPIPPELQRADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGEMFDVPCSRVGHIYRKYVPYKVPSGTSLARNLKRVAETWMDEFAEYIYQRRPEYRHLSTGDLSAQKELRKQLKCKDFKWFMAAVAWDVPKYYPPVEPPPAAWGELRNVAANLCVDSKHGATGTELRLDICVKDGSERTWSHEQLFTFGWREDIRPGEPLHTRKFCFDAISHNSPVTLYDCHGLKGNQLWGHRKDRTLFHPVSNSCMDCNPAEKKIFMARCDPLSETQQWIFEHINMTVLEKFNYHASS", "length": 601, "header": "tr|A0A4X1V6H3-1|A0A4X1V6H3_PIG Isoform 1 of Polypeptide N-acetylgalactosaminyltransferase OS=Sus scrofa OX=9823 GN=GALNTL6 PE=3 SV=1 CANONICAL=A0A4X1V6H3-1" }, "locus": { "chromosome": "14", "start_pos": 18143473, "end_pos": 16934791, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024965.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024965.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019965.3", "url": "https://www.ensembl.org/id/ENSSSCP00000019965.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V6H3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V6H3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100518755", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518755", "resource": "KEGG Pathway" }, { "id": "R-SSC-913709", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-913709", "resource": "Reactome", "description": "O-linked glycosylation of mucins" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V6H3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V6H3" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V6H3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V6H3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V6H3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V6H3" } ], "pmid": "" }, { "name": "carbohydrate binding", "id": "GO:0030246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030246", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V6H3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V6H3" } ], "pmid": "" }, { "name": "polypeptide N-acetylgalactosaminyltransferase activity", "id": "GO:0004653", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004653", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V6H3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V6H3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "protein O-linked glycosylation", "id": "GO:0006493", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006493", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V6H3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V6H3" } ], "pmid": "" }, { "name": "protein O-linked glycosylation via N-acetyl-galactosamine", "id": "GO:0016266", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016266", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V6H3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V6H3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 141, "end_pos": 143, "annotation": "n_glycosylation_sequon" }, { "start_pos": 165, "end_pos": 167, "annotation": "n_glycosylation_sequon" }, { "start_pos": 588, "end_pos": 590, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "23956", "name": "", "equation": "L-seryl-[protein] + UDP-N-acetyl-alpha-D-galactosamine = a 3-O-[N-acetyl-alpha-D-galactosaminyl]-L-seryl-[protein] + UDP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "23956", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/23956" } ] }, { "id": "52424", "name": "", "equation": "L-threonyl-[protein] + UDP-N-acetyl-alpha-D-galactosamine = a 3-O-[N-acetyl-alpha-D-galactosaminyl]-L-threonyl-[protein] + UDP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "52424", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/52424" } ] }, { "id": "R-SSC-913675", "name": "GALNTs transfer GalNAc to Mucins to form Tn antigens", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "Golgi lumen, Golgi membrane", "input_participant_list": [ "R-ALL-9942384" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-913675", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-913675" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-9942384", "participant_name": "UDP-GalNAc [Golgi lumen]", "crossref": [ { "id": "67138", "database": "ChEBI", "url": "" }, { "id": "ZINC000008551132", "database": "ZINC", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1V6H3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V6H3" }, { "id": "SM00458", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00458" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ricin B lectin", "eco_id": "ECO_0000259", "start_pos": 452, "end_pos": 585, "start_aa": "Pro", "end_aa": "Glu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [ { "glytoucan_ac": "G00027JG", "type": "Other", "subtype": "Other" }, { "glytoucan_ac": "G00030VN", "type": "O-linked", "subtype": "Core 3" }, { "glytoucan_ac": "G00031MO", "type": "O-linked", "subtype": "Core 1" }, { "glytoucan_ac": "G00032MO", "type": "O-linked", "subtype": "Core 1" }, { "glytoucan_ac": "G00033MO", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00034MO", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00034UM", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00035MO", "type": "O-linked", "subtype": "Core 3" }, { "glytoucan_ac": "G00036MO", "type": "O-linked", "subtype": "Core 3" }, { "glytoucan_ac": "G00037MO", "type": "O-linked", "subtype": "Core 4" }, { "glytoucan_ac": "G00038MO", "type": "O-linked", "subtype": "Core 4" }, { "glytoucan_ac": "G00039MO", "type": "O-linked", "subtype": "Core 5" }, { "glytoucan_ac": "G00040MO", "type": "O-linked", "subtype": "Core 5" }, { "glytoucan_ac": "G00041IL", "type": "O-linked", "subtype": "Core 3" }, { "glytoucan_ac": "G00041MO", "type": "O-linked", "subtype": "Core 6" }, { "glytoucan_ac": "G00042MO", "type": "O-linked", "subtype": "Core 6" }, { "glytoucan_ac": "G00043MO", "type": "O-linked", "subtype": "Core 7" }, { "glytoucan_ac": "G00044MO", "type": "O-linked", "subtype": "Core 7" }, { "glytoucan_ac": "G00063MO", "type": "Other", "subtype": "Other" }, { "glytoucan_ac": "G00069YC", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00079IK", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00094SE", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00112IO", "type": "O-linked", "subtype": "Core 3" }, { "glytoucan_ac": "G00139WK", "type": "O-linked", "subtype": "Core 1" }, { "glytoucan_ac": "G00140UB", "type": "O-linked", "subtype": "Core 7" }, { "glytoucan_ac": "G00140YZ", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00164QP", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00196CO", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00219VH", "type": "O-linked", "subtype": "Core 3" }, { "glytoucan_ac": "G00230IL", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00234GG", "type": "O-linked", "subtype": "Core 4" }, { "glytoucan_ac": "G00238CK", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00241VQ", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00249XF", "type": "O-linked", "subtype": "Core 4" }, { "glytoucan_ac": "G00257RE", "type": "O-linked", "subtype": "Core 4" }, { "glytoucan_ac": "G00257UQ", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00277SO", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00287UD", "type": "O-linked", "subtype": "Core 1" }, { "glytoucan_ac": "G00288RP", "type": "O-linked", "subtype": "Core 6" }, { "glytoucan_ac": "G00318OS", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00321UH", "type": "O-linked", "subtype": "Core 3" }, { "glytoucan_ac": "G00335JE", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00371DJ", "type": "O-linked", "subtype": "Core 3" }, { "glytoucan_ac": "G00372ZO", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00376RB", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00379PJ", "type": "O-linked", "subtype": "Core 8" }, { "glytoucan_ac": "G00383NC", "type": "O-linked", "subtype": "Core 3" }, { "glytoucan_ac": "G00387BU", "type": "Other", "subtype": "Other" }, { "glytoucan_ac": "G00390EC", "type": "O-linked", "subtype": "Core 8" }, { "glytoucan_ac": "G00394CR", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00423TL", "type": "O-linked", "subtype": "Core 1" }, { "glytoucan_ac": "G00428HK", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00430ZK", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00464AQ", "type": "Other", "subtype": "Other" }, { "glytoucan_ac": "G00467QU", "type": "O-linked", "subtype": "Core 1" }, { "glytoucan_ac": "G00468NI", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00496OX", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00520NI", "type": "O-linked", "subtype": "Core 3" }, { "glytoucan_ac": "G00523PT", "type": "O-linked", "subtype": "Core 6" }, { "glytoucan_ac": "G00542QA", "type": "O-linked", "subtype": "Core 4" }, { "glytoucan_ac": "G00546ZA", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00560KG", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00567EI", "type": "O-linked", "subtype": "Core 8" }, { "glytoucan_ac": "G00569WM", "type": "O-linked", "subtype": "Core 3" }, { "glytoucan_ac": "G00598IA", "type": "O-linked", "subtype": "Core 4" }, { "glytoucan_ac": "G00641XC", "type": "O-linked", "subtype": "Core 6" }, { "glytoucan_ac": "G00652BK", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00653TI", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00654GN", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00660CI", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00675GF", "type": "O-linked", "subtype": "Core 9" }, { "glytoucan_ac": "G00682IE", "type": "O-linked", "subtype": "Core 1" }, { "glytoucan_ac": "G00707RC", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00728SN", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00729SA", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00745CN", "type": "O-linked", "subtype": "Core 3" }, { "glytoucan_ac": "G00745GK", "type": "O-linked", "subtype": "Core 8" }, { "glytoucan_ac": "G00754TS", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00769YD", "type": "O-linked", "subtype": "Core 5" }, { "glytoucan_ac": "G00771KB", "type": "Other", 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[ "Protein" ] }, { "id": "F1RSY8-1", "url": "https://www.uniprot.org/uniprotkb/F1RSY8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPLVKRNIDPRHLCHTALPRGIKNELECVTNISLANIIRQLSSLSKYAEDIFGELFNEAHSFSFRVNSLQERVDRLSVSVTQLDPKEEELSLQDITMRKAFRSSTIQDQQLFDRKTLPIPLQETYDVCEQPPPLNILTPYRDDGKEGLKFYTNPSYFFDLWKEKMLQDTEDKRKEKRKQKQKNLDRPHEPEKVPRAPHDRRREWQKLAQGPELAEDDANLLHKHIEVANGPASHFETRPQTYVDHMDGSYSLSALPFSQMSELLTRAEERVLVRPHEPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPTTALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSPVTVAALAHPPSGLHPTPSTAPGPHVPLMPPSPPSQVIPASEPKRHPSTLPVISDARSVLLEAIRKGIQLRKVEEQREQEAKHERIENDVATILSRRIAVEYSDSEDDSEFDEVDWLE", "length": 559, "header": "tr|A0A4X1V6V5-1|A0A4X1V6V5_PIG Isoform 1 of Wiskott-Aldrich syndrome protein family member OS=Sus scrofa OX=9823 GN=WASF1 PE=3 SV=1 CANONICAL=A0A4X1V6V5-1" }, "isoforms": [ { "isoform_ac": "A0A4X1V6V5-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V6V5/entry", "sequence": { "sequence": "MPLVKRNIDPRHLCHTALPRGIKNELECVTNISLANIIRQLSSLSKYAEDIFGELFNEAHSFSFRVNSLQERVDRLSVSVTQLDPKEEELSLQDITMRKAFRSSTIQDQQLFDRKTLPIPLQETYDVCEQPPPLNILTPYRDDGKEGLKFYTNPSYFFDLWKEKMLQDTEDKRKEKRKQKQKNLDRPHEPEKVPRAPHDRRREWQKLAQGPELAEDDANLLHKHIEVANGPASHFETRPQTYVDHMDGSYSLSALPFSQMSELLTRAEERVLVRPHEPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPTTALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSPVTVAALAHPPSGLHPTPSTAPGPHVPLMPPSPPSQVIPASEPKRHPSTLPVISDARSVLLEAIRKGIQLRKVEEQREQEAKHERIENDVATILSRRIAVEYSDSEDDSEFDEVDWLE", "length": 559, "header": "tr|A0A4X1V6V5-1|A0A4X1V6V5_PIG Isoform 1 of Wiskott-Aldrich syndrome protein family member OS=Sus scrofa OX=9823 GN=WASF1 PE=3 SV=1 CANONICAL=A0A4X1V6V5-1" }, "locus": { "chromosome": "1", "start_pos": 76131682, "end_pos": 76108311, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055065.2", "url": "https://www.ensembl.org/id/ENSSSCT00000055065.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046107.1", "url": "https://www.ensembl.org/id/ENSSSCP00000046107.1" } ] } }, { "isoform_ac": "F1RSY8-1", "url": "https://www.uniprot.org/uniprotkb/F1RSY8/entry", "sequence": { "sequence": "MPLVKRNIDPRHLCHTALPRGIKNELECVTNISLANIIRQLSSLSKYAEDIFGELFNEAHSFSFRVNSLQERVDRLSVSVTQLDPKEEELSLQDITMRKAFRSSTIQDQQLFDRKTLPIPLQETYDVCEQPPPLNILTPYRDDGKEGLKFYTNPSYFFDLWKEKMLQDTEDKRKEKRKQKQKNLDRPHEPEKVPRAPHDRRREWQKLAQGPELAEDDANLLHKHIEVANGPASHFETRPQTYVDHMDGSYSLSALPFSQMSELLTRAEERVLVRPHEPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPPPLPPPGIRPSSPVTVAALAHPPSGLHPTPSTAPGPHVPLMPPSPPSQVIPASEPKRHPSTLPVISDARSVLLEAIRKGIQLRKVEEQREQEAKHERIENDVATILSRRIAVEYSDSEDDSEFDEVDWLE", "length": 489, "header": "tr|F1RSY8-1|A0A4X1V6V5_PIG Computationally mapped isoform of Wiskott-Aldrich syndrome protein family member OS=Sus scrofa OX=9823 GN=WASF1 PE=3 SV=5 CANONICAL=A0A4X1V6V5-1" }, "locus": { "chromosome": "1", "start_pos": 76131682, "end_pos": 76108311, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004867.5", "url": "https://www.ensembl.org/id/ENSSSCT00000004867.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004752.5", "url": "https://www.ensembl.org/id/ENSSSCP00000004752.5" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 323, "start_aa": "Thr", "end_pos": 323, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr323", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 360, "start_aa": "Thr", "end_pos": 360, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr360", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 458, "start_aa": "Thr", "end_pos": 458, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr458", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1RSY8", "url": "https://www.uniprot.org/uniprotkb/F1RSY8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-2029482", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2029482", "resource": "Reactome", "description": "Regulation of actin dynamics for phagocytic cup formation" }, { "id": "R-SSC-4420097", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-4420097", "resource": "Reactome", "description": "VEGFA-VEGFR2 Pathway" }, { "id": "R-SSC-5663213", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5663213", "resource": "Reactome", "description": "RHO GTPases Activate WASPs and WAVEs" }, { "id": "R-SSC-9013149", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013149", "resource": "Reactome", "description": "RAC1 GTPase cycle" }, { "id": "R-SSC-9013423", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013423", "resource": "Reactome", "description": "RAC3 GTPase cycle" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YG36-1", "protein_name": "Wiskott-Aldrich syndrome protein family member", "gene_name": "WASF1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPLVKRNIDPRHLCHTALPRGIKNELECVTNISLANIIRQLSSLSKYAEDIFGELFNEAHSFSFRVNSLQERVDRLSVSVTQLDPKEEELSLQDITMRKAFRSSTTQDQQLFDRKTLPIPLQETYDICEQPPPLNILTPYRDDGKEGLKFYTNPSYFFDLWKEKMLQDTEDKRKEKRKQKQKNLDRPHEPEKVPRAPHDRRREWQKLAQGPELAEDDANLLHKHIEVANGPASHFESRSQAYVDHMDGSYSLSALPYSQMSELLNRAEERVLVRPHEPPPPPPMHGAGDAKPVPPCVSSTTGLVENRPQSPATGRPPVFVSPTPPPPPPPPLPSALSTSSLRAAMTSTPPPPVPPPPPPPAAALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLAQPSPPVTRAAQVCEAVPVHPVPPQGEVQGLPPPPPPPPLPPPGIRPSSPVTVAALSHPTPVLHPPPTTIVPGPHAPLMPPSPPSQVIPAPEPKRHPSTLPVISDARSVLLEAIRKGIQLRKVEEQREQEAKHERIENDVATILSRRIAVEYSDSEDDSEFDEVDWLE", "length": 562 }, "evidence": [ { "id": "A0A4X1V6V5", "url": "https://omabrowser.org/oma/group/A0A4X1V6V5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3GXM4-1", "protein_name": "Wiskott-Aldrich syndrome protein family member", "gene_name": "Wasf1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MPLVKRNIDPRHLCHTALPRGIKNELECVTNISLANIIRQLSSLSKYAEDIFGELFNEAHSFSFRVNSLQERVDRLSVSVTQLDPKEEELSLQDITMRKAFRSSTIQDQQLFDRKTLPIPLQETYDVCEQPPPLNILTPYRDDGKEGLKFYTNPSYFFDLWKEKMLQDTEDKRKEKRKQKQKNLDRPHEPEKVPRAPHDRRREWQKLAQGPELAEDDADLLHKHIEVANGPASHFETRPQTYVDHMDGSYSLSALPFSQMSELLTRAEERVLVRPHEPPPPPPMHGAGDAKPIPTCISSATGLLETRPQSPAAGRAPVFVSPTPPPPPPPLPSTLSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSPVTVAALAHPPSGLHPTPSTAPGPHVPLMPPSPPSQVIPASEPKRHPSTLPVISDARSVLLEAIRKGIQLRKVEEQREQEAKHERIENDVATILSRRIAVEYSDSEDDSEFDEVDWLE", "length": 559 }, "evidence": [ { "id": "A0A4X1V6V5", "url": "https://omabrowser.org/oma/group/A0A4X1V6V5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q0IIJ3-1", "protein_name": "Actin-binding protein WASF1", "gene_name": "WASF1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPLVKRNIDPRHLCHTALPRGIKNELECVTNISLANIIRQLSSLSKYAEDIFGELFNEAHSFSFRVNSLQERVDRLSVSVTQLDPKEEELSLQDITMRKAFRSSTIQDQQLFDRKTLPIPLQETYDVCEQPPPLNILTPYRDDGKEGLKFYTNPSYFFDLWKEKMLQDTEDKRKEKRKQKQKNLDRPHEPEKVPRAPHDRRREWQKLAQGPELAEDDANLLHKHIEVANGPASHFETRPQTYVDHMDGSYSLSALPFSQMSELLTRAEERVLVRPHEPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPTTALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSPVTVAALAHPPSGLHPTPSTAPGPHVPLMPPSPPSQVTPASEPKRHPSTLPVISDARSVLLEAIRKGIQLRKVEEQREQEAKHERIENDVATILSRRIAVEYSDSEDDSEFDEVDWLE", "length": 559 }, "evidence": [ { "id": "A0A4X1V6V5", "url": "https://omabrowser.org/oma/group/A0A4X1V6V5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q54NF8-1", "protein_name": "Protein SCAR", "gene_name": "scrA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVLITRYLPSVTDNNQPALEGQSKDQIVDTVITSTTVGIINQLTMLVAHSNSIFTALANDANLVTQRIEKLGSRIRPLIQSIPSIEDYHRNTSIDTMNSKPRAEFHADNSERNQHFTHASIPASINTVYEKCKPPPNLQLLDPYMDDGQKSLKLYTNPDFFMDEWVAEQQKLHEEARQRKRERREARLKKKGEKNEVEVKKVKSVTKVRYDPVTGEKITINIESPHTSSPQIQHQSNNTATPQHTTQHFGTNQYQAPPPPPLSQSSPSQQHSPINSYTPPPPPLNTSTPSPSSSFQGRPPSTGFNTPPPPMSNNNNMPPPPPMQQNGGAANNRLSVHNSAPIVAAPAPPPPPPPPSAPAPPPPPMAKAGGGASDIKPKASGARSDLLSSIMQGMALKPAEERKVAEAPKKEEALNVADILARRIAWAGDSDSSEDESDDSDWD", "length": 443 }, "evidence": [ { "id": "A0A4X1V6V5", "url": "https://omabrowser.org/oma/group/A0A4X1V6V5/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q5BJU7-1", "protein_name": "Actin-binding protein WASF1", "gene_name": "Wasf1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPLVKRNIDPRHLCHTALPRGIKNELECVTNISLANIIRQLSSLSKYAEDIFGELFNEAHSFSFRVNSLQERVDRLSVSVTQLDPKEEELSLQDITMRKAFRSSTIQDQQLFDRKTLPIPLQETYDVCEQPPPLNVLTPYRDDGKEGLKFYTNPSYFFDLWKEKMLQDTEDKRKEKRKQKQKNLDRPHEPEKVPRAPHDRRREWQKLAQGPELAEDDADLLHKHIEVANGPASHFETRPQTYVDHMDGSYSLSALPFSQMSELLSRAEERVLVRPHEPPPPPPMHAAGDARPTPTCVSSAAGLIENRPQSPAAGRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPAPALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSPVTVAALAHPPSGLHPTPSPAPGPHAPLMPPSPPSQVLPASEPKRHPSTLPVISDARSVLLEAIRKGIQLRKVEEQREQEAKHERIENDVATILSRRIAVEYSDSEDDSEFDEVDWLE", "length": 559 }, "evidence": [ { "id": "A0A4X1V6V5", "url": "https://omabrowser.org/oma/group/A0A4X1V6V5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8R5H6-1", "protein_name": "Actin-binding protein WASF1", "gene_name": "Wasf1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPLVKRNIDPRHLCHTALPRGIKNELECVTNISLANIIRQLSSLSKYAEDIFGELFNEAHSFSFRVNSLQERVDRLSVSVTQLDPKEEELSLQDITMRKAFRSSTIQDQQLFDRKTLPIPLQETYDVCEQPPPLNILTPYRDDGKEGLKFYTNPSYFFDLWKEKMLQDTEDKRKEKRKQKQKNLDRPHEPEKVPRAPHDRRREWQKLAQGPELAEDDADLLHKHIEVANGPASHYETRPQTYVDHMDGSYSLSALPFSQMSELLTRAEERVLVRPHEPPPPPPMHGAGDAKPTPTCISSATGLIENRPQSPAAGRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSPVAVAALAHPPSGLHPAPSTAPGPHAPLMPPSPPSQVLPASEPKRHPSTLPVISDARSVLLEAIRKGIQLRKVEEQREQEAKHERIENDVATILSRRIAVEYSDSEDDSEFDEVDWLE", "length": 559 }, "evidence": [ { "id": "A0A4X1V6V5", "url": "https://omabrowser.org/oma/group/A0A4X1V6V5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "actin binding", "id": "GO:0003779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003779", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V6V5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V6V5" } ], "pmid": "" }, { "name": "protein kinase A regulatory subunit binding", "id": "GO:0034237", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034237", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V6V5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V6V5" } ], "pmid": "" }, { "name": "Arp2/3 complex binding", "id": "GO:0071933", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071933", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V6V5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V6V5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "cytoskeleton", "id": "GO:0005856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005856", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V6V5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V6V5" } ], "pmid": "" }, { "name": "focal adhesion", "id": "GO:0005925", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005925", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V6V5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V6V5" } ], "pmid": "" }, { "name": "lamellipodium", "id": "GO:0030027", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030027", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V6V5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V6V5" } ], "pmid": "" }, { "name": "synapse", "id": "GO:0045202", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045202", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V6V5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V6V5" } ], "pmid": "" }, { "name": "SCAR complex", "id": "GO:0031209", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031209", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V6V5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V6V5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "actin cytoskeleton organization", "id": "GO:0030036", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030036", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V6V5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V6V5" } ], "pmid": "" }, { "name": "positive regulation of Arp2/3 complex-mediated actin nucleation", "id": "GO:2000601", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000601", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V6V5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V6V5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 31, "end_pos": 33, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1V6V5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V6V5" }, { "id": "PS51082", "database": "PROSITE", "url": 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[], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V7C1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V7C1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100158023", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100158023", "resource": "KEGG Pathway" }, { "id": "R-SSC-5689901", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5689901", "resource": "Reactome", "description": "Metalloprotease DUBs" } ], "orthologs": [ { "uniprot_canonical_ac": "D4A415-1", "protein_name": "Abraxas 2, BRISC complex subunit", "gene_name": "Abraxas2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MMGEVEISIMAASISGYTFSAVCFHSANSNADHEGFLLGEVRQEETFSISDSQISNTEFLQVIEIHNHQPCSKLFSFYDYASKVNEESLDRILKDRRKKVIGWYRFRRNTQQQMSYREQVIHKQLTRVLGVPDLVFLLFSFISTANNSTHALEYVLFRPNRRYNQRISLAIPNLGNTSQQEYKVSSVPNTSQSYAKVIKEHGTDFFDKDGVMKDIRAIYQVYNALQEKVQAVCADVEKSERVVESCQAEVNKLRRQITQKKNEKEQERRLQQALLSRQMPSESLEPAFSPRMPYSGFSAEGRSTLADAEPSDPPPPYSDFHPNNQESTLSHSRIERSVFMPRPQAVGSSNYASTSAGLKFTGSGADLLPSQSAAGDSGEETDDSDYENLIDPAESPHSEYSHSKNSRPTTHPDEDPRNTQTSQI", "length": 424 }, "evidence": [ { "id": "A0A4X1V7C1", "url": 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"Other" ] }, { "id": "A0A4X1V7I9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V7I9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1V7I9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V7I9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDPANESSEGTPFILLGLTADPRQRQPLFVLFLVLYTAGILGNGLIVAAIQVSPALHAPMYFLLAHLSFADLCFTSVTVPKMLANLIAHDRSISLAGCLTQMYFFFAVGVTDSCLLAAMAYDRYMAIRHPLHYAAKMSRAVCTALVGTAWLVSHAHSLLHILLMARLSFCASHRVPHFFCDHQPLLRLSCSDTRHIQLLIFTEGAAVVVTPFLLILASYGAIAAAVLRLPSASGRLRAVSTCGSHLAVVGLFYGTVIAVYFQPTARYEAERGRVATVMYTVITPMLNPVIYSLRNRDVQGALRALFTGRRRISAGDT", "length": 317, "header": "tr|A0A4X1V7I9-1|A0A4X1V7I9_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN=OR1K1 PE=3 SV=1 CANONICAL=A0A4X1V7I9-1" }, "isoforms": [ { "isoform_ac": "A0A4X1V7I9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V7I9/entry", "sequence": { "sequence": 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pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V7I9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V7I9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "E1BPI0-1", "protein_name": "Olfactory receptor", "gene_name": "OR1K1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { 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sensory perception of smell", "id": "GO:0050911", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050911", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V7I9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V7I9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 5, "end_pos": 7, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1V7I9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V7I9" }, { "id": "PS50262", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50262" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "G-protein coupled receptors family 1 profile", "eco_id": "ECO_0000259", "start_pos": 42, "end_pos": 291, "start_aa": "Gly", "end_aa": "Tyr", "glycosite_overlap": [] } ], 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genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1RPU8", "url": "https://www.uniprot.org/uniprotkb/F1RPU8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100154777", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154777", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7JRV3-1", "protein_name": "Mitochondrial pyruvate carrier", "gene_name": "Mpc2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAAAGARGLRASYHRLMDKVELLLPEKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSTVLMATGFIWSRYSLVIIPKNWSLFAVNFFVGSAGASQLFRIWRYNQELKAKGIKSS", "length": 129 }, "evidence": [ { "id": "A0A4X1V8M2", "url": "https://omabrowser.org/oma/group/A0A4X1V8M2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "E1BD64-1", "protein_name": "Mitochondrial pyruvate carrier", "gene_name": "MPC2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSAAGVRGLRATYHRVLDKVELLLPEKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSAVLMATGFIWSRYSLVIIPKNWSLFAVNFFVGTAGASQLFRIWRYNQELKAKANK", "length": 127 }, "evidence": [ { "id": "A0A4X1V8M2", "url": "https://omabrowser.org/oma/group/A0A4X1V8M2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F1NU06-1", "protein_name": "Mitochondrial pyruvate carrier", "gene_name": "MPC2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAAVTGLRASYHRLLDRIELMLPPRFRPFYNHPAGPKTVFFWAPIMKWGLVCAGMADMTRPAEKLSTAQSAVLMATGLIWSRYSLVIIPKNWSLFAVNFFVGCAGGSQLFRIWRYNQELKAKQQEQLLQKDA", "length": 133 }, "evidence": [ { "id": "A0A4X1V8M2", "url": "https://omabrowser.org/oma/group/A0A4X1V8M2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "O49636-1", "protein_name": "Mitochondrial pyruvate carrier 4", "gene_name": "MPC4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATSKLQAIWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIWSRYSMVINPKNWNLFSVNVAMAGTGIYQLARKIKHDYATEAEPAVASE", "length": 108 }, "evidence": [ { "id": "A0A4X1V8M2", "url": "https://omabrowser.org/oma/group/A0A4X1V8M2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O95563-1", "protein_name": "Mitochondrial pyruvate carrier 2", "gene_name": "MPC2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSAAGARGLRATYHRLLDKVELMLPEKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSAVLMATGFIWSRYSLVIIPKNWSLFAVNFFVGAAGASQLFRIWRYNQELKAKAHK", "length": 127 }, "evidence": [ { "id": "A0A4X1V8M2", "url": "https://omabrowser.org/oma/group/A0A4X1V8M2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P38718-1", "protein_name": "Mitochondrial pyruvate carrier 2", "gene_name": "Mpc2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAAGARGLRATYHRLMDKVELLLPKKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSTVLMATGFIWSRYSLVIIPKNWSLFAVNFFVGSAGASQLFRIWKYNQELKSKGIQ", "length": 127 }, "evidence": [ { "id": "A0A4X1V8M2", "url": "https://omabrowser.org/oma/group/A0A4X1V8M2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P53311-1", "protein_name": "Mitochondrial pyruvate carrier 3", "gene_name": "MPC3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSASAFNFAFRRFWNSETGPKTVHFWAPTLKWGLVFAGLNDIKRPVEKVSGAQNLSLLATALIWTRWSFVIKPKNYLLASVNFFLGCTAGYHLTRIANFRIRNGDSFKQVIHYIIKGETPAAVAAKQTASTSMNKGVIGTNPPITH", "length": 146 }, "evidence": [ { "id": "A0A4X1V8M2", "url": "https://omabrowser.org/oma/group/A0A4X1V8M2/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q9D023-1", "protein_name": "Mitochondrial pyruvate carrier 2", "gene_name": "Mpc2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAGARGLRATYHRLMDKVELLLPKKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSTVLMATGFIWSRYSLVIIPKNWSLFAVNFFVGSAGASQLFRIWRYNQELKSKGIQ", "length": 127 }, "evidence": [ { "id": "A0A4X1V8M2", "url": "https://omabrowser.org/oma/group/A0A4X1V8M2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9VHB1-1", "protein_name": "Mitochondrial pyruvate carrier", "gene_name": "Mpc2a", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSSTAVQPPPPVPPPPPSAVPSAGKGIHSKLYNGMIGAADKFVPAKLRPLWMHPAGPKTIFFWAPVFKWGLVAAGLSDLARPADTISVSGCAALAATGIIWSRYSLVIIPKNYSLFAVNLFVGITQVVQLARAYHYHQSQEKLKQEQQQPAVQN", "length": 154 }, "evidence": [ { "id": "A0A4X1V8M2", "url": "https://omabrowser.org/oma/group/A0A4X1V8M2/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "mitochondrial inner membrane", "id": "GO:0005743", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005743", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V8M2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V8M2" } ], "pmid": "" }, { "name": "mitochondrial pyruvate carrier complex", "id": 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"UniProtKB", "id": "A0A4X1V8M2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V8M2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 93, "end_pos": 95, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 93, "end_pos": 95 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"A0A4X1V8N9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V8N9/entry#names_and_taxonomy" } ] }, { "name": "CTD small phosphatase-like protein 2 isoform X3", "type": "synonym", "evidence": [ { "id": "XP_020952194", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020952194" } ] }, { "name": "Small C-terminal domain phosphatase 4", "type": "synonym", "evidence": [ { "id": "A0A4X1V8N9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V8N9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V8N9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V8N9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CTDSPL2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V8N9", "locus": { "chromosome": "1", "start_pos": 127028887, "end_pos": 127125392, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000035827", "url": "https://www.ensembl.org/id/ENSSSCG00000035827" } ] } } ], "crossref": [ { "id": "A0A4X1V8N9", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1V8N9", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd07521", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07521", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "102162809", "url": "https://www.ncbi.nlm.nih.gov/gene/102162809", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004274", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004274", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011948", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011948", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023214", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023214", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036412", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036412", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050365", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050365", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR12210", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12210", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03031", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03031", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020952194", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020952194", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "20629", "url": "https://www.rhea-db.org/rhea/20629", "database": 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phosphatase-like protein 2 OS=Sus scrofa OX=9823 GN=CTDSPL2 PE=3 SV=1 CANONICAL=A0A4X1V8N9-1" }, "isoforms": [ { "isoform_ac": "A0A4X1V8N9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V8N9/entry", "sequence": { "sequence": "MRLRTRKASQQSNQIQTQRTARAKRKYSEVDDSLPSGGEKPPKNETGLLSSIKKFIKGSTPKEERENPSKRSKIERDIDNNLITSTPRAGEKPNKQISRVRRKSQVNGEAGSYEMTNQHVKQNGKLEDNPSSGSPPRTTLLGTIFSPVFNFFSPANKNGTSGSDSPGQAVEAEEIVKQLDMEQVDEITTSTTTSTNGAAYSSQAVQVRPSINNGLEEAEETVNRDIPPLTAPVTPDSGYSSAHAEATYEEDWEVFDPYYFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDNELLKLIPFLEKLVELNEDVRPHIRDRFRLHDLLPPD", "length": 437, "header": "tr|A0A4X1V8N9-1|A0A4X1V8N9_PIG Isoform 1 of CTD small phosphatase-like protein 2 OS=Sus scrofa OX=9823 GN=CTDSPL2 PE=3 SV=1 CANONICAL=A0A4X1V8N9-1" }, "locus": { "chromosome": "1", "start_pos": 127090809, "end_pos": 127033860, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": 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"tr|A0A4X1V9C5-1|A0A4X1V9C5_PIG Isoform 1 of Protein SGT1 homolog OS=Sus scrofa OX=9823 GN=SUGT1 PE=1 SV=1 CANONICAL=A0A4X1V9C5-1" }, "locus": { "chromosome": "11", "start_pos": 25948585, "end_pos": 25906111, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052286.2", "url": "https://www.ensembl.org/id/ENSSSCT00000052286.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033807.1", "url": "https://www.ensembl.org/id/ENSSSCP00000033807.1" } ] } }, { "isoform_ac": "A0A4X1VCZ2-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VCZ2/entry", "sequence": { "sequence": "MAAAAAGPATAQRFFRSFSDALIEEDPQAALEELSKALEQKPDDAQYYCQRAYCHILLGNYHDAVADAKKSLELNPNGSTAMLRKGICEYHEKNYAAALETFTEGQKLDSADTDFIVWIKRCEEAQNGKCAFPVVFKFKKKYDWYQTESQVIITLMIKNVQKNDVNVEFSEKELSALVKLPSGDDYNLKLRLLHPIIPEQSTFKVLSTKIEIKMKKPEAVRWEKLEGQGDVPNPKQFIADVKNLYPSSSHYTRNWDKLVGEIKEEEKNEKLEGDAALNKLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDDMEWKKY", "length": 333, "header": "tr|A0A4X1VCZ2-1|A0A4X1V9C5_PIG Computationally mapped isoform of Protein SGT1 homolog OS=Sus scrofa OX=9823 GN=SUGT1 PE=1 SV=1 CANONICAL=A0A4X1V9C5-1" }, "locus": { "chromosome": "11", "start_pos": 25948585, "end_pos": 25906111, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084743.1", "url": "https://www.ensembl.org/id/ENSSSCT00000084743.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059711.1", "url": "https://www.ensembl.org/id/ENSSSCP00000059711.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VCZ2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VCZ2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100736854", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100736854", "resource": "KEGG Pathway" }, { "id": "R-SSC-844456", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-844456", "resource": "Reactome", "description": "The NLRP3 inflammasome" } ], "orthologs": [ { "uniprot_canonical_ac": "B0BN85-1", "protein_name": "Protein SGT1 homolog", "gene_name": "Sugt1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAAAAGPASSQRFFQSFPDALIDGDPQAALEELTKALEQNPDDAQYYCQRAYCHILLGKYCDGIADVKKSLELNPNNSTALLRKGICEYYEKDYASALETFAEGQKLDGTDTNFDIWIKRCQEIQNGSEPEVSASQRTQSKIKYDWYQTESHVIITLMIKNVQKNDVRVDFSEKELSAVVKIPSGEDCSLKLRLLHPIIPEQSTFKVLSTKIEIKMKKPEAVRWEKLEGQGDVPAPKQFTADVKNMYPSSSHYTRNWDKLVGEIKEEEKNEKLEGDAALNKLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDDMEWKQY", "length": 336 }, "evidence": [ { "id": "A0A4X1V9C5", "url": "https://omabrowser.org/oma/group/A0A4X1V9C5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1NAS0-1", "protein_name": "SGT1 homolog, MIS12 kinetochore complex assembly cochaperone", "gene_name": "SUGT1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAAAEAAARFSDADIDRDPTAAARELTRALEKSPDDAEYYCQRAYAHILLQNYTDAVADAKKSLELNPSNAVALLRKGLGEYHIKNYASALESFKEGQKLDNVDDTFTVWIKRCEEMLNGSQTEVQQPLSAKIKYDWYQTESHVIVTVMIKNAQKDGVRVQFSEKEMNASVRLPSGEDYNLKLVLLHSIVPEQSTFKVLSTKVEIKMKKPEAVRWEKLEGEGDSLKLKQFIPDTQHLYPSSSHYTRNWDKLVVEIKEEEKNEKLEGDAALNKLFQQIYSDGTDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEVNPPDDMEWKKY", "length": 327 }, "evidence": [ { "id": "A0A4X1V9C5", "url": "https://omabrowser.org/oma/group/A0A4X1V9C5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q2KIK0-1", "protein_name": "Protein SGT1 homolog", "gene_name": "SUGT1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAAAAAGPVAAASRLFRSFSDALIEQDPQAALEELTKALEQKPDDAPYYCQRAYCHILLGNYSDAVADAKKSLELNPNSSTALLRKGICEYHEKNYAAALETFTEGQKLNSADADLTAWIKRCQEAQNGSQPEVSASQRTHQSKIKYDWYQTESQVIITLMIKNVQKNDVNVEFSEKELSALVKLPSGDDYSLKLRLLHPIIPEQSTFKVLSTKIEIKMKKPEAVRWEKLEGQGDVPNPKPFIADVKNLYPSSSHYTRNWDKLVGEIKEEEKNEKLEGDAALNKLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDDMEWKKY", "length": 338 }, "evidence": [ { "id": "A0A4X1V9C5", "url": "https://omabrowser.org/oma/group/A0A4X1V9C5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q55ED0-1", "protein_name": "Protein SGT1 homolog", "gene_name": "sugt1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEQLKEGNSYFVDEQYDEALKCYDKACLELSNNAEAFFKRSQCHSKLSNLKEALSDINTSIKLDSNNSKYYLKKGQLCFELEEFDTALKTFEKGQSIDSENSSFKTWIRKSKAEIQSNPTTTTTTTPTPTPTPTPAPQPVTTTTNPTPIPTTSNTTTTTNNNNNNNNNNNNNNNNNNTTTDSTTTKLPIPSSGNKVRHEWYQTETHVVLTIFAKFVTASNSKINLTSKSVNISFPLANGSEFLFEMDLFDPIVDKDSTIHYYSTKVEIKMKKSRAIKWDTLEFTDKSGPVGLMDQISSSPAVPSPYASKKDWDKLPNEPEEKLEGDQALNKIFRDIFSKGSEDQQRAMMKSFTESGGTVLSTNWDEVGSKKVVGEPPKGLEFKQYEK", "length": 387 }, "evidence": [ { "id": "A0A4X1V9C5", "url": "https://omabrowser.org/oma/group/A0A4X1V9C5/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9CX34-1", "protein_name": "Protein SGT1 homolog", "gene_name": "Sugt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAAAGPASSQRLFQSFSDALIDGDPQAALEELTKALEQNPDDAQYYCQRAYCHILLGKYRDGIADVKKSLELNPNNCTALLRKGICEYHEKDYASALETFAEGQKLDSTDTNFDTWIKRCQEIQNGSESEVSASQRTQSKIKYDWYQTESHVIITLMIKSVQKNDVRVGFSERELSALVKIPAGEDYSLKLRLLHPIIPEQSTFKVLSTKIEIKMKKPEAVRWEKLEGQGDEPTPKQFTADVKNMYPSSSHYTRNWDKLVGEIKEEEKNEKLEGDAALNKLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDDMEWKQY", "length": 336 }, "evidence": [ { "id": "A0A4X1V9C5", "url": "https://omabrowser.org/oma/group/A0A4X1V9C5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9SUT5-1", "protein_name": "Protein SGT1 homolog B", "gene_name": "SGT1B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAKELAEKAKEAFLDDDFDVAVDLYSKAIDLDPNCAAFFADRAQANIKIDNFTEAVVDANKAIELEPTLAKAYLRKGTACMKLEEYSTAKAALEKGASVAPNEPKFKKMIDECDLRIAEEEKDLVQPMPPSLPSSSTTPLATEADAPPVPIPAAPAKPMFRHEFYQKPEEAVVTIFAKKVPKENVTVEFGEQILSVVIDVAGEEAYHLQPRLFGKIIPEKCRFEVLSTKVEIRLAKAEIITWASLEYGKGQSVLPKPNVSSALSQRPVYPSSKPAKDWDKLEAEVKKQEKDEKLDGDAAMNKFFSDIYSSADEDMRRAMNKSFAESNGTVLSTNWKEVGTKKVESTPPDGMELKKWEY", "length": 358 }, "evidence": [ { "id": "A0A4X1V9C5", "url": "https://omabrowser.org/oma/group/A0A4X1V9C5/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9Y2Z0-1", "protein_name": "Protein SGT1 homolog", "gene_name": "SUGT1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAAAAGTATSQRFFQSFSDALIDEDPQAALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKGICEYHEKNYAAALETFTEGQKLDIETGFHRVGQAGLQLLTSSDPPALDSQSAGITGADANFSVWIKRCQEAQNGSESEVWTHQSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPEAVRWEKLEGQGDVPTPKQFVADVKNLYPSSSPYTRNWDKLVGEIKEEEKNEKLEGDAALNRLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDDMEWKKY", "length": 365 }, "evidence": [ { "id": "A0A4X1V9C5", "url": "https://omabrowser.org/oma/group/A0A4X1V9C5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "kinetochore assembly", "id": "GO:0051382", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051382", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V9C5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V9C5" } ], "pmid": "" }, { "name": "regulation of protein stability", "id": "GO:0031647", "url": 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"start_pos": 301, "end_pos": 303 }, { "start_pos": 315, "end_pos": 317 }, { "start_pos": 77, "end_pos": 79 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", 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"sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1VAI9-1", "uniprot_ac": "A0A4X1VAI9", "uniprot_id": "A0A4X1VAI9_PIG", "mass": { "chemical_mass": 16034.0, "monoisotopic_mass": 16034.0 }, "refseq": { "ac": "XP_003128357", "name": "lymphocyte antigen 6 complex locus protein G5c", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003128357" }, "gene_names": [ { "name": "LY6G5C", "type": "recommended", "evidence": [ { "id": "A0A4X1VAI9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VAI9" } ] }, { "name": "LY6G5C", "type": "synonym", "evidence": [ { "id": "XP_003128357", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003128357" } ] } ], "protein_names": [ { "name": "Lymphocyte antigen 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K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VAW2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VAW2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100623744", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623744", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "G protein-coupled receptor activity", "id": "GO:0004930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004930", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VAW2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VAW2" } ], "pmid": "" }, { "name": "olfactory receptor activity", "id": 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"authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1VBD7-1", "uniprot_ac": "A0A4X1VBD7", "uniprot_id": "A0A4X1VBD7_PIG", "mass": { "chemical_mass": 24637.0, "monoisotopic_mass": 24637.0 }, "refseq": { "ac": "NP_001230501", "name": "coiled-coil domain-containing protein 25", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230501" }, "gene_names": [ { "name": "CCDC25", "type": "recommended", "evidence": [ { "id": "A0A4X1VBD7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VBD7" } ] }, { "name": "CCDC25", "type": "synonym", "evidence": [ { "id": "NP_001230501", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230501" } ] } ], "protein_names": [ { "name": "Coiled-coil domain-containing protein 25", "type": "recommended", "evidence": [ { "id": "A0A4X1VBD7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VBD7/entry#names_and_taxonomy" } ] }, { "name": "coiled-coil domain-containing protein 25", "type": "synonym", "evidence": [ { "id": "NP_001230501", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230501" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VBD7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VBD7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CCDC25", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VBD7", "locus": { "chromosome": "14", "start_pos": 11455957, "end_pos": 11495075, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024972", "url": "https://www.ensembl.org/id/ENSSSCG00000024972" } ] } } ], "crossref": [ { "id": "A0A4X1VBD7", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VBD7", "database": "AlphaFoldDB", "categories": [] }, { "id": "100627354", "url": "https://www.ncbi.nlm.nih.gov/gene/100627354", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR008532", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008532", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039730", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039730", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100627354", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627354", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YHDEKAV", "url": "https://omabrowser.org/oma/group/YHDEKAV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VBD7", "url": "https://www.orthodb.org/?gene=A0A4X1VBD7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13049", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13049", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13049:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13049:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05670", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05670", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001230501", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230501", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VBD7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VBD7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VBD7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VBD7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F801", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F801", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F801-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F801-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLHKGEKIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRLEKTKMERFPDLEAEKECRDREERNEKKAQIQEMKRREKEEMKKKREMDELRSYSSLMKVENMSSNQDGNDSDEFM", "length": 208, "header": "tr|A0A4X1VBD7-1|A0A4X1VBD7_PIG Isoform 1 of Coiled-coil domain-containing protein 25 OS=Sus scrofa OX=9823 GN=CCDC25 PE=3 SV=1 CANONICAL=A0A4X1VBD7-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VBD7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VBD7/entry", "sequence": { "sequence": "MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLHKGEKIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRLEKTKMERFPDLEAEKECRDREERNEKKAQIQEMKRREKEEMKKKREMDELRSYSSLMKVENMSSNQDGNDSDEFM", "length": 208, "header": "tr|A0A4X1VBD7-1|A0A4X1VBD7_PIG Isoform 1 of Coiled-coil domain-containing protein 25 OS=Sus scrofa OX=9823 GN=CCDC25 PE=3 SV=1 CANONICAL=A0A4X1VBD7-1" }, "locus": { "chromosome": "14", "start_pos": 11494999, "end_pos": 11459678, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062586.2", "url": "https://www.ensembl.org/id/ENSSSCT00000062586.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036620.1", "url": "https://www.ensembl.org/id/ENSSSCP00000036620.1" } ] } }, { "isoform_ac": "A0A8W4F801-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F801/entry", "sequence": { "sequence": "MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLHKGEKIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRLEKTKMERFPDLEAEKECRDREERNEKKAQIQEMKRREKEEFRDSFDFIYIPSHKKKKNQPPTKILPS", "length": 200, "header": "tr|A0A8W4F801-1|A0A4X1VBD7_PIG Computationally mapped isoform of Coiled-coil domain-containing protein 25 OS=Sus scrofa OX=9823 GN=CCDC25 PE=3 SV=1 CANONICAL=A0A4X1VBD7-1" }, "locus": { "chromosome": "14", "start_pos": 11494999, "end_pos": 11459564, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000101545.1", "url": "https://www.ensembl.org/id/ENSSSCT00000101545.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075474.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075474.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4F801", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F801" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100627354", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627354", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2M417-1", "protein_name": "Coiled-coil domain-containing protein 25", "gene_name": "Ccdc25", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MVFYFTSSSVNSSTYTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLQKGEKIEDIPKEVLMDCAHLVKANSIQGCKMNNINVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRLEKTKLEKFPDLAAEKESRDREERNEKKAQIQEMKRREKEEMKKKREMDELRSYSSLMKVENMSSNQDGNDSDEFM", "length": 208 }, "evidence": [ { "id": "A0A4X1VBD7", "url": "https://omabrowser.org/oma/group/A0A4X1VBD7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "D4AAU6-1", "protein_name": "Coiled-coil domain-containing protein 25", "gene_name": "Ccdc25", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVFYFTSSSVNSSTYTIYMGKDKYENEDLIKYGWPEDVWFHVDKLSSAHVYLRLQKGEKIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRLEKTKLEKFPDLAAEKEGRDREERNEKKAQIQEMKRKEKEEMKKKREMDELRSYSSLMKVENMSSNQDGNDSDEFM", "length": 208 }, "evidence": [ { "id": "A0A4X1VBD7", "url": "https://omabrowser.org/oma/group/A0A4X1VBD7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P40206-1", "protein_name": "Protein JLP2", "gene_name": "JLP2", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MVYFYESKPTEYSTPYQIVMGKDKFENDLLIKWSYRELNYVWFHADKYSSGHVYLKLRPNEKTIDDIPQEVICDCLQLCKSESIQGNKMPQCTILITPWHNLRKNRYMNPGEVSFKSLRQCRKMECGARDNKILNRLAKTRVELFNNVEATLNEAKKTKNGDFFVNYIESNRSNLIEEEKLRKVAKKNQKKKNKQSKDEVTDDMQLEV", "length": 208 }, "evidence": [ { "id": "A0A4X1VBD7", "url": "https://omabrowser.org/oma/group/A0A4X1VBD7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q3SZX8-1", "protein_name": "Coiled-coil domain-containing protein 25", "gene_name": "CCDC25", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLHKGEKIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRLEKTKMERFPDLEAEKECRDHEERNEKKAQIQEMKRREKEEMKKKREMDELRSYSSLMKVENMSSNQDGNDSDEFM", "length": 208 }, "evidence": [ { "id": "A0A4X1VBD7", "url": "https://omabrowser.org/oma/group/A0A4X1VBD7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q55D55-1", "protein_name": "Coiled-coil domain-containing protein 25 homolog", "gene_name": "ccdc25", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVLYFKLIDPEYICYMGIDKFENEDLIKYGWPEDVWFHVNDLSSAHVYLRLRKGETWNDIPANILEECCQLVKQNSIQGCKEASVDIVYTPWANLKKTAGMEAGQVLYHNEREVKYVRNVRKDSKIINRIEKTREKREVDLMHERDSRDKSERHEKRKEQEEKRRAEKKAYEEKQKMEDIKKYTSIMKTDNMKFNKYNPTDEDDFM", "length": 206 }, "evidence": [ { "id": "A0A4X1VBD7", "url": "https://omabrowser.org/oma/group/A0A4X1VBD7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q78PG9-1", "protein_name": "Coiled-coil domain-containing protein 25", "gene_name": "Ccdc25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVFYFTSSSVNSSTYTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLQKGEKIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRLEKTKLEKFPDLAAEKEGRDREERNEKKAQIQEMKRKEKEEMKKKREMDELRSYSSLMKVENMSSNQDGNDSDEFM", "length": 208 }, "evidence": [ { "id": "A0A4X1VBD7", "url": "https://omabrowser.org/oma/group/A0A4X1VBD7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7T312-1", "protein_name": "Coiled-coil domain-containing protein 25", "gene_name": "ccdc25", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVFYFTSAVVSPPHTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRMPKGTTIDDIPKEVLIDCVQLVKNNSIQGCKMNNINIVYTPWSNLKKTADMDIGQIGFHRQKEVKIVAVEKKINEIVNRLEKTKEERYPDLAAEKESRDREERNEKKAQIQEQKKKEKEEVKKKKEMEDLKNYTSLMKSDNMTTNEDGYDSDDFM", "length": 207 }, "evidence": [ { "id": "A0A4X1VBD7", "url": "https://omabrowser.org/oma/group/A0A4X1VBD7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q86WR0-1", "protein_name": "Coiled-coil domain-containing protein 25", "gene_name": "CCDC25", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKHGWPEDIWFHVDKLSSAHVYLRLHKGENIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRLEKTKVERFPDLAAEKECRDREERNEKKAQIQEMKKREKEEMKKKREMDELRSYSSLMKVENMSSNQDGNDSDEFM", "length": 208 }, "evidence": [ { "id": "A0A4X1VBD7", "url": "https://omabrowser.org/oma/group/A0A4X1VBD7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9LYE1-1", "protein_name": "Coiled-coil protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVFYFKARPDAGDYTIFMGLDKFENEELIKYGFPEDVWFHVDKMSSAHVYLRLHRGQSFDDISEGVLEDCAQLVKANSIQGNKVNNVDVVYTPWSNLKKTASMDVGQVGFHNSKMVRTIRVEKRVNEIVNRLNKTKVERTPDLRAEREAVNAAERAERKQHLREKKKREEIDRLEKERQSEMRSYKGLMVTDKMTSNKDIASSNKSLQELEDDFM", "length": 215 }, "evidence": [ { "id": "A0A4X1VBD7", "url": "https://omabrowser.org/oma/group/A0A4X1VBD7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9W3T2-1", "protein_name": "Coiled-coil domain-containing protein 25", "gene_name": "Dmel\\CG4593", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MVFYFKSNVVQPPAMLYMGRDKHENEELIRWGWPEDVWFHVHDLSSAHVYLRLRKGQTIDDIPTDVLVDAAQLCKANSIQGNKVNNLEVVYTMWENLKKTPDMEPGQVAYHNEKAVRRIRLEKRINEIVNRLNRTKTEEEHPDFRGLREARDAAERQDQKKIQRERREQEKEAAKQRELEAELRSYASLQKSENMRTNYDAGNESDDFM", "length": 209 }, "evidence": [ { "id": "A0A4X1VBD7", "url": "https://omabrowser.org/oma/group/A0A4X1VBD7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VBD7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VBD7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VBD7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VBD7" } ], "pmid": "" }, { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VBD7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VBD7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "positive regulation of cell motility", "id": "GO:2000147", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000147", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VBD7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VBD7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 11, "end_pos": 13, "annotation": "n_glycosylation_sequon" }, { "start_pos": 194, "end_pos": 196, "annotation": "n_glycosylation_sequon" }, { "start_pos": 202, "end_pos": 204, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1VBD7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VBD7" }, { "id": "PF05670", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05670" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "NFACT RNA-binding", "eco_id": "ECO_0000259", "start_pos": 1, "end_pos": 112, "start_aa": "Met", "end_aa": "His", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 11, "end_pos": 13 }, { "start_pos": 194, "end_pos": 196 }, { "start_pos": 202, "end_pos": 204 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1VD84-1", "uniprot_ac": "A0A4X1VD84", "uniprot_id": "A0A4X1VD84_PIG", "mass": { "chemical_mass": 11108.0, "monoisotopic_mass": 11108.0 }, "refseq": { "ac": "XP_003133626", "name": "NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003133626" }, "gene_names": [ { "name": "NDUFB3", "type": "recommended", "evidence": [ { "id": "A0A4X1VD84", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VD84" } ] }, { "name": "NDUFB3", "type": "synonym", "evidence": [ { "id": "XP_003133626", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003133626" } ] } ], "protein_names": [ { "name": "NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3", "type": "recommended", "evidence": [ { "id": "A0A4X1VD84", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VD84/entry#names_and_taxonomy" } ] }, { "name": "Complex I-B12", "type": "synonym", "evidence": [ { "id": "A0A4X1VD84", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VD84/entry#names_and_taxonomy" } ] }, { "name": "NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_003133626", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003133626" } ] }, { "name": "NADH-ubiquinone oxidoreductase B12 subunit", "type": "synonym", "evidence": [ { "id": "A0A4X1VD84", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VD84/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VBN1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VBN1#function" }, { "database": "UniProtKB", "id": "ARBA00003195", "url": "https://www.uniprot.org/uniprotkb/ARBA00003195#function" }, { "database": "UniProtKB", "id": "A0A4X1VD84", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VD84#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VD84", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VD84" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NDUFB3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VD84", "locus": {} } ], "crossref": [ { "id": "A0A4X1VD84", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VD84", "database": "AlphaFoldDB", "categories": [] }, { "id": "100525083", "url": "https://www.ncbi.nlm.nih.gov/gene/100525083", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "5GUP", "url": "https://www.ncbi.nlm.nih.gov/Structure/icn3d/?mmdbid=5GUP&bu=0", "database": "iCn3D", "categories": [ "3D Structure" ] }, { "id": "7V2C", "url": "https://www.ncbi.nlm.nih.gov/Structure/icn3d/?mmdbid=7V2C&bu=0", "database": "iCn3D", "categories": [ "3D Structure" ] }, { "id": "7V2D", "url": "https://www.ncbi.nlm.nih.gov/Structure/icn3d/?mmdbid=7V2D&bu=0", "database": "iCn3D", "categories": [ "3D Structure" ] }, { "id": "7V2E", "url": "https://www.ncbi.nlm.nih.gov/Structure/icn3d/?mmdbid=7V2E&bu=0", "database": "iCn3D", "categories": [ "3D Structure" ] }, { "id": "7V2F", "url": "https://www.ncbi.nlm.nih.gov/Structure/icn3d/?mmdbid=7V2F&bu=0", "database": "iCn3D", "categories": [ "3D Structure" ] }, { "id": "7V2H", "url": 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Its inhibitory activity on translation is mediated via its action on PABPC1. Displaces the interaction of PABPC1 with poly(A) RNA and competes with PAIP1 for binding to PABPC1. 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"-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000026606", "url": "https://www.ensembl.org/id/ENSSSCG00000026606" } ] } } ], "crossref": [ { "id": "A0A4X1VBZ4", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VBZ4", "database": "AlphaFoldDB", "categories": [] }, { "id": "100522309", "url": "https://www.ncbi.nlm.nih.gov/gene/100522309", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR009818", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009818", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040396", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040396", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100522309", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522309", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PGIQKHN", "url": "https://omabrowser.org/oma/group/PGIQKHN/", "database": "OMA", "categories": [ "Protein 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"https://www.uniprot.org/uniprotkb/A0A4X1VBZ4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0SZD0", "url": "https://www.uniprot.org/uniprotkb/A0A8D0SZD0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0SZD0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0SZD0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKDPSRSSTSPSIINEDVIINGHSHEDDNPFAEYMWMENEEEFNRQIEEELWEEEFIERCFQEMLEEEEEHEWFIPARDLPQTMDQIQDQFNDLVISDGSSLEDLVVKSNLNPNAKEFVPGVKY", "length": 124, "header": "tr|A0A4X1VBZ4-1|A0A4X1VBZ4_PIG Isoform 1 of Polyadenylate-binding protein-interacting protein 2 OS=Sus scrofa OX=9823 GN=PAIP2 PE=3 SV=1 CANONICAL=A0A4X1VBZ4-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VBZ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VBZ4/entry", "sequence": { "sequence": "MKDPSRSSTSPSIINEDVIINGHSHEDDNPFAEYMWMENEEEFNRQIEEELWEEEFIERCFQEMLEEEEEHEWFIPARDLPQTMDQIQDQFNDLVISDGSSLEDLVVKSNLNPNAKEFVPGVKY", "length": 124, "header": "tr|A0A4X1VBZ4-1|A0A4X1VBZ4_PIG Isoform 1 of Polyadenylate-binding protein-interacting protein 2 OS=Sus scrofa OX=9823 GN=PAIP2 PE=3 SV=1 CANONICAL=A0A4X1VBZ4-1" }, "locus": { "chromosome": "2", "start_pos": 141259253, "end_pos": 141254440, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031093.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031093.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021401.3", "url": "https://www.ensembl.org/id/ENSSSCP00000021401.3" } ] } }, { "isoform_ac": "A0A8D0SZD0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0SZD0/entry", "sequence": { "sequence": "MKDPSRSSTSPSIINEDVIINGHSHEDDNPFAEYMWMENEEEFNRQVKSNLNPNAKEFVPGVKY", "length": 64, "header": "tr|A0A8D0SZD0-1|A0A4X1VBZ4_PIG Computationally mapped isoform of Polyadenylate-binding protein-interacting protein 2 OS=Sus scrofa OX=9823 GN=PAIP2 PE=3 SV=1 CANONICAL=A0A4X1VBZ4-1" }, "locus": { "chromosome": "2", "start_pos": 141259253, "end_pos": 141254440, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040716.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040716.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000039003.1", "url": "https://www.ensembl.org/id/ENSSSCP00000039003.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D0SZD0", "url": "https://www.uniprot.org/uniprotkb/A0A8D0SZD0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100522309", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522309", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2LKF4-1", "protein_name": "Polyadenylate-binding protein-interacting protein 2", "gene_name": "Paip2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKDPSRSSTSPSIINEDVIINGHSHEDDNPFAEYMWMENEEEFNRQIEEELWEEEFIERCFQEMLEEEEEHEWFIPARDLPQTMDQIQDQFNDLVISDGSSLEDLVVKSNLNPNAKEFVPGVKY", "length": 124 }, "evidence": [ { "id": "A0A4X1VBZ4", "url": "https://omabrowser.org/oma/group/A0A4X1VBZ4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q3ZC67-1", "protein_name": "Polyadenylate-binding protein-interacting protein 2", "gene_name": "PAIP2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKDPSRSSTSPSIINEDVIINGHSHEDDNPFAEYMWMENEEEFNRQIEEELWEEEFIERCFQEMLEEEEEHEWFIPARDLPQTMDQIQDQFNDLVISDGSSLEDLVVKSNLNPNAKEFVPGVKY", "length": 124 }, "evidence": [ { "id": "A0A4X1VBZ4", "url": "https://omabrowser.org/oma/group/A0A4X1VBZ4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5ZJS6-1", "protein_name": "Polyadenylate-binding protein-interacting protein 2", "gene_name": "PAIP2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKDPSRSSTSPSIISEDVIINGHSHEDDNPFAEYMWMENEEEFNRQIEEELWEEEFIERCFQEMLEEEEEHEWFIPARDLPQTMDQIQDQFNDLVISDSSSLEDLVVKSNLNPNAKEFVPGVKYLNI", "length": 127 }, "evidence": [ { "id": "A0A4X1VBZ4", "url": "https://omabrowser.org/oma/group/A0A4X1VBZ4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q6AXZ0-1", "protein_name": "Polyadenylate-binding protein-interacting protein 2", "gene_name": "Paip2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKDPSRSSTSPSIINDDVIINGHSHEEDNPFAEYMWMENEEEFNRQIEEELWEEEFIERCFQEMLEEEEEHEWFIPARDLPQTMDQIQDQFNDLVISDGSSLEDLVVKSNLNPNAKEFVPGVKY", "length": 124 }, "evidence": [ { "id": "A0A4X1VBZ4", "url": "https://omabrowser.org/oma/group/A0A4X1VBZ4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9BPZ3-1", "protein_name": "Polyadenylate-binding protein-interacting protein 2", "gene_name": "PAIP2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKDPSRSSTSPSIINEDVIINGHSHEDDNPFAEYMWMENEEEFNRQIEEELWEEEFIERCFQEMLEEEEEHEWFIPARDLPQTMDQIQDQFNDLVISDGSSLEDLVVKSNLNPNAKEFVPGVKYGNI", "length": 127 }, "evidence": [ { "id": "A0A4X1VBZ4", "url": "https://omabrowser.org/oma/group/A0A4X1VBZ4/", "database": "OMA" } ], "glygen_name": 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CANONICAL=A0A4X1VC33-1" }, "locus": { "chromosome": "1", "start_pos": 76676103, "end_pos": 76675741, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004859.3", "url": "https://www.ensembl.org/id/ENSSSCT00000004859.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045273.1", "url": "https://www.ensembl.org/id/ENSSSCP00000045273.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VC33", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VC33" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "autophagosome maturation", "id": "GO:0097352", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097352", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VC33", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VC33" } ], "pmid": "" }, { "name": "autophagosome assembly", "id": "GO:0000045", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000045", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VC33", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VC33" } ], "pmid": "" }, { "name": 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"ENSSSCG00000031077", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000031077", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100620632", "url": "https://www.ncbi.nlm.nih.gov/gene/100620632", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000225", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000225", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002652", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002652", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011989", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011989", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR024931", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024931", "database": "InterPro", "categories": [ 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"MADSEKLDNQRLKNFKNKGRDLETMRRQRNEVVVELRKNKRDEHLLKRRNVPHEDICEDSDIDGDYRVQNTSLEAIVQNASSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNILVDTVWALSYLTDAGNEQIQMVIDSGIVPHLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAVIDANLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLDGLSNILKMAEDEAETIANLIEECGGLEKIEQLQNHENEDIYKLAYEIIDQFFSSDDIDEDPSLVPEAIQGGTFGFNSSANVPTEGFQF", "length": 521, "header": "tr|A0A4X1VC39-1|A0A4X1VC39_PIG Isoform 1 of Importin subunit alpha OS=Sus scrofa OX=9823 GN=KPNA4 PE=1 SV=1 CANONICAL=A0A4X1VC39-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VC39-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VC39/entry", "sequence": { "sequence": "MADSEKLDNQRLKNFKNKGRDLETMRRQRNEVVVELRKNKRDEHLLKRRNVPHEDICEDSDIDGDYRVQNTSLEAIVQNASSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNILVDTVWALSYLTDAGNEQIQMVIDSGIVPHLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAVIDANLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLDGLSNILKMAEDEAETIANLIEECGGLEKIEQLQNHENEDIYKLAYEIIDQFFSSDDIDEDPSLVPEAIQGGTFGFNSSANVPTEGFQF", "length": 521, "header": "tr|A0A4X1VC39-1|A0A4X1VC39_PIG Isoform 1 of Importin subunit alpha OS=Sus scrofa OX=9823 GN=KPNA4 PE=1 SV=1 CANONICAL=A0A4X1VC39-1" }, "locus": { "chromosome": "13", "start_pos": 100252772, "end_pos": 100187064, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046911.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046911.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047183.1", "url": "https://www.ensembl.org/id/ENSSSCP00000047183.1" } ] } }, { "isoform_ac": "A0A5G2R9L2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9L2/entry", "sequence": { "sequence": "MADSEKLDNQRLKNFKNKGRDLETMRRQRNEVVVELRKNKRDEHLLKRRNVPHEDICEDSDIDGDYRVQNTSLEAIVQNASSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNILVDTVWALSYLTDAGNEQIQMVIDSGIVPHLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAVIDANLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLDGLSNILKMAEDEAETIANLIEECGGLEKIEQLQNHENEDIYKLAYEIIDQFFSSDDRSSHCGSAVTNLTSIHEDMG", "length": 509, "header": "tr|A0A5G2R9L2-1|A0A4X1VC39_PIG Computationally mapped isoform of Importin subunit alpha OS=Sus scrofa OX=9823 GN=KPNA4 PE=1 SV=1 CANONICAL=A0A4X1VC39-1" }, "locus": { "chromosome": "13", "start_pos": 100252772, "end_pos": 100188934, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084925.1", "url": "https://www.ensembl.org/id/ENSSSCT00000084925.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073009.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073009.1" } ] } }, { "isoform_ac": "A0A8W4F8L1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F8L1/entry", "sequence": { "sequence": "MADSEKLDNQRLKNFKNKGRDLETMRRQRNEVVVELRKNKRDEHLLKRRNVPHEDICEDSDIDGDYRVQNTSLEAIVQNASSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAVIDANLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLDGLSNILKMAEDEAETIANLIEECGGLEKIEQLQNHENEDIYKLAYEIIDQFFSSDDIDEDPSLVPEAIQGGTFGFNSSANVPTEGFQF", "length": 477, "header": "tr|A0A8W4F8L1-1|A0A4X1VC39_PIG Computationally mapped isoform of Importin subunit alpha OS=Sus scrofa OX=9823 GN=KPNA4 PE=1 SV=1 CANONICAL=A0A4X1VC39-1" }, "locus": { "chromosome": "13", "start_pos": 100252772, "end_pos": 100187064, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105663.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105663.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075155.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075155.1" } ] } }, { "isoform_ac": "A0A8W4FHG3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FHG3/entry", "sequence": { "sequence": "MADSEKLDNQRLKNFKNKGRDLETMRRQRNEVVVELRKNKRDEHLLKRRNVPHEDICEDSDIDGDYRVQNTSLEAIVQNASSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNILVDTVWALSYLTDAGNEQIQMVIDSGIVPHLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAVIDANLVPMIIHLLDKVAYLIQQNVIPPFCNLLTVKDAQVVQVVLDGLSNILKMAEDEAETIANLIEECGGLEKIEQLQNHENEDIYKLAYEIIDQFFSSDDIDEDPSLVPEAIQGGTFGFNSSANVPTEGFQF", "length": 497, "header": "tr|A0A8W4FHG3-1|A0A4X1VC39_PIG Computationally mapped isoform of Importin subunit alpha OS=Sus scrofa OX=9823 GN=KPNA4 PE=1 SV=1 CANONICAL=A0A4X1VC39-1" }, "locus": { "chromosome": "13", "start_pos": 100252772, "end_pos": 100187064, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000103293.1", "url": "https://www.ensembl.org/id/ENSSSCT00000103293.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078677.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078677.1" } ] } }, { "isoform_ac": "A0A8W4FN19-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FN19/entry", "sequence": { "sequence": "MADSEKLDNQRLKNFKNKGRDLEDNFSVEKNTPGVRGHPGDANSAFQRPVFYCGYS", "length": 56, "header": "tr|A0A8W4FN19-1|A0A4X1VC39_PIG Computationally mapped isoform of Importin subunit alpha OS=Sus scrofa OX=9823 GN=KPNA4 PE=1 SV=1 CANONICAL=A0A4X1VC39-1" }, "locus": { "chromosome": "13", "start_pos": 100252772, "end_pos": 100252034, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102321.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102321.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080293.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080293.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4F8L1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F8L1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100620632", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100620632", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7J6W5-1", "protein_name": "Importin subunit alpha", "gene_name": "Kpna4", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MWLTTMRRQRNEVVVELRKNKRDEHLLKRRNVPQEDICEDSDIDGDYRVQNTSLEAIVQNASSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLRSSHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNILVDTVWALSYLTDAGNEQIQMVIDSGIVPHLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAVIDANLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLDGLSNILKMAEDEAETIANLIEECGGLEKIEQLQNHENEDIYKLAYEIIDQFFSSDDIDEDPSLVPEAVQGGTFGFNSSANVPTEGFQF", "length": 502 }, "evidence": [ { "id": "A0A4X1VC39", "url": "https://omabrowser.org/oma/group/A0A4X1VC39/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "F7FQB8-1", "protein_name": "Karyopherin subunit alpha 4", "gene_name": "Kpna4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGVAAKPGPQIEAASPSQPAAHSAAVAAAGPAVVFARAAVVPGLRAGEGSQGAEAGRARGRERTGGRRRRRPASWERRCGAVVGADPAGPGRGGRVAGPAMADNEKLDNQRLKNFKNKGRDLETMRRQRNEVVVELRKNKRDEHLLKRRNVPQEDICEDSDIDGDYRVQNTSLEAIVQNASSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNILVDTVWALSYLTDAGNEQIQMVIDSGIVPHLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAVIDANLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLDGLSNILKMAEDQAETIANLIEECGGLEKIEQLQNHENEDIYKLAYEIIDQFFSSDDIDEDPSLVPESVQGGTFGFNSSTNVPTEGFQF", "length": 621 }, "evidence": [ { "id": "A0A4X1VC39", "url": "https://omabrowser.org/oma/group/A0A4X1VC39/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "O00629-1", "protein_name": "Importin subunit alpha-3", "gene_name": "KPNA4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MADNEKLDNQRLKNFKNKGRDLETMRRQRNEVVVELRKNKRDEHLLKRRNVPHEDICEDSDIDGDYRVQNTSLEAIVQNASSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNILVDTVWALSYLTDAGNEQIQMVIDSGIVPHLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAVIDANLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLDGLSNILKMAEDEAETIGNLIEECGGLEKIEQLQNHENEDIYKLAYEIIDQFFSSDDIDEDPSLVPEAIQGGTFGFNSSANVPTEGFQF", "length": 521 }, "evidence": [ { "id": "A0A4X1VC39", "url": "https://omabrowser.org/oma/group/A0A4X1VC39/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "O35343-1", "protein_name": "Importin subunit alpha-3", "gene_name": "Kpna4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADNEKLDNQRLKNFKNKGRDLETMRRQRNEVVVELRKNKRDEHLLKRRNVPQEDICEDSDIDGDYRVQNTSLEAIVQNASSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNILVDTVWALSYLTDAGNEQIQMVIDSGIVPHLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAVIDANLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLDGLSNILKMAEDQAETIANLIEECGGLEKIEQLQNHENEDIYKLAYEIIDQFFSSDDIDEDPSLVPESVQGGTFGFNSSTNVPTEGFQF", "length": 521 }, "evidence": [ { "id": "A0A4X1VC39", "url": "https://omabrowser.org/oma/group/A0A4X1VC39/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9V455-1", "protein_name": "Importin subunit alpha", "gene_name": "Kap-alpha3", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MTSMEQNRLQNFKNKGKDQDEMRRRRNEVTVELRKNKREETILKRRNVPNLDSNTDEEEQLSSSIDLKKLAKAAADATKPEQQLAAVQAARKLLSSDKNPPINDLIQSDILPILVECLKQHNHTMLQFEAAWALTNIASGTSAQTNEVVAAGAVPLFLQLLNSPAPNVCEQAVWALGNIIGDGPLLRDFVIKHGVVQPLLSFIKPDIPITFLRNVTWVIVNLCRNKDPAPPTATIHEILPALNVLIHHTDTNILVDTVWAISYLTDGGNDQIQMVIESGVVPKLIPLLGNSEVKVQTAALRAVGNIVTGSDEQTQVVLNYDALSYFPGLLSHPKEKIRKEAVWFLSNITAGNQSQVQAVINVGLLPKIIENLSKGEFQTQKEAAWAISNLTISGNREQVFTLIKEGVIPPFCDLLSCQDTQVINVVLDGLNNMLKVADSHVEAVANCIEECEGLAKIERLQSHENVEIYKLAYEIIDQYFTDEGEQTNMAPTSDGAQYNFDPHADRLTMNSFNF", "length": 514 }, "evidence": [ { "id": "A0A4X1VC39", "url": "https://omabrowser.org/oma/group/A0A4X1VC39/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VC39", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VC39" } ], "pmid": "" }, { "name": "nuclear pore", "id": "GO:0005643", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005643", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VC39", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VC39" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VC39", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VC39" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VC39", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VC39" } ], "pmid": "" }, { "name": "NLS-dependent protein nuclear import complex", "id": "GO:0042564", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042564", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VC39", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VC39" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "nuclear localization sequence binding", "id": "GO:0008139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008139", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VC39", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VC39" } ], "pmid": "" }, { "name": "nuclear import signal receptor activity", "id": "GO:0061608", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061608", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VC39", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VC39" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "NLS-bearing protein import into nucleus", "id": "GO:0006607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006607", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VC39", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VC39" } ], "pmid": "" }, { "name": "protein import into nucleus", "id": "GO:0006606", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006606", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VC39", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VC39" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 219, "end_pos": 221, "annotation": "n_glycosylation_sequon" }, { "start_pos": 352, "end_pos": 354, "annotation": "n_glycosylation_sequon" }, { "start_pos": 394, "end_pos": 396, "annotation": "n_glycosylation_sequon" }, { "start_pos": 509, "end_pos": 511, "annotation": "n_glycosylation_sequon" }, { "start_pos": 70, "end_pos": 72, "annotation": "n_glycosylation_sequon" }, { "start_pos": 79, "end_pos": 81, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1VC39", "database": "UniProtKB", 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"sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1VC88-1", "uniprot_ac": "A0A4X1VC88", "uniprot_id": "A0A4X1VC88_PIG", "mass": { "chemical_mass": 51972.0, "monoisotopic_mass": 51972.0 }, "refseq": { "ac": "XP_001928153", "name": "microfibrillar-associated protein 1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001928153" }, "gene_names": [ { "name": "MFAP1", "type": "recommended", "evidence": [ { "id": "A0A4X1VC88", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VC88" } ] }, { "name": "MFAP1", "type": "synonym", "evidence": [ { "id": "XP_001928153", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001928153" } ] } ], "protein_names": [ { "name": "Microfibril associated protein 1", "type": "synonym", "evidence": [ { "id": "A0A4X1VC88", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VC88/entry#names_and_taxonomy" } ] }, { "name": "microfibrillar-associated protein 1", "type": "synonym", "evidence": [ { "id": "XP_001928153", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001928153" } ] } ], "function": [ { "annotation": "Involved in pre-mRNA splicing as a component of the spliceosome.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VC88", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VC88#function" }, { "database": "UniProtKB", "id": "ARBA00002609", "url": "https://www.uniprot.org/uniprotkb/ARBA00002609#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VC88", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VC88" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MFAP1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VC88", "locus": { "chromosome": "1", "start_pos": 127756205, "end_pos": 127741455, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000040383", "url": "https://www.ensembl.org/id/ENSSSCG00000040383" } ] } } ], "crossref": [ { "id": "A0A4X1VC88", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VC88", "database": "AlphaFoldDB", "categories": [] }, { "id": "100157390", "url": "https://www.ncbi.nlm.nih.gov/gene/100157390", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR009730", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009730", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR033194", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033194", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100157390", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157390", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FHNERAG", "url": "https://omabrowser.org/oma/group/FHNERAG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VC88", "url": "https://www.orthodb.org/?gene=A0A4X1VC88", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15327", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15327", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06991", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06991", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_001928153", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001928153", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VC88", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VC88", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VC88-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VC88-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSVPSALMKQPPIQSTAGAVPVRNEKGEISMEKVKVKRYVSGKRPDYAPMESSDEEDEEFQFIKKAKEQEAEPEEQEEDSSSDPRLRRLQNRISEDVEERLARHRKIVEPEVVGESDSEVEGDAWRMEREDTSEEEEEEIDDEEIERRRGMMRQRAQERKNEEMEVMEVEDEGRSGEESESESEYEEYTDSEDEMEPRLKPVFIRKKDRVTVQEREAEALKQKELEQEAKRMAEERRKYTLKIVEEETKKELEENKRSLAALDALNTDDENDEEEYEAWKVRELKRIKRDREDREALEKEKAEIERMRNLTEEERRAELRANGKVITNKAVKGKYKFLQKYYHRGAFFMDEDEEVYKRDFSAPTLEDHFNKTILPKVMQVKNFGRSGRTKYTHLVDQDTTSFDSAWGQESAQNTKFFKQKAAGVRDVFERPSAKKRKTT", "length": 439, "header": "tr|A0A4X1VC88-1|A0A4X1VC88_PIG Isoform 1 of Microfibril associated protein 1 OS=Sus scrofa OX=9823 GN=MFAP1 PE=3 SV=1 CANONICAL=A0A4X1VC88-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VC88-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VC88/entry", "sequence": { "sequence": "MSVPSALMKQPPIQSTAGAVPVRNEKGEISMEKVKVKRYVSGKRPDYAPMESSDEEDEEFQFIKKAKEQEAEPEEQEEDSSSDPRLRRLQNRISEDVEERLARHRKIVEPEVVGESDSEVEGDAWRMEREDTSEEEEEEIDDEEIERRRGMMRQRAQERKNEEMEVMEVEDEGRSGEESESESEYEEYTDSEDEMEPRLKPVFIRKKDRVTVQEREAEALKQKELEQEAKRMAEERRKYTLKIVEEETKKELEENKRSLAALDALNTDDENDEEEYEAWKVRELKRIKRDREDREALEKEKAEIERMRNLTEEERRAELRANGKVITNKAVKGKYKFLQKYYHRGAFFMDEDEEVYKRDFSAPTLEDHFNKTILPKVMQVKNFGRSGRTKYTHLVDQDTTSFDSAWGQESAQNTKFFKQKAAGVRDVFERPSAKKRKTT", "length": 439, "header": "tr|A0A4X1VC88-1|A0A4X1VC88_PIG Isoform 1 of Microfibril associated protein 1 OS=Sus scrofa OX=9823 GN=MFAP1 PE=3 SV=1 CANONICAL=A0A4X1VC88-1" }, "locus": { "chromosome": "1", "start_pos": 127755633, "end_pos": 127741608, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066231.3", "url": "https://www.ensembl.org/id/ENSSSCT00000066231.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000044114.1", "url": "https://www.ensembl.org/id/ENSSSCP00000044114.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VC88", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VC88" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100157390", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157390", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I5ZMN0-1", "protein_name": "Microfibrillar-associated protein 1A like 1", "gene_name": "Mfap1al1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSVPSTLMKQPPIQSTAGAVPVRNEKGEISMEKVKVKRYVSGKRPDYAPMESSDEEDEEFQFIKKAKEQEAEPEEQEEDSSSDPRLRRLQNRISEDVEERLARHRKIVEPEVVGESDSEVGDAWRMEREDSSEEEEEEIDDEEIERRRGMMRQRAQERKNEEMEVMEVEDEGRSGEESESESEYEEYTDSEDEMEPRLKPVFIRKKDRVTVQEREAEALKQKELEQEAKRMAEERRKYTLKIVEEETKKELEENKRSLAALDALNTDDENDEEEYEAWKVRELKRIKRDREDREALEKEKAEIERMRNLTEEERRAELRANGKVITNKAVKGKYKFLQKYYHRGAFFMDEDEEVYKRDFSAPTLEDHFNKTILPKVMQVKNFGRSGRTKYTHLVDQDTTSFDSAWGQESAQNTKFFKQKAAGVRDVFERPSAKKRKTT", "length": 438 }, "evidence": [ { "id": "A0A4X1VC88", "url": "https://omabrowser.org/oma/group/A0A4X1VC88/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "C0HKD8-1", "protein_name": "Microfibrillar-associated protein 1A", "gene_name": "Mfap1a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVPSALMKQPPIQSTAGAVPVRNEKGEISMEKVKVKRYVSGKRPDYAPMESSDEEDEEFQFIKKAKEQEAEPEEQEEDSSSDPRLRRLQNRISEDVEERLARHRKIVEPEVVGESDSEVEGDAWRLEREDSSEEEEEEIDDEEIERRRGMMRQRAQERKNEEMEVMEVEDEGRSGEESESESEYEEYTDSEDEMEPRLKPVFIRKKDRVTVQEREAEALKQKELEQEAKRMAEERRKYTLKIVEEETKKELEENKRSLAALDALNTDDENDEEEYEAWKVRELKRIKREREDREALEKEKAEIERMRNLTEEERRAELRANGKVITNKAVKGKYKFLQKYYHRGAFFMDEDEEVYKRDFSAPTLEDHFNKTILPKVMQVKNFGRSGRTKYTHLVDQDTTSFDSAWGQESAQNTKFFKQKAAGVRDVFERPSAKKRKTT", "length": 439 }, "evidence": [ { "id": "A0A4X1VC88", "url": "https://omabrowser.org/oma/group/A0A4X1VC88/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD9-1", "protein_name": "Microfibrillar-associated protein 1B", "gene_name": "Mfap1b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVPSALMKQPPIQSTAGAVPVRNEKGEISMEKVKVKRYVSGKRPDYAPMESSDEEDEEFQFIKKAKEQEAEPEEQEEDSSSDPRLRRLQNRISEDVEERLARHRKIVEPEVVGESDSEVEGDAWRLEREDSSEEEEEEIDDEEIERRRGMMRQRAQERKNEEMEVMEVEDEGRSGEESESESEYEEYTDSEDEMEPRLKPVFIRKKDRVTVQEREAEALKQKELEQEAKRMAEERRKYTLKIVEEETKKELEENKRSLAALDALNTDDENDEEEYEAWKVRELKRIKREREDREALEKEKAEIERMRNLTEEERRAELRANGKVITNKAVKGKYKFLQKYYHRGAFFMDEDEEVYKRDFSAPTLEDHFNKTILPKVMQVKNFGRSGRTKYTHLVDQDTTSFDSAWGQESAQNTKFFKQKAAGVRDVFERPSAKKRKTT", "length": 439 }, "evidence": [ { "id": "A0A4X1VC88", "url": "https://omabrowser.org/oma/group/A0A4X1VC88/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3H0T7-1", "protein_name": "Microfibrillar-associated protein 1", "gene_name": "Mfap1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSVPSALMKQPPIQSTAGAVPVRNEKGEISMEKVKVKRYVSGKRPDYAPMESSDEEDEEFQFIKKAKEQEAEPEEQEEDSSSDPRLRRLQNRISEDVEERLARHRKIVEPEVVGESDSEVEGDAWRMEREDSSEEEEEEIDDEEIERRRGMMRQRAQERKNEEMEVMELEDEGRSGEESESESEYEEYTDSEDEMEPRLKPVFIRKKDRVTVQEREAEALKQKELEQEAKRMAEERRKYTLKIVEEETKKELEENKRSLAALDALNTDDENDEEEYEAWKVRELKRIKRDREDREALEKEKAEIERMRNLTEEERRAELRANGKVITNKAVKGKYKFLQKYYHRGAFFMDEDEEVYKRDFSAPTLEDHFNKTILPKVMQVKNFGRSGRTKYTHLVDQDTTSFDSAWGQESAQNTKFFKQKAAGVRDVFERPSAKKRKTT", "length": 439 }, "evidence": [ { "id": "A0A4X1VC88", "url": "https://omabrowser.org/oma/group/A0A4X1VC88/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "O22281-1", "protein_name": "Microfibrillar-associated protein-like protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSVTAGVSESAIAVREKLKGGIGQTKVRRYWPGKAPEWAEEAEEDDDVRMQKFSVLDRAFPKNDDLGVARKDDPRLRRLAQTKVENRDEVRADHRRIRQAEIISTEEEESRNQENRDEDDDEDALEERRRRIKEKNLRRAQEEAALLPLEEEDEIQEEEEEEEESEYETDSEDDMPGIALIKPVFVPKAERDTIAERERLEAEEEALEELAKRKLEQRKIETKQIVVEEVRKDEEIRKNILLEEANIGDVETDDELNEAEEYEVWKTREIGRIKRERDAREAMLREREEIEKLRNMTEQERRDWERKNPKPSSAQPKKKWNFMQKYYHKGAFFQADPDDEAGSAGTDGIFQRDFSAPTGEDRLDKSILPKVMQVKHFGRSGRTKWTHLVNEDTTDWSNPWTSNDPLREKYNKKMAGMDAPIAKPKGSKKMKDWET", "length": 435 }, "evidence": [ { "id": "A0A4X1VC88", "url": "https://omabrowser.org/oma/group/A0A4X1VC88/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P55081-1", "protein_name": "Microfibrillar-associated protein 1", "gene_name": "MFAP1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSVPSALMKQPPIQSTAGAVPVRNEKGEISMEKVKVKRYVSGKRPDYAPMESSDEEDEEFQFIKKAKEQEAEPEEQEEDSSSDPRLRRLQNRISEDVEERLARHRKIVEPEVVGESDSEVEGDAWRMEREDSSEEEEEEIDDEEIERRRGMMRQRAQERKNEEMEVMEVEDEGRSGEESESESEYEEYTDSEDEMEPRLKPVFIRKKDRVTVQEREAEALKQKELEQEAKRMAEERRKYTLKIVEEETKKELEENKRSLAALDALNTDDENDEEEYEAWKVRELKRIKRDREDREALEKEKAEIERMRNLTEEERRAELRANGKVITNKAVKGKYKFLQKYYHRGAFFMDEDEEVYKRDFSAPTLEDHFNKTILPKVMQVKNFGRSGRTKYTHLVDQDTTSFDSAWGQESAQNTKFFKQKAAGVRDVFERPSAKKRKTT", "length": 439 }, "evidence": [ { "id": "A0A4X1VC88", "url": "https://omabrowser.org/oma/group/A0A4X1VC88/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q54SU3-1", "protein_name": "Protein MFAP1 homolog", "gene_name": "mfap1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSVASRIRDKLKNNLESSGGHSVVTSGTKVIRYRAGQRPDYAEAEDDQDSHFSNIQNQKSIKEAETNDPRLARFKNRSSNQDEPQSVEERKASRRRHHDDDNDNDTTTTTTTTTSRRIQKTEIIKEDDDNNNNNNNDTKKDHNDDDEDDDRRRRAKERYLKKKEEEEQKQKELEEKQQPFKDIEGESEEEGSSEYETDSEEDDEDEYWDQPPIFRPTFIKKDDRGTIKTDEQWEKEEQEQQAQLEREKEQRKIEAHRKLKDELDRDRKEQEAKELEQKEEEEYDDDEDQDGSKKLLWIQRELERVRLEIHTRLLAEFEKKEFARRRAMTDDQILKEDPSRSRTNIDNSQKKQLKFLQRDYHRGAFFQDDEYIKNKDFSAPTGEDKFNRELLPKVMQVKNFGKAGRTKYTHLKDQDTTEKDSLWNTNYNNKKKYNNNNNNSNSNSSNNNRDYNYRDRDNRS", "length": 460 }, "evidence": [ { "id": "A0A4X1VC88", "url": "https://omabrowser.org/oma/group/A0A4X1VC88/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q5EA98-1", "protein_name": "Microfibrillar-associated protein 1", "gene_name": "MFAP1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSVPSSLMKQPPIQSTAGAVPVRNEKGEISMEKVKVKRYVSGKRPDYAPMESSDEEDEEFQFIKKAKEQEAEPEEQEEDSSSDPRLRRLQNRISEDVEERLARHRKIVEPEVVGESDSEVEGDPWRMEREDSSEEEEEEIDEEEIERRRGMMRQRAQERKNEELEVMEVEDEGRSGEESESESEYEEYTDSEDEMEPRLKPVFIRKKDRVTVQEREAEALKQKELEQEAKHMAEERRKYTLKIVEEETKKELEENKRSLAALDALNTDDENDEEEYEAWKVRELKRIKRDREDREALEKEKAEIERMRNLTEEERRAELRANGKVITNKAVKGKYKFLQKYYHRGAFFMDEDEEVYKRDFSAPTLEDHFNKTILPKVMQVKNFGRSGRTKYTHLVDQDTTSFDSAWGQESAQNTKFFKQKAAGVRDVFERPSAKKRKTT", "length": 439 }, "evidence": [ { "id": "A0A4X1VC88", "url": "https://omabrowser.org/oma/group/A0A4X1VC88/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9W062-1", "protein_name": "Microfibrillar-associated protein 1", "gene_name": "Mfap1", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": 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Reduces selenite and dehydroascorbate and may act as an antioxidant during oxidative stress response. Can insert into membranes and form voltage-dependent multi-ion conductive channels. Membrane insertion seems to be redox-regulated and may occur only under oxidizing conditions. 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Classification" ] }, { "id": "IPR040079", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040079", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053823", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053823", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:110255330", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110255330", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SYMKAIF", "url": "https://omabrowser.org/oma/group/SYMKAIF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VDN4", "url": "https://www.orthodb.org/?gene=A0A4X1VDN4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR45476", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45476", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45476:SF2", "url": 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"https://www.rhea-db.org/rhea/66324", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "75347", "url": "https://www.rhea-db.org/rhea/75347", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "75383", "url": "https://www.rhea-db.org/rhea/75383", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "76159", "url": "https://www.rhea-db.org/rhea/76159", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1VDN4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDN4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VDN4-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDN4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAEEQPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPGGQLPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKNSNPALNDNLEKGLLKALKVLDNYLTSPLPEEVDETSAEDEGISQRKFLDGNELTLADCNLLPKLHIVQVVCKKYRGFSIPDAFRGVHRYLRNAYAREEFASTCPDDEEIELAYEQVAKALK", "length": 241, "header": "tr|A0A4X1VDN4-1|A0A4X1VDN4_PIG Isoform 1 of Chloride intracellular channel protein OS=Sus scrofa OX=9823 GN=CLIC1 PE=3 SV=1 CANONICAL=A0A4X1VDN4-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VDN4-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDN4/entry", "sequence": { "sequence": "MAEEQPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPGGQLPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKNSNPALNDNLEKGLLKALKVLDNYLTSPLPEEVDETSAEDEGISQRKFLDGNELTLADCNLLPKLHIVQVVCKKYRGFSIPDAFRGVHRYLRNAYAREEFASTCPDDEEIELAYEQVAKALK", "length": 241, "header": "tr|A0A4X1VDN4-1|A0A4X1VDN4_PIG Isoform 1 of Chloride intracellular channel protein OS=Sus scrofa OX=9823 GN=CLIC1 PE=3 SV=1 CANONICAL=A0A4X1VDN4-1" }, "locus": { "chromosome": "7", "start_pos": 23849100, "end_pos": 23843092, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107851.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107851.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000082235.1", "url": "https://www.ensembl.org/id/ENSSSCP00000082235.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VDN4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDN4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:110255330", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110255330", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "O00299-1", "protein_name": "Chloride intracellular channel protein 1", "gene_name": "CLIC1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAEEQPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPGGQLPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKNSNPALNDNLEKGLLKALKVLDNYLTSPLPEEVDETSAEDEGVSQRKFLDGNELTLADCNLLPKLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIELAYEQVAKALK", "length": 241 }, "evidence": [ { "id": "A0A4X1VDN4", "url": "https://omabrowser.org/oma/group/A0A4X1VDN4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5E9B7-1", "protein_name": "Chloride intracellular channel protein 1", "gene_name": "CLIC1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAEEQPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPGGQLPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKNSNPALNDNLEKGLLKALKVLDNYLTSPLPDEVDETSAEDEGISQRKFLDGNELTLADCNLLPKLHIVQVVCKKYRGFSIPDVFRGVHRYLRNAYAREEFASTCPDDEEIELAYEQVAKALK", "length": 241 }, "evidence": [ { "id": "A0A4X1VDN4", "url": "https://omabrowser.org/oma/group/A0A4X1VDN4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q6MG61-1", "protein_name": "Chloride intracellular channel protein 1", "gene_name": "Clic1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEEQPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPGGQLPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTSGLDIFAKFSAYIKNSNPALNDNLEKGLLKALKVLDNYLTSPLPEEVDETSAEDEGISQRKFLDGNELTLADCNLLPKLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIELAYEQVARALK", "length": 241 }, "evidence": [ { "id": "A0A4X1VDN4", "url": "https://omabrowser.org/oma/group/A0A4X1VDN4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8LE52-1", "protein_name": "Glutathione S-transferase DHAR3, chloroplastic", "gene_name": "DHAR3", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MISLRFQPSTTAGVLSASVSRAGFIKRCGSTKPGRVGRFVTMATAASPLEICVKASITTPNKLGDCPFCQKVLLTMEEKNVPYDMKMVDLSNKPEWFLKISPEGKVPVVKFDEKWVPDSDVITQALEEKYPEPPLATPPEKASVGSKIFSTFVGFLKSKDSGDGTEQVLLDELTTFNDYIKDNGPFINGEKISAADLSLAPKLYHMKIALGHYKNWSVPDSLPFVKSYMENVFSRESFTNTRAETEDVIAGWRPKVMG", "length": 258 }, "evidence": [ { "id": "A0A4X1VDN4", "url": "https://omabrowser.org/oma/group/A0A4X1VDN4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9Z1Q5-1", "protein_name": "Chloride intracellular channel protein 1", "gene_name": "Clic1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAEEQPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPGGQLPFLLYGTEVHTDTNKIEEFLEAMLCPPRYPKLAALNPESNTSGLDIFAKFSAYIKNSNPALNDNLEKGLLKALKVLDNYLTSPLPEEVDETSAEDEGISQRKFLDGNELTLADCNLLPKLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIELAYEQVARALK", "length": 241 }, "evidence": [ { "id": "A0A4X1VDN4", "url": "https://omabrowser.org/oma/group/A0A4X1VDN4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VDN4", "url": 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"UniProtKB", "id": "A0A4X1VDN4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDN4" } ], "pmid": "" }, { "name": "glutathione dehydrogenase (ascorbate) activity", "id": "GO:0045174", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045174", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VDN4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDN4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 42, "end_pos": 44, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "24424", "name": "", "equation": "L-dehydroascorbate + 2 glutathione = glutathione disulfide + L-ascorbate", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "24424", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/24424" } ] }, { "id": "29823", "name": "", "equation": "chloride(in) = chloride(out)", "summary": "", 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"evidence": [ { "id": "A0A4X1VDV2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDV2" } ] } ], "protein_names": [ { "name": "Syntaxin-binding protein 4", "type": "recommended", "evidence": [ { "id": "A0A4X1VDV2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDV2/entry#names_and_taxonomy" } ] }, { "name": "Syntaxin 4-interacting protein", "type": "synonym", "evidence": [ { "id": "A0A4X1VDV2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDV2/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Plays a role in the translocation of transport vesicles from the cytoplasm to the plasma membrane. Inhibits the translocation of SLC2A4 from intracellular vesicles to the plasma membrane by STX4A binding and preventing the interaction between STX4A and VAMP2. Stimulation with insulin disrupts the interaction with STX4A, leading to increased levels of SLC2A4 at the plasma membrane. May also play a role in the regulation of insulin release by pancreatic beta cells after stimulation by glucose.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VDV2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDV2#function" }, { "database": "UniProtKB", "id": "ARBA00053815", "url": "https://www.uniprot.org/uniprotkb/ARBA00053815#function" }, { "database": "UniProtKB", "id": "A0A8D1JZI7", "url": "https://www.uniprot.org/uniprotkb/A0A8D1JZI7#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VDV2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDV2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "STXBP4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDV2", "locus": { "chromosome": "12", "start_pos": 31472792, "end_pos": 31277487, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000017602", "url": "https://www.ensembl.org/id/ENSSSCG00000017602" } ] } } ], "crossref": [ { "id": "A0A4X1VDV2", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VDV2", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd00201", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00201", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd06698", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06698", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001202", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001202", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001478", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001478", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011992", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011992", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036020", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036020", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036034", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036034", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051342", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051342", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR19964", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19964", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR19964:SF16", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19964:SF16", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00397", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00397", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00595", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00595", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A4X1VDV2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDV2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VDV2-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDV2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1JZI7", "url": "https://www.uniprot.org/uniprotkb/A0A8D1JZI7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1JZI7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1JZI7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSKNVSAVVSSGLLEKDPAFQMITVTKETGLGLKILGGINRNEGPMVYVQEIIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESAWEIAFIRQKSDNNHLENPSCISVLQATGEYGPQASTFSLLSSPPETLIPKTSSTPKSTNVILPSFKMNQVKTGYKKTEQTPVTSLDNSPTDMSNTNIAPAWTDNYGPQGKKISLNPSVRLKVEKLEMALNYLGIQPTKEQHRALRRQVQVDSKGTVSFGDFVQVARNLFSLQLDEVNVGAHEISNILDSQLPPCDSLEADEMERLKHERNDALEEVNILKEKLFESEKQRKQLTEELQNVKQEAKAMVEETRALRSRIHLAEAAQRQAHGMEMDYEEVIRLLEAEITELKAQLADYSDQNKESVQELRKRITVLDCQLRKSEMARKTFEASTEKLLHFVETIQEVFSDNSAPLSNLSERRAMLASQTSLTPLGRNGRNIPATLALESKELVKSVRAVLDMDCLPYGWEEAYTADGIKYFINHVTQTTSWIHPVMSALSLSCSEENEEDCSRELPDQKN", "length": 558, "header": "tr|A0A4X1VDV2-1|A0A4X1VDV2_PIG Isoform 1 of Syntaxin-binding protein 4 OS=Sus scrofa OX=9823 GN=STXBP4 PE=4 SV=1 CANONICAL=A0A4X1VDV2-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VDV2-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDV2/entry", "sequence": { "sequence": "MSKNVSAVVSSGLLEKDPAFQMITVTKETGLGLKILGGINRNEGPMVYVQEIIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESAWEIAFIRQKSDNNHLENPSCISVLQATGEYGPQASTFSLLSSPPETLIPKTSSTPKSTNVILPSFKMNQVKTGYKKTEQTPVTSLDNSPTDMSNTNIAPAWTDNYGPQGKKISLNPSVRLKVEKLEMALNYLGIQPTKEQHRALRRQVQVDSKGTVSFGDFVQVARNLFSLQLDEVNVGAHEISNILDSQLPPCDSLEADEMERLKHERNDALEEVNILKEKLFESEKQRKQLTEELQNVKQEAKAMVEETRALRSRIHLAEAAQRQAHGMEMDYEEVIRLLEAEITELKAQLADYSDQNKESVQELRKRITVLDCQLRKSEMARKTFEASTEKLLHFVETIQEVFSDNSAPLSNLSERRAMLASQTSLTPLGRNGRNIPATLALESKELVKSVRAVLDMDCLPYGWEEAYTADGIKYFINHVTQTTSWIHPVMSALSLSCSEENEEDCSRELPDQKN", "length": 558, "header": "tr|A0A4X1VDV2-1|A0A4X1VDV2_PIG Isoform 1 of Syntaxin-binding protein 4 OS=Sus scrofa OX=9823 GN=STXBP4 PE=4 SV=1 CANONICAL=A0A4X1VDV2-1" }, "locus": { "chromosome": "12", "start_pos": 31469454, "end_pos": 31294542, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000019163.5", "url": "https://www.ensembl.org/id/ENSSSCT00000019163.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000018656.4", "url": "https://www.ensembl.org/id/ENSSSCP00000018656.4" } ] } }, { "isoform_ac": "A0A8D1JZI7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1JZI7/entry", "sequence": { "sequence": "MSKNVSAVVSSGLLEKDPAFQMITVTKETGLGLKILGGINRNEGPMVYVQEIIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESAWEIAFIRQKSDNNHLENPSCISVLQATGEYGPQASTFSLLSSPPETLIPKTSSTPKSTNVILPSFKMNQVKTGYKKTEQTPVTSLDNSPTDMSNTILEAGSAGSWCQHGPDIAPAWTDNYGPQGKKISLNPSVRLKVEKLEMALNYLGIQPTKEQHRALRRQVQVDSKGTVSFGDFVQVARNLFSLQLDEVNVGAHEISNILDSQLPPCDSLEADEMERLKHERNDALEEVNILKEAKAMVEETRALRSRIHLAEAAQRQAHGMEMDYEEVIRLLEAEITELKAQLADYSDQNKESVQELRKRITVLDCQLRKSEMARKTFEASTEKLLHFVETIQEVFSDNSAPLSNLSERRAMLASQTSLTPLGRNGRNIPATLALESKELVKSVRAVLDMDCLPYGWEEAYTADGIKYFINHVTQTTSWIHPVMSALSLSCSEENEEDCSRELPDQKN", "length": 551, "header": "tr|A0A8D1JZI7-1|A0A4X1VDV2_PIG Computationally mapped isoform of Syntaxin-binding protein 4 OS=Sus scrofa OX=9823 GN=STXBP4 PE=4 SV=1 CANONICAL=A0A4X1VDV2-1" }, "locus": { "chromosome": "12", "start_pos": 31469454, "end_pos": 31294542, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070309.2", "url": "https://www.ensembl.org/id/ENSSSCT00000070309.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064914.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064914.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D1JZI7", "url": "https://www.uniprot.org/uniprotkb/A0A8D1JZI7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoplasmic vesicle", "id": "GO:0031410", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031410", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VDV2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDV2" } ], "pmid": "" }, { "name": "phagocytic vesicle", "id": "GO:0045335", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045335", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VDV2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDV2" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VDV2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDV2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 8, "go_terms": [ { "name": "DNA damage response", "id": "GO:0006974", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006974", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VDV2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDV2" } ], "pmid": "" }, { "name": "protein stabilization", "id": "GO:0050821", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050821", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VDV2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDV2" } ], "pmid": "" }, { "name": "insulin receptor signaling pathway", "id": "GO:0008286", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008286", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VDV2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDV2" } ], "pmid": "" }, { "name": "regulation of insulin secretion involved in cellular response to glucose stimulus", "id": "GO:0061178", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061178", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VDV2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDV2" } ], "pmid": "" }, { "name": "positive regulation of keratinocyte proliferation", "id": "GO:0010838", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010838", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VDV2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDV2" } ], "pmid": "" }, { "name": "positive regulation of cell cycle G1/S phase transition", "id": "GO:1902808", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902808", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VDV2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDV2" } ], "pmid": "" }, { "name": "response to stress", "id": "GO:0006950", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006950", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VDV2", "url": 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"domain_list": [ { "evidence": [ { "id": "A0A4X1VDV2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDV2" }, { "id": "PS50106", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50106" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PDZ", "eco_id": "ECO_0000259", "start_pos": 19, "end_pos": 93, "start_aa": "Ala", "end_aa": "Ala", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A4X1VDV2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDV2" }, { "id": "PS50020", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50020" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "WW", "eco_id": "ECO_0000259", "start_pos": 501, "end_pos": 534, "start_aa": "Asp", "end_aa": "Met", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { 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"MTELECPKGSSIMPAAGTMYLTTSTGYPYTYHNGVAYFHSPEVTSVPPSWPSRSISSSPVMVAQPVYQQPAYHYQAPAQCLPGQWQWGVPQSPASSASFLYLQPSEVIYQPVEIAQDGGCVPPPLSLMEASVPEPYSDHGVQATYHQVYASSAIAMPAPVMQPEPIKTVWSVHY", "length": 174, "header": "tr|A0A4X1VE89-1|A0A4X1VG39_PIG Computationally mapped isoform of Protein boule-like OS=Sus scrofa OX=9823 GN=BOLL PE=4 SV=1 CANONICAL=A0A4X1VG39-1" }, "locus": { "chromosome": "15", "start_pos": 101594239, "end_pos": 101537514, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084389.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084389.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060717.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060717.1" } ] } }, { "isoform_ac": "A0A4X1VG39-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VG39/entry", "sequence": { "sequence": 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genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VE89", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VE89" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": 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Common component of RNA polymerases I, II, and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non-coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. Pol II is the central component of the basal RNA polymerase II transcription machinery. Pols are composed of mobile elements that move relative to each other. In Pol II, POLR2F/RPABC2 is part of the clamp element and together with parts of POLR2A/RPB1 and POLR2B/RPB2 forms a pocket to which the POLR2D/RPB4-POLR2G/RPB7 subcomplex binds.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VEK9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VEK9#function" }, { "database": "UniProtKB", "id": "ARBA00044490", "url": "https://www.uniprot.org/uniprotkb/ARBA00044490#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VEK9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VEK9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "POLR2F", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VEK9", "locus": { "chromosome": "5", "start_pos": 9855983, "end_pos": 9917726, "strand": "+", "evidence": [ { "database": "Ensembl 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"url": "https://www.reactome.org/PathwayBrowser/#R-SSC-76066", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_001925881", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001925881", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VEY1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VEY1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VEY1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VEY1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RBJ0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RBJ0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RBJ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RBJ0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F7G8", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F7G8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F7G8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F7G8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FGD7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGD7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FGD7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGD7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SN14", "url": "https://www.uniprot.org/uniprotkb/F1SN14", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SN14-1", "url": "https://www.uniprot.org/uniprotkb/F1SN14-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSGFSPELIDYLEGKISFEEFERRREERKTREKKSLQEKGKSSVEENPNDSEVPSSSGIDFTKSQDKDVNEGETSDGVSKSVHKVFASMLGENEDDEEEEEEEEEEEEEETPEQPTAGDVFVLEMVLNRETKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVRYLWERSSLYEQMGDHKMAMDGYRRILNLLAPSDGDRFMQLARDMAKSYYEASDVISAINVIEEAFSKHPGLVSMEDVNIAGELYISNKQYDKALEVIADFSGIVLEKRSTEEGTEENTADDNVTCIVPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLDARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAAQQELKLLLHRSTLLFSQGKMYGYVDTLLTMLAMLLKVAMNRAQVCLISSSKSGERHLYLIKVSRDKISDSNDQETANCDAKAIFAVLTSVLPKDDWWNLLLKAIYSLCDLSRFQEAELLVDSSLEYYSFYEDRQKRKELEYFGLSAAILDKNFGKAYNYIRLMVMEHVNKPQLWNIFNQITMHSQDVRHHRFCLRLMLKNPDSHALCVLNGHNAFVSGSFKHALGQYVQAFRTYPHEPLYSLCIGLTFIHMASQKYVLRRHALVVQGFSFLNRYLSIRGPCQESFYNLGRGLHQLGLVHLAIHYYQKALELPPLEIEGIEVDQLDLRRDIAYNLSLIYQSSGNIGMAQKLLYTYCSI", "length": 884, "header": "tr|A0A4X1VEY1-1|A0A4X1VEY1_PIG Isoform 1 of Ral transcription factor IIIC subunit 3 OS=Sus scrofa OX=9823 GN=GTF3C3 PE=1 SV=1 CANONICAL=A0A4X1VEY1-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VEY1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VEY1/entry", "sequence": { "sequence": "MSGFSPELIDYLEGKISFEEFERRREERKTREKKSLQEKGKSSVEENPNDSEVPSSSGIDFTKSQDKDVNEGETSDGVSKSVHKVFASMLGENEDDEEEEEEEEEEEEEETPEQPTAGDVFVLEMVLNRETKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVRYLWERSSLYEQMGDHKMAMDGYRRILNLLAPSDGDRFMQLARDMAKSYYEASDVISAINVIEEAFSKHPGLVSMEDVNIAGELYISNKQYDKALEVIADFSGIVLEKRSTEEGTEENTADDNVTCIVPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLDARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAAQQELKLLLHRSTLLFSQGKMYGYVDTLLTMLAMLLKVAMNRAQVCLISSSKSGERHLYLIKVSRDKISDSNDQETANCDAKAIFAVLTSVLPKDDWWNLLLKAIYSLCDLSRFQEAELLVDSSLEYYSFYEDRQKRKELEYFGLSAAILDKNFGKAYNYIRLMVMEHVNKPQLWNIFNQITMHSQDVRHHRFCLRLMLKNPDSHALCVLNGHNAFVSGSFKHALGQYVQAFRTYPHEPLYSLCIGLTFIHMASQKYVLRRHALVVQGFSFLNRYLSIRGPCQESFYNLGRGLHQLGLVHLAIHYYQKALELPPLEIEGIEVDQLDLRRDIAYNLSLIYQSSGNIGMAQKLLYTYCSI", "length": 884, "header": "tr|A0A4X1VEY1-1|A0A4X1VEY1_PIG Isoform 1 of Ral transcription factor IIIC subunit 3 OS=Sus scrofa OX=9823 GN=GTF3C3 PE=1 SV=1 CANONICAL=A0A4X1VEY1-1" }, "locus": { "chromosome": "15", "start_pos": 100701596, "end_pos": 100669010, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069173.1", "url": "https://www.ensembl.org/id/ENSSSCT00000069173.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069223.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069223.1" } ] } }, { "isoform_ac": "A0A5G2RBJ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RBJ0/entry", "sequence": { "sequence": "ASLQEKGKSSVEENPNDSEVPSSSGIDFTKSQDKDVNEGETSDGVSKSVHKVFASMLGENEDDEEEEEEEEEEEEEETPEQPTAGDVFVLEMVLNRETKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVRYLWERSSLYEQMGDHKMAMDGYRRILNLLAPSDGDRFMQLARDMAKSYYEASDVISAINVIEEAFSKHPGLVSMEDVNIAGELYISNKQYDKALEVIADFSGIVLEKRSTEEGTEENTADDNVTCIVPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLDARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAAQQELKLLLHRSTLLFSQGKMYGYVDTLLTMLAMLLKVAMNRAQVCLISSSKSGERHLYLIKVSRDKISDSNDQETANCDAKAIFAVLTSVLPKDDWWNLLLKAIYSLCDLSRFQEAELLVDSSLEYYSFYEDRQKRKELEYFGLSAAILDKNFGKAYNYIRLMVMEHVNKPQLWNIFNQITMHSQDVRHHRFCLRLMLKNPDSHALCVLNGHNAFVSGSFKHALGQYVQAFRTYPHEPLYSLCIGLTFIHMASQKYVLRRHALVVQGFSFLNRYLSIRGPCQESFYNLGRGLHQLGLVHLAIHYYQKALELPPLEIEGIEVDQLDLRRDIAYNLSLIYQSSGNIGMAQKLLYTYCSI", "length": 851, "header": "tr|A0A5G2RBJ0-1|A0A4X1VEY1_PIG Computationally mapped isoform of Ral transcription factor IIIC subunit 3 OS=Sus scrofa OX=9823 GN=GTF3C3 PE=1 SV=1 CANONICAL=A0A4X1VEY1-1" }, "locus": { "chromosome": "15", "start_pos": 100700830, "end_pos": 100669010, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076930.1", "url": "https://www.ensembl.org/id/ENSSSCT00000076930.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073705.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073705.1" } ] } }, { "isoform_ac": "A0A8W4F7G8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F7G8/entry", "sequence": { "sequence": "ASLQEKGKSSVEENPNDSEVPSSSGIDFTKSQDKDVNEGETSDGVSKSVHKVFASMLGENEDDEEEEEEEEEEEEEETPEQPTEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVRYLWERSSLYEQMGDHKMAMDGYRRILNLLAPSDGDRFMQLARDMAKSYYEASDVISAINVIEEAFSKHPGLVSMEDVNIAGELYISNKQYDKALEVIADFSGIVLEKRSTEEGTEENTADDNVTCIVPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLDARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAAQQELKLLLHRSTLLFSQGKMYGYVDTLLTMLAMLLKVAMNRAQVCLISSSKSGERHLYLIKVSRDKISDSNDQETANCDAKAIFAVLTSVLPKDDWWNLLLKAIYSLCDLSRFQEAELLVDSSLEYYSFYEDRQKRKELEYFGLSAAILDKNFGKAYNYIRLMVMEHVNKPQLWNIFNQITMHSQDVRHHRFCLRLMLKNPDSHALCVLNGHNAFVSGSFKHALGQYVQAFRTYPHEPLYSLCIGLTFIHMASQKYVLRRHALVVQGFSFLNRYLSIRGPCQESFYNLGRGLHQLGLVHLAIHYYQKALELPPLEIEGIEVDQLDLRRDIAYNLSLIYQSSGNIGMAQKLLYTYCSI", "length": 831, "header": "tr|A0A8W4F7G8-1|A0A4X1VEY1_PIG Computationally mapped isoform of Ral transcription factor IIIC subunit 3 OS=Sus scrofa OX=9823 GN=GTF3C3 PE=1 SV=1 CANONICAL=A0A4X1VEY1-1" }, "locus": { "chromosome": "15", "start_pos": 100700830, "end_pos": 100669010, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000098730.1", "url": "https://www.ensembl.org/id/ENSSSCT00000098730.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074733.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074733.1" } ] } }, { "isoform_ac": "A0A8W4FGD7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGD7/entry", "sequence": { "sequence": "MLCSQLEGAKCAFEKGKSSVEENPNDSEVPSSSGIDFTKSQDKDVNEGETSDGVSKSVHKVFASMLGENEDDEEEEEEEEEEEEEETPEQPTAGDVFVLEMVLNRETKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVRYLWERSSLYEQMGDHKMAMDGYRRILNLLAPSDGDRFMQLARDMAKSYYEASDVISAINVIEEAFSKHPGLVSMEDVNIAGELYISNKQYDKALEVIADFSGIVLEKRSTEEGTEENTADDNVTCIVPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLDARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAAQQELKLLLHRSTLLFSQGKMYGYVDTLLTMLAMLLKVAMNRAQVCLISSSKSGERHLYLIKVSRDKISDSNDQETANCDAKAIFAVLTSVLPKDDWWNLLLKAIYSLCDLSRFQEAELLVDSSLEYYSFYEDRQKRKELEYFGLSAAILDKNFGKAYNYIRLMVMEHVNKPQLWNIFNQITMHSQDVRHHRFCLRLMLKNPDSHALCVLNGHNAFVSGSFKHALGQYVQAFRTYPHEPLYSLCIGLTFIHMASQKYVLRRHALVVQGFSFLNRYLSIRGPCQESFYNLGRGLHQLGLVHLAIHYYQKALELPPLEIEGIEVDQLDLRRDIAYNLSLIYQSSGNIGMAQKLLYTYCSI", "length": 860, "header": "tr|A0A8W4FGD7-1|A0A4X1VEY1_PIG Computationally mapped isoform of Ral transcription factor IIIC subunit 3 OS=Sus scrofa OX=9823 GN=GTF3C3 PE=1 SV=1 CANONICAL=A0A4X1VEY1-1" }, "locus": { "chromosome": "15", "start_pos": 100700585, "end_pos": 100669010, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000094452.1", "url": "https://www.ensembl.org/id/ENSSSCT00000094452.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078377.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078377.1" } ] } }, { "isoform_ac": "F1SN14-1", "url": "https://www.uniprot.org/uniprotkb/F1SN14/entry", "sequence": { "sequence": "MSGFSPELIDYLEGKISFEEFERRREERKTREKKSLQEKGKSSVEENPNDSEVPSSSGIDFTKSQDKDVNEGETSDGVSKSVHKVFASMLGENEDDEEEEEEEEEEEEEETKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVRYLWERSSLYEQMGDHKMAMDGYRRILNLLAPSDGDRFMQLARDMAKSYYEASDVISAINVIEEAFSKHPGLVSMEDVNIAGELYISNKQYDKALEVIADFSGIVLEKRSTEEGTEENTADDNVTCIVPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLDARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAAQQELKLLLHRSTLLFSQGKMYGYVDTLLTMLAMLLKVAMNRAQVCLISSSKSGERHLYLIKVSRDKISDSNDQETANCDAKAIFAVLTSVLPKDDWWNLLLKAIYSLCDLSRFQEAELLVDSSLEYYSFYEDRQKRKELEYFGLSAAILDKNFGKAYNYIRLMVMEHVNKPQLWNIFNQITMHSQDVRHHRFCLRLMLKNPDSHALCVLNGHNAFVSGSFKHALGQYVQAFRTYPHEPLYSLCIGLTFIHMASQKYVLRRHALVVQGFSFLNRYLSIRGPCQESFYNLGRGLHQLGLVHLAIHYYQKALELPPLEIEGIEVDQLDLRRDIAYNLSLIYQSSGNIGMAQKLLYTYCSI", "length": 864, "header": "tr|F1SN14-1|A0A4X1VEY1_PIG Computationally mapped isoform of Ral transcription factor IIIC subunit 3 OS=Sus scrofa OX=9823 GN=GTF3C3 PE=1 SV=4 CANONICAL=A0A4X1VEY1-1" }, "locus": { "chromosome": "15", "start_pos": 100701596, "end_pos": 100669010, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017496.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017496.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017024.4", "url": "https://www.ensembl.org/id/ENSSSCP00000017024.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SN14", "url": "https://www.uniprot.org/uniprotkb/F1SN14" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:106504094", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:106504094", "resource": "KEGG Pathway" }, { "id": "R-SSC-76061", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-76061", "resource": "Reactome", "description": "RNA Polymerase III Transcription Initiation From Type 1 Promoter" }, { "id": "R-SSC-76066", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-76066", "resource": "Reactome", "description": "RNA Polymerase III Transcription Initiation From Type 2 Promoter" } ], "orthologs": [ { "uniprot_canonical_ac": "D4A7Q9-1", "protein_name": "General transcription factor IIIC subunit 3", "gene_name": "Gtf3c3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSGFSPELIDYLEGKISFEEFERRREERKTREKKSVQEKGKSSPKENPGDAEVPSSSGIDSAKSQDRDANEGETSDGVSKSVHKVFASMLGETEEEEEEEEEEEEEEDTPEQPTAGDVFVLEMVLNRETKKMMKEKRPRSKLPRALRGLMGEANIRFARGEHEEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVRYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDSTSAINIIEEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEVITDFSGIILEKETLEEGTSEENKAAETVTCSIPDSVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYSKVVDLAPLHLDARISLSILQQQLGRPEKALEALEPMYDPDTLAQDANAAQQELKLLLHRSTLLFSQGKMYGYLDTLLTMLAMLLKVAMNRAQVCLISSSKSGERHLYLIKVSRDKISDNNEQETSNYDAKAIFAVLTSVLPKDDWWNLLLKAIYTLSDLSRFQEAELLVDSSLEYYSFYDDRQKRKELEYFGLSAAILDKNFRKAYDYIRVMVMENVNKPQLWNIFNQVTMHSQDVRHHRFCLRLMLKNPDNHALCVLNGHNAFVSGSFKHALGQYVQAFRAYPSEPLYNLCIGLTFIHMASQKYVLKRHALTVQGFSFLNRYLSIRGPCQESFYNLGRGLHQLGLTHLAIHYYQKALALPPIVVEGIEVDQLDLRRDIAYNMSLIYQSSGNTAMAQKLLYTYCVI", "length": 883 }, "evidence": [ { "id": "A0A4X1VEY1", "url": "https://omabrowser.org/oma/group/A0A4X1VEY1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1RDA7-1", "protein_name": "General transcription factor 3C polypeptide 3", "gene_name": "gtf3c3", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSELNDYLEGKITFEEFEKRREERKAKDKEKKGNVLNDEEAAVQEDEAPSTSKQPVKAKRKRKTETTEEGVSPSVQQAFASMIGEGLEECVDDDDDDEDGKMEWKDIEEEDGDDDDDDDDDDNNDADEEEEDGNGITPGDVFALEMELNRENKKMMKERRHRSKLPRALRGLMGEANIRYARGDKEDAILMCMEIIRQAPVAYEPFSTMAMIYEDQGDMEKALQFGLIAAHLNPSDCEEWVKLADMSLEQDNIKQAIICYTKAIKYDSSNVQYLWERSSLYEQVGEHKQAMDGYRRILSLLPPTDGEHFMQLSRDMAKSYYESSELPSAIGVMEEALERHPELVTHECVNMAAELFIANHQHDKALEALVKFCGIVLKRQEKVETKLEEQTLTQDTEEDTKEDTEEEKGKVIEVVIPDAVPIDIRAKMMVCLIHQQVFKPLDPMLTSLMEQSPEELGDLYLDVAEAFMEEGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGHLEVAVKSYSKVVEMAPLHLEARLALSTLQQQLGRPNMALEALEPMYDAETLAQDSSAAQQELKLLLHRSTLLLSQGRMDDYIDTVLTMLSMFLKVAMVRAQVCVVADMSSGVKHLKLIKVSRSALTEIVDQEAAYLDVTGKTSVLSKDDWWKLSLRCLSVLCEEKRFAEAELLVDSTLEYYSFYDDRVKRKELEYLGLSAAFLDHNFRTAYNYIRLMLMDSVERPQLWNVFNQITLHSQDARHHRFCLRLMLKHPDNHALYLLNGHTSLVSGTFKHALGQYMQAFRNEPDHPLHSLAIGLTFFHMACQKFVMKRHSLTVQGFSFLWRYVDLRGQCQESLYNLGRALHQLGLTHLAIHYYEKALTLPPLKMEGIEDDQVDLRREIAYNLSLIYQSSGNKDMARHIIYTYCTI", "length": 918 }, "evidence": [ { "id": "A0A4X1VEY1", "url": "https://omabrowser.org/oma/group/A0A4X1VEY1/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "P33339-1", "protein_name": "Transcription factor tau 131 kDa subunit", "gene_name": "TFC4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MAAGKLKKEQQNQSAERESADTGKVNDEDEEHLYGNIDDYKHLIQDEEYDDEDVPHDLQLSEDEYNSERDSSLLAEFSDYGEISEDDEEDFMNAIREASNFKVKKKKKNDKGKSYGRQRKERVLDPEVAQLLSQANEAFVRNDLQVAERLFNEVIKKDARNFAAYETLGDIYQLQGRLNDCCNSWFLAAHLNASDWEFWKIVAILSADLDHVRQAIYCFSRVISLNPMEWESIYRRSMLYKKTGQLARALDGFQRLYMYNPYDANILRELAILYVDYDRIEDSIELYMKVFNANVERREAILAALENALDSSDEESAAEGEDADEKEPLEQDEDRQMFPDINWKKIDAKYKCIPFDWSSLNILAELFLKLAVSEVDGIKTIKKCARWIQRRESQTFWDHVPDDSEFDNRRFKNSTFDSLLAAEKEKSYNIPIDIRVRLGLLRLNTDNLVEALNHFQCLYDETFSDVADLYFEAATALTRAEKYKEAIDFFTPLLSLEEWRTTDVFKPLARCYKEIESYETAKEFYELAIKSEPDDLDIRVSLAEVYYRLNDPETFKHMLVDVVEMRKHQVDETLHRISNEKSSNDTSDISSKPLLEDSKFRTFRKKKRTPYDAERERIERERRITAKVVDKYEKMKKFELNSGLNEAKQASIWINTVSELVDIFSSVKNFFMKSRSRKFVGILRRTKKFNTELDFQIERLSKLAEGDSVFEGPLMEERVTLTSATELRGLSYEQWFELFMELSLVIAKYQSVEDGLSVVETAQEVNVFFQDPERVKMMKFVKLAIVLQMDDEEELAENLRGLLNQFQFNRKVLQVFMYSLCRGPSSLNILSSTIQQKFFLRQLKAFDSCRYNTEVNGQASITNKEVYNPNKKSSPYLYYIYAVLLYSSRGFLSALQYLTRLEEDIPDDPMVNLLMGLSHIHRAMQRLTAQRHFQIFHGLRYLYRYHKIRKSLYTDLEKQEADYNLGRAFHLIGLVSIAIEYYNRVLENYDDGKLKKHAAYNSIIIYQQSGNVELADHLMEKYLSI", "length": 1025 }, "evidence": [ { "id": "A0A4X1VEY1", "url": "https://omabrowser.org/oma/group/A0A4X1VEY1/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q54YB5-1", "protein_name": "Transcription factor IIIC-gamma subunit", "gene_name": "TFIIIC3", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTTEKSKDLKGLLNENDDDDEMPFNIEEIGIKIHDILVNIPPPSKETSSLNFQENLSEVEESSDSEDDKEESDDDEEDDDEEDDDDDEGGISKEEILRQSKNIAFPEQKAKKRPATPKIVSVLSQKKVVDKADKFDMDTFKTTISGSTSKKKKSLLPTEQDKEEERKRRERDSDDDGNADDDDDDNDKMNIDSNNNNKTTTTTTTTTNKIPKKKKKKRFYSQQEIRIPKEVRKLLVGGNEQYTKGNFDLAFSTYAEVVRMLPRLSIPYNILGKIKESQGEMEAALGFYVYGAQMQGSNGDWSSIGVRAKEAGQMETALYCFSRACRNDETDLDSFWEKSLILIQKGFYKRALKILTKLSKYTNGSPQVLQELARVYSHLSQYHDASAMISEVVDEQLLSNKSLDDVSLDSVNLMMELKNKTRNYQDTITIFNKITAKYGNDSEVPFDLVFNACQAYYSLGTDFGNERGSKLLHLRLLPLDPSEYGDLFTSLADELFALGKYQDALVVYLHLKDTDFDIPSNWVKIADIHRSTKNYEVAIEYFSKANERVPGNVHTTLAMSEIYKEMGDDEKALQILNQSSTISNRNDQSEKELFESTLNELNSKRNAYLNSIKNNSSTAAAAAAAAGGATNTTSTSGAKESNPVGLDVTKEDVKLFYRHAQAFLNLSKYSQYLGIATALLHGSTDRYIYRRKVGVGKFKKRKRVKRSKNPYSIEMYKHQSEHPYAELLDEEDYFNLLLDSSKIFVHLNRQQEASQYLRYALRNIHFENGLFSHQLKFLTVAVAFNDKNYYLAYKHVKYVCSKKPYSNRVWNLFNKIIVNYGNRSTVQNRFLTKINEKYSDSIPVLIMLGNQNKQTDNARGALFEYIKAYRLCPDDPLINLLISVLILSQVMGRKQANRHRIAITSYSFLYKYYNLRGKSQESLYNLGRGYHQLGIYNMAINYYDMVLNYEDEIDEETGEINKNDSLKCEAAFNLSLIYKSKGNTSLANEILKKYIVV", "length": 997 }, "evidence": [ { "id": "A0A4X1VEY1", "url": "https://omabrowser.org/oma/group/A0A4X1VEY1/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9Y5Q9-1", "protein_name": "General transcription factor 3C polypeptide 3", "gene_name": "GTF3C3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSGFSPELIDYLEGKISFEEFERRREERKTREKKSLQEKGKLSAEENPDDSEVPSSSGINSTKSQDKDVNEGETSDGVRKSVHKVFASMLGENEDDEEEEEEEEEEEEEEETPEQPTAGDVFVLEMVLNRETKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVRYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAINIIDEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEIITDFSGIVLEKKTSEEGTSEENKAPENVTCTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLDARISLSTLQQQLGQPEKALEALEPMYDPDTLAQDANAAQQELKLLLHRSTLLFSQGKMYGYVDTLLTMLAMLLKVAMNRAQVCLISSSKSGERHLYLIKVSRDKISDSNDQESANCDAKAIFAVLTSVLTKDDWWNLLLKAIYSLCDLSRFQEAELLVDSSLEYYSFYDDRQKRKELEYFGLSAAILDKNFRKAYNYIRIMVMENVNKPQLWNIFNQVTMHSQDVRHHRFCLRLMLKNPENHALCVLNGHNAFVSGSFKHALGQYVQAFRTHPDEPLYSFCIGLTFIHMASQKYVLRRHALIVQGFSFLNRYLSLRGPCQESFYNLGRGLHQLGLIHLAIHYYQKALELPPLVVEGIELDQLDLRRDIAYNLSLIYQSSGNTGMAQTLLYTYCSI", "length": 886 }, "evidence": [ { "id": "A0A4X1VEY1", "url": "https://omabrowser.org/oma/group/A0A4X1VEY1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "transcription factor TFIIIC complex", "id": "GO:0000127", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000127", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VEY1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VEY1" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VEY1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VEY1" } ], "pmid": "" }, { "name": "nuclear membrane", "id": "GO:0031965", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031965", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VEY1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VEY1" } ], "pmid": "" }, { "name": "fibrillar center", "id": "GO:0001650", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001650", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VEY1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VEY1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "transcription by RNA polymerase III", "id": "GO:0006383", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006383", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VEY1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VEY1" } ], "pmid": "" }, { "name": "transcription initiation at RNA polymerase III promoter", "id": "GO:0006384", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006384", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VEY1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VEY1" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "RNA polymerase III general transcription initiation factor activity", "id": "GO:0000995", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000995", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VEY1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VEY1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 373, "end_pos": 375, "annotation": "n_glycosylation_sequon" }, { "start_pos": 49, "end_pos": 51, "annotation": "n_glycosylation_sequon" }, { "start_pos": 860, "end_pos": 862, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 373, "end_pos": 375 }, { "start_pos": 49, "end_pos": 51 }, { "start_pos": 860, "end_pos": 862 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1VFN4-1", "uniprot_ac": "A0A4X1VFN4", "uniprot_id": "A0A4X1VFN4_PIG", "mass": { "chemical_mass": 56316.0, "monoisotopic_mass": 56316.0 }, "refseq": { "ac": "XP_020957237", "name": "ETS-related transcription factor Elf-2 isoform X9", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020957237" }, "gene_names": [ { "name": "ELF2", "type": "recommended", "evidence": [ { "id": "A0A4X1VFN4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFN4" } ] }, { "name": "ELF2", "type": "synonym", "evidence": [ { "id": "XP_020957237", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020957237" } ] } ], "protein_names": [ { "name": "E74 like ETS transcription factor 2", "type": "synonym", "evidence": [ { "id": "A0A4X1VFN4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFN4/entry#names_and_taxonomy" } ] }, { "name": "ETS-related transcription factor Elf-2 isoform X9", "type": "synonym", "evidence": [ { "id": "XP_020957237", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020957237" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VFN4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFN4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ELF2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFN4", "locus": {} } ], "crossref": [ { "id": "A0A4X1VFN4", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VFN4", "database": "AlphaFoldDB", "categories": [] }, { "id": "100514064", "url": "https://www.ncbi.nlm.nih.gov/gene/100514064", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000418", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000418", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR022084", "url": "https://www.ebi.ac.uk/interpro/entry/IPR022084", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036388", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036388", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036390", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036390", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046328", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046328", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR11849", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11849", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11849:SF10", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11849:SF10", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00178", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00178", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12310", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12310", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8939245", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8939245", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020957237", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020957237", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VFN4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFN4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VFN4-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFN4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VIE2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VIE2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VIE2-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VIE2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MATSLHEGPTNQLDLLIRAVEASVHSSNAHCTDKTIEAAEALLHMESPTCLRDSRSPEFIHAAMRPDVITETVVEVSTEESEPMDTSPIPTSPDSHEPMKKKKVGRKPKTQQSPISNGSPELGIKKKPREGKGNTTYLWEFLLDLLQDKNTCPRYIKWTQREKGIFKLVDSKAVSKLWGKHKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQFKDMPKNIVVIDDDKSETCNEDLASATDEKSLERVSLSAESLLKAATSVRGGKNSSPLNCSRAEKGVARVVNITSPGHDSSCRSPTTTTSVPATAAPRTVRVAMQVPVVMTSLGQKISTVAVQSVNAGAPLITSTSPTTATSPKVVIQTIPTVMPASTENGDKITMQPAKIITIPATQLAQCQLQTKSNLTGSGSINIVGTPLAVRALTPVSIAHGTPVMRLSVPTQQASGQTPPRVISAVIKGPEVKSEAVAKKQEHDVKTLQLVQEEKPTDGNKTVTHVVVVSAPSAIALPVTMKTEGLVTCEK", "length": 522, "header": "tr|A0A4X1VFN4-1|A0A4X1VFN4_PIG Isoform 1 of E74 like ETS transcription factor 2 OS=Sus scrofa OX=9823 GN=ELF2 PE=3 SV=1 CANONICAL=A0A4X1VFN4-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VFN4-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFN4/entry", "sequence": { "sequence": "MATSLHEGPTNQLDLLIRAVEASVHSSNAHCTDKTIEAAEALLHMESPTCLRDSRSPEFIHAAMRPDVITETVVEVSTEESEPMDTSPIPTSPDSHEPMKKKKVGRKPKTQQSPISNGSPELGIKKKPREGKGNTTYLWEFLLDLLQDKNTCPRYIKWTQREKGIFKLVDSKAVSKLWGKHKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQFKDMPKNIVVIDDDKSETCNEDLASATDEKSLERVSLSAESLLKAATSVRGGKNSSPLNCSRAEKGVARVVNITSPGHDSSCRSPTTTTSVPATAAPRTVRVAMQVPVVMTSLGQKISTVAVQSVNAGAPLITSTSPTTATSPKVVIQTIPTVMPASTENGDKITMQPAKIITIPATQLAQCQLQTKSNLTGSGSINIVGTPLAVRALTPVSIAHGTPVMRLSVPTQQASGQTPPRVISAVIKGPEVKSEAVAKKQEHDVKTLQLVQEEKPTDGNKTVTHVVVVSAPSAIALPVTMKTEGLVTCEK", "length": 522, "header": "tr|A0A4X1VFN4-1|A0A4X1VFN4_PIG Isoform 1 of E74 like ETS transcription factor 2 OS=Sus scrofa OX=9823 GN=ELF2 PE=3 SV=1 CANONICAL=A0A4X1VFN4-1" }, "locus": { "chromosome": "8", "start_pos": 87877746, "end_pos": 87854941, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023729.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023729.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000025973.4", "url": "https://www.ensembl.org/id/ENSSSCP00000025973.4" } ] } }, { "isoform_ac": "A0A4X1VIE2-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VIE2/entry", "sequence": { "sequence": "MATSLHEGPTNQLDLLIRAVEASVHSSNAHCTDKTIEAAEALLHMESPTCLRDSRSPVEVFVPPCVSTPEFIHAAMRPDVITETVVEVSTEESEPMDTSPIPTSPDSHEPMKKKKGNTTYLWEFLLDLLQDKNTCPRYIKWTQREKGIFKLVDSKAVSKLWGKHKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQFKDMPKNIVVIDDDKSETCNEDLASATDEKSLERVSLSAESLLKAATSVRGGKNSSPLNCSRAEKGVARVVNITSPGHDSSCRSPTTTTSVPATAAPRTVRVAMQVPVVMTSLGQKISTVAVQSVNAGAPLITSTSPTTATSPKVVIQTIPTVMPASTENGDKITMQPAKIITIPATQLAQCQLQTKSNLTGSGSINIVGTPLAVRALTPVSIAHGTPVMRLSVPTQQASGQTPPRVISAVIKGPEVKSEAVAKKQEHDVKTLQLVQEEKPTDGNKTVTHVVVVSAPSAIALPVTMKTEGLVTCEK", "length": 505, "header": "tr|A0A4X1VIE2-1|A0A4X1VIE2_PIG Computationally mapped isoform of E74 like ETS transcription factor 2 OS=Sus scrofa OX=9823 GN=ELF2 PE=3 SV=1 CANONICAL=A0A4X1VFN4-1" }, "locus": { "chromosome": "8", "start_pos": 87877746, "end_pos": 87854941, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067438.2", "url": "https://www.ensembl.org/id/ENSSSCT00000067438.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064101.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064101.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VFN4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFN4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-8939245", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8939245", "resource": "Reactome", "description": "RUNX1 regulates transcription of genes involved in BCR signaling" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VFN4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFN4" } ], "pmid": "" }, { "name": "nuclear body", "id": "GO:0016604", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016604", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VFN4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFN4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VFN4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFN4" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VFN4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFN4" } ], "pmid": "" }, { "name": "cell differentiation", "id": "GO:0030154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030154", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VFN4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFN4" } ], "pmid": "" }, { "name": "positive regulation of DNA-templated transcription", "id": "GO:0045893", "url": 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"reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NMD3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFP0", "locus": { "chromosome": "13", "start_pos": 100962354, "end_pos": 100924742, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000022952", "url": "https://www.ensembl.org/id/ENSSSCG00000022952" } ] } } ], "crossref": [ { "id": "IPR007064", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007064", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039768", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039768", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048898", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048898", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048899", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048899", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "VILVRKH", "url": 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"UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VFP0-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFP0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R1G4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1G4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R1G4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1G4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1FED4", "url": "https://www.uniprot.org/uniprotkb/A0A8D1FED4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1FED4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1FED4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1U0C8", "url": "https://www.uniprot.org/uniprotkb/A0A8D1U0C8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1U0C8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1U0C8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEYMTESINRTPGHILCCDCGVPISPNPANICVACLRSKVDISQGIPKQVSISFCKQCQRYFQPPGTWIQCALESRELLALCLKKIKAPLSKVRLVDASFVWTEPHSKRLKVKLTIQKEVMNGAILQQVFVVDYVVQSQMCGDCHRVEAKDFWKAVVQVRQKTVHKKTFYYLEQLILKYGMHQNTLRIKEIHDGLDFYYSSKQHAQKMVEFLQCTVPTRYKASQRLISQDIHSNTYNYKSTFSVEIVPICKDNVVCLSPKLAQSLGNMNQICVCIRVTSVIHLIDPNTLQVADIDGNTFWTHPFNSLCHPKQLEEFIVMECSIVRDLKRSAGAGMISKKHTLGEVWVQKTSEMNTDKQYFCRTHLGHLLNPGDLVLGFDLANCNLNDEHVNKMKSDRIPDVVLIKKNYDRTKRQRRRNWKLKELARDRENMDTDNERQYQDFLEDLEEDEAIRKNVNIYRDPTIPVESDTDDEGAPRISLAEMLEDLHISQDATGEEGELMMT", "length": 503, "header": "tr|A0A4X1VFP0-1|A0A4X1VFP0_PIG Isoform 1 of 60S ribosomal export protein NMD3 OS=Sus scrofa OX=9823 GN=NMD3 PE=3 SV=1 CANONICAL=A0A4X1VFP0-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VFP0-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFP0/entry", "sequence": { "sequence": "MEYMTESINRTPGHILCCDCGVPISPNPANICVACLRSKVDISQGIPKQVSISFCKQCQRYFQPPGTWIQCALESRELLALCLKKIKAPLSKVRLVDASFVWTEPHSKRLKVKLTIQKEVMNGAILQQVFVVDYVVQSQMCGDCHRVEAKDFWKAVVQVRQKTVHKKTFYYLEQLILKYGMHQNTLRIKEIHDGLDFYYSSKQHAQKMVEFLQCTVPTRYKASQRLISQDIHSNTYNYKSTFSVEIVPICKDNVVCLSPKLAQSLGNMNQICVCIRVTSVIHLIDPNTLQVADIDGNTFWTHPFNSLCHPKQLEEFIVMECSIVRDLKRSAGAGMISKKHTLGEVWVQKTSEMNTDKQYFCRTHLGHLLNPGDLVLGFDLANCNLNDEHVNKMKSDRIPDVVLIKKNYDRTKRQRRRNWKLKELARDRENMDTDNERQYQDFLEDLEEDEAIRKNVNIYRDPTIPVESDTDDEGAPRISLAEMLEDLHISQDATGEEGELMMT", "length": 503, "header": "tr|A0A4X1VFP0-1|A0A4X1VFP0_PIG Isoform 1 of 60S ribosomal export protein NMD3 OS=Sus scrofa OX=9823 GN=NMD3 PE=3 SV=1 CANONICAL=A0A4X1VFP0-1" }, "locus": { "chromosome": "13", "start_pos": 100955623, "end_pos": 100925423, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024911.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024911.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022048.4", "url": "https://www.ensembl.org/id/ENSSSCP00000022048.4" } ] } }, { "isoform_ac": "A0A5G2R1G4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1G4/entry", "sequence": { "sequence": "MEYMTESINRTPGHILCCDCGVPISPNPANICVACLRSKVDISQGIPKQVSISFCKQCQRYFQPPGTWIQCALESRELLALCLKKIKAPLSKVRLVDASFVWTEPHSKRLKVKLTIQKEVMNGAILQQVFVVDYVVQSQMCGDCHRVEAKDFWKAVVQVRQKTVHKKTFYYLEQLILKYGMHQNTLRIKEIHDGLDFYYSSKQHAQKMVEFLQCTVPTRYKASQRLISQDIHSNTYNYKSTFSVEIVPICKDNVVCLSPKLAQSLGNMNQICVCIRVTSVIHLIDPNTLQVADIDGNTFWTHPFNSLCHPKQLEEFIVMECSIVRDLKRSAGAGMISKKHTLGEVWVQKTSEMNTDKQYFCRTHLGHLLNPGDLVLGFDLANCNLNDEHVNKMKSDRIPDVVLIKKNYDRTKRQRRRNWKLKELARDRENMDTDNERQYQDFLEDLEEDEAIRKNVNIYRDPTIPVESDTDDEGAPRISLAEMLEDLHISQDATGEEARSAPGAAVVAKVT", "length": 511, "header": "tr|A0A5G2R1G4-1|A0A4X1VFP0_PIG Computationally mapped isoform of 60S ribosomal export protein NMD3 OS=Sus scrofa OX=9823 GN=NMD3 PE=3 SV=1 CANONICAL=A0A4X1VFP0-1" }, "locus": { "chromosome": "13", "start_pos": 100957409, "end_pos": 100925423, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087563.2", "url": "https://www.ensembl.org/id/ENSSSCT00000087563.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068042.2", "url": "https://www.ensembl.org/id/ENSSSCP00000068042.2" } ] } }, { "isoform_ac": "A0A8D1FED4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1FED4/entry", "sequence": { "sequence": "MEYMTESINRTPGHIYFQPPGTWIQCALESRELLALCLKKIKAPLSKVRLVDASFVWTEPHSKRLKVKLTIQKEVMNGAILQQVFVVDYVVQSQMCGDCHRVEAKDFWKAVVQVRQKTVHKKTFYYLEQLILKYGMHQNTLRIKEIHDGLDFYYSSKQHAQKMVEFLQCTVPTRYKASQRLISQDIHSNTYNYKSTFSVEIVPICKDNVVCLSPKLAQSLGNMNQICVCIRVTSVIHLIDPNTLQVADIDGNTFWTHPFNSLCHPKQLEEFIVMECSIVRDLKRSAGAGMISKKHTLGEVWVQKTSEMNTDKQYFCRTHLGHLLNPGDLVLGFDLANCNLNDEHVNKMKSDRIPDVVLIKKNYDRTKRQRRRNWKLKELARDRENMDTDNERQYQDFLEDLEEDEAIRKNVNIYRDPTIPVESDTDDEGAPRISLAEMLEDLHISQDATGEEGELMMT", "length": 458, "header": "tr|A0A8D1FED4-1|A0A4X1VFP0_PIG Computationally mapped isoform of 60S ribosomal export protein NMD3 OS=Sus scrofa OX=9823 GN=NMD3 PE=3 SV=1 CANONICAL=A0A4X1VFP0-1" }, "locus": { "chromosome": "13", "start_pos": 100955623, "end_pos": 100925423, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048423.3", "url": "https://www.ensembl.org/id/ENSSSCT00000048423.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047054.2", "url": "https://www.ensembl.org/id/ENSSSCP00000047054.2" } ] } }, { "isoform_ac": "A0A8D1U0C8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1U0C8/entry", "sequence": { "sequence": "MEYMTESINRTPGHILCCDCGVPISPNPANICVACLRSKVDISQGIPKQVSISFCKQCQRYFQPPGTWIQCALESRELLALCLKKIKAPLSKVRLVDASFVWTEPHSKRLKVKLTIQKEVMNGAILQQVFVVDYVVQSQMCGDCHRVEAKDFWKAVVQVRQKTVHKKTFYYLEQLILKYGMHQNTLRIKEIHDGLDFYYSSKQHAQKMVEFLQCTVPTRYKASQRLISQDIHSNTYNYKSTFSVEIVPICKDNVVCLSPKLAQSLGNMNQICVCIRVTSVIHLIDPNTLQVADIDGNTFWTHPFNSLCHPKQLEEFIVMECSIVRDLKRSAGAGMISKKHTLGEVWVQKTSEMNTDKQYFCRTHLGHLLNPGDLVLGFDLANCNLNDEHVNKMKSDRIPDVVLIKKNYDRTKRQRRRNWKLKELARDRENMDTDNERQYQDFLEDLEEDEAIRKNVNIYRDPTIPVESDTDDEGAPRISLAEMLEDLHISQDATGEEGELTRSAPGAAVV", "length": 510, "header": "tr|A0A8D1U0C8-1|A0A4X1VFP0_PIG Computationally mapped isoform of 60S ribosomal export protein NMD3 OS=Sus scrofa OX=9823 GN=NMD3 PE=3 SV=1 CANONICAL=A0A4X1VFP0-1" }, "locus": { "chromosome": "13", "start_pos": 100957394, "end_pos": 100925423, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065835.2", "url": "https://www.ensembl.org/id/ENSSSCT00000065835.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000040537.2", "url": "https://www.ensembl.org/id/ENSSSCP00000040537.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D1FED4", "url": "https://www.uniprot.org/uniprotkb/A0A8D1FED4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "B1WC44-1", "protein_name": "60S ribosomal export protein NMD3", "gene_name": "Nmd3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEYMTESVDRSPGHILCCECGVPISPNPANICVACLRSKVDISQGVPKQVSISFCKQCQRYFQPPASWVQCALESRELLALCLKKIKAPLSKVRLVDAGFVWTEPHSKRLKVKLTIQKEVMNGAILQQVFVVDYVVQSQMCGDCHRVEAKDFWKAVIQVRQKTLHKKTFYYLEQLILKYGMHQNTLRIKEIHDGLDFYYSSKQHAQKMVEFLQGTVPCRYKSSQRLISQDIHSNTYNYKSTFSVEIVPICKDNVVCLSPKLAQSLGNMNQICICIRVTSAIHLIDPNTLQVADIDGNTFWSHPFNSLCHPKQLEEFIVIECSIVRDLKRNAGAGVISKKHTLGEVWIQKTSEMDTDKQYFCRTHLGHLLNPGDLVLGFDLANCNLNDEHVNKMKSDRVPDVVLIKKSYDRTKRQRRRNWKLKELARDREDMDTDDERQYQDFLEDLEEDETIRKNVNIYRDSTVPVESDTDDEGAPRISLAEMLEDLRISQDATGEEGASMMS", "length": 503 }, "evidence": [ { "id": "A0A4X1VFP0", "url": "https://omabrowser.org/oma/group/A0A4X1VFP0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1BTL9-1", "protein_name": "60S ribosomal export protein NMD3", "gene_name": "NMD3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEYLAAPAAPTQGSILCCHCGVPIPPNPANMCVGCLRARVDITEGIPKQLSVSFCKQCERYLQPPGTWIQCALESRELLALCLKKIKASLSKVRLIDAGFIWTEPHSKRLKLKLTVQKEVINGAVLQQVFVVEYLIQSQMCEDCHRIEAKDFWKAVVQVRQKTLHKKTFYYLEQLILKHRLHQNTLRIKEIHDGLDFYYSSKQHAQKMVDFLQCTVPSRSKSSQRLTSHDVHSNVYNYKSTFSVEIVPVCKDNVVCLSPKLAQSLGNMSQICVCIRVTSTVHLIDPSTLQIAEIDGNTYWRHPFNSLFNPKQLEEFIVMDINRVQEKKKPAGAGARSNKHTLAEAWVKKTSELNTDHQYFCCTHLGHILNPGDLVLGFDLANCNLNDEFVNKMSPHNIPDVVLIKKSYDRAKRQHRRNWKLKELERDREGTDTDDERQYQDFLEDLEEDEAIRKNVNIYRNADIPVESDTDDDGAPRISLAEMLEDLHISEDATGGEGANMMTE", "length": 504 }, "evidence": [ { "id": "A0A4X1VFP0", "url": "https://omabrowser.org/oma/group/A0A4X1VFP0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "O46050-1", "protein_name": "60S ribosomal export protein NMD3", "gene_name": "Nmd3", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MDHEYVGVSPLGAADGKGAGSNAVILCCECGVAIQPNPANMCVTCLRNHVDITENIPKQAVLHFCRNCERYLQPPNEWIQAALESRELLAICLKKLKGLKEVKLVDAGFIWTEQHSKRIKVKLTVHGEIIGGTMLQQVFVVEFTVQNQMCNDCHRTEAKDFWRCLVQVRQRAENKKTFYYLEQLILKHKAHENTLGIKPEHGGLDFFYANDNHARRMVDFLLTMVPGKVTTSKRLISHDIHSNNYNYKYNWSVEIAPVSKDSAVCLSKKLRHQLGNLSPLVLVNRVSSSIHLIDPLTAQIAELTSQVYFRAPFEAVCNPKQLVEYVVMDIDVIMEKDRKTYPGQGQVSFKHALCDIWVVRASELGINDNPIHTRSHLGHLLKVGDSVMGYNTGEANINDLEFDKLSSDEIPDVILVRKHYDRQTRLSQRVWKIKHLAAEATDERSKYDYHEFLDDLEENEDIRGQVNIYRDTNKTIPIEVQAAGGDVPQITLEEMLEDMTLECADDEMGEEGGADDTEPQL", "length": 521 }, "evidence": [ { "id": "A0A4X1VFP0", "url": "https://omabrowser.org/oma/group/A0A4X1VFP0/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "P38861-1", "protein_name": "60S ribosomal export protein NMD3", "gene_name": "NMD3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MEFTPIDPHQHQNAATLLCCNCGTPIDGSTGLVMCYDCIKLTVDITQGIPREANISFCRNCERFLQPPGQWIRAELESRELLAICLRRLKGLTKVRLVDASFIWTEPHSRRIRIKLTVQGEAMTNTIIQQTFEVEYIVIAMQCPDCARSYTTNTWRATVQIRQKVPHKRTFLFLEQLILKHNAHVDTISISEAKDGLDFFYAQKNHAVKMIDFLNAVVPIKHKKSEELISQDTHTGASTYKFSYSVEIVPICKDDLVVLPKKLAKSMGNISQFVLCSKISNTVQFMDPTTLQTADLSPSVYWRAPFNALADVTQLVEFIVLDVDSTGISRGNRVLADITVARTSDLGVNDQVYYVRSHLGGICHAGDSVMGYFIANSNYNSDLFDGLNIDYVPDVVLVKKLYQRKSKKSRHWKLKRMAKEHKDIDASLDYNSRAQKQEMERAEKDYELFLQELEEDAELRQSVNLYKNREANVPPEEHEMDEDEDEDAPQINIDELLDELDEMTLEDGVENTPVESQQ", "length": 518 }, "evidence": [ { "id": "A0A4X1VFP0", "url": "https://omabrowser.org/oma/group/A0A4X1VFP0/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q08DS5-1", "protein_name": "60S ribosomal export protein NMD3", "gene_name": "NMD3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEYMTDPVKHTPGHILCCDCGVPISPNPANICVACLRSKVDISQGIPKQVSISFCKQCQRYFQPPGTWVQCALESRDLLALCLKKIKAPLSKVRLVDASFVWTEPHSKRLKVKLTIQKEVMNGAILQQVFVVDYVVQPQMCGDCHRVEAKDFWKAVVQVRQKTLHKKTFYYLEQLILKYGMHQNTLRIKEIHDGLDFYYSSKQHAQKMVEFLQCTVPTRYKASQRLISQDIHSNTYNYKSTFSVEIVPICKDNVVCLSPKLAQSLGNMNQICVCIRVTSVIHLIDPNTLQVADIDGNTFWSHPFNSLCHPKQLEEFIVMECSIVQDIKRSAGAGMISKKHTLGEVWVQKTSEMNTDKQYFCRTHLGHLLNPGDLVLGFDLVNCNLNDEHVNKMKSDRVPDVVLIKKSYDRTRRQRRRNWKLKELARDRENTDTDDERQYQDFLEDLEEDEAIRKNVNIYRDSTIPVESDTDDEGAPRISLAEMLEDLHISQDATGGEGESMMT", "length": 503 }, "evidence": [ { "id": "A0A4X1VFP0", "url": "https://omabrowser.org/oma/group/A0A4X1VFP0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q55BF2-1", "protein_name": "60S ribosomal export protein NMD3", "gene_name": "nmd3", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEYIPQVKQANILCCMCGVLIPANPSNMCVDCIKSQVDITEGIPKQLTIQWCRGCARYLQPPNHWAIAELESRELLTICIKRIKGLNKVKLVDAGWVWTEPHSKRLKVKLTIQKEVFTSAILQQIFIIEFIVQGQQCDKCQKFEAKDTWNSVVQLRQKVDHKRTFLYIEQLILKHNAHSQTLNIKEKPDGLDFFFSNRNHAMKFVEFISAITPVKTKKSEQLISSDEQNNAANYKYTFSVEIVPLSKDDIVCLPPKIAHQLGNMGPLVVVTKVSNLIHFIDPNTLHTGEISALTFWNSPFRALSSYKQLVEFTVLDVNLTGATRGRYALSDIQLMRSADFGANDNIYDIRSHLGNILNPGDLALGYDVASSNFPDSDLAGMKKNQQLPDFVLVKKTYPSKNDFRFKRHWYFKEIPKEGIENPKKFEIDQMERDREEFLREIEADPELRSKINIYKEADAANILQQRIKKMQEHGIDEDAIKEELALDGLLDDMVNNLTINDEEFEDEEDQEGEDDDEEYDDEDEDDDMME", "length": 530 }, "evidence": [ { "id": "A0A4X1VFP0", "url": "https://omabrowser.org/oma/group/A0A4X1VFP0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q5BLF0-1", "protein_name": "60S ribosomal export protein NMD3", "gene_name": "nmd3", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEYMQAPPSSSHGNILCCTCGVPIPPNPANMCVSCLRTQVDISEGIPKQVTIHFCRQCERYLQPPGSWVQCALESRELLALCLKKLKASMSKVRLIDAGFLWTEPHSKRIKIKLTIQKEVMNGAILQQVFTVEFVVQGQMCEDCHRVEAKDFWKAVVQVRQKTVHKKTFYYLEQLILKHKLHQNTVRIKEIHEGIDFYYATKQHAQKMVDFLQCTVPCRSKASQRLISHDVHSNTYNYKSTFSVEIVPVCKDNVVCLSPRLAQSLGNMGQVCVCVRVTSSIHLIDPNTLQIAEVDGSTFWRHPFNSLCSPRQLEEFIIMDIDIIRDQRLGAGAGLKSNKHTLAEVWVQKTSEMDSSHQYHCRTFMGHLLNIGDLVLGFDFANANINDEFLNKMNPQHVPDVVLIKKSYDRMKRARKRVWKLKEMDREKDAADTDDERQYTEFLEDLEEDEMLRKNINIFRDASKIPVEESDTDDDGAPRISLAEMLEDLSLSDATGGEGADMMTD", "length": 505 }, "evidence": [ { "id": "A0A4X1VFP0", "url": "https://omabrowser.org/oma/group/A0A4X1VFP0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q96D46-1", "protein_name": "60S ribosomal export protein NMD3", "gene_name": "NMD3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEYMAESTDRSPGHILCCECGVPISPNPANICVACLRSKVDISQGIPKQVSISFCKQCQRYFQPPGTWIQCALESRELLALCLKKIKAPLSKVRLVDAGFVWTEPHSKRLKVKLTIQKEVMNGAILQQVFVVDYVVQSQMCGDCHRVEAKDFWKAVIQVRQKTLHKKTFYYLEQLILKYGMHQNTLRIKEIHDGLDFYYSSKQHAQKMVEFLQCTVPCRYKASQRLISQDIHSNTYNYKSTFSVEIVPICKDNVVCLSPKLAQSLGNMNQICVCIRVTSAIHLIDPNTLQVADIDGSTFWSHPFNSLCHPKQLEEFIVMECSIVQDIKRAAGAGMISKKHTLGEVWVQKTSEMNTDKQYFCRTHLGHLLNPGDLVLGFDLANCNLNDEHVNKMNSDRVPDVVLIKKSYDRTKRQRRRNWKLKELARERENMDTDDERQYQDFLEDLEEDEAIRKNVNIYRDSAIPVESDTDDEGAPRISLAEMLEDLHISQDATGEEGASMLT", "length": 503 }, "evidence": [ { "id": "A0A4X1VFP0", "url": "https://omabrowser.org/oma/group/A0A4X1VFP0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q99L48-1", "protein_name": "60S ribosomal export protein NMD3", "gene_name": "Nmd3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEYMAESIEHSPGHILCCECGVPISPNPANICVACLRSKVDISQGVPKQVSISFCKQCQRYFQPPASWVQCALESRELLALCLKKIKAPLSKVRLVDAGFVWTEPHSKRLKVKLTIQKEVMNGAILQQVFVVDYVVQSQMCGDCHRVEAKDFWKAVIQVRQKTLHKKTFYYLEQLILKYGMHQNTLRIKEIHDGLDFYYSSKQHAQKMVEFLQGIVPCRYKASQRLISQDIHSNTYNYKSTFSVEIVPICKDNVVCLSPKLAQSLGNMSQICICIRVTSAIHLIDPNTLQVADIDGNTFWSHPFNSLCHPKQLEEFIVIECSTVRDLKRSAGAGVISKKHTLGEVWIQKTSEMNTDKQYFCRTHLGHLLNPGDLVLGFDLANCNLNDEYVNKMNSDRVPDVVLIKKSYDRTKRQRRRNWKLKELARDRENMDTDDERQYQDFLEDLEEDEAIRKHVNIYRDATIPVESDTDDEGAPRISLAEMLEDLHISQDATGEEGASMMS", "length": 503 }, "evidence": [ { "id": "A0A4X1VFP0", "url": "https://omabrowser.org/oma/group/A0A4X1VFP0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9SI58-1", "protein_name": "60S ribosomal export protein NMD3", "gene_name": "NMD3", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSVMDESGMFNVQQTIGSVLCCKCGVPMAPNAANMCVNCLRSEVDITEGLQKSIQIFYCPECTCYLQPPKTWIKCQWESKELLTFCIKRLKNLNKVKLKNAEFVWTEPHSKRIKVKLTVQAEVLNGAVLEQSYPVEYTVRDNLCESCSRFQANPDQWVASIQLRQHVSHRRTFFYLEQLILRHDAASRAIRIQQVDQGIDFFFGNKSHANSFVEFLRKVVPIEYRQDQQLVSHDVKSSLYNYKYTYSVKICPVCREDLVCLPSKVASGLGNLGPLVVCTKVSDNITLLDPRTLRCAFLDARQYWRSGFRSALTSRQLVKYFVFDVEPPVGEATVGGQKYALSYVQIARESDIGKMFYVQTHLGHILKPGDQALGYDIYGANVNDNEMEKYRLSVKNGLPEAILIKKCYEEQRERKQKKSRNWKLKSLPMEMDDSRGRVDPEKTDKEYEEFLRDLEENPELRFNISLYRDKDYQASETASMTDGEGAPSVPIEELLADLDLSFEEEDDDDEDDMAAE", "length": 516 }, "evidence": [ { "id": "A0A4X1VFP0", "url": "https://omabrowser.org/oma/group/A0A4X1VFP0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VFP0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFP0" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VFP0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFP0" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VFP0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFP0" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VFP0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFP0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "protein transport", "id": "GO:0015031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015031", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VFP0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFP0" } ], "pmid": "" }, { "name": "ribosomal large subunit export from nucleus", "id": "GO:0000055", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000055", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VFP0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFP0" } ], "pmid": "" }, { "name": "positive regulation of RNA biosynthetic process", "id": "GO:1902680", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902680", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VFP0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFP0" } ], "pmid": "" }, { "name": "positive regulation of protein localization to nucleolus", "id": "GO:1904751", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1904751", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VFP0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFP0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "ribosomal large subunit binding", 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1VGK3-1", "uniprot_ac": "A0A4X1VGK3", "uniprot_id": "A0A4X1VGK3_PIG", "mass": { "chemical_mass": 35661.0, "monoisotopic_mass": 35661.0 }, "refseq": { "ac": "XP_001927515", "name": "8-oxo-dGDP phosphatase NUDT18", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001927515" }, "gene_names": [ { "name": "NUDT18", "type": "recommended", "evidence": [ { "id": "A0A4X1VGK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3" } ] }, { "name": "NUDT18", "type": "synonym", "evidence": [ { "id": "XP_001927515", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001927515" } ] } ], "protein_names": [ { "name": "8-oxo-dGDP phosphatase NUDT18", "type": "recommended", "evidence": [ { "id": "A0A4X1VGK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3/entry#names_and_taxonomy" } ] }, { "name": "2-hydroxy-dADP phosphatase", "type": "synonym", "evidence": [ { "id": "A0A4X1VGK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3/entry#names_and_taxonomy" } ] }, { "name": "3.6.1.58", "type": "synonym", "evidence": [ { "id": "A0A4X1VGK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3/entry#names_and_taxonomy" } ] }, { "name": "3.6.1.68", "type": "synonym", "evidence": [ { "id": "A0A4X1VGK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3/entry#names_and_taxonomy" } ] }, { "name": "3.6.1.76", "type": "synonym", "evidence": [ { "id": "A0A4X1VGK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3/entry#names_and_taxonomy" } ] }, { "name": "7,8-dihydro-8-oxoguanine phosphatase", "type": "synonym", "evidence": [ { "id": "A0A4X1VGK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3/entry#names_and_taxonomy" } ] }, { "name": "8-oxo-dGDP phosphatase NUDT18", "type": "synonym", "evidence": [ { "id": "XP_001927515", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001927515" } ] }, { "name": "Nucleoside diphosphate-linked moiety X motif 18", "type": "synonym", "evidence": [ { "id": "A0A4X1VGK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Mediates the hydrolysis of oxidized nucleoside diphosphate derivatives. Hydrolyzes 8-oxo-7,8-dihydroguanine (8-oxo-Gua)-containing deoxyribo- and ribonucleoside diphosphates to the monophosphates. Hydrolyzes 8-oxo-dGDP and 8-oxo-GDP with the same efficiencies. Also hydrolyzes 8-OH-dADP and 2-OH-dADP. Exhibited no or minimal hydrolysis activity against 8-oxo-dGTP, 8-oxo-GTP, dGTP, GTP, dGDP and GDP. Probably removes oxidized guanine nucleotides from both the DNA and RNA precursor pools. In vitro, it catalyzes the hydrolysis of isoprene pyrophosphates, including (2E)-geranyl diphosphate, isopentenyl diphosphate, (2E,6E)-farnesyl diphosphate and dimethylallyl diphosphate. It may therefore play a role in the control of cellular levels of these metabolites that are essential for multiple cellular processes, including isoprenoids synthesis and protein isoprenylation.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VGK3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3#function" }, { "database": "UniProtKB", "id": "ARBA00094334", "url": "https://www.uniprot.org/uniprotkb/ARBA00094334#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VGK3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NUDT18", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3", "locus": { "chromosome": "14", "start_pos": 6377815, "end_pos": 6381596, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000009615", "url": "https://www.ensembl.org/id/ENSSSCG00000009615" } ] } } ], "crossref": [ { "id": "A0A4X1VGK3", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VGK3", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd04671", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04671", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100156061", "url": "https://www.ncbi.nlm.nih.gov/gene/100156061", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000086", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000086", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015797", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015797", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020084", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020084", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020476", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020476", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042970", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042970", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100156061", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156061", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FPTCEIN", "url": "https://omabrowser.org/oma/group/FPTCEIN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VGK3", "url": "https://www.orthodb.org/?gene=A0A4X1VGK3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR22769", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22769", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22769:SF56", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22769:SF56", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00293", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00293", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-2393930", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2393930", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_001927515", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001927515", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "32063", "url": "https://www.rhea-db.org/rhea/32063", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "35219", "url": "https://www.rhea-db.org/rhea/35219", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "35223", "url": "https://www.rhea-db.org/rhea/35223", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "47944", "url": "https://www.rhea-db.org/rhea/47944", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "48128", "url": "https://www.rhea-db.org/rhea/48128", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "62356", "url": "https://www.rhea-db.org/rhea/62356", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "68008", "url": "https://www.rhea-db.org/rhea/68008", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "70503", "url": "https://www.rhea-db.org/rhea/70503", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "70507", "url": "https://www.rhea-db.org/rhea/70507", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "82355", "url": "https://www.rhea-db.org/rhea/82355", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1VGK3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VGK3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASEGLAGALAAVLGGRGLRVQSCDSKPAGEPLAPVRLRKNVCYVVLAVFLNEQDEVLLVQEAKKECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPLTLLSLEERGPSWIRFVFLARPTGGILKTSKEADAESLQAGWYPRTSLPTPLRAHDILHLVELAVQYRQQARHPLILPQELPCSLICQRLVATFTSVQTVWVLVGTVGMPHLPITACGFAPMDQRGGIKMAVLRLLQECLTLHHLAVETKGLLGLQHLGRDQTDGICLNVLVTVAFRNPGIQNEPPKVRGENFFWWKVEEDLQSQLLQRLQESSVVPINR", "length": 322, "header": "tr|A0A4X1VGK3-1|A0A4X1VGK3_PIG Isoform 1 of 8-oxo-dGDP phosphatase NUDT18 OS=Sus scrofa OX=9823 GN=NUDT18 PE=3 SV=1 CANONICAL=A0A4X1VGK3-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VGK3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3/entry", "sequence": { "sequence": "MASEGLAGALAAVLGGRGLRVQSCDSKPAGEPLAPVRLRKNVCYVVLAVFLNEQDEVLLVQEAKKECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPLTLLSLEERGPSWIRFVFLARPTGGILKTSKEADAESLQAGWYPRTSLPTPLRAHDILHLVELAVQYRQQARHPLILPQELPCSLICQRLVATFTSVQTVWVLVGTVGMPHLPITACGFAPMDQRGGIKMAVLRLLQECLTLHHLAVETKGLLGLQHLGRDQTDGICLNVLVTVAFRNPGIQNEPPKVRGENFFWWKVEEDLQSQLLQRLQESSVVPINR", "length": 322, "header": "tr|A0A4X1VGK3-1|A0A4X1VGK3_PIG Isoform 1 of 8-oxo-dGDP phosphatase NUDT18 OS=Sus scrofa OX=9823 GN=NUDT18 PE=3 SV=1 CANONICAL=A0A4X1VGK3-1" }, "locus": { "chromosome": "14", "start_pos": 6381557, "end_pos": 6379418, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000010538.4", "url": "https://www.ensembl.org/id/ENSSSCT00000010538.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000010262.3", "url": "https://www.ensembl.org/id/ENSSSCP00000010262.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VGK3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100156061", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156061", "resource": "KEGG Pathway" }, { "id": "R-SSC-2393930", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2393930", "resource": "Reactome", "description": "Phosphate bond hydrolysis by NUDT proteins" } ], "orthologs": [ { "uniprot_canonical_ac": "G3GUX5-1", "protein_name": "8-oxo-dGDP phosphatase NUDT18", "gene_name": "Nudt18", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASEGLTGALATVLGGKGLLVQSCDSEPAGKPLSPVRLRKNVCYVVLAVFLNEQDEVLMIQEAKKECRGAWYLPAGRMESGETIVEAMQREVKEETGLLCEPVTLLSVEERGACWIRFVFLARPTGGVLKTSKDADAESLQAGWYPRVSLPTPLRAHDVLHLVELGAKFCQQAMHPLILPQELPCSVVCQRLVAAFTTVQSVWVLASTVGTPHLPITGCGFGSMEQRGGIKVATLRLLQECLTLNNLAVETKGLLGLQHLGKNHVDGLCLNVLVMVAFRIPGIEDEPPKIRGENYFWWEVLEEDLQKQLLHRLQESSVIPLSR", "length": 323 }, "evidence": [ { "id": "A0A4X1VGK3", "url": "https://omabrowser.org/oma/group/A0A4X1VGK3/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q3U2V3-1", "protein_name": "8-oxo-dGDP phosphatase NUDT18", "gene_name": "Nudt18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATEGLAGALATVLGGKGLLVQSCDSEPAGKPLFPVRLRKNVCYVVLAVFLNEQDEVLMIQEAKRECRGTWYLPAGRMEPGETIVEAMQREVKEEAGLLCEPVTLLSVEERGASWIRFVFLARPTGGVLKTSKDADSESLQAGWYPRVSLPTPLRAHDVLHLVELGAKFCQQAMHPLILPQELPCSVVCQRLVTTFTTVQSVWVLVGTVGTPHLPITACGFTPMEQRGGIKVAILRLLQECLTLHSLAVETKGLLGLQHLGRDHVDGVCLNVLVTVAFRNPGIQDEPPKIRGENYFWWKVLEEDLQKLLLYRLQESSVIPLSR", "length": 323 }, "evidence": [ { "id": "A0A4X1VGK3", "url": "https://omabrowser.org/oma/group/A0A4X1VGK3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q568Q0-1", "protein_name": "8-oxo-dGDP phosphatase NUDT18", "gene_name": "nudt18", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDSQSSILEENLEKILRGEGLEFDSVAEQVDPVTLRKNVCYIVGAVIFNSKEEVLMVQEAKRECYGRWYLPAGRMEECESILEALQREVREEAGIDCQPITLLLVQEQGPRWVRFIFLAEETGGSLKTTAEADDESLQAHWWDRKSPLPLRAHDILSLIDAGLKYRRNPWFPVTQPVDFPCHVVCQRLFLTFISSRADADDRLWLLMSNNNTSHHPRLPIVVSFRTYISKAVSKLIEDCMPSSYISVHIRGILGVQHNGRIPGKTDGICFNTLVLLENTEEGAEIGSPPSLETDCYRWQEVTNQGLKAKIIERIKDGSVLPFQSL", "length": 325 }, "evidence": [ { "id": "A0A4X1VGK3", "url": "https://omabrowser.org/oma/group/A0A4X1VGK3/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q641Y7-1", "protein_name": "8-oxo-dGDP phosphatase NUDT18", "gene_name": "Nudt18", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MATEGLAGALATVLGGKGLLVQSCDSEPAGKPLLPVRLRKNVCYVVLAVFLNEQDEVLMIQEAKRECRGTWYLPAGRMEPGETIVEAMQREVKEEAGLLCEPVTLLSVEERGASWIRFVFLARPTGGVLKTSKNADSESLQAGWYPRVSLPTPLRAHDVVHLVELGAKFCQQATHPLILPQELPCNMVCQRLVATFTTVQSVWVLVGTVGTPHLPITACGFTPMEQRGGIKVAILRLLQECLTLHSLAVETKGLLGLQHLGRDHVDGICLNVLVTVAFRNPGIQDEPPKIRGENYFWWKVLEEDLQKQLLHRLQESSVVPLTR", "length": 323 }, "evidence": [ { "id": "A0A4X1VGK3", "url": "https://omabrowser.org/oma/group/A0A4X1VGK3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6ZVK8-1", "protein_name": "8-oxo-dGDP phosphatase NUDT18", "gene_name": "NUDT18", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASEGLAGALASVLAGQGSSVHSCDSAPAGEPPAPVRLRKNVCYVVLAVFLSEQDEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLSVEERGPSWVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPTPLRAHDILHLVELAAQYRQQARHPLILPQELPCDLVCQRLVATFTSAQTVWVLVGTVGMPHLPVTACGLDPMEQRGGMKMAVLRLLQECLTLHHLVVEIKGLLGLQHLGRDHSDGICLNVLVTVAFRSPGIQDEPPKVRGENFSWWKVMEEDLQSQLLQRLQGSSVVPVNR", "length": 323 }, "evidence": [ { "id": "A0A4X1VGK3", "url": "https://omabrowser.org/oma/group/A0A4X1VGK3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VGM4-1", "protein_name": "Nudix hydrolase domain-containing protein", "gene_name": "Dmel\\CG10898", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MASIVEKVRRILDSKDLGDITTELCDFSLKEQNATAEAQGVQPSSASDFVPILGQTVTYIVACVLINEHDELLMIEEAKQSCAGKWYLPAGRMERGESITEAAAREVFEETGLNAELTTLLAVEAAGGSWFRFVLTGRITGGRLKTPADADAESIQARWVRNPKEVPLRANDILSIIEIGRAYHQGQKIAISPSPWHGTILPTRFAHKRNYLRVLAVARKRAHNSLNILVSEKNAHHFPTVELHPNRSLHSTLRKFMIEIFGAELPQHRPHGLLSVEHSASEQENTDGICLNLLVAFRPPLEEISLIGKCIWQELGAPLDEMLGRIVSSKNASIPLNVVR", "length": 340 }, "evidence": [ { "id": "A0A4X1VGK3", "url": "https://omabrowser.org/oma/group/A0A4X1VGK3/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "8-oxo-dGDP phosphatase activity", "id": "GO:0044715", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0044715", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VGK3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3" } ], "pmid": "" }, { "name": "8-oxo-GDP phosphatase activity", "id": "GO:0044716", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0044716", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VGK3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3" } ], "pmid": "" }, { "name": "8-hydroxy-dADP phosphatase activity", "id": "GO:0044717", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0044717", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VGK3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VGK3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3" } ], "pmid": "" }, { "name": "isoprenoid diphosphate phosphatase activity", "id": "GO:0106405", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106405", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VGK3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "dADP catabolic process", "id": "GO:0046057", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046057", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VGK3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3" } ], "pmid": "" }, { "name": "dGDP catabolic process", "id": "GO:0046067", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046067", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VGK3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3" } ], "pmid": "" }, { "name": "GDP catabolic process", "id": "GO:0046712", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046712", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VGK3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VGK3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VGK3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGK3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "32063", "name": "", "equation": "8-oxo-dGDP + H2O = 8-oxo-dGMP + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "32063", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/32063" } ] }, { "id": "35219", "name": "", "equation": "8-oxo-dADP + H2O = 8-oxo-dAMP + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "35219", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/35219" } ] }, { "id": "35223", "name": "", "equation": "2-oxo-dADP + H2O = 2-oxo-dAMP + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "35223", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/35223" } ] }, { "id": "47944", "name": "", "equation": "(2E)-geranyl diphosphate + H2O = (2E)-geranyl phosphate + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "47944", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/47944" } ] }, { "id": "48128", "name": "", "equation": "(2E,6E)-farnesyl diphosphate + H2O = (2E,6E)-farnesyl phosphate + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "48128", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/48128" } ] }, { "id": "62356", "name": "", "equation": "8-oxo-GDP + H2O = 8-oxo-GMP + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "62356", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/62356" } ] }, { "id": "68008", "name": "", "equation": "(2E,6E,10E)-geranylgeranyl diphosphate + H2O = (2E,6E,10E)-geranylgeranyl phosphate + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "68008", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/68008" } ] }, { "id": "70503", "name": "", "equation": "isopentenyl diphosphate + H2O = isopentenyl phosphate + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "70503", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/70503" } ] }, { "id": "70507", "name": "", "equation": "dimethylallyl diphosphate + H2O = dimethylallyl phosphate + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "70507", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/70507" } ] }, { "id": "82355", "name": "", "equation": "(R)-5-diphosphomevalonate + H2O = (R)-5-phosphomevalonate + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "82355", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/82355" } ] }, { "id": "R-SSC-2395873", "name": "NUDT18 hydrolyses 8-oxo-GDP to 8-oxo-GMP", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [ "R-ALL-9731304" ], "output_participant_list": [ "R-ALL-9731298" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-2395873", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2395873" } ] }, { "id": "R-SSC-2395879", "name": "NUDT18 hydrolyses 8-oxo-dGDP to 8-oxo-dGMP", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-2395879", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2395879" } ] }, { "id": "R-SSC-2395965", "name": "NUDT18 hydrolyses 8-oxo-dADP to 8-oxo-dAMP", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. 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"Protein" ] }, { "id": "I3LJX8-1", "url": "https://www.uniprot.org/uniprotkb/I3LJX8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MISLPGSPATNLLQFLFLGLTTLASPSRAQLELHVPAGLTKLQAVEGAEVVLPAWYTLQGEVSSTKPKPWEVLTVMWFIKEGNGLNQVLSYIGGATSSNSGVSLVYSMPSRNVSLRLQGLQEKDSGSYLCSVNVQDSQGTDRGHSTNTLELNVLVPPAPPSCHLQGVPRVGTNVTLSCQSPRSKPTAQYQWVRSPPSSQVFFAPVLDAIHGSLSLKNLSTSMSGVYICKAHNEVGSAQCNVTLEVSTGPGATVVAGAVVGTLVGLGLLAGSVLLYHHRVKALEEPANDIKEDAVAPRTLPWPKGSDTISKNGTLSSVTSARALRPPQGPSRPGALTPTSSLSSQVLPSPRLPRMDGAHPQPISPSPGGVSSSALSRMGAVPVMVPAQSQAGSLV", "length": 394, "header": "tr|A0A4X1VH14-1|A0A4X1VH14_PIG Isoform 1 of Endothelial cell adhesion molecule OS=Sus scrofa OX=9823 GN=ESAM PE=1 SV=1 CANONICAL=A0A4X1VH14-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VH14-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH14/entry", "sequence": { "sequence": 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"https://www.uniprot.org/uniprotkb/A0A8W4FN99/entry", "sequence": { "sequence": "MISLPGSPATNLLQFLFLGLTTLASPSRAQLELHVPAGLTKLQAVEGAEVVLPAWYTLQGEVSSTKPKPWEVLTVMWFRKGMVNQVLSYIGGATSSNSGVSLVYSMPSRNVSLRLQGLQEKDSGSYLCSVNVQDSQGTDRGHSTNTLELNVLVPPAPPSCHLQGVPRVGTNVTLSCQSPRSKPTAQYQWVRSPPSSQVFFAPVLDAIHGSLSLKNLSTSMSGVYICKAHNEVGSAQCNVTLEVSTGPGATVVAGAVVGTLVGLGLLAGSVLLYHHRVKALEEPANDIKEDAVAPRTLPWPKGSDTISKNGTLSSVTSARALRPPQGPSRPGALTPTSSLSSQVLPSPRLPRMDGAHPQPISPSPGGVSSSALSRMGAVPVMVPAQSQAGSLV", "length": 392, "header": "tr|A0A8W4FN99-1|A0A4X1VH14_PIG Computationally mapped isoform of Endothelial cell adhesion molecule OS=Sus scrofa OX=9823 GN=ESAM PE=1 SV=1 CANONICAL=A0A4X1VH14-1" }, "locus": { "chromosome": "9", "start_pos": 51992249, "end_pos": 51983552, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093897.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093897.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080676.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080676.1" } ] } }, { "isoform_ac": "I3LJX8-1", "url": "https://www.uniprot.org/uniprotkb/I3LJX8/entry", "sequence": { "sequence": "MISLPGSPATNLLQFLFLGLTTLASPSRAQLELHVPAGLTKLQAVEGAEVVLPAWYTLQGEVSSTKPKPWEVLTVMWFIKEGNGLNQVLSYIGGATSSNSGVSLVYSMPSRNVSLRLQGLQEKDSGSYLCSVNVQDSQGTDRGHSTNTLELNVLVPPAPPSCHLQGVPRVGTNVTLSCQSPRSKPTAQYQWVRSPPSSQVFFAPVLGPGATVVAGAVVGTLVGLGLLAGSVLLYHHRVKALEEPANDIKEDAVAPRTLPWPKGSDTISKNGTLSSVTSARALRPPQGPSRPGALTPTSSLSSQVLPSPRLPRMDGAHPQPISPSPGGVSSSALSRMGAVPVMVPAQSQAGSLV", "length": 353, "header": "tr|I3LJX8-1|A0A4X1VH14_PIG Computationally mapped isoform of Endothelial cell adhesion molecule OS=Sus scrofa OX=9823 GN=ESAM PE=1 SV=2 CANONICAL=A0A4X1VH14-1" }, "locus": { "chromosome": "9", "start_pos": 51992249, "end_pos": 51983552, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023865.2", "url": "https://www.ensembl.org/id/ENSSSCT00000023865.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024390.2", "url": "https://www.ensembl.org/id/ENSSSCP00000024390.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LJX8", "url": "https://www.uniprot.org/uniprotkb/I3LJX8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100522817", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522817", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q6AYD4-1", "protein_name": "Endothelial cell-selective adhesion molecule", "gene_name": "Esam", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MILPARTPETSLLRVLFLGLSTLAAFSLAQMELHVPPGLNKLEAVEGEEVVLPAWYTMAREESSSHPWEAPFLIWFLEQEGKEPKQVLSYFKGSLSNKPGVTLVHSISTRNVSLRLDALQEGDSGTYRCSVNAYDSDGKNIGHSIKTIELKVLVPPAPPSCSFQGVPYVGTNVTLNCKSPRSKPTAQYQWERLAPSSQVFFGPALDTVRGSLKLTNISTAMSGVYVCKAQNRVGFAQCNVTLDVMTGSKAAVVAGAVVGTFVGLVLIAGLVLLYQRRSKTLEELANDIKEDAIAPRTLPWTKGSDTISKNGTLSSVTSARALRPPKAAPPRPGTFTPTPSVSSQALSSPRLPRTDGPPPQAVSLTPGGVSSSTLNRMGAVPVMVPAQSQAGSLV", "length": 394 }, "evidence": [ { "id": "A0A4X1VH14", "url": "https://omabrowser.org/oma/group/A0A4X1VH14/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], 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"https://www.uniprot.org/uniprotkb/A0A5G2QRP8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASEMESSLEASFSSSGAVSGASVFLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDEERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLKSHKPLMLSQPPDDGVILKPEPKPAMTCWC", "length": 229, "header": "tr|A0A4X1VH23-1|A0A4X1VH23_PIG Isoform 1 of small monomeric GTPase OS=Sus scrofa OX=9823 GN=RAB33B PE=1 SV=1 CANONICAL=A0A4X1VH23-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VH23-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH23/entry", "sequence": { "sequence": "MASEMESSLEASFSSSGAVSGASVFLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDEERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLKSHKPLMLSQPPDDGVILKPEPKPAMTCWC", "length": 229, "header": "tr|A0A4X1VH23-1|A0A4X1VH23_PIG Isoform 1 of small monomeric GTPase OS=Sus scrofa OX=9823 GN=RAB33B PE=1 SV=1 CANONICAL=A0A4X1VH23-1" }, "locus": { "chromosome": "8", "start_pos": 87569850, "end_pos": 87547495, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023933.2", "url": "https://www.ensembl.org/id/ENSSSCT00000023933.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024500.1", "url": "https://www.ensembl.org/id/ENSSSCP00000024500.1" } ] } }, { "isoform_ac": "A0A5G2QRP8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QRP8/entry", "sequence": { "sequence": "MASEMESSLEASFSSSGAVSGASVFLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEIDEERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLKSHKPLMLSQPPDDGVILKPEPKPAMTCWC", "length": 216, "header": "tr|A0A5G2QRP8-1|A0A4X1VH23_PIG Computationally mapped isoform of small monomeric GTPase OS=Sus scrofa OX=9823 GN=RAB33B PE=1 SV=1 CANONICAL=A0A4X1VH23-1" }, "locus": { "chromosome": "8", "start_pos": 87569850, "end_pos": 87547495, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080569.2", "url": "https://www.ensembl.org/id/ENSSSCT00000080569.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064701.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064701.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QRP8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QRP8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100626608", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100626608", "resource": "KEGG Pathway" }, { "id": "R-SSC-6811438", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6811438", "resource": "Reactome", "description": "Intra-Golgi traffic" }, { "id": "R-SSC-8854214", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8854214", "resource": "Reactome", "description": "TBC/RABGAPs" } ], "orthologs": [ { "uniprot_canonical_ac": "F1LW77-1", "protein_name": "small monomeric GTPase", "gene_name": "Rab33b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASEMESSLEVSFSSSCAVSGASGCLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLKSHKPLMLSQLPDNRISLKPETKPAVTCWC", "length": 229 }, "evidence": [ { "id": "A0A4X1VH23", "url": "https://omabrowser.org/oma/group/A0A4X1VH23/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3HAT4-1", "protein_name": "small monomeric GTPase", "gene_name": "Rab33b", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASEMESSLEVSFSSSCAVSGASGCLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLKSHKPLMLSQPPDNRINLKPETKPAVPCWC", "length": 229 }, "evidence": [ { "id": "A0A4X1VH23", "url": "https://omabrowser.org/oma/group/A0A4X1VH23/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "O35963-1", "protein_name": "Ras-related protein Rab-33B", "gene_name": "Rab33b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTSEMESSLEVSFSSSCAVSGASGCLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLKSHKPLMLSQLPDNRISLKPETKPAVTCWC", "length": 229 }, "evidence": [ { "id": "A0A4X1VH23", "url": "https://omabrowser.org/oma/group/A0A4X1VH23/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5ZHV1-1", "protein_name": "Ras-related protein Rab-33B", "gene_name": "RAB33B", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAELESSLELSFTGSGTVPGGGLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPQRTEATIGVDFRERAVTIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNLASFHSLPSWIEECKQHLLTNDIPRILVGNKCDLRNAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLKSHKPLMLSQPPDRDQIHIKPEPKPAMTCWC", "length": 228 }, "evidence": [ { "id": "A0A4X1VH23", "url": "https://omabrowser.org/oma/group/A0A4X1VH23/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q9H082-1", "protein_name": "Ras-related protein Rab-33B", "gene_name": "RAB33B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAEEMESSLEASFSSSGAVSGASGFLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLKSHKPLMLSQPPDNGIILKPEPKPAMTCWC", "length": 229 }, "evidence": [ { "id": "A0A4X1VH23", "url": "https://omabrowser.org/oma/group/A0A4X1VH23/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 10, "go_terms": [ { "name": "autophagosome assembly", "id": "GO:0000045", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000045", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH23", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH23" } ], "pmid": "" }, { "name": "protein localization to phagophore assembly site", "id": "GO:0034497", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034497", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH23", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH23" } ], "pmid": "" }, { "name": "skeletal system morphogenesis", "id": "GO:0048705", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048705", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH23", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH23" } ], "pmid": "" }, { "name": "protein localization to Golgi apparatus", "id": "GO:0034067", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034067", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH23", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH23" } ], "pmid": "" }, { "name": "regulation of retrograde vesicle-mediated transport, Golgi to ER", "id": "GO:2000156", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000156", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH23", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH23" } ], "pmid": "" }, { "name": "Rab protein signal transduction", "id": "GO:0032482", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032482", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH23", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH23" } ], "pmid": "" }, { "name": "negative regulation of constitutive secretory pathway", "id": "GO:1903434", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1903434", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH23", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH23" } ], "pmid": "" }, { "name": "intra-Golgi vesicle-mediated transport", "id": "GO:0006891", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006891", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH23", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH23" } ], "pmid": "" }, { "name": "regulation of exocytosis", "id": "GO:0017157", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017157", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH23", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH23" } ], "pmid": "" }, { "name": "regulation of Golgi organization", "id": "GO:1903358", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1903358", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH23", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH23" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH23", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH23" } ], "pmid": "" }, { "name": "endosome", "id": "GO:0005768", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005768", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH23", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH23" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH23", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH23" } ], "pmid": "" }, { "name": "Golgi lumen", "id": "GO:0005796", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005796", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH23", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH23" } ], "pmid": "" }, { "name": "phagophore assembly site membrane", "id": "GO:0034045", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034045", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH23", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH23" } ], "pmid": "" }, { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH23", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH23" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "GTPase activity", "id": "GO:0003924", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003924", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH23", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH23" } ], "pmid": "" }, { "name": "GTP binding", "id": "GO:0005525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005525", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH23", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH23" } ], "pmid": "" }, { "name": "G protein activity", "id": "GO:0003925", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003925", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH23", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH23" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "19669", "name": "", "equation": "GTP + H2O = GDP + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "19669", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/19669" } ] }, { "id": "R-SSC-8847887", "name": "RAB33B:GTP binds RIC1:RGP1", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "Golgi membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-8847887", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8847887" } ] }, { "id": "R-SSC-8854612", "name": "TBC1D25 accelerates GTP hydrolysis by RAB33B", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "autophagosome membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-8854612", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8854612" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1VH38-1", "uniprot_ac": "A0A4X1VH38", "uniprot_id": "A0A4X1VH38_PIG", "mass": { "chemical_mass": 44982.0, "monoisotopic_mass": 44982.0 }, "refseq": { "ac": "XP_003130068", "name": "transforming growth factor beta regulator 1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130068" }, "gene_names": [ { "name": "TBRG1", "type": "recommended", "evidence": [ { "id": "A0A4X1VH38", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH38" } ] }, { "name": "TBRG1", "type": "synonym", "evidence": [ { "id": "XP_003130068", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130068" } ] } ], "protein_names": [ { "name": "Transforming growth factor beta regulator 1", "type": "synonym", "evidence": [ { "id": "A0A4X1VH38", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH38/entry#names_and_taxonomy" } ] }, { "name": "transforming growth factor beta regulator 1", "type": "synonym", "evidence": [ { "id": "XP_003130068", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130068" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH38", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH38" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TBRG1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH38", "locus": { "chromosome": "9", "start_pos": 51878432, "end_pos": 51865327, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000025661", "url": "https://www.ensembl.org/id/ENSSSCG00000025661" } ] } } ], "crossref": [ { "id": "A0A4X1VH38", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VH38", "database": "AlphaFoldDB", "categories": [] }, { "id": "100521637", "url": "https://www.ncbi.nlm.nih.gov/gene/100521637", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003888", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003888", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003889", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003889", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040092", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040092", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100521637", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521637", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YYNDYHK", "url": "https://omabrowser.org/oma/group/YYNDYHK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VH38", "url": "https://www.orthodb.org/?gene=A0A4X1VH38", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR22715", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22715", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22715:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22715:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05964", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05964", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF05965", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05965", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003130068", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130068", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VH38", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH38", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VH38-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH38-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VH66", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH66", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VH66-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH66-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSLLGGLASSPRAPLQSSRARMKKLPKKSQNEKYRLKYLRLRKAAKATVFENAAICDEIARLEEKFLKAKEERRYLLKKLLQLQALTEGEVQAAAPSHSSSLPLTYGVASSVGTVQGAGPISGPSTGAEEPFGKKSKKEKKEKGKENNKLEVLKKASKKKKMEGGARKLVQPIALDPSGRPVFPIGLGGLTVYSLGEIITDRPGFHDESAIYPVGYCSTRIYASMQHPDQECLYTCQIKDGGTGPQFEIVPEDDPQNAIVSSSADACHAELLKTISAAMGKLMPNMLPSGADFFGFSHPTIHNLIQSCPGARKCVSYQWVKFDVCKPGDGPPPQRQLEDDSATSFEAFQRQTFDEDHNDPILQGSLDLPELQPTAFVSSYQPMFLTHEPLIETHLQHLKSPSHCSPTQSSD", "length": 411, "header": "tr|A0A4X1VH38-1|A0A4X1VH38_PIG Isoform 1 of Transforming growth factor beta regulator 1 OS=Sus scrofa OX=9823 GN=TBRG1 PE=4 SV=1 CANONICAL=A0A4X1VH38-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VH38-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH38/entry", "sequence": { "sequence": "MSLLGGLASSPRAPLQSSRARMKKLPKKSQNEKYRLKYLRLRKAAKATVFENAAICDEIARLEEKFLKAKEERRYLLKKLLQLQALTEGEVQAAAPSHSSSLPLTYGVASSVGTVQGAGPISGPSTGAEEPFGKKSKKEKKEKGKENNKLEVLKKASKKKKMEGGARKLVQPIALDPSGRPVFPIGLGGLTVYSLGEIITDRPGFHDESAIYPVGYCSTRIYASMQHPDQECLYTCQIKDGGTGPQFEIVPEDDPQNAIVSSSADACHAELLKTISAAMGKLMPNMLPSGADFFGFSHPTIHNLIQSCPGARKCVSYQWVKFDVCKPGDGPPPQRQLEDDSATSFEAFQRQTFDEDHNDPILQGSLDLPELQPTAFVSSYQPMFLTHEPLIETHLQHLKSPSHCSPTQSSD", "length": 411, "header": "tr|A0A4X1VH38-1|A0A4X1VH38_PIG Isoform 1 of Transforming growth factor beta regulator 1 OS=Sus scrofa OX=9823 GN=TBRG1 PE=4 SV=1 CANONICAL=A0A4X1VH38-1" }, "locus": { "chromosome": "9", "start_pos": 51875496, "end_pos": 51865552, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028534.3", "url": "https://www.ensembl.org/id/ENSSSCT00000028534.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021321.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021321.2" } ] } }, { "isoform_ac": "A0A4X1VH66-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH66/entry", "sequence": { "sequence": "MVWPALWELYRELGRFLGQALELRNHLGRNPRRRKKKKAKRTTNWKIITDRPGFHDESAIYPVGYCSTRIYASMQHPDQECLYTCQIKDGGTGPQFEIVPEDDPQNAIVSSSADACHAELLKTISAAMGKLMPNMLPSGADFFGFSHPTIHNLIQSCPGARKCVSYQWVKFDVCKPGDGPPPQRQLEDDSATSFEAFQRQTFDEDHNDPILQGSLDLPELQPTAFVSSYQPMFLTHEPLIETHLQHLKSPSHCSPTQSSD", "length": 260, "header": "tr|A0A4X1VH66-1|A0A4X1VH38_PIG Computationally mapped isoform of Transforming growth factor beta regulator 1 OS=Sus scrofa OX=9823 GN=TBRG1 PE=4 SV=1 CANONICAL=A0A4X1VH38-1" }, "locus": { "chromosome": "9", "start_pos": 51875496, "end_pos": 51869158, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000036854.2", "url": "https://www.ensembl.org/id/ENSSSCT00000036854.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041978.1", "url": "https://www.ensembl.org/id/ENSSSCP00000041978.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH66", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH66" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100521637", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521637", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7GZH7-1", "protein_name": "Transforming growth factor beta regulator 1 isoform X1", "gene_name": "Tbrg1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSLLGGLASEPRTPLSHKARMKKLPKKSQNEKYRLKYLRLRKAAKATVFDDGSFKSTKIFVKPEDVLNIEMENAAICDEIARLEEKFLKAKEERRYLLKKLLQLQALTEGEPQAPAPSHSSSLPLAYGVAGPVGTIQGAGPSTGAEEPFGKKSKKEKKEKGKENNKLEVLKKTSKKKKMEGGARKLVRSIALDPSGRPVFPIGLGGLTVYSLGEIITNRPGFHDESAIYPVGYCSTRVFASMKCPDQKCLYTCQVKDGGVQPQFEIVPEDDPQNTIVSSSADACYEELVRTISNATGKLMPNLLSCGAEFFGFSHPVIHNLIQSCPEAQNCVNHQWVKSDACKPRKGQLSQELTENDAAMSLEAFETQTFDDDHEDSILPGSLDLPELQHEAFVSSYQPEFLTHEPLVDTDLQDLKSPSQCSPMQSSD", "length": 428 }, "evidence": [ { "id": "A0A4X1VH38", "url": "https://omabrowser.org/oma/group/A0A4X1VH38/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "F1N0F3-1", "protein_name": "Transforming growth factor beta regulator 1", "gene_name": "TBRG1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSLLGSLASSPRDPLQSSKARMKKLPKKSQNEKYRLKYLRLRRAAKATVFENAAICDEIARLEEKFLKAKEERRYLLKKLLQLQALTEGDVQAAAPSHSSSLPLTYTVASSVGTLQGTGPVSGPSTGAEEPFGKKSKKEKKEKGKENNKLEVLKKTSKKKKMEAGARKPVQPIALDPSGRPVFPIGLGGLTVYSLGEIITDRPGFHDETAIYPVGYCSTRVYASMRSPDQECLYTCQIKDGGTQPQFEIVPEDDPQNAIISSSADACHAELLKTISTAMGKLIPNLHPSGADFFGFSHPAIHNLIQSCPGARKCVNYQWVKFDVCKPGDSPPPQEQLENDIATSFEAFQRHTFDEDHSDPILQGSLDLPELQPTAFVSSYQPMFLTHEPLVDAHLQHLKSPSPCSPSQSSD", "length": 411 }, "evidence": [ { "id": "A0A4X1VH38", "url": "https://omabrowser.org/oma/group/A0A4X1VH38/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3UB74-1", "protein_name": "Transforming growth factor beta regulator 1", "gene_name": "Tbrg1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVLSGLASEPRTPLSSKARMKRLPRKSQNEKYRLKYLRLRRAAKATVFENASICDEIARLEEKFLKAKEERRYLLKKLLQIHALTEGEPQAAAPSHSSSLPLPYGVTSSVGTMQGAGPSTGAEEPFAKKSKKEKKEKGKENSKLEVLKKTSKKKKMEGGARKLVRPIALDPSGQPVFPIGLGGLTVYSLGEIITNRPGFHDENAIYPVGYCSTRVYASMKCPDQKCLYTCQIKDGGVQPQFEIVPEDDPQNTIVGSSADACYEELLRAISATTGKLMPNPLSCGADFFGFSHPTIHNLIQSCPEAQNCVNYQWVKFDACKPRKGQLSQELPENDATMSLEAFQTQTFDDDHDDSILPGSLDLPELQHEAFVSSYQPEFLTHEPLVDTDLQHLKSPSQCSPIQSSD", "length": 406 }, "evidence": [ { "id": "A0A4X1VH38", "url": "https://omabrowser.org/oma/group/A0A4X1VH38/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3YBR2-1", "protein_name": "Transforming growth factor beta regulator 1", "gene_name": "TBRG1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSLLDGLASSPRAPLQSSKARMKKLPKKSQNEKYRLKYLRLRKAAKATVFENAAICDEIARLEEKFLKAKEERRYLLKKLLQLQALTEGEVQAAAPSHSSSLPLTYGVASSVGTIQGAGPISGPSTGAEEPFGKKTKKEKKEKGKENNKLEVLKKTCKKKKMAGGARKLVQPIALDPSGRPVFPIGLGGLTVYSLGEIITDRPGFHDESAIYPVGYCSTRIYASMKCPDQKCLYTCQIKDGGVQPQFEIVPEDDPQNAIVSSSADACHAELLRTISTTMGKLMPNLLPAGADFFGFSHPAIHNLIQSCPGARKCINYQWVKFDVCKPGDGQLPEGLPENDAAMSFEAFQRQIFDEDQNDPLLPGSLDLPELQPAAFVSSYQPMYLTHEPLVDTHLQHLKSPSQGSPIQSSD", "length": 411 }, "evidence": [ { "id": "A0A4X1VH38", "url": "https://omabrowser.org/oma/group/A0A4X1VH38/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5PQK8-1", "protein_name": "Transforming growth factor beta regulator 1", "gene_name": "Tbrg1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSVLSGLASEPRTPLSSKARMKRLPKKNQNEKYRLKYLRLRRAAKATVFENAAVCDEIARLEEKFLKAKEERRYLLKKLLQIHALTEGEPQAAAPSHSSSLPLAYGVTSSVGTIQGAGPSTGAEEPFAKKSKKEKKEKGKENSKLEVLKKTSKRKKMEGGARKLVRPIALDPSGQPVFPIGLGGLTVYSLGEIITNRPGFHDENAIYPVGYCSTRVYASMKCPDQKCLYTCQIKDGGVQPQFEIVPEDDPRNTIVGSSADACYEELLRAISAATGKLMPNPLSCGADFFGFSHPTIHNLIQSCPEAQNCVNYQWVKFDACKPRKGQLSQELPENDAAMSLEAFPTQTFDDDHEDSILPGSLDLPELQHEAFVSSYQPEFLTHEPLVDTDLQHLKSPSQCSPIQSSD", "length": 406 }, "evidence": [ { "id": "A0A4X1VH38", "url": "https://omabrowser.org/oma/group/A0A4X1VH38/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "protein localization to nucleoplasm", "id": "GO:1990173", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990173", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH38", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH38" } ], "pmid": "" }, { "name": "negative regulation of cell population 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"https://www.ncbi.nlm.nih.gov/protein/XP_003130067" }, "gene_names": [ { "name": "PANX3", "type": "recommended", "evidence": [ { "id": "A0A4X1VH71", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH71" } ] }, { "name": "PANX3", "type": "synonym", "evidence": [ { "id": "XP_003130067", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130067" } ] } ], "protein_names": [ { "name": "Pannexin 3", "type": "synonym", "evidence": [ { "id": "A0A4X1VH71", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH71/entry#names_and_taxonomy" } ] }, { "name": "pannexin-3", "type": "synonym", "evidence": [ { "id": "XP_003130067", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130067" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH71", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH71" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PANX3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH71", "locus": { "chromosome": "9", "start_pos": 51861331, "end_pos": 51853949, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015194", "url": "https://www.ensembl.org/id/ENSSSCG00000015194" } ] } } ], "crossref": [ { "id": "A0A4X1VH71", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VH71", "database": "AlphaFoldDB", "categories": [] }, { "id": "100521468", "url": "https://www.ncbi.nlm.nih.gov/gene/100521468", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000990", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000990", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039099", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039099", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100521468", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521468", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "GQDKMKS", "url": "https://omabrowser.org/oma/group/GQDKMKS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VH71", "url": "https://www.orthodb.org/?gene=A0A4X1VH71", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15759", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15759", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15759:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15759:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "XP_003130067", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130067", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VH71", "url": 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"MSLAHTAAEYMLSDALLPDRRGPRLKGLRLELPLDRMVKFVAVGFPLLLMSLAFAQEFSSGSPISCFSPGNFSIRQAAYVDSSCWDSLVHHEQDESGQFKTKSLWPHKALPYSLLALAVGMYLPVLLWQYAAVPALSSDLLFIISELDKSYNRAIRLVQHMLKIQQKSSDPHVFWDELEKARKERYFEFPLLERYLACKQRSHSLVATYLLRNSLLLLFTSAIYLYLGHFHLDVFFQEEFSCSIKTGLLRDETYIPDLITCRLTSLSVFQIVSLACVAIYTLLVPVIMYNLTRLCRWDKRLLSIYEMLPAFDLLSRKMLGCPINDLNVILLFLRANISELISFSWLSVLCALKDTTTQKHNIDTVVDFMTVLAGLEPSKPKHLTHGMCDENP", "length": 392, "header": "tr|A0A4X1VH71-1|A0A4X1VH71_PIG Isoform 1 of Pannexin 3 OS=Sus scrofa OX=9823 GN=PANX3 PE=4 SV=1 CANONICAL=A0A4X1VH71-1" }, "locus": { "chromosome": "9", "start_pos": 51860327, "end_pos": 51854148, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016560.3", "url": "https://www.ensembl.org/id/ENSSSCT00000016560.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016116.1", "url": "https://www.ensembl.org/id/ENSSSCP00000016116.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 71, "start_aa": "Asn", "end_pos": 71, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn71", "evidence": [ { "id": "A0A4X1VH71", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH71#ptm_processing" }, { "id": "PIRSR600990-52", "database": "PIR Site Rule", "url": "https://proteininformationresource.org/cgi-bin/pirrule?id=PIRSR600990-52" } ], "filter_code": "001000000000000000000.00010000000000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH71", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH71" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100521468", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521468", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1A6C8-1", "protein_name": "Pannexin", "gene_name": "PANX3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSLSHTAAEYMLSDALLPDPSSSRAKGLRLELPSDRVLKFVAVGLPIFLVSLAFAREFSAGSQISCFSPSNFTGKQSAYADTACWDSLLHHGFDAEGRAVTKSLWALKVFPYSLLVVAVLMYLPYLLWRYAASPALHSDLLFIIDELDKSYNRSVRLVQHMRKVQQASDDPEQFWEEYERARQERYFEFPLLERYLACKQHSHSLVIIYLLRNLLLLLFLAATCLYLVFLHLNIFFQDEFSCSIKTGLLQAEPHVPPLIPCKLVFFSVFQLISLTVGGVYVLLMPVVIYSALQLCQWDKGLLSVYEMLPAFDLLSRKMLTCPINDLNVILLFLRANISELSSFSRLNAVSALRGATAEKQDIDTVVDFMTLLAGLEATKPKYQACMPPGNGEAIGTGSGSQGHDATTSPCVGRSCYRNSFAEKTAELEA", "length": 429 }, "evidence": [ { "id": "A0A4X1VH71", "url": "https://omabrowser.org/oma/group/A0A4X1VH71/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E1BF03-1", "protein_name": "Pannexin", "gene_name": "PANX3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSLAHTAAEYMLSDALLPDRKGPRLKGLRLELPLDRMVKFVAVGFPLLLVSLAFAQEFSSGSPISCFCPSNFSIRQAAYVDSSCWDSLVHHEQDESGQSKTKSLWPHKALPYSLLALAVAMYLPVLLWQYAAVPALSSDLLFIISELDKSYNRAIRLVQHMLKIRQESSDTDVFWDELEKARKERYFEFPLLERYLACKQRSHSLVATYLLRNALLLLFTSATYLYLGHFHLDVFFQEEFSCSIKTGLLHDETHIPDLITCRLTSLSVFQIVSLASVAIYTLLVPVILYNLTRLCRWDKRLLSIYEMLPAFDLLSRKMLGCPINDLNVILLFLRANISELVSFSWLSVLCALKDTATQKHNIDTVVDFMTLLAGLEPSKPKHLTHGMCDENP", "length": 392 }, "evidence": [ { "id": "A0A4X1VH71", "url": "https://omabrowser.org/oma/group/A0A4X1VH71/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3IIB4-1", "protein_name": "Pannexin", "gene_name": "Panx3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSLAHTAAEYMLSDALLPDRRGSRLKGLRLELPLDKIIKFVTVGFPLLLMSLAFAQEFSSGSPISCFSPSNFSVRQAAYVDSCCWDSLAHYKLDEAGQYKVKSLWPHKALPYSLLALAVAMYLPVLLWQYAAVPALSSDLLFIISELDKSYNRSIRLVQHMLKIRQKSSDPHVFWDELEKARKERYFEFPLLERYLACKQRSHSLVATYLLRNSLLLLFTSATYLYLGHFHLDVLFQEEFSCSIKTGLLHAETHVPDLITCRLTSLSVFQIVSLSSAVIYTILVPVIIYNLTQLCRWDKRLLSIYEMLPAFDLLSRKMLGCPINDLNVILLFLRANISELISFSWLSVLCVLKDTTTQKHNIDTVVDFMTLLAGLEPSKPKHLTQQVYDEHP", "length": 392 }, "evidence": [ { "id": "A0A4X1VH71", "url": "https://omabrowser.org/oma/group/A0A4X1VH71/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P60572-1", "protein_name": "Pannexin-3", "gene_name": "Panx3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"https://www.ebi.ac.uk/QuickGO/term/GO:0055077", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH71", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH71" } ], "pmid": "" }, { "name": "wide pore channel activity", "id": "GO:0022829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022829", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH71", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH71" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH71", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH71" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH71", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH71" } ], "pmid": "" }, { "name": "gap junction", "id": "GO:0005921", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005921", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH71", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH71" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "cell-cell signaling", "id": "GO:0007267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007267", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH71", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH71" } ], "pmid": "" }, { "name": "monoatomic cation transport", "id": "GO:0006812", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006812", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH71", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VH71" } ], "pmid": "" }, { "name": "osteoblast differentiation", "id": "GO:0001649", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001649", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VH71", "url": 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scrofa OX=9823 GN=STIMATE PE=4 SV=1 CANONICAL=A0A4X1VHF7-1" }, "locus": { "chromosome": "13", "start_pos": 35017678, "end_pos": 34953611, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041050.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041050.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058318.1", "url": "https://www.ensembl.org/id/ENSSSCP00000058318.1" } ] } }, { "isoform_ac": "A0A5G2QUD9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUD9/entry", "sequence": { "sequence": "MLFIHFANVYLADLTEEDPCSLYLINFLLDATVGMLLIYVGVRAVSVLVEWQQWESLRFGEYGDPLQCGAWVGQCALYIVIMIFEKSVVFIVLLILQWKKVALLNPIENPDLKLAIVMLIVPFFVNALMFWVVDNFLMRKGRTKAKLEERGANQDSRNGSKVRYRRAASHEESESEILISADDEMEESDVEEDLRRLTPLKPAKKKKHRFGLPV", "length": 214, "header": "tr|A0A5G2QUD9-1|A0A4X1VHF7_PIG Computationally mapped isoform of STIM activating enhancer OS=Sus scrofa OX=9823 GN=STIMATE PE=4 SV=1 CANONICAL=A0A4X1VHF7-1" }, "locus": { "chromosome": "13", "start_pos": 34964873, 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A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QUD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUD9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "F1NIC7-1", "protein_name": "STIM activating enhancer", "gene_name": "LOC121106612", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGVTPPNCSLGAALSPQPGAGPAAGPGERGCENGALMDSFGIFLQGLLGVLAFSILMLKRLREPKHERRPWRIWFLDTSKQAIGMLFIHFANVYLSDLTEEDPCSLYFINFLLDATLGMLLIYAGIRAVSSIVEWQQWESLRFGEYGDPLQCSAWMGQCALYIMIMTFEKTIIIIVLLIPQWKEVALLNPIENPQLELAIVMLIVPFFVNAFIFWVVDNFLMKKGKTKAKLEEKEAGQDSRNGSKVRYRRAASHEESESEILISADDEMEESDVEEDLRRLTNLKPIKKKKHRFGLPV", "length": 298 }, "evidence": [ { "id": "A0A4X1VHF7", "url": "https://omabrowser.org/oma/group/A0A4X1VHF7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { 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"tr|A0A4X1VHK3-1|A0A4X1VHK3_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN=OR8D4 PE=3 SV=1 CANONICAL=A0A4X1VHK3-1" }, "locus": { "chromosome": "9", "start_pos": 50714062, "end_pos": 50713127, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016516.4", "url": "https://www.ensembl.org/id/ENSSSCT00000016516.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016073.2", "url": "https://www.ensembl.org/id/ENSSSCP00000016073.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VHK3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VHK3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100524947", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524947", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "F1LWN7-1", "protein_name": "Olfactory receptor", "gene_name": "Or8d4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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} } ], "crossref": [ { "id": "A0A4X1VN24", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VN24", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd03381", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03381", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100518871", "url": "https://www.ncbi.nlm.nih.gov/gene/100518871", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000326", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000326", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016275", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016275", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036938", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036938", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100518871", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518871", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "EEHLFYV", "url": "https://omabrowser.org/oma/group/EEHLFYV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VKA7", "url": "https://www.orthodb.org/?gene=A0A4X1VKA7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12591", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12591", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12591:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12591:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01569", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01569", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-70263", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-70263", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "16689", "url": "https://www.rhea-db.org/rhea/16689", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1VKA7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VKA7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VKA7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VKA7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VN24", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VN24", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VN24-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VN24-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDFLHRNGVLLIQHLQKDYRAYYSFLNFMSNVGDPRNIFSIYFPLWFQLNQRVGTKMIWVAVIGDWFNLIFKWILFGHRPYWWVQETQIYPNHSSPCLEQFPTTCETGPGSPSGHAMGSSCVWYVMVTAALGHTIRWMDKSSTTLHRLTWSFLWSLFWLIQISVCISRVFIATHFPHQVILGVIGGMLVAEVFEHTPGIQTASLSTYLKTNLFLFLFALGLYLLLGLLDIDLLWSVPIAKKWCANPEWIHIDTTPFAGLVRNLGVLFGLGFAINSEMFLRSCRGENGYRLSFRLLCTMASLTTLQLYHFIKIPTQAEYLFYVLSFCKSASIPLTVVALIPYCIHALMKPSKKKIH", "length": 355, "header": "tr|A0A4X1VN24-1|A0A4X1VN24_PIG Isoform 1 of Glucose-6-phosphatase OS=Sus scrofa OX=9823 GN=G6PC2 PE=3 SV=1 CANONICAL=A0A4X1VN24-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VKA7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VKA7/entry", "sequence": { "sequence": "MDFLHRNGVLLIQHLQKDYRAYYSFLNFMSNVGDPRNIFSIYFPLWFQLNQRVGTKMIWVAVIGDWFNLIFKWILFGHRPYWWVQETQIYPNHSSPCLEQFPTTCETGPGSPSGHAMGSSCVWYVMVTAALGHTIRWMDKSSTTLHRHACGRGL", "length": 154, "header": "tr|A0A4X1VKA7-1|A0A4X1VN24_PIG Computationally mapped isoform of Glucose-6-phosphatase OS=Sus scrofa OX=9823 GN=G6PC2 PE=3 SV=1 CANONICAL=A0A4X1VN24-1" }, "locus": { "chromosome": "15", "start_pos": 75388659, "end_pos": 75382456, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017341.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017341.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016877.4", "url": "https://www.ensembl.org/id/ENSSSCP00000016877.4" } ] } }, { "isoform_ac": "A0A4X1VN24-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VN24/entry", "sequence": { "sequence": "MDFLHRNGVLLIQHLQKDYRAYYSFLNFMSNVGDPRNIFSIYFPLWFQLNQRVGTKMIWVAVIGDWFNLIFKWILFGHRPYWWVQETQIYPNHSSPCLEQFPTTCETGPGSPSGHAMGSSCVWYVMVTAALGHTIRWMDKSSTTLHRLTWSFLWSLFWLIQISVCISRVFIATHFPHQVILGVIGGMLVAEVFEHTPGIQTASLSTYLKTNLFLFLFALGLYLLLGLLDIDLLWSVPIAKKWCANPEWIHIDTTPFAGLVRNLGVLFGLGFAINSEMFLRSCRGENGYRLSFRLLCTMASLTTLQLYHFIKIPTQAEYLFYVLSFCKSASIPLTVVALIPYCIHALMKPSKKKIH", "length": 355, "header": "tr|A0A4X1VN24-1|A0A4X1VN24_PIG Isoform 1 of Glucose-6-phosphatase OS=Sus scrofa OX=9823 GN=G6PC2 PE=3 SV=1 CANONICAL=A0A4X1VN24-1" }, "locus": { "chromosome": "15", "start_pos": 75389146, "end_pos": 75382456, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067873.2", "url": "https://www.ensembl.org/id/ENSSSCT00000067873.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067239.2", "url": "https://www.ensembl.org/id/ENSSSCP00000067239.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VKA7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VKA7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100518871", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518871", "resource": "KEGG Pathway" }, { "id": "R-SSC-70263", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-70263", "resource": "Reactome", "description": "Gluconeogenesis" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3L7HHB3-1", "protein_name": "Glucose-6-phosphatase", "gene_name": "G6pc2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDFLHRSRVLIIQHLQKDYRAYYNFLNFMSNVGDLRNIFSIYFPLWFQLNQTVGTKMIWVAVIGDWFNLIFKWILFGHRPYWWIQETQIYPNHSSPCLEQFPTTCETGPGSPSGHAMGSSCVWYVMVTAALSYTVSRLDKSSVTLHRLTWSCLWSVFWLIQVSVCISRVFIATHFPHQVILGIIGGMLVAEAFEHTPGIHMANLNVYLKTNIFLFLFALGFYLLLRLLDIDLLWSVPIAKKWCANPDWIHIDSTPFAGLVRNLGVLFGLGFAINSEMFLKSCQGENGDKLSFQLLCAITSLATLQLYHFIKIPTHREPLFYLLSFCKSASIPLTVVALIPYCVHMFMRASEKKTK", "length": 355 }, "evidence": [ { "id": "A0A4X1VN24", "url": "https://omabrowser.org/oma/group/A0A4X1VN24/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "F1MSR0-1", "protein_name": "Glucose-6-phosphatase", "gene_name": "G6PC2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MDFLHRNGVLVIQHLQKDYRAYYNFLNFMSNVGDPRNIFSIYFPLWFQLNQTVGTKMIWVAVIGDWFNLIFKWILFGHRPYWWVQETQIYPNHSSPCLEQFPTTCETGPGSPSGHAMGSSCVWYVMVTAALSHTVSQMDKSFITLHRLTWSFLWSLFWLIQINVCISRVFIATHFPHQVILGVIGGVLVAEIFEYTPGIQTASLSVYLKTNLFLFLFALGFYLLLRHLDIDLLWSVPIAKKWCANPDWIHIDTTPFAGLVRNLGVLFGLGFAINSEMFLRSCRGENGYGLSFRLLCALVSLTTLQLYHFIKIPTDTEYLFYVLSFCKSASIPLTVVALIPYCIHMLMKPSAKKLN", "length": 355 }, "evidence": [ { "id": "A0A4X1VN24", "url": "https://omabrowser.org/oma/group/A0A4X1VN24/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F1NTA5-1", "protein_name": "Glucose-6-phosphatase", "gene_name": "G6PC2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MDLLHSNGVLIIQHLQRDYRAYQDFLNFMSHVGDPRNIFSFYFPLWFQLNQVVGTKMIWVAVIGDWFNLIFKWILFGHRPYWWVHETMIYPNQSSPCLEQFPITCETGPGSPSGHAMGSSCVWYVMVTAALSYTVRWKEKSAVTLHRLTWSLLWTIFWIIQISVCISRVFIATHFPHQVILGVFAGIVVAEAFEHTPAIQTASLRMYIKTNLFLFIFALGFYLVLKLLDIDLLWSVPKAKKWCANPDWINIDTTPFAGLVRNLGAFFGLGIGINSEMFITSCKGKNSCKLSFRVLCIAASLATLQLYNFVKIPTHTEYLFYILSFCKSAAMPLTVVALVPYCVHTLMRTTDKKCN", "length": 355 }, "evidence": [ { "id": "A0A4X1VN24", "url": "https://omabrowser.org/oma/group/A0A4X1VN24/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q9NQR9-1", "protein_name": "Glucose-6-phosphatase 2", "gene_name": "G6PC2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDFLHRNGVLIIQHLQKDYRAYYTFLNFMSNVGDPRNIFFIYFPLCFQFNQTVGTKMIWVAVIGDWLNLIFKWILFGHRPYWWVQETQIYPNHSSPCLEQFPTTCETGPGSPSGHAMGASCVWYVMVTAALSHTVCGMDKFSITLHRLTWSFLWSVFWLIQISVCISRVFIATHFPHQVILGVIGGMLVAEAFEHTPGIQTASLGTYLKTNLFLFLFAVGFYLLLRVLNIDLLWSVPIAKKWCANPDWIHIDTTPFAGLVRNLGVLFGLGFAINSEMFLLSCRGGNNYTLSFRLLCALTSLTILQLYHFLQIPTHEEHLFYVLSFCKSASIPLTVVAFIPYSVHMLMKQSGKKSQ", "length": 355 }, "evidence": [ { "id": "A0A4X1VN24", "url": "https://omabrowser.org/oma/group/A0A4X1VN24/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9Z186-1", "protein_name": "Glucose-6-phosphatase 2", "gene_name": "G6pc2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDFLHRSGVLIIHHLQEDYRTYYGFLNFMSNVGDPRNIFSIYFPLWFQLNQNVGTKMIWVAVIGDWFNLIFKWILFGHRPYWWIQETEIYPNHSSPCLEQFPTTCETGPGSPSGHAMGSSCVWYVMVTAALSYTISRMEESSVTLHRLTWSFLWSVFWLIQISVCISRVFIATHFPHQVILGVIGGMLVAEAFEHTPGVHMASLSVYLKTNVFLFLFALGFYLLLRLFGIDLLWSVPIAKKWCANPDWIHIDSTPFAGLVRNLGVLFGLGFAINSEMFLRSCQGENGTKPSFRLLCALTSLTTMQLYRFIKIPTHAEPLFYLLSFCKSASIPLMVVALIPYCVHMLMRPGDKKTK", "length": 355 }, "evidence": [ { "id": "A0A4X1VN24", "url": "https://omabrowser.org/oma/group/A0A4X1VN24/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VN24", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VN24" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VN24", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VN24" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "gluconeogenesis", "id": "GO:0006094", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006094", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VN24", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VN24" } ], "pmid": "" }, { "name": "glucose homeostasis", "id": "GO:0042593", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042593", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VN24", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VN24" } ], "pmid": "" }, { "name": "regulation of insulin secretion", "id": "GO:0050796", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050796", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VN24", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VN24" } ], "pmid": "" }, { "name": "glucose 6-phosphate metabolic process", "id": "GO:0051156", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051156", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VN24", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VN24" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "glucose-6-phosphatase activity", "id": "GO:0004346", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004346", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VN24", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VN24" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 92, "end_pos": 94, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "16689", "name": "", "equation": "D-glucose 6-phosphate + H2O = D-glucose + phosphate", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "16689", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/16689" } ] }, { "id": "R-SSC-3266566", "name": "G6PC2 hydrolyzes G6P to form Glc and Pi (islet)", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "endoplasmic reticulum lumen, endoplasmic reticulum membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-3266566", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3266566" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1VN24", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VN24" }, { "id": "SM00014", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00014" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Phosphatidic acid phosphatase type 2/haloperoxidase", "eco_id": "ECO_0000259", "start_pos": 53, "end_pos": 194, "start_aa": "Val", "end_aa": "Glu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 92, "end_pos": 94 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", 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"glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VKE3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VKE3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100126279", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100126279", "resource": "KEGG Pathway" }, { "id": "R-SSC-1660661", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1660661", "resource": "Reactome", "description": "Sphingolipid de novo biosynthesis" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VKE3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VKE3" } ], "pmid": "" }, { "name": "sphingosine N-acyltransferase activity", "id": "GO:0050291", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050291", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VKE3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VKE3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VKE3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VKE3" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VKE3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VKE3" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VKE3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VKE3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "ceramide biosynthetic process", "id": "GO:0046513", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046513", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VKE3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VKE3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 18, "end_pos": 20, "annotation": "n_glycosylation_sequon" }, { "start_pos": 285, "end_pos": 287, "annotation": "n_glycosylation_sequon" }, { "start_pos": 374, "end_pos": 376, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "23768", "name": "", "equation": "sphing-4-enine + a fatty acyl-CoA = an N-acylsphing-4-enine + CoA + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "23768", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/23768" } ] }, { "id": "33351", "name": "", "equation": "hexacosanoyl-CoA + sphinganine = N-hexacosanoylsphinganine + CoA + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "33351", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/33351" } ] }, { "id": "33591", "name": "", "equation": "tetracosanoyl-CoA + sphinganine = N-tetracosanoylsphinganine + CoA + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "33591", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/33591" } ] }, { "id": "36535", "name": "", "equation": "docosanoyl-CoA + sphinganine = N-docosanoylsphinganine + CoA + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "36535", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/36535" } ] }, { "id": "36547", "name": "", "equation": "sphinganine + octadecanoyl-CoA = N-(octadecanoyl)-sphinganine + CoA + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "36547", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/36547" } ] }, { "id": "36555", "name": "", "equation": "eicosanoyl-CoA + sphinganine = N-eicosanoylsphinganine + CoA + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "36555", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/36555" } ] }, { "id": "36691", "name": "", "equation": "sphing-4-enine + octadecanoyl-CoA = N-octadecanoylsphing-4-enine + CoA + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "36691", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/36691" } ] }, { "id": "R-SSC-428185", "name": "Ceramide synthases transfer acyl-CoA onto sphingoid", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, endoplasmic reticulum membrane", "input_participant_list": [ "R-ALL-5279323" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-428185", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-428185" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-5279323", "participant_name": "sphingoid base [cytoplasm]", "crossref": [ { "id": "35785", "database": "ChEBI", "url": "" }, { "id": "Sphingoids", "database": "AraCyc", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1VKE3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VKE3" }, { "id": "PS50071", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50071" }, { "id": "PRU00108", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00108" 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[], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VKJ7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VKJ7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100519223", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519223", "resource": "KEGG Pathway" }, { "id": "R-SSC-2453902", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2453902", "resource": "Reactome", "description": "The canonical retinoid cycle in rods (twilight vision)" }, { "id": "R-SSC-5365859", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5365859", "resource": "Reactome", "description": "RA biosynthesis pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "E1C781-1", "protein_name": "Dehydrogenase/reductase 9", "gene_name": "LOC121106449", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MFFYILLFLSISSLWWYWKTRDGGKVANLNGKYIFITGCDTGFGNMAAKTFDKKGFRVLASCLTETGAKELQAATSDQLQTVLLDVRDSNSVKKAAAWIKAKVQSEGLWGLVNNAGIMGPTAPTDWLDIEHFREPIEVNLIGLINVTINMLPLIKLAKGRIVNVSSIGGRLAFCGGGYCPSKFGVEGFNDSLRRDMKAFGVKVSCIQPGLFKTPLTDLAKILKEKEVIWNRLPPDTKKQYGEEYFQKEAAKKEKFSKACLNTDISLVVECMEHALTSLHPRAHYVVGQDAKWFWTPLSRMPADVQDFLLLGNREKPAVSHRK", "length": 322 }, "evidence": [ { "id": "A0A4X1VKJ7", "url": "https://omabrowser.org/oma/group/A0A4X1VKJ7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3GU84-1", "protein_name": "Dehydrogenase/reductase SDR family member 9", "gene_name": "Dhrs9", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLLLLFWVSALLVLCAFLWNYKGQLKIADITDKYVFITGCDTGFGNLAARTFDKKGFRVIAACLTESGSTALKATASERLHTVLLDVTNPENVKKTAQWVKSHVGEKGLWGLINNAGVLGVLAPTDWLTVNDYREPIEVNLFGLIDVTLNMLPLVKKARGRVINVSSIGGRLAFGGGGYTPSKYAVEGFNDSLRRDMKAFGVHVSCIEPGLFKTQLADPIKTTEKKLAVWKHLSPDIKQQYGEGYIEKSLHKLKSNTSFVNLDLSLVVECMDHALTSVFPKTRYTAGKDAKTFWIPLSHMPAFLQDFLLLKQKVELANPKAV", "length": 322 }, "evidence": [ { "id": "A0A4X1VKJ7", "url": "https://omabrowser.org/oma/group/A0A4X1VKJ7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q58NB6-1", "protein_name": "Dehydrogenase/reductase SDR family member 9", 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segregation during mitosis and error-free mitotic progression.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VLW1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VLW1#function" }, { "database": "UniProtKB", "id": "ARBA00093307", "url": "https://www.uniprot.org/uniprotkb/ARBA00093307#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VLW1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VLW1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CCDC86", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VLW1", "locus": { "chromosome": "2", "start_pos": 10895652, "end_pos": 10906119, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000013105", "url": "https://www.ensembl.org/id/ENSSSCG00000013105" } ] } } ], "crossref": [ { "id": "100526154", "url": "https://www.ncbi.nlm.nih.gov/gene/100526154", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR005579", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005579", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR026570", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026570", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100526154", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100526154", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PKCSQDQ", "url": "https://omabrowser.org/oma/group/PKCSQDQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VLW1", "url": "https://www.orthodb.org/?gene=A0A4X1VLW1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13557", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13557", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13557:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13557:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03879", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03879", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003122716", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003122716", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VLW1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VLW1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VLW1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VLW1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDTPLRRSRRLEGLKPESPENPTPVLQARRALVELESHPEEAREPGSPRNVQPPGLGSPRRQSETAPVSPSLQEGAGLGSSQRQPEPGPGSPQRQRDPGLESSQRQPESSPETPGLQSKPNGESPKFSQDQEADSELAGSKAEQTPESPQHQLQLGPGSLEPYPGQQAPDLEPSQPLQELPLQELPLQSPGSPQDQNEPSKPAPSRERGRDVLGPKKRESSSVQAPASKKQKKEEVPVIPKGKPKSGRVWKDRSKKRFSQMVQDKPLRTSWQRKMKERQERKLTKDFARHLEEEKERRRQEKKQRRAENLKRRLENERKAEVVQVIRNPAKLKRAKKKQLRSIEKRDTLAQLQKQPPQRPAAKI", "length": 364, "header": "tr|A0A4X1VLW1-1|A0A4X1VLW1_PIG Isoform 1 of Coiled-coil domain-containing protein 86 OS=Sus scrofa OX=9823 GN=CCDC86 PE=3 SV=1 CANONICAL=A0A4X1VLW1-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VLW1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VLW1/entry", "sequence": { "sequence": "MDTPLRRSRRLEGLKPESPENPTPVLQARRALVELESHPEEAREPGSPRNVQPPGLGSPRRQSETAPVSPSLQEGAGLGSSQRQPEPGPGSPQRQRDPGLESSQRQPESSPETPGLQSKPNGESPKFSQDQEADSELAGSKAEQTPESPQHQLQLGPGSLEPYPGQQAPDLEPSQPLQELPLQELPLQSPGSPQDQNEPSKPAPSRERGRDVLGPKKRESSSVQAPASKKQKKEEVPVIPKGKPKSGRVWKDRSKKRFSQMVQDKPLRTSWQRKMKERQERKLTKDFARHLEEEKERRRQEKKQRRAENLKRRLENERKAEVVQVIRNPAKLKRAKKKQLRSIEKRDTLAQLQKQPPQRPAAKI", "length": 364, "header": "tr|A0A4X1VLW1-1|A0A4X1VLW1_PIG Isoform 1 of Coiled-coil domain-containing protein 86 OS=Sus scrofa OX=9823 GN=CCDC86 PE=3 SV=1 CANONICAL=A0A4X1VLW1-1" }, "locus": { "chromosome": "2", "start_pos": 10906054, "end_pos": 10897769, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071179.2", "url": "https://www.ensembl.org/id/ENSSSCT00000071179.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069643.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069643.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 23, "start_aa": "Thr", "end_pos": 23, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr23", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VLW1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VLW1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100526154", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100526154", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "F1MM20-1", "protein_name": "Coiled-coil domain-containing protein 86", "gene_name": "CCDC86", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MDTPLRRSRRLEGLKPESPENPTSVLRVRRALVEFESNPKETGEPRSPPGLGSPSRQPETSPGSPSLPNGPALGSPRKQPELDSGSPEGHRDPGLNFPQNQPESSPESHLLQPKPSEESPKFSQNQGEADSELPKSKEEPTPGCPRHQLQQDSGSLEPFPGQKALGPEPSKPLQELTPRSPGSPRDQHEPSKPPAAGEPAREGPAPKKREGSSAQAPASKKPKEEIPVIPKGKPKSGRVWKDRSKKRFSQMVQDKPLRTSWQRKMKDRQERKLAKDFARHLEEEKERRRQEKKKRRAENLRRRLENERKAEIVQVIRNPAKLKRAKKKQLRSIEKRDTLAQLQKQPPQRPATKV", "length": 354 }, "evidence": [ { "id": "A0A4X1VLW1", "url": "https://omabrowser.org/oma/group/A0A4X1VLW1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3IE01-1", "protein_name": "Coiled-coil domain-containing protein 86", "gene_name": "Ccdc86", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDTPLRRSRRLEGLKPLSLETLPDPAVSRARRALLEFESNPEETSEPKSPRVQPLETSPGSPCLKQEAGFGSPQRQPEPDPGSLQSQQDLGLGSPTEQTESSPEAPQRETSSKSLPTQGELDSEVVHAKELIPGSPEPCPGQQAPGPEPSQPVQELTSQTPSFPQRQQEPNKLPPAGKTVTGGLDVKKRVIPSPQAPAPKKLKEEELPVIPKGKPKSGRVWKDRSKKRFSQMVQDKPLRTSWQQKMKERQERKLTKDFARHLEEEKQRRRQEKKERRAENLKRRLENERKAEIVQVIRNPAKLKKAKKKQLRSIQKRDTLALLQKQPPQRPVAKV", "length": 335 }, "evidence": [ { "id": "A0A4X1VLW1", "url": "https://omabrowser.org/oma/group/A0A4X1VLW1/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q5XIB5-1", "protein_name": "Coiled-coil domain-containing protein 86", "gene_name": "Ccdc86", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGTPLRRSRRLEGLNPLSLENLPDPEVSRAKRALVDFKSNPEETRELESPRVPPLDLVSPQPQPETSPESPCPKQDAGFGSPQRQPEPHPGSLQLHQDLGLDSPAGQTESNPESPQREQSSKLSPTQDSEVAHAKEEVIPRSPEPCPGQQAPGPEPSQPAQELAFQAPSSPERQLEPSKLPPAGESVTGSLDLKKRVIASPQAPASKKLKEELPVIPKGKPKSGRVWKDRSKKRFSQMVQDKPLRTSWQRKMKERQERKLAKDFARHLEEEKQRRRQEKKERRAENLRRRLENERKAEIVQVIRNPAKLKKAKKKQLRSIQKRDTLALLQKQPPQRPVAKV", "length": 341 }, "evidence": [ { "id": "A0A4X1VLW1", "url": "https://omabrowser.org/oma/group/A0A4X1VLW1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9H6F5-1", "protein_name": "Coiled-coil domain-containing protein 86", "gene_name": "CCDC86", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDTPLRRSRRLGGLRPESPESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKPKSGRVWKDRSKKRFSQMLQDKPLRTSWQRKMKERQERKLAKDFARHLEEEKERRRQEKKQRRAENLKRRLENERKAEVVQVIRNPAKLKRAKKKQLRSIEKRDTLALLQKQPPQQPAAKI", "length": 360 }, "evidence": [ { "id": "A0A4X1VLW1", "url": "https://omabrowser.org/oma/group/A0A4X1VLW1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9JJ89-1", "protein_name": "Coiled-coil domain-containing protein 86", "gene_name": "Ccdc86", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTPLRRSRRLEGLKPLSPENLPVPEVSRAKRALVDFKSNSEETGELKSTRVPPLSLPSPGPQPETSPGSPCPPLSLPSPGPQPETSPGSPCPPLSLPSPGPQPETSPGSPCPPLSLPSPGPQPETSPGSPCPPLSLPSPGPQPEASPGSPGPRQDADDGSPQRQPEPHPGSLQPHQDLGLESPAGQTESSPESPQREQPSKLPPPQGELDSEAAHAKEEVIPGSPEPCPGQQAPGPEPSQPAQELTVQAPSSPERQLEPGKLPPAGETVTESLNLKKRVIASPQAPASKKLKEKEELPVIPKGKPKSGRVWKDRSKKRFSQMVQDKPLRTSWQRKMKERQERKLAKDFARHLEEEKQRRRQEKKERRAENLRRRLENERKAEIVQVIRNPAKLKKAKKKQLRSIEKRDTLALLQKQPPQRPVAKV", "length": 426 }, "evidence": [ { "id": "A0A4X1VLW1", "url": "https://omabrowser.org/oma/group/A0A4X1VLW1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VLW1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VLW1" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12247:SF77", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00536", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00536", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02820", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02820", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12140", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12140", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020924611", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020924611", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VLZ5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VLZ5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VLZ5-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VLZ5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FMZ2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FMZ2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FMZ2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FMZ2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNGEQQIDADAGSSVEEVELSWEDYLEETGSTAVPYGSFKHVDTRLQNGFAPGMKLEVVVKTNPEAYWVATIITTCEQLLLLRYDGYGEDRRADFWCDIRKADLYPIGWCEQNKKTLEAPEGIRDKVSDWNEFLRQTLMGACSPPVPLLEGLRNGRNPLDLIAPGSRLECQAFQDSLSTWIVTVVDNIGGRLKLRYEGLESSDNFELWLYYLDPFLHHVGWAAQQGYELQPPLAIKHLKNEDEWQEILTKVKEEEEEPLPSYLFKDKPVIGMHSFSVNMKLEAVDPWSPFGICPATVVKVFDEKYFLVEMDDLRPENHAQRSFVCHANSPGIFPVQWSLKNGLHISPPPGYPGQDFDWADYLKQCGAEAAPQRCFPPSISEHEFKENMKLEAVNPLLPEEVCVATITAVRGSYLWLQLEGSKKPIPEFIVNVESMDIFPLGWCETNGHPLSAPRRARVHKQRKIAVVQPEKQIPSSRAVHEGLKNQELNSTDSVMVNGKYCCPKIYFNHRCFSGPYLNKGRIAELPQCVGPGNCVLVLREVLTLLINAAYKPSRVLRELQLDKDSVWHGCGEVLKAKYKGKSYRATVEIVKTADRVTEFCRQTCIKLECCPNLFGPRMVLDKCSENCSVLTKTKYTHYYGKKKNKRIGRPPGGHSNLACALKKASKRRKRRKNVFVHKKKRSSTSVDNTPAGSPQGSGGEDEDDPDEGDDDSLSEGSTSEQQDELQEESEMSEKKSCSSSPTQSEISTSIPPDRQRRKRELRTFSFSDDENKPPSPKEIRIEVAERLHLDTNPLKWSVADVVRFIRSTDCAPLARIFLDQEIDGQALLLLTLPTVQECMDLKLGPAIKLCHHIERIKFAFYEQFAN", "length": 866, "header": "tr|A0A4X1VLZ5-1|A0A4X1VLZ5_PIG Isoform 1 of Scm like with four mbt domains 1 OS=Sus scrofa OX=9823 GN=SFMBT1 PE=4 SV=1 CANONICAL=A0A4X1VLZ5-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VLZ5-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VLZ5/entry", "sequence": { "sequence": "MNGEQQIDADAGSSVEEVELSWEDYLEETGSTAVPYGSFKHVDTRLQNGFAPGMKLEVVVKTNPEAYWVATIITTCEQLLLLRYDGYGEDRRADFWCDIRKADLYPIGWCEQNKKTLEAPEGIRDKVSDWNEFLRQTLMGACSPPVPLLEGLRNGRNPLDLIAPGSRLECQAFQDSLSTWIVTVVDNIGGRLKLRYEGLESSDNFELWLYYLDPFLHHVGWAAQQGYELQPPLAIKHLKNEDEWQEILTKVKEEEEEPLPSYLFKDKPVIGMHSFSVNMKLEAVDPWSPFGICPATVVKVFDEKYFLVEMDDLRPENHAQRSFVCHANSPGIFPVQWSLKNGLHISPPPGYPGQDFDWADYLKQCGAEAAPQRCFPPSISEHEFKENMKLEAVNPLLPEEVCVATITAVRGSYLWLQLEGSKKPIPEFIVNVESMDIFPLGWCETNGHPLSAPRRARVHKQRKIAVVQPEKQIPSSRAVHEGLKNQELNSTDSVMVNGKYCCPKIYFNHRCFSGPYLNKGRIAELPQCVGPGNCVLVLREVLTLLINAAYKPSRVLRELQLDKDSVWHGCGEVLKAKYKGKSYRATVEIVKTADRVTEFCRQTCIKLECCPNLFGPRMVLDKCSENCSVLTKTKYTHYYGKKKNKRIGRPPGGHSNLACALKKASKRRKRRKNVFVHKKKRSSTSVDNTPAGSPQGSGGEDEDDPDEGDDDSLSEGSTSEQQDELQEESEMSEKKSCSSSPTQSEISTSIPPDRQRRKRELRTFSFSDDENKPPSPKEIRIEVAERLHLDTNPLKWSVADVVRFIRSTDCAPLARIFLDQEIDGQALLLLTLPTVQECMDLKLGPAIKLCHHIERIKFAFYEQFAN", "length": 866, "header": "tr|A0A4X1VLZ5-1|A0A4X1VLZ5_PIG Isoform 1 of Scm like with four mbt domains 1 OS=Sus scrofa OX=9823 GN=SFMBT1 PE=4 SV=1 CANONICAL=A0A4X1VLZ5-1" }, "locus": { "chromosome": "13", "start_pos": 35101281, "end_pos": 35026416, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047889.3", "url": "https://www.ensembl.org/id/ENSSSCT00000047889.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000039479.1", "url": "https://www.ensembl.org/id/ENSSSCP00000039479.1" } ] } }, { "isoform_ac": "A0A8W4FMZ2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FMZ2/entry", "sequence": { "sequence": "MNGEQQIDADAGSSVEEVELSWEDYLEETGSTAVPYGSFKHVDTRLQNGFAPGMKLEVVVKTNPEAYWVATIITTCEQLLLLRYDGYGEDRRADFWCDIRKADLYPIGWCEQNKKTLEAPELRNGRNPLDLIAPGSRLECQAFQDSLSTWIVTVVDNIGGRLKLRYEGLESSDNFELWLYYLDPFLHHVGWAAQQGYELQPPLAIKHLKNEDEWQEILTKVKEEEEEPLPSYLFKDKPVIGMHSFSVNMKLEAVDPWSPFGICPATVVKVFDEKYFLVEMDDLRPENHAQRSFVCHANSPGIFPVQWSLKNGLHISPPPGYPGQDFDWADYLKQCGAEAAPQRCFPPSISEHEFKENMKLEAVNPLLPEEVCVATITAVRGSYLWLQLEGSKKPIPEFIVNVESMDIFPLGWCETNGHPLSAPRRARVHKQRKIAVVQPEKQIPSSRAVHEGLKNQELNSTDSVMVNGKYCCPKIYFNHRCFSGPYLNKGRIAELPQCVGPGNCVLVLREVLTLLINAAYKPSRVLRELQLDKDSVWHGCGEVLKAKYKGKSYRATVEIVKTADRVTEFCRQTCIKLECCPNLFGPRMVLDKCSENCSVLTKTKYTHYYGKKKNKRIGRPPGGHSNLACALKKASKRRKRRKNVFVHKKKRSSTSVDNTPAGSPQGSGGEDEDDPDEGDDDSLSEGSTSEQQDELQEESEMSEKKSCSSSPTQSEISTSIPPDRQRRKRELRTFSFSDDENKPPSPKEIRIEVAERLHLDTNPLKWSVADVVRFIRSTDCAPLARIFLDQEIDGQALLLLTLPTVQECMDLKLGPAIKLCHHIERIKFAFYEQFAN", "length": 836, "header": "tr|A0A8W4FMZ2-1|A0A4X1VLZ5_PIG Computationally mapped isoform of Scm like with four mbt domains 1 OS=Sus scrofa OX=9823 GN=SFMBT1 PE=4 SV=1 CANONICAL=A0A4X1VLZ5-1" }, "locus": { "chromosome": "13", "start_pos": 35101281, "end_pos": 35026416, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000104307.1", "url": "https://www.ensembl.org/id/ENSSSCT00000104307.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080724.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080724.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FMZ2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FMZ2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152413", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152413", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0ABI0P5B6-1", "protein_name": "Scm like with four mbt domains 1", "gene_name": "SFMBT1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNGEQQTDADAGSGVEEVELSWEDYLEETGSTAVPYGSFKHVDTRLQNGFAPGMKLEVAVKTDPETYWVATIITTCEQLLLLRYDGYGEDRRADFWCDIRKADLYPIGWCEQNKKTLEAPEGIRDKVSDWDEFLRQTLTGACSPPVPLLEGLRNGRNPLDLIAPGSRLECQAFQDSLSTWIVTVVDNIGGRLKLRYEGLEGSDNVEHWLYYLDPFLHHVGWAAQQGYELQPPSAIRHLKNEAEWQEILAKVKEEEEPLPSYLFKDKRVIGTHSFSVNMKLEAVDPWSPFGISPATVVKVFDEKYFLVEMDDLRLENRGQRSFVCHTDSPGIFPVQWSLKNGLHISPPPGYQGQDFDWADYLKQCGAEAAPQRCFPPSISEHEFKENMKLEAVNPLLPEEVCVATITAVRGSYLWLQLEGSKKPIPEFIVNVESMDIFPLGWCETNGHPLSTPRRARVHKQRKIAVVQPEKQIPSSRTVHEGLKNQELSSTDSVVINGKYCCPKIYFNHRCFSGPYLNKGRIAELPQCVGPGNCVLVLREVLTLLINAAYKPSRVLRELQLDKDSVWHGCGEVLKAKYKGKSYRATVEIVKTADRVTEFCRQTCIKLECCPNLFGPRMVLDKCSENCSVLTKTKYTHYYGKKKNKRIGRPPGGHSNLACALKKASKRRKRRKNVFVHKKKRSSASVDNTPAGSPQGSGGEDEEDPDEGDDDSLSEGSTSEQQDELQEESEMSEKKSCSSSPTQSEISTSLPPDRQRRKRELRTFSFSDDENKPPSPKEIRIEVAERLHLDSNPLKWSVADVVRFIRSTDCAPLARIFLDQEIDGQALLLLTLPTVQECMDLKLGPAIKLCHHIERIKFAFYEQFAN", "length": 865 }, "evidence": [ { "id": "A0A4X1VLZ5", "url": "https://omabrowser.org/oma/group/A0A4X1VLZ5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9JMD1-1", "protein_name": "Scm-like with four MBT domains protein 1", "gene_name": "Sfmbt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGEQQLDADLGSGVEVEEFSWEDYLEETGSTTVPYASFKHVDIRLQNGFAPGMKLEVALKNDPETYWVATIITACEQLLLLRYEGYGEDRKADFWCDIRKAGLYPIGWCQQNKKTLEAPEGIRDKVSDWNAFLQQTLIGACGPPVSLLEGLRNGRNPLDLIAPGSKLECQDFRDSLSTWLVTVVENIGGRLKLRYEGLESRDGFEHWLYYLDPFLHHIGWAAQQGCDLQPPLAIKHLKSEADWQEILAKVKEEEPLPSYLFKDKQVIGTHEFSINMKLEAVDPWSPFGISPATIAKVFDDKYFLVEMDDLRPEDHTRRSFVCHANSPGIFPVQWSLKNGLHINPPPGFRSQDFDWADYLKQCGAEAAPQKCFPQSISEHQFKENMKLEAVNPLFPEEVCIATVTAVRGSYLWLQLEGSKKPVPEFIVSAESMNIFPLGWCETNGHPLSTPRRARGHKLRKIAVVQPEKQILSSRTVHEGLKNQLNSTHSVMINGKYCCPKIYFNHRCFSGPYLNKGRIAELPQCVGPGNCVLVLREVLTLLINAAYKPSRVLRELQLDKDSVWHGCGEVLKAKYKGKSYRATVEIVRTADRVTEFCRQTCIKLECCPNLFGPRMVLDTCSENCSVLTKTKYTHYYGKKKNKRIGRPPGGHSNLSCALKKSSKRRKRRKNIFVHKKKRSSASVDNTPVGSPQGSGGEDEEDADDGDEDSLTEGSTSEQQEELQEESEVSEKKSSSSSPTQSETPTPLPPDTQTNKRDAQTSSVSDDENKPPSPKEIRIEVDERLHLDSNPLKWSVADVVRFIRSTDCAPLARIFLDQEIDGQALLLLTLPTVQECMDLKLGPAIKLCHHIERIKFAFYEQFAN", "length": 863 }, "evidence": [ { "id": "A0A4X1VLZ5", "url": "https://omabrowser.org/oma/group/A0A4X1VLZ5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JMD2-1", "protein_name": "Scm-like with four MBT domains protein 1", "gene_name": "Sfmbt1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNGEQQLDADLGSGVEVEEFSWEDYLEETGATTAPYASFKHVDICLQSGFAPGMKLEVALRKDPETYWVATVITACEQLLLLRYEGYGEDRKADFWCDIRRAGLYPIGWCQQNKKTLEAPEGIRDKVSDWSAFLQRTLTGACGPPVALLEGLRNGRNPLDLIAPGSRLECQDFRDSVSTWIVTVVENIGGRLKLQYEGLERHDGFEHWLYYLDPFLHHIGWAAQQGYELQPPLAIRHLKNEADWQEILARVKEEEPLPSYLFKDKQVIRTHEFSINMKLEAVDPWSPFGISPATIAKVFDDKYFLVEIDDLRPEDHARRSFVCHANSPGIFPVQWSLKNGLHINPPPGFRSQDFDWADYLKQCGAEAAPQKCFPQSVSEHQFKENMKLEAVNPLFPEEVSIATVTAVRGSYLWLQLEGSKKPVPEFIVSVESMNIFPLGWCETNGHPLSTPRRARGHKLRKIAVVQPEKQILSSRTVHEGLKNQLNSPHSVMINGKYCCPKIYFNHRCFSGPYLNKGRIAELPQCVGPGNCVLVLREVLTLLINAAYKPSRVLRELQLDKDSVWHGCGEVLKAKYKGKSYRATVEIVRTADRVTEFCRQTCIKLECCPNLFGPRMVLDTCSENCSVLTKTKYTHYYGKKKNKRIGRPPGGHSNLSCALKKTSKRRKRRKNIFVHKKKRSSASVDNTPVGSPQGSGGEDEDDADDGDDDSLTEGSTSEQQDELHEESEVSEKKSCSPSPTQSEMSTPLPPDTQTDKREAQTSSLSDGENKPPSPKEIRIEVDERLHLDSNPLKWSVADVVRFIRSTDCAPLARIFLDQEIDGQALLLLTLPTVQECMDLKLGPAIKLCHHIERIKFAFYEQFAN", "length": 863 }, "evidence": [ { "id": "A0A4X1VLZ5", "url": "https://omabrowser.org/oma/group/A0A4X1VLZ5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9UHJ3-1", "protein_name": "Scm-like with four MBT domains protein 1", "gene_name": "SFMBT1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNGEQQLDADAGSGMEEVELSWEDYLEETGSTAVPYGSFKHVDTRLQNGFAPGMKLEVAVRTDPETYWVATVITTCEQLLLLRYDGYGEDRRADFWCDIRKADLYPIGWCEQNKKTLEAPEGIRDKVSDWDEFLRQTLIGACSPPVPLLEGLRNGRNPLDLIAPGSRLECQAFQDSLSTWIVTVVENIGGRLKLRYEGLESSDNYEHWLYYLDPFLHHVGWAAQQGYELQPPSAIRHLKNEAEWQEILAKVKEEEEEPLPSYLFKDKQVIGIHTFSVNMKLEAVDPWSPFGISPATVVKVFDEKYFLVEMDDLRPENHARRSFVCHADSPGIFPVQWSLKNGLHISPPPGYPSQDFDWADYLKQCGAEAAPQRCFPPLISEHEFKENMKLEAVNPILPEEVCVATITAVRGSYLWLQLEGSKKPIPECIVSVESMDIFPLGWCETNGHPLSTPRRARVYKQRKIAVVQPEKQVPSSRTVHEGLRNQELNSTESVMINGKYCCPKIYFNHRCFSGPYLNKGRIAELPQCVGPGNCVLVLREVLTLLINAAYKPSRVLRELQLDKDSVWHGCGEVLKAKYKGKSYRATVEIVKTADRVTEFCRQTCIKLECCPNLFGPRMVLDKCSENCSVLTKTKYTHYYGKKKNKRIGRPPGGHSNLACALKKASKRRKRRKNVFVHKKKRSSASVDNTPAGSPQGSGGEDEDDPDEGDDDSLSEGSTSEQQDELQEESEMSEKKSCSSSPTQSEISTSLPPDRQRRKRELRTFSFSDDENKPPSPKEIRIEVAERLHLDSNPLKWSVADVVRFIRSTDCAPLARIFLDQEIDGQALLLLTLPTVQECMDLKLGPAIKLCHHIERIKFAFYEQFAN", "length": 866 }, "evidence": [ { "id": "A0A4X1VLZ5", "url": "https://omabrowser.org/oma/group/A0A4X1VLZ5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "negative regulation of muscle organ development", "id": "GO:0048635", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048635", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VLZ5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VLZ5" } ], "pmid": "" }, { "name": "negative regulation of DNA-templated transcription", "id": "GO:0045892", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045892", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VLZ5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VLZ5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "chromatin binding", "id": "GO:0003682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003682", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VLZ5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VLZ5" } ], "pmid": "" }, { "name": "transcription corepressor activity", "id": "GO:0003714", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003714", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VLZ5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VLZ5" } ], "pmid": "" }, { "name": "histone binding", "id": "GO:0042393", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042393", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VLZ5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VLZ5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VLZ5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VLZ5" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VLZ5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VLZ5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 489, "end_pos": 491, "annotation": "n_glycosylation_sequon" }, { "start_pos": 626, "end_pos": 628, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1VLZ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VLZ5" }, { "id": "PS51079", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51079" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "MBT", "eco_id": "ECO_0000259", "start_pos": 20, "end_pos": 120, "start_aa": "Leu", "end_aa": "Pro", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": 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N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VMF9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VMF9#function" }, { "database": "UniProtKB", "id": "RU367008", "url": "https://www.uniprot.org/uniprotkb/RU367008#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VMF9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VMF9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TMEM258", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VMF9", "locus": { "chromosome": "2", "start_pos": 9760895, "end_pos": 9757033, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000027538", "url": "https://www.ensembl.org/id/ENSSSCG00000027538" } ] } } ], "crossref": [ { "id": "A0A4X1VMF9", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VMF9", "database": "AlphaFoldDB", "categories": [] }, { "id": "100517573", "url": "https://www.ncbi.nlm.nih.gov/gene/100517573", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007915", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007915", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100517573", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517573", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MERYVGP", "url": "https://omabrowser.org/oma/group/MERYVGP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VMF9", "url": "https://www.orthodb.org/?gene=A0A4X1VMF9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13636", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13636", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05251", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05251", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-9768727", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9768727", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9931295", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9931295", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003122674", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003122674", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VMF9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VMF9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VMF9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VMF9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MELEAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVASLFMGFGVLFLLLWVGIYV", "length": 79, "header": "tr|A0A4X1VMF9-1|A0A4X1VMF9_PIG Isoform 1 of Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit TMEM258 OS=Sus scrofa OX=9823 GN=TMEM258 PE=3 SV=1 CANONICAL=A0A4X1VMF9-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VMF9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VMF9/entry", "sequence": { "sequence": "MELEAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVASLFMGFGVLFLLLWVGIYV", "length": 79, "header": "tr|A0A4X1VMF9-1|A0A4X1VMF9_PIG Isoform 1 of Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit TMEM258 OS=Sus scrofa OX=9823 GN=TMEM258 PE=3 SV=1 CANONICAL=A0A4X1VMF9-1" }, "locus": { "chromosome": "2", "start_pos": 9760029, "end_pos": 9757078, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032340.2", "url": "https://www.ensembl.org/id/ENSSSCT00000032340.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020417.1", "url": "https://www.ensembl.org/id/ENSSSCP00000020417.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VMF9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VMF9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100517573", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517573", "resource": "KEGG Pathway" }, { "id": "R-SSC-9768727", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9768727", "resource": "Reactome", "description": "Regulation of CDH1 posttranslational processing and trafficking to plasma membrane" }, { "id": "R-SSC-9931295", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9931295", "resource": "Reactome", "description": "PD-L1(CD274) glycosylation and translocation to plasma membrane" } ], "orthologs": [ { "uniprot_canonical_ac": "D3ZS52-1", "protein_name": "Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit TMEM258", "gene_name": "Tmem258b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELEAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDVYKELLISLVASLFMGFGVLFLLLWVGIYV", "length": 79 }, "evidence": [ { "id": "A0A4X1VMF9", "url": 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"https://www.uniprot.org/uniprotkb/A0A4X1VMS1/entry", "sequence": { "sequence": "MIPRKRYGSKNTDQGVYLGLSKTQVLSPATAGSSSSDIAPLPPPVALAPPPPDTMSCRDRTQEFLSACKSLQSRQNGIQTNKPALRAVRQRSEFTLMAKRIGKDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSRAPVSALPLAPNHLGGGAVVLGAESRASGDVAIDMMDSRTSQQLQLIDEQDSYIQTRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRWLMVKIFLILIVFFIIFVVFLA", "length": 355, "header": "tr|A0A4X1VMS1-1|A0A4X1VMS1_PIG Isoform 1 of Syntaxin-5 OS=Sus scrofa OX=9823 GN=STX5 PE=1 SV=1 CANONICAL=A0A4X1VMS1-1" }, "locus": { "chromosome": "2", "start_pos": 8967928, "end_pos": 8938614, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000097514.1", "url": "https://www.ensembl.org/id/ENSSSCT00000097514.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075356.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075356.1" } ] } }, { "isoform_ac": "I3LPE5-1", "url": "https://www.uniprot.org/uniprotkb/I3LPE5/entry", "sequence": { "sequence": "MIPRKRYGSKNTDQGVYLGLSKTQVLSPATAGSSSSDIAPLPPPVALAPPPPDTMSCRDRTQEFLSACKSLQSRQNGIQTNKPALRAVRQRSEFTLMAKRIGKDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSRAPVSALPLAPNHLGGGAVVLGAESRASGDVAIDMMDSRTSQQLQLIDEQDSYIQTRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQSVTLFPLLSALSPGSTRTC", "length": 321, "header": "tr|I3LPE5-1|A0A4X1VMS1_PIG Computationally mapped isoform of Syntaxin-5 OS=Sus scrofa OX=9823 GN=STX5 PE=1 SV=3 CANONICAL=A0A4X1VMS1-1" }, "locus": { "chromosome": "2", "start_pos": 8967788, "end_pos": 8938614, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023508.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023508.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000025972.3", "url": "https://www.ensembl.org/id/ENSSSCP00000025972.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LPE5", "url": "https://www.uniprot.org/uniprotkb/I3LPE5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100628048", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100628048", 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"resource": "Reactome", "description": "RHOC GTPase cycle" }, { "id": "R-SSC-9013408", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013408", "resource": "Reactome", "description": "RHOG GTPase cycle" }, { "id": "R-SSC-9609523", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9609523", "resource": "Reactome", "description": "Insertion of tail-anchored proteins into the endoplasmic reticulum membrane" } ], "orthologs": [ { "uniprot_canonical_ac": "Q01590-1", "protein_name": "Integral membrane protein SED5", "gene_name": "SED5", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MNIKDRTSEFQQSVLSYKKRNKNFREQQRERLQEKESENFANNTTGNGKSVSEFQKKASGIAHEISSTAQLLSKLAVLAKRKPMFNDNPVEIAELSFLIKRKIYAIEQSLVQLSQLKKTDVNGNTSNQSSKQPSAVQHSKNVVNLLNTQMKNISGSFKDVLEERQRLEMANKDRWQKLTTDTGHAPADDQTQSNHAADLTTYNNSNPFMTSLLDESSEKNNNSSNQGELSFPQNDSQLMLMEEGQLSNNVYLQERNRAVETIESTIQEVGNLFQQLASMVQEQGEVIQRIDANVDDIDLNISGAQRELLKYFDRIKSNRWLAAKVFFIIFVFFVIWVLVN", "length": 340 }, "evidence": [ { "id": "A0A4X1VMS1", "url": "https://omabrowser.org/oma/group/A0A4X1VMS1/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q08851-1", "protein_name": "Syntaxin-5", "gene_name": "Stx5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"database": "UniProtKB", "id": "A0A4X1VMS1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VMS1" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VMS1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VMS1" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VMS1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VMS1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 9, "go_terms": [ { "name": "intracellular protein transport", "id": "GO:0006886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006886", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VMS1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VMS1" } ], "pmid": "" }, { "name": "endoplasmic reticulum to Golgi vesicle-mediated transport", "id": "GO:0006888", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006888", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VMS1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VMS1" } ], "pmid": "" }, { "name": "positive regulation of protein catabolic process", "id": "GO:0045732", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045732", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VMS1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VMS1" } ], "pmid": "" }, { "name": "vesicle fusion", "id": "GO:0006906", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006906", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VMS1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VMS1" } ], "pmid": "" }, { "name": "vesicle docking", "id": "GO:0048278", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048278", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VMS1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VMS1" } ], "pmid": "" }, { "name": "Golgi disassembly", "id": "GO:0090166", "url": 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"protein_names": [ { "name": "Zinc finger protein 174", "type": "synonym", "evidence": [ { "id": "A0A4X1VNH3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VNH3/entry#names_and_taxonomy" } ] }, { "name": "zinc finger protein 174", "type": "synonym", "evidence": [ { "id": "XP_003481110", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003481110" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VNH3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VNH3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZNF174", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VNH3", "locus": { "chromosome": "3", "start_pos": 38805020, "end_pos": 38815171, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000007958", "url": "https://www.ensembl.org/id/ENSSSCG00000007958" } ] } } ], "crossref": [ { "id": "cd07936", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07936", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100520731", "url": "https://www.ncbi.nlm.nih.gov/gene/100520731", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003309", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003309", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038269", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038269", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050916", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050916", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100520731", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520731", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QHWEKSQ", "url": "https://omabrowser.org/oma/group/QHWEKSQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VNH3", "url": "https://www.orthodb.org/?gene=A0A4X1VNH3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR45935", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45935", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45935:SF15", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45935:SF15", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02023", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02023", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003481110", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003481110", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VNH3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VNH3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VNH3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VNH3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VTX0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTX0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VTX0-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTX0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAKMEITLNSQCHIQASSKQERHIIGKLEEKREPAQQKDWPDPELSRQNFRRFCYQEASGPQEALSRLRQLCRQWLQPEVHTKEQILELLVVEQFLNILPPEIQARARRRCPVSSKEIVTLVEDFHRAAKGPKQWVAVCMEGQKVLLEKTGSQLGEQELPDFQPQTPRRHPRESPLEETSQEGSQDQRSPHPREKSPLLQEPAPKLAGTEAPRMKSDNKENPQQEGAKGAKPCTLSAGRPKGNGLQSPEPRGATVSELRLSRRQVSPSNAPKPFAHYQRHCRELDFISSPLKSHPLRELKKSKGSRRSLSSRLQRLGHQPAHSAKKPYKCDDCGKSFTWNSELKRHKRVHTGERPYTCVECGNCFGRQSTLKLHQRIHTGEKPYQCGQCGKSFRQSSNLHQHHRLHHGD", "length": 410, "header": "tr|A0A4X1VNH3-1|A0A4X1VNH3_PIG Isoform 1 of Zinc finger protein 174 OS=Sus scrofa OX=9823 GN=ZNF174 PE=3 SV=1 CANONICAL=A0A4X1VNH3-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VNH3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VNH3/entry", "sequence": { "sequence": "MAAKMEITLNSQCHIQASSKQERHIIGKLEEKREPAQQKDWPDPELSRQNFRRFCYQEASGPQEALSRLRQLCRQWLQPEVHTKEQILELLVVEQFLNILPPEIQARARRRCPVSSKEIVTLVEDFHRAAKGPKQWVAVCMEGQKVLLEKTGSQLGEQELPDFQPQTPRRHPRESPLEETSQEGSQDQRSPHPREKSPLLQEPAPKLAGTEAPRMKSDNKENPQQEGAKGAKPCTLSAGRPKGNGLQSPEPRGATVSELRLSRRQVSPSNAPKPFAHYQRHCRELDFISSPLKSHPLRELKKSKGSRRSLSSRLQRLGHQPAHSAKKPYKCDDCGKSFTWNSELKRHKRVHTGERPYTCVECGNCFGRQSTLKLHQRIHTGEKPYQCGQCGKSFRQSSNLHQHHRLHHGD", "length": 410, "header": "tr|A0A4X1VNH3-1|A0A4X1VNH3_PIG Isoform 1 of Zinc finger protein 174 OS=Sus scrofa OX=9823 GN=ZNF174 PE=3 SV=1 CANONICAL=A0A4X1VNH3-1" }, "locus": { "chromosome": "3", "start_pos": 38814373, "end_pos": 38807918, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102556.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102556.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078724.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078724.1" } ] } }, { "isoform_ac": "A0A4X1VTX0-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTX0/entry", "sequence": { "sequence": "MAAKMEITLNSQCHIQASSKQERHIIGKLEEKREPAQQKDWPDPELSRQNFRRFCYQEASGPQEALSRLRQLCRQWLQPEVHTKEQILELLVVEQFLNILPPEIQARARRRCPVSSKEIVTLVEDFHRAAKGPKQWVAVCMEGQKVLLEKTGSQLGEQELPDFQPQTPRRHPRESPLEETSQEGSQDQRSPHPREKSPLLQEPAPKLAGTELLIVKTNPGMTTDEPFNLWLSVVT", "length": 235, "header": "tr|A0A4X1VTX0-1|A0A4X1VNH3_PIG Computationally mapped isoform of Zinc finger protein 174 OS=Sus scrofa OX=9823 GN=ZNF174 PE=3 SV=1 CANONICAL=A0A4X1VNH3-1" }, "locus": { "chromosome": "3", "start_pos": 38814373, "end_pos": 38812401, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008721.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008721.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008497.5", "url": "https://www.ensembl.org/id/ENSSSCP00000008497.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VTX0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTX0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100520731", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520731", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3S5ZP49-1", "protein_name": "Zinc finger protein 174", "gene_name": "ZNF174", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAAKMEITLSSQSHIQAFSKQERHIIAKLEEKREPALQEDWPDPELSRQSFRRFCYQEASGPQEALSHLRQLCRQWLQPEVHTKEQILELLVLEQFLNILPAEIQARARHRCPVSSKEIVTLVEDFHRAAKGPKQWVAVCMEGQKVLLEKTGSQLGEQELPDFQPQTPRRYPREETFQAGSQDQRSPPHWEKSLLLQEPTSRLAETETPRTKSDNKENPQQEGAKGAKPCVLSVGRPKGSGLQSPEPRGASLSEPRLSQRQFSTPSAQKPFAHYQRHCRELEYIGAPLKSHPLRELKKSKGSRRSLSNHLQRLSHQPARSAKKPYKCDECGKSFTWNSELKRHQRVHTGERPYTCGECGNCFGRQSTLKLHQRIHTGEKPYQCGQCGKSFRQSSNLHQHHRLHHGD", "length": 406 }, "evidence": [ { "id": "A0A4X1VNH3", "url": "https://omabrowser.org/oma/group/A0A4X1VNH3/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "D3ZNW1-1", "protein_name": "Zinc finger protein 174", "gene_name": "Zfp174", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAKMEITLSNPTEDSDKQERHIIMKLEEKRTPTQRKASPDPELSRQSFRHFCYQEVSGPQEALSCLRQLCRQWLRPELHTKEQILELLVMEQFLVILPPEIQAQVWHRYPKSSREIVTLVEDLHTASKKPKQWVTVCMQGQKVLLEKTGAQLIEQELRDFQPQTPSRDIQENSLEEPSWERSHEQLSPHHWEKSLLQEPALRLTETESSRMRSDDKENPHPEGTRGAKACTVLRGRPKGGTLHSPEPGGVTASDPRLLQWQVRPPQSPKPLPHYQRHCRELEYISNPLRGPPLRELKRSRGGRRSLSSLLQRLGHQAAHSAKPYRCDDCGKSFTWNSELKRHTRVHTGERPYICGECGNCFGRQSTLKLHQRIHTGEKPYQCSHCGKCFRQSSNLHQHHRLHHGN", "length": 406 }, "evidence": [ { "id": "A0A4X1VNH3", "url": "https://omabrowser.org/oma/group/A0A4X1VNH3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q15697-1", "protein_name": "Zinc finger protein 174", "gene_name": "ZNF174", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"https://www.ncbi.nlm.nih.gov/gene/100736677", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000367", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000367", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001019", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001019", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011025", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011025", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100736677", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100736677", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KEFFEHA", "url": "https://omabrowser.org/oma/group/KEFFEHA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VNM1", "url": "https://www.orthodb.org/?gene=A0A4X1VNM1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "I3LRX8", "url": "https://www.orthodb.org/?gene=I3LRX8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10218", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10218", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10218:SF233", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10218:SF233", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00503", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00503", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-170660", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-170660", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-170670", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-170670", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003482083", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003482083", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VNM1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VNM1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VNM1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VNM1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LRX8", "url": "https://www.uniprot.org/uniprotkb/I3LRX8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LRX8-1", "url": "https://www.uniprot.org/uniprotkb/I3LRX8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGCLGNSKTSEDQGVDEKERREANKKIEKQLQKERLAYKATHRLLLLGAGESGKSTIVKQMRILHVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKSIAPITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTDQDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSYNMVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPEYANYTVPEDATPDAGEDPKVTRAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLKQYELL", "length": 380, "header": "tr|A0A4X1VNM1-1|A0A4X1VNM1_PIG Isoform 1 of G protein subunit alpha L OS=Sus scrofa OX=9823 GN=GNAL PE=3 SV=1 CANONICAL=A0A4X1VNM1-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VNM1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VNM1/entry", "sequence": { "sequence": "MGCLGNSKTSEDQGVDEKERREANKKIEKQLQKERLAYKATHRLLLLGAGESGKSTIVKQMRILHVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKSIAPITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTDQDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSYNMVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPEYANYTVPEDATPDAGEDPKVTRAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLKQYELL", "length": 380, "header": "tr|A0A4X1VNM1-1|A0A4X1VNM1_PIG Isoform 1 of G protein subunit alpha L OS=Sus scrofa OX=9823 GN=GNAL PE=3 SV=1 CANONICAL=A0A4X1VNM1-1" }, "locus": { "chromosome": "6", "start_pos": 97408327, "end_pos": 97346060, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024927.3", "url": "https://www.ensembl.org/id/ENSSSCT00000024927.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024507.2", "url": "https://www.ensembl.org/id/ENSSSCP00000024507.2" } ] } }, { "isoform_ac": "I3LRX8-1", "url": "https://www.uniprot.org/uniprotkb/I3LRX8/entry", "sequence": { "sequence": "MGLCYSLRPLLFADSEPLAEGARYRLDPDPNTDKDSVRTPGQKERRQRADQQRAEEREAKRVSRNIDRRLREQKRDLRRTHRLLLLGAGESGKSTIVKQMRILHVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKSIAPITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTDQDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSYNMVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPEYANYTVPEDATPDAGEDPKVTRAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLKQYELL", "length": 419, "header": "tr|I3LRX8-1|A0A4X1VNM1_PIG Computationally mapped isoform of G protein subunit alpha L OS=Sus scrofa OX=9823 GN=GNAL PE=3 SV=2 CANONICAL=A0A4X1VNM1-1" }, "locus": { "chromosome": "6", "start_pos": 97429186, "end_pos": 97346060, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031272.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031272.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000026869.2", "url": "https://www.ensembl.org/id/ENSSSCP00000026869.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 311, "start_aa": "Thr", "end_pos": 311, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr311", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LRX8", "url": "https://www.uniprot.org/uniprotkb/I3LRX8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100736677", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100736677", "resource": "KEGG Pathway" }, { "id": "R-SSC-170660", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-170660", "resource": "Reactome", "description": "Adenylate cyclase activating pathway" }, { "id": "R-SSC-170670", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-170670", "resource": "Reactome", "description": "Adenylate cyclase inhibitory pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "E1BS74-1", "protein_name": "G protein subunit alpha L", "gene_name": "GNAL", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGCLGNSKTEDQRIDEKAQREANKKIEKQLQKERLAYKATHRLLLLGAGESGKSTIVKQMRILHVNGFNSEEKKQKILDIRKNVKDAIVTIVSAMSTLIPPVPLANPENQFRMDYIKSIAPLSDFDYTQEFFEHAKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSMDDYTPTDQDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVACSSYNMVIREDNNTNRLRESLDLFKSIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPEYAHYTVPEDATPDAGEDPKVTRAKFFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL", "length": 379 }, "evidence": [ { "id": "A0A4X1VNM1", "url": "https://omabrowser.org/oma/group/A0A4X1VNM1/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1N461-1", "protein_name": "G protein subunit alpha L", "gene_name": "GNAL", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGCLGNSKTSEDQGVDEKERREANKKIEKQLQKERLAYKATHRLLLLGAGESGKSTIVKQMRILHVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKSIAPITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTDQDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSYNMVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPEYANYTVPEDATPDAGEDPKVTRAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLKQYELL", "length": 380 }, "evidence": [ { "id": "A0A4X1VNM1", "url": "https://omabrowser.org/oma/group/A0A4X1VNM1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P38405-1", "protein_name": "Guanine nucleotide-binding protein G(olf) subunit alpha", "gene_name": "GNAL", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGCLGGNSKTTEDQGVDEKERREANKKIEKQLQKERLAYKATHRLLLLGAGESGKSTIVKQMRILHVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKSIAPITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTDQDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSYNMVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPEYANYTVPEDATPDAGEDPKVTRAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLKQYELL", "length": 381 }, "evidence": [ { "id": "A0A4X1VNM1", "url": "https://omabrowser.org/oma/group/A0A4X1VNM1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P38406-1", "protein_name": "Guanine nucleotide-binding protein G(olf) subunit alpha", "gene_name": "Gnal", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGCLGNSSKTAEDQGVDEKERREANKKIEKQLQKERLAYKATHRLLLLGAGESGKSTIVKQMRILHVNGSNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKSIAPITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTDQDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSYNMVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPEYANYTVPEDATPDAGEDPKVTRAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLKQYELL", "length": 381 }, "evidence": [ { "id": "A0A4X1VNM1", "url": "https://omabrowser.org/oma/group/A0A4X1VNM1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8CGK7-1", "protein_name": "Guanine nucleotide-binding protein G(olf) subunit alpha", "gene_name": "Gnal", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGCLGNSSKTAEDQGVDEKERREANKKIEKQLQKERLAYKATHRLLLLGAGESGKSTIVKQMRILHVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKSIAPITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTDQDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSYNMVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPEYANYTVPEDATPDAGEDPKVTRAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLKQYELL", "length": 381 }, "evidence": [ { "id": "A0A4X1VNM1", "url": "https://omabrowser.org/oma/group/A0A4X1VNM1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 6, "go_terms": [ { "name": "GTPase activity", "id": "GO:0003924", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003924", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VNM1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VNM1" } ], "pmid": "" }, { "name": "GTP binding", "id": "GO:0005525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005525", 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"enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 311 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 247, "end_pos": 249 }, { "start_pos": 303, "end_pos": 305 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ 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"MASPIPVGVTKEQAFSMAQTEMEYRVELFNKLAQTCFNKCVDKRYKEAELNMGENSCIDRCVSKYWQVNGMVGQLLSAGKPPV", "length": 83 }, "evidence": [ { "id": "A0A4X1VQG5", "url": "https://omabrowser.org/oma/group/A0A4X1VQG5/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "mitochondrial intermembrane space chaperone complex", "id": "GO:0042719", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042719", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VQG5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VQG5" } ], "pmid": "" }, { "name": "TIM22 mitochondrial import inner membrane insertion complex", "id": "GO:0042721", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042721", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VQG5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VQG5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { 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When ubiquitinated, cleaves 'Lys-63'-linked and 'Lys-48'-linked poly-ubiquitin chains (in vitro), hence may act as a deubiquitinating enzyme. May increase macropinocytosis and suppress clathrin- and caveolae-mediated endocytosis. May enhance membrane dynamics and cell motility independently of its catalytic activity.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VQG9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VQG9#function" }, { "database": "UniProtKB", "id": "ARBA00037708", "url": "https://www.uniprot.org/uniprotkb/ARBA00037708#function" }, { "database": "UniProtKB", "id": "A0A4X1VR79", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR79#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VR79", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR79" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "JOSD1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR79", "locus": { "chromosome": "5", "start_pos": 9335041, "end_pos": 9321640, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000039555", "url": "https://www.ensembl.org/id/ENSSSCG00000039555" } ] } } ], "crossref": [ { "id": "100520958", "url": "https://www.ncbi.nlm.nih.gov/gene/100520958", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006155", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006155", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040053", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040053", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100520958", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520958", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PPHIYHE", "url": "https://omabrowser.org/oma/group/PPHIYHE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VR79", "url": "https://www.orthodb.org/?gene=A0A4X1VR79", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13291", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13291", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13291:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13291:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02099", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02099", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-5689877", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5689877", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_013843653", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013843653", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VQG9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VQG9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VQG9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VQG9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VR79", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR79", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VR79-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR79-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSCVPWKGDKAKSESLELPQAAPPQIYHEKQRRELCALHALNNVFQDSNAFTRETLQEIFQRLSPNTMVTPHKKSMLGNGNYDVNVIMAALQTKGYEAVWWDKRRDVGAIALTNVMGFIMNLPSSLCWGPLKLPLKRQHWICVREVGGAYYNLDSKLKMPEWIGGESELRKFLKHHLRGKNCELLLVVPEEVEAHQSWRADV", "length": 202, "header": "tr|A0A4X1VR79-1|A0A4X1VR79_PIG Isoform 1 of Josephin-1 OS=Sus scrofa OX=9823 GN=JOSD1 PE=4 SV=1 CANONICAL=A0A4X1VR79-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VQG9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VQG9/entry", "sequence": { "sequence": "MSCVPWKGDKAKSESLELPQAAPPQIYHEKQRRELCALHALNNVFQDSNAFTRETLQEIFQRLSPNTMVTPHKKSMLGNGNYDVNVIMAALQTKGYEAVWWDKRRDVGAIALTNVMGFIMNLPSSLCWGPLKLPLKRQHWICVREVGGAYYNLDSKLKMPEWIGGESELRVSYVRDLNLGWLVRR", "length": 185, "header": "tr|A0A4X1VQG9-1|A0A4X1VR79_PIG Computationally mapped isoform of Josephin-1 OS=Sus scrofa OX=9823 GN=JOSD1 PE=4 SV=1 CANONICAL=A0A4X1VR79-1" }, "locus": { "chromosome": "5", "start_pos": 9332013, "end_pos": 9323310, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066001.3", "url": "https://www.ensembl.org/id/ENSSSCT00000066001.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055113.2", "url": "https://www.ensembl.org/id/ENSSSCP00000055113.2" } ] } }, { "isoform_ac": "A0A4X1VR79-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR79/entry", "sequence": { "sequence": "MSCVPWKGDKAKSESLELPQAAPPQIYHEKQRRELCALHALNNVFQDSNAFTRETLQEIFQRLSPNTMVTPHKKSMLGNGNYDVNVIMAALQTKGYEAVWWDKRRDVGAIALTNVMGFIMNLPSSLCWGPLKLPLKRQHWICVREVGGAYYNLDSKLKMPEWIGGESELRKFLKHHLRGKNCELLLVVPEEVEAHQSWRADV", "length": 202, "header": "tr|A0A4X1VR79-1|A0A4X1VR79_PIG Isoform 1 of Josephin-1 OS=Sus scrofa OX=9823 GN=JOSD1 PE=4 SV=1 CANONICAL=A0A4X1VR79-1" }, "locus": { "chromosome": "5", "start_pos": 9332771, "end_pos": 9323310, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000096643.1", "url": "https://www.ensembl.org/id/ENSSSCT00000096643.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076930.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076930.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VQG9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VQG9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100520958", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520958", "resource": "KEGG Pathway" }, { "id": "R-SSC-5689877", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5689877", "resource": "Reactome", "description": "Josephin domain DUBs" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A1D5P643-1", "protein_name": "Josephin-1", "gene_name": "JOSD1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSCVPWKGDKAKSESPEPPQLLPPLHIYHEKQRRELCALHALNNVFQDSNAFTRETLQEIFQRLSPNTMVTPHKKSMLGNGNYDVNVIMAALQTKGYEAVWWDKRRDVNVIALSNVMGFIMNLPSSLCWGPLKLPLKRQHWICVREVGGTYYNLDSKLKMPEWIGGESELRKFLKHQLRGKNCELLLVVPEEVEAHQSWRADV", "length": 203 }, "evidence": [ { "id": "A0A4X1VR79", "url": "https://omabrowser.org/oma/group/A0A4X1VR79/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3I2J7-1", "protein_name": "Josephin-1", "gene_name": "Josd1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSCMPWKGDKAKSESLELPQAAPPQIYHEKQRRELCALHALNNVFQDSNAFTRETLQEIFQRLSPNTMVTPHKKSMLGNGNYDVNVIMAALQTKGYEAVWWDKRRDVGVIALTNVMGFIMNLPSSLCWGPLKLPLKRQHWICVREVGGAYYNLDSKLKMPEWIGGESELRKFLKYHLRGKNCELLLVVPEEVEAHQSWRADV", "length": 202 }, "evidence": [ { "id": "A0A4X1VR79", "url": "https://omabrowser.org/oma/group/A0A4X1VR79/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q15040-1", "protein_name": "Josephin-1", "gene_name": "JOSD1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSCVPWKGDKAKSESLELPQAAPPQIYHEKQRRELCALHALNNVFQDSNAFTRDTLQEIFQRLSPNTMVTPHKKSMLGNGNYDVNVIMAALQTKGYEAVWWDKRRDVGVIALTNVMGFIMNLPSSLCWGPLKLPLKRQHWICVREVGGAYYNLDSKLKMPEWIGGESELRKFLKHHLRGKNCELLLVVPEEVEAHQSWRTDV", "length": 202 }, "evidence": [ { "id": "A0A4X1VR79", "url": "https://omabrowser.org/oma/group/A0A4X1VR79/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5BJY4-1", "protein_name": "Josephin-1", "gene_name": "Josd1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSCMPWKGDKAKSESLELPQAAPPQIYHEKQRRELCALHALNNVFQDSNAFTRETLQEIFQRLSPNTVVTPHKKSMLGNGNYDVNVIMAALQTKGYEAVWWDKRRDVGVIALANVMGFIMNLPSSLCWGPLKLPLKRQHWICVREVGGAYYNLDSKLKMPEWIGGESELRKFLKYHLRGKNCELLLVVPEEVEAHQSWRADV", "length": 202 }, "evidence": [ { "id": "A0A4X1VR79", "url": "https://omabrowser.org/oma/group/A0A4X1VR79/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9DBJ6-1", "protein_name": "Josephin-1", "gene_name": "Josd1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSCVPWKGDKAKAESSDLPQAAPPQIYHEKQRRELCALHALNNVFQDSNAFTRETLQEIFQRLSPNTMVTPHKKSMLGNGNYDVNVIMAALQTKGYEAVWWDKRRDVGVIALTNVMGFIMNLPSSLCWGPLKLPLKRQHWICVREVGGAYYNLDSKLKMPEWIGGESELRKFLKYHLRGKNCELLLVVPEEVEAHQSWRADV", "length": 202 }, "evidence": [ { "id": "A0A4X1VR79", "url": "https://omabrowser.org/oma/group/A0A4X1VR79/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VR79", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR79" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VR79", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR79" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VR79", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR79" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VR79", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR79" } ], "pmid": "" }, { "name": "protein deubiquitination", "id": "GO:0016579", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016579", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VR79", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR79" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "cysteine-type deubiquitinase activity", "id": "GO:0004843", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004843", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VR79", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR79" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-5688797", "name": "ATXN3 family cleave Ub chains", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5688797", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5688797" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1VR79", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR79" }, { "id": "PS50957", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50957" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Josephin", "eco_id": "ECO_0000259", "start_pos": 23, "end_pos": 202, "start_aa": "Pro", "end_aa": "Val", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1VR06-1", "uniprot_ac": "A0A4X1VR06", "uniprot_id": "A0A4X1VR06_PIG", "mass": { "chemical_mass": 83156.0, "monoisotopic_mass": 83156.0 }, "refseq": { "ac": "XP_020951626", "name": "nucleolar GTP-binding protein 2 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020951626" }, "gene_names": [ { "name": "GNL2", "type": "recommended", "evidence": [ { "id": "A0A4X1VR06", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR06" } ] }, { "name": "GNL2", "type": "synonym", "evidence": [ { "id": "XP_020951626", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020951626" } ] } ], "protein_names": [ { "name": "Nucleolar GTP-binding protein 2", "type": "recommended", "evidence": [ { "id": "A0A4X1VR06", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR06/entry#names_and_taxonomy" } ] }, { "name": "nucleolar GTP-binding protein 2 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020951626", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020951626" } ] } ], "function": [ { "annotation": "GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. May promote cell proliferation possibly by increasing p53/TP53 protein levels, and consequently those of its downstream product CDKN1A/p21, and decreasing RPL23A protein levels.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VR06", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR06#function" }, { "database": "UniProtKB", "id": "ARBA00054763", "url": "https://www.uniprot.org/uniprotkb/ARBA00054763#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VR06", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR06" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GNL2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR06", "locus": { "chromosome": "6", "start_pos": 93619456, "end_pos": 93645959, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000031631", "url": "https://www.ensembl.org/id/ENSSSCG00000031631" } ] } } ], "crossref": [ { "id": "A0A4X1VR06", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VR06", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd01858", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01858", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100623150", "url": "https://www.ncbi.nlm.nih.gov/gene/100623150", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006073", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006073", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012971", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012971", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR024929", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024929", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR030378", "url": "https://www.ebi.ac.uk/interpro/entry/IPR030378", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050755", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050755", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100623150", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623150", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KNPEDHI", "url": "https://omabrowser.org/oma/group/KNPEDHI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VR06", "url": "https://www.orthodb.org/?gene=A0A4X1VR06", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11089", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11089", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11089:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11089:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01926", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01926", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08153", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08153", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020951626", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020951626", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VR06", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR06", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VR06-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR06-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVKPKYKGRSTINPSNASTNPDRVQGAGGQNMRDRATIRRLNMYRQKERRNSRGKVIKPLQYQSTVASGTVARVEPNIKWFGNTRVIKQSSLQKFQEEMDTVLKDPYKVVMKQSKLPMSLLHDRIRPHNSKVHILDTESFETTFGPKAQRKRPNLFASDMQSLIENAEMSTESYDQGKDRDLVAEDTGVRNEAQEEIYKKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHIETYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQDHPTLAFHASLTNPFGKGAFIQLLRQFGKLHTDKKQISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQYITLMRRIFLIDCPGVVYPSEDSETDIVLKGVVQVEKIKTPEDHIGAVLERAKPEYISKTYKIDSWENAEDFLEKLAFRTGKLLKGGEPDLRTVGKMVLNDWQRGRIPFFVKPPNAEPPATPQLPSASTLEVAPETAQNNTEEETPESGGGGSEPGLEKKEEEPGQCGADAEMQQILARVRQNFGKINVVPQFSGDDLVPLEMSDIEEELESLSGEREEEEEQEPQEDTDEEPFTEAQEEHTGSSTKAVIQALDEKIAKYQRFLDKAKAKKFSAVRISKGLSEKVFAKPEQQKAVEEDVEDTAPTKKGKKRKAQREEEHSDKTRRMLTSKERRRAARQQQPRKVGVRYYETHNVKNRNRNKKKTSDSEGQKQRRKKFKHKQ", "length": 730, "header": "tr|A0A4X1VR06-1|A0A4X1VR06_PIG Isoform 1 of Nucleolar GTP-binding protein 2 OS=Sus scrofa OX=9823 GN=GNL2 PE=3 SV=1 CANONICAL=A0A4X1VR06-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VR06-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR06/entry", "sequence": { "sequence": "MVKPKYKGRSTINPSNASTNPDRVQGAGGQNMRDRATIRRLNMYRQKERRNSRGKVIKPLQYQSTVASGTVARVEPNIKWFGNTRVIKQSSLQKFQEEMDTVLKDPYKVVMKQSKLPMSLLHDRIRPHNSKVHILDTESFETTFGPKAQRKRPNLFASDMQSLIENAEMSTESYDQGKDRDLVAEDTGVRNEAQEEIYKKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHIETYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQDHPTLAFHASLTNPFGKGAFIQLLRQFGKLHTDKKQISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQYITLMRRIFLIDCPGVVYPSEDSETDIVLKGVVQVEKIKTPEDHIGAVLERAKPEYISKTYKIDSWENAEDFLEKLAFRTGKLLKGGEPDLRTVGKMVLNDWQRGRIPFFVKPPNAEPPATPQLPSASTLEVAPETAQNNTEEETPESGGGGSEPGLEKKEEEPGQCGADAEMQQILARVRQNFGKINVVPQFSGDDLVPLEMSDIEEELESLSGEREEEEEQEPQEDTDEEPFTEAQEEHTGSSTKAVIQALDEKIAKYQRFLDKAKAKKFSAVRISKGLSEKVFAKPEQQKAVEEDVEDTAPTKKGKKRKAQREEEHSDKTRRMLTSKERRRAARQQQPRKVGVRYYETHNVKNRNRNKKKTSDSEGQKQRRKKFKHKQ", "length": 730, "header": "tr|A0A4X1VR06-1|A0A4X1VR06_PIG Isoform 1 of Nucleolar GTP-binding protein 2 OS=Sus scrofa OX=9823 GN=GNL2 PE=3 SV=1 CANONICAL=A0A4X1VR06-1" }, "locus": { "chromosome": "6", "start_pos": 93645827, "end_pos": 93621487, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045663.3", "url": "https://www.ensembl.org/id/ENSSSCT00000045663.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000044599.1", "url": "https://www.ensembl.org/id/ENSSSCP00000044599.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VR06", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR06" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100623150", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623150", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "F1MDN8-1", "protein_name": "Nucleolar GTP-binding protein 2", "gene_name": "GNL2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVKPKYKGRSTINPSNASTNPDRVQGAGGHNMRDRATIRRLNMYRQKERRNSRGKVIKPLQYQSTVASGTVARVEPNIKWFGNTRVIKQSSLQKFQEEMDTVLKDPYKVVMKQSKLPMSLLHDRIRPHNAKVHILDTESFETTFGPKAQRKRPNLFASDMQSLIENAETSTESYDQGKDRDLVAEDTGVRNEAQEEIFKKGQSKRIWGELYKVIDSSDVVVQVLDARDPVGTRSPHIETYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQDYPTLAFHASLTNPFGKGAFIQLLRQFGKLHTDKKQISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQYITLMRRIFLIDCPGVVYPSEDSETDIVLKGVVQVEKIKTPEDHIGAVLERAKPEYISKTYKINSWENAEDFLEKLAFRTGKLLKGGEPNLRTVGKMVLNDWQRGRIPFFVKPPNAEPPAAPELPSSSSLEVAAETTQNNPGEKVTETVGEESESILEKEKEEPRHCGIDSEMQQILARVRQNFGKINVAPQFSGDDLVPLEMSDIDDELESLSAENEEEEEQEYPGDDEDESYAESQEEHAGRTTKAVIQALDEKIAKYQRFLNKAKAKKFSAIRISKGLSEMVFAKSEGRKKGKAEEDVDDTAPPKKGKKRKAQREEEQPDKTRRTLTSKERRREARQQRSRKVGIRYYETHNVKNRNRNKKKTTDSEGQKHRHKKAKHKQ", "length": 732 }, "evidence": [ { "id": "A0A4X1VR06", "url": "https://omabrowser.org/oma/group/A0A4X1VR06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3HE17-1", "protein_name": "Nucleolar GTP-binding protein 2", "gene_name": "Gnl2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MVKPKYKGRSTINRSAASTNPDRVQGAGGQNMRDRATIRRLNMYRQKERRNNRGKVIKPLQYQSTVASGTVARVEPNIKWFGNTRVIKQASLQKFQEEMDKVMKDPYKVVMKQSKLPMSLLHDRVQPHNAKVHILDTESFESTFGPKSQRKRPNLFASDMQSLLENAEMSTESYDQGKDRDLVTEDTGVRNEAQEEIYKKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHIEAYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSRDYPTLAFHASLTNPFGKGAFIQLLRQFGKLHTDKKQISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQYITLMRRIFLIDCPGVVYPSEDSETDIVLKGVVQVEKIKAPQDHIGAVLERAKPEYISKTYKIDSWENAEDFLEKLAFRTGKLLKGGEPDLQTVGKMVLNDWQRGRIPFFVKPPNAEPPTAPQLPPSSPLEVPTEITENNPEEEISETIVEKSDSVIEKEPEADHPQDSNSEMQQILARVRQNFGKINVGPQFSADDLVPVELSDMEEDLESLSAEEEEQDQEQPGEDAEEAPSQDSQEEPVEKDTKAVIRALDEKIAKYQKFLNKAKAKKFSAIRISKDLSEKVFAKYEEEKKRSVEVSDAAPTKKGRKRSAHMEEEPSSKAQRMLTCKERRRAARQQQSKKVGVRYYETHNVKNRNRNKKKTNDSEGQKHRHKKLRQKQ", "length": 730 }, "evidence": [ { "id": "A0A4X1VR06", "url": "https://omabrowser.org/oma/group/A0A4X1VR06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q13823-1", "protein_name": "Nucleolar GTP-binding protein 2", "gene_name": "GNL2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVKPKYKGRSTINPSKASTNPDRVQGAGGQNMRDRATIRRLNMYRQKERRNSRGKIIKPLQYQSTVASGTVARVEPNIKWFGNTRVIKQSSLQKFQEEMDTVMKDPYKVVMKQSKLPMSLLHDRIRPHNLKVHILDTESFETTFGPKSQRKRPNLFASDMQSLIENAEMSTESYDQGKDRDLVTEDTGVRNEAQEEIYKKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHIETYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQDYPTLAFHASLTNPFGKGAFIQLLRQFGKLHTDKKQISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQYITLMRRIFLIDCPGVVYPSEDSETDIVLKGVVQVEKIKSPEDHIGAVLERAKPEYISKTYKIDSWENAEDFLEKLAFRTGKLLKGGEPDLQTVGKMVLNDWQRGRIPFFVKPPNAEPLVAPQLLPSSSLEVVPEAAQNNPGEEVTETAGEGSESIIKEETEENSHCDANTEMQQILTRVRQNFGKINVVPQFSGDDLVPVEVSDLEEELESFSDEEEEEQEQQRDDAEESSSEPEEENVGNDTKAVIKALDEKIAKYQKFLDKAKAKKFSAVRISKGLSEKIFAKPEEQRKTLEEDVDDRAPSKKGKKRKAQREEEQEHSNKAPRALTSKERRRAVRQQRPKKVGVRYYETHNVKNRNRNKKKTNDSEGQKHKRKKFRQKQ", "length": 731 }, "evidence": [ { "id": "A0A4X1VR06", "url": "https://omabrowser.org/oma/group/A0A4X1VR06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q99LH1-1", "protein_name": "Nucleolar GTP-binding protein 2", "gene_name": "Gnl2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVKPKYKGRSTINRSAASTNPDRVQGAGGQNMRDRGTIRRLNMYRQKERRNSRGKVIKPLQYQSTVASGTVARVEPNIKWFGNTRVIKQASLQKFQEEMDKVMKDPYKVVMKQSKLPMSLLHDRIQPHNAKVHILDTESFESTFGPKSQRKRPNLFASDMQSLLENAEMSTESYDQGKDRDLVMEDTGVRNEAQEEIYKKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHIEAYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQDYPTLAFHASLTNPFGKGAFIQLLRQFGKLHTDKKQISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQYITLMRRIFLIDCPGVVYPSEDSETDIVLKGVVQVEKIKAPQDHIGAVLERAKPEYISKTYKIESWENAEDFLEKLALRTGKLLKGGEPDMLTVSKMVLNDWQRGRIPFFVKPPNAELPTDSQLPPSSPLEVPTETTQNNPEEETTETEVERSDSITEKEPEGDCSQDRNSEMQQILARVRQNFGKINVGPQFSADDLVPVEMSDLEDLESSGEEEEQEQEQPGEDAEEERSPDTQEEPVGNDTKAVLRALDEKIAKYQRFLNKAKAKKFSAVRISKDLSEKVFAKYKEEKKTSAEDSDAAPTKKARKWDAQMEEEPSNKTQRMLTCKERRRAARQQQSKKVGVRYYETHNVKNRNRNKKKTSDSEGQKHRRNKFRQKQ", "length": 728 }, "evidence": [ { "id": "A0A4X1VR06", "url": "https://omabrowser.org/oma/group/A0A4X1VR06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "GTP binding", "id": "GO:0005525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005525", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VR06", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR06" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VR06", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR06" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 16, "end_pos": 18, "annotation": "n_glycosylation_sequon" }, { "start_pos": 488, "end_pos": 490, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1VR06", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VR06" }, { "id": "PS51721", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51721" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CP-type G", "eco_id": "ECO_0000259", "start_pos": 207, "end_pos": 368, "start_aa": "Trp", "end_aa": "Pro", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 16, "end_pos": 18 }, { "start_pos": 488, "end_pos": 490 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1VRK3-1", "uniprot_ac": "A0A4X1VRK3", "uniprot_id": "A0A4X1VRK3_PIG", "mass": { "chemical_mass": 20747.0, "monoisotopic_mass": 20747.0 }, "refseq": { "ac": "XP_020939708", "name": "tumor necrosis factor alpha-induced protein 8-like protein 1 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939708" }, "gene_names": [ { "name": "TNFAIP8L1", "type": "recommended", "evidence": [ { "id": "A0A4X1VRK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRK3" } ] }, { "name": "TNFAIP8L1", "type": "synonym", "evidence": [ { "id": "XP_020939708", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939708" } ] } ], "protein_names": [ { "name": "Tumor necrosis factor alpha-induced protein 8-like protein 1", "type": "recommended", "evidence": [ { "id": "A0A4X1VRK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRK3/entry#names_and_taxonomy" } ] }, { "name": "tumor necrosis factor alpha-induced protein 8-like protein 1 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020939708", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939708" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VRK3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRK3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TNFAIP8L1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRK3", "locus": { "chromosome": "2", "start_pos": 74203766, "end_pos": 74220816, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000034615", "url": "https://www.ensembl.org/id/ENSSSCG00000034615" } ] } } ], "crossref": [ { "id": "A0A4X1VRK3", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VRK3", "database": "AlphaFoldDB", "categories": [] }, { "id": "110259359", "url": "https://www.ncbi.nlm.nih.gov/gene/110259359", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR008477", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008477", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038355", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038355", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "QRICNGL", "url": "https://omabrowser.org/oma/group/QRICNGL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR12757", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12757", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12757:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12757:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05527", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05527", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-1483255", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1483255", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020939708", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939708", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VRK3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRK3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VRK3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRK3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDTFSTKSLALQAQKKLLSKMASRTVAAAFIDDTSSEVLDELYRATKEFTRSRKEAQKVVKNLVKVAVKLGVLLRGGQLGAEELARLQSFRQQARRLAMTAVSFHQVDFTFDRRVLAASLLECRDLLHQAAGAHLTAKSHGRINHVFGHFADCDFLAALYGPAEPYRSHLRRICEGLTRMLDEGSI", "length": 186, "header": "tr|A0A4X1VRK3-1|A0A4X1VRK3_PIG Isoform 1 of Tumor necrosis factor alpha-induced protein 8-like protein 1 OS=Sus scrofa OX=9823 GN=TNFAIP8L1 PE=3 SV=1 CANONICAL=A0A4X1VRK3-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VRK3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRK3/entry", "sequence": { "sequence": "MDTFSTKSLALQAQKKLLSKMASRTVAAAFIDDTSSEVLDELYRATKEFTRSRKEAQKVVKNLVKVAVKLGVLLRGGQLGAEELARLQSFRQQARRLAMTAVSFHQVDFTFDRRVLAASLLECRDLLHQAAGAHLTAKSHGRINHVFGHFADCDFLAALYGPAEPYRSHLRRICEGLTRMLDEGSI", "length": 186, "header": "tr|A0A4X1VRK3-1|A0A4X1VRK3_PIG Isoform 1 of Tumor necrosis factor alpha-induced protein 8-like protein 1 OS=Sus scrofa OX=9823 GN=TNFAIP8L1 PE=3 SV=1 CANONICAL=A0A4X1VRK3-1" }, "locus": { "chromosome": "2", "start_pos": 74206853, "end_pos": 74206296, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055353.2", "url": "https://www.ensembl.org/id/ENSSSCT00000055353.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049458.1", "url": "https://www.ensembl.org/id/ENSSSCP00000049458.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VRK3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRK3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-1483255", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1483255", "resource": "Reactome", "description": "PI Metabolism" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I5ZY03-1", "protein_name": "Tumor necrosis factor alpha-induced protein 8-like protein 1", "gene_name": "Tnfaip8l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDTFSTKNLVLQAQKKVLSKMASKAMVAVFVDDTSSEILDELYQATKEFTRSRKEAQRVVKNLVKVAVKLAVLLRADQLDSNALAQLRRFRSRVHSLAMTVLSFHQVDFTFDRCVLATGLLECRDLLHQATGLHLTAKSHGRINHIFSHFANGDFLAALYSPVEPYRSHLCRICDGLGRMLDEGGI", "length": 186 }, "evidence": [ { "id": "A0A4X1VRK3", "url": "https://omabrowser.org/oma/group/A0A4X1VRK3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A5PK29-1", "protein_name": "Tumor necrosis factor alpha-induced protein 8-like protein 1", "gene_name": "TNFAIP8L1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MDTFSTKSLALQAQKKLLSKMASRAVASAFIDDTSSEVLDELYRATKEFTRSRKEAQKLVKNLVKVAVKLGVLLRAGQLGAEELARLQRLRQQARRLAMTAVSFHQVDFTFDRRVLATTLLECRDLLHQAAGAHLTAKSHGRINHVFGHLADCDFLAALYSPAEPYRSHLRRICDGLTRMLDEDSI", "length": 186 }, "evidence": [ { "id": "A0A4X1VRK3", "url": "https://omabrowser.org/oma/group/A0A4X1VRK3/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F1NZ26-1", "protein_name": "Tumor necrosis factor alpha-induced protein 8-like protein 1", "gene_name": "TNFAIP8L1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MDTFSTKNLALQAQKKLLSKMASKTVANVFIDDTSSEILDELYRATKEYTHNRKEAQKIIKNLIKIVMKLGVLYRNGQFSPEELLVMERFRKKVHTLAMTAVSFHQIDFTFDRRVMSSVLTECRDLLHQAVSSHLTAKSHSRINHVFNHFADYEFLSALYGPAEPYRTHLKRICEGVNKMLEEDNI", "length": 186 }, "evidence": [ { "id": "A0A4X1VRK3", "url": "https://omabrowser.org/oma/group/A0A4X1VRK3/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3HCG7-1", 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{ "id": "A0A4X1VRK3", "url": "https://omabrowser.org/oma/group/A0A4X1VRK3/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8K288-1", "protein_name": "Tumor necrosis factor alpha-induced protein 8-like protein 1", "gene_name": "Tnfaip8l1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTFSTKSLALQAQKKVLSKMASKAMVAVFVDNTSSEVLDELYQATKEFTRSRKEAQRVVKNLVKVAVKLAVLLRADQLDSNELAQLQRFRGRVRSLAMTALSFHQVDFTFDRRVLATGLLECRDLLHQAIGPHLTAKSHGRINHIFSHFANGDFLAALYSPAEPYRSHLCRICDGLGRMLDEGGI", "length": 186 }, "evidence": [ { "id": "A0A4X1VRK3", "url": "https://omabrowser.org/oma/group/A0A4X1VRK3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8WVP5-1", "protein_name": "Tumor necrosis factor alpha-induced protein 8-like protein 1", "gene_name": "TNFAIP8L1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDTFSTKSLALQAQKKLLSKMASKAVVAVLVDDTSSEVLDELYRATREFTRSRKEAQKMLKNLVKVALKLGLLLRGDQLGGEELALLRRFRHRARCLAMTAVSFHQVDFTFDRRVLAAGLLECRDLLHQAVGPHLTAKSHGRINHVFGHLADCDFLAALYGPAEPYRSHLRRICEGLGRMLDEGSL", "length": 186 }, "evidence": [ { "id": "A0A4X1VRK3", "url": "https://omabrowser.org/oma/group/A0A4X1VRK3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VRK3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRK3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VRK3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRK3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "negative regulation of TOR signaling", "id": "GO:0032007", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032007", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VRK3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRK3" } ], "pmid": "" }, { "name": "regulation of apoptotic process", "id": "GO:0042981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042981", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VRK3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRK3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": 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{ "name": "Ubiquitin-fold modifier-conjugating enzyme 1", "type": "recommended", "evidence": [ { "id": "A0A4X1VSC7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSC7/entry#names_and_taxonomy" } ] }, { "name": "ubiquitin-fold modifier-conjugating enzyme 1", "type": "synonym", "evidence": [ { "id": "XP_003125702", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125702" } ] } ], "function": [ { "annotation": "E2-like enzyme which specifically catalyzes the second step in ufmylation. Accepts the ubiquitin-like modifier UFM1 from the E1 enzyme UBA5 and forms an intermediate with UFM1 via a thioester linkage. Ufmylation is involved in various processes, such as ribosome recycling, response to DNA damage, interferon response or reticulophagy (also called ER-phagy).", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSC7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSC7#function" }, { "database": "UniProtKB", "id": "PIRNR008716", "url": "https://www.uniprot.org/uniprotkb/PIRNR008716#function" }, { "database": "UniProtKB", "id": "ARBA00045718", "url": "https://www.uniprot.org/uniprotkb/ARBA00045718#function" }, { "database": "UniProtKB", "id": "A0A4X1VRN9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRN9#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSC7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSC7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "UFC1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSC7", "locus": { "chromosome": "4", "start_pos": 89296282, "end_pos": 89302941, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000006363", "url": "https://www.ensembl.org/id/ENSSSCG00000006363" } ] } } ], "crossref": [ { "id": "A0A4X1VSC7", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VSC7", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd11686", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd11686", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100157692", "url": "https://www.ncbi.nlm.nih.gov/gene/100157692", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR014806", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014806", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016135", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016135", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100157692", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157692", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LWQKNVP", "url": "https://omabrowser.org/oma/group/LWQKNVP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VSC7", "url": "https://www.orthodb.org/?gene=A0A4X1VSC7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12921", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12921", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12921:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12921:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF08694", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08694", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003125702", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125702", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VRN9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRN9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VRN9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRN9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VSC7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSC7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VSC7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSC7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MADEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMALGLGPWLAVEIPDLIQKGVIQHKEKCNQ", "length": 167, "header": "tr|A0A4X1VSC7-1|A0A4X1VSC7_PIG Isoform 1 of Ubiquitin-fold modifier-conjugating enzyme 1 OS=Sus scrofa OX=9823 GN=UFC1 PE=1 SV=1 CANONICAL=A0A4X1VSC7-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VRN9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRN9/entry", "sequence": { "sequence": "MADEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRVIGLRRFVLCYRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMALGLGPWLAVEIPDLIQKGVIQHKEKCNQ", "length": 156, "header": "tr|A0A4X1VRN9-1|A0A4X1VSC7_PIG Computationally mapped isoform of Ubiquitin-fold modifier-conjugating enzyme 1 OS=Sus scrofa OX=9823 GN=UFC1 PE=1 SV=1 CANONICAL=A0A4X1VSC7-1" }, "locus": { "chromosome": "4", "start_pos": 89301383, "end_pos": 89296642, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062530.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062530.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049992.2", "url": "https://www.ensembl.org/id/ENSSSCP00000049992.2" } ] } }, { "isoform_ac": "A0A4X1VSC7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSC7/entry", "sequence": { "sequence": "MADEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMALGLGPWLAVEIPDLIQKGVIQHKEKCNQ", "length": 167, "header": "tr|A0A4X1VSC7-1|A0A4X1VSC7_PIG Isoform 1 of Ubiquitin-fold modifier-conjugating enzyme 1 OS=Sus scrofa OX=9823 GN=UFC1 PE=1 SV=1 CANONICAL=A0A4X1VSC7-1" }, "locus": { "chromosome": "4", "start_pos": 89301383, "end_pos": 89296642, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000006972.4", "url": "https://www.ensembl.org/id/ENSSSCT00000006972.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000006782.2", "url": "https://www.ensembl.org/id/ENSSSCP00000006782.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VRN9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRN9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100157692", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157692", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "G3HU13-1", "protein_name": "Ubiquitin-fold modifier-conjugating enzyme 1", "gene_name": "Ufc1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MADEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNSDNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFEIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMALGLGPWLAVEIPDLIQKGVIQHKEKCNQ", "length": 167 }, "evidence": [ { "id": "A0A4X1VSC7", "url": "https://omabrowser.org/oma/group/A0A4X1VSC7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q1ZXC9-1", "protein_name": "Ubiquitin-fold modifier-conjugating enzyme 1", "gene_name": "ufc1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDNHTKQTVQQIPLLTVKAGPRDGDKWIDRLKEEYQALIKYVEINKKADNDWFNIESNPLGTRWQGKCWYIYNFKKYEFDLEFDMPVTYPETAPEIAIPELDGKTEKMYRGGKICLTIHFKPLWSRNVPHFGIAHALALGLAPWLAAEVPHLVDNGIIKHKEDK", "length": 164 }, "evidence": [ { "id": "A0A4X1VSC7", "url": "https://omabrowser.org/oma/group/A0A4X1VSC7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q5E953-1", "protein_name": "Ubiquitin-fold modifier-conjugating enzyme 1", "gene_name": "UFC1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MADEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMALGLGPWLAVEIPDLIQKGVIQHKEKCSQ", "length": 167 }, "evidence": [ { "id": "A0A4X1VSC7", "url": "https://omabrowser.org/oma/group/A0A4X1VSC7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q6BBI8-1", "protein_name": "Ubiquitin-fold modifier-conjugating enzyme 1", "gene_name": "Ufc1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADNDWFRLESNKEGTRWFGKCWYIHDFLKYEFDIEFEIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMALGLGPWLAVEVPDLIQKGVIQHKEKCNQ", "length": 167 }, "evidence": [ { "id": "A0A4X1VSC7", "url": "https://omabrowser.org/oma/group/A0A4X1VSC7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6DEN0-1", "protein_name": "Ubiquitin-fold modifier-conjugating enzyme 1", "gene_name": "ufc1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MADEATRKAVSEIPLLKTNSGPRDKELWVQRLREEYLALIKYVENNKAADNDWFRLESNKEGTRWFGKCWYIHELLKYEFDMEFDIPVTYPATAPEVAIPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMALGLGPWLAVEIPDLIAKGLIQHKDQNS", "length": 166 }, "evidence": [ { "id": "A0A4X1VSC7", "url": "https://omabrowser.org/oma/group/A0A4X1VSC7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q7K1Z5-1", "protein_name": "Ubiquitin-fold modifier-conjugating enzyme 1", "gene_name": "Ufc1", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MVDDSTRKTLSNIPLLQIRAGPREKDVWVQRLKEEYQALIKYVENNKQSGSDWFRLESNKEGTKWFGKCWYMHNLLKYEFDVEFDIPVTYPTTAPEIALPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGIAHAMALGLAPWLAVEIPDLIEKGIITYKEK", "length": 164 }, "evidence": [ { "id": "A0A4X1VSC7", "url": "https://omabrowser.org/oma/group/A0A4X1VSC7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9CR09-1", "protein_name": "Ubiquitin-fold modifier-conjugating enzyme 1", "gene_name": "Ufc1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNSDNDWFRLESNKEGTRWFGKCWYIHDFLKYEFDIEFEIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMALGLGPWLAVEVPDLIQKGVIQHKEKCSQ", "length": 167 }, "evidence": [ { "id": "A0A4X1VSC7", "url": "https://omabrowser.org/oma/group/A0A4X1VSC7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9SXC8-1", "protein_name": "Ubiquitin-fold modifier-conjugating enzyme 1", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEGWDPNTKSTLTRIPLLTTKAGPRDGAAWTQRLKEEYKSLIAYTQMNKSNDNDWFRISASNPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYPATAPELELPEIDGKTQKMYRGGKICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEIPILVDSGAIKHKDDAATSAES", "length": 174 }, "evidence": [ { "id": "A0A4X1VSC7", "url": "https://omabrowser.org/oma/group/A0A4X1VSC7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9Y3C8-1", "protein_name": "Ubiquitin-fold modifier-conjugating enzyme 1", "gene_name": "UFC1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MADEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMALGLGPWLAVEIPDLIQKGVIQHKEKCNQ", "length": 167 }, "evidence": [ { "id": "A0A4X1VSC7", "url": "https://omabrowser.org/oma/group/A0A4X1VSC7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "protein ufmylation", "id": "GO:0071569", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071569", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSC7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSC7" } ], "pmid": "" }, { "name": "brain development", "id": "GO:0007420", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007420", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSC7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSC7" } ], "pmid": "" }, { "name": "response to endoplasmic reticulum stress", "id": "GO:0034976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034976", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSC7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSC7" } ], "pmid": "" }, { "name": "reticulophagy", "id": "GO:0061709", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061709", "evidence": [ { "database": 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"synonym", "evidence": [ { "id": "NP_001231028", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231028" } ] }, { "name": "CDIP1", "type": "synonym", "evidence": [ { "id": "NP_001231028", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231028" } ] } ], "protein_names": [ { "name": "Cell death-inducing p53-target protein 1", "type": "recommended", "evidence": [ { "id": "A0A4X1VRS3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRS3/entry#names_and_taxonomy" } ] }, { "name": "LITAF-like protein", "type": "synonym", "evidence": [ { "id": "A0A4X1VRS3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRS3/entry#names_and_taxonomy" } ] }, { "name": "cell death-inducing p53-target protein 1", "type": "synonym", "evidence": [ { "id": "NP_001231028", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231028" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VRS3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRS3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CDIP1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRS3", "locus": { "chromosome": "3", "start_pos": 37839009, "end_pos": 37815710, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000007941", "url": "https://www.ensembl.org/id/ENSSSCG00000007941" } ] } } ], "crossref": [ { "id": "A0A4X1VRS3", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VRS3", "database": "AlphaFoldDB", "categories": [] }, { "id": "100512098", "url": "https://www.ncbi.nlm.nih.gov/gene/100512098", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006629", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006629", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037519", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037519", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100512098", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512098", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR23292", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23292", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23292:SF7", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23292:SF7", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF10601", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10601", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001231028", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231028", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VRS3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRS3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VRS3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRS3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSNEPPPPYPGGPTAPLLEEKSGAPPTPGRTSPAVMQPPPGMSMPPADIGPPPYEPPGYPVPQPGFIPPHVNAEGTYMPPGFYPPPGPHPPMGYYPPGPYPPGPYPGPGGHTATVLVPSGAATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYIYTYKRLC", "length": 208, "header": "tr|A0A4X1VRS3-1|A0A4X1VRS3_PIG Isoform 1 of Cell death-inducing p53-target protein 1 OS=Sus scrofa OX=9823 GN=CDIP1 PE=3 SV=1 CANONICAL=A0A4X1VRS3-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VRS3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VRS3/entry", "sequence": { "sequence": "MSNEPPPPYPGGPTAPLLEEKSGAPPTPGRTSPAVMQPPPGMSMPPADIGPPPYEPPGYPVPQPGFIPPHVNAEGTYMPPGFYPPPGPHPPMGYYPPGPYPPGPYPGPGGHTATVLVPSGAATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYIYTYKRLC", "length": 208, "header": "tr|A0A4X1VRS3-1|A0A4X1VRS3_PIG Isoform 1 of Cell death-inducing p53-target protein 1 OS=Sus scrofa OX=9823 GN=CDIP1 PE=3 SV=1 CANONICAL=A0A4X1VRS3-1" }, "locus": { "chromosome": "3", "start_pos": 37838005, "end_pos": 37836651, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064617.3", "url": "https://www.ensembl.org/id/ENSSSCT00000064617.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000048356.1", "url": "https://www.ensembl.org/id/ENSSSCP00000048356.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true 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"yes" } }, { "uniprot_canonical_ac": "A0A4X1VS71-1", "uniprot_ac": "A0A4X1VS71", "uniprot_id": "A0A4X1VS71_PIG", "mass": { "chemical_mass": 39469.0, "monoisotopic_mass": 39469.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "Magnesium transporter protein 1", "type": "recommended", "evidence": [ { "id": "A0A4X1VS71", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VS71/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VS71", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VS71" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VS71", "locus": {} } ], "crossref": [ { "id": "A0A4X1VS71", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VS71", "database": "AlphaFoldDB", "categories": [] }, { "id": "IPR021149", "url": "https://www.ebi.ac.uk/interpro/entry/IPR021149", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036249", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036249", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "KVPDYPY", "url": "https://omabrowser.org/oma/group/KVPDYPY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR12692", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12692", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12692:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12692:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04756", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04756", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A4X1VS71", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VS71", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VS71-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VS71-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAEWSWLWRVSLMVVVALVVITPKTPAHRGQEKKILAEKVRQLTYWTKKNRVIRMNDIMFNHFVLETPRNYSVIVMLTALQKFRACLTCEHAAEEFQILADSWQGSRAFSNKVFFALVDFDESPDIFQMLQLMSVPNVLHFSAKRKFTPDDIYHLAERGITAQQMSKWVAERTKRRVVNTRTRQPTDYYYPFKLGISLALIGGLVYVLKWKRKFIFNTHLWAVLALGFVIPMISGHMWTHITEAPFAQSDTHTGRTYYIHEVSYFQLAAEMYIVSLFHVCMTLGMVLLDTAATSRMMVMKRKIISVSSICLFVIFFSWLLSLFRFKEPNYPFRILMD", "length": 337, "header": "tr|A0A4X1VS71-1|A0A4X1VS71_PIG Isoform 1 of Magnesium transporter protein 1 OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A4X1VS71-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VS71-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VS71/entry", "sequence": { "sequence": "MAEWSWLWRVSLMVVVALVVITPKTPAHRGQEKKILAEKVRQLTYWTKKNRVIRMNDIMFNHFVLETPRNYSVIVMLTALQKFRACLTCEHAAEEFQILADSWQGSRAFSNKVFFALVDFDESPDIFQMLQLMSVPNVLHFSAKRKFTPDDIYHLAERGITAQQMSKWVAERTKRRVVNTRTRQPTDYYYPFKLGISLALIGGLVYVLKWKRKFIFNTHLWAVLALGFVIPMISGHMWTHITEAPFAQSDTHTGRTYYIHEVSYFQLAAEMYIVSLFHVCMTLGMVLLDTAATSRMMVMKRKIISVSSICLFVIFFSWLLSLFRFKEPNYPFRILMD", "length": 337, "header": "tr|A0A4X1VS71-1|A0A4X1VS71_PIG Isoform 1 of Magnesium transporter protein 1 OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A4X1VS71-1" }, "locus": { "chromosome": "6", "start_pos": 92232005, "end_pos": 92230995, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004028.3", "url": "https://www.ensembl.org/id/ENSSSCT00000004028.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000003937.1", "url": "https://www.ensembl.org/id/ENSSSCP00000003937.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VS71", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VS71" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1M271-1", "protein_name": "Magnesium transporter protein 1", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "GGWRGARKGMMRLGQKVLEEKVRQLMDWTKRDRVMRMNTAAFNHFVLEKPRNYSVIAMFTALQRFRSCAPCKLAVEEFQVLAGSWQFSSAFSNKVFFAMLDFDESPEVFKTLQVKGGPVVLHLPAKSEFTADDIYNFQVRDISAQHMFTWVDDRTGRWMGNFTTRQPIHFHYPFKLGISVALIGGLVYVLKWKRTFIFSKNFWAVLALCFVILMSSGRMWIHIRGAPFAESKTHTGQTHYIQDTYFFQYVAEMYIISLFYMCITLGMVLLSTAATSRMNIIRRKIMSVTGMCLLVIFFSWLLSLVRLKYHVYPFRILMN", "length": 319 }, "evidence": [ { "id": "A0A4X1VS71", "url": "https://omabrowser.org/oma/group/A0A4X1VS71/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q54N33-1", "protein_name": "Probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3", "gene_name": "ost3", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": 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"authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1VSF3-1", "uniprot_ac": "A0A4X1VSF3", "uniprot_id": "A0A4X1VSF3_PIG", "mass": { "chemical_mass": 38391.0, "monoisotopic_mass": 38391.0 }, "refseq": {}, "gene_names": [ { "name": "DGAT2L6", "type": "recommended", "evidence": [ { "id": "A0A4X1VSF3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSF3" } ] } ], "protein_names": [ { "name": "Acyltransferase", "type": "recommended", "evidence": [ { "id": "A0A4X1VSF3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSF3/entry#names_and_taxonomy" } ] }, { "name": "2.3.1.-", "type": "synonym", "evidence": [ { "id": "A0A4X1VSF3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSF3/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSF3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSF3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DGAT2L6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSF3", "locus": { "chromosome": "X", "start_pos": 56239196, "end_pos": 56216066, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000012381", "url": "https://www.ensembl.org/id/ENSSSCG00000012381" } ] } } ], "crossref": [ { "id": "A0A4X1VSF3", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VSF3", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd07987", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07987", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR007130", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007130", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "GTWIRFF", "url": "https://omabrowser.org/oma/group/GTWIRFF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR12317", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12317", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12317:SF19", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12317:SF19", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03982", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03982", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-1482883", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1482883", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1VSF3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSF3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VSF3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSF3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTFISQLDLQEILQTFSVLQWVPCFAILGTIPIILIPYFLVFTKFWLVSVFALAWLFYDWNTPSQGGRRSDWIRNWTLWKYFRNYFPVKLVKTHDLSPKRNYIIANHPHGIVSYGIFVNFATEATGFAQLFPDITPYVGTLEVTFWIPILREYVMSMGVCPVSELSLKYLLTQRGSGNAVVVVVGGAAEALLCRPGASTILLKPRKGFVRLALETGSYLVPSYSFGENEVLNQESFAEGSWKSFFLKILQKALKKFMGLTFCIFHGRGLTKGSWGFLPFNRPITTVVGEPLPIPKIEKPTKETVDKYHALYISALRKLFDQHKTQYGLSETQELTII", "length": 337, "header": "tr|A0A4X1VSF3-1|A0A4X1VSF3_PIG Isoform 1 of Acyltransferase OS=Sus scrofa OX=9823 GN=DGAT2L6 PE=3 SV=1 CANONICAL=A0A4X1VSF3-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VSF3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSF3/entry", "sequence": { "sequence": "MTFISQLDLQEILQTFSVLQWVPCFAILGTIPIILIPYFLVFTKFWLVSVFALAWLFYDWNTPSQGGRRSDWIRNWTLWKYFRNYFPVKLVKTHDLSPKRNYIIANHPHGIVSYGIFVNFATEATGFAQLFPDITPYVGTLEVTFWIPILREYVMSMGVCPVSELSLKYLLTQRGSGNAVVVVVGGAAEALLCRPGASTILLKPRKGFVRLALETGSYLVPSYSFGENEVLNQESFAEGSWKSFFLKILQKALKKFMGLTFCIFHGRGLTKGSWGFLPFNRPITTVVGEPLPIPKIEKPTKETVDKYHALYISALRKLFDQHKTQYGLSETQELTII", "length": 337, "header": "tr|A0A4X1VSF3-1|A0A4X1VSF3_PIG Isoform 1 of Acyltransferase OS=Sus scrofa OX=9823 GN=DGAT2L6 PE=3 SV=1 CANONICAL=A0A4X1VSF3-1" }, "locus": { "chromosome": "X", "start_pos": 56239143, "end_pos": 56216166, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040022.2", "url": "https://www.ensembl.org/id/ENSSSCT00000040022.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055783.1", "url": "https://www.ensembl.org/id/ENSSSCP00000055783.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSF3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSF3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-1482883", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1482883", "resource": "Reactome", "description": "Acyl chain remodeling of DAG and TAG" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7GJN5-1", "protein_name": "Acyltransferase", "gene_name": "Dgat2l6", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDEISYRARSSVLSPPPVVARLPLATDLQEGLRTLSVLQWIPVYVILGAIPILGIPYCLLFSSLWPLSVLPLIWLAYDWNTHSQDGRRSAWIRNWTLWKYFQSYFPVKLVKTHDLSPKHNYIIVSHPHGILAHGAFINFATEATGFSRIFPSITPCLATLEGIFWIPIVRDYVMSMGICPVSELALKYKLTQKGSGNAVIIVVGGASEALLCRPGASTVYLKNHKGFVKLALKTGAYLVPSYSFGENNIFNQETFPEGTWLRFFQKNFQKIGKKILGLNFCTFHGRGLTRTSWGFLPFNHPITTVVGEPLPVPKICDPDKETVAKYFEIYISALRKLFDQHKTKYGFSETQELTIV", "length": 356 }, "evidence": [ { "id": "A0A4X1VSF3", "url": "https://omabrowser.org/oma/group/A0A4X1VSF3/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A2ADU8-1", "protein_name": "Diacylglycerol O-acyltransferase 2-like protein 6", "gene_name": "Dgat2l6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAFSCLDLQEGLRTLSILQWIPVYVLLGTLSILGMPYLLLFTTLWPLSVLFLVWIAYDWNTHIQDGRRSAWVRNWTLWKYFQSYFPVKLVKTHDLSPKHNYIILSHPHGILSYGAFINFATESTGFSRVFPSITPFLATLEGIFWIPFVRDYLMSLGICPVSKLSLTHKLTQKDSGNAVIIVPGGASESLLSRPGVSMIYLKKRQGFVKLALKTGAYLVPSYSFGENETYNQETFAEGTWLRFFQKNIQKIGKRILGINLCTIHGRGLTRGSWGFLPFNHPITTVVGEPLPVPKIPDPDKETVEKYLELYISALRKLFDQHKAEYGLSKTHELKIL", "length": 337 }, "evidence": [ { "id": "A0A4X1VSF3", "url": "https://omabrowser.org/oma/group/A0A4X1VSF3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A6QP72-1", "protein_name": "Diacylglycerol O-acyltransferase 2-like protein 6", "gene_name": "DGAT2L6", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAFLSQLNLQEILQTLSVLQWMPVYVFLGAIPIIVIPYFLVFTKFWMVSVLALAWLAYDWNTHSQGGRRSAWVRNWTIWKYFQNYFPIKLVKTHDLSPRHNYIIASHPHGVLPYGTFINFATETTGFARIFPGITPYVATLEGIFWIPIVREYVMSMGVCPVSELALKYLLTQKGSGNAVVIMVGGGAEALLCHPGATTVLLKQRKGFVKVALETGAYLVPSYSFGQNEVHNQETFPEGTWKRFFQKALQDTLKKLLRLSVCTFHGRGLTRGSWGFLPFNHPITTVVGEPLPIPRIKKPNEETVDKYHALYINALQKLFDEHKVQYGLSETQELTII", "length": 337 }, "evidence": [ { "id": "A0A4X1VSF3", "url": "https://omabrowser.org/oma/group/A0A4X1VSF3/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "D3ZTG7-1", "protein_name": "Acyltransferase", "gene_name": "Dgat2l6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAFFSRLDLHEGLRTLSVLQWIPVYVILGTLSILGIPYFLLFSTFWPLSVLFLAWVAYDWNTHSQDGRRSAWVRNWTLWKYFQSYFPVKLVKTHDLSPKHNYIILSHPHGILCYGAFINFATEATGFSRVFPSITPFLATLEGIFWIPFVRDYVMSMGICPVSELALKHQLTQRGSGNAVIIVPGGASEALLCCPGVSTVYLKKRKGFVKLALKTGAYLVPSYSFGENEAYNQETFPEGTWLRFFQKNFQKIGKRILGINFCTFHGRGLTRGSWGFLPFNHPITTVVGEPLPVPKILDPDKETVAKYFELYISALRKLFDQHKTKYDFSKTQELTII", "length": 337 }, "evidence": [ { "id": "A0A4X1VSF3", "url": "https://omabrowser.org/oma/group/A0A4X1VSF3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6ZPD8-1", "protein_name": "Diacylglycerol O-acyltransferase 2-like protein 6", "gene_name": "DGAT2L6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAFFSRLNLQEGLQTFFVLQWIPVYIFLGAIPILLIPYFLLFSKFWPLAVLSLAWLTYDWNTHSQGGRRSAWVRNWTLWKYFRNYFPVKLVKTHDLSPKHNYIIANHPHGILSFGVFINFATEATGIARIFPSITPFVGTLERIFWIPIVREYVMSMGVCPVSSSALKYLLTQKGSGNAVVIVVGGAAEALLCRPGASTLFLKQRKGFVKMALQTGAYLVPSYSFGENEVFNQETFPEGTWLRLFQKTFQDTFKKILGLNFCTFHGRGFTRGSWGFLPFNRPITTVVGEPLPIPRIKRPNQKTVDKYHALYISALRKLFDQHKVEYGLPETQELTIT", "length": 337 }, "evidence": [ { "id": "A0A4X1VSF3", "url": "https://omabrowser.org/oma/group/A0A4X1VSF3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "lipid metabolic process", "id": "GO:0006629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006629", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSF3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSF3" } ], "pmid": "" }, { "name": "monoacylglycerol biosynthetic process", "id": "GO:0006640", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006640", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSF3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSF3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSF3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSF3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "O-acyltransferase activity", "id": "GO:0008374", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008374", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSF3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSF3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 75, "end_pos": 77, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-8848580", "name": "DGAT2L6,L7P transfer acyl group from acyl-CoA to DAG, forming TAG", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, endoplasmic reticulum membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-8848580", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8848580" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 75, "end_pos": 77 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1VSG6-1", "uniprot_ac": "A0A4X1VSG6", "uniprot_id": "A0A4X1VSG6_PIG", "mass": { "chemical_mass": 8430.0, "monoisotopic_mass": 8430.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "Beta-defensin", "type": "recommended", "evidence": [ { "id": "A0A4X1VSG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSG6/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Has antibacterial activity.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSG6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSG6#function" }, { "database": "UniProtKB", "id": "RU231113", "url": "https://www.uniprot.org/uniprotkb/RU231113#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSG6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSG6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSG6", "locus": {} } ], "crossref": [ { "id": "A0A4X1VSG6", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VSG6", "database": "AlphaFoldDB", "categories": [] }, { "id": "IPR025933", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025933", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PF13841", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13841", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A4X1VSG6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSG6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VSG6-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSG6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRIPVLLLTTFLMLFQAVRNDLDADRICGYGTSRCRRYCKRQEIRIGRCPNTYPCCLKKWRDSSLNPMKDK", "length": 71, "header": "tr|A0A4X1VSG6-1|A0A4X1VSG6_PIG Isoform 1 of Beta-defensin OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A4X1VSG6-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VSG6-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSG6/entry", "sequence": { "sequence": "MRIPVLLLTTFLMLFQAVRNDLDADRICGYGTSRCRRYCKRQEIRIGRCPNTYPCCLKKWRDSSLNPMKDK", "length": 71, "header": "tr|A0A4X1VSG6-1|A0A4X1VSG6_PIG Isoform 1 of Beta-defensin OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A4X1VSG6-1" }, "locus": { "chromosome": "15", "start_pos": 38005703, "end_pos": 38000421, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047124.2", "url": "https://www.ensembl.org/id/ENSSSCT00000047124.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000044027.2", "url": "https://www.ensembl.org/id/ENSSSCP00000044027.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSG6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSG6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSG6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSG6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "innate immune response", "id": "GO:0045087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045087", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSG6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSG6" } ], "pmid": "" }, { "name": "defense response to bacterium", "id": "GO:0042742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042742", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSG6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSG6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { 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"header": "tr|A0A4X1VSV5-1|A0A4X1VSV5_PIG Isoform 1 of Heme oxygenase 1 OS=Sus scrofa OX=9823 GN=HMOX2 PE=1 SV=1 CANONICAL=A0A4X1VSV5-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VSV5-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSV5/entry", "sequence": { "sequence": "MSVELETSEGVDEPEEKSSGAPEKENHTRMADLSELLKEGTKEAHDRAESTQFVKDFLKGNIRKELFKLATTALYFTYSALEEEMDRNKDHPAFAPLYFPTELHRKEALVKDMEYFYGGDWEEQAQCSEATRKYVERIHYVGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPSTGEGTQFYLFENVDNAQQFKQFYRARMNALDLNLETKEKIVEEANKAFEYNMQVFNELDQAGSLLAKETLADGLPVHDGKGDVRKCPYYSGEQDKGALEGSSCPFQTALAVLSKPSLQFLLAASVALAASLLAWYYM", "length": 316, "header": "tr|A0A4X1VSV5-1|A0A4X1VSV5_PIG Isoform 1 of Heme oxygenase 1 OS=Sus scrofa OX=9823 GN=HMOX2 PE=1 SV=1 CANONICAL=A0A4X1VSV5-1" }, "locus": { "chromosome": "3", "start_pos": 37844413, "end_pos": 37840990, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052512.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052512.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050270.1", "url": "https://www.ensembl.org/id/ENSSSCP00000050270.1" } ] } }, { "isoform_ac": "A0A5G2RDC3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RDC3/entry", "sequence": { "sequence": "MSVELETSEGVDEPEEKSSGAPEKENHTRMADLSELLKEGTKEAHDRAESTQFVKDFLKGNIRKELFKLATTALYFTYSALEEEMDRNKDHPAFAPLYFPTELHRKEALVKDMEYFYGGDWEEQAQCSEATRKYVERIHYVGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPSTGEGTQFYLFENVDNAQQFKQFYRARMNALDLNLETKEKIVEEANKAFEYNMQVLPGPRAAQTGLSALGHMSAACPRSSPGSASTRGHERVWGQRGPSTWRRWGGGSCPLPVLVMRSGVPPS", "length": 301, "header": "tr|A0A5G2RDC3-1|A0A4X1VSV5_PIG Computationally mapped isoform of Heme oxygenase 1 OS=Sus scrofa OX=9823 GN=HMOX2 PE=1 SV=1 CANONICAL=A0A4X1VSV5-1" }, "locus": { "chromosome": "3", "start_pos": 37844413, "end_pos": 37841870, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082533.1", "url": "https://www.ensembl.org/id/ENSSSCT00000082533.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074487.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074487.1" } ] } }, { "isoform_ac": "A0A8D0R6D2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0R6D2/entry", "sequence": { "sequence": "MMADLSELLKEGTKEAHDRAESTQFVKDFLKGNIRKELFKLATTALYFTYSALEEEMDRNKDHPAFAPLYFPTELHRKEALVKDMEYFYGGDWEEQAQCSEATRKYVERIHYVGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPSTGEGTQFYLFENVDNAQQFKQFYRARMNALDLNLETKEKIVEEANKAFEYNMQVFNELDQAGSLLAKETLADGLPVHDGKGDVRKCPYYSGEQDKGALEGSSCPFQTALAVLSKPSLQFLLAASVALAASLLAWYYM", "length": 288, "header": "tr|A0A8D0R6D2-1|A0A4X1VSV5_PIG Computationally mapped isoform of Heme oxygenase 1 OS=Sus scrofa OX=9823 GN=HMOX2 PE=1 SV=1 CANONICAL=A0A4X1VSV5-1" }, "locus": { "chromosome": "3", "start_pos": 37843471, "end_pos": 37840990, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087079.2", "url": "https://www.ensembl.org/id/ENSSSCT00000087079.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074247.2", "url": "https://www.ensembl.org/id/ENSSSCP00000074247.2" } ] } }, { "isoform_ac": "F1RK58-1", "url": "https://www.uniprot.org/uniprotkb/F1RK58/entry", "sequence": { "sequence": "MSVELETSEGVDEPEEKSSGAPEKENHTRMADLSELLKEGTKEAHDRAESTQFVKDFLKGNIRKELFKLATTALYFTYSALEEEMDRNKDHPAFAPLYFPTELHRKEALVKDMEYFYGGDWEEQAQCSEATRKYVERIHYVGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPSTGEGTQFYLFENVDNAQQFKQFYRARMNALDLNLETKEKIVEEANKAFEYNMQVFNELDQAGSLLAKETLADGLPVHDGKGDVRKCPYYSGEQDKGGKTSFQVYKLYARLLRVAA", "length": 294, "header": "tr|F1RK58-1|A0A4X1VSV5_PIG Computationally mapped isoform of Heme oxygenase 1 OS=Sus scrofa OX=9823 GN=HMOX2 PE=1 SV=2 CANONICAL=A0A4X1VSV5-1" }, "locus": { "chromosome": "3", "start_pos": 37844413, "end_pos": 37834095, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008704.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008704.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008480.3", "url": "https://www.ensembl.org/id/ENSSSCP00000008480.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "HO-2 provides endogenous protection against oxidative stress and apoptosis caused by TNF-alpha in cerebral vascular endothelial cells.", "journal": "American journal of physiology. Cell physiology", "date": "2006-11", "authors": "Basuroy Shyamali, Bhattacharya Sujoy, Tcheranova Dilyara, Qu Yan, Regan Raymond F, Leffler Charles W, Parfenova Helena", "evidence": [ { "database": "RefSeq", "id": "NP_001231341", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231341" } ], "reference": [ { "type": "PubMed", "id": "16822952", "url": "https://glygen.org/publication/PubMed/16822952" } ] }, { "title": "Heme-oxygenase-2 immunolabelling in pig jejunum.", "journal": "Acta histochemica", "date": "2010-07", "authors": "Matsuda Nilce Mitiko, Miller Steven M, Szurszewski Joseph H", "evidence": [ { "database": "RefSeq", "id": "NP_001231341", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231341" } ], "reference": [ { "type": "PubMed", "id": "19232687", "url": "https://glygen.org/publication/PubMed/19232687" } ] }, { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D0R6D2", "url": "https://www.uniprot.org/uniprotkb/A0A8D0R6D2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:396622", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:396622", "resource": "KEGG Pathway" }, { "id": "R-SSC-189483", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-189483", "resource": "Reactome", "description": "Heme degradation" }, { "id": "R-SSC-6798695", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798695", "resource": "Reactome", "description": "Neutrophil degranulation" }, { "id": "R-SSC-8980692", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8980692", "resource": "Reactome", "description": "RHOA GTPase cycle" }, { "id": "R-SSC-917937", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-917937", "resource": "Reactome", "description": "Iron uptake and transport" }, { "id": "R-SSC-9707564", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9707564", "resource": "Reactome", "description": "Cytoprotection by HMOX1" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YXK7-1", "protein_name": "Heme oxygenase", "gene_name": "HMOX2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPSVMESSEGGDEGESLRYEELEDDSVSPTDLSELLKEGTKESHDRAENTQFVKDFLKGQIKKELFKLATTALYFTYTALEEEMDRNKDNPVFAPLYFPLELHRKEALIKDMKYFYGEDWKEKIQCSDATQQYVDRIHHVGQHEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPSTEEGIQFYTFENISNAQKFKQLYRARLNALDLDKNCKERIVEEANRAFRFNMEVFDELDKIGRSLAEEAQDGGVPVHDGKGDVRKCPYYADKLAGNAAAGCPYHTAVALAKQPIVQLILAACVAVAAGAAAWYVM", "length": 313 }, "evidence": [ { "id": "A0A4X1VSV5", "url": "https://omabrowser.org/oma/group/A0A4X1VSV5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0ABI0P094-1", "protein_name": "Heme oxygenase 1", "gene_name": "HMOX2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSAELETSEGLDEPEKKISGVPEKENHTRMADLSELLKEGTKESHDRAENTQFVKDFLKGNIRKELFKLATTALYFTYSALEEEIDRNKDHPAFAPLYFPTELHRKKALIRDMEYLYGEHWEEQAQCSEATRKYVERIHEVGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPSTGEGTQFYLFENVDNAQQFKQLYRARMNALDLNLETKEKIVEEANKAFEFNMQVFNELDQAGSLLAKETLEDGLPVHDGKGDLRKCPYYAAQLDKGALEGSSCPFGAALAVLRRPGLQFLLAASVALAAGLLAWYSM", "length": 316 }, "evidence": [ { "id": "A0A4X1VSV5", "url": "https://omabrowser.org/oma/group/A0A4X1VSV5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E7F079-1", "protein_name": "heme oxygenase (biliverdin-producing)", "gene_name": "hmox2b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSAVRTEDAANGTSTANGGGGVKCEEGGVTVLRPTDLSEMLAAGTKEVHQKAENTEFVKDFLRGRIRKELFKLGHVALYFTYSALEEEIERNKDHPQFAPLYFPHELHRRDALAQDLQFFYGSDWQTQISISPATQRYVQRIHQIGKDEPALLVAHAYTRYMGDLSGGQVLRKVAQRALKLPASGDGLNFYMFDNVSNAKAFKQLYRSRMNELELQQDTKLKIVEEAVLAFQFNIEIFEEIGEVGQTLEDDVFDAAPVHGEMQGDISQCPYHAAKMAASGGSSYVCQIAKTVLKNPSGQVLLAAWIAALAGLAAWYLM", "length": 318 }, "evidence": [ { "id": "A0A4X1VSV5", "url": "https://omabrowser.org/oma/group/A0A4X1VSV5/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "G3HS67-1", "protein_name": "Heme oxygenase", "gene_name": "Hmox2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSSEVETSEGVDESEKKNSVAPEKENHTKMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKELFKLATTALYFTYSALEEEMDRNKDHPAFAPLYFPMELHRKEALIKDMEYFFGEDWEEQVKCSEAAQKYVDRIHYVGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPSTGEGTQFYLFEHVDNAQQFKQFYRARMNALDMNLKTKERIVEEANKAFEYNMQIFSELDQAGSMLARENQEDGFPMHDGKGDVRKCPFYAAQPDKGTLEGSNCPFRTAMAMLRKPSLQLVLAVSVALAAGLLAWYYM", "length": 316 }, "evidence": [ { "id": "A0A4X1VSV5", "url": "https://omabrowser.org/oma/group/A0A4X1VSV5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "O70252-1", "protein_name": "Heme oxygenase 2", "gene_name": "Hmox2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSEVETSEGVDESEKNSMAPEKENHTKMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKELFKLATTALYFTYSALEEEMDRNKDHPAFAPLYFPTELHRKAALIKDMKYFFGENWEEQVKCSEAAQKYVDRIHYVGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPSTGEGTQFYLFEHVDNAQQFKQFYRARMNALDLNLKTKERIVEEANKAFEYNMQIFSELDQAGSMLARETLEDGLPVHDGKGDIRKCPFYAAQPDKGTLGGSNCPFQTTVAVLRKPSLQLILAASVALVAGLLAWYYM", "length": 315 }, "evidence": [ { "id": "A0A4X1VSV5", "url": "https://omabrowser.org/oma/group/A0A4X1VSV5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P23711-1", "protein_name": "Heme oxygenase 2", "gene_name": "Hmox2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSEVETSEGVDESENNSTAPEKENHTKMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKELFKLATTALYFTYSALEEEMDRNKDHPAFAPLYFPTELHRKEALIKDMEYFFGENWEEQVKCSEAAQKYVDRIHYVGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPSTGEGTQFYLFEHVDNAQQFKQFYRARMNALDLSMKTKERIVEEANKAFEYNMQIFSELDQAGSMLTKETLEDGLPVHDGKGDVRKCPFYAAQPDKGTLGGSNCPFRTAMAVLRKPSLQLILAASVALVAGLLAWYYM", "length": 315 }, "evidence": [ { "id": "A0A4X1VSV5", "url": "https://omabrowser.org/oma/group/A0A4X1VSV5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P30519-1", "protein_name": "Heme oxygenase 2", "gene_name": "HMOX2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGENWEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPSTGEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQAGSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFILAAGVALAAGLLAWYYM", "length": 316 }, "evidence": [ { "id": "A0A4X1VSV5", "url": "https://omabrowser.org/oma/group/A0A4X1VSV5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSV5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSV5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "response to oxidative stress", "id": "GO:0006979", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006979", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSV5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSV5" } ], "pmid": "" }, { "name": "response to hypoxia", "id": "GO:0001666", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001666", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSV5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSV5" } ], "pmid": "" }, { "name": "heme catabolic process", "id": "GO:0042167", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042167", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSV5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSV5" } ], "pmid": "" }, { "name": "host-mediated suppression of viral transcription", "id": "GO:0043922", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043922", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSV5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSV5" } ], "pmid": "" }, { "name": "negative regulation of viral life cycle", "id": "GO:1903901", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1903901", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSV5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSV5" } ], "pmid": "" }, { "name": "heme oxidation", "id": "GO:0006788", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006788", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSV5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSV5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSV5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSV5" } ], "pmid": "" }, { "name": "heme binding", "id": "GO:0020037", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0020037", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSV5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSV5" } ], "pmid": "" }, { "name": "heme oxygenase (decyclizing) activity", "id": "GO:0004392", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004392", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSV5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSV5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 26, "end_pos": 28, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "21764", "name": "", "equation": "heme b + 3 reduced [NADPH--hemoprotein reductase] + 3 O2 = biliverdin IXalpha + CO + Fe(2+) + 3 oxidized [NADPH--hemoprotein reductase] + 3 H2O + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "21764", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/21764" } ] }, { "id": "R-SSC-189398", "name": "HMOX1 dimer, HMOX2 cleave heme", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, endoplasmic reticulum membrane", "input_participant_list": [], "output_participant_list": [ "R-ALL-189385" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-189398", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-189398" } ] }, { "id": "R-SSC-6799350", "name": "Exocytosis of specific granule membrane proteins", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "plasma membrane, specific granule membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6799350", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6799350" } ] }, { "id": "R-SSC-9013009", "name": "RHOA binds effectors at the plasma membrane", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9013009", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013009" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-189385", "participant_name": "CO [cytosol]", "crossref": [ { "id": "9531", "database": "Guide to Pharmacology - Ligands", "url": "" }, { "id": "17245", "database": "ChEBI", "url": "" }, { "id": "HMDB0001361", "database": "HMDB Metabolite", "url": "" }, { "id": "C00237", "database": "COMPOUND", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 26, "end_pos": 28 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", 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"sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1VSW7-1", "uniprot_ac": "A0A4X1VSW7", "uniprot_id": "A0A4X1VSW7_PIG", "mass": { "chemical_mass": 31124.0, "monoisotopic_mass": 31124.0 }, "refseq": { "ac": "XP_005653438", "name": "gap junction beta-5 protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005653438" }, "gene_names": [ { "name": "GJB5", "type": "recommended", "evidence": [ { "id": "A0A4X1VSW7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSW7" } ] }, { "name": "GJB5", "type": "synonym", "evidence": [ { "id": "XP_005653438", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005653438" } ] } ], "protein_names": [ { "name": "Gap junction protein", "type": "recommended", "evidence": [ { "id": "A0A4X1VSW7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSW7/entry#names_and_taxonomy" } ] }, { "name": "gap junction beta-5 protein", "type": "synonym", "evidence": [ { "id": "XP_005653438", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005653438" } ] } ], "function": [ { "annotation": "Structural component of the gap junction, a specialized intercellular structure consisting of a cluster of closely packed pairs of transmembrane channels, the connexons, that allow passage of small molecules and electrical signals between neighboring cells. Forms homotypic and heterotypic channels gated by transjunctional voltage. Involved in intercellular innate immune signaling. Mediates translocation of 2',3'-cGAMP and 2',5'-oligoadenylates (2-5A) second messengers from virus-infected cells to macrophages and uninfected neighboring cells to propagate and amplify the antiviral immune response.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSW7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSW7#function" }, { "database": "UniProtKB", "id": "RU000630", "url": "https://www.uniprot.org/uniprotkb/RU000630#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSW7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSW7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GJB5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSW7", "locus": { "chromosome": "6", "start_pos": 91002984, "end_pos": 91002163, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000003585", "url": "https://www.ensembl.org/id/ENSSSCG00000003585" } ] } } ], "crossref": [ { "id": "A0A4X1VSW7", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VSW7", "database": "AlphaFoldDB", "categories": [] }, { "id": "100514847", "url": "https://www.ncbi.nlm.nih.gov/gene/100514847", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000500", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000500", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002271", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002271", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013092", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013092", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017990", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017990", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019570", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019570", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038359", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038359", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100514847", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514847", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NWSIFEG", "url": "https://omabrowser.org/oma/group/NWSIFEG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VSW7", "url": "https://www.orthodb.org/?gene=A0A4X1VSW7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11984", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11984", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11984:SF29", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11984:SF29", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00029", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00029", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-190861", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-190861", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_005653438", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005653438", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VSW7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSW7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VSW7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSW7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNWGVFEGLLSGVNKYSTAFGRVWLSLVFIFRLLVYLVTAERVWSDDHKDFSCDTRQPGCPNVCYDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYREAREKKHRERAGKDGGRLYLDPGKKRGGLWWTYVCSLVFKAGVDAAFLYVFHLFYPKYTLPRVVKCHAAPCPNTVDCFISKPAEKNIFTLFMVITAVICILLNLVELAYLVSKRCRECLAERKARAKGVGHRLDWTTSSTKQDDLLLGDLIFLGSDVPPPLLPDHPRDHVEKTTL", "length": 273, "header": "tr|A0A4X1VSW7-1|A0A4X1VSW7_PIG Isoform 1 of Gap junction protein OS=Sus scrofa OX=9823 GN=GJB5 PE=3 SV=1 CANONICAL=A0A4X1VSW7-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VSW7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSW7/entry", "sequence": { "sequence": "MNWGVFEGLLSGVNKYSTAFGRVWLSLVFIFRLLVYLVTAERVWSDDHKDFSCDTRQPGCPNVCYDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYREAREKKHRERAGKDGGRLYLDPGKKRGGLWWTYVCSLVFKAGVDAAFLYVFHLFYPKYTLPRVVKCHAAPCPNTVDCFISKPAEKNIFTLFMVITAVICILLNLVELAYLVSKRCRECLAERKARAKGVGHRLDWTTSSTKQDDLLLGDLIFLGSDVPPPLLPDHPRDHVEKTTL", "length": 273, "header": "tr|A0A4X1VSW7-1|A0A4X1VSW7_PIG Isoform 1 of Gap junction protein OS=Sus scrofa OX=9823 GN=GJB5 PE=3 SV=1 CANONICAL=A0A4X1VSW7-1" }, "locus": { "chromosome": "6", "start_pos": 91002981, "end_pos": 91002163, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000003980.2", "url": "https://www.ensembl.org/id/ENSSSCT00000003980.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000003889.2", "url": "https://www.ensembl.org/id/ENSSSCP00000003889.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSW7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSW7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100514847", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514847", "resource": "KEGG Pathway" }, { "id": "R-SSC-190861", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-190861", "resource": "Reactome", "description": "Gap junction assembly" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q2U3Y9-1", "protein_name": "Gap junction protein", "gene_name": "GJB5", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MNWSVFEGLLSGVNRYSTAFGRIWLSLVFIFRLLVYVVAAERVWSDDHKDFDCNTRQPGCTNVCYDHFFPISHIRLWALQLILVTCPSLLVIMHVAYRQAKALQHRAERGDSYRSRFPNPGKKRGGLWWTYLFSLIVKAGVDMVFLYIFYHIYRNYTLPRLVKCQLPPCPNIVDCFISRPTEKTIFTLFMVVTTCICIVLSLVEAAYLIGKRCRERLQAGTGESHCHSHDCAESASTGGQVFHGVGYKAPTASIPSASIPTTSIPTASIPTTSIPTASIPTTSIPTTLPEQEKTPS", "length": 296 }, "evidence": [ { "id": "A0A4X1VSW7", "url": "https://omabrowser.org/oma/group/A0A4X1VSW7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1N1N8-1", "protein_name": "Gap junction protein", "gene_name": "GJB5", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNWGIFEGLLSGANKYSTAFGRVWLSLVFIFRVLVYLVTAERVWSDDHKDFDCDTRQPGCSNVCFDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYRQAREKKHQEAIGKDGGRLYLDPGKKRGGLWWTYVCSLVFKAGVDATFLYVFHSIYPRYTLPRVVKCQVAPCPNVVDCFISKPEEKNIFTLFMVITALVCIVLNLVELAYLVSKRCRECLEARKARSESLDHRLDWVTSSSKQGDLLSGDLIFLDSDVPPPLLPDHPQDHVKKTML", "length": 273 }, "evidence": [ { "id": "A0A4X1VSW7", "url": "https://omabrowser.org/oma/group/A0A4X1VSW7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3H9T2-1", "protein_name": "Gap junction protein", "gene_name": "Gjb5", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MNWSVFEGLLSGVNKYSTAFGRIWLSLVFVFRVLVYLVTVERVWGEDQKDFDCNTRQPGCTNVCFDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYRKAREKRYQEEVGKGHLYLYPGKKRGGLWWTYVCSLLFKAGIDIVFLYVFHVFYPKYTLPSVVKCHATPCPNIVDCFISKPSEKNIFIIFMLITAIICILLNLVELAYLVIKRCSECMESRRALTAHPEHDPNWVNSSSKQKDLLAGDLIFLGSDTHPPLLPDHPRAHVKKTIL", "length": 271 }, "evidence": [ { "id": "A0A4X1VSW7", "url": "https://omabrowser.org/oma/group/A0A4X1VSW7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "O95377-1", "protein_name": "Gap junction beta-5 protein", "gene_name": "GJB5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"https://omabrowser.org/oma/group/A0A4X1VSW7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "cell-cell signaling", "id": "GO:0007267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007267", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSW7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSW7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "connexin complex", "id": "GO:0005922", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005922", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VSW7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VSW7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "gap junction channel activity", "id": "GO:0005243", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005243", "evidence": [ { "database": "UniProtKB", "id": 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T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VTB0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTB0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "F1N5X4-1", "protein_name": "Olfactory receptor", "gene_name": "OR2C1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MERANSSSLEGFILMGVSDHPQLETIFFVGILFSYLLTLFGNSAIILLFNLDARLHTPMYFFLSNLSSLDLAFTTSSVPQMLTNLWGADKTISYGGCVTQLYVFLWLGATECILLVVMAFDRFVAVCRPLHYTTIMNPRLCWLLAAIAWLGGLGNSVVQSTFTLQLPLCGHRRVDSFLCEVPAMIKLACVDTSLNEAVLNSVCTFFTAVPLSVILISYCYIAQAVLKIRSAEGRRKAFNTCLSHLVVVLLFYGSAIYGYLLPAKTSKQDQGKFISLFYSVVTPMVNPLIYTLRNKEVKGALRRLLGKGREVS", "length": 312 }, "evidence": [ { "id": "A0A4X1VTB0", "url": 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family member 24 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020942414", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020942414" } ] } ], "function": [ { "annotation": "May act as a GTPase-activating protein for Rab family protein(s). Involved in neuronal projections development, probably through a negative modulation of ARF6 function. Involved in the regulation of synaptic vesicle trafficking.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VUP7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VUP7#function" }, { "database": "UniProtKB", "id": "ARBA00046245", "url": "https://www.uniprot.org/uniprotkb/ARBA00046245#function" }, { "database": "UniProtKB", "id": "A0A4X1VTM9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTM9#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VUP7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VUP7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TBC1D24", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VUP7", "locus": { "chromosome": "3", "start_pos": 39545218, "end_pos": 39571277, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000027098", "url": "https://www.ensembl.org/id/ENSSSCG00000027098" } ] } } ], "crossref": [ { "id": "A0A4X1VUP7", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VUP7", "database": "AlphaFoldDB", "categories": [] }, { "id": "102160562", "url": "https://www.ncbi.nlm.nih.gov/gene/102160562", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000195", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000195", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006571", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006571", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035969", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035969", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:102160562", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102160562", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NTSMFMS", "url": "https://omabrowser.org/oma/group/NTSMFMS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VUP7", "url": "https://www.orthodb.org/?gene=A0A4X1VUP7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23354", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23354", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23354:SF122", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23354:SF122", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00566", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00566", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07534", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07534", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8854214", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8854214", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020942414", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020942414", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VTM9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTM9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VTM9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTM9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VUP7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VUP7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VUP7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VUP7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDAPGYNCFVDRDRMDAAIQDLGPKELSCTDVQELKQLARQGYWAHSYALRGKVYQRLIRDIPCRTVTPDASVYSDIVGKIVGQHSGSSLPLPEFVDNTQVPSYCLNPQGEGAVRKILLCIANQFPDVSFCPALPAVVALLLHYSMDEAECFEKACRILACNDPSRKLIDQSFLAFESSCMTFGDLVNKYCQAAHKLMVAVSEDVLQVYADWQRWLFGELPLSYFSRVFDVFLVEGYKVLYRVALAILKFFHKVRAGQPLESDNVKQDIRAFVKDIAKTVSPEKLLEKAFAIRLFSRKEIQLLQMANEKALKQRGITVKQKSVSLSRRQFVHLAVHAENFHSEVVGVREMRDIWSWVPERFALCQPLLLFSSLQHGYSLTRFFLHCEGHEPTVLLIKTTQKEVCGAYLSTDWAERNKFGGKLGFFGTGECFVFRLQPEVQRYEWVVIKHPELTRPVSSENTTSLPSLCHSASPDASDRLSPFLAARHFNLPSKTESLFMAGGNDCLIIGGGGGQALYIDGDLNRGRTGHCDTFNNQPLCSENFLIAAVEAWGFQDPDTQ", "length": 559, "header": "tr|A0A4X1VUP7-1|A0A4X1VUP7_PIG Isoform 1 of TBC1 domain family member 24 OS=Sus scrofa OX=9823 GN=TBC1D24 PE=1 SV=1 CANONICAL=A0A4X1VUP7-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VTM9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTM9/entry", "sequence": { "sequence": "MDAPGYNCFVDRDRMDAAIQDLGPKELSCTDVQELKQLARQGYWAHSYALRGKVYQRLIRDIPCRTVTPDASVYSDIVGKIVGQHSGSSLPLPEFVDNTQVPSYCLNPQGEGAVRKILLCIANQFPDVSFCPALPAVVALLLHYSMDEAECFEKACRILACNDPSRKLIDQSFLAFESSCMTFGDLVNKYCQAAHKLMVAVSEDVLQVYADWQRWLFGELPLSYFSRVFDVFLVEGYKVLYRVALAILKFFHKVRAGQPLESDNVKQDIRAFVKDIAKTVSPEKLLEKAFAIRLFSRKEIQLLQMANEKALKQRGITVKQKRFFLHCEGHEPTVLLIKTTQKEVCGAYLSTDWAERNKFGGKLGFFGTGECFVFRLQPEVQRYEWVVIKHPELTRPVSSENTTSLPSLCHSASPDASDRLSPFLAARHFNLPSKTESLFMAGGNDCLIIGGGGGQALYIDGDLNRGRTGHCDTFNNQPLCSENFLIAAVEAWGFQDPDTQ", "length": 500, "header": "tr|A0A4X1VTM9-1|A0A4X1VUP7_PIG Computationally mapped isoform of TBC1 domain family member 24 OS=Sus scrofa OX=9823 GN=TBC1D24 PE=1 SV=1 CANONICAL=A0A4X1VUP7-1" }, "locus": { "chromosome": "3", "start_pos": 39556062, "end_pos": 39550329, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050489.2", "url": "https://www.ensembl.org/id/ENSSSCT00000050489.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051718.2", "url": "https://www.ensembl.org/id/ENSSSCP00000051718.2" } ] } }, { "isoform_ac": "A0A4X1VUP7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VUP7/entry", "sequence": { "sequence": "MDAPGYNCFVDRDRMDAAIQDLGPKELSCTDVQELKQLARQGYWAHSYALRGKVYQRLIRDIPCRTVTPDASVYSDIVGKIVGQHSGSSLPLPEFVDNTQVPSYCLNPQGEGAVRKILLCIANQFPDVSFCPALPAVVALLLHYSMDEAECFEKACRILACNDPSRKLIDQSFLAFESSCMTFGDLVNKYCQAAHKLMVAVSEDVLQVYADWQRWLFGELPLSYFSRVFDVFLVEGYKVLYRVALAILKFFHKVRAGQPLESDNVKQDIRAFVKDIAKTVSPEKLLEKAFAIRLFSRKEIQLLQMANEKALKQRGITVKQKSVSLSRRQFVHLAVHAENFHSEVVGVREMRDIWSWVPERFALCQPLLLFSSLQHGYSLTRFFLHCEGHEPTVLLIKTTQKEVCGAYLSTDWAERNKFGGKLGFFGTGECFVFRLQPEVQRYEWVVIKHPELTRPVSSENTTSLPSLCHSASPDASDRLSPFLAARHFNLPSKTESLFMAGGNDCLIIGGGGGQALYIDGDLNRGRTGHCDTFNNQPLCSENFLIAAVEAWGFQDPDTQ", "length": 559, "header": "tr|A0A4X1VUP7-1|A0A4X1VUP7_PIG Isoform 1 of TBC1 domain family member 24 OS=Sus scrofa OX=9823 GN=TBC1D24 PE=1 SV=1 CANONICAL=A0A4X1VUP7-1" }, "locus": { "chromosome": "3", "start_pos": 39556062, "end_pos": 39550329, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047522.3", "url": "https://www.ensembl.org/id/ENSSSCT00000047522.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033433.1", "url": "https://www.ensembl.org/id/ENSSSCP00000033433.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VTM9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTM9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:102160562", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102160562", "resource": "KEGG Pathway" }, { "id": "R-SSC-8854214", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8854214", "resource": "Reactome", "description": "TBC/RABGAPs" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2K5B0-1", "protein_name": "TBC1 domain family member 24", "gene_name": "Tbc1d24", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSPGYNCFVDKDKMDASIQDLGPKELNYTELQELKQLARQGYWAQSHALRGKVYQRLIRDIPCRTVTPDASVYSDIVGKIVGKHSSSSLPLPEFVDNTQVPTYCLNPRGEGAVRKILLCIANQFPDISFCPALPAVVALLLHYSIDEAECFEKACRILSCNDPGKKLIDQSFLAFESSCMTFGDLVNKYCQAAHKLMVAVSEDVLQVYSDWQRWLFGELPLNYFARVFDVFLVEGYKVLYRVALAILKFFHKVRAGQPLESDNVKQDIRMFVKDIAKTVSPEKLLEKAFAIRLFSRKEIQLLQMANEKALRQKGITVKQKSVSLSKRQFVHLAVHAENFRSEIVSVKEMRDIWSWIPERFALCQPLLLFSSLQHGYSLSRFYFQCEGHEPTLLLIKTTQKEVCGAYLSTDWSERNKFGGKLSFFGTGECFVFRLQPEVQRYEWVVIKHPELTKAASFKSSEAAANPCLISHSVSSDPADRLSPFLAARHFNLPSKTESMFMAGGNDCLIIGGGGGQALYIDGDLNRGRTGHCDTFNNQPLCSESFLIAAVEAWGFQDPDTQ", "length": 562 }, "evidence": [ { "id": "A0A4X1VUP7", "url": "https://omabrowser.org/oma/group/A0A4X1VUP7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A1D5P4W1-1", "protein_name": "TBC1 domain family member 24", "gene_name": "TBC1D24", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MDEYNRFVDWDKMDVTVQSQDIKELTCTEFQELKQLARQGYWAKNHSLRAKVYHKLISNIPCRTVTPDANVYRDIVVKIVGKRSSSSLPLPEFVDDSLVPTYCLNAEGIGAVRKIILCIANQFPDISFCPALPSVIALLLHYSKDEAECFEQVCRILACNDPSKRLIDQTFLAFESSCMTFGDLVNKYCQAAHKLMVAVSEDVLEVYSDWQRWLFGELPMLYIARVFDVFLVEGYKVLYRVALAILKFFHKVRAGQPMESDSVQQDIRAFVRDIAKSVSPERLLEKAFAIRLFSRKEIQLLQMANEKALQQKGITVKQKSVTSPKRQNVHLAVHAENFKSEIVSVKEMRDIWSWIPERFALCQPLLLFTTLEHGCSLSRFYSHSEGHEPTLLLIKTTAKEVCGAYLSTDWSERRRGGNKLSFFGTGECFVFRLQPEVERYEWVIIKHPELAASGSEPENHASPASNALSFRSTPSDPSDRLSPFLSARHFNLPSKTASMFMAGSSECIIIGGGDGQALYLDADLNHGRTSHCDTFNNQPLCSESFQISVLEVWGFRDTVNG", "length": 561 }, "evidence": [ { "id": "A0A4X1VUP7", "url": "https://omabrowser.org/oma/group/A0A4X1VUP7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8M1RN56-1", "protein_name": "TBC1 domain family member 24", "gene_name": "tbc1d24", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRIQSQICPLPDRQSKANQLEQNGRLVPLILSSVQRVRSEVMAGDCGVFVDWSQMGDVSRDAAPGKTEYKDLKELKQHARSGQWAKNHSQRSAVYQHLLKALPCRTVTPDAEVYRDIVGNSTSKRNPSAYPLPEFVDGTAVPQYCLKAESIGSVHAVISCVAGQFPDISHCPSLPAVTALMMHWSPDEAQCFESVSRMLACNEPGRRLLDQTFLAYESACMTFGDLVHKYCPAAHKLMVATATDVLEVYSDWQRWVFGDLPFSFAARVLDVFLVEGYKVLYRVALAILKFYRKQFVASNSAPSKQDSAAVRRDIQTFVQSIGKSVTPDKLLEKAFSIRLFSRKEITLLQLANEKSLQQKGITVKQKRQNVQLAVNADNFSSEIVSAKEIRDIWSWIPERFALCQPQLLFTTSTHGCSLNRFYAHCEGYEPTLLLIRTTDREVCGAFLSTDWEERKRGGNKLSFFGTGECFVFRMKPEMERYEWVIIKHPELAKSAQSAEDQSSVEDNGTPHSGETLEKPTTDSSHLSPFLSARHFNLNSRNTSMFMAGNVDSIIIGGGDGNALYIDSELNHGRTERCLTFDNPPLCAESFQVALLEVWGFKDAMGS", "length": 606 }, "evidence": [ { "id": "A0A4X1VUP7", "url": "https://omabrowser.org/oma/group/A0A4X1VUP7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q3UUG6-1", "protein_name": "TBC1 domain family member 24", "gene_name": "Tbc1d24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDPPGYNCFVDKDKMDASIQDLGPKELNCTELQELKQLARQGYWAQSHTLRGKVYQRLIRDIPCRTVTPDASVYSDIVGKIVGKHSSSSLPLPEFVDNTQVPTYCLNTRGEGAVRKILLCIANQFPDISFCPALPAVVALLLHYSIDEAECFEKACRILSCNDPTKKLIDQSFLAFESSCMTFGDLVNKYCQAAHKLMVAVSEDVLQVYSDWQRWLFGELPLNYFARVFDVFLVEGYKVLYRVALAILKFFHKVRAGQPLESDNVKQDIRMFVKDIAKTVSPEKLLEKAFAIRLFSRKEIQLLQMANEKALRQKGITVKQKSVSLSKRQFVHLAVHAENFHSEIVSVKEMRDIWSWIPERFALCQPLLLFSSLQHGYSLSRFYFQCEGHEPTLLLIKTTQKEVCGAYLSTDWSERTKFGGKLGFFGTGECFVFRLQPEVQRYEWVVIKHPELTKATSLKSSEAAGSSSLISHCSSDPADRLSPFLAARHFNLPSKTESMFMAGGNDCLIIGGGGGQALYVDGDLNRGRTGHCDTFNNQPLCSENFLIAAVEAWGFQDPDTE", "length": 561 }, "evidence": [ { "id": "A0A4X1VUP7", "url": "https://omabrowser.org/oma/group/A0A4X1VUP7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VUP7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VUP7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VUP7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VUP7" } ], "pmid": "" }, { "name": "cytoplasmic vesicle membrane", "id": "GO:0030659", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030659", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VUP7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VUP7" } ], "pmid": "" }, { "name": "presynapse", "id": "GO:0098793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098793", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VUP7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VUP7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "neuron projection development", "id": "GO:0031175", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031175", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VUP7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VUP7" } ], "pmid": "" }, { "name": "cellular response to oxidative stress", "id": "GO:0034599", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034599", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VUP7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VUP7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 460, "end_pos": 462, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1VUP7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VUP7" }, { "id": "PS51886", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51886" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "TLDc", "eco_id": "ECO_0000259", "start_pos": 343, "end_pos": 554, "start_aa": "Glu", "end_aa": "Gln", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 460, "end_pos": 462 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1VTS5-1", "uniprot_ac": "A0A4X1VTS5", "uniprot_id": "A0A4X1VTS5_PIG", "mass": { "chemical_mass": 73980.0, "monoisotopic_mass": 73980.0 }, "refseq": { "ac": "XP_003127878", "name": "ralA-binding protein 1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127878" }, "gene_names": [ { "name": "RALBP1", "type": "recommended", "evidence": [ { "id": "A0A4X1VTS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5" } ] }, { "name": "RALBP1", "type": "synonym", "evidence": [ { "id": "XP_003127878", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127878" } ] } ], "protein_names": [ { "name": "RalA-binding protein 1", "type": "recommended", "evidence": [ { "id": "A0A4X1VTS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5/entry#names_and_taxonomy" } ] }, { "name": "7.6.2.2", "type": "synonym", "evidence": [ { "id": "A0A4X1VTS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5/entry#names_and_taxonomy" } ] }, { "name": "7.6.2.3", "type": "synonym", "evidence": [ { "id": "A0A4X1VTS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5/entry#names_and_taxonomy" } ] }, { "name": "Dinitrophenyl S-glutathione ATPase", "type": "synonym", "evidence": [ { "id": "A0A4X1VTS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5/entry#names_and_taxonomy" } ] }, { "name": "Ral-interacting protein 1", "type": "synonym", "evidence": [ { "id": "A0A4X1VTS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5/entry#names_and_taxonomy" } ] }, { "name": "ralA-binding protein 1", "type": "synonym", "evidence": [ { "id": "XP_003127878", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127878" } ] } ], "function": [ { "annotation": "Could also function as a primary ATP-dependent active transporter for glutathione conjugates of electrophiles. May also actively catalyze the efflux of a wide range of substrates including xenobiotics like doxorubicin (DOX) contributing to cell multidrug resistance.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VTS5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5#function" }, { "database": "UniProtKB", "id": "ARBA00053243", "url": "https://www.uniprot.org/uniprotkb/ARBA00053243#function" } ] }, { "annotation": "Multifunctional protein that functions as a downstream effector of RALA and RALB. As a GTPase-activating protein/GAP can inactivate CDC42 and RAC1 by stimulating their GTPase activity. As part of the Ral signaling pathway, may also regulate ligand-dependent EGF and insulin receptors-mediated endocytosis. During mitosis, may act as a scaffold protein in the phosphorylation of EPSIN/EPN1 by the mitotic kinase cyclin B-CDK1, preventing endocytosis during that phase of the cell cycle. During mitosis, also controls mitochondrial fission as an effector of RALA. Recruited to mitochondrion by RALA, acts as a scaffold to foster the mitotic kinase cyclin B-CDK1-mediated phosphorylation and activation of DNM1L.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VTS5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5#function" }, { "database": "UniProtKB", "id": "ARBA00055048", "url": "https://www.uniprot.org/uniprotkb/ARBA00055048#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VTS5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RALBP1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5", "locus": { "chromosome": "6", "start_pos": 98550933, "end_pos": 98598206, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000003680", "url": "https://www.ensembl.org/id/ENSSSCG00000003680" } ] } } ], "crossref": [ { "id": "A0A4X1VTS5", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VTS5", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd04381", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04381", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100519155", "url": "https://www.ncbi.nlm.nih.gov/gene/100519155", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000198", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000198", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008936", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008936", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039767", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039767", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049041", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049041", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100519155", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519155", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LMHYKRL", "url": "https://omabrowser.org/oma/group/LMHYKRL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VTS5", "url": "https://www.orthodb.org/?gene=A0A4X1VTS5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12783", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12783", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12783:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12783:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00620", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00620", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF20924", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF20924", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-9013148", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013149", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013149", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003127878", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127878", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "19121", "url": "https://www.rhea-db.org/rhea/19121", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "38963", "url": "https://www.rhea-db.org/rhea/38963", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1VTS5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VTS5-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTECFLPPPSSPGEHRRVEHGSGLTRTPSSEEISPTKFPGLYRTGEPSPPHDNLHEPPDIVSDDEKDHGKKKGKFKKKEKRTEGYAAFQEDSSGDEAESPSKMKRSKGIHVFKKPSFSKKKEKDFKIKEKPKEEKHKEEKHKEEKHKEKKSKDLTAADVVKQWKEKKKKKKPIQEPEVAPVDVPSLKPIFGIPLAEAAERTMMYDGVRLPAVFRECVDYVEKHGMRCEGIYRVSGIKSKVDELKAAYDREESPNLEEYEPNTVASLLKQYLRDLPENLLTKELTPRFEEACGRSSEGEKVQELQRLLWELPECNQLLISWLIVHMDHVISKELETKMNIQNISIVLSPTVQISNRVLYVFFTHVQELFGNVILKPVTKPLRWSNMATMPTLPETQESIKEEIRRQEFLLNCLHRDLQGGIKDLSKEERLWEVQRILTALKRKLREAKRQECETKIAQEIASLSKEDVSKEEMNENEEVINILLAQENEILTEQEELLAMEQFLRRQIASEKEEIERLRAEIAEIQSRQQHGRSETEEYSSESESESEDEEELQLILEDLQRQNEELEIKNNHLNQAIHEEREAIIELRVQLRLLQLQRARPEPLPPAGEPEPSAAKEQPLGGKEQAWPSPGRDRKETPI", "length": 639, "header": "tr|A0A4X1VTS5-1|A0A4X1VTS5_PIG Isoform 1 of RalA-binding protein 1 OS=Sus scrofa OX=9823 GN=RALBP1 PE=4 SV=1 CANONICAL=A0A4X1VTS5-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VTS5-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5/entry", "sequence": { "sequence": "MTECFLPPPSSPGEHRRVEHGSGLTRTPSSEEISPTKFPGLYRTGEPSPPHDNLHEPPDIVSDDEKDHGKKKGKFKKKEKRTEGYAAFQEDSSGDEAESPSKMKRSKGIHVFKKPSFSKKKEKDFKIKEKPKEEKHKEEKHKEEKHKEKKSKDLTAADVVKQWKEKKKKKKPIQEPEVAPVDVPSLKPIFGIPLAEAAERTMMYDGVRLPAVFRECVDYVEKHGMRCEGIYRVSGIKSKVDELKAAYDREESPNLEEYEPNTVASLLKQYLRDLPENLLTKELTPRFEEACGRSSEGEKVQELQRLLWELPECNQLLISWLIVHMDHVISKELETKMNIQNISIVLSPTVQISNRVLYVFFTHVQELFGNVILKPVTKPLRWSNMATMPTLPETQESIKEEIRRQEFLLNCLHRDLQGGIKDLSKEERLWEVQRILTALKRKLREAKRQECETKIAQEIASLSKEDVSKEEMNENEEVINILLAQENEILTEQEELLAMEQFLRRQIASEKEEIERLRAEIAEIQSRQQHGRSETEEYSSESESESEDEEELQLILEDLQRQNEELEIKNNHLNQAIHEEREAIIELRVQLRLLQLQRARPEPLPPAGEPEPSAAKEQPLGGKEQAWPSPGRDRKETPI", "length": 639, "header": "tr|A0A4X1VTS5-1|A0A4X1VTS5_PIG Isoform 1 of RalA-binding protein 1 OS=Sus scrofa OX=9823 GN=RALBP1 PE=4 SV=1 CANONICAL=A0A4X1VTS5-1" }, "locus": { "chromosome": "6", "start_pos": 98576876, "end_pos": 98552306, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059511.2", "url": "https://www.ensembl.org/id/ENSSSCT00000059511.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038258.1", "url": "https://www.ensembl.org/id/ENSSSCP00000038258.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VTS5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100519155", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519155", "resource": "KEGG Pathway" }, { "id": "R-SSC-9013148", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "resource": "Reactome", "description": "CDC42 GTPase cycle" }, { "id": "R-SSC-9013149", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013149", "resource": "Reactome", "description": "RAC1 GTPase cycle" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0XA86-1", "protein_name": "Dinitrophenyl S-glutathione ATPase", "gene_name": "RALBP1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MTECFLPPTSSPSEHRRVEHSGGLARTPSSEEISPTKFPGLYRTGEPSPPHDSLHEPPDIVSDDEKEHGKKKGKFKKKEKRTEGYAAFQEDSSGDEAESPSKLKRSKGIHVFKKPSFSKKKEKDFKIKEKPKDEKHKEDKHKEDKHKEKKSKDLTAADVVKQWKEKKKKKKPIQEPEIPQVDVPSHRPVFGIPLSDAVDRTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYDREESPNLEEYEPNTVASLLKQYLRELPENLLTKELMPRFEDACGKSTEAEKVQECQRLLKELPECNHLVISWLIVHMDHVIAKELETKMNIQNISIVLSPTVQISNRVLYVFFTHVQEFFGNVTLKQVTKPLRWSNMATMPALPETQESIKEEIRRQEFLLNCLHRDLQAGIKDLSKEERLWEVQRILTALKRKLREAKRQECETKIAQEIASLSKEDVSKEEMNENEEVINILLAQENEILTEQEELLAMEQFLRRQIASEKEEIDRLRAEIAEIQSRQQHGRSETEEYSSESESESEDEEELQVILEDLQRQNEELEIKNNHLNQAIHEEREAIIELRVQLRLLQRAKSEQQAQEEEEAEKRVGASQQQRDGALETKAAKEQPKASKEQQVKPSPSKDRKETPI", "length": 654 }, "evidence": [ { "id": "A0A4X1VTS5", "url": "https://omabrowser.org/oma/group/A0A4X1VTS5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1MPV3-1", "protein_name": "RalA-binding protein 1", "gene_name": "RALBP1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTECFLPPTSSPSEHRRVEHGSGLTRTPSSEEISPTKFPGLYRTGEPSPPHDSLHEPPDVVSDDEKDHGKKKGKFKKKEKRTEGYAAFQEDSSGDEAESPSKMKRSKGIHVFKKPSFSKKKEKDFKIKEKPKEEKHKEEKHKEEKHKEKKSKDLTAADVVKQWKEKKKKKKPIQEPEVPQLDVPSLRPIFGIPLADAVERTMMYDGVRLPAVFRECVDYVEKHGMKCEGIYRVSGIKSKVDELKAAYDREESPNLEEYEPNTVASLLKQYLRDLPENLLTKELLPRFEEACGRSSEAEKVQEFQRLLEDLPECSRLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTVQISNRVLYVFFTHVQELFGNVTLKQVTKPLRWSNMATMPTLPETQESIKEEIRRQEFLLNCLHRDLQGGIKDLSKEERLWEVQRILTALKRKLREAKRQECETKIAQEIASLSKEDVSKEEMNENEEVINILLAQENEILTEQEELLAMEQFLRRQIASEKEEIERLRAEIAEIQSRQQHGRSETEEYSSDSESESEDEDELQLILQDLQRQNEELEIKNNHLNQAIHEEREAIIELRVQLRLLQLQRARPEPLAEPEPGAREPPPPTKEQARPSPGRERKETPI", "length": 635 }, "evidence": [ { "id": "A0A4X1VTS5", "url": "https://omabrowser.org/oma/group/A0A4X1VTS5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3HZ30-1", "protein_name": "RalA-binding protein 1", "gene_name": "Ralbp1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTECFLPPTSSPSEHRRAEHGSGLTRTPSSEEISPTKFPGLYRTGEPSPPHDILHEPPDIVSDDEKDHGKKKGKFKKKEKRTEGYAAFQEDSSGDEAESPSKMKRSKGIHVFKKPSFSKKKEKDFKIKEKPKEEKHKEDKHKEKKSKDLTAADVVKQWKEKKKKKKPIQEPEVPQVDVPSLRPIFGVPLADAVERTMMYDGVRLPAVFRECIDFMEKHGMKCEGVYRVSGIKSKVDELKAAYDREESPNLEEYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRATETEKVQEFQRLLKELPECNHLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTVQISNRVLYVLFTHVQELFGTVVLKQVTRPLRWSNMATMPTLPETQAGIKEEIRRQEFLLNCLHRDLQGGIKDLSKEERLWEVQRILTALKRKLREAKRQECETKIAQEIASLSKEDVSKEEMNENEEVINILLAQENEILTEQEELLAMEQFLRRQIASEKEEIERLRAEIAEIQSRQQHGRSETEEYSSESESESEDEEELQVILGDLQRQNEELEIKNNHLNQAVHEEREAIIELRVQLRLLQMQRAKSEQQLQEEEEPERRGGIGPPPCDGVLEVKAAKEQVKPSPSKDRKETPI", "length": 643 }, "evidence": [ { "id": "A0A4X1VTS5", "url": "https://omabrowser.org/oma/group/A0A4X1VTS5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q15311-1", "protein_name": "RalA-binding protein 1", "gene_name": "RALBP1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTECFLPPTSSPSEHRRVEHGSGLTRTPSSEEISPTKFPGLYRTGEPSPPHDILHEPPDVVSDDEKDHGKKKGKFKKKEKRTEGYAAFQEDSSGDEAESPSKMKRSKGIHVFKKPSFSKKKEKDFKIKEKPKEEKHKEEKHKEEKHKEKKSKDLTAADVVKQWKEKKKKKKPIQEPEVPQIDVPNLKPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYDREESTNLEDYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTVQISNRVLYVFFTHVQELFGNVVLKQVMKPLRWSNMATMPTLPETQAGIKEEIRRQEFLLNCLHRDLQGGIKDLSKEERLWEVQRILTALKRKLREAKRQECETKIAQEIASLSKEDVSKEEMNENEEVINILLAQENEILTEQEELLAMEQFLRRQIASEKEEIERLRAEIAEIQSRQQHGRSETEEYSSESESESEDEEELQIILEDLQRQNEELEIKNNHLNQAIHEEREAIIELRVQLRLLQMQRAKAEQQAQEDEEPEWRGGAVQPPRDGVLEPKAAKEQPKAGKEPAKPSPSRDRKETSI", "length": 655 }, "evidence": [ { "id": "A0A4X1VTS5", "url": "https://omabrowser.org/oma/group/A0A4X1VTS5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q62172-1", "protein_name": "RalA-binding protein 1", "gene_name": "Ralbp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTECFLPPSSSPSEHRRAEHGSGLTRTPSSEEISPTKFPGLYRTGEPSPPHDVLHEPPDTVSDDDKDHGKKKGKFKKKEKRTEGYAAFQEDSSGDEAESPSKVKRSKGIHVFKKPSFSKKKEKDFKIKEKPKEEKHKEEKHKEEKHKEKKSKDLTAADVVKQWKEKKKKKKPIQEPEVPQMDAPSVKPIFGVPLVDAVERTMMYDGVRLPAVFRECVDYMEKHGMKCEGVYRVSGIKSKVDELKAAYDREESPNLEEYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGKTTEMEKVQEFQRLLRELPECNHLLLSWLIVHLDHVIAKELETKMNIQNISIVLSPTVQISNRVLYVLFTHVQELFGTVVLKQVTRPLRWSNMATMPTLPETQAGIKEEIRRQEFLLNCLHRDLQGGIKDLSKEERLWEVQRILTALKRKLREAKRQECETKIAQEIASLSKEDVSKEEMNENEEVINILLAQENEILTEQEELLAMEQFLRRQIASEKEEIDRLRAEIAEIQSRQQHGRSETEEYSSDSESESEDEEELQLILEDLQRQNEELEIKNNHLNQAVHEEREAIIELRVQLRLLQMQRAKSEQQPQEEEEPERRGGIGPPPCDGVLEVRVAKEQAKASPSKDRKETPI", "length": 648 }, "evidence": [ { "id": "A0A4X1VTS5", "url": "https://omabrowser.org/oma/group/A0A4X1VTS5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q62796-1", "protein_name": "RalA-binding protein 1", "gene_name": "Ralbp1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTECFLPPTSSPSEHRRAEHGSGLTRTPSSEEISPTKFPELYRTGEPSPPHDILHEPPDIVSDDEKDHGKKKGKFKKKEKRTEGYVAFQEDSSGDEAESPSKMKRSKGIHVFKKPSFSKKKEKDFKIKEKPKEEKHKEEKHKEEKHKEKKCKDFTAADVVKQWKEKKKKKKPTQEPEVPQTDAPSLRPIFGAPFADAVERTMMYDGIRLPAVFRECVDYMEKHGMKCEGIYRVSGIKSKVDELKAAYDREESPNLEEYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTEVEKVQEFQRLLRELPEYNHLLLSWLIVHMDHVIAKELETKMNIQNISIVLSPTVQISNRVLYVLFTHVQELFGTVLLKQVTRPLRWSNMATMPTLPETQAGIKEEIRRQEFLLNCLHRDLQGGIKDFSKEERLWEVQRILTALKRKLREAKRQECETKIAQEIASLSKEDVSKEETNENEEVINILLAQENEILTEQEELLAMEQFLRRQIASEKEEIDRLRAEIAEIQSRQHGRSETEEYSSDSESESEDEEELQIILEDLQRQNEELEIKNNHLNQAVHEEREAIVELRVQLRLLQMLRAKSEQQLQEEEEPERRGGTGPLPCEGVLEVRAAKEQAKPSPSKDRKETPI", "length": 647 }, "evidence": [ { "id": "A0A4X1VTS5", "url": "https://omabrowser.org/oma/group/A0A4X1VTS5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9VDG2-1", "protein_name": "RalA-binding protein 1", "gene_name": "Rlip", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MDFDSPEEKEFPGLYASEAADAKSRKSKEESDFSEDHDHSKKDLLIGRRKDKKEKGKDRGYAALEGESSPEEELDTKSPSKSKKSKTFKFTSSKSKEKREKSRDKSEKDSKHAEEEPSVSHKVKEKERDKEKDRDEPKKKDKEEKRKEKDKKADKKDKKDKKSKQLSQQQDDVSAAEEVLALGYPVFGVSVSLATERSRCHDGVDIPLVVRDCIDFLQDHLKCEQIYKIEPIKTRLMHFKRLYNNREHDSAVDELNLPTACSLLKLFLRELPEPLLTTDLVARFEEVASHPKVTTQQAELQQLLEQLPKCNRTLLAWVLLHFDAVIQQERHNKLNAQSLAMLLSPTLQMSHRLMVALLCHCNNLFADVQLIKYVPPLTSTSPKLPDTPEDIQTELRKQDSLLSQIHSEMNAGFITKKREEQLWEVQRIITQLKRKLRTFEKKQEKTAEEVDNSSSAPPAVASEDTTDSKPAGTPAVSTNNSISQEEPKTDTLTPKDAPNDFTIDPSTGFILLPKSNPHRENLLRLQIEYDELMEWQNELKARIVAERNEVYRLKQLYEQQSINSQMASLASGSQAPPESDYERIIEHYTRENALLEHKKNMLGMELKEERRACIALQVELRLQQF", "length": 625 }, "evidence": [ { "id": "A0A4X1VTS5", "url": "https://omabrowser.org/oma/group/A0A4X1VTS5/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "spindle pole", "id": "GO:0000922", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000922", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VTS5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VTS5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VTS5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VTS5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VTS5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5" } ], "pmid": "" }, { "name": "nuclear body", "id": "GO:0016604", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016604", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VTS5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VTS5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VTS5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5" } ], "pmid": "" }, { "name": "ABC-type xenobiotic transporter activity", "id": "GO:0008559", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008559", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VTS5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5" } ], "pmid": "" }, { "name": "small GTPase binding", "id": "GO:0031267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031267", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VTS5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5" } ], "pmid": "" }, { "name": "ABC-type glutathione S-conjugate transporter activity", "id": "GO:0015431", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015431", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VTS5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "small GTPase-mediated signal transduction", "id": "GO:0007264", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007264", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VTS5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5" } ], "pmid": "" }, { "name": "receptor-mediated endocytosis", "id": "GO:0006898", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006898", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VTS5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5" } ], "pmid": "" }, { "name": "positive regulation of mitochondrial fission", "id": "GO:0090141", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090141", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VTS5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5" } ], "pmid": "" }, { "name": "xenobiotic detoxification by transmembrane export across the plasma membrane", "id": "GO:1990961", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990961", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VTS5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5" } ], "pmid": "" }, { "name": "doxorubicin transport", "id": "GO:1900753", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900753", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VTS5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 341, "end_pos": 343, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "19121", "name": "", "equation": "an S-substituted glutathione(in) + ATP + H2O = an S-substituted glutathione(out) + ADP + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "19121", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/19121" } ] }, { "id": "38963", "name": "", "equation": "leukotriene C4(in) + ATP + H2O = leukotriene C4(out) + ADP + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "38963", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/38963" } ] }, { "id": "R-SSC-9013144", "name": "RAC1 GAPs stimulate RAC1 GTPase activity", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9013144", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013144" } ] }, { "id": "R-SSC-9013161", "name": "CDC42 GAPs stimulate CDC42 GTPase activity", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9013161", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013161" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1VTS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VTS5" }, { "id": "PS50238", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50238" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Rho-GAP", "eco_id": "ECO_0000259", "start_pos": 192, "end_pos": 380, "start_aa": "Ile", "end_aa": "Leu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 341, "end_pos": 343 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1VV07-1", "uniprot_ac": "A0A4X1VV07", "uniprot_id": "A0A4X1VV07_PIG", "mass": { "chemical_mass": 11488.0, "monoisotopic_mass": 11488.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "Peptidyl-prolyl cis-trans isomerase", "type": "recommended", "evidence": [ { "id": "A0A4X1VV07", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV07/entry#names_and_taxonomy" } ] }, { "name": "5.2.1.8", "type": "synonym", "evidence": [ { "id": "A0A4X1VV07", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV07/entry#names_and_taxonomy" } ] }, { "name": "PPIase", "type": "synonym", "evidence": [ { "id": "A0A4X1VV07", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV07/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VV07", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV07#function" }, { "database": "UniProtKB", "id": "RU363019", "url": "https://www.uniprot.org/uniprotkb/RU363019#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VV07", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV07" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV07", "locus": {} } ], "crossref": [ { "id": "A0A4X1VV07", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VV07", "database": "AlphaFoldDB", "categories": [] }, { "id": "IPR002130", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002130", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029000", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029000", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "CGELATE", "url": "https://omabrowser.org/oma/group/CGELATE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR11071", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11071", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11071:SF561", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11071:SF561", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00160", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00160", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "16237", "url": "https://www.rhea-db.org/rhea/16237", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1VV07", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV07", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VV07-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV07-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MCQGGDFTNHNGTGGKSIYGKKFDDENCILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLEGKHVVFGEVTEGLDVLRQIEVGGRVGEQEGGSGPGGGWGKKGRAGCP", "length": 110, "header": "tr|A0A4X1VV07-1|A0A4X1VV07_PIG Isoform 1 of Peptidyl-prolyl cis-trans isomerase OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A4X1VV07-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VV07-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV07/entry", "sequence": { "sequence": "MCQGGDFTNHNGTGGKSIYGKKFDDENCILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLEGKHVVFGEVTEGLDVLRQIEVGGRVGEQEGGSGPGGGWGKKGRAGCP", "length": 110, "header": "tr|A0A4X1VV07-1|A0A4X1VV07_PIG Isoform 1 of Peptidyl-prolyl cis-trans isomerase OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A4X1VV07-1" }, "locus": { "chromosome": "6", "start_pos": 95374750, "end_pos": 95367530, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032542.3", "url": "https://www.ensembl.org/id/ENSSSCT00000032542.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021346.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021346.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VV07", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV07" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VV07", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV07" } ], "pmid": "" }, { "name": "catalytic step 2 spliceosome", "id": "GO:0071013", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071013", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VV07", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV07" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "protein folding", "id": "GO:0006457", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006457", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VV07", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV07" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "cyclosporin A binding", "id": "GO:0016018", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016018", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VV07", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV07" } ], "pmid": "" }, { "name": "peptidyl-prolyl cis-trans isomerase activity", "id": "GO:0003755", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003755", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VV07", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV07" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 11, "end_pos": 13, "annotation": "n_glycosylation_sequon" }, { "start_pos": 48, "end_pos": 50, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "16237", "name": "", "equation": "[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "16237", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/16237" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1VV07", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV07" }, { "id": "PS50072", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50072" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PPIase cyclophilin-type", "eco_id": "ECO_0000259", "start_pos": 1, "end_pos": 83, "start_aa": "Met", "end_aa": "Glu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 11, "end_pos": 13 }, { "start_pos": 48, "end_pos": 50 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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} ] }, { "name": "DCST1", "type": "synonym", "evidence": [ { "id": "XP_020945397", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020945397" } ] } ], "protein_names": [ { "name": "DC-STAMP domain containing 1", "type": "synonym", "evidence": [ { "id": "A0A4X1VV30", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV30/entry#names_and_taxonomy" } ] }, { "name": "DC-STAMP domain-containing protein 1", "type": "synonym", "evidence": [ { "id": "XP_020945397", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020945397" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VV30", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV30" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DCST1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV30", "locus": { "chromosome": "4", "start_pos": 94748429, "end_pos": 94768452, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000035071", "url": "https://www.ensembl.org/id/ENSSSCG00000035071" } ] } } ], "crossref": [ { "id": "A0A4X1VV30", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VV30", "database": "AlphaFoldDB", "categories": [] }, { "id": "100622304", "url": "https://www.ncbi.nlm.nih.gov/gene/100622304", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001841", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001841", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012858", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012858", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051856", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051856", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR058842", "url": "https://www.ebi.ac.uk/interpro/entry/IPR058842", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100622304", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622304", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1VV30", "url": "https://www.orthodb.org/?gene=A0A4X1VV30", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21041", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21041", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21041:SF17", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21041:SF17", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07782", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07782", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF26037", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF26037", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF26039", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF26039", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020945397", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020945397", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VV30", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV30", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VV30-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV30-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W0Y6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W0Y6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W0Y6-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W0Y6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGVRPDKHRAKGQRRKLPHTTVQSFLSWGLPVSCSRFLWRHQGEFPISAFLLGAGTGGLLAIGLFQLLVNPMNIYEDQKMVTLYSLVGLGAIGWGTSPHIRCASLLLVPKMLGKEGRLFVLGYALAAIYEGPVANLRHNLNEVIASLGCTVELQINNTRAAWRVSTAPLRAVFKDLLSSKESLKAETQNITSSFEELDAQVNSESGYTPEDDAEGSEQTAQGGEPLRMSAFRRRLSTQKIYEMKTKLRCSHVVNKAMLTCRRWFDQKHQQCMRHIWVPLLKHLLCLPMKFKFFCGIAKVMEVWCRSRIPVEGNFGQTYDSLNQSIRGLEGEFSATINLKEEKRAGMLGLNTSWEHVSTEVRDYVRRQEAQLEWALGLLRVLLSCTFLLVLRACFSYVDNYNGDIRFDNIYISTYFCQIDDRRKKLGKRTLLPLRKAEKKTVIFPRDPMIQASEMKNVIRELLETLPVLLLLGVLCGLDGALYSIFDTIRHHSFLQYSFRSSHKLEVKVGGDSMLARLLRKTIGALNTSSETVVESNNMPCLPQPVPLSPSAYVRAALPSGLLVCLCLLQAFGYRLRRVIAAFYFPKREKKRILFLYNDLLRKRVAFTQLRRAAIVRRARQQRAPRRRLADILHRRCPLLRPWLRRRCVVCQASETPESYVCPTPDCEAVYCRSCWNDMRQRCPVCTPREELSSSAYSDSNDDATYAE", "length": 707, "header": "tr|A0A4X1VV30-1|A0A4X1VV30_PIG Isoform 1 of DC-STAMP domain containing 1 OS=Sus scrofa OX=9823 GN=DCST1 PE=4 SV=1 CANONICAL=A0A4X1VV30-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VV30-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV30/entry", "sequence": { "sequence": "MGVRPDKHRAKGQRRKLPHTTVQSFLSWGLPVSCSRFLWRHQGEFPISAFLLGAGTGGLLAIGLFQLLVNPMNIYEDQKMVTLYSLVGLGAIGWGTSPHIRCASLLLVPKMLGKEGRLFVLGYALAAIYEGPVANLRHNLNEVIASLGCTVELQINNTRAAWRVSTAPLRAVFKDLLSSKESLKAETQNITSSFEELDAQVNSESGYTPEDDAEGSEQTAQGGEPLRMSAFRRRLSTQKIYEMKTKLRCSHVVNKAMLTCRRWFDQKHQQCMRHIWVPLLKHLLCLPMKFKFFCGIAKVMEVWCRSRIPVEGNFGQTYDSLNQSIRGLEGEFSATINLKEEKRAGMLGLNTSWEHVSTEVRDYVRRQEAQLEWALGLLRVLLSCTFLLVLRACFSYVDNYNGDIRFDNIYISTYFCQIDDRRKKLGKRTLLPLRKAEKKTVIFPRDPMIQASEMKNVIRELLETLPVLLLLGVLCGLDGALYSIFDTIRHHSFLQYSFRSSHKLEVKVGGDSMLARLLRKTIGALNTSSETVVESNNMPCLPQPVPLSPSAYVRAALPSGLLVCLCLLQAFGYRLRRVIAAFYFPKREKKRILFLYNDLLRKRVAFTQLRRAAIVRRARQQRAPRRRLADILHRRCPLLRPWLRRRCVVCQASETPESYVCPTPDCEAVYCRSCWNDMRQRCPVCTPREELSSSAYSDSNDDATYAE", "length": 707, "header": "tr|A0A4X1VV30-1|A0A4X1VV30_PIG Isoform 1 of DC-STAMP domain containing 1 OS=Sus scrofa OX=9823 GN=DCST1 PE=4 SV=1 CANONICAL=A0A4X1VV30-1" }, "locus": { "chromosome": "4", "start_pos": 94768215, "end_pos": 94748496, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068648.2", "url": "https://www.ensembl.org/id/ENSSSCT00000068648.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072162.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072162.1" } ] } }, { "isoform_ac": "A0A4X1W0Y6-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W0Y6/entry", "sequence": { "sequence": "MGVRPDKHRAKGQRRKLPHTTVQSFLSWGLPVSCSRFLWRHQGEFPISAFLLGAGTGGLLAIGLGAIGWGTSPHIRCASLLLVPKMLGKEGRLFVLGYALAAIYEGPVANLRHNLNEVIASLGCTVELQINNTRAAWRVSTAPLRAVFKDLLSSKESLKAETQNITSSFEELDAQVNSESGYTPEDDAEGSEQTAQGGEPLRMSAFRRRLSTQKIYEMKTKLRCSHVVNKAMLTCRRWFDQKHQQCMRHIWVPLLKHLLCLPMKFKFFCGIAKVMEVWCRSRIPVEGNFGQTYDSLNQSIRGLEGEFSATINLKEEKRAGMLGLNTSWEHVSTEVRDYVRRQEAQLEWALGLLRVLLSCTFLLVLRACFSYVDNYNGDIRFDNIYISTYFCQIDDRRKKLGKRTLLPLRKAEKKTVIFPRDPMIQASEMKNVIRELLETLPVLLLLGVLCGLDGALYSIFDTIRHHSFLQYSFRSSHKLEVKVGGDSMLARLLRKTIGALNTSSETVVESNNMPCLPQPVPLSPSAYVRAALPSGLLVCLCLLQAFGYRLRRVIAAFYFPKREKKRILFLYNDLLRKRVAFTQLRRAAIVRRARQQRAPRRRLADILHRRCPLLRPWLRRRCVVCQASETPESYVCPTPDCEAVYCRSCWNDMRQRCPVCTPREELSSSAYSDSNDDATYAE", "length": 682, "header": "tr|A0A4X1W0Y6-1|A0A4X1VV30_PIG Computationally mapped isoform of DC-STAMP domain containing 1 OS=Sus scrofa OX=9823 GN=DCST1 PE=4 SV=1 CANONICAL=A0A4X1VV30-1" }, "locus": { "chromosome": "4", "start_pos": 94768215, "end_pos": 94748496, "strand": "+", "evidence": [ { "database": "Ensembl 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"count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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{ "id": "A0A5G2QB73", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB73" } ] } ], "protein_names": [ { "name": "Peptidyl-prolyl cis-trans isomerase E", "type": "recommended", "evidence": [ { "id": "A0A5G2QB73", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB73/entry#names_and_taxonomy" } ] }, { "name": "5.2.1.8", "type": "synonym", "evidence": [ { "id": "A0A5G2QB73", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB73/entry#names_and_taxonomy" } ] }, { "name": "PPIase E", "type": "synonym", "evidence": [ { "id": "A0A5G2QB73", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB73/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJY9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJY9#function" }, { "database": "UniProtKB", 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Combines RNA-binding and PPIase activities. Binds mRNA and has a preference for single-stranded RNA molecules with poly-A and poly-U stretches, suggesting it binds to the poly(A)-region in the 3'-UTR of mRNA molecules. Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins. Inhibits KMT2A activity; this requires proline isomerase activity.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJY9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJY9#function" }, { "database": "UniProtKB", "id": "ARBA00058045", "url": "https://www.uniprot.org/uniprotkb/ARBA00058045#function" }, { "database": "UniProtKB", "id": "A0A286ZVZ7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZVZ7#function" }, { "database": "UniProtKB", "id": "A0A8W4FGE8", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGE8#function" }, { "database": "UniProtKB", "id": "A0A8W4FM44", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FM44#function" }, { "database": "UniProtKB", "id": "F1SV03", "url": "https://www.uniprot.org/uniprotkb/F1SV03#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QB73", "url": 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"https://www.ebi.ac.uk/interpro/entry/pfam/PF00160", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6781823", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6781823", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-6782135", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782135", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-6782210", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782210", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-6798695", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798695", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-72163", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72163", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "16237", "url": "https://www.rhea-db.org/rhea/16237", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZJY9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJY9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZJY9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJY9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZVZ7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZVZ7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZVZ7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZVZ7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QB73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB73", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QB73-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB73-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FG47", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FG47", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FG47-1", 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"MRILKKGERSVLRGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEQLDFQSFQNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSEPPKGETQEGEPTAKKARSNPQVYMDIKIGNKPAGRIQILLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQKVIISDCGEYA", "length": 302, "header": "tr|A0A5G2QB73-1|A0A5G2QB73_PIG Isoform 1 of Peptidyl-prolyl cis-trans isomerase E OS=Sus scrofa OX=9823 GN=PPIE PE=1 SV=2 CANONICAL=A0A5G2QB73-1" }, "isoforms": [ { "isoform_ac": "A0A286ZJY9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJY9/entry", "sequence": { "sequence": "MAVLLGLRVGPRDPTITSILPSPLNSQEPLHLLGPGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSEPPKGETQEGEPTAKKARSNPQVYMDIKIGNKPAGRIQILLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQKVIISDCGEYA", "length": 326, "header": "tr|A0A286ZJY9-1|A0A5G2QB73_PIG Computationally mapped isoform of Peptidyl-prolyl cis-trans isomerase E OS=Sus scrofa OX=9823 GN=PPIE PE=1 SV=3 CANONICAL=A0A5G2QB73-1" }, "locus": { "chromosome": "6", "start_pos": 95563474, "end_pos": 95548824, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046673.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046673.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031786.3", "url": "https://www.ensembl.org/id/ENSSSCP00000031786.3" } ] } }, { "isoform_ac": "A0A286ZVZ7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZVZ7/entry", "sequence": { "sequence": "MRILKKGERSVLRGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSEPPKGETQEGEPTAKKARSNPQVYMDIKIGNKPAGRIQILLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEEHGCLLGQTTHIHNFFNLHH", "length": 301, "header": "tr|A0A286ZVZ7-1|A0A5G2QB73_PIG Computationally mapped isoform of Peptidyl-prolyl cis-trans isomerase E OS=Sus scrofa OX=9823 GN=PPIE PE=1 SV=1 CANONICAL=A0A5G2QB73-1" }, "locus": { "chromosome": "6", "start_pos": 95579961, "end_pos": 95549812, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044340.3", "url": "https://www.ensembl.org/id/ENSSSCT00000044340.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035846.1", "url": "https://www.ensembl.org/id/ENSSSCP00000035846.1" } ] } }, { "isoform_ac": "A0A5G2QB73-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB73/entry", "sequence": { "sequence": "MRILKKGERSVLRGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEQLDFQSFQNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSEPPKGETQEGEPTAKKARSNPQVYMDIKIGNKPAGRIQILLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQKVIISDCGEYA", "length": 302, "header": "tr|A0A5G2QB73-1|A0A5G2QB73_PIG Isoform 1 of Peptidyl-prolyl cis-trans 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SV=1 CANONICAL=A0A5G2QB73-1" }, "locus": { "chromosome": "6", "start_pos": 95571528, "end_pos": 95548674, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000104295.1", "url": "https://www.ensembl.org/id/ENSSSCT00000104295.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078310.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078310.1" } ] } }, { "isoform_ac": "A0A8W4FM44-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FM44/entry", "sequence": { "sequence": "MRILKKGERSVLRGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMLDFQSFQNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSEPPKGETQEGEPTAKKARSNPQVYMDIKIGNKPAGRIQILLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQKVIISDCGEYA", "length": 310, "header": "tr|A0A8W4FM44-1|A0A5G2QB73_PIG Computationally mapped isoform of Peptidyl-prolyl cis-trans isomerase E OS=Sus scrofa OX=9823 GN=PPIE PE=1 SV=1 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"chromosome": "6", "start_pos": 95572617, "end_pos": 95548674, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004060.5", "url": "https://www.ensembl.org/id/ENSSSCT00000004060.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000003969.4", "url": "https://www.ensembl.org/id/ENSSSCP00000003969.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJY9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJY9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-6781823", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6781823", "resource": "Reactome", "description": "Formation of TC-NER Pre-Incision Complex" }, { "id": "R-SSC-6782135", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782135", "resource": "Reactome", "description": "Dual incision in TC-NER" }, { "id": "R-SSC-6782210", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782210", "resource": "Reactome", "description": "Gap-filling DNA repair synthesis and ligation in TC-NER" }, { "id": "R-SSC-6798695", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798695", "resource": "Reactome", "description": "Neutrophil degranulation" }, { "id": "R-SSC-72163", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72163", "resource": "Reactome", "description": "mRNA Splicing - Major Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QB73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB73" } ], "pmid": "" }, { "name": "cyclosporin A binding", "id": "GO:0016018", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016018", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QB73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB73" } ], "pmid": "" }, { "name": "peptidyl-prolyl cis-trans isomerase activity", "id": "GO:0003755", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003755", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QB73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB73" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QB73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB73" } ], "pmid": "" }, { "name": "catalytic step 2 spliceosome", "id": "GO:0071013", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071013", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QB73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB73" } ], "pmid": "" }, { "name": "spliceosomal complex", "id": "GO:0005681", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005681", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QB73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB73" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QB73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB73" } ], "pmid": "" }, { "name": "protein-containing complex", "id": "GO:0032991", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032991", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QB73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB73" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "protein folding", "id": "GO:0006457", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006457", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QB73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB73" } ], "pmid": "" }, { "name": "mRNA splicing, via spliceosome", "id": "GO:0000398", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000398", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QB73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB73" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 208, "end_pos": 210, "annotation": "n_glycosylation_sequon" }, { "start_pos": 245, "end_pos": 247, "annotation": "n_glycosylation_sequon" }, { "start_pos": 69, "end_pos": 71, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "16237", "name": "", "equation": "[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "16237", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/16237" } ] }, { "id": "R-SSC-6782004", "name": "Assembly of the pre-incision complex in TC-NER", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6782004", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782004" } ] }, { "id": "R-SSC-6782069", "name": "UVSSA:USP7 deubiquitinates ERCC6", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6782069", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782069" } ] }, { "id": "R-SSC-6782131", "name": "ERCC2-facilitated RNA Pol II backtracking in TC-NER", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6782131", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782131" } ] }, { "id": "R-SSC-6782138", "name": "ERCC5 and RPA bind TC-NER site", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6782138", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782138" } ] }, { "id": "R-SSC-6782141", "name": "Binding of ERCC1:ERCC4 (ERCC1:XPF) to pre-incision complex in TC-NER", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6782141", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782141" } ] }, { "id": "R-SSC-6782204", "name": "5' incision of damaged DNA strand by ERCC1:ERCC4 in TC-NER", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6782204", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782204" } ] }, { "id": "R-SSC-6782208", "name": "Repair DNA synthesis of ~27-30 bases long patch by POLD, POLE or POLK in TC-NER", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6782208", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782208" } ] }, { "id": "R-SSC-6782211", "name": "DNA polymerases delta, epsilon or kappa bind the TC-NER site", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6782211", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782211" } ] }, { "id": "R-SSC-6782224", "name": "3' incision by ERCC5 (XPG) in TC-NER", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6782224", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782224" } ] }, { "id": "R-SSC-6782227", "name": "Ligation of newly synthesized repair patch to incised DNA in TC-NER", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6782227", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782227" } ] }, { "id": "R-SSC-6798748", "name": "Exocytosis of secretory granule lumen proteins", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "extracellular region, secretory granule lumen", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6798748", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798748" } ] }, { "id": "R-SSC-6800434", "name": "Exocytosis of ficolin-rich granule lumen proteins", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "extracellular region, ficolin-1-rich granule lumen", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6800434", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6800434" } ] }, { "id": "R-SSC-9684118", "name": "ERCC3-facilitated RNA Pol II backtracking in TC-NER", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9684118", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9684118" } ] }, { "id": "R-SSC-9770141", "name": "Formation of the Spliceosomal C* complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [ "R-SSC-5688092", "R-SSC-5688093", "R-SSC-72073", "R-SSC-9769591", "R-SSC-9769593", "R-SSC-9769594", "R-SSC-9769596", "R-SSC-9769598", "R-SSC-9769599", "R-SSC-9769601" ], "output_participant_list": [ "R-SSC-72060", "R-SSC-8867898", "R-SSC-9770419", "R-SSC-9770425", "R-SSC-9770427", "R-SSC-9770428", "R-SSC-9770430" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9770141", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9770141" } ] }, { "id": "R-SSC-9770236", "name": "Formation of the Spliceosomal P complex and exon ligation", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [ "R-SSC-9769588", "R-SSC-9769590", "R-SSC-9769602" ], "output_participant_list": [ "R-SSC-6791189", "R-SSC-8849139", "R-SSC-8952113", "R-SSC-9769562" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9770236", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9770236" } ] }, { "id": "R-SSC-9770847", "name": "Spliceosomal P complex dissociates yielding the intron-containing complex (ILS) and the spliced mRNP (new)", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [ "R-SSC-5688097", "R-SSC-8869310", "R-SSC-8869311", "R-SSC-9770846" ], "output_participant_list": [ "R-SSC-3900136", "R-SSC-6814858", "R-SSC-8865888", "R-SSC-8865956", "R-SSC-8952110", "R-SSC-9769561", "R-SSC-8867893", "R-SSC-9769592" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9770847", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9770847" } ] }, { "id": "R-SSC-9794542", "name": "Formation of the Spliceosomal C complex containing intron lariat", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9794542", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9794542" } ] } ], "reaction_participants": [ { "participant_id": "R-SSC-3900136", "participant_name": "DDX5 [nucleoplasm]", "crossref": [ { "id": "ENSSSCP00000043632", "database": "ENSEMBL", "url": "" }, { "id": "87226", "database": "VGNC", "url": "" }, { "id": "A0A287AHW6", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000032092", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000038465", "database": "ENSEMBL", "url": "" } ] }, { "participant_id": "R-SSC-5688092", "participant_name": "DHX8 [nucleoplasm]", "crossref": [ { "id": "F1S1H3", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000017378", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCP00000018412", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000018917", "database": "ENSEMBL", "url": "" }, { "id": "87298", "database": "VGNC", "url": "" } ] }, { "participant_id": "R-SSC-5688093", "participant_name": "PRPF18 [nucleoplasm]", "crossref": [ { "id": "A0A4X1VY37", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000026354", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCP00000027625", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000024330", "database": "ENSEMBL", "url": "" }, { "id": "NP_001231788.1", "database": "RefSeq", "url": "" } ] }, { "participant_id": "R-SSC-5688097", "participant_name": "DHX15 [nucleoplasm]", "crossref": [ { "id": "F1S5A8", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000008756", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCP00000009333", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000009580", "database": "ENSEMBL", "url": "" }, { "id": "87286", "database": "VGNC", "url": "" } ] }, { "participant_id": "R-SSC-6791189", "participant_name": "MTREX [nucleoplasm]", "crossref": [ { "id": "F1SLL6", "database": "UniProt", "url": "" }, { "id": "ENSSSCP00000017920", "database": "ENSEMBL", "url": "" }, { "id": "90470", "database": "VGNC", "url": "" }, { "id": "ENSSSCT00000018417", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCG00000016911", "database": "ENSEMBL", "url": "" } ] }, { "participant_id": "R-SSC-6814858", "participant_name": "SRRT [nucleoplasm]", "crossref": [ { "id": "I3LI05", "database": "UniProt", "url": "" }, { "id": "ENSSSCP00000023704", "database": "ENSEMBL", "url": "" }, { "id": "93471", "database": "VGNC", "url": "" }, { "id": "ENSSSCT00000024767", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCG00000024789", "database": "ENSEMBL", "url": "" } ] }, { "participant_id": "R-SSC-72060", "participant_name": "DHX38 [nucleoplasm]", "crossref": [ { "id": "F1S3A8", "database": "UniProt", "url": "" }, { "id": "XP_020949516.1", "database": "RefSeq", "url": "" }, { "id": "ENSSSCP00000002966", "database": "ENSEMBL", "url": "" }, { "id": "87294", "database": "VGNC", "url": "" }, { "id": "ENSSSCT00000003045", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCG00000002748", "database": "ENSEMBL", "url": "" }, { "id": "XP_020949515.1", "database": "RefSeq", "url": "" } ] }, { "participant_id": "R-SSC-72073", "participant_name": "SLU7 [nucleoplasm]", "crossref": [ { "id": "F1RR54", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000017033", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCP00000018045", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000018545", "database": "ENSEMBL", "url": "" }, { "id": "XP_003134141.1", "database": "RefSeq", "url": "" }, { "id": "93214", "database": "VGNC", "url": "" } ] }, { "participant_id": "R-SSC-8849139", "participant_name": "DDX39B [nucleoplasm]", "crossref": [ { "id": "XP_005665850.1", "database": "RefSeq", "url": "" }, { "id": "ENSSSCP00000001487", "database": "ENSEMBL", "url": "" }, { "id": "NP_001005157.1", "database": "RefSeq", "url": "" }, { "id": "Q29024", "database": "UniProt", "url": "" }, { "id": "ENSSSCT00000001529", "database": "ENSEMBL", "url": "" }, { "id": "XP_005665851.1", "database": "RefSeq", "url": "" }, { "id": "ENSSSCG00000001400", "database": "ENSEMBL", "url": "" } ] }, { "participant_id": "R-SSC-8865888", "participant_name": "SRRM2 [nucleoplasm]", "crossref": [ { "id": "ENSSSCG00000023304", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000051053", "database": "ENSEMBL", "url": "" }, { "id": "93468", "database": "VGNC", "url": "" }, { "id": "ENSSSCP00000041895", "database": "ENSEMBL", "url": "" }, { "id": "A0A287ADD0", "database": "UniProt", "url": "" } ] }, { "participant_id": "R-SSC-8865956", "participant_name": "CWC22 [nucleoplasm]", "crossref": [ { "id": "XP_003133562.2", "database": "RefSeq", "url": "" }, { "id": "XP_013839769.1", "database": "RefSeq", "url": "" }, { "id": "ENSSSCP00000016961", "database": "ENSEMBL", "url": "" }, { "id": "A0A4X1TWU8", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000016008", "database": "ENSEMBL", "url": "" }, { "id": "XP_005672046.1", "database": "RefSeq", "url": "" }, { "id": "ENSSSCT00000017430", "database": "ENSEMBL", "url": "" } ] }, { "participant_id": "R-SSC-8867893", "participant_name": "PPWD1 [nucleoplasm]", "crossref": [ { "id": "ENSSSCP00000017953", "database": "ENSEMBL", "url": "" }, { "id": "NP_001231350.1", "database": "RefSeq", "url": "" }, { "id": "F1SKT8", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000016945", "database": "ENSEMBL", "url": "" }, { "id": "91766", "database": "VGNC", "url": "" }, { "id": "ENSSSCT00000018453", "database": "ENSEMBL", "url": "" } ] }, { "participant_id": "R-SSC-8867898", "participant_name": "CWC25 [nucleoplasm]", "crossref": [ { "id": "ENSSSCT00000053706", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCG00000021478", "database": "ENSEMBL", "url": "" }, { "id": "87096", "database": "VGNC", "url": "" }, { "id": "ENSSSCP00000032040", "database": "ENSEMBL", "url": "" }, { "id": "A0A286ZKR9", "database": "UniProt", "url": "" } ] }, { "participant_id": "R-SSC-8869310", "participant_name": "TFIP11 [nucleoplasm]", "crossref": [ { "id": "Q06AK6", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000009962", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCP00000010632", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000010917", "database": "ENSEMBL", "url": "" }, { "id": "XP_020927865.1", "database": "RefSeq", "url": "" }, { "id": "XP_020927864.1", "database": "RefSeq", "url": "" }, { "id": "NP_001070682.1", "database": "RefSeq", "url": "" } ] }, { "participant_id": "R-SSC-8869311", "participant_name": "GCFC2 [nucleoplasm]", "crossref": [ { "id": "I3LDF5", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000021287", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCP00000022086", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000031635", "database": "ENSEMBL", "url": "" }, { "id": "XP_020942970.1", "database": "RefSeq", "url": "" }, { "id": "88382", "database": "VGNC", "url": "" } ] }, { "participant_id": "R-SSC-8952110", "participant_name": "PPIL3 [nucleoplasm]", "crossref": [ { "id": "XP_013839835.1", "database": "RefSeq", "url": "" }, { "id": "ENSSSCT00000017525", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCG00000016096", "database": "ENSEMBL", "url": "" }, { "id": "XP_001926016.1", "database": "RefSeq", "url": "" }, { "id": "XP_005672124.1", "database": "RefSeq", "url": "" }, { "id": "103073", "database": "VGNC", "url": "" }, { "id": "ENSSSCP00000017053", "database": "ENSEMBL", "url": "" }, { "id": "XP_001925960.1", "database": "RefSeq", "url": "" }, { "id": "F2Z5T7", "database": "UniProt", "url": "" }, { "id": "XP_005672126.1", "database": "RefSeq", "url": "" }, { "id": "XP_005672125.1", "database": "RefSeq", "url": "" } ] }, { "participant_id": "R-SSC-8952113", "participant_name": "PPIL4 [nucleoplasm]", "crossref": [ { "id": "ENSSSCP00000023314", "database": "ENSEMBL", "url": "" }, { "id": "91699", "database": "VGNC", "url": "" }, { "id": "I3LGX0", "database": "UniProt", "url": "" }, { "id": "ENSSSCT00000024741", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCG00000028867", "database": "ENSEMBL", "url": "" } ] }, { "participant_id": "R-SSC-9769561", "participant_name": "CCDC12 [nucleoplasm]", "crossref": [ { "id": "A0A8W4FDT6", "database": "UniProt", "url": "" }, { "id": "ENSSSCP00000077421", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000093297", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCG00000011329", "database": "ENSEMBL", "url": "" } ] }, { "participant_id": "R-SSC-9769562", "participant_name": "PPIL2 [nucleoplasm]", "crossref": [ { "id": "ENSSSCG00000010083", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000056926", "database": "ENSEMBL", "url": "" }, { "id": "91698", "database": "VGNC", "url": "" }, { "id": "ENSSSCP00000040807", "database": "ENSEMBL", "url": "" }, { 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"Protein" ] }, { "id": "A0A8D0TE27", "url": "https://www.uniprot.org/uniprotkb/A0A8D0TE27", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0TE27-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0TE27-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FG57", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FG57", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FG57-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FG57-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGLFGKTQEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDKILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEALEAMQSRLATLRS", "length": 221, "header": "tr|A0A4X1W457-1|A0A4X1W457_PIG Isoform 1 of Charged multivesicular body protein 3 OS=Sus scrofa OX=9823 GN=CHMP3 PE=1 SV=1 CANONICAL=A0A4X1W457-1" }, "isoforms": [ { 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"MRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDKILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEALEAMQSRLATLRS", "length": 195, "header": "tr|A0A5G2QU03-1|A0A4X1W457_PIG Computationally mapped isoform of Charged multivesicular body protein 3 OS=Sus scrofa OX=9823 GN=CHMP3 PE=1 SV=2 CANONICAL=A0A4X1W457-1" }, "locus": { "chromosome": "3", "start_pos": 58278888, "end_pos": 58236943, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071331.2", "url": "https://www.ensembl.org/id/ENSSSCT00000071331.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065475.2", "url": "https://www.ensembl.org/id/ENSSSCP00000065475.2" } ] } }, { "isoform_ac": "A0A8D0TE27-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0TE27/entry", "sequence": { "sequence": "MYVIVPVWVLSGGCCPDWLVVILPLEVVSVGLSSQPDPFFSFWKRVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDKILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEALEAMQSRLATLRS", "length": 251, "header": "tr|A0A8D0TE27-1|A0A4X1W457_PIG Computationally mapped isoform of Charged multivesicular body protein 3 OS=Sus scrofa OX=9823 GN=CHMP3 PE=1 SV=1 CANONICAL=A0A4X1W457-1" }, "locus": { "chromosome": "3", "start_pos": 58278888, "end_pos": 58232479, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081836.1", "url": "https://www.ensembl.org/id/ENSSSCT00000081836.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074378.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074378.1" } ] } }, { "isoform_ac": "A0A8W4FG57-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FG57/entry", "sequence": { "sequence": "MEVLRLGVELELQLPAHATATATLDPSCICSLQLQLVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDKILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEALEAMQSRLATLRS", "length": 242, "header": "tr|A0A8W4FG57-1|A0A4X1W457_PIG Computationally mapped isoform of Charged multivesicular body protein 3 OS=Sus scrofa OX=9823 GN=CHMP3 PE=1 SV=1 CANONICAL=A0A4X1W457-1" }, "locus": { "chromosome": "3", "start_pos": 58278888, "end_pos": 58236424, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000101318.1", "url": "https://www.ensembl.org/id/ENSSSCT00000101318.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078302.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078302.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D0TE27", "url": "https://www.uniprot.org/uniprotkb/A0A8D0TE27" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100522249", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522249", "resource": "KEGG Pathway" }, { "id": "R-SSC-1632852", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1632852", "resource": "Reactome", "description": "Macroautophagy" }, { "id": "R-SSC-5620971", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5620971", "resource": "Reactome", "description": "Pyroptosis" }, { "id": "R-SSC-917729", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-917729", "resource": "Reactome", "description": "Endosomal Sorting Complex Required For Transport (ESCRT)" }, { "id": "R-SSC-9668328", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9668328", "resource": "Reactome", "description": "Sealing of the nuclear envelope (NE) by ESCRT-III" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2MT51-1", "protein_name": "Charged multivesicular body protein 3 isoform X1", "gene_name": "LOC100770826", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGLFGKTQEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGALGKAPSKVTDALPEPEPSGAMAASEEGEDEEDEEDLEAMQSRLATLRS", "length": 224 }, "evidence": [ { "id": "A0A4X1W457", "url": "https://omabrowser.org/oma/group/A0A4X1W457/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P36095-1", "protein_name": "Vacuolar protein-sorting-associated protein 24", "gene_name": "VPS24", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MDYIKKAIWGPDPKEQQRRIRSVLRKNGRNIEKSLRELTVLQNKTQQLIKKSAKKNDVRTVRLYAKELYQINKQYDRMYTSRAQLDSVRMKIDEAIRMNTLSNQMADSAGLMREVNSLVRLPQLRNTMIELEKELMKSGIISEMVDDTMESVGDVGEEMDEAVDEEVNKIVEQYTNEKFKNVDQVPTVELAANEEEQEIPDEKVDEEADRMVNEMRERLRALQN", "length": 224 }, "evidence": [ { "id": "A0A4X1W457", "url": "https://omabrowser.org/oma/group/A0A4X1W457/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q54P63-1", "protein_name": "Charged multivesicular body protein 3", "gene_name": "chmp3", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFSFLKKPTPEELVKKWKRELRREDRGLDTQLRAIDMQEKKTVRMIKERVKAGDQKSAKTLAKEIVNSRKAKERIYTAKAQMNSVSMQLQSNLAMTKVQGNLAKSTEIMKMMNDLIKLPELNKVMMAMGSEMTKAGIMEEMISDVFDMQGEDLEEEAEMEVNKIMDEILVSGPQVSSAPLETHQQEEVVQEKQEDSELLDRLKALKS", "length": 207 }, "evidence": [ { "id": "A0A4X1W457", "url": "https://omabrowser.org/oma/group/A0A4X1W457/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q58CS7-1", "protein_name": "Charged multivesicular body protein 3", "gene_name": "CHMP3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGLFGKTQEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGALGKAPSKVTDALPEPEPLGAMAASEDEEEEEEALEAMQSRLATLRS", "length": 222 }, "evidence": [ { "id": "A0A4X1W457", "url": "https://omabrowser.org/oma/group/A0A4X1W457/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q6NY88-1", "protein_name": "Charged multivesicular body protein 3", "gene_name": "chmp3", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGLFGKTQEKPPKDLINEWSLKIRKEMRVIDRQIRDIQREEEKVKRSIKDAAKKGQKDVCIILAKEMIQSKRAINKLYASKAQMNSVLLSMKNQLSVLRVAGALQKSTEVMKAMQSLVKIPEIQATMRDLSKEMMKAGIIEEMLEDTLEGMDDEEEMEEAAEAEVDKILFEITAGALGKAPSKVTDLPDPVAIGATAAPEEESEEEEEIEEMQSRLAALRS", "length": 221 }, "evidence": [ { "id": "A0A4X1W457", "url": "https://omabrowser.org/oma/group/A0A4X1W457/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8CGS4-1", "protein_name": "Charged multivesicular body protein 3", "gene_name": "Chmp3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGLFGKTQEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKEVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGALGKAPSKVTDALPEPEPAGAMAASEGDEEDDEEDLEAMQSRLATLRS", "length": 223 }, "evidence": [ { "id": "A0A4X1W457", "url": "https://omabrowser.org/oma/group/A0A4X1W457/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9CQ10-1", "protein_name": "Charged multivesicular body protein 3", "gene_name": "Chmp3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLFGKTQEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKEVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGALGKAPSKVTDALPEPEPAGAMAASEEGEEEEDEEDLEAMQSRLATLRS", "length": 224 }, "evidence": [ { "id": "A0A4X1W457", "url": "https://omabrowser.org/oma/group/A0A4X1W457/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9LXH5-1", "protein_name": "Putative vacuolar protein sorting-associated protein 24 homolog 2", "gene_name": "VPS24-2", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MTIKSLLSDIEREERNVHKAIKDSVKRNDLVTAKALAREIVSSRRTVKRLYENKAQVNSISMHLGESIATAVTVGNLSKSGEVMKLVNSLMKAPEIAVTMQAFSKEMTKTGVIEEFVSDAVDNALDSEDIEEEIEEEVDKVLTAIAGETAAELPEAVRKQKMNVPAQKAETLHGEDAIVEGVDAEEELEAIRYRLANVRS", "length": 200 }, "evidence": [ { "id": "A0A4X1W457", "url": "https://omabrowser.org/oma/group/A0A4X1W457/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VN02-1", "protein_name": "Vacuolar protein sorting 24, isoform B", "gene_name": "Vps24", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MGLFGRTPSKDPKEQVQEWTHKIRKEGNQLDRQIRSIQREEEKVKRSLKQAAQKNDRDTCVILAKEIVNARKAINRIYTSKAHLNSIQMQMKNQLSTLRVAGSLQKSTEVLQAMQSLVRYPELAGIMRDMSKEMMKAGIIEEMLDETMDSLEESEELEEEASKEVDKVLWEITDGKLGEAPLPPEATPADKASASAARVEAEQDDEEGEELQEMQSRLASLRS", "length": 223 }, "evidence": [ { "id": "A0A4X1W457", "url": "https://omabrowser.org/oma/group/A0A4X1W457/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y3E7-1", "protein_name": "Charged multivesicular body protein 3", "gene_name": "CHMP3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGLFGKTQEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCIVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEEALEAMQSRLATLRS", "length": 222 }, "evidence": [ { "id": "A0A4X1W457", "url": "https://omabrowser.org/oma/group/A0A4X1W457/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 20, "go_terms": [ { "name": "vacuolar transport", "id": "GO:0007034", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007034", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "plasma membrane repair", "id": "GO:0001778", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001778", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "regulation of centrosome duplication", "id": "GO:0010824", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010824", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "nuclear membrane reassembly", "id": "GO:0031468", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031468", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "viral budding via host ESCRT complex", "id": "GO:0039702", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0039702", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "multivesicular body-lysosome fusion", "id": "GO:0061763", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061763", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "autophagosome maturation", "id": "GO:0097352", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097352", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "regulation of early endosome to late endosome transport", "id": "GO:2000641", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000641", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "suppression of viral release by host", "id": "GO:0044790", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0044790", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "protein transport", "id": "GO:0015031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015031", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "mitotic metaphase chromosome alignment", "id": "GO:0007080", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007080", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "protein polymerization", "id": "GO:0051258", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051258", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "late endosome to lysosome transport", "id": "GO:1902774", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902774", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "regulation of mitotic spindle assembly", "id": "GO:1901673", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901673", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "late endosome to vacuole transport", "id": "GO:0045324", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045324", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "membrane fission", "id": "GO:0090148", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090148", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "endosome transport via multivesicular body sorting pathway", "id": "GO:0032509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032509", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway", "id": "GO:0043162", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043162", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "viral budding from plasma membrane", "id": "GO:0046761", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046761", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "midbody abscission", "id": "GO:0061952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061952", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 9, "go_terms": [ { "name": "ESCRT III complex", "id": "GO:0000815", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000815", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "kinetochore microtubule", "id": "GO:0005828", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005828", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "lysosomal membrane", "id": "GO:0005765", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005765", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "kinetochore", "id": "GO:0000776", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000776", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "midbody", "id": "GO:0030496", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030496", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "multivesicular body", "id": "GO:0005771", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005771", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "multivesicular body membrane", "id": "GO:0032585", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032585", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "amphisome membrane", "id": "GO:1904930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1904930", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "phosphatidylcholine binding", "id": "GO:0031210", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031210", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "ubiquitin-specific protease binding", "id": "GO:1990381", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990381", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" }, { "name": "membrane bending activity", "id": "GO:0180020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0180020", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W457", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W457" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { 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Pathway" ] }, { "id": "LMTYTKQ", "url": "https://omabrowser.org/oma/group/LMTYTKQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QD51", "url": "https://www.orthodb.org/?gene=A0A5G2QD51", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR19957", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19957", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR19957:SF90", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19957:SF90", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05739", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05739", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14523", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14523", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_001926511", "url": 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"UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S3P8-1", "url": "https://www.uniprot.org/uniprotkb/F1S3P8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSYTPGIGGDPAQLAQCISSNIQKITQCSVEIQRTLNQLGTPQDTPELRQQLQQKQQYTNQLAKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVAEFTTSLTNFQKVQRQAAEKEKEFVARVRASSRVSGGFPEETSKERNLVSWESQTQPQVQVQDEEITEDDLRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVESSEVHVQQANQQLSRAADYQRKSRKTLCIIIFILVIGVVIIGFIIWRVKS", "length": 261, "header": "tr|A0A5G2QD51-1|A0A5G2QD51_PIG Isoform 1 of Syntaxin-7 OS=Sus scrofa OX=9823 GN=STX7 PE=1 SV=1 CANONICAL=A0A5G2QD51-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QD51-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD51/entry", "sequence": { "sequence": 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"MSYTPGIGGDPAQLAQCISSNIQKITQCSVEIQRTLNQLGTPQDTPELRQQLQQKQQYTNQLAKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVAEFTTSLTNFQKVQRQAAEKEKEFVARVRASSRVSGGFPEETSKERNLVSWESQTQPQVQVQDEEITEDDLRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIGKLCSLYFVRWKQAPCRLPAAASQARVTPSSLSFGPPTDKTSSLAVSKTHLVFGSYWLK", "length": 262, "header": "tr|A0A5G2R847-1|A0A5G2QD51_PIG Computationally mapped isoform of Syntaxin-7 OS=Sus scrofa OX=9823 GN=STX7 PE=1 SV=1 CANONICAL=A0A5G2QD51-1" }, "locus": { "chromosome": "1", "start_pos": 31228547, "end_pos": 31192459, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082920.2", "url": "https://www.ensembl.org/id/ENSSSCT00000082920.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072493.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072493.1" } ] } }, { "isoform_ac": "A0A5G2R8A0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R8A0/entry", "sequence": { "sequence": "MSYTPGIGGDPAQLAQCISSNIQKITQCSVEIQRTLNQLGTPQDTPELRQQLQQKQQYTNQLAKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVAEFTTSLTNFQKVQRQAAEKEKEFVARVRASSRVSGGFPEETSKERNLVSWESQTQPQVQVQDEEITEDDLRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVESSEVHVQQANQQLSRAADYQVILTICWSPQSF", "length": 243, "header": "tr|A0A5G2R8A0-1|A0A5G2QD51_PIG Computationally mapped isoform of Syntaxin-7 OS=Sus scrofa OX=9823 GN=STX7 PE=1 SV=2 CANONICAL=A0A5G2QD51-1" }, "locus": { "chromosome": "1", "start_pos": 31233225, "end_pos": 31192459, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074966.2", "url": "https://www.ensembl.org/id/ENSSSCT00000074966.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072548.2", "url": "https://www.ensembl.org/id/ENSSSCP00000072548.2" } ] } }, { "isoform_ac": "F1S3P8-1", "url": "https://www.uniprot.org/uniprotkb/F1S3P8/entry", "sequence": { "sequence": "MSYTPGIGGDPAQLAQCISSNIQKITQCSVEIQRTLNQLGTPQDTPELRQQLQQKQQYTNQLAKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVAEFTTSLTNFQKVQRQAAEKEKEFVARVRASSRVSGGFPEETSKERNLVSWESQTQPQVQVQDEEITEDDLRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVESSEVHVQQANQQLSRAADYQKKDSCMLL", "length": 239, "header": "tr|F1S3P8-1|A0A5G2QD51_PIG Computationally mapped isoform of Syntaxin-7 OS=Sus scrofa OX=9823 GN=STX7 PE=1 SV=2 CANONICAL=A0A5G2QD51-1" }, "locus": { "chromosome": "1", "start_pos": 31234795, "end_pos": 31192459, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004629.5", "url": "https://www.ensembl.org/id/ENSSSCT00000004629.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004523.3", "url": "https://www.ensembl.org/id/ENSSSCP00000004523.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R847", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R847" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100153196", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100153196", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "O15400-1", "protein_name": "Syntaxin-7", "gene_name": "STX7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSYTPGVGGDPAQLAQRISSNIQKITQCSVEIQRTLNQLGTPQDSPELRQQLQQKQQYTNQLAKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVAEFTTSLTNFQKVQRQAAEREKEFVARVRASSRVSGSFPEDSSKERNLVSWESQTQPQVQVQDEEITEDDLRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVENAEVHVQQANQQLSRAADYQRKSRKTLCIIILILVIGVAIISLIIWGLNH", "length": 261 }, "evidence": [ { "id": "A0A5G2QD51", "url": "https://omabrowser.org/oma/group/A0A5G2QD51/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "O70257-1", "protein_name": "Syntaxin-7", "gene_name": "Stx7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSYTPGIGGDPAQLAQRISSNIQKITQCSAEIQRTLNQLGTPQDTPELRQQLQQEQQYTNQLAKETDKYIKEFGFLPTTPSEQRQRKIQKDRLVAEFTTALTNFQKVQRQAAEREKEFVARVRASSRVSGGFPEDSSKEKNFVSWESQTQPQVQVQDEEITEDDLRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVESAEVHVQQANQQLSRAANYQRKSRKTLCIIILILVVGIVIIFFIVWGLKG", "length": 261 }, "evidence": [ { "id": "A0A5G2QD51", "url": "https://omabrowser.org/oma/group/A0A5G2QD51/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "O70439-1", "protein_name": "Syntaxin-7", "gene_name": "Stx7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYTPGIGGDSAQLAQRISSNIQKITQCSVEIQRTLNQLGTPQDSPELRQLLQQKQQYTNQLAKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVAEFTTSLTNFQKAQRQAAEREKEFVARVRASSRVSGGFPEDSSKEKNLVSWESQTQPQVQVQDEEITEDDLRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDMIDSIEANVESAEVHVQQANQQLSRAADYQRKSRKTLCIIIFILVVRIVIICLIVWGLKG", "length": 261 }, "evidence": [ { "id": "A0A5G2QD51", "url": "https://omabrowser.org/oma/group/A0A5G2QD51/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P93654-1", "protein_name": "Syntaxin-22", "gene_name": "SYP22", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSFQDLESGRGRSTRKFNGGRQDSTQAVASGIFQINTGVSTFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSAKLKEASETDHQSGVNPSKKIADAKLARDFQAVLKEFQKAQQTAAERETTYTPFVPQSALPSSYTAGEVDKVPEQRAQLQESKRQELVLLDNEIAFNEAVIEEREQGIQEIHQQIGEVNEIFKDLAVLVNDQGVMIDDIGTHIDNSRAATSQGKSQLVQAAKTQKSNSSLTCLLLVIFGIVLLIVIIVLAA", "length": 268 }, "evidence": [ { "id": "A0A5G2QD51", "url": "https://omabrowser.org/oma/group/A0A5G2QD51/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3ZBT5-1", "protein_name": "Syntaxin-7", "gene_name": "STX7", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSYTPGVGGDPAQLAQRISSNIQKITQCSAEIQRTLNQLGTPQDSPELRQQLQQKQQYTNQLAKETDKYIKEFGSLPTTPSDQRQRKIQKDRLVAEFTASLTNFQKVQRQAAEREKEFVARVRASSRVSGGFPEESSKERNLVSWESQTQPQAQLQDEEITEDDLRLIQERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVENAEVHVQQANQQLSRAADYQRKSRKTLCIIIFILVIGVVIIGLIIWGVKG", "length": 261 }, "evidence": [ { "id": "A0A5G2QD51", "url": "https://omabrowser.org/oma/group/A0A5G2QD51/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q54JY7-1", "protein_name": "Syntaxin-7A", "gene_name": "syn7A", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYNNNNNFGGGGYNQGGGYNSGGYNNNGGGYNNNNGGYNNNNNNNGGYNNNRPQQQQQQQQQYVNNNNNSFDNNGYGGDDDVTNNSDYQSTTRNIQQIQNAVQILTKLVQLLGTPKDSMDTREKIRNCVDSTTHLISSESGKVKNLTSLASRSRDSKNKLLYQKLVKEFNNCLQQFKDIAQVATKKEKTTPLPVAPDHQQPTTFGRNNNSNNNNQNNHFLNNQQPYYDDDNREDEHQSLMESSRRQQLAQIEAEREYQNSIIQERDEGIRKIEQSIVEINEIFVDLSGLVAEQGVMINTIEASLESTTINTKEGVNHLREASKNQKSSRNKMCWIVLILLIVCAVLGVILFFTLRK", "length": 356 }, "evidence": [ { "id": "A0A5G2QD51", "url": "https://omabrowser.org/oma/group/A0A5G2QD51/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "chloride channel inhibitor activity", "id": "GO:0019869", "url": 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of cytoplasm", "id": "GO:0048471", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048471", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD51", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD51" } ], "pmid": "" }, { "name": "recycling endosome", "id": "GO:0055037", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055037", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD51", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD51" } ], "pmid": "" }, { "name": "early endosome membrane", "id": "GO:0031901", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031901", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD51", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD51" } ], "pmid": "" }, { "name": "tertiary granule", "id": "GO:0070820", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070820", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD51", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD51" } ], "pmid": "" }, { "name": "late endosome", "id": "GO:0005770", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005770", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD51", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD51" } ], "pmid": "" }, { "name": "endocytic vesicle", "id": "GO:0030139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030139", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD51", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD51" } ], "pmid": "" }, { "name": "azurophil granule", "id": "GO:0042582", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042582", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD51", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD51" } ], "pmid": "" }, { "name": "immunological synapse", "id": "GO:0001772", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001772", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD51", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD51" } ], "pmid": "" }, { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD51", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD51" } ], "pmid": "" }, { "name": "synaptic vesicle", "id": "GO:0008021", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008021", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD51", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD51" } ], "pmid": "" }, { "name": "SNARE complex", "id": "GO:0031201", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031201", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD51", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD51" } ], "pmid": "" }, { "name": "secretory vesicle", "id": "GO:0099503", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099503", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD51", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD51" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 7, "go_terms": [ { "name": "positive regulation of T cell mediated cytotoxicity", "id": "GO:0001916", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001916", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD51", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD51" } ], "pmid": "" }, { "name": "vesicle-mediated transport", "id": "GO:0016192", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016192", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD51", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD51" } ], "pmid": "" }, { "name": "regulation of protein localization to plasma membrane", "id": "GO:1903076", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1903076", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD51", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD51" } ], "pmid": "" }, { "name": "positive regulation of receptor localization to synapse", "id": "GO:1902685", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902685", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD51", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD51" } ], "pmid": "" }, { "name": "intracellular protein transport", "id": "GO:0006886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006886", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD51", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD51" } ], "pmid": "" }, { "name": "vesicle fusion", "id": "GO:0006906", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006906", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD51", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD51" } ], "pmid": "" }, { "name": "vesicle docking", "id": "GO:0048278", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048278", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD51", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD51" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { 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"database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR013130", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013130", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR028939", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028939", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036291", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036291", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051267", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051267", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100623287", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623287", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HPYVKNQ", "url": "https://omabrowser.org/oma/group/HPYVKNQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1S336", "url": 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] }, { "id": "A0A5G2Q8U7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q8U7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R1Y6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1Y6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R1Y6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1Y6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RMG3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RMG3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RMG3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RMG3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S336", "url": "https://www.uniprot.org/uniprotkb/F1S336", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S336-1", "url": "https://www.uniprot.org/uniprotkb/F1S336-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MESISMMGSPKSLSETFLPNGINGIKDARKVTVGVIGSGDFAKSLTIRLIRCGYHVVIGSRNPKFASEFFPHVVDVTHHEDALIKTNIIFVAIHREHYTSLWDLRHLLVGKILIDVSNNMRINQYPESNAEYLASLFPDSLIVKGFNVVSAWALQLGPKDASRQVYICSNNIQARQQVIELARQLNFIPVDLGSLSSAREIENLPLRLFTLWRGPVVVAISLATFFFLYSFVRDVIHPYARNQQSDFYKIPIEIVNKTLPIVAITLLSLVYLAGLLAAAYQLYYGTKYRRFPPWLETWLQCRKQLGLLSFFFASVHVAYSLCLPMRRSERYLFLNMAYQQVHANIENSWNEEEVWRIEMYISFGIMSLGLLSLLAVTSIPSVSNALNWREFSFIQSTLGYVALLISTFHVLIYGWKRAFEEEYYRFYTPPNFVLALVLPSIVILGLLELCRYPA", "length": 454, "header": "tr|A0A5G2Q8U7-1|A0A5G2Q8U7_PIG Isoform 1 of Cilia and flagella associated protein 69 OS=Sus scrofa OX=9823 GN=STEAP2 PE=3 SV=1 CANONICAL=A0A5G2Q8U7-1" }, "isoforms": [ { "isoform_ac": "A0A5G2Q8U7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U7/entry", "sequence": { "sequence": "MESISMMGSPKSLSETFLPNGINGIKDARKVTVGVIGSGDFAKSLTIRLIRCGYHVVIGSRNPKFASEFFPHVVDVTHHEDALIKTNIIFVAIHREHYTSLWDLRHLLVGKILIDVSNNMRINQYPESNAEYLASLFPDSLIVKGFNVVSAWALQLGPKDASRQVYICSNNIQARQQVIELARQLNFIPVDLGSLSSAREIENLPLRLFTLWRGPVVVAISLATFFFLYSFVRDVIHPYARNQQSDFYKIPIEIVNKTLPIVAITLLSLVYLAGLLAAAYQLYYGTKYRRFPPWLETWLQCRKQLGLLSFFFASVHVAYSLCLPMRRSERYLFLNMAYQQVHANIENSWNEEEVWRIEMYISFGIMSLGLLSLLAVTSIPSVSNALNWREFSFIQSTLGYVALLISTFHVLIYGWKRAFEEEYYRFYTPPNFVLALVLPSIVILGLLELCRYPA", "length": 454, "header": "tr|A0A5G2Q8U7-1|A0A5G2Q8U7_PIG Isoform 1 of Cilia and flagella associated protein 69 OS=Sus scrofa OX=9823 GN=STEAP2 PE=3 SV=1 CANONICAL=A0A5G2Q8U7-1" }, "locus": { "chromosome": "9", "start_pos": 70364963, "end_pos": 70349432, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075589.2", "url": "https://www.ensembl.org/id/ENSSSCT00000075589.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060331.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060331.1" } ] } }, { "isoform_ac": "A0A5G2R1Y6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1Y6/entry", "sequence": { "sequence": "MESISMMGSPKSLSETFLPNGINGIKDARKVTVGVIGSGDFAKSLTIRLIRCGYHVVIGSRNPKFASEFFPHVVDVTHHEDALIKTNIIFVAIHREHYTSLWDLRHLLVGKILIDVSNNMRINQYPESNAEYLASLFPDSLIVKGFNVVSAWALQLGPKDASRQVYICSNNIQARQQVIELARQLNFIPVDLGSLSSAREIENLPLRLFTLWRGPVVVAISLATFFFLYSFVRDVIHPYARNQQSDFYKIPIEIVNKTLPIVAITLLSLVYLAGLLAAAYQLYYGTKYRRFPPWLETWLQCRKQLGLLSFFFASVHVAYSLCLPMRRSERYLFLNMAYQQVHANIENSWNEEEVWRIEMYISFGIMSLGLLSLLAVTSIPSVSNALNWREFSFIQVFSFAGIQPEQGLEVFSQCLVTLL", "length": 419, "header": "tr|A0A5G2R1Y6-1|A0A5G2Q8U7_PIG Computationally mapped isoform of Cilia and flagella associated protein 69 OS=Sus scrofa OX=9823 GN=STEAP2 PE=3 SV=1 CANONICAL=A0A5G2Q8U7-1" }, "locus": { "chromosome": "9", "start_pos": 70365009, "end_pos": 70349432, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000086005.2", "url": "https://www.ensembl.org/id/ENSSSCT00000086005.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068202.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068202.1" } ] } }, { "isoform_ac": "A0A5G2RMG3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RMG3/entry", "sequence": { "sequence": "MESISMMGSPKSLSETFLPNGINGIKDARKVTVGVIGSGDFAKSLTIRLIRCGYHVVIGSRNPKFASEFFPHVVDVTHHEDALIKTNIIFVAIHREHYTSLWDLRHLLVGKILIDVSNNMRINQYPESNAEYLASLFPDSLIVKGFNVVSAWALQLGPKDASRQVYICSNNIQARQQVIELARQLNFIPVDLGSLSSAREIENLPLRLFTLWRGPVVVAISLATFFFLYSFVRDVIHPYARNQQSDFYKIPIEIVNKTLPIVAITLLSLVYLAGLLAAAYQLYYGTKYRRFPPWLETWLQCRKQLGLLSFFFASVHVAYSLCLPMRRSERYLFLNMAYQQVHANIENSWNEEEVWRIEMYISFGIMSLGLLSLLAVTSIPSVSNALNWREFSFIQPEAAWSQ", "length": 402, "header": "tr|A0A5G2RMG3-1|A0A5G2Q8U7_PIG Computationally mapped isoform of Cilia and flagella associated protein 69 OS=Sus scrofa OX=9823 GN=STEAP2 PE=3 SV=1 CANONICAL=A0A5G2Q8U7-1" }, "locus": { "chromosome": "9", "start_pos": 70366767, "end_pos": 70349432, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069794.2", "url": "https://www.ensembl.org/id/ENSSSCT00000069794.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073774.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073774.1" } ] } }, { "isoform_ac": "F1S336-1", "url": "https://www.uniprot.org/uniprotkb/F1S336/entry", "sequence": { "sequence": "MESISMMGSPKSLSETFLPNGINGIKDARKVTVGVIGSGDFAKSLTIRLIRCGYHVVIGSRNPKFASEFFPHVVDVTHHEDALIKTNIIFVAIHREHYTSLWDLRHLLVGKILIDVSNNMRINQYPESNAEYLASLFPDSLIVKGFNVVSAWALQLGPKDASRQVYICSNNIQARQQVIELARQLNFIPVDLGSLSSAREIENLPLRLFTLWRGPVVVAISLATFFFLYSFVRDVIHPYARNQQSDFYKIPIEIVNKTLPIVAITLLSLVYLAGLLAAAYQLYYGTKYRRFPPWLETWLQCRKQLGLLSFFFASVHVAYSLCLPMRRSERYLFLNMAYQQVHANIENSWNEEEVWRIEMYISFGIMSLGLLSLLAVTSIPSVSNALNWREFSFIQSTLGYVALLISTFHVLIYGWKRAFEEEYYRFYTPPNFVLALVLPSIVILGKIILLLPCISRKLKRIKKGWEKNQFLEEGFGGAVPHLSPERVTVM", "length": 490, "header": "tr|F1S336-1|A0A5G2Q8U7_PIG Computationally mapped isoform of Cilia and flagella associated protein 69 OS=Sus scrofa OX=9823 GN=STEAP2 PE=3 SV=1 CANONICAL=A0A5G2Q8U7-1" }, "locus": { "chromosome": "9", "start_pos": 70359343, "end_pos": 70349432, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016673.5", "url": "https://www.ensembl.org/id/ENSSSCT00000016673.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016227.2", "url": "https://www.ensembl.org/id/ENSSSCP00000016227.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S336", "url": "https://www.uniprot.org/uniprotkb/F1S336" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100623287", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623287", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "E1BTX2-1", "protein_name": "STEAP2 metalloreductase", "gene_name": "STEAP2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MESISMMGSPKNLNETFLPNVANGIKDASKITVGIIGSGDFAKSLTIRLIRCGYHVVVGSRNPKLAAEFFPHVVDVTHHEDAVTKTNIIFVAIHREHYTSLWDLKHLLVGKILVDVSNNTRVDQYPDSNAEYLASLFPDSLVVKGFNVVSAWSLQLGPKDASRQVYICSNNVQARHQVTELARQLGFIPVDLGALSSSREIENLPLRLFTLWKGPVVIAISLATFFFIYSFVRDVIHPYMRNQQSDFYKIPIEIVNKTLPIVAITLLSLVYLSGLIAAAYQLYYGTKYRRFPPWLDNWLQCRKQLGLLSFFFAVVHVAYSLCLPMRRSERYLFLNMAYQQVHANVENSWNEEEVWRIEMYISFGIMSLGLLSLLAVTSIPSVNSALNWREFSFIQSTLGYVALLISTFHVLIYGWKRAFEEEYYRFYTPPNFVLALVLPSIVILGKIIFLLPCVSRKLRRIRRGWEKSHAIEETSGSVPHFSPERITVM", "length": 489 }, "evidence": [ { "id": "A0A5G2Q8U7", "url": "https://omabrowser.org/oma/group/A0A5G2Q8U7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3HL79-1", "protein_name": "Metalloreductase STEAP2", "gene_name": "Steap2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MESISMMGSPKSLETFLPNGINGIKDARKVTVGVIGSGDFAKSLTIRLIRCGYHVVIGSRNPKFASEFFPHVVDVTHHEDALTKTNIIFVAIHREHYTSLWDLRHLLVGKILIDVSNNMKVNQYPESNAEYLASLFPDSLIVKGFNVISAWALQLGPKDASRQVYICSNNIQARQQVIELARQLNFIPVDLGSLSSAKEIENLPLRLFTLWRGPVVVAISLAIFFFLYSFVRDVIHPYARNQQSDFYKIPIEIVNKTLPIVAITLLSLVYLAGLLAAAYQLYYGTKYRKFPPWLDTWLQCRKQLGLLGFFFAVVHVAYSLCLPMRRSERYLFLNMAYQQVHANIENAWNEEEVWRIEMYISFGIMSLGLLSLLAVTSIPSVSNALNWREFSFIQSTLGYVALLISTFHVLIYGWKRAFAEEYYRFYTPPNFVLALVLPSIVILGKMILLLPCINRKLKRIKKGWEKSQFLEEGMGGTVPHLSPERVTVM", "length": 489 }, "evidence": [ { "id": "A0A5G2Q8U7", "url": "https://omabrowser.org/oma/group/A0A5G2Q8U7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8BWB6-1", "protein_name": "Metalloreductase STEAP2", "gene_name": "Steap2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESISMMGSPKSLETFLPNGINGIKDARQVTVGVIGSGDFAKSLTIRLIRCGYHVVIGSRNPKFASEFFPHVVDVTHHEDALTKTNIIFVAIHREHYTSLWDLRHLLVGKILIDVSNNMRVNQYPESNAEYLASLFPDSLIVKGFNVISAWALQLGPKDASRQVYICSNNIQARQQVIELARQLNFIPVDLGSLSSAKEIENLPLRLFTLWRGPVVVAISLATFFFLYSFVRDVIHPYARNQQSDFYKIPIEIVNKTLPIVAITLLSLVYLAGLLAAAYQLYYGTKYRRFPPWLDTWLQCRKQLGLLSFFFAVVHVAYSLCLPMRRSERYLFLNMAYQQVHANIENAWNEEEVWRIEMYISFGIMSLGLLSLLAVTSIPSVSNALNWREFSFIQSTLGYVALLITTFHVLIYGWKRAFAEEYYRFYTPPNFVLALVLPSIVILGKMILLLPCISRKLKRIKKGWEKSQFLDEGMGGAVPHLSPERVTVM", "length": 489 }, "evidence": [ { "id": "A0A5G2Q8U7", "url": "https://omabrowser.org/oma/group/A0A5G2Q8U7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8NFT2-1", "protein_name": "Metalloreductase STEAP2", "gene_name": "STEAP2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MESISMMGSPKSLSETFLPNGINGIKDARKVTVGVIGSGDFAKSLTIRLIRCGYHVVIGSRNPKFASEFFPHVVDVTHHEDALTKTNIIFVAIHREHYTSLWDLRHLLVGKILIDVSNNMRINQYPESNAEYLASLFPDSLIVKGFNVVSAWALQLGPKDASRQVYICSNNIQARQQVIELARQLNFIPIDLGSLSSAREIENLPLRLFTLWRGPVVVAISLATFFFLYSFVRDVIHPYARNQQSDFYKIPIEIVNKTLPIVAITLLSLVYLAGLLAAAYQLYYGTKYRRFPPWLETWLQCRKQLGLLSFFFAMVHVAYSLCLPMRRSERYLFLNMAYQQVHANIENSWNEEEVWRIEMYISFGIMSLGLLSLLAVTSIPSVSNALNWREFSFIQSTLGYVALLISTFHVLIYGWKRAFEEEYYRFYTPPNFVLALVLPSIVILGKIILFLPCISRKLKRIKKGWEKSQFLEEGMGGTIPHVSPERVTVM", "length": 490 }, "evidence": [ { "id": "A0A5G2Q8U7", "url": "https://omabrowser.org/oma/group/A0A5G2Q8U7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U7" } ], "pmid": "" }, { "name": "oxidoreductase activity", "id": "GO:0016491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016491", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U7" } ], "pmid": "" }, { "name": "cupric reductase (NADH) activity", "id": "GO:0008823", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008823", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U7" } ], "pmid": "" }, { "name": "ferric-chelate reductase (NADPH) activity", "id": "GO:0052851", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0052851", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 7, "go_terms": [ { "name": "endosome membrane", "id": "GO:0010008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010008", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U7" } ], "pmid": "" }, { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U7" } ], "pmid": "" }, { "name": "endosome", "id": "GO:0005768", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005768", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U7" } ], "pmid": "" }, { "name": "early endosome", "id": "GO:0005769", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005769", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U7" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U7", "url": 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"UniProtKB", "id": "A0A5G2Q8U7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U7" } ], "pmid": "" }, { "name": "regulated exocytosis", "id": "GO:0045055", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045055", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U7" } ], "pmid": "" }, { "name": "response to hormone", "id": "GO:0009725", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009725", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U7" } ], "pmid": "" }, { "name": "copper ion import", "id": "GO:0015677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015677", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U7" } ], "pmid": "" }, { "name": "Golgi to plasma membrane transport", "id": "GO:0006893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006893", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 256, "end_pos": 258, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "71767", "name": "", "equation": "2 Fe(2+) + NADP(+) + H(+) = 2 Fe(3+) + NADPH", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "71767", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/71767" } ] }, { "id": "71771", "name": "", "equation": "2 Cu(+) + NADP(+) + H(+) = 2 Cu(2+) + NADPH", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "71771", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/71771" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { 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}, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QES1-1", "uniprot_ac": "A0A5G2QES1", "uniprot_id": "A0A5G2QES1_PIG", "mass": { "chemical_mass": 102786.0, "monoisotopic_mass": 102786.0 }, "refseq": {}, "gene_names": [ { "name": "NPEPPS", "type": "recommended", "evidence": [ { "id": "A0A5G2QES1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QES1" } ] } ], "protein_names": [ { "name": "Aminopeptidase", "type": "recommended", "evidence": [ { "id": "A0A5G2QES1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QES1/entry#names_and_taxonomy" } ] }, { "name": "3.4.11.-", "type": "synonym", "evidence": [ { "id": "A0A5G2QES1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QES1/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QES1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QES1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NPEPPS", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QES1", "locus": { "chromosome": "12", "start_pos": 23892051, "end_pos": 23799425, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000017513", "url": "https://www.ensembl.org/id/ENSSSCG00000017513" } ] } } ], "crossref": [ { "id": "A0A5G2QES1", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QES1", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000017513", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000017513", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd09601", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd09601", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001930", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001930", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014782", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014782", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR024571", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024571", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027268", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027268", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR034016", "url": "https://www.ebi.ac.uk/interpro/entry/IPR034016", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042097", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042097", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045357", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045357", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050344", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050344", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR11533", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11533", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11533:SF174", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11533:SF174", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01433", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01433", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF11838", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF11838", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF17900", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17900", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-983168", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983168", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QES1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QES1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QES1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QES1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R745", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R745", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R745-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R745-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RND7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RND7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RND7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RND7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RWJ6", "url": "https://www.uniprot.org/uniprotkb/F1RWJ6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RWJ6-1", "url": "https://www.uniprot.org/uniprotkb/F1RWJ6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDCSPTFCFPGFGNPFTIFRSRSSRRRRRLHSLGLAAMPEKRPFERLPADVSPINYSLCLKPDLLDFTFEGKLEAAAQVRQATNQIVMNCADIDIITASYVPEGDEEIHATGFNYQNEDEKVTLSFPSTLQPGTGTLKIDFVGELNDKMKGFYRSKYTTPSGEVRYAAVTQFEATDARRAFPCWDEPAIKATFDISLVVPKDRVALSNMNVIDRKPYPDDENVVEVKFARTPVMSTYLVAFVVGEYDFVETRSKDGVCVRVYTPVGKAEQGKFALEVAAKTLPFYKDYFNVPYPLPKIDLIAIADFAAGAMENWGLVTYRETALLIDPKNSCSSSRQWVALVVGHELAHQWFGNLVTMEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVSADYTRAQELDALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHDYIGDKDFKKGMNMYLTKFQQKNAATEDLWECLENASGKPIAAVMNTWTKQMGFPLIYVEAEQVEDDRLLRLSQRKFCASGPYVGEDCPQWMVPITISTSEDPNQAKLKILMDKPEMNVVLKDVKPDQWVKLNLGTVGFYRTQYSSAMLESLLPGIRDLSLPPVDRLGLQNDLFSLARAGIISTVEVLKVMEAFVNEPNYTVWSDLSCNLGILSTLLSHTDFYEEIQEFVKDVFSPIGERLGWDPKPGEGHLDALLRGLVLGKLGKAGHKATLEEARRRFKDHVEGKQILSADLRSPVYLTVLKHGDGTTLDIMLKLHKQADMQEEKNRIERVLGATLSPELIQKVLTFALSEEVRPQDTVSVIGGVAGGSKHGRKAAWKFIKDNWEELYNRYQGGFLISRLIKLSVEGFAVDKMAGEVKAFFESHPAPSAERTIQQCCENILLNAAWLKRDAESIHQYLLQRKASPPTA", "length": 912, "header": "tr|A0A5G2QES1-1|A0A5G2QES1_PIG Isoform 1 of Aminopeptidase OS=Sus scrofa OX=9823 GN=NPEPPS PE=1 SV=1 CANONICAL=A0A5G2QES1-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QES1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QES1/entry", "sequence": { "sequence": "MDCSPTFCFPGFGNPFTIFRSRSSRRRRRLHSLGLAAMPEKRPFERLPADVSPINYSLCLKPDLLDFTFEGKLEAAAQVRQATNQIVMNCADIDIITASYVPEGDEEIHATGFNYQNEDEKVTLSFPSTLQPGTGTLKIDFVGELNDKMKGFYRSKYTTPSGEVRYAAVTQFEATDARRAFPCWDEPAIKATFDISLVVPKDRVALSNMNVIDRKPYPDDENVVEVKFARTPVMSTYLVAFVVGEYDFVETRSKDGVCVRVYTPVGKAEQGKFALEVAAKTLPFYKDYFNVPYPLPKIDLIAIADFAAGAMENWGLVTYRETALLIDPKNSCSSSRQWVALVVGHELAHQWFGNLVTMEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVSADYTRAQELDALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHDYIGDKDFKKGMNMYLTKFQQKNAATEDLWECLENASGKPIAAVMNTWTKQMGFPLIYVEAEQVEDDRLLRLSQRKFCASGPYVGEDCPQWMVPITISTSEDPNQAKLKILMDKPEMNVVLKDVKPDQWVKLNLGTVGFYRTQYSSAMLESLLPGIRDLSLPPVDRLGLQNDLFSLARAGIISTVEVLKVMEAFVNEPNYTVWSDLSCNLGILSTLLSHTDFYEEIQEFVKDVFSPIGERLGWDPKPGEGHLDALLRGLVLGKLGKAGHKATLEEARRRFKDHVEGKQILSADLRSPVYLTVLKHGDGTTLDIMLKLHKQADMQEEKNRIERVLGATLSPELIQKVLTFALSEEVRPQDTVSVIGGVAGGSKHGRKAAWKFIKDNWEELYNRYQGGFLISRLIKLSVEGFAVDKMAGEVKAFFESHPAPSAERTIQQCCENILLNAAWLKRDAESIHQYLLQRKASPPTA", "length": 912, "header": "tr|A0A5G2QES1-1|A0A5G2QES1_PIG Isoform 1 of Aminopeptidase OS=Sus scrofa OX=9823 GN=NPEPPS PE=1 SV=1 CANONICAL=A0A5G2QES1-1" }, "locus": { "chromosome": "12", "start_pos": 23890696, "end_pos": 23799501, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067690.2", "url": "https://www.ensembl.org/id/ENSSSCT00000067690.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060526.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060526.1" } ] } }, { "isoform_ac": "A0A5G2R745-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R745/entry", "sequence": { "sequence": "MSPPLTTAFASSPTCWTSPSRASWRPPPSFKKWKKINFCSTSSLIHSYKQVRQATNQIVMNCADIDIITASYVPEGDEEIHATGFNYQNEDEKVTLSFPSTLQPGTGTLKIDFVGELNDKMKGFYRSKYTTPSGEVRYAAVTQFEATDARRAFPCWDEPAIKATFDISLVVPKDRVALSNMNVIDRKPYPDDENVVEVKFARTPVMSTYLVAFVVGEYDFVETRSKDGVCVRVYTPVGKAEQGKFALEVAAKTLPFYKDYFNVPYPLPKIDLIAIADFAAGAMENWGLVTYRETALLIDPKNSCSSSRQWVALVVGHELAHQWFGNLVTMEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVSADYTRAQELDALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHDYIGDKDFKKGMNMYLTKFQQKNAATEDLWECLENASGKPIAAVMNTWTKQMGFPLIYVEAEQVEDDRLLRLSQRKFCASGPYVGEDCPQWMVPITISTSEDPNQAKLKILMDKPEMNVVLKDVKPDQWVKLNLGTVGFYRTQYSSAMLESLLPGIRDLSLPPVDRLGLQNDLFSLARAGIISTVEVLKVMEAFVNEPNYTVWSDLSCNLGILSTLLSHTDFYEEIQEFVKDVFSPIGERLGWDPKPGEGHLDALLRGLVLGKLGKAGHKATLEEARRRFKDHVEGKQILSADLRSPVYLTVLKHGDGTTLDIMLKLHKQADMQEEKNRIERVLGATLSPELIQKVLTFALSEEVRPQDTVSVIGGVAGGSKHGRKAAWKFIKDNWEELYNRYQGGFLISRLIKLSVEGFAVDKMAGEVKAFFESHPAPSAERTIQQCCENILLNAAWLKRDAESIHQYLLQRKASPPTA", "length": 884, "header": "tr|A0A5G2R745-1|A0A5G2QES1_PIG Computationally mapped isoform of Aminopeptidase OS=Sus scrofa OX=9823 GN=NPEPPS PE=1 SV=2 CANONICAL=A0A5G2QES1-1" }, "locus": { "chromosome": "12", "start_pos": 23890696, "end_pos": 23805262, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090898.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090898.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069952.2", "url": "https://www.ensembl.org/id/ENSSSCP00000069952.2" } ] } }, { "isoform_ac": "A0A5G2RND7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RND7/entry", "sequence": { "sequence": "MASATYGLLSDVLFSGFWEPLHHLPQVRQATNQIVMNCADIDIITASYVPEGDEEIHATGFNYQNEDEKVTLSFPSTLQPGTGTLKIDFVGELNDKMKGFYRSKYTTPSGEVRYAAVTQFEATDARRAFPCWDEPAIKATFDISLVVPKDRVALSNMNVIDRKPYPDDENVVEVKFARTPVMSTYLVAFVVGEYDFVETRSKDGVCVRVYTPVGKAEQGKFALEVAAKTLPFYKDYFNVPYPLPKIDLIAIADFAAGAMENWGLVTYRETALLIDPKNSCSSSRQWVALVVGHELAHQWFGNLVTMEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVSADYTRAQELDALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHDYIGDKDFKKGMNMYLTKFQQKNAATEDLWECLENASGKPIAAVMNTWTKQMGFPLIYVEAEQVEDDRLLRLSQRKFCASGPYVGEDCPQWMVPITISTSEDPNQAKLKILMDKPEMNVVLKDVKPDQWVKLNLGTVGFYRTQYSSAMLESLLPGIRDLSLPPVDRLGLQNDLFSLARAGIISTVEVLKVMEAFVNEPNYTVWSDLSCNLGILSTLLSHTDFYEEIQEFVKDVFSPIGERLGWDPKPGEGHLDALLRGLVLGKLGKAGHKATLEEARRRFKDHVEGKQILSADLRSPVYLTVLKHGDGTTLDIMLKLHKQADMQEEKNRIERVLGATLSPELIQKVLTFALSEEVRPQDTVSVIGGVAGGSKHGRKAAWKFIKDNWEELYNRYQGGFLISRLIKLSVEGFAVDKMAGEVKAFFESHPAPSAERTIQQCCENILLNAAWLKRDAESIHQYLLQRKASPPTA", "length": 860, "header": "tr|A0A5G2RND7-1|A0A5G2QES1_PIG Computationally mapped isoform of Aminopeptidase OS=Sus scrofa OX=9823 GN=NPEPPS PE=1 SV=1 CANONICAL=A0A5G2QES1-1" }, "locus": { "chromosome": "12", "start_pos": 23890696, "end_pos": 23799485, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072974.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072974.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074345.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074345.1" } ] } }, { "isoform_ac": "F1RWJ6-1", "url": "https://www.uniprot.org/uniprotkb/F1RWJ6/entry", "sequence": { "sequence": "MWLAAAAPSLARRLLFLGPPPPPLLLLLLSRSSRRRRRLHSLGLAAMPEKRPFERLPADVSPINYSLCLKPDLLDFTFEGKLEAAAQVRQATNQIVMNCADIDIITASYVPEGDEGFLTPLGGTRWLEGLELRISFTPEIHATGFNYQNEDEKVTLSFPSTLQPGTGTLKIDFVGELNDKMKGFYRSKYTTPSGEVRYAAVTQFEATDARRAFPCWDEPAIKATFDISLVVPKDRVALSNMNVIDRKPYPDDENVVEVKFARTPVMSTYLVAFVVGEYDFVETRSKDGVCVRVYTPVGKAEQGKFALEVAAKTLPFYKDYFNVPYPLPKIDLIAIADFAAGAMENWGLVTYRETALLIDPKNSCSSSRQWVALVVGHELAHQWFGNLVTMEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVSADYTRAQELDALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHDYIGDKDFKKGMNMYLTKFQQKNAATEDLWECLENASGKPIAAVMNTWTKQMGFPLIYVEAEQVEDDRLLRLSQRKFCASGPYVGEDCPQWMVPITISTSEDPNQAKLKILMDKPEMNVVLKDVKPDQWVKLNLGTVGFYRTQYSSAMLESLLPGIRDLSLPPVDRLGLQNDLFSLARAGIISTVEVLKVMEAFVNEPNYTVWSDLSCNLGILSTLLSHTDFYEEIQEFVKDVFSPIGERLGWDPKPGEGHLDALLRGLVLGKLGKAGHKATLEEARRRFKDHVEGKQILSADLRSPVYLTVLKHGDGTTLDIMLKLHKQADMQEEKNRIERVLGATLSPELIQKVLTFALSEEVRPQDTVSVIGGVAGGSKHGRKAAWKFIKDNWEELYNRYQGGFLISRLIKLSVEGFAVDKMAGEVKAFFESHPAPSAERTIQQCCENILLNAAWLKRDAESIHQYLLQRKASPPTA", "length": 944, "header": "tr|F1RWJ6-1|A0A5G2QES1_PIG Computationally mapped isoform of Aminopeptidase OS=Sus scrofa OX=9823 GN=NPEPPS PE=1 SV=4 CANONICAL=A0A5G2QES1-1" }, "locus": { "chromosome": "12", "start_pos": 23890696, "end_pos": 23805087, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000019067.5", "url": "https://www.ensembl.org/id/ENSSSCT00000019067.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000018561.5", "url": "https://www.ensembl.org/id/ENSSSCP00000018561.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1RWJ6", "url": "https://www.uniprot.org/uniprotkb/F1RWJ6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-983168", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983168", "resource": "Reactome", "description": "Antigen processing: Ubiquitination & Proteasome degradation" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QES1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QES1" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QES1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QES1" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QES1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QES1" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QES1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QES1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QES1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QES1" } ], "pmid": "" }, { "name": "peptide catabolic process", "id": "GO:0043171", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043171", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QES1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QES1" } ], "pmid": "" }, { "name": "cellular response to hypoxia", "id": "GO:0071456", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071456", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QES1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QES1" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QES1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QES1" } ], "pmid": "" }, { "name": "metalloaminopeptidase activity", "id": "GO:0070006", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070006", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QES1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QES1" } ], "pmid": "" }, { "name": "alanyl aminopeptidase activity", "id": "GO:0016285", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016285", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QES1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QES1" } ], "pmid": "" }, { "name": "metallopeptidase activity", "id": "GO:0008237", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008237", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QES1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QES1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 477, "end_pos": 479, "annotation": "n_glycosylation_sequon" }, { "start_pos": 55, "end_pos": 57, "annotation": "n_glycosylation_sequon" }, { "start_pos": 641, "end_pos": 643, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-983162", "name": "Trimming of N-ter extended precursor fragments by cytosolic aminopeptidases", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-983162", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983162" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QES1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 912, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QES1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QES1" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QES1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QES1" }, { "id": "PF17900", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17900" } ], "ann_type": 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"https://www.uniprot.org/uniprotkb/A0A286ZXK2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZXK2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZXK2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QBP9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBP9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QBP9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBP9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU38", "url": "https://www.uniprot.org/uniprotkb/F1SU38", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU38-1", "url": "https://www.uniprot.org/uniprotkb/F1SU38-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRVLRACLLLCVLVVSDSKGSHELHQESGASNCGCLNGGKCVSYKYFSNIQRCSCPKKFQGEHCEIDTSQTCFEGNGHSYRGKANTNTGGRPCLPWNSATVLLNTYHAHRPDALQLGLGKHNYCRNPDNQRRPWCYVQVGLKQLVQECMVPNCSGGKNPFSTPEKVEFQCGQKALRPRFKIVGGKSTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVVSATHCFINYQQKEDYIVYLGRQTLHSSTRGEMEFEVEKLILHEDYSADSLAHHNDIALLKIRTDKGQCAQPSRSIQTICLPPVNGDAHFGASCEIVGFGKEDPSDYLYPEQLKMTVVKLVSHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSTQGRLTLTGIVSWGRECAMKDKPGVYTRVSHFLTWIHTHVGGENGLAH", "length": 433, "header": "tr|A0A5G2QBP9-1|A0A5G2QBP9_PIG Isoform 1 of Urokinase-type plasminogen activator OS=Sus scrofa OX=9823 GN=PLAU PE=4 SV=1 CANONICAL=A0A5G2QBP9-1" }, "isoforms": [ { "isoform_ac": "A0A286ZXK2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZXK2/entry", "sequence": { "sequence": "MRVLRACLLLCVLVVSDSKVSGFSNCGCLNGGKCVSYKYFSNIQRCSCPKKFQGEHCEIDTSQTCFEGNGHSYRGKANTNTGGRPCLPWNSATVLLNTYHAHRPDALQLGLGKHNYCRNPDNQRRPWCYVQVGLKQLVQECMVPNCSGGESHRPAYDGKNPFSTPEKVEFQCGQKALRPRFKIVGGKSTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVVSATHCFINYQQKEDYIVYLGRQTLHSSTRGEMEFEVEKLILHEDYSADSLAHHNDIALLKIRTDKGQCAQPSRSIQTICLPPVNGDAHFGASCEIVGFGKEDPSDYLYPEQLKMTVVKLVSHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSTQGRLTLTGIVSWGRECAMKDKPGVYTRVSHFLTWIHTHVGGENGLAH", "length": 435, "header": "tr|A0A286ZXK2-1|A0A5G2QBP9_PIG Computationally mapped isoform of Urokinase-type plasminogen activator OS=Sus scrofa OX=9823 GN=PLAU PE=4 SV=1 CANONICAL=A0A5G2QBP9-1" }, "locus": { "chromosome": "14", "start_pos": 76634228, "end_pos": 76629752, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055275.2", "url": "https://www.ensembl.org/id/ENSSSCT00000055275.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036249.2", "url": "https://www.ensembl.org/id/ENSSSCP00000036249.2" } ] } }, { "isoform_ac": "A0A5G2QBP9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBP9/entry", "sequence": { "sequence": "MRVLRACLLLCVLVVSDSKGSHELHQESGASNCGCLNGGKCVSYKYFSNIQRCSCPKKFQGEHCEIDTSQTCFEGNGHSYRGKANTNTGGRPCLPWNSATVLLNTYHAHRPDALQLGLGKHNYCRNPDNQRRPWCYVQVGLKQLVQECMVPNCSGGKNPFSTPEKVEFQCGQKALRPRFKIVGGKSTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVVSATHCFINYQQKEDYIVYLGRQTLHSSTRGEMEFEVEKLILHEDYSADSLAHHNDIALLKIRTDKGQCAQPSRSIQTICLPPVNGDAHFGASCEIVGFGKEDPSDYLYPEQLKMTVVKLVSHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSTQGRLTLTGIVSWGRECAMKDKPGVYTRVSHFLTWIHTHVGGENGLAH", "length": 433, "header": "tr|A0A5G2QBP9-1|A0A5G2QBP9_PIG Isoform 1 of Urokinase-type plasminogen activator OS=Sus scrofa OX=9823 GN=PLAU PE=4 SV=1 CANONICAL=A0A5G2QBP9-1" }, "locus": { "chromosome": "14", "start_pos": 76634228, "end_pos": 76629752, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081718.1", "url": "https://www.ensembl.org/id/ENSSSCT00000081718.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061928.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061928.1" } ] } }, { "isoform_ac": "F1SU38-1", "url": "https://www.uniprot.org/uniprotkb/F1SU38/entry", "sequence": { "sequence": "MRVLRACLLLCVLVVSDSKGSHELHQESGASNCGCLNGGKCVSYKYFSNIQRCSCPKKFQGEHCEIDTSQTCFEGNGHSYRGKANTNTGGRPCLPWNSATVLLNTYHAHRPDALQLGLGKHNYCRNPDNQRRPWCYVQVGLKQLVQECMVPNCSGGESHRPAYDGKNPFSTPEKVEFQCGQKALRPRFKIVGGKSTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVVSATHCFINYQQKEDYIVYLGRQTLHSSTRGEMEFEVEKLILHEDYSADSLAHHNDIALLKIRTDKGQCAQPSRSIQTICLPPVNGDAHFGASCEIVGFGKEDPSDYLYPEQLKMTVVKLVSHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSTQGRLTLTGIVSWGRECAMKDKPGVYTRVSHFLTWIHTHVGGENGLAH", "length": 442, "header": "tr|F1SU38-1|A0A5G2QBP9_PIG Computationally mapped isoform of Urokinase-type plasminogen activator OS=Sus scrofa OX=9823 GN=PLAU PE=4 SV=1 CANONICAL=A0A5G2QBP9-1" }, "locus": { "chromosome": "14", "start_pos": 76634228, "end_pos": 76629752, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011287.4", "url": "https://www.ensembl.org/id/ENSSSCT00000011287.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000010995.2", "url": "https://www.ensembl.org/id/ENSSSCP00000010995.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SU38", "url": "https://www.uniprot.org/uniprotkb/F1SU38" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-6798695", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798695", "resource": "Reactome", "description": "Neutrophil degranulation" }, { "id": "R-SSC-75205", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-75205", "resource": "Reactome", "description": "Dissolution of Fibrin Clot" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2MYZ7-1", "protein_name": "Urokinase-type plasminogen activator", "gene_name": "Plau", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKVWLACLLLCALVVNDSEGRHELGASDESNCGCQNGGICVSYKYFSSIRRCSCPKRFQGEHCEIDTSKTCYHGRGQSYRGKANTDTKGRPCLAWNSPAVLQKVYNAHIPDALTLGLGKHNYCRNPDNQRRPWCYVQIGLKQFPHECMVQDCSVSKKPPSSPDQQGFQCGQKALRPRFKIVGGEFTVIENQPWFAAIYRKNNGGIPPTFKCGGSLISPCWVVSATHCFINDPKKENYVVYLGQSQRNAYTPGEMKFEVEQLILHERYSADSLAHHNDIALLKIRTSTGHCAQPSRSIQTICLPPRLGDVHFGSDCEITGFGYENVADYMHPKNLKMAVVKLIPHEQCMQPHYYGSEITYKMLCAADPQWETDACQGDSGGPLVCDINGRPTLSGIVSWGRGCSMKNKPGVYTRVSYFLSWIQAHIGEENGLAF", "length": 433 }, "evidence": [ { "id": "A0A5G2QBP9", "url": "https://omabrowser.org/oma/group/A0A5G2QBP9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P00749-1", "protein_name": "Urokinase-type plasminogen activator", "gene_name": "PLAU", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRALLARLLLCVLVVSDSKGSNELHQVPSNCDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEGNGHFYRGKASTDTMGRPCLPWNSATVLQQTYHAHRSDALQLGLGKHNYCRNPDNRRRPWCYVQVGLKLLVQECMVHDCADGKKPSSPPEELKFQCGQKTLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSHTKEENGLAL", "length": 431 }, "evidence": [ { "id": "A0A5G2QBP9", "url": "https://omabrowser.org/oma/group/A0A5G2QBP9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P06869-1", "protein_name": "Urokinase-type plasminogen activator", "gene_name": "Plau", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKVWLASLFLCALVVKNSEGGSVLGAPDESNCGCQNGGVCVSYKYFSRIRRCSCPRKFQGEHCEIDASKTCYHGNGDSYRGKANTDTKGRPCLAWNAPAVLQKPYNAHRPDAISLGLGKHNYCRNPDNQKRPWCYVQIGLRQFVQECMVHDCSLSKKPSSSVDQQGFQCGQKALRPRFKIVGGEFTEVENQPWFAAIYQKNKGGSPPSFKCGGSLISPCWVASAAHCFIQLPKKENYVVYLGQSKESSYNPGEMKFEVEQLILHEYYREDSLAYHNDIALLKIRTSTGQCAQPSRSIQTICLPPRFTDAPFGSDCEITGFGKESESDYLYPKNLKMSVVKLVSHEQCMQPHYYGSEINYKMLCAADPEWKTDSCKGDSGGPLICNIEGRPTLSGIVSWGRGCAEKNKPGVYTRVSHFLDWIQSHIGEEKGLAF", "length": 433 }, "evidence": [ { "id": "A0A5G2QBP9", "url": "https://omabrowser.org/oma/group/A0A5G2QBP9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P15120-1", "protein_name": "Urokinase-type plasminogen activator", "gene_name": "PLAU", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKLIIFLTVTLCTLVTGLDSVYIRQYYKLSHKHRPQHRECQCLNGGTCITYRFFSQIKRCLCPEGYGGLHCEIDTNSICYSGNGEDYRGMAEDPGCLYWDHPSVIRWGDYHADLKNALQLGLGKHNYCRNPNGRSRPWCYTKRRYSIQETPCSTIEKCERTCGQRSFSKYFKIVGGSQAEVETQPWIAGIFQNIMGTDQFLCGGSLIDPCWVLTAAHCFYNPTKKQPNKSVYKVFLGKSILNTNDEHEQVFMVDEIISHPDFTDHTGGNDNDIALIRIRTASGQCAVESNYVRTVCLPEKNLNLYDNTWCEIAGYGKQNSYDIYYAQRLMSATVNLISQDDCKNKYYDSTRVTDNMVCAGDPLWETDACKGDSGGPMVCEHNGRMTLYGIVSWGDGCAKKNKPGVYTRVTRYLNWIDSNMNAVFTKSRSFREPK", "length": 434 }, "evidence": [ { "id": "A0A5G2QBP9", "url": "https://omabrowser.org/oma/group/A0A5G2QBP9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q05589-1", "protein_name": "Urokinase-type plasminogen activator", "gene_name": "PLAU", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRVLLACLLVCALVVSDSDGSNEVHKESGESNCGCLNGGKCVTYKYFSNIQRCSCPKKFQGEHCEIDTSKTCYQGNGHSYRGKANRDLSGRPCLAWDSPTVLLKMYHAHRSDAIQLGLGKHNYCRNPDNQRRPWCYVQIGLKQFVQFCMVQDCSVGKSPSSPREKEEFQCGQKALRPRFKIVGGQVTNAENQPWFAAIYRRHRGGSITYLCGGSLISPCWVVSATHCFIDHPKKENYIVYLGQSRLNSDTRGEMQFEVEKLILHEDYSAESLAHHNDIALLKIRTSRGQCAQPSRSIQTICLPPEHEDAHSRTRCEITGFGKENPSDYRYSDELKMTFVSLVSHEVCQQPHYYGAEVTDKMLCAADPQWETDSCQGDSGGPLVCTIQGRLTLTGIVSWGRDCAMKYKPGVYTRVSKFLPWINTHTRGEINLVL", "length": 433 }, "evidence": [ { "id": "A0A5G2QBP9", "url": "https://omabrowser.org/oma/group/A0A5G2QBP9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 8, "go_terms": [ { "name": "regulation of cell adhesion mediated by integrin", "id": "GO:0033628", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033628", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBP9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBP9" } ], "pmid": "" }, { "name": "regulation of smooth muscle cell-matrix adhesion", "id": "GO:2000097", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000097", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBP9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBP9" } ], "pmid": "" }, { "name": "regulation of smooth muscle cell migration", "id": "GO:0014910", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0014910", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBP9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBP9" } ], "pmid": "" }, { "name": "positive regulation of epidermal growth factor receptor signaling pathway", "id": "GO:0045742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045742", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBP9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBP9" } ], "pmid": "" }, { "name": "plasminogen activation", "id": "GO:0031639", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031639", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBP9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBP9" } ], "pmid": "" }, { "name": "regulation of integrin-mediated signaling pathway", "id": "GO:2001044", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2001044", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBP9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBP9" } ], "pmid": "" }, { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBP9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBP9" } ], "pmid": "" }, { "name": "fibrinolysis", "id": "GO:0042730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042730", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBP9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBP9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "serine-type endopeptidase activity", "id": "GO:0004252", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004252", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBP9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBP9" } ], "pmid": "" }, { "name": "receptor ligand activity", "id": "GO:0048018", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048018", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBP9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBP9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBP9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBP9" } ], "pmid": "" }, { "name": "cell surface", "id": "GO:0009986", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009986", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBP9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBP9" } ], "pmid": "" }, { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBP9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBP9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 152, "end_pos": 154, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-158925", "name": "plasminogen:histidine-rich glycoprotein -> plasmin + histidine-rich glycoprotein (uPA [two-chain] catalyst)", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "extracellular region, plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-158925", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-158925" } ] }, { "id": "R-SSC-158942", "name": "urokinase plasminogen activator (one-chain):uPAR -> urokinase plasminogen activator (two-chain):uPAR", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "extracellular region, plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-158942", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-158942" } ] }, { "id": "R-SSC-158959", "name": "urokinase plasminogen activator + urokinase plasminogen activator receptor (uPAR) -> urokinase plasminogen activator:uPAR", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "extracellular region, plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-158959", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-158959" } ] }, { "id": "R-SSC-158982", "name": "plasminogen:histidine-rich glycoprotein -> plasmin + histidine-rich glycoprotein (uPA [one-chain] catalyst)", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "extracellular region, plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-158982", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-158982" } ] }, { "id": "R-SSC-159001", "name": "urokinase plasminogen activator (two-chain):uPAR + plasminogen activator inhibitor 2 (PAI-2) -> PAI-2:urokinase plasminogen activator (two-chain):uPAR", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "extracellular region, plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-159001", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-159001" } ] }, { "id": "R-SSC-159005", "name": "urokinase plasminogen activator (two-chain):uPAR + plasminogen activator inhibitor 1 (PAI-1) -> PAI-1:urokinase plasminogen activator (two-chain):uPAR", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "extracellular region, plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-159005", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-159005" } ] }, { "id": "R-SSC-6798747", "name": "Exocytosis of tertiary granule membrane proteins", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "plasma membrane, tertiary granule membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6798747", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798747" } ] }, { "id": "R-SSC-6799350", "name": "Exocytosis of specific granule membrane proteins", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "plasma membrane, specific granule membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6799350", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6799350" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QBP9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 433, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QBP9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QBP9" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QBP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBP9" }, { "id": "PS50026", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50026" } 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"database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd03061", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03061", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd10297", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd10297", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR002946", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002946", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR010987", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010987", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036249", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036249", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036282", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036282", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040079", "url": 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"categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZIU2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIU2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZIU2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIU2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BH49", "url": "https://www.uniprot.org/uniprotkb/A0A287BH49", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BH49-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BH49-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q7W2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7W2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q7W2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7W2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QKB6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKB6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QKB6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKB6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0F7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0F7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0F7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0F7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FKT2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FKT2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FKT2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FKT2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSDEDYSTIYDRVQKERVYENTEQPAENGGPLYDAIHEESRAEDKVYATELETHEYDFVAVYQVGREESSSASFQPEVGEYLLPDEVYPEAQDLQPHEAQDDRSTWVGELFSPTQDQQAGLEQPQENGSEMEEAQPSPSSFSTRHSRALSPSEGFPTHSSAAAVSEEKEPTSTSPEISLFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPRLAAKHRESNTAGIDIFSKFSAYIKNTKQQSNAALERGLTKALKKLDDYLNTPLPEEIDTSTREDDDKVSRRKFLDGDELTLADCNLLPKLHVVKIVTKKYRNYDFPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRLSRS", "length": 413, "header": "tr|A0A5G2Q7W2-1|A0A5G2Q7W2_PIG Isoform 1 of Chloride intracellular channel protein OS=Sus scrofa OX=9823 GN=CLIC5 PE=1 SV=1 CANONICAL=A0A5G2Q7W2-1" }, "isoforms": [ { "isoform_ac": "A0A286ZIU2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIU2/entry", "sequence": { "sequence": "MSDEDYSTIYDRVQKERVYENTEQPAENGGPLYDAIHEESRAEDKVYATELETHEYDFVAVYQVGREESSSASFQPEVGEYLLPDEVYPEAQDLQPHEAQDDRSTWVGELFSPTQENGSEMEEAQPSPSSFSTRHSRALSPSEGFPTHSSAAAVSEEKEPTSTSPEISLFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPRLAAKHRESNTAGIDIFSKFSAYIKNTKQQSNAALERGLTKALKKLDDYLNTPLPEEIDTSTREDDDKVSRRKFLDGDELTLADCNLLPKLHVVKIVTKKYRNYDFPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRLSRS", "length": 403, "header": "tr|A0A286ZIU2-1|A0A5G2Q7W2_PIG Computationally mapped isoform of Chloride intracellular channel protein OS=Sus scrofa OX=9823 GN=CLIC5 PE=1 SV=2 CANONICAL=A0A5G2Q7W2-1" }, "locus": { "chromosome": "7", "start_pos": 40863804, "end_pos": 40687537, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063969.2", "url": "https://www.ensembl.org/id/ENSSSCT00000063969.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031471.2", "url": "https://www.ensembl.org/id/ENSSSCP00000031471.2" } ] } }, { "isoform_ac": "A0A287BH49-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BH49/entry", "sequence": { "sequence": "MRTPSSPQKTEAPFMMPSTKSQGQKTRFMPPSWKPTNMTSWPFIKLGARKAARPLFNQKWENTSCLMKCILRPKIFSPMRPRMTGAPGWENCSHPPRTSRLAWSSPRRMEARWRKPSLLLPVSPPGTAGPCPPVRGSPPTPLLLLFLKKRNQLPPAPRLVELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPRLAAKHRESNTAGIDIFSKFSAYIKNTKQQSNAALERGLTKALKKLDDYLNTPLPEEIDTSTREDDDKVSRRKFLDGDELTLADCNLLPKLHVVKIVTKKYRNYDFPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRLSRS", "length": 396, "header": "tr|A0A287BH49-1|A0A5G2Q7W2_PIG Computationally mapped isoform of Chloride intracellular channel protein OS=Sus scrofa OX=9823 GN=CLIC5 PE=1 SV=2 CANONICAL=A0A5G2Q7W2-1" }, "locus": { "chromosome": "7", "start_pos": 40863749, "end_pos": 40687537, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045881.2", "url": "https://www.ensembl.org/id/ENSSSCT00000045881.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055679.2", "url": 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{ "database": "Ensembl Peptide", "id": "ENSSSCP00000060219.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060219.1" } ] } }, { "isoform_ac": "A0A5G2QKB6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKB6/entry", "sequence": { "sequence": "MRTPSSPQKTEAPFMMPSTKSQGQKTRFMPPSWKPTNMTSWPFIKLGARKAARPLFNQKWENTSCLMKCILRPKIFSPMRPRMTGAPGWENCSHPPRTSRLAWSSPRRMEARWRKPSLLLPVSPPGTAGPCPPVRGSPPTPLLLLFLKKRNQLPPAPRLIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPRLAAKHRESNTAGIDIFSKFSAYIKNTKQQSNAALERGLTKALKKLDDYLNTPLPEEIDTSTREDDDKVSRRKFLDGDELTLADCNLLPKLHVVKIVTKKYRNYDFPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRLSRS", "length": 396, "header": "tr|A0A5G2QKB6-1|A0A5G2QKB6_PIG Computationally mapped isoform of Chloride intracellular channel protein OS=Sus scrofa OX=9823 GN=CLIC5 PE=1 SV=2 CANONICAL=A0A5G2Q7W2-1" }, "locus": { "chromosome": "7", "start_pos": 40863749, "end_pos": 40687537, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": 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"id": "ENSSSCP00000070635.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070635.1" } ] } }, { "isoform_ac": "A0A8W4FKT2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FKT2/entry", "sequence": { "sequence": "MTDAATANGDDRDPEIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPRLAAKHRESNTAGIDIFSKFSAYIKNTKQQSNAALERGLTKALKKLDDYLNTPLPEEIDTSTREDDDKVSRRKFLDGDELTLADCNLLPKLHVVKVRMLYPPVLLRPRSIRGPGHLWGE", "length": 221, "header": "tr|A0A8W4FKT2-1|A0A5G2Q7W2_PIG Computationally mapped isoform of Chloride intracellular channel protein OS=Sus scrofa OX=9823 GN=CLIC5 PE=1 SV=1 CANONICAL=A0A5G2Q7W2-1" }, "locus": { "chromosome": "7", "start_pos": 40807659, "end_pos": 40696177, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000101924.1", "url": "https://www.ensembl.org/id/ENSSSCT00000101924.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080086.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080086.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIU2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIU2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": 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"database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036575", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036575", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR11477", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11477", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11477:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11477:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07500", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07500", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08711", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08711", "database": "Pfam", "categories": [ "Protein 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"A0A5G2RD62-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RD62/entry", "sequence": { "sequence": "MGQEEELLRIARKLEKMVARKNTTTRIGVAVNGVRKHCSDKEVVSLAKVLIRNWKRLLDSPAPPKGEKGEKRVKAKKKEKRLDCSSWKPETSLSPPRKKRMEEPKDRRDSVDSKSSATSSPKRPSMERSNSSKSKVETPRTPSSPSSPTFAPSVCLLAPCYLTGDSVRDKCVEMLSAALKADDDYKDYGINCDKMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC", "length": 328, "header": "tr|A0A5G2RD62-1|A0A5G2Q9G1_PIG Computationally mapped isoform of Transcription elongation factor A protein 3 OS=Sus scrofa OX=9823 GN=TCEA3 PE=3 SV=1 CANONICAL=A0A5G2Q9G1-1" }, "locus": { "chromosome": "6", "start_pos": 81304478, "end_pos": 81268517, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089242.2", "url": "https://www.ensembl.org/id/ENSSSCT00000089242.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074412.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074412.1" } ] } }, { "isoform_ac": "A0A8W4F9X3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9X3/entry", "sequence": { "sequence": "MGQEEELLRIARKLEKMVARKNTEGALDLLKKLNSCEMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIRNWKRLLDSPAPPKGEKGEKRVKAKKKEKRLDCSSWKPETSLSPPRKKRMEEPKDRRDSVDSKSSATSSPKRPSMERSNSSKSKVETPRTPSSPSSPTFAPSVCLLAPCYLTGDSVRDKCVEMLSAALKADDDYKDYGINCDKMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEVRAEAGTSVEDEPTASLAGRSETPHPSGTPDHQHSEHGSCIQHCAKRIRCIGQF", "length": 328, "header": "tr|A0A8W4F9X3-1|A0A5G2Q9G1_PIG Computationally mapped isoform of Transcription elongation factor A protein 3 OS=Sus scrofa OX=9823 GN=TCEA3 PE=3 SV=1 CANONICAL=A0A5G2Q9G1-1" }, "locus": { "chromosome": "6", "start_pos": 81304478, "end_pos": 81276979, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000099154.1", "url": "https://www.ensembl.org/id/ENSSSCT00000099154.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076076.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076076.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMS7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMS7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], 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"MDVLKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLTSSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVNKGLRNDLKAALDKIDQQYLNELVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL", "length": 342, "header": "tr|A0A4X1VY37-1|A0A4X1VY37_PIG Isoform 1 of Pre-mRNA-splicing factor 18 OS=Sus scrofa OX=9823 GN=PRPF18 PE=3 SV=1 CANONICAL=A0A4X1VY37-1" }, "isoforms": [ { "isoform_ac": "A0A286ZQZ9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQZ9/entry", "sequence": { "sequence": "MDVLKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLTSSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVNKGLRNDLKAALDKIDQQYLNELVGGQEPGEEDTQNDLKVHEENTTIEELEFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL", "length": 319, "header": "tr|A0A286ZQZ9-1|A0A4X1VY37_PIG Computationally mapped isoform of Pre-mRNA-splicing factor 18 OS=Sus scrofa OX=9823 GN=PRPF18 PE=3 SV=1 CANONICAL=A0A4X1VY37-1" }, "locus": { "chromosome": "10", "start_pos": 48122095, "end_pos": 48066240, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058845.2", "url": "https://www.ensembl.org/id/ENSSSCT00000058845.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034045.1", "url": "https://www.ensembl.org/id/ENSSSCP00000034045.1" } ] } }, { "isoform_ac": "A0A287B0Z6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B0Z6/entry", "sequence": { "sequence": "MASSTIGNPERSFPSSRSTQLPPEENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLTSSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVNKGLRNDLKAALDKIDQQYLNELVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQHHVLKRLSSPLYTLASFVED", "length": 338, "header": "tr|A0A287B0Z6-1|A0A4X1VY37_PIG Computationally mapped isoform of Pre-mRNA-splicing factor 18 OS=Sus scrofa OX=9823 GN=PRPF18 PE=3 SV=2 CANONICAL=A0A4X1VY37-1" }, "locus": { "chromosome": "10", "start_pos": 48122300, "end_pos": 48085058, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061232.2", "url": "https://www.ensembl.org/id/ENSSSCT00000061232.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049778.2", "url": "https://www.ensembl.org/id/ENSSSCP00000049778.2" } ] } }, { "isoform_ac": "A0A4X1VY37-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VY37/entry", "sequence": { "sequence": "MDVLKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLTSSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVNKGLRNDLKAALDKIDQQYLNELVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL", "length": 342, "header": "tr|A0A4X1VY37-1|A0A4X1VY37_PIG Isoform 1 of Pre-mRNA-splicing factor 18 OS=Sus scrofa OX=9823 GN=PRPF18 PE=3 SV=1 CANONICAL=A0A4X1VY37-1" }, "locus": { "chromosome": "10", "start_pos": 48122095, "end_pos": 48066240, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024330.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024330.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000027625.2", "url": "https://www.ensembl.org/id/ENSSSCP00000027625.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQZ9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQZ9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100513617", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513617", "resource": "KEGG Pathway" }, { "id": "R-SSC-72163", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72163", "resource": "Reactome", "description": "mRNA Splicing - Major Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0XMZ1-1", "protein_name": "Pre-mRNA-splicing factor 18", "gene_name": "PRPF18", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MDILKREISRKRQQLEDKELGNKKYFKRSELAKKEEEAYFQRCGYKVQQQEEEENPLTSTNPVLELELAEEKLPMTLSRQEVIRRLRERGEPVRLFGETDYDAFQRLRKIEILAPEVNKGLRNDLKAALDKIDQQYLNEIVGGQEAGDDDSQNDLKVHEENTTIEELEALGESLGRGDDHYDMDIITKFLKFLLGVWAKELNAREDYVKRGVQGKLNSATQKQTESYLRPLFRKLRKRTLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL", "length": 340 }, "evidence": [ { "id": "A0A4X1VY37", "url": "https://omabrowser.org/oma/group/A0A4X1VY37/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3GVR0-1", "protein_name": "Pre-mRNA-splicing factor 18", "gene_name": "Prpf18", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKVQPKEDDQKPLTSSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVNKGLRNDLKAALDKIDQQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL", "length": 342 }, "evidence": [ { "id": "A0A4X1VY37", "url": "https://omabrowser.org/oma/group/A0A4X1VY37/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q2HJ41-1", "protein_name": "Pre-mRNA-splicing factor 18", "gene_name": "PRPF18", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MDVLKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKDEDQKPLTSSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVNKGLRNDLKAALDKIDQQYLNELVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL", "length": 342 }, "evidence": [ { "id": "A0A4X1VY37", "url": "https://omabrowser.org/oma/group/A0A4X1VY37/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q6GMH0-1", "protein_name": "Pre-mRNA-splicing factor 18", "gene_name": "prpf18", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDILKAEIARKRKLIEEKELIDDSKKYFKRAELARKEEEDYYRRCGYKMDKPEEEAPQSTSANPVLELELTEEKLPMTLSRQEVIRRLRERGEPIRLFGESDYDAFQRLRKIEILAPEVNKGLRNDLKAAMDKIDQQYLNEIVGGAEGAELDTQHDLKVHEENTTIEELEALGASLGNGNDVRDMDIINKVLRFLLGVWAKDLNSREDHIKRSVQGKLASATQKQTESYLEPLFRKLRKKNLPADIKESITDIIKFMLEREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL", "length": 342 }, "evidence": [ { "id": "A0A4X1VY37", "url": "https://omabrowser.org/oma/group/A0A4X1VY37/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8BM39-1", "protein_name": "Pre-mRNA-splicing factor 18", "gene_name": "Prpf18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDILKSEILRKRQLVEDRNLLVENKKYFKRSELARKEEEAYYERCGYKIQPKEDDQKPLTSSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVNKGLRNDLKAALDKIDQQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL", "length": 342 }, "evidence": [ { "id": "A0A4X1VY37", "url": "https://omabrowser.org/oma/group/A0A4X1VY37/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8MML7-1", "protein_name": "Pre-mRNA-splicing factor 18", "gene_name": "prp18", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSSLSNLKEQLEKKRKEAQLKNSNNNNNNNNNNSNSNNGCDKSEEPATKKYKTRGEIDKELKQKKEEERIKKEKEKEKEKEKEKENYNNNNNSNVNSNKNENNINIDNDNDSNDKINKLKENEGFLPDIVVIQRLRERSQPITYFGETSIDRAMRLKKLEENDPIEYTQGDNEFANILKQIEQRKMKKHQDSADNEKEKEENENNDKKKQQQQQENEESEEQELERLRIDSSKCKESKILYFLKGLLNDWITNLENRSDDEKKSRQGKIAEATYYQCKSHIQPLFTSLREKTLSIDILEHINEIVEFCKSREYVRANDEYLQMAIGNAPWPMGVTMVGIHERSSREKIFSNQVAHVLNDEMQRKYIQAVKRLMTFCQTQYPTAPSRSIG", "length": 389 }, "evidence": [ { "id": "A0A4X1VY37", "url": "https://omabrowser.org/oma/group/A0A4X1VY37/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9SA55-1", "protein_name": "Pre-mRNA-splicing factor 18", "gene_name": "PRP18A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": 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"tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QFH7-1", "uniprot_ac": "A0A5G2QFH7", "uniprot_id": "A0A5G2QFH7_PIG", "mass": { "chemical_mass": 78780.0, "monoisotopic_mass": 78780.0 }, "refseq": {}, "gene_names": [ { "name": "DBT", "type": "recommended", "evidence": [ { "id": "A0A5G2QFH7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFH7" } ] } ], "protein_names": [ { "name": "Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex", "type": "recommended", "evidence": [ { "id": "A0A5G2QFH7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFH7/entry#names_and_taxonomy" } ] }, { "name": "2.3.1.-", "type": "synonym", "evidence": [ { "id": "A0A5G2QFH7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFH7/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). Within this complex, the catalytic function of this enzyme is to accept, and to transfer to coenzyme A, acyl groups that are generated by the branched-chain alpha-keto acid decarboxylase component.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFH7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFH7#function" }, { "database": "UniProtKB", "id": "ARBA00059178", "url": "https://www.uniprot.org/uniprotkb/ARBA00059178#function" }, { "database": "UniProtKB", "id": "A0A286ZZ34", "url": "https://www.uniprot.org/uniprotkb/A0A286ZZ34#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFH7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFH7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DBT", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFH7", "locus": { "chromosome": "4", "start_pos": 117936612, "end_pos": 117875002, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000006866", "url": "https://www.ensembl.org/id/ENSSSCG00000006866" } ] } } ], "crossref": [ { "id": "A0A5G2QFH7", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QFH7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000006866", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000006866", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd06849", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06849", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100156530", "url": "https://www.ncbi.nlm.nih.gov/gene/100156530", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000089", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000089", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001078", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001078", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003016", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003016", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004167", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004167", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011053", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011053", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023213", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023213", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036625", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036625", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050743", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050743", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "MPFCIKA", "url": "https://omabrowser.org/oma/group/MPFCIKA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZZ34", "url": "https://www.orthodb.org/?gene=A0A286ZZ34", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR43178", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43178", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR43178:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43178:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00198", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00198", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00364", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00364", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02817", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02817", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-70895", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-70895", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013407", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013407", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9837999", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9837999", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9859138", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9859138", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "18865", "url": "https://www.rhea-db.org/rhea/18865", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "84647", "url": "https://www.rhea-db.org/rhea/84647", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "84651", "url": "https://www.rhea-db.org/rhea/84651", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZZ34", "url": "https://www.uniprot.org/uniprotkb/A0A286ZZ34", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZZ34-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZZ34-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AU78", "url": "https://www.uniprot.org/uniprotkb/A0A287AU78", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AU78-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AU78-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFH7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFH7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFH7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFH7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S563", "url": "https://www.uniprot.org/uniprotkb/F1S563", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S563-1", "url": "https://www.uniprot.org/uniprotkb/F1S563-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPSPTARSPSPPHPQTTGGRPPPPSSPTASILLSLSAQPVASPSPLQPHDLSPQPLSPQPGARPHPPVPRPGFPITSGRACCGRLESSAPARGGPAGSSRPSTPSGSARPGAERRERTSHGTRGSSGAAATGQASGPRTHPFHDAAVHLHPRPRHGSRPGAWPTATQPRPEPEEGEKQAPAPQLRNLSLDSRPRDAAEREKTGRLPERPDQGRRTAPRSRQPADCACACARRGAALKGAAPRLFPRIRSFPRGTLAATGELRDEICVRYFQTSGNVHVLKPKYVCSFGAPSFKYSHPHHLLKTSAVLQGQIVQFKLSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYYNLDDTAYVGKPLVDIETEALKDSEEDVVETPAVSHDEHTHQEIKGHKTLATPAVRRLAMENNIKLSEVVGSGKDGRILKEDILNYLEKQTGAILPPSPKAEIIPPPPKPKDRTIPIPISKPPVFTGKDRTEPIKGFHKAMVKTMSAALKIPHFGYCDEVDLTELVKLREELKPIALARGIKLTFMPFFLKAASLGLLQFPILNASMDENCQSITYKASHNIGVAMDTDQGLIVPNVKNVQICSIFEVATELNRLQKLGSAGQLSTPDLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGAIKALPRFNEKGDVHKAQIMNVSWSADHRIIDGATMSRFSNLWKSYLENPSLMLLDLK", "length": 729, "header": "tr|A0A5G2QFH7-1|A0A5G2QFH7_PIG Isoform 1 of Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex OS=Sus scrofa OX=9823 GN=DBT PE=1 SV=1 CANONICAL=A0A5G2QFH7-1" }, "isoforms": [ { "isoform_ac": "A0A286ZZ34-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZZ34/entry", "sequence": { "sequence": "MERWRDVCTTKGSEGGEPTWLETQFLSLPACASEICVRYFQTSGNVHVLKPKYVCSFGAPSFKYSHPHHLLKTSAVLQGQIVQFKLSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYYNLDDTAYVGKPLVDIETEALKDSEEDVVETPAVSHDEHTHQEIKGHKTLATPAVRRLAMENNIKLSEVVGSGKDGRILKEDILNYLEKQTGAILPPSPKAEIIPPPPKPKDRTIPIPISKPPVFTGKDRTEPIKGFHKAMVKTMSAALKIPHFGYCDEVDLTELVKLREELKPIALARGIKLTFMPFFLKAASLGLLQFPILNASMDENCQSITYKASHNIGVAMDTDQGLIVPNVKNVQICSIFEVATELNRLQKLGSAGQLSTPDLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGAIKALPRFNEKGDVHKAQIMNVSWSADHRIIDGATMSRFSNLWKSYLENPSLMLLDLK", "length": 499, "header": "tr|A0A286ZZ34-1|A0A5G2QFH7_PIG Computationally mapped isoform of Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex OS=Sus scrofa OX=9823 GN=DBT PE=1 SV=1 CANONICAL=A0A5G2QFH7-1" }, "locus": { "chromosome": "4", "start_pos": 117921480, "end_pos": 117884920, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055489.3", "url": "https://www.ensembl.org/id/ENSSSCT00000055489.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036965.1", "url": "https://www.ensembl.org/id/ENSSSCP00000036965.1" } ] } }, { "isoform_ac": "A0A287AU78-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AU78/entry", "sequence": { "sequence": "GAVAICVRYFQTSGNVHVLKPKYVCSFGAPSFKYSHPHHLLKTSAVLQGQIVQFKLSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYYNLDDTAYVGKPLVDIETEALKDSEEDVVETPAVSHDEHTHQEIKGHKTLATPAVRRLAMENNIKLSEVVGSGKDGRILKEDILNYLEKQTGAILPPSPKAEIIPPPPKPKDRTIPIPISKPPVFTGKDRTEPIKGFHKAMVKTMSAALKIPHFGYCDEVDLTELVKLREELKPIALARGIKLTFMPFFLKAASLGLLQFPILNASMDENCQSITYKASHNIGVAMDTDQGLIVPNVKNVQICSIFEVATELNRLQKLGSAGQLSTPDLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGAIKVCVLNN", "length": 420, "header": "tr|A0A287AU78-1|A0A5G2QFH7_PIG Computationally mapped isoform of Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex OS=Sus scrofa OX=9823 GN=DBT PE=1 SV=2 CANONICAL=A0A5G2QFH7-1" }, "locus": { "chromosome": "4", "start_pos": 117917757, "end_pos": 117894502, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041954.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041954.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047662.2", "url": "https://www.ensembl.org/id/ENSSSCP00000047662.2" } ] } }, { "isoform_ac": "A0A5G2QFH7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFH7/entry", "sequence": { "sequence": "MPSPTARSPSPPHPQTTGGRPPPPSSPTASILLSLSAQPVASPSPLQPHDLSPQPLSPQPGARPHPPVPRPGFPITSGRACCGRLESSAPARGGPAGSSRPSTPSGSARPGAERRERTSHGTRGSSGAAATGQASGPRTHPFHDAAVHLHPRPRHGSRPGAWPTATQPRPEPEEGEKQAPAPQLRNLSLDSRPRDAAEREKTGRLPERPDQGRRTAPRSRQPADCACACARRGAALKGAAPRLFPRIRSFPRGTLAATGELRDEICVRYFQTSGNVHVLKPKYVCSFGAPSFKYSHPHHLLKTSAVLQGQIVQFKLSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYYNLDDTAYVGKPLVDIETEALKDSEEDVVETPAVSHDEHTHQEIKGHKTLATPAVRRLAMENNIKLSEVVGSGKDGRILKEDILNYLEKQTGAILPPSPKAEIIPPPPKPKDRTIPIPISKPPVFTGKDRTEPIKGFHKAMVKTMSAALKIPHFGYCDEVDLTELVKLREELKPIALARGIKLTFMPFFLKAASLGLLQFPILNASMDENCQSITYKASHNIGVAMDTDQGLIVPNVKNVQICSIFEVATELNRLQKLGSAGQLSTPDLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGAIKALPRFNEKGDVHKAQIMNVSWSADHRIIDGATMSRFSNLWKSYLENPSLMLLDLK", "length": 729, "header": "tr|A0A5G2QFH7-1|A0A5G2QFH7_PIG Isoform 1 of Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex OS=Sus scrofa OX=9823 GN=DBT PE=1 SV=1 CANONICAL=A0A5G2QFH7-1" }, "locus": { "chromosome": "4", "start_pos": 117921480, "end_pos": 117875002, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091126.2", "url": "https://www.ensembl.org/id/ENSSSCT00000091126.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063492.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063492.1" } ] } }, { "isoform_ac": "F1S563-1", "url": "https://www.uniprot.org/uniprotkb/F1S563/entry", "sequence": { "sequence": "MAAARVLRTWSRNAGRLICVRYFQTSGNVHVLKPKYVCSFGAPSFKYSHPHHLLKTSAVLQGQIVQFKLSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYYNLDDTAYVGKPLVDIETEALKDSEEDVVETPAVSHDEHTHQEIKGHKTLATPAVRRLAMENNIKLSEVVGSGKDGRILKEDILNYLEKQTGAILPPSPKAEIIPPPPKPKDRTIPIPISKPPVFTGKDRTEPIKGFHKAMVKTMSAALKIPHFGYCDEVDLTELVKLREELKPIALARGIKLTFMPFFLKAASLGLLQFPILNASMDENCQSITYKASHNIGVAMDTDQGLIVPNVKNVQICSIFEVATELNRLQKLGSAGQLSTPDLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGAIKVGAIRAMDPVRDLGM", "length": 442, "header": "tr|F1S563-1|A0A5G2QFH7_PIG Computationally mapped isoform of Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex OS=Sus scrofa OX=9823 GN=DBT PE=1 SV=4 CANONICAL=A0A5G2QFH7-1" }, "locus": { "chromosome": "4", "start_pos": 117936548, "end_pos": 117884760, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007519.5", "url": "https://www.ensembl.org/id/ENSSSCT00000007519.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007320.5", "url": "https://www.ensembl.org/id/ENSSSCP00000007320.5" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 103, "start_aa": "Thr", "end_pos": 103, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr103", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZZ34", "url": "https://www.uniprot.org/uniprotkb/A0A286ZZ34" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-70895", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-70895", "resource": "Reactome", "description": "Branched-chain amino acid catabolism" }, { "id": "R-SSC-9013407", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013407", "resource": "Reactome", "description": "RHOH GTPase cycle" }, { "id": "R-SSC-9837999", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9837999", "resource": "Reactome", "description": "Mitochondrial protein degradation" }, { "id": "R-SSC-9859138", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9859138", "resource": "Reactome", "description": "BCKDH synthesizes BCAA-CoA from KIC, KMVA, KIV" } ], "orthologs": [ { "uniprot_canonical_ac": "B2GV15-1", "protein_name": "Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex", "gene_name": "Dbt", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAARVLGTWSRNAVRLTCVRYFQTYNNVHILKPQHVCSVGYPLLKSSQPRHSLRTAAVLQGQVVQFKLSDIGEGIREVTIKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKRLYYNLDDIAYVGKPLIDIETEALKDSEEDVVETPAVAHDEHTHQEIKGQKTLATPAVRRLAMENNIKLSEVVGSGKDGRILKEDILNFLEKQTGAILPPSPKSEITPPPPQPRDRPFPTPVSKPPVFLGKDRTEPVTGFQKAMVKTMSAALKIPHFGYCDEVDLTELVKLREELKPVALARGIKLSFMPFFLKAASLGLLQFPILNASVDENCQSITYKASHNIGIAMDTERGLIVPNVKNVQVRSVFEIAMELNRLQKLGSLGQLSTTDLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGAIKALPRFDQKGDVYKAQIMNVSWSADHRVIDGATMSRFSNLWKSYLENPAFMLLDLK", "length": 482 }, "evidence": [ { "id": "A0A5G2QFH7", "url": "https://omabrowser.org/oma/group/A0A5G2QFH7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P11181-1", "protein_name": "Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial", "gene_name": "DBT", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAAALVLRTWSRAAGQLICVRYFQTCGNVHVLKPKYVCFFGYPPFKYSHPYQWLKTTAALQGQIVQFKLSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYYNLDDTAYVGKPLVDIETEALKDSEEDVVETPAVSHDEHTHQEIKGQKTLATPAVRRLAMENNIKLSEVIGSGKDGRILKEDILNYLEKQTGAILPPSPKAEIMPPPPKPKDRTIPIPISKPPVFIGKDRTEPVKGFHKAMVKTMSAALKIPHFGYCDEVDLTELVKLREELKPIAFARGIKLSFMPFFLKAASLGLLQFPILNASVDENCQNITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDLIGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGTIKALPRFNEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLENPAFMLLDLK", "length": 482 }, "evidence": [ { "id": "A0A5G2QFH7", "url": "https://omabrowser.org/oma/group/A0A5G2QFH7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P11182-1", "protein_name": "Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial", "gene_name": "DBT", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAVRMLRTWSRNAGKLICVRYFQTCGNVHVLKPNYVCFFGYPSFKYSHPHHFLKTTAALRGQVVQFKLSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYYNLDDIAYVGKPLVDIETEALKDSEEDVVETPAVSHDEHTHQEIKGRKTLATPAVRRLAMENNIKLSEVVGSGKDGRILKEDILNYLEKQTGAILPPSPKVEIMPPPPKPKDMTVPILVSKPPVFTGKDKTEPIKGFQKAMVKTMSAALKIPHFGYCDEIDLTELVKLREELKPIAFARGIKLSFMPFFLKAASLGLLQFPILNASVDENCQNITYKASHNIGIAMDTEQGLIVPNVKNVQICSIFDIATELNRLQKLGSVSQLSTTDLTGGTFTLSNIGSIGGTFAKPVIMPPEVAIGALGSIKAIPRFNQKGEVYKAQIMNVSWSADHRVIDGATMSRFSNLWKSYLENPAFMLLDLK", "length": 482 }, "evidence": [ { "id": "A0A5G2QFH7", "url": "https://omabrowser.org/oma/group/A0A5G2QFH7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P53395-1", "protein_name": "Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial", "gene_name": "Dbt", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAARVLRTWSQNAVRLTCVRYFQTFNSARVLKPKCVCSVGYPLFKYSQPRHSLRTAAVLQGQVVQFKLSDIGEGIREVTIKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKRLYYNLDDIAYVGKPLIDIETEALKDSEEDVVETPAVSHDEHTHQEIKGQKTLATPAVRRLAMENNIKLSEVVGSGKDGRILKEDILSFLEKQTGAILPPSPKSEITPPPPQPKDRTFPTPIAKPPVFTGKDRTEPVTGFQKAMVKTMSAALKIPHFGYCDEIDLTQLVKLREELKPVALARGIKLSFMPFFLKAASLGLLQFPILNASVDENCQNITYKASHNIGIAMDTELGLIVPNVKNVQVRSVFEIAMELNRLQKLGSSGQLGTTDLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGAIKALPRFDQKGDVYKAQIMNVSWSADHRVIDGATMSRFSNLWKSYLENPAFMLLDLK", "length": 482 }, "evidence": [ { "id": "A0A5G2QFH7", "url": "https://omabrowser.org/oma/group/A0A5G2QFH7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q54TR7-1", "protein_name": "Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex", "gene_name": "bkdC", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISTRQILSKSKRLSNVLQKQQVVRGISTSCIFSNNSNNSNSNSNINSNNKSITRLSNSINIKSNFEKVIFRNYSSAIKFNLADVGEGIAECEVLVWYVKEGDQIKEFDKLCEVQSDKATVEITSRYDGIVTKICHKIGDMAKVGEPLVEITPESSIAEIKLNAGPASQVTVTPPSVSVSSSSSVSSSVSSSVASSLDHEYDITKKNGQKYKVMATPAVRNLGKLKSVDLKQIQGTGKDGRILKEDILNSLNAEAKSKTQSIPIAKEVITTTTTTTTTTTSAAAKETRVPITGIRKIMVRSMNAACSVPHFGFTEEYIMDSLSDLRNKVKPLAAEKGIKLSYLPFIIKAASLSLLRYPVLNSSISQDQTEIIYKNYHNIGIAMDSPQGLLVPNIKNVESKSIFEIAKELNRLQELSGKGLLTPNDMSGGTFTLSNIGTIGGLHSSPVLLLPEVCIGAIGKIQSLPRFNKHHAVITQSIMNISWSGDHRVIDGATMARFSNALKDYLENPSTMIMDTR", "length": 517 }, "evidence": [ { "id": "A0A5G2QFH7", "url": "https://omabrowser.org/oma/group/A0A5G2QFH7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9M7Z1-1", "protein_name": "Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial", "gene_name": "BCE2", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIARRIWRSHRFLRPFSSSSVCSPPFRVPEYLSQSSSSPASRPFFVHPPTLMKWGGGSRSWFSNEAMATDSNSGLIDVPLAQTGEGIAECELLKWFVKEGDSVEEFQPLCEVQSDKATIEITSRFKGKVALISHSPGDIIKVGETLVRLAVEDSQDSLLTTDSSEIVTLGGSKQGTENLLGALSTPAVRNLAKDLGIDINVITGTGKDGRVLKEDVLRFSDQKGFVTDSVSSEHAVIGGDSVSTKASSNFEDKTVPLRGFSRAMVKTMTMATSVPHFHFVEEINCDSLVELKQFFKENNTDSTIKHTFLPTLIKSLSMALTKYPFVNSCFNAESLEIILKGSHNIGVAMATEHGLVVPNIKNVQSLSLLEITKELSRLQHLAANNKLNPEDVTGGTITLSNIGAIGGKFGSPLLNLPEVAIIALGRIEKVPKFSKEGTVYPASIMMVNIAADHRVLDGATVARFCCQWKEYVEKPELLMLQMR", "length": 483 }, "evidence": [ { "id": "A0A5G2QFH7", "url": "https://omabrowser.org/oma/group/A0A5G2QFH7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VXY3-1", "protein_name": "Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex", "gene_name": "Dbct", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MATHLLRNGATCWLLRNCISQRAALRRCLHVTSSLDKTVSFNLSDIGEGIREVTVKEWFVKEGDTVEQFDNLCEVQSDKASVTITSRYDGKITKIHHKIDEIALVGKPLLDFDVVNEDEDEPEDSSSSSSSTSSDSSASENEEKQSAEASATPTEGRVIIPATPSVRRLAKEHQLDLAKVPATGKNGRVLKGDILEFLGQVPPGTNVPHPTLLAKTPSAAPSGAASVSVPADRVEVLKGVRKAMLKSMTESLKIPHFAYSDEIDMTQLMQFRNQLQLVAKENGVPKLTFMPFCIKAASIALSKYPIVNSSLDLASESLVFKGAHNISVAIDTPQGLVVPNIKNCQTKTIIEIAKDLNALVERGRTGSLSPADFADGTFSLSNIGVIGGTYTHPCIMAPQVAIGAMGRTKAVPRFNDKDEVVKAYVMSVSWSADHRVIDGVTMASFSNVWKQYLENPALFLLH", "length": 462 }, "evidence": [ { "id": "A0A5G2QFH7", "url": "https://omabrowser.org/oma/group/A0A5G2QFH7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "dihydrolipoamide branched chain acyltransferase activity", "id": "GO:0043754", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043754", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFH7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFH7" } ], "pmid": "" }, { "name": "ubiquitin protein ligase binding", "id": "GO:0031625", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031625", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFH7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFH7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "mitochondrial matrix", "id": "GO:0005759", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005759", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFH7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFH7" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFH7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFH7" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFH7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFH7" } ], "pmid": "" }, { "name": "mitochondrial nucleoid", "id": "GO:0042645", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042645", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFH7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFH7" } ], "pmid": "" }, { "name": "branched-chain alpha-ketoacid dehydrogenase complex", "id": "GO:0160157", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0160157", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFH7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFH7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "branched-chain alpha-keto acid decarboxylation to branched-chain acyl-CoA", "id": "GO:0120552", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0120552", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFH7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFH7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 186, "end_pos": 188, "annotation": "n_glycosylation_sequon" }, { "start_pos": 573, "end_pos": 575, "annotation": "n_glycosylation_sequon" }, { "start_pos": 692, "end_pos": 694, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "18865", "name": "", "equation": "N(6)-[(R)-dihydrolipoyl]-L-lysyl-[protein] + 2-methylpropanoyl-CoA = N(6)-[(R)-S(8)-2-methylpropanoyldihydrolipoyl]-L-lysyl-[protein] + CoA", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "18865", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/18865" } ] }, { "id": "84647", "name": "", "equation": "N(6)-[(R)-dihydrolipoyl]-L-lysyl-[protein] + 3-methylbutanoyl-CoA = N(6)-[(R)-S(8)-3-methylbutanoyldihydrolipoyl]-L-lysyl-[protein] + CoA", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "84647", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/84647" } ] }, { "id": "84651", "name": "", "equation": "(2S)-2-methylbutanoyl-CoA + N(6)-[(R)-dihydrolipoyl]-L-lysyl-[protein] = N(6)-{(R)-S(8)-[(2S)-2-methylbutanoyl]dihydrolipoyl}-L-lysyl-[protein] + CoA", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "84651", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/84651" } ] }, { "id": "R-SSC-5693148", "name": "BCKDK phosphorylates BCKDH", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5693148", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5693148" } ] }, { "id": "R-SSC-5693153", "name": "PPM1K dephosphorylates p-BCKDH", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5693153", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5693153" } ] }, { "id": "R-SSC-9018758", "name": "RHOH binds effectors at the plasma membrane", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9018758", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9018758" } ] }, { "id": "R-SSC-9838081", "name": "LONP1 degrades mitochondrial matrix proteins", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9838081", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9838081" } ] }, { "id": "R-SSC-9838093", "name": "LONP1 binds mitochondrial matrix proteins", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9838093", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9838093" } ] }, { "id": "R-SSC-9859148", "name": "BCKDHA:BCKDHB tetramer decarboxylates KIC, KMVA, KIV", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [ "R-SSC-70017" ], "output_participant_list": [ "R-SSC-9859145" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9859148", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9859148" } ] }, { "id": "R-SSC-9859163", "name": "DBT transfers BCAA to CoA", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9859163", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9859163" } ] }, { "id": "R-SSC-9859172", "name": "DLD dimer dehydrogenates dihydrolipoyl", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [ "R-SSC-9859167" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9859172", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9859172" } ] } ], "reaction_participants": [ { "participant_id": "R-SSC-70017", "participant_name": "DBT [mitochondrial matrix]", "crossref": [ { "id": "A0A5G2QFH7", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000006866", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCP00000063492", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000091126", "database": "ENSEMBL", "url": "" }, { "id": "87169", "database": "VGNC", "url": "" } ] }, { "participant_id": "R-SSC-9859145", "participant_name": "DBT [mitochondrial matrix]", "crossref": [ { "id": "ENSSSCT00000091126", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCG00000006866", "database": "ENSEMBL", "url": "" }, { "id": "87169", "database": "VGNC", "url": "" }, { "id": "ENSSSCP00000063492", "database": "ENSEMBL", "url": "" }, { "id": "A0A5G2QFH7", "database": "UniProt", "url": "" } ] }, { "participant_id": "R-SSC-9859167", "participant_name": "DBT [mitochondrial matrix]", "crossref": [ { "id": "A0A5G2QFH7", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000006866", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCP00000063492", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000091126", "database": "ENSEMBL", "url": "" }, { "id": "87169", "database": "VGNC", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QFH7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 729, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QFH7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QFH7" } ], 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} ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2Q901-1", "uniprot_ac": "A0A5G2Q901", "uniprot_id": "A0A5G2Q901_PIG", "mass": { "chemical_mass": 51203.0, "monoisotopic_mass": 51203.0 }, "refseq": {}, "gene_names": [ { "name": "POU2F2", "type": "recommended", "evidence": [ { "id": "A0A5G2Q901", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q901" } ] } ], "protein_names": [ { "name": "POU domain protein", "type": "recommended", "evidence": [ { "id": "A0A5G2Q901", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q901/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Transcription factor that binds to the octamer motif (5'-ATTTGCAT-3') and activates the promoters of the genes for some small nuclear RNAs (snRNA) and of genes such as those for histone H2B and immunoglobulins. Modulates transcription transactivation by NR3C1, AR and PGR.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QPV0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPV0#function" }, { "database": "UniProtKB", "id": "ARBA00024760", "url": "https://www.uniprot.org/uniprotkb/ARBA00024760#function" }, { "database": "UniProtKB", "id": "A0A287B2R7", "url": "https://www.uniprot.org/uniprotkb/A0A287B2R7#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q901", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q901" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "POU2F2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q901", "locus": { "chromosome": "6", "start_pos": 49825816, "end_pos": 49727012, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000037132", "url": "https://www.ensembl.org/id/ENSSSCG00000037132" } ] } } ], "crossref": [ { "id": "A0A5G2Q901", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2Q901", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000037132", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000037132", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00086", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00086", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "397105", "url": "https://www.ncbi.nlm.nih.gov/gene/397105", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000327", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000327", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000972", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000972", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001356", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001356", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009057", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009057", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR010982", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010982", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013847", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013847", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017970", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017970", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045703", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045703", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050255", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050255", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "AMDYSHL", "url": "https://omabrowser.org/oma/group/AMDYSHL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287B2R7", "url": "https://www.orthodb.org/?gene=A0A287B2R7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11636", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11636", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11636:SF46", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11636:SF46", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00046", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00046", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00157", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00157", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF19536", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19536", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6807505", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6807505", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287A4D6", "url": "https://www.uniprot.org/uniprotkb/A0A287A4D6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A4D6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A4D6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AS11", "url": "https://www.uniprot.org/uniprotkb/A0A287AS11", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AS11-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AS11-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B2R7", "url": "https://www.uniprot.org/uniprotkb/A0A287B2R7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B2R7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B2R7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q901", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q901", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q901-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q901-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QPV0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPV0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QPV0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPV0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QZP1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZP1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QZP1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZP1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVHSSMGAPEIRMSKPLEAEKQGLDSPSEHTDTERNGPDTNHQNPQNKTSPFSVSPTGPSTKIKAEDPSGDSAPAAPPPPQPAQPHLPQAQLMLTGSQLAGDIQQLLQLQQLVLVPGHHLQPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQAVTRPTLPDPHLSHPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPASYSPHLVTPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGAAGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLSGLNPSTGPGLWWNPAPYQP", "length": 479, "header": "tr|A0A5G2Q901-1|A0A5G2Q901_PIG Isoform 1 of POU domain protein OS=Sus scrofa OX=9823 GN=POU2F2 PE=3 SV=2 CANONICAL=A0A5G2Q901-1" }, "isoforms": [ { "isoform_ac": "A0A287A4D6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A4D6/entry", "sequence": { "sequence": "PSHCALGEVIMSKPLEAEKQGLDSPSEHTDTERNGPDTNHQNPQNKTSPFSVSPTGPSTKIKAEDPSGDSAPAAPPPPQPAQPHLPQAQLMLTGSQLAGDIQQLLQLQQLVLVPGHHLQPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQAVTRPTLPDPHLSHPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAGGNWARAPGRAVGRGSRPLMPLFPPGHRDYVYKRPLPLCPQNQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPASYSPHLVTPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGAAGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLSGLNPSTGPGLWWNPAPYQP", "length": 468, "header": "tr|A0A287A4D6-1|A0A5G2Q901_PIG Computationally mapped isoform of POU domain protein OS=Sus scrofa OX=9823 GN=POU2F2 PE=3 SV=2 CANONICAL=A0A5G2Q901-1" }, "locus": { "chromosome": "6", "start_pos": 49825329, "end_pos": 49798416, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066242.3", "url": "https://www.ensembl.org/id/ENSSSCT00000066242.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038633.2", "url": "https://www.ensembl.org/id/ENSSSCP00000038633.2" } ] } }, { "isoform_ac": "A0A287AS11-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AS11/entry", "sequence": { "sequence": "MVHSSMGAPEIRMSKPLEAEKQGLDSPSEHTDTERNGPDTNHQNPQNKTSPFSVSPTGPSTKDIQQLLQLQQLVLVPGHHLQPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQAVTRPTLPDPHLSHPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPASYSPHLVTPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGAAGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLSGLNPSTGPGLWWNPAPYQP", "length": 440, "header": "tr|A0A287AS11-1|A0A5G2Q901_PIG Computationally mapped isoform of POU domain protein OS=Sus scrofa OX=9823 GN=POU2F2 PE=3 SV=1 CANONICAL=A0A5G2Q901-1" }, "locus": { "chromosome": "6", "start_pos": 49825329, "end_pos": 49792016, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058401.3", "url": "https://www.ensembl.org/id/ENSSSCT00000058401.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046852.1", "url": "https://www.ensembl.org/id/ENSSSCP00000046852.1" } ] } }, { "isoform_ac": "A0A287B2R7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B2R7/entry", "sequence": { "sequence": "MTQLFPQPRGAGSMVHSSMGAPEIRMSKPLEAEKQGLDSPSEHTDTERNGPDTNHQNPQNKTSPFSVSPTGPSTKIKAEDPSGDSAPAAPPPPQPAQPHLPQAQLMLTGSQLAGDIQQLLQLQQLVLVPGHHLQPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQAVTRPTLPDPHLSHPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPASYSPHLVTPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGAAGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLSGLNPSTGSTMVGLSSGLSPALMSNNPLATIQALASGGTLPLTSLDSSGNLVLGAAGAAPGSPGLVTSPLFLNHAGLPLLSAPPGVGLVSAAAAAVAASISSKSPGLSSSSSSSSSSSSSSSSTCSEAAAQTPGGPGGPEAGSKPE", "length": 618, "header": "tr|A0A287B2R7-1|A0A5G2Q901_PIG Computationally mapped isoform of POU domain protein OS=Sus scrofa OX=9823 GN=POU2F2 PE=3 SV=3 CANONICAL=A0A5G2Q901-1" }, "locus": { "chromosome": "6", "start_pos": 49825633, "end_pos": 49791977, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046415.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046415.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050711.3", "url": "https://www.ensembl.org/id/ENSSSCP00000050711.3" } ] } }, { "isoform_ac": "A0A5G2Q901-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q901/entry", "sequence": { "sequence": "MVHSSMGAPEIRMSKPLEAEKQGLDSPSEHTDTERNGPDTNHQNPQNKTSPFSVSPTGPSTKIKAEDPSGDSAPAAPPPPQPAQPHLPQAQLMLTGSQLAGDIQQLLQLQQLVLVPGHHLQPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQAVTRPTLPDPHLSHPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPASYSPHLVTPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGAAGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLSGLNPSTGPGLWWNPAPYQP", "length": 479, "header": "tr|A0A5G2Q901-1|A0A5G2Q901_PIG Isoform 1 of POU domain protein OS=Sus scrofa OX=9823 GN=POU2F2 PE=3 SV=2 CANONICAL=A0A5G2Q901-1" }, "locus": { "chromosome": "6", "start_pos": 49825329, "end_pos": 49792016, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083405.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083405.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060397.2", "url": "https://www.ensembl.org/id/ENSSSCP00000060397.2" } ] } }, { "isoform_ac": "A0A5G2QPV0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPV0/entry", "sequence": { "sequence": "MSKPLEAEKQGLDSPSEHTDTERNGPDTNHQNPQNKTSPFSVSPTGPSTKIKAEDPSGDSAPAAPPPPQPAQPHLPQAQLMLTGSQLAGLTALMPAQQQLLLQQAQAQLLAAAAAAAASSTSSSSSSSSSSSSSASSSTSQPPASSGGGDLPPPQPASQPPGTPQLTLSQPIQLTAQDIQQLLQLQQLVLVPGHHLQPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQAVTRPTLPDPHLSHPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPASYSPHLVTPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGAAGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLSGLNPSTGSTMVGLSSGLSPALMSNNPLATIQALASGGTLPLTSLDSSGNLVLGAAGAAPGSPGLVTSPLFLNHAGLPLLSAPPGVGLVSAAAAAVAASISSKSPGLSSSSSSSSSSSSSSSSTCSEAAAQTPGGPGGPEAGSKPE", "length": 681, "header": "tr|A0A5G2QPV0-1|A0A5G2Q901_PIG Computationally mapped isoform of POU domain protein OS=Sus scrofa OX=9823 GN=POU2F2 PE=3 SV=1 CANONICAL=A0A5G2Q901-1" }, "locus": { "chromosome": "6", "start_pos": 49825633, "end_pos": 49799457, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072814.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072814.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066745.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066745.1" } ] } }, { "isoform_ac": "A0A5G2QZP1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZP1/entry", "sequence": { "sequence": "MAKTAAPTDGSSEIRMSKPLEAEKQGLDSPSEHTDTERNGPDTNHQNPQNKTSPFSVSPTGPSTKIKAEDPSGDSAPAAPPPPQPAQPHLPQAQLMLTGSQLAGDIQQLLQLQQLVLVPGHHLQPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQAVTRPTLPDPHLSHPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPASYSPHLVTPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGAAGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLSGLNPSTGSRVAAASRVGSCTPNPVGGSLPLLMPLLCLLQKHNGGVELRAESSPHEQQPFGHYPRCVLPHVTPIVTSPVPWGLEPSPLLLQPCHPAPAHCIARLFIPISPLGKV", "length": 576, "header": "tr|A0A5G2QZP1-1|A0A5G2Q901_PIG Computationally mapped isoform of POU domain protein OS=Sus scrofa OX=9823 GN=POU2F2 PE=3 SV=1 CANONICAL=A0A5G2Q901-1" }, "locus": { "chromosome": "6", "start_pos": 49825187, "end_pos": 49748412, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000085832.1", "url": "https://www.ensembl.org/id/ENSSSCT00000085832.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070363.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070363.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 57, "start_aa": "Thr", "end_pos": 57, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr57", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287A4D6", "url": "https://www.uniprot.org/uniprotkb/A0A287A4D6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-6807505", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6807505", "resource": "Reactome", "description": "RNA polymerase II transcribes snRNA genes" } ], "orthologs": [ { "uniprot_canonical_ac": "A0ABK0LNT5-1", "protein_name": "POU domain protein", "gene_name": "Pou2f2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVHSSMGAPEIRMSKPLEAEKQSLDSPSEHTDTERNGPDINHQNPQNKASPFSVSPTGPSTKIKAEDPSGDSAPAAPPPPQPAQPHLPQAQLMLTGSQLAGLSALIPAQQQLLLQQAQAQLLAAAVQQSNAAAANAAAAAAAASTSSSTSSASSSTSQTPASSGGGDLPPSQPTSQPPGTPQLTLSQPIQLTAQDIQQLLQLQQLVLVPGHHLQPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQAMTRPTLPDPHLSHPQPSKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPTSYSPHLVTPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGGGGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLTGLNPSAGSTMVGLSSGLSPALMGNNPLATIQGACCLMSPHCHQSCPLLGLEAPSPLLPQPCHPALPLTALLACSSPSVFGEGVRVLLLGSQWDRQEMGCSGRVHRGQGLPGLMYLQLSLSFSSPALASGGTLPLTSLDSSGNLVLGAAGAAPGSPSLVTSPLFLNHTGLPLLSAPPGVGLVSAAAAAVAATISSKSPGLSSSSSSSSSSSTCSEVAAQTSGGPGGPEAGSKAE", "length": 786 }, "evidence": [ { "id": "A0A5G2Q901", "url": "https://omabrowser.org/oma/group/A0A5G2Q901/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P09086-1", "protein_name": "POU domain, class 2, transcription factor 2", "gene_name": "POU2F2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVHSSMGAPEIRMSKPLEAEKQGLDSPSEHTDTERNGPDTNHQNPQNKTSPFSVSPTGPSTKIKAEDPSGDSAPAAPLPPQPAQPHLPQAQLMLTGSQLAGDIQQLLQLQQLVLVPGHHLQPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQAVTRPTLPDPHLSHPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPASYSPHMVTPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGGGGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLSGLNPSTGPGLWWNPAPYQP", "length": 479 }, "evidence": [ { "id": "A0A5G2Q901", "url": "https://omabrowser.org/oma/group/A0A5G2Q901/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q00196-1", "protein_name": "POU domain, class 2, transcription factor 2", "gene_name": "Pou2f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVHSSMGAPEIRMSKPLEAEKQSLDSPSEHTDTERNGPDINHQNPQNKASPFSVSPTGPSTKIKAEDPSGDSAPAAPPPPQPAQPHLPQAQLMLTGSQLAGDIQQLLQLQQLVLVPGHHLQPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPTSYSPHLVTPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGGGGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLSGLNPSAGPGLWWNPAPYQP", "length": 463 }, "evidence": [ { "id": "A0A5G2Q901", "url": "https://omabrowser.org/oma/group/A0A5G2Q901/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 6, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q901", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q901" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q901", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q901" } ], "pmid": "" }, { "name": "protein domain specific binding", "id": "GO:0019904", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019904", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q901", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q901" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q901", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q901" } ], "pmid": "" }, { "name": "DNA-binding transcription activator activity, RNA polymerase II-specific", "id": "GO:0001228", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001228", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q901", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q901" } ], "pmid": "" }, { "name": "spermidine transmembrane transporter activity", "id": "GO:0015606", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015606", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q901", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q901" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q901", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q901" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q901", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q901" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q901", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q901" } ], "pmid": "" }, { "name": "positive regulation of interleukin-6 production", "id": "GO:0032755", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032755", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q901", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q901" } ], "pmid": "" }, { "name": "cellular response to virus", "id": "GO:0098586", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098586", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q901", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q901" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q901", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q901" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 248, "end_pos": 250, "annotation": "n_glycosylation_sequon" }, { "start_pos": 444, "end_pos": 446, "annotation": "n_glycosylation_sequon" }, { "start_pos": 47, "end_pos": 49, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2Q901-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 479, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2Q901-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2Q901" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2Q901", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q901" }, { "id": "PS50071", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50071" }, { "id": "PRU00108", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00108" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Homeobox", "eco_id": "ECO_0000259", "start_pos": 295, "end_pos": 355, "start_aa": "Gly", "end_aa": "Ile", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A5G2Q901", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q901" }, { "id": "PS51179", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51179" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "POU-specific", "eco_id": "ECO_0000259", "start_pos": 195, "end_pos": 269, "start_aa": "Glu", "end_aa": "Glu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 57 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 248, "end_pos": 250 }, { "start_pos": 444, "end_pos": 446 }, { "start_pos": 47, "end_pos": 49 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"MNELDSLRQEAESLKNAIRDARKAACDTSLLQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNMCSIYNLKTREGNVRVSRELPGHGGYLSCCRFLDDNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQCKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVTENGMAVATGSWDSFLRVWN", "length": 340 }, "evidence": [ { "id": "A0A4X1W8E1", "url": "https://omabrowser.org/oma/group/A0A4X1W8E1/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "P36408-1", "protein_name": "Guanine nucleotide-binding protein subunit beta", "gene_name": "gpbA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": 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"database": "UniProtKB", "id": "A0A4X1W8E1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W8E1" } ], "pmid": "" }, { "name": "GTPase binding", "id": "GO:0051020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051020", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W8E1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W8E1" } ], "pmid": "" }, { "name": "signaling receptor complex adaptor activity", "id": "GO:0030159", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030159", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W8E1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W8E1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W8E1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W8E1" } ], "pmid": "" }, { "name": "G protein-coupled receptor signaling pathway", "id": 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"database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10851", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10851", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10851:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10851:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01243", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01243", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF10590", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10590", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-964975", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-964975", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "15149", "url": "https://www.rhea-db.org/rhea/15149", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "15817", "url": "https://www.rhea-db.org/rhea/15817", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287BB89", "url": "https://www.uniprot.org/uniprotkb/A0A287BB89", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BB89-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BB89-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BDC6", "url": "https://www.uniprot.org/uniprotkb/A0A287BDC6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BDC6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BDC6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q828", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q828", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q828-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q828-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RWH7", "url": "https://www.uniprot.org/uniprotkb/F1RWH7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RWH7-1", "url": "https://www.uniprot.org/uniprotkb/F1RWH7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTCGLRGVIVTFGRPAQWPRYARHLCSRGAVMDLGPMRKSYCGEREAFEETQLTSLDPVKQFAAWFEEAVQCPAIGEANAMCLATCTRDGRPSARMVLLKGFGKDGFRFFTNFQSRKGKELVRLEGPVKKLPEEEAESYFHSRPRSSQIGAVVSHQSSVIPDREYLRKKNEELEQLYQEQEVPRPKYWGGYILYPQVIEFWQGQTNRLHDRIIFRRGPPTGDSPLGPMTHRGEEDWLYERLAP", "length": 243, "header": "tr|A0A5G2Q828-1|A0A5G2Q828_PIG Isoform 1 of Pyridoxine-5'-phosphate oxidase OS=Sus scrofa OX=9823 GN=PNPO PE=3 SV=1 CANONICAL=A0A5G2Q828-1" }, "isoforms": [ { "isoform_ac": "A0A287BB89-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BB89/entry", "sequence": { "sequence": "MTCGLRGVIVTFGRPAQWPRYARHLCSRGAVMDLGPMRKSYCGEREAFEETQLTSLDPVKQFAAWFEEAVQCPAIGEANAMCLATCTRDGRPSARMVLLKGFGKDGFRFFTNFQSRKGKELDSNPFASLVFYWEPLNRQVRLEGPVKKLPEEEAESYFHSRPRSSQIGAVVSHQSSVIPDREYLRKKNEELEQLYQEQEVPRPKYWGGYILYPQVIEFWQGQTNRLHDRIIFRRGPPTGDSPLGPMTHRGEEDWLYERLAP", "length": 261, "header": "tr|A0A287BB89-1|A0A5G2Q828_PIG Computationally mapped isoform of Pyridoxine-5'-phosphate oxidase OS=Sus scrofa OX=9823 GN=PNPO PE=3 SV=1 CANONICAL=A0A5G2Q828-1" }, "locus": { "chromosome": "12", "start_pos": 24198971, "end_pos": 24192983, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039118.3", "url": "https://www.ensembl.org/id/ENSSSCT00000039118.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053378.1", "url": "https://www.ensembl.org/id/ENSSSCP00000053378.1" } ] } }, { "isoform_ac": "A0A287BDC6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BDC6/entry", "sequence": { "sequence": "MTCGLRGVIVTFGRPAQWPRYARHLCSRGAVMDLGPMRKSYCGEREAFEETQLTSLDPVKQFAAWFEEAVQCPAIGEANAMCLATCTRDGRPSARMVLLKGFGKDGFRFFTNFQSRKGKELDSNPFASLVFYWEPLNRQYLRKKNEELEQLYQEQEVPRPKYWGGYILYPQVIEFWQGQTNRLHDRIIFRRGPPTGDSPLGPMTHRGEEDWLYERLAP", "length": 218, "header": "tr|A0A287BDC6-1|A0A5G2Q828_PIG Computationally mapped isoform of Pyridoxine-5'-phosphate oxidase OS=Sus scrofa OX=9823 GN=PNPO PE=3 SV=2 CANONICAL=A0A5G2Q828-1" }, "locus": { "chromosome": "12", "start_pos": 24198971, "end_pos": 24192983, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046443.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046443.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054525.2", "url": "https://www.ensembl.org/id/ENSSSCP00000054525.2" } ] } }, { "isoform_ac": "A0A5G2Q828-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q828/entry", "sequence": { "sequence": "MTCGLRGVIVTFGRPAQWPRYARHLCSRGAVMDLGPMRKSYCGEREAFEETQLTSLDPVKQFAAWFEEAVQCPAIGEANAMCLATCTRDGRPSARMVLLKGFGKDGFRFFTNFQSRKGKELVRLEGPVKKLPEEEAESYFHSRPRSSQIGAVVSHQSSVIPDREYLRKKNEELEQLYQEQEVPRPKYWGGYILYPQVIEFWQGQTNRLHDRIIFRRGPPTGDSPLGPMTHRGEEDWLYERLAP", "length": 243, "header": "tr|A0A5G2Q828-1|A0A5G2Q828_PIG Isoform 1 of Pyridoxine-5'-phosphate oxidase OS=Sus scrofa OX=9823 GN=PNPO PE=3 SV=1 CANONICAL=A0A5G2Q828-1" }, "locus": { "chromosome": "12", "start_pos": 24198971, "end_pos": 24192983, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072575.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072575.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060006.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060006.1" } ] } }, { "isoform_ac": "F1RWH7-1", "url": "https://www.uniprot.org/uniprotkb/F1RWH7/entry", "sequence": { "sequence": "MAFEETQLTSLDPVKQFAAWFEEAVQCPAIGEANAMCLATCTRDGRPSARMVLLKGFGKDGFRFFTNFQSRKGKELDSNPFASLVFYWEPLNRQVRLEGPVKKLPEEEAESYFHSRPRSSQIGAVVSHQSSVIPDREYLRKKNEELEQLYQEQEVPRPKYWGGYILYPQVIEFWQGQTNRLHDRIIFRRGPPTGDSPLGPMTHRGEEDWLYERLAP", "length": 216, "header": "tr|F1RWH7-1|A0A5G2Q828_PIG Computationally mapped isoform of Pyridoxine-5'-phosphate oxidase OS=Sus scrofa OX=9823 GN=PNPO PE=3 SV=3 CANONICAL=A0A5G2Q828-1" }, "locus": { "chromosome": "12", "start_pos": 24198971, "end_pos": 24193454, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000019077.5", "url": "https://www.ensembl.org/id/ENSSSCT00000019077.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000018571.3", "url": "https://www.ensembl.org/id/ENSSSCP00000018571.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB89", "url": "https://www.uniprot.org/uniprotkb/A0A287BB89" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100521112", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521112", "resource": "KEGG Pathway" }, { "id": "R-SSC-964975", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-964975", "resource": "Reactome", "description": "Vitamin B6 activation to pyridoxal phosphate" } ], "orthologs": [ { "uniprot_canonical_ac": "G3H5U1-1", "protein_name": "Pyridoxine-5'-phosphate oxidase", "gene_name": "Pnpo", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTCALLSVTATFGRPSKWPGYLRHLCCRGAVMDLGPMRKSYRGDREAFEEAHLTSLDPMKQFASWFEEAVQCPDIGEANAMCLATCTRDGKPSARMLLLKGFGKDGFRFFTNYESRKGKELDSNPFASLVFYWEPLNRQVRVEGPVKKLPEKEAEDYFHSRPKSSQIGAVVSRQSSVIPDREYLRKKNKELEQLYQEQEVPKPEYWGGYILYPQVMEFWQGQTNRLHDRIVFRRGLTTGDSLLGPMTHHGEEDWVYERLAP", "length": 261 }, "evidence": [ { "id": "A0A5G2Q828", "url": "https://omabrowser.org/oma/group/A0A5G2Q828/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "O88794-1", "protein_name": "Pyridoxine-5'-phosphate oxidase", "gene_name": "Pnpo", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTCGLLSVTVTFRRPAKWPGYFRHLCCRGAVMDLGPMRKSYRGDREAFEEAHLTSLDPMKQFASWFEEAVQCPDIGEANAMCLATCTRDGKPSARMLLLKGFGKDGFRFFTNYESRKGKELDSNPFASLVFYWEPLNRQVRVEGPVKKLPEKEAENYFHSRPKSSQIGAVVSRQSSVIPDREYLRKKNEELGQLYREQEVPKPEYWGGYILYPQVMEFWQGQTNRLHDRIVFRRGLATGDSPLGPMTHHGEEDWVYERLAP", "length": 261 }, "evidence": [ { "id": "A0A5G2Q828", "url": "https://omabrowser.org/oma/group/A0A5G2Q828/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P38075-1", "protein_name": "Pyridoxamine 5'-phosphate oxidase", "gene_name": "PDX3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTKQAEETQKPIIFAPETYQYDKFTLNEKQLTDDPIDLFTKWFNEAKEDPRETLPEAITFSSAELPSGRVSSRILLFKELDHRGFTIYSNWGTSRKAHDIATNPNAAIVFFWKDLQRQVRVEGITEHVNRETSERYFKTRPRGSKIGAWASRQSDVIKNREELDELTQKNTERFKDAEDIPCPDYWGGLRIVPLEIEFWQGRPSRLHDRFVYRRKTENDPWKVVRLAP", "length": 228 }, "evidence": [ { "id": "A0A5G2Q828", "url": "https://omabrowser.org/oma/group/A0A5G2Q828/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q54YS6-1", "protein_name": "Pyridoxine-5'-phosphate oxidase", "gene_name": "pnpo", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSINLDNEELKNEDLVANMRKDYRMGELKEEGLLESPFKMFDMWLTQEIELKNEGAEPNAFTLATCSIERKPSARVVLLKHFDHQGFVFYTNYNSRKSKELSENPFASMTFLWTQKQVRIEGSVEKVDRLESEKYFKSRPRSSQIGAWVSEFQSSEVTKQHLEEKTIEMENKFKDQEVPLPPFWGGWRIKPYAFEFWQGKSGRIHDRFKYVPTDSNNDNWITKRLSP", "length": 227 }, "evidence": [ { "id": "A0A5G2Q828", "url": "https://omabrowser.org/oma/group/A0A5G2Q828/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q5E9K3-1", "protein_name": "Pyridoxine-5'-phosphate oxidase", "gene_name": "PNPO", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MIFWLRSVIVTFGRPAEWPRCLRHLCSRGAAMDLGPMRKTYRGDPEAFEETHLTSLDPVKQFAAWFEEAVQCPDIMEANAMCLATCTRDGKPSARMVLLKGFGKDGFRFFTNFESRKGKELDSNPFASLVFYWEPLHRQVRVEGPVKKLPEEEAECYFHSRPKSSQIGAVVSHQSSVIPDREYLRKKNKELEQLYQEQEVPKPKYWGGYILYPQVMEFWQGQTNRLHDRIVFRRGLLTGDSPLGPMTHRGEEDWVYERLAP", "length": 261 }, "evidence": [ { "id": "A0A5G2Q828", "url": "https://omabrowser.org/oma/group/A0A5G2Q828/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q91XF0-1", "protein_name": "Pyridoxine-5'-phosphate oxidase", "gene_name": "Pnpo", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTCGLLSVTVTFRRPAKWTGYLRHLCCRGAVMDLGPMRKSYRGDREAFEETHLTSLDPMKQFASWFDEAVQCPDIGEANAMCVATCTRDGKPSARMLLLKGFGKDGFRFFTNYESRKGKELDSNPFASLVFYWEPLNRQVRVEGPVKKLPEKEAENYFHSRPKSSQIGAVVSRQSSVIPDREYLRKKNEELGQLYQDQEVPKPEYWGGYILYPQVMEFWQGQTNRLHDRIVFRRGLATGDSPLGPMTHHGEEDWVYERLAP", "length": 261 }, "evidence": [ { "id": "A0A5G2Q828", "url": "https://omabrowser.org/oma/group/A0A5G2Q828/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NVS9-1", "protein_name": "Pyridoxine-5'-phosphate oxidase", "gene_name": "PNPO", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTCWLRGVTATFGRPAEWPGYLSHLCGRSAAMDLGPMRKSYRGDREAFEETHLTSLDPVKQFAAWFEEAVQCPDIGEANAMCLATCTRDGKPSARMLLLKGFGKDGFRFFTNFESRKGKELDSNPFASLVFYWEPLNRQVRVEGPVKKLPEEEAECYFHSRPKSSQIGAVVSHQSSVIPDREYLRKKNEELEQLYQDQEVPKPKSWGGYVLYPQVMEFWQGQTNRLHDRIVFRRGLPTGDSPLGPMTHRGEEDWLYERLAP", "length": 261 }, "evidence": [ { "id": "A0A5G2Q828", "url": "https://omabrowser.org/oma/group/A0A5G2Q828/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VHZ5-1", "protein_name": "pyridoxal 5'-phosphate synthase", "gene_name": "sgll", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MKLLQTIRRMSQGASEVPLSALRLKYCERKDAFLEDNIKVKNPFCVFRDWLELALKTPEILEPNAAALATVSAEGRPSNRYVLVKEATAEGFTFFTNYGSRKAEDIKSNPYVAISFYWLPLRRSVRIEGVAEKISVEDSLKYFHQRPRASQIGAAASPQSQRIPSRSYLDDVEAAIKLELGPDGEVPLPNWGGYLVRPDLIEFWQGQTDRLHDRIRFRRGGGVESEVDSKLVHKGEDGWVYERLAP", "length": 246 }, "evidence": [ { "id": "A0A5G2Q828", "url": "https://omabrowser.org/oma/group/A0A5G2Q828/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q828", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q828" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "pyridoxal phosphate binding", "id": "GO:0030170", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030170", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q828", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q828" } ], "pmid": "" }, { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q828", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q828" } ], "pmid": "" }, { "name": "FMN binding", "id": "GO:0010181", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010181", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q828", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q828" } ], "pmid": "" }, { "name": "pyridoxamine phosphate oxidase activity", "id": "GO:0004733", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004733", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q828", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q828" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "pyridoxine biosynthetic process", "id": "GO:0008615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008615", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q828", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q828" } ], "pmid": "" }, { "name": "pyridoxal phosphate biosynthetic process", "id": "GO:0042823", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042823", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q828", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q828" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "15149", "name": "", "equation": "pyridoxine 5'-phosphate + O2 = pyridoxal 5'-phosphate + H2O2", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "15149", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/15149" } ] }, { "id": "15817", "name": "", "equation": "pyridoxamine 5'-phosphate + O2 + H2O = pyridoxal 5'-phosphate + H2O2 + NH4(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "15817", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/15817" } ] }, { "id": "R-SSC-965019", "name": "2xPNPO:2xFMN oxidizes PDXP to PXLP", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [ "R-ALL-964952" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-965019", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-965019" } ] }, { "id": "R-SSC-965079", "name": "2xPNPO:2xFMN oxidizes PXAP to PXLP", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [ "R-ALL-965146" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-965079", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-965079" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-964952", "participant_name": "PDXP [cytosol]", "crossref": [ { "id": "28803", "database": "ChEBI", "url": "" }, { "id": "C00627", "database": "COMPOUND", "url": "" }, { "id": "ZINC000001532705", "database": "ZINC", "url": "" }, { "id": "HMDB0001319", "database": "HMDB Metabolite", "url": "" } ] }, { "participant_id": "R-ALL-965146", "participant_name": "PXAP [cytosol]", "crossref": [ { "id": "18335", "database": "ChEBI", "url": "" }, { "id": "C00647", "database": "COMPOUND", "url": "" }, { "id": "ZINC000001532708", "database": "ZINC", "url": "" }, { "id": "HMDB0001555", "database": "HMDB Metabolite", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2Q828-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 243, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2Q828-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2Q828" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2Q828", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q828" }, { "id": "PF01243", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01243" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Pyridoxamine 5'-phosphate oxidase N-terminal", "eco_id": "ECO_0000259", "start_pos": 75, "end_pos": 176, "start_aa": "Ile", "end_aa": "Leu", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A5G2Q828", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q828" }, { "id": "PF10590", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10590" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Pyridoxine 5'-phosphate oxidase dimerisation C-terminal", "eco_id": "ECO_0000259", "start_pos": 188, "end_pos": 243, "start_aa": "Trp", "end_aa": "Pro", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QFE8-1", "uniprot_ac": "A0A5G2QFE8", "uniprot_id": "A0A5G2QFE8_PIG", "mass": { "chemical_mass": 79297.0, "monoisotopic_mass": 79297.0 }, "refseq": {}, "gene_names": [ { "name": "FOXP2", "type": "recommended", "evidence": [ { "id": "A0A5G2QFE8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFE8" } ] } ], "protein_names": [ { "name": "Forkhead box P2", "type": "synonym", "evidence": [ { "id": "A0A5G2QFE8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFE8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFE8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFE8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "FOXP2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFE8", "locus": { "chromosome": "18", "start_pos": 31335264, "end_pos": 31888845, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016639", "url": "https://www.ensembl.org/id/ENSSSCG00000016639" } ] } } ], "crossref": [ { "id": "A0A5G2QFE8", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QFE8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000016639", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016639", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd20065", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd20065", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100127352", "url": "https://www.ncbi.nlm.nih.gov/gene/100127352", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001766", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001766", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR030456", "url": "https://www.ebi.ac.uk/interpro/entry/IPR030456", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032354", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032354", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036388", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036388", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036390", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036390", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047412", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047412", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050998", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050998", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR45796", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45796", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45796:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45796:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00250", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00250", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16159", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16159", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287BGC0", "url": "https://www.uniprot.org/uniprotkb/A0A287BGC0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BGC0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BGC0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFE8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFE8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFE8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFE8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QN29", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QN29", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QN29-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QN29-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QVF0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QVF0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QVF0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QVF0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SJC3", "url": "https://www.uniprot.org/uniprotkb/F1SJC3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SJC3-1", "url": "https://www.uniprot.org/uniprotkb/F1SJC3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMQESATETISNSSMNQNGMSTLSSQLDAGSRDGRSSGDTSSEVSTVELLHLQQQQALQAARQLLLQQQTSGLKSPKSSDKQRPLQVPVSVAMMTPQVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAALPVQSLPQAGLSPAEIQQLWKEVTGVHSMDDNGIKHGGLDLTTNNSSSTTSSTTSKASPPITHHSIVNGQSSVLNARRDSSSHEETGASHTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKERERLQAMMTHLHMRPSEPKPSPKPLNLVSSVTMSKNMLETSPQSLPQTPTTPTAPVTPITQGPSVITPASVPNVGAIRRRHSDKYNIPMSSEIAPNYEFYKNADVRPPFTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVEYQKRRSQKITGSPTLVKNIPTSLGYGAALNASLQAALAESSLPLLSNPGLINNASSGLLQAVHEDLNGSLDHLDSNGNSSPGCSPQPHIHSIHVKEEPVMAEDEDCPMSLVTTANHSPELEDDREIEEEPLSEDLE", "length": 710, "header": "tr|A0A5G2QFE8-1|A0A5G2QFE8_PIG Isoform 1 of Forkhead box P2 OS=Sus scrofa OX=9823 GN=FOXP2 PE=4 SV=2 CANONICAL=A0A5G2QFE8-1" }, "isoforms": [ { "isoform_ac": "A0A287BGC0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BGC0/entry", "sequence": { "sequence": "MMQESATETISNSSMNQNGMSTLSSQLDAGSRDGRSSGDTSSEVSTVELLHLQQQQALQAARQLLLQQQTSGLKSPKSSDKQRPLQELLPETKLCVCGHSSGDGHPHNTFAVPVSVAMMTPQVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAALPVQSLPQAGLSPAEIQQLWKEVTGVHSMDDNGIKHGGLDLTTNNSSSTTSSTTSKASPPITHHSIVNGQSSVLNARRDSSSHEETGASHTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKERERLQAMMTHLHMRPSEPKPSPKPLNLVSSVTMSKNMLETSPQSLPQTPTTPTAPVTPITQGPSVITPASVPNVGAIRRRHSDKYNIPMSSEIAPNYEFYKNADVRPPFTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVEYQKRRSQKITGSPTLVKNIPTSLGYGAALNASLQAALAESSLPLLSNPGLINNASSGLLQAVHEDLNGSLDHLDSNGNSSPGCSPQPHIHSIHVKEEPVMAEDEDCPMSLVTTANHSPELEDDREIEEEPLSEDLE", "length": 734, "header": "tr|A0A287BGC0-1|A0A5G2QFE8_PIG Computationally mapped isoform of Forkhead box P2 OS=Sus scrofa OX=9823 GN=FOXP2 PE=4 SV=2 CANONICAL=A0A5G2QFE8-1" }, "locus": { "chromosome": "18", "start_pos": 31589372, "end_pos": 31339003, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049099.2", "url": "https://www.ensembl.org/id/ENSSSCT00000049099.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055635.2", "url": "https://www.ensembl.org/id/ENSSSCP00000055635.2" } ] } }, { "isoform_ac": "A0A5G2QFE8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFE8/entry", "sequence": { "sequence": "MMQESATETISNSSMNQNGMSTLSSQLDAGSRDGRSSGDTSSEVSTVELLHLQQQQALQAARQLLLQQQTSGLKSPKSSDKQRPLQVPVSVAMMTPQVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAALPVQSLPQAGLSPAEIQQLWKEVTGVHSMDDNGIKHGGLDLTTNNSSSTTSSTTSKASPPITHHSIVNGQSSVLNARRDSSSHEETGASHTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKERERLQAMMTHLHMRPSEPKPSPKPLNLVSSVTMSKNMLETSPQSLPQTPTTPTAPVTPITQGPSVITPASVPNVGAIRRRHSDKYNIPMSSEIAPNYEFYKNADVRPPFTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVEYQKRRSQKITGSPTLVKNIPTSLGYGAALNASLQAALAESSLPLLSNPGLINNASSGLLQAVHEDLNGSLDHLDSNGNSSPGCSPQPHIHSIHVKEEPVMAEDEDCPMSLVTTANHSPELEDDREIEEEPLSEDLE", "length": 710, "header": "tr|A0A5G2QFE8-1|A0A5G2QFE8_PIG Isoform 1 of Forkhead box P2 OS=Sus scrofa OX=9823 GN=FOXP2 PE=4 SV=2 CANONICAL=A0A5G2QFE8-1" }, "locus": { "chromosome": "18", "start_pos": 31589372, "end_pos": 31339003, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076338.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076338.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060768.2", "url": "https://www.ensembl.org/id/ENSSSCP00000060768.2" } ] } }, { "isoform_ac": "A0A5G2QN29-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QN29/entry", "sequence": { "sequence": "MMQESATETISNSSMNQNGMSTLSSQLDAGSRDGRSSGDTSSEVSTVELLHLQQQQALQAARQLLLQQQTSGLKSPKSSDKQRPLQVPVSVAMMTPQVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQQDVLDSGLESFRDALGKNQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAALPVQSLPQAGLSPAEIQQLWKEVTGVHSMDDNGIKHGGLDLTTNNSSSTTSSTTSKASPPITHHSIVNGQSSVLNARRDSSSHEETGASHTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKERERLQAMMTHLHMRPSEPKPSPKPLNLVSSVTMSKNMLETSPQSLPQTPTTPTAPVTPITQGPSVITPASVPNVGAIRRRHSDKYNIPMSSEIAPNYEFYKNADVRPPFTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVEYQKRRSQKITGSPTLVKNIPTSLGYGAALNASLQAALAESSLPLLSNPGLINNASSGLLQAVHEDLNGSLDHLDSNGNSSPGCSPQPHIHSIHVKEEPVMAEDEDCPMSLVTTANHSPELEDDREIEEEPLSEDLE", "length": 726, "header": "tr|A0A5G2QN29-1|A0A5G2QN29_PIG Computationally mapped isoform of Forkhead box P2 OS=Sus scrofa OX=9823 GN=FOXP2 PE=4 SV=2 CANONICAL=A0A5G2QFE8-1" }, "locus": { "chromosome": "18", "start_pos": 31589372, "end_pos": 31339003, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087436.2", "url": "https://www.ensembl.org/id/ENSSSCT00000087436.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066297.2", "url": "https://www.ensembl.org/id/ENSSSCP00000066297.2" } ] } }, { "isoform_ac": "A0A5G2QVF0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QVF0/entry", "sequence": { "sequence": "MMQESATETISNSSMNQNGMSTLSSQLDAGSRDGRSSGDTSSEVSTVELLHLQQQQALQAARQLLLQQQTSGLKSPKSSDKQRPLQELLPETKLCVCGHSSGDGHPHNTFAVPVSVAMMTPQVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAALPVQSLPQAGLSPAEIQQLWKEVTGVHSMDDNGIKHGGLDLTTNNSSSTTSSTTSKASPPITHHSIVNGQSSVLNARRDSSSHEETGASHTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKERERLQAMMTHLHMRPSEPKPSPKPAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVEYQKRRSQKITGSPTLVKNIPTSLGYGAALNASLQAALAESSLPLLSNPGLINNASSGLLQAVHEDLNGSLDHLDSNGNSSPGCSPQPHIHSIHVKEEPVMAEDEDCPMSLVTTANHSPELEDDREIEEEPLSEDLE", "length": 641, "header": "tr|A0A5G2QVF0-1|A0A5G2QFE8_PIG Computationally mapped isoform of Forkhead box P2 OS=Sus scrofa OX=9823 GN=FOXP2 PE=4 SV=2 CANONICAL=A0A5G2QFE8-1" }, "locus": { "chromosome": "18", "start_pos": 31589372, "end_pos": 31339003, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071418.2", "url": "https://www.ensembl.org/id/ENSSSCT00000071418.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068100.2", "url": "https://www.ensembl.org/id/ENSSSCP00000068100.2" } ] } }, { "isoform_ac": "F1SJC3-1", "url": "https://www.uniprot.org/uniprotkb/F1SJC3/entry", "sequence": { "sequence": "MMQESATETISNSSMNQNGMSTLSSQLDAGSRDGRSSGDTSSEVSTVELLHLQQQHLVMPTLSPSGSVKVPVSVAMMTPQVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAALPVQSLPQAGLSPAEIQQLWKEVTGVHSMDDNGIKHGGLDLTTNNSSSTTSSTTSKASPPITHHSIVNGQSSVLNARRDSSSHEETGASHTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKERERLQAMMTHLHMRPSEPKPSPKPLNLVSSVTMSKNMLETSPQSLPQTPTTPTAPVTPITQGPSVITPASVPNVGAIRRRHSDKYNIPMSSEIAPNYEFYKNADVRPPFTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVEYQKRRSQKITGSPTLVKNIPTSLGYGAALNASLQAALAESSLPLLSNPGLINNASSGLLQAVHEDLNGSLDHLDSNGNSSPGCSPQPHIHSIHVKEEPVMAEDEDCPMSLVTTANHSPELEDDREIEEEPLSEDLE", "length": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2Q9B0-1", "uniprot_ac": "A0A5G2Q9B0", "uniprot_id": "A0A5G2Q9B0_PIG", "mass": { "chemical_mass": 55578.0, "monoisotopic_mass": 55578.0 }, "refseq": {}, "gene_names": [ { "name": "SACM1L", "type": "recommended", "evidence": [ { "id": "A0A5G2Q9B0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9B0" } ] } ], "protein_names": [ { "name": "Phosphatidylinositol-3-phosphatase SAC1", "type": "recommended", "evidence": [ { "id": "A0A5G2Q9B0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9B0/entry#names_and_taxonomy" } ] }, { "name": "3.1.3.64", "type": "synonym", "evidence": [ { "id": "A0A5G2Q9B0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9B0/entry#names_and_taxonomy" } ] }, { "name": "Phosphatidylinositol-4-phosphate phosphatase", "type": "synonym", "evidence": [ { "id": "A0A5G2Q9B0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9B0/entry#names_and_taxonomy" } ] }, { "name": "Suppressor of actin mutations 1-like protein", "type": "synonym", "evidence": [ { "id": "A0A5G2Q9B0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9B0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9B0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9B0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SACM1L", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9B0", "locus": { "chromosome": "13", "start_pos": 28891685, "end_pos": 28817132, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000027176", "url": "https://www.ensembl.org/id/ENSSSCG00000027176" } ] } } ], "crossref": [ { "id": "A0A5G2Q9B0", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2Q9B0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000027176", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000027176", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100621788", "url": "https://www.ncbi.nlm.nih.gov/gene/100621788", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002013", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002013", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100621788", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621788", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ITKAQPV", "url": "https://omabrowser.org/oma/group/ITKAQPV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LJB6", "url": "https://www.orthodb.org/?gene=I3LJB6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR45662", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45662", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45662:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45662:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02383", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02383", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-1483248", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1483248", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-1660514", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1660514", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "12316", "url": "https://www.rhea-db.org/rhea/12316", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "55652", "url": "https://www.rhea-db.org/rhea/55652", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2Q9B0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9B0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q9B0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9B0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QH54", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QH54", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QH54-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QH54-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QHW6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHW6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QHW6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHW6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDG0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDG0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDG0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDG0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FF14", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF14", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FF14-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF14-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FLF2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FLF2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FLF2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FLF2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FMX1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FMX1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FMX1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FMX1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LJB6", "url": "https://www.uniprot.org/uniprotkb/I3LJB6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LJB6-1", "url": "https://www.uniprot.org/uniprotkb/I3LJB6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLHLTDIQLQDNKTFLAMINHVLSVDGFYFSTTYDLTHTLQRLSNTSPEFQEMSLLERADQRFVWNGHLLRELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRGIDSEGHAANFVETEQIVHYNGSRASFVQTRGSIPLYWSQRPNLKYKPRPLINKVANHMDGFQRHFDSQVIIYGRQIIINLVNQKGSEKPLEQAFATMVSSLASGMIRYIAFDFHKECKNMRWDRLSILVDQVAEMQDELSYFLVDPAGKVLTNQEGVFRSNCMDCLDRTNVIQSLLARRSLQAQLQRLGVLHVGQKLEEQDEFEKIYKNAWADNANACAKQYAGTGALKTDFTRTGKRTQLGLIMDGWNSLIRYYKNNFSDGFRQDSIDLFLGNYSVDELDSHSPLSVPRDLKFLALPIIMVVAFSMCIICLLMAGDTWTETLAYVLFWGVASIGTFFIILYNGKDFVDAPRLVQKEKID", "length": 484, "header": "tr|A0A5G2Q9B0-1|A0A5G2Q9B0_PIG Isoform 1 of Phosphatidylinositol-3-phosphatase SAC1 OS=Sus scrofa OX=9823 GN=SACM1L PE=1 SV=2 CANONICAL=A0A5G2Q9B0-1" }, "isoforms": [ { "isoform_ac": "A0A5G2Q9B0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9B0/entry", "sequence": { "sequence": "MLHLTDIQLQDNKTFLAMINHVLSVDGFYFSTTYDLTHTLQRLSNTSPEFQEMSLLERADQRFVWNGHLLRELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRGIDSEGHAANFVETEQIVHYNGSRASFVQTRGSIPLYWSQRPNLKYKPRPLINKVANHMDGFQRHFDSQVIIYGRQIIINLVNQKGSEKPLEQAFATMVSSLASGMIRYIAFDFHKECKNMRWDRLSILVDQVAEMQDELSYFLVDPAGKVLTNQEGVFRSNCMDCLDRTNVIQSLLARRSLQAQLQRLGVLHVGQKLEEQDEFEKIYKNAWADNANACAKQYAGTGALKTDFTRTGKRTQLGLIMDGWNSLIRYYKNNFSDGFRQDSIDLFLGNYSVDELDSHSPLSVPRDLKFLALPIIMVVAFSMCIICLLMAGDTWTETLAYVLFWGVASIGTFFIILYNGKDFVDAPRLVQKEKID", "length": 484, "header": "tr|A0A5G2Q9B0-1|A0A5G2Q9B0_PIG Isoform 1 of Phosphatidylinositol-3-phosphatase SAC1 OS=Sus scrofa OX=9823 GN=SACM1L PE=1 SV=2 CANONICAL=A0A5G2Q9B0-1" }, "locus": { "chromosome": "13", "start_pos": 28889963, "end_pos": 28847933, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000073854.2", "url": "https://www.ensembl.org/id/ENSSSCT00000073854.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060522.2", "url": "https://www.ensembl.org/id/ENSSSCP00000060522.2" } ] } }, { "isoform_ac": "A0A5G2QH54-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QH54/entry", "sequence": { "sequence": "LLSLLDLQDNKTFLAMINHVLSVDGFYFSTTYDLTHTLQRLSNTSPEFQEMSLLERADQRFVWNGHLLRELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRGIDSEGHAANFVETEQIVHYNGSRASFVQTRGSIPLYWSQRPNLKYKPRPLINKVANHMDGFQRHFDSQVIIYGRQIIINLVNQKGSEKPLEQAFATMVSSLASGMIRYIAFDFHKECKNMRWDRLSILVDQVAEMQDELSYFLVDPAGKVLTNQEGVFRSNCMDCLDRTNVIQSLLARRSLQAQLQRLGVLHVGQKLEEQDEFEKIYKNAWADNANACAKQYAGTGALKTDFTRTGKRTQLGLIMDGWNSLIRYYKNNFSDGFRQDSIDLFLGNYSVDELDSHSPLSVPRDLKFLALPIIMVVAFSMCIICLLMAGDTWTETLAYVLFWGVASIGTFFIILYNGKDFVDAPRLVQKEKID", "length": 482, "header": "tr|A0A5G2QH54-1|A0A5G2QH54_PIG Computationally mapped isoform of Phosphatidylinositol-3-phosphatase SAC1 OS=Sus scrofa OX=9823 GN=SACM1L PE=1 SV=2 CANONICAL=A0A5G2Q9B0-1" }, "locus": { "chromosome": "13", "start_pos": 28889963, "end_pos": 28853270, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087664.2", "url": "https://www.ensembl.org/id/ENSSSCT00000087664.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063154.2", "url": "https://www.ensembl.org/id/ENSSSCP00000063154.2" } ] } }, { "isoform_ac": "A0A5G2QHW6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHW6/entry", "sequence": { "sequence": "MIFLYESNWWFYSKLKPYQHTTPEKFYVEACDDGADDVLIIDRVSTEVTLSVKKDIPPSAVTRPIFGILGTIHLVAGNYLIVITKKKKIGEFFNHVIWKATDFDVLSYKKTMLHLTDIQLQDNKTFLAMINHVLSVDGFYFSTTYDLTHTLQRLSNTSPEFQEMSLLERADQRFVWNGHLLRELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRGIDSEGHAANFVETEQIVHYNGSRASFVQTRGSIPLYWSQRPNLKYKPRPLINKVANHMDGFQRHFDSQVIIYGRQIIINLVNQKGSEKPLEQAFATMVSSLASGMIRYIAFDFHKECKNMRWDRLSILVDQVAEMQDELSYFLVDPAGKVLTNQEGVFRSNCMDCLDRTNVIQSLLARRSLQAQLQRLGVLHVGQKLEEQDEFEKIYKNAWADNANACAKQYAGTGALKTDFTRTGKRTQLGLIMDGWNSLIRYYKNNFSDGFRQDSIDLFLGNYSVDELDSHSPLSVPRDLKFLALPIIMVVAFSMCIICLLMAGDTWTETLAYVLFWGVASIGTFFIILYNGKDFVDAPRLVQKEKID", "length": 595, "header": "tr|A0A5G2QHW6-1|A0A5G2QHW6_PIG Computationally mapped isoform of Phosphatidylinositol-3-phosphatase SAC1 OS=Sus scrofa OX=9823 GN=SACM1L PE=1 SV=1 CANONICAL=A0A5G2Q9B0-1" }, "locus": { "chromosome": "13", "start_pos": 28889963, "end_pos": 28842590, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082862.1", "url": "https://www.ensembl.org/id/ENSSSCT00000082862.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061583.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061583.1" } ] } }, { "isoform_ac": "A0A8W4FDG0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDG0/entry", "sequence": { "sequence": "FKFLLRHTTPEKFYVEACDDGADDVLIIDRVSTEVTLSVKKDIPPSAVTRPIFGILGTIHLVAGNYLIVITKKKKIGEFFNHVIWKATDFDVLSYKKTMLHLTDIQLQDNKTFLAMINHVLSVDGFYFSTTYDLTHTLQRLSNTSPEFQEMSLLERADQRFVWNGHLLRELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRGIDSEGHAANFVETEQIVHYNGSRASFVQTRGSIPLYWSQRPNLKYKPRPLINKVANHMDGFQRHFDSQVIIYGRQIIINLVNQKGSEKPLEQAFATMVSSLASGMIRYIAFDFHKECKNMRWDRLSILVDQVAEMQDELSYFLVDPAGKVLTNQEGVFRSNCMDCLDRTNVIQSLLARRSLQAQLQRLGVLHVGQKLEEQDEFEKIYKNAWADNANACAKQYAGTGALKTDFTRTGKRTQLGLIMDGWNSLIRYYKNNFSDGFRQDSIDLFLGNYSVDELDSHSPLSVPRDLKFLALPIIMVVAFSMCIICLLMAGHRESSAKDCSVTPGQKHWPMCSSGELQALEHFLSFFTMAKILSMLPDWSKKKR", "length": 591, "header": "tr|A0A8W4FDG0-1|A0A5G2Q9B0_PIG Computationally mapped isoform of Phosphatidylinositol-3-phosphatase SAC1 OS=Sus scrofa OX=9823 GN=SACM1L PE=1 SV=1 CANONICAL=A0A5G2Q9B0-1" }, "locus": { "chromosome": "13", "start_pos": 28889958, "end_pos": 28842805, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000104304.1", "url": "https://www.ensembl.org/id/ENSSSCT00000104304.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076894.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076894.1" } ] } }, { "isoform_ac": "A0A8W4FF14-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF14/entry", "sequence": { "sequence": "MAATTYERLKLHTTPEKFYVEACDDGADDVLIIDRVSTEVTLSVKKDIPPSAVTRPIFGILGTIHLVAGNYLIVITKKKKIGEFFNHVIWKATDFDVLSYKKTMLHLTDIQLQDNKTFLAMINHVLSVDGFYFSTTYDLTHTLQRLSNTSPEFQEMSLLERADQRFVWNGHLLRELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRGIDSEGHAANFVETEQIVHYNGSRASFVQTRGSIPLYWSQRPNLKYKPRPLINKVANHMDGFQRHFDSQVIIYGRQIIINLVNQKGSEKPLEQAFATMVSSLASGMIRYIAFDFHKECKNMRWDRLSILVDQVAEMQDELSYFLVDPAGKVLTNQEGVFRSNCMDCLDRTNVIQSLLARRSLQAQLQRLGVLHVGQKLEEQDEFEKIYKNAWADNANACAKQYAGTGALKTDFTRTGKRTQLGLIMDGWNSLIRYYKNNFSDGFRQDSIDLFLGNYSVDELDSHSPLSVPRDLKFLALPIIMVVAFSMCIICLLMAGDTWTETLAYVLFWGVASIGTFFIILYNGKDFVDAPRLVQKEKIDICVCGKRLGLEDSIMQNWSLY", "length": 608, "header": "tr|A0A8W4FF14-1|A0A5G2Q9B0_PIG Computationally mapped isoform of Phosphatidylinositol-3-phosphatase SAC1 OS=Sus scrofa OX=9823 GN=SACM1L PE=1 SV=1 CANONICAL=A0A5G2Q9B0-1" }, "locus": { "chromosome": "13", "start_pos": 28890029, "end_pos": 28817244, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093670.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093670.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077835.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077835.1" } ] } }, { "isoform_ac": "A0A8W4FLF2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FLF2/entry", "sequence": { "sequence": "MAATTYERLKLHTTPEKFYVEACDDGADDVLIIDRVSTEVTLSVKKDIPPSAVTRPIFGILGTIHLVAGNYLIVITKKKKIGEFFNHVIWKATDFDVLSYKKTMLHLTDIQLQDNKTFLAMINHVLSVDGFYFSTTYDLTHTLQRLSNTSPEFQEMSLLERADQRFVWNGHLLRELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRGIDSEGHAANFVETEQIVHYNGSRASFVQTRGSIPLYWSQRPNLKYKPRPLINKVANHMDGFQRHFDSQVIIYGRQIIINLVNQKGSEKPLEQAFATMVSSLASGMIRYIAFDFHKECKNMRWDRLSILVDQVAEMQDELSYFLVDPAGKVLTNQEGVFRSNCMDCLDRTNVIQSLLARRSLQAQLQRLGVLHVGQKLEEQDEFEKIYKNAWADNANACAKQYAGTGALKTDFTRTGKRTQLGLIMDGWNSLIRYYKNNFSDGFRQDSIDLFLGNYSVDELDSHSPLSVPRDLKFLALPIIMVVAFSMCIICLLMAAKDCSVKDSCSTPTPH", "length": 558, "header": "tr|A0A8W4FLF2-1|A0A5G2Q9B0_PIG Computationally mapped isoform of Phosphatidylinositol-3-phosphatase SAC1 OS=Sus scrofa OX=9823 GN=SACM1L PE=1 SV=1 CANONICAL=A0A5G2Q9B0-1" }, "locus": { "chromosome": "13", "start_pos": 28887778, "end_pos": 28817244, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000106448.1", "url": "https://www.ensembl.org/id/ENSSSCT00000106448.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080037.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080037.1" } ] } }, { "isoform_ac": "A0A8W4FMX1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FMX1/entry", "sequence": { "sequence": "MIFLYESNWWFYSKLKPYQHTTPEKFYVEACDDGADDVLIIDRVSTEVTLSVKKDIPPSAVTRPIFGILGTIHLVAGNYLIVITKKKKIGEFFNHVIWKATDFDVLSYKKTMLHLTDIQLQDNKTFLAMINHVLSVDGFYFSTTYDLTHTLQRLSNTSPEFQEMSLLERADQRFVWNGHLLRELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRGIDSEGHAANFVETEQIVHYNGSRASFVQTRGSIPLYWSQRPNLKYKPRPLINKVANHMDGFQRHFDSQVIIYGRQIIINLVNQKGSEKPLEQAFATMVSSLASGMIRYIAFDFHKECKNMRWDRLSILVDQVAEMQDELSYFLVDPAGKVLTNQEGVFRSNCMDCLDRTNVIQSLLARRSLQAQLQRLGVLHVGQKLEEQDEFEKIYKNAWADNANACAKQYAGTGALKTDFTRTGKRTQLGLIMDGWNSLIRYYKNNFSDGFRQSFKCSKGFEIPGCKKPLCFSHSLEHFLSFFTMAKILSMLPDWSKKKR", "length": 547, "header": "tr|A0A8W4FMX1-1|A0A5G2Q9B0_PIG Computationally mapped isoform of Phosphatidylinositol-3-phosphatase SAC1 OS=Sus scrofa OX=9823 GN=SACM1L PE=1 SV=1 CANONICAL=A0A5G2Q9B0-1" }, "locus": { "chromosome": "13", "start_pos": 28889958, "end_pos": 28842590, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000097260.1", "url": "https://www.ensembl.org/id/ENSSSCT00000097260.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079660.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079660.1" } ] } }, { "isoform_ac": "I3LJB6-1", "url": "https://www.uniprot.org/uniprotkb/I3LJB6/entry", "sequence": { "sequence": "MAATTYERLKLHTTPEKFYVEACDDGADDVLIIDRVSTEVTLSVKKDIPPSAVTRPIFGILGTIHLVAGNYLIVITKKKKIGEFFNHVIWKATDFDVLSYKKTMLHLTDIQLQDNKTFLAMINHVLSVDGFYFSTTYDLTHTLQRLSNTSPEFQEMSLLERADQRFVWNGHLLRELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRGIDSEGHAANFVETEQIVHYNGSRASFVQTRGSIPLYWSQRPNLKYKPRPLINKVANHMDGFQRHFDSQVIIYGRQIIINLVNQKGSEKPLEQAFATMVSSLASGMIRYIAFDFHKECKNMRWDRLSILVDQVAEMQDELSYFLVDPAGKVLTNQEGVFRSNCMDCLDRTNVIQSLLARRSLQAQLQRLGVLHVGQKLEEQDEFEKIYKNAWADNANACAKQYAGTGALKTDFTRTGKRTQLGLIMDGWNSLIRYYKNNFSDGFRQDSIDLFLGNYSVDELDSHSPLSVPRDLKFLALPIIMVVAFSMCIICLLMAGDTWTETLAYVLFWGVASIGTFFIILYNGKDFVDAPRLVQKEKID", "length": 587, "header": "tr|I3LJB6-1|A0A5G2Q9B0_PIG Computationally mapped isoform of Phosphatidylinositol-3-phosphatase SAC1 OS=Sus scrofa OX=9823 GN=SACM1L PE=1 SV=2 CANONICAL=A0A5G2Q9B0-1" }, "locus": { "chromosome": "13", "start_pos": 28889963, "end_pos": 28817244, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029881.3", "url": "https://www.ensembl.org/id/ENSSSCT00000029881.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024175.2", "url": "https://www.ensembl.org/id/ENSSSCP00000024175.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDG0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDG0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100621788", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621788", "resource": "KEGG Pathway" }, { "id": "R-SSC-1483248", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1483248", "resource": "Reactome", "description": "Synthesis of PIPs at the ER membrane" }, { "id": "R-SSC-1660514", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1660514", "resource": "Reactome", "description": "Synthesis of PIPs at the Golgi membrane" } ], "orthologs": [ { "uniprot_canonical_ac": "A6QL88-1", "protein_name": "Phosphatidylinositol-3-phosphatase SAC1", "gene_name": "SACM1L", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAATTYERLKLHVTPEKFYVEACDDGADDVLIIDRVSTEVTLSVKKDIPPSAVTRPIFGILGTIHLVAGNYLIVITKKKKIGEFFNHVIWKATDFDVLSYKKTMLHLTDIQLQDNKTFLAMMNHVLSMDGFYFSTTYDLTHTLQRLSNTSPEFQEMSLLERADQRFVWNGHLLRELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRGIDSEGHAANFVETEQIVHYNGSRASFVQTRGSIPLYWSQRPNLKYKPLPLINKVANHMDGFQRHFDSQIIIYGKQVIINLVNQKGSEKPLEQAFATMVSSLGNGMIRYIAFDFHKECKNMRWDRLSILLDQVAEMQDELSYFLVDPAGVVLSTQEGVFRSNCMDCLDRTNVIQSLLARRSLQAQLQRLGVLHVGQKLEEQDEFEKIYKNAWADNANACAKQYAGTGALKTDFTRTGKRTQLGLIMDGWNSLIRYYKNNFSDGFRQDSIDLFLGNYSVDELESHSPLSVPRDLKFLALPIIMVVAFSMCIICLLMAGDTWTETLAYVLFWGVASIGTFFIILYNGKDFVDAPRLVQKEKID", "length": 587 }, "evidence": [ { "id": "A0A5G2Q9B0", "url": "https://omabrowser.org/oma/group/A0A5G2Q9B0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P32368-1", "protein_name": "Phosphatidylinositol-3-phosphatase SAC1", "gene_name": "SAC1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTGPIVYVQNADGIFFKLAEGKGTNDAVIHLANQDQGVRVLGAEEFPVQGEVVKIASLMGFIKLKLNRYAIIANTVEETGRFNGHVFYRVLQHSIVSTKFNSRIDSEEAEYIKLLELHLKNSTFYFSYTYDLTNSLQRNEKVGPAASWKTADERFFWNHYLTEDLRNFAHQDPRIDSFIQPVIYGYAKTVDAVLNATPIVLGLITRRSIFRAGTRYFRRGVDKDGNVGNFNETEQILLAENPESEKIHVFSFLQTRGSVPIYWAEINNLKYKPNLVLGENSLDATKKHFDQQKELYGDNYLVNLVNQKGHELPVKEGYESVVHALNDPKIHYVYFDFHHECRKMQWHRVKLLIDHLEKLGLSNEDFFHKVIDSNGNTVEIVNEQHSVVRTNCMDCLDRTNVVQSVLAQWVLQKEFESADVVATGSTWEDNAPLLTSYQNLWADNADAVSVAYSGTGALKTDFTRTGKRTRLGAFNDFLNSASRYYQNNWTDGPRQDSYDLFLGGFRPHTASIKSPFPDRRPVYIQLIPMIICAALTVLGATIFFPKDRFTSSKNLLYFAGASIVLALSTKFMFKNGIQFVNWPKLVDVGFLVVHQTHDKEQQFKGLKYAQSPKFSKPDPLKRD", "length": 623 }, "evidence": [ { "id": "A0A5G2Q9B0", "url": "https://omabrowser.org/oma/group/A0A5G2Q9B0/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q9C5G5-1", "protein_name": "Phosphoinositide phosphatase SAC7", "gene_name": "SAC7", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "METVDSRNKLHSRLRLWEFPDQYIIEPADGSGSSCLDISRVDASMKLIDQVPESNSVRVPKIRSIFGVVGMLKLLAGSYLVVVTESERVGSFLGHPIFKVTTLKVLPCDHSLKNSPEEQKKMETEFSKLLSVAEKTTGLYFSYEVNLTLSSQRLHEMGDESKSLPLWRQAEPRFLWNNYMLEVLIDNKLDQFLLPVIQGSFNSFETAIGRDIVDITLIARRCTRRNGTRMWRRGADLDGYVANFVETEQIVQMNGYTSSFVQVRGSMPFMWEQVVDLTYKPKFEIVQPEEAKRIAERHFLDLRKKYGSVLAVDLVNKQGGEGRLCEKYATVMQHITGDDIRYLHFDFHQICGHIHFERLSILYEQIEGFLEKNGYFLLNEKGEKMKEQLGVVRSNCIDCLDRTNVTQSMIGRKMLEVQLKRIGVFGAEETISSHLNFDEHYKILWANHGDEISIQYSGTPALKGDFVRYGHRTAHGVLKDGWSSLRRYYLNNFADGTKQDAIDLLQGHYIVAVSRDMAPVPQKGGLEAVANFPVALFVVLMSFWFATMSLKQTGSDYKHKHLFFSLLWTGICVGMAALVRANGRIFCNRPRLHKPRG", "length": 597 }, "evidence": [ { "id": "A0A5G2Q9B0", "url": "https://omabrowser.org/oma/group/A0A5G2Q9B0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9EP69-1", "protein_name": "Phosphatidylinositol-3-phosphatase SAC1", "gene_name": "Sacm1l", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAAYEHLKLHITPEKFYVEACDDGADDVLIIDRVSTEVTLAVKKDVPPSAVTRPIFGILGTIHLVAGNYLVVITKKMKVGECFNHAVWRATDFDVLSYKKTMLHLTDIQLQDNKTFLAMLNHVLSMDGFYFSTTYDLTHTLQRLSNTSPEFQEMSLLERADQRFVWNGHLLRELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRGIDSEGHAANFVETEQIVHYSGNRASFVQTRGSIPIFWSQRPNLKYKPHPQISKVANHMDGFQRHFDSQVIIYGKQVIINLVNHKGSEKPLEQTFANMVSSLGSGMIRYIAFDFHKECKNMRWDRLSILLDQVAEMQDELSYFLVDSAGKVVTNQDGVFRSNCMDCLDRTNVIQSLLARRSLQAQLQRLGVLHVGQKLEEQDEFEKTYKNAWADNANACAKQYAGTGALKTDFTRTGKRTQLGLLMDGFNSLLRYYKNNFSDGFRQDSIDLFLGNYSVDELESHSPLSVPRDWKFLALPIIMVVAFSMCIICLLMAGDTWTETLAYVLFWGVASIGTFFIILYNGKDFVDAPRLVQKEKID", "length": 587 }, "evidence": [ { "id": "A0A5G2Q9B0", "url": "https://omabrowser.org/oma/group/A0A5G2Q9B0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9ES21-1", "protein_name": "Phosphatidylinositol-3-phosphatase SAC1", "gene_name": "Sacm1l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAATAYEHLKLHITPEKFYVEACDDGADDVLIIDRVSTEVTLAVKKDVPPSAVTRPIYGIMGTIHLVAGNYLVVITKKMKVGEFFNHVIWKATDFDVLSYKKTMLHLTDIQLQDNKTFLAMLNHVLSTDGFYFSTTYDLTHTLQRLSNTSPEFQEMSLLERADQRFVWNGHLLRELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRGIDSEGHAANFVETEQIVHYSGNRASFVQTRGSIPVFWSQRPNLKYKPDPQINKVANHMDGFQRHFDSQVIIYGKQVIINLVNHKGSEKPLEQTFAKMVSSLGSGMIRYIAFDFHKECKNMRWDRLSILLDQVAEMQDELSYFLVDSAGKVVTNQEGVFRSNCMDCLDRTNVIQSLLARRSLQAQLQRLGVLHVGQKLEEQDEFEKIYKNAWADNANACAKQYAGTGALKTDFTRTGKRTQLGLVMDGFNSLLRYYKNNFSDGFRQDSIDLFLGNYSVDELDSHSPLSVPRDWKFLALPIIMVVAFSMCIICLLMAGDTWTETLAYVLFWGVASIGTFFIILYNGKDFVDAPRLVQKEKID", "length": 587 }, "evidence": [ { "id": "A0A5G2Q9B0", "url": "https://omabrowser.org/oma/group/A0A5G2Q9B0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9NTJ5-1", "protein_name": "Phosphatidylinositol-3-phosphatase SAC1", "gene_name": "SACM1L", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATAAYEQLKLHITPEKFYVEACDDGADDVLTIDRVSTEVTLAVKKDVPPSAVTRPIFGILGTIHLVAGNYLIVITKKIKVGEFFSHVVWKATDFDVLSYKKTMLHLTDIQLQDNKTFLAMLNHVLNVDGFYFSTTYDLTHTLQRLSNTSPEFQEMSLLERADQRFVWNGHLLRELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRGIDSEGHAANFVETEQIVHYNGSKASFVQTRGSIPVFWSQRPNLKYKPLPQISKVANHMDGFQRHFDSQVIIYGKQVIINLINQKGSEKPLEQTFATMVSSLGSGMMRYIAFDFHKECKNMRWDRLSILLDQVAEMQDELSYFLVDSAGQVVANQEGVFRSNCMDCLDRTNVIQSLLARRSLQAQLQRLGVLHVGQKLEEQDEFEKIYKNAWADNANACAKQYAGTGALKTDFTRTGKRTHLGLIMDGWNSMIRYYKNNFSDGFRQDSIDLFLGNYSVDELESHSPLSVPRDWKFLALPIIMVVAFSMCIICLLMAGDTWTETLAYVLFWGVASIGTFFIILYNGKDFVDAPRLVQKEKID", "length": 587 }, "evidence": [ { "id": "A0A5G2Q9B0", "url": "https://omabrowser.org/oma/group/A0A5G2Q9B0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9W0I6-1", "protein_name": "Phosphatidylinositol-3-phosphatase SAC1", "gene_name": "Sac1", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MDSREENAVYDDMNLYIAPQSFIIEPNGGDELLVIGRHDKVTRVQPASGGLVANLRPTRRICGVLGTIHLLSCDYLLVATHRLFVGVLNGAVVWRLAGYDIIPYIPNSFQRKENENYLRLLRQTLDTKFFYFSYRYDLTNSLQRQREVAQSRPEVSGLLQRAEQRFVWNGYVLRQFNCDKMEKFQLPLVLGFVSINQVQINGQTFFWSIITRRSVQRAGTRLFCRGSDEQGHVANFVETEQIVEFNGQLTGFVQTRGSMPFHWHQLPNLRYKPRPVLVPGKDHLAACGLHFKEQIRLYGNNVAVNLVDHKGAEGELEATYARLVREMGNPQVRYESFDFHSECRKMRWDRLNILIDRLAHEQDQFGVYHVFDDGKLVSTQTGVFRTNCIDCLDRTNVVQSMLARRSLTAVLQKLGVLHVGQKVEHASDIFESIFKGVWADNADLVSLQYSGTCALKTDFTRTGKRTKSGAMQDGKNSLMRYYLNNFADGQRQDSIDLFLGKYLVNDNEGGAVPSPLESKHGWRFFTFPSVLLVAVAMFMITMTYPAEFNTENLLFMLFWGAMIAVSATGILHYGVEFVQWPRLFPPISFRDP", "length": 592 }, "evidence": [ { "id": "A0A5G2Q9B0", "url": "https://omabrowser.org/oma/group/A0A5G2Q9B0/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "phosphatidylinositol-3-phosphate phosphatase activity", "id": "GO:0004438", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004438", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9B0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9B0" } ], "pmid": "" }, { "name": "phosphatidylinositol-4-phosphate phosphatase activity", "id": "GO:0043812", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043812", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9B0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9B0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "glutamatergic synapse", "id": "GO:0098978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098978", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9B0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9B0" } ], "pmid": "" }, { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9B0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9B0" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9B0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9B0" } ], "pmid": "" }, { "name": "AMPA glutamate receptor complex", "id": "GO:0032281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032281", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9B0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9B0" } ], "pmid": "" }, { "name": "endoplasmic reticulum-plasma membrane contact site", "id": "GO:0140268", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140268", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9B0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9B0" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9B0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9B0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "phosphatidylinositol dephosphorylation", "id": "GO:0046856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046856", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9B0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9B0" } ], "pmid": "" }, { "name": "exocytic insertion of neurotransmitter receptor to postsynaptic membrane", "id": "GO:0098967", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098967", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9B0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9B0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 12, "end_pos": 14, "annotation": "n_glycosylation_sequon" }, { "start_pos": 144, "end_pos": 146, "annotation": "n_glycosylation_sequon" }, { "start_pos": 382, "end_pos": 384, "annotation": "n_glycosylation_sequon" }, { "start_pos": 398, "end_pos": 400, "annotation": "n_glycosylation_sequon" }, { "start_pos": 45, "end_pos": 47, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "12316", "name": "", "equation": "a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol-3-phosphate) + H2O = a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol) + phosphate", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "12316", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/12316" } ] }, { "id": "55652", "name": "", "equation": "a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol 4-phosphate) + H2O = a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol) + phosphate", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "55652", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/55652" } ] }, { "id": "R-SSC-1676114", "name": "PI3P is dephosphorylated to PI by SACM1L at the Golgi membrane", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "Golgi membrane, cytosol", "input_participant_list": [ "R-ALL-1806159" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1676114", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1676114" } ] }, { "id": "R-SSC-1676124", "name": "PI4P is dephosphorylated to PI by SACM1L at the ER membrane", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, endoplasmic reticulum membrane", "input_participant_list": [ "R-ALL-1806234" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1676124", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1676124" } ] }, { "id": "R-SSC-1676133", "name": "PI4P is dephosphorylated to PI by SACM1L at the Golgi membrane", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. 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"categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBU9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBU9" } ], "pmid": "" }, { "name": "prefoldin complex", "id": "GO:0016272", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016272", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBU9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBU9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "unfolded protein binding", "id": "GO:0051082", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051082", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBU9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBU9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "protein folding", "id": "GO:0006457", "url": 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"isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 24, "end_pos": 26 }, { "start_pos": 9, "end_pos": 11 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QCB3-1", "uniprot_ac": "A0A5G2QCB3", "uniprot_id": "A0A5G2QCB3_PIG", "mass": { "chemical_mass": 63009.0, "monoisotopic_mass": 63009.0 }, "refseq": {}, "gene_names": [ { "name": "FARSB", "type": "recommended", "evidence": [ { "id": "A0A5G2QCB3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCB3" } ] } ], "protein_names": [ { "name": "Phenylalanine--tRNA ligase beta subunit", "type": "recommended", "evidence": [ { "id": "A0A5G2QCB3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCB3/entry#names_and_taxonomy" } ] }, { "name": "6.1.1.20", "type": "synonym", "evidence": [ { "id": "A0A5G2QCB3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCB3/entry#names_and_taxonomy" } ] }, { "name": "Phenylalanyl-tRNA synthetase beta subunit", "type": "synonym", "evidence": [ { "id": "A0A5G2QCB3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCB3/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCB3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCB3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "FARSB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCB3", "locus": {} } ], "crossref": [ { "id": "A0A5G2QCB3", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QCB3", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000016226", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016226", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00769", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00769", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100524650", "url": "https://www.ncbi.nlm.nih.gov/gene/100524650", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004531", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004531", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005146", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005146", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005147", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005147", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009061", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009061", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020825", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020825", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040659", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040659", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041616", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041616", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045060", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045060", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045864", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045864", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100524650", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524650", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FPGRCAN", "url": "https://omabrowser.org/oma/group/FPGRCAN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LUM8", "url": "https://www.orthodb.org/?gene=I3LUM8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10947", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10947", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10947:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10947:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03483", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03483", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03484", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03484", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF17759", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17759", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18262", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18262", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "19413", "url": "https://www.rhea-db.org/rhea/19413", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QCB3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCB3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QCB3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCB3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QMT5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMT5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QMT5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMT5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QXM5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QXM5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QXM5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QXM5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RG03", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RG03", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RG03-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RG03-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FKK9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FKK9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FKK9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FKK9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SR70", "url": "https://www.uniprot.org/uniprotkb/F1SR70", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SR70-1", "url": "https://www.uniprot.org/uniprotkb/F1SR70-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LUM8", "url": "https://www.uniprot.org/uniprotkb/I3LUM8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LUM8-1", "url": "https://www.uniprot.org/uniprotkb/I3LUM8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPTVSVKRDVLFRALGRTYTNEEFDELCFEFGLELDEITSEKEIISKEQGNEKAQGASDVVLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPMYKRVMPNGEIQKLIITEETAKIRPYAVAAVLRNMKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKKPADIKFKPLNKSKEYTACELMNIYKTDNQLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGNHSKITVNTRNVFIECTGTDFTKAKIVLDTIVTMFSEYCDNQFTVEAAEVVFPNGKLHTFPELAYRKEIVRADLINKKIGIRETPENLAKLLTRMCLKSEVIGDGHQIEIEVPPTRADIIHACDIIEDAAIAYGYNNIQMTLPKTYTIANQFPLNKFTELLRHDMAAAGFTEALTFALVARTTLLPGLLKTIAANRKMPLPLKLFEISDVVIKDSSRDVGARNYRHLCAVYYNKNPGFEIIHGLLDRIMQLFAVPPGEKKGGYVIKASEGPAFFPGRCAEIFARGQSIGKLGVLHPDVITKFELTLPCSCLEINIEPFL", "length": 558, "header": "tr|A0A5G2QCB3-1|A0A5G2QCB3_PIG Isoform 1 of Phenylalanine--tRNA ligase beta subunit OS=Sus scrofa OX=9823 GN=FARSB PE=1 SV=1 CANONICAL=A0A5G2QCB3-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QCB3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCB3/entry", "sequence": { "sequence": "MPTVSVKRDVLFRALGRTYTNEEFDELCFEFGLELDEITSEKEIISKEQGNEKAQGASDVVLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPMYKRVMPNGEIQKLIITEETAKIRPYAVAAVLRNMKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKKPADIKFKPLNKSKEYTACELMNIYKTDNQLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGNHSKITVNTRNVFIECTGTDFTKAKIVLDTIVTMFSEYCDNQFTVEAAEVVFPNGKLHTFPELAYRKEIVRADLINKKIGIRETPENLAKLLTRMCLKSEVIGDGHQIEIEVPPTRADIIHACDIIEDAAIAYGYNNIQMTLPKTYTIANQFPLNKFTELLRHDMAAAGFTEALTFALVARTTLLPGLLKTIAANRKMPLPLKLFEISDVVIKDSSRDVGARNYRHLCAVYYNKNPGFEIIHGLLDRIMQLFAVPPGEKKGGYVIKASEGPAFFPGRCAEIFARGQSIGKLGVLHPDVITKFELTLPCSCLEINIEPFL", "length": 558, "header": "tr|A0A5G2QCB3-1|A0A5G2QCB3_PIG Isoform 1 of Phenylalanine--tRNA ligase beta subunit OS=Sus scrofa OX=9823 GN=FARSB PE=1 SV=1 CANONICAL=A0A5G2QCB3-1" }, "locus": { "chromosome": "15", "start_pos": 124554957, "end_pos": 124472372, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067165.1", "url": "https://www.ensembl.org/id/ENSSSCT00000067165.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061179.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061179.1" } ] } }, { "isoform_ac": "A0A5G2QMT5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMT5/entry", "sequence": { "sequence": "MPTVSVKRDVLFRALGRTYTNEEFDELCFEFGLELDEITSEKEIISKEQGNEKAQGASDVVLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPMYKRVMPNGEIQKLIITEETAKIRPYAVAAVLRNMKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKKPADIKFKPLNKSKEYTACELMNIYKTDNQLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGNHSKITVNTRNVFIECTGTDFTKAKIVLDTIVTMFSEYCDNQFTVEAAEVVFPNGKLHTFPELAYRKEIVRADLINKKIGIRETPENLAKLLTRMCLKSEVIGDGHQIEIEVPPTRADIIHACDIIEDAAIAYGYNNIQMTLPKTYTIANQFPLNKFTELLRHDMAAAGFTEALTFALCSQEDIADKLGLDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDVVIKDSSRDVGARNYRHLCAVYYNKNPGFEIIHGLLDRIMQLFAVPPGEKKGGYVIKASEVPFSPLVTILKFFWVCEPVHFYHIFDSTCPAFFPGRCAEIFARGQSIGKLGVLHPDVITKFELTLPCSCLEINIEPFL", "length": 617, "header": "tr|A0A5G2QMT5-1|A0A5G2QMT5_PIG Computationally mapped isoform of Phenylalanine--tRNA ligase beta subunit OS=Sus scrofa OX=9823 GN=FARSB PE=1 SV=1 CANONICAL=A0A5G2QCB3-1" }, "locus": { "chromosome": "15", "start_pos": 124554957, "end_pos": 124472372, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067712.2", "url": "https://www.ensembl.org/id/ENSSSCT00000067712.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065358.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065358.1" } ] } }, { "isoform_ac": "A0A5G2QXM5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QXM5/entry", "sequence": { "sequence": "MPTVSVKRDVLFRALGRTYTNEEFDELCFEFGLELDEITSEKEIISKEQGNEKAQGASDVVLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPMYKRVMPNGEIQKLIITEETAKIRPYAVAAVLRNMKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKKPADIKFKPLNKSKEYTACELMNIYKTDNQLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGNHSKITVNTRNVFIECTGTDFTKAKIVLDTIVTMFSEYCDNQFTVEAAEVVFPNGKLHTFPELAYRKEIVRADLINKKIGIRETPENLAKLLTRMCLKSEVIGDGHQIEIEVPPTRADIIHACDIIEDAAIAYGYNNIQMTLPKTYTIANQFPLNKFTELLRHDMAAAGFTEALTFALCSQEDIADKLGLDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDVVIKDSSRDVGARNYRHLCAVYYNKNPGFEIIHGLLDRIMQLFAVPPGEKKGGYVIKASEAEYGASMNSFGTGPAFFPGRCAEIFARGQSIGKLGVLHPDVITKFELTLPCSCLEINIEPFL", "length": 601, "header": "tr|A0A5G2QXM5-1|A0A5G2QCB3_PIG Computationally mapped isoform of Phenylalanine--tRNA ligase beta subunit OS=Sus scrofa OX=9823 GN=FARSB PE=1 SV=1 CANONICAL=A0A5G2QCB3-1" }, "locus": { "chromosome": "15", "start_pos": 124554957, "end_pos": 124472372, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082856.1", "url": "https://www.ensembl.org/id/ENSSSCT00000082856.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069675.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069675.1" } ] } }, { "isoform_ac": "A0A5G2RG03-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RG03/entry", "sequence": { "sequence": "MPTVSVKRDVLFRALGRTYSECQPHKLRFCALCGRLGFPSKKTSEKEIISKEQGNEKAQGASDVVLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPMYKRVMPNGEIQKLIITEETAKIRPYAVAAVLRNMKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKKPADIKFKPLNKSKEYTACELMNIYKTDNQLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGNHSKITVNTRNVFIECTGTDFTKAKIVLDTIVTMFSEYCDNQFTVEAAEVVFPNGKLHTFPELAYRKEIVRADLINKKIGIRETPENLAKLLTRMCLKSEVIGDGHQIEIEVPPTRADIIHACDIIEDAAIAYGYNNIQMTLPKTYTIANQFPLNKFTELLRHDMAAAGFTEALTFALCSQEDIADKLGLDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDVVIKDSSRDVGARNYRHLCAVYYNKNPGFEIIHGLLDRIMQLFAVPPGEKKGGYVIKASEAEYGASMNSFGTGPAFFPGRCAEIFARGQSIGKLGVLHPDVITKFELTLPCSCLEINIEPFL", "length": 605, "header": "tr|A0A5G2RG03-1|A0A5G2QCB3_PIG Computationally mapped isoform of Phenylalanine--tRNA ligase beta subunit OS=Sus scrofa OX=9823 GN=FARSB PE=1 SV=2 CANONICAL=A0A5G2QCB3-1" }, "locus": { "chromosome": "15", "start_pos": 124554957, "end_pos": 124472372, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071831.2", "url": "https://www.ensembl.org/id/ENSSSCT00000071831.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073837.2", "url": "https://www.ensembl.org/id/ENSSSCP00000073837.2" } ] } }, { "isoform_ac": "A0A8W4FKK9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FKK9/entry", "sequence": { "sequence": "MPTVSVKRDVLFRALGRTYSECQPHKLRFCALCGRLGFPSKKTSEKEIISKEQGNEKAQGASDVVLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPMYKRVMPNGEIQKLIITEETAKIRPYAVAAVLRNMKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKKPADIKFKPLNKSKEYTACELMNIYKTDNQLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGNHSKITVNTRNVFIECTGTDFTKAKIVLDTIVTMFSEYCDNQFTVEAAEVVFPNGKLHTFPELAYRKEIVRADLINKKIGIRETPENLAKLLTRMCLKSEVIGDGHQIEIEVPPTRADIIHACDIIEDAAIAYGYNNIQMTLPKTYTIANQVRLLTRYLSGSCLVARTTLLPGLLKTIAANRKMPLPLKLFEISDVVIKDSSRDVGARNYRHLCAVYYNKNPGFEIIHGLLDRIMQLFAVPPGEKKGGYVIKASEGPAFFPGRCAEIFARGQSIGKLGVLHPDVITKFELTLPCSCLEINIEPFL", "length": 548, "header": "tr|A0A8W4FKK9-1|A0A5G2QCB3_PIG Computationally mapped isoform of Phenylalanine--tRNA ligase beta subunit OS=Sus scrofa OX=9823 GN=FARSB PE=1 SV=1 CANONICAL=A0A5G2QCB3-1" }, "locus": { "chromosome": "15", "start_pos": 124554957, "end_pos": 124472372, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093351.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093351.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079864.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079864.1" } ] } }, { "isoform_ac": "F1SR70-1", "url": "https://www.uniprot.org/uniprotkb/F1SR70/entry", "sequence": { "sequence": "MPTVSVKRDVLFRALGRTYTNEEFDELCFEFGLELDEITSEKEIISKEQGNEKAQGASDVVLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPMYKRVMPNGEIQKLIITEETAKIRPYAVAAVLRNMKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKKPADIKFKPLNKSKEYTACELMNIYKTDNQLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGNHSKITVNTRNVFIECTGTDFTKAKIVLDTIVTMFSEYCDNQFTVEAAEVVFPNGKLHTFPELAYRKEIVRADLINKKIGIRETPENLAKLLTRMCLKSEVIGDGHQIEIEVPPTRADIIHACDIIEDAAIAYGYNNIQMTLPKTYTIANQFPLNKFTELLRHDMAAAGFTEALTFALCSQEDIADKLGLDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDVVIKDSSRGPAFFPGRCAEIFARGQSIGKLGVLHPDVITKFELTLPCSCLEINIEPFL", "length": 537, "header": "tr|F1SR70-1|F1SR70_PIG Computationally mapped isoform of Phenylalanine--tRNA ligase beta subunit OS=Sus scrofa OX=9823 GN=FARSB PE=1 SV=3 CANONICAL=A0A5G2QCB3-1" }, "locus": { "chromosome": "15", "start_pos": 124554957, "end_pos": 124472372, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017668.4", "url": "https://www.ensembl.org/id/ENSSSCT00000017668.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017189.3", "url": "https://www.ensembl.org/id/ENSSSCP00000017189.3" } ] } }, { "isoform_ac": "I3LUM8-1", "url": "https://www.uniprot.org/uniprotkb/I3LUM8/entry", "sequence": { "sequence": "MPTVSVKRDVLFRALGRTYTNEEFDELCFEFGLELDEITSEKEIISKEQGNEKAQGASDVVLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPMYKRVMPNGEIQKLIITEETAKIRPYAVAAVLRNMKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKKPADIKFKPLNKSKEYTACELMNIYKTDNQLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGNHSKITVNTRNVFIECTGTDFTKAKIVLDTIVTMFSEYCDNQFTVEAAEVVFPNGKLHTFPELAYRKEIVRADLINKKIGIRETPENLAKLLTRMCLKSEVIGDGHQIEIEVPPTRADIIHACDIIEDAAIAYGYNNIQMTLPKTYTIANQFPLNKFTELLRHDMAAAGFTEALTFALCSQEDIADKLGLDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDVVIKDSSRDVGARNYRHLCAVYYNKNPGFEIIHGLLDRIMQLFAVPPGEKKGGYVIKASEGPAFFPGRCAEIFARGQSIGKLGVLHPDVITKFELTLPCSCLEINIEPFL", "length": 589, "header": "tr|I3LUM8-1|A0A5G2QCB3_PIG Computationally mapped isoform of Phenylalanine--tRNA ligase beta subunit OS=Sus scrofa OX=9823 GN=FARSB PE=1 SV=2 CANONICAL=A0A5G2QCB3-1" }, "locus": { "chromosome": "15", "start_pos": 124554957, "end_pos": 124472372, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023908.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023908.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000027828.2", "url": "https://www.ensembl.org/id/ENSSSCP00000027828.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FKK9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FKK9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100524650", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524650", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7F7M2-1", "protein_name": "Phenylalanine--tRNA ligase beta subunit", "gene_name": "Farsb", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKQIISKEQGNVKAEGASDVVLYKVDVPANRYDLLCLEGLARGLQVFKERIKAPVYKRVMPKGEIQKLIITEETAKVRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTFTAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGNHSKITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVSPNGKSSTFPELAYRKEMVRADLINKKVGIRESPANLAKLLTRMCLKSEVIGDGNQIEVEIPPTRADVIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRLDMAAAGFTEALTFALCSQEDIADKLGLDISETKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDIVVKDSSKDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPSEEKGGYVIKASTGPPIWFPGDSCRRPEALAAPLFTWLMASWAHYKALVSSGLTLHHAATLPRP", "length": 590 }, "evidence": [ { "id": "A0A5G2QCB3", "url": "https://omabrowser.org/oma/group/A0A5G2QCB3/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P15624-1", "protein_name": "Phenylalanine--tRNA ligase beta subunit", "gene_name": "FRS1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MPTVSVNKQQLFDLLGKNYTSQEFDELCFEFGMEMDEDTTEEALKTGEEPELKLDISANRYDLLCIEGISQSLNEYLERKERPDYKLSKPTTKLIIDKSTEQIRPFATAAVLRNIKLNEKSYASFIALQDKLHANLCRNRSLVAMGTHDLDSIEGPFHYRALPPKDIKFVPLNQTQEFTGDKLIEFYKSPEQKNNIGRYVHIIEDSPVFPVIMDSKDRVCSLPPLINSEHSKISVNTRNILIDITATDKTKAEIVLNILTTMFSRYCDEPFTVEPVEIVSEHNGQSRLAPNFNDRIMDVSIKYINSCLGLDQSADEIAHCLKKMSLHAVQSKEDKDILHVDIPVTRPDILHACDIMEDAAVGYGFNNLPKGEKLSNANFIAKPLPINKVSDIFRVASSQATWVEVLPLTLCSHDENFKFLRQSDNGDLAVKLANPKTLEYQVVRTTLLPGILKTVKENRKHSLPIKVFETGDVVFKDDKLERKAYNERHWAAIYVGKNSGFEIIQGLLGKIMQTFRTEWIADYGAAASGRGYWIEEDDSVKTYFPGRGAKVMFRSKEGAEPKQIGHLGVLHPEVMMNFDVPFAASFVEVNAEVFL", "length": 595 }, "evidence": [ { "id": "A0A5G2QCB3", "url": "https://omabrowser.org/oma/group/A0A5G2QCB3/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q550D2-1", "protein_name": "Phenylalanine--tRNA ligase beta subunit", "gene_name": "phesB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPKVNINRDILYKALGFYIKTYTQEQFEDLCFAFGVELDEVTSEREMKKNETGVEDLTVSDDVIYKIDVSANRYDLLCLEGIARALNVYNHKASIPKYQIVPPKNSHEKLYISKEVESVRPVIVAGILRDITFTQESYDSFIDLQEKLHANICKKRSLVSIGTHDLDTLSGPFYYKALAPKDIKFVPLSQTKEYNAEELFKFYDESSSHLKKFLPIIKDSPVYPVIYDSKNVVCSLPPIINGEHSKIKLSTKNVFIEVTANDRTKANIVLNTMLTMFSEYCKQPFTMEQVEVIDADGKSTGLYPQIQEKQINAQVDYINKSAGINITPNDMVTLLKRMSLQSKLSDDEKSIIVDVPVTRSDIMHACDIMEDVAIGYGYDNLKKEIPNCNTIGRVQPINKLSELLANEIALAGFTEIMTFVLCQNRDNFTALNKADDGSSVKISNAVSEEFTEVRTNLVSTLLKSVSANKAAPLPLKMFEISDVSIKGSLGNKDLSDPNSNNSDVGAYNKRMLGAIYCNQSAKIEVIHGLLDRIMLVLDIKLDATRSSNKGYYLELSNDKLFLPGTGINVIVNGKRVGHMGIVHPLVLKNYSCSFPCTILELELTIDTMAHNVLLREN", "length": 617 }, "evidence": [ { "id": "A0A5G2QCB3", "url": "https://omabrowser.org/oma/group/A0A5G2QCB3/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9NSD9-1", "protein_name": "Phenylalanine--tRNA ligase beta subunit", "gene_name": "FARSB", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAAGASDVVLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPVYKRVMPDGKIQKLIITEETAKIRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGDHSRITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDIVIKDSNTDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPGEDKGGYVIKASEGPAFFPGRCAEIFARGQSVGKLGVLHPDVITKFELTMPCSSLEINVGPFL", "length": 589 }, "evidence": [ { "id": "A0A5G2QCB3", "url": "https://omabrowser.org/oma/group/A0A5G2QCB3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9SGE9-1", "protein_name": "Phenylalanine--tRNA ligase beta subunit, cytoplasmic", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MPTISVGRDRLFAALGESYTQEKFEELCFSFGIELDDVTTEKAIIRKEKHIDEEADDDEEIIYKIEIPANRPDLLCLEGLAQSLRVFIEKQEIPTYTLADISKDKILQMNVKPETSKIRPFVVCAVLRGVTFDEARYNSFIDLQDKLHQNICRRRSLVAIGTHDLDTLQGPFTYEALPPTDINFVPLKQTKSFRADELIEFYKSDMKLKKFLHIIENSPVFPVLYDSKRTVLSLPPIINGAHSAITLQTKNVFIECTATDLTKAKIVLNTMVTTFSEFCARKFEIEPVEVTYDDGKSYIYPDLAVYDMEVPLSFITDSIGVSLKVEQVTSLLTRMQLQAEQAKSSDNQCAIKVHVPPSRSDVLHPCDVMEDVAIAYGFNNIPTRKPASIKPLTLNELTDLLRIEIAMCVYTEVVTWLLCSHKENFAMLNREDVNSAVIVGNPRSADFEAMRRALMPGLLKTVGHNNKYPKPIKIFEISDVVMLDESKDVGASNRRHLAALYCGATSGFELIHGLVDRIMEVMAIPFLTIHENNVPINEKDGYYVKLSQEPEFLPGRQASIIVRGKHIGNFGIVHPEVLNNFDIPDPCSYLELDIEAIL", "length": 598 }, "evidence": [ { "id": "A0A5G2QCB3", "url": "https://omabrowser.org/oma/group/A0A5G2QCB3/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VCA5-1", "protein_name": "Phenylalanine--tRNA ligase beta subunit", "gene_name": "beta-PheRS", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MPTIGVKRDLLFEALGKTYTDDEFQDLCFAFGLELDEVTTEKQMLTKEQGDVAAAANASEEIIYRIDIPANRYDLLCLEGLVTGLLVFQGKLKPPKFQFVELAKRQVLKIDPSTAQIRPYAVAAVLRNVTFTQASYNSFIDLQDKLHQNICRKRTLVAIGTHDLDTLQGPFSYEALAPDQIKFKPLNQTKEMTGSELMDFYSTHAQLKQYLPIIRESPVYPVIYDANRVVLSLPPIINGDHSKITLKTKNVFIECTATDRTKAKVVLDTIVCLFSEHCAQKFTVEPCDVVQPDGSVISYPELEVREERISVKRANAYIGIDEPAEKLADMLTRMYLEAKVDGDSLVVKIPPTRHDVIHACDIYEDVAIAYGYNNIKKSLPAFMQIAKQFPLNKLTEQLREQVAQAGFTEALTFTLCSRDDIGRKLNKNIDALPAVHIGNPKTLEFQVVRTTLLPGLLKTLVANRKMPLPLKLFEISDVVVADESTEVGARNERRVCAVNCNKTAGFEVVHGLLDRVMQLLSVPWKSASGTKGYYLQATEDPSYFPGRCANVMYDGVVIGKIGVLHPTVLQAFELTTPCSAVEFTIEPFV", "length": 589 }, "evidence": [ { "id": "A0A5G2QCB3", "url": "https://omabrowser.org/oma/group/A0A5G2QCB3/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9WUA2-1", "protein_name": "Phenylalanine--tRNA ligase beta subunit", "gene_name": "Farsb", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKQIISKEQGHGKAQGASDVVLYKIDVPANRYDLLCLEGLARGLQVFKERIKAPVYKRVMPKGDIQKLVITEETAKVRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIESKPLYPVIYDSNGVVLSMPPIINGNHSKITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEHCENQFTVEAVEVVSPNGKSSTFPELPYRKEMVRADLINKKVGIRETPANLAKLLTRMCLKSEVIGDGNQIEVEIPPTRADVIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRLDMAAAGFTEALTFALCSQEDIADKLGLDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDVVVKDSGKDVGAKNYRHLCAVYYNKTPGFEIIHGLLDRIMQLLDVPPGEESGGYMIKASAGSAFFPGRCAEIFVGGQSIGKLGVLHPDVITKFELTMPCSSLEINIEPFL", "length": 589 }, "evidence": [ { "id": "A0A5G2QCB3", "url": "https://omabrowser.org/oma/group/A0A5G2QCB3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "magnesium ion binding", "id": "GO:0000287", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000287", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCB3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCB3" } ], "pmid": "" }, { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCB3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCB3" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCB3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCB3" } ], "pmid": "" }, { "name": "phenylalanine-tRNA ligase activity", "id": "GO:0004826", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004826", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCB3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCB3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCB3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCB3" } ], "pmid": "" }, { "name": "phenylalanine-tRNA ligase complex", "id": "GO:0009328", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009328", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCB3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCB3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "phenylalanyl-tRNA aminoacylation", "id": "GO:0006432", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006432", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCB3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCB3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 187, "end_pos": 189, "annotation": "n_glycosylation_sequon" }, { "start_pos": 240, "end_pos": 242, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], 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"MMMMMMMKKMQHQRQQQADHANEANYARGTRLPLSGEGPTSQSNNSKQTVLSWQAAIDAARQAKAAQTMSTSAPPPVGSLSQRKRQQYAKSKKQGNSSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLEKVEYAFLIIFTVETFLKIIAYGLLLHPNAYVRNGWNLLDFVIVIVGLFSVILEQLTKETEGGNHSSGKSGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHKTCFFADSDIVAEEDPAPCAFSGNGRQCTANGTECRSGWVGPNGGITNFDNFAFAMLTVFQCITMEGWTDVLYWMNDAMGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEGGEESKRNTSMPTSETESVNTENVSGEGENQGCCGSLCQAISKSKLSRRWRRWNRFNRRRCRAAVKSVTFYWLVIVLVFLNTLTISSEHYNQPDWLTQIQDIANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGITETILVELEIMSPLGISVFRCVRLLRIFKVTRHWTSLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQKEEAEEKERKKIARKESLENKKNNKPEVNQIANSDNKVTIDDYREEDEDKDPYPPCDVPVGEEEEEEEEDEPEVPAGPRPRRISELNMKEKIAPIPEGSAFFILSKTNPIRVGCHKLINHHIFTNLILVFIMLSSAALAAEDPIRSHSFRNTILGYFDYAFTAIFTVEILLKMTTFGAFLHKGAFCRNYFNLLDMLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQNSDFNFDNVLSAMMALFTVSTFEGWPALLYKAIDSNGENVGPIYNYRVEISIFFIIYIIIVAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYEQSKMFNDAMDILNMVFTGVFTVEMVLKVIAFKPKGYFSDAWNTFDSLIVIGSIVDVALSEADPTESESVPVPTATPGNSEESNRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQMFGKVAMRDNNQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPGKLCDPESDYNPGEEYTCGSNFAIVYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKKTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEQGLVGKYPAKNSTIALQAGLRTLHDIGPEIRRAISCDLQDDEPEETKREEEEDVFKRNGALLGNHVNHVNSDRRESLQQTNTTHRPLHVQRPSIPPASDTEKPLFPPAGNSVCHNHHNHNSIGKQVPSSTNANLNNANMSKVVPGKRPSIGNLEHVSENGHHSSHKHGREPHRRSSIKRARYYETYIRSDSGDEQFPTICREDPEIHSYFRDPRCLGEREYFSGEECYEDDSSPTGSRQSYGCGYYNRYPGSSLDFERPRGYHHPQSFSEDDDSPVCYDSRRSPRRRLLPPTPTSHRRSSFNFECLRRQSSQEEVPPSPAFPHRTALPLHLMQQQIMAVAGLDSSKAQKYSPSHSTRSWATPPATPSYRDWTPCYTPLIQVERSEALDQVNGSLPSLHRSSWYTDEPGISYRTFTPASLTVPGSFHSKNSDKQRSADSLVEAVLISEGLGRYARDPKFVSATKHEIADACDLTIDEMESAASNLLNGNMHPRANGDVGPIAHRQDYELQDFGPGYSDEEPDPGRDEEDLADEMICITTL", "length": 2163, "header": "tr|A0A5G2QBW7-1|A0A5G2QBW7_PIG Isoform 1 of Voltage-dependent L-type calcium channel subunit alpha OS=Sus scrofa OX=9823 GN=CACNA1D PE=3 SV=1 CANONICAL=A0A5G2QBW7-1" }, "isoforms": [ { "isoform_ac": "A0A480Y640-1", "url": "https://www.uniprot.org/uniprotkb/A0A480Y640/entry", "sequence": { "sequence": "MMMMMMMKKMQHQRQQQADHANEANYARGTRLPLSGEGPTSQSNNSKQTVLSWQAAIDAARQAKAAQTMSTSAPPPVGSLSQRKRQQYAKSKKQGNSSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLEKVEYAFLIIFTVETFLKIIAYGLLLHPNAYVRNGWNLLDFVIVIVGLFSVILEQLTKETEGGNHSSGKSGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHKTCFFADSDIVAEEDPAPCAFSGNGRQCTANGTECRSGWVGPNGGITNFDNFAFAMLTVFQCITMEGWTDVLYWMNDAMGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEGGEESKRNTSMPTSETESVNTENVSGEGENQGCCGSLCQAISKSKLSRRWRRWNRFNRRRCRAAVKSVTFYWLVIVLVFLNTLTISSEHYNQPDWLTQIQDIANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGITETILVELEIMSPLGISVFRCVRLLRIFKVTRHWTSLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQKEEAEEKERKKIARKESLENKKNNKPEVNQIANSDNKVTIDDYREEDEDKDPYPPCDVPVGEEEEEEEEDEPEVPAGPRPRRISELNMKEKIAPIPEGSAFFILSKTNPIRVGCHKLINHHIFTNLILVFIMLSSAALAAEDPIRSHSFRNTILGYFDYAFTAIFTVEILLKMTTFGAFLHKGAFCRNYFNLLDMLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQNSDFNFDNVLSAMMALFTVSTFEGWPALLYKAIDSNGENVGPIYNYRVEISIFFIIYIIIVAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYEQSKMFNDAMDILNMVFTGVFTVEMVLKVIAFKPKGYFSDAWNTFDSLIVIGSIVDVALSEADNSEESNRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQMFGKVAMRDNNQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPGKLCDPESDYNPGEEYTCGSNFAIVYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKKTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEQGLVGKYPAKNSTIALQAGLRTLHDIGPEIRRAISCDLQDDEPEETKREEEEDVFKRNGALLGNHVNHVNSDRRESLQQTNTTHRPLHVQRPSIPPASDTEKPLFPPAGNSVCHNHHNHNSIGKQVPSSTNANLNNANMSKVVPGKRPSIGNLEHVSENGHHSSHKHGREPHRRSSIKRSDSGDEQFPTICREDPEIHSYFRDPRCLGEREYFSGEECYEDDSSPTGSRQSYGCGYYNRYPGSSLDFERPRGYHHPQSFSEDDDSPVCYDSRRSPRRRLLPPTPTSHRRSSFNFECLRRQSSQEEVPPSPAFPHRTALPLHLMQQQIMAVAGLDSSKAQKYSPSHSTRSWATPPATPSYRDWTPCYTPLIQVERSEALDQVNGSLPSLHRSSWYTDEPGISYRTFTPASLTVPGSFHSKNSDKQRSADSLVEAVLISEGLGRYARDPKFVSATKHEIADACDLTIDEMESAASNLLNGNMHPRANGDVGPIAHRQDYELQDFGPGYSDEEPDPGRDEEDLADEMICITTL", "length": 2139, "header": "tr|A0A480Y640-1|A0A5G2QBW7_PIG Computationally mapped isoform of Voltage-dependent L-type calcium channel subunit alpha OS=Sus scrofa OX=9823 GN=CACNA1D PE=3 SV=1 CANONICAL=A0A5G2QBW7-1" }, "locus": { "chromosome": "13", "start_pos": 35907910, "end_pos": 35569068, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077179.1", "url": "https://www.ensembl.org/id/ENSSSCT00000077179.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062830.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062830.1" } ] } }, { "isoform_ac": "A0A5G2QAP8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAP8/entry", "sequence": { "sequence": "MMMMMMMKKMQHQRQQQADHANEANYARGTRLPLSGEGPTSQSNNSKQTVLSWQAAIDAARQAKAAQTMSTSAPPPVGSLSQRKRQQYAKSKKQGNSSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLEKVEYAFLIIFTVETFLKIIAYGLLLHPNAYVRNGWNLLDFVIVIVGLFSVILEQLTKETEGGNHSSGKSGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHKTCFFADSDIVAEEDPAPCAFSGNGRQCTANGTECRSGWVGPNGGITNFDNFAFAMLTVFQCITMEGWTDVLYWVNDAIGWEWPWVYFVSLIILGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEGGEESKRNTSMPTSETESVNTENVSGEGENQGCCGSLCQAISKSKLSRRWRRWNRFNRRRCRAAVKSVTFYWLVIVLVFLNTLTISSEHYNQPDWLTQIQDIANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGITETILVELEIMSPLGISVFRCVRLLRIFKVTRHWTSLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQKEEAEEKERKKIARKESLENKKNNKPEVNQIANSDNKVTIDDYREEDEDKDPYPPCDVPVGEEEEEEEEDEPEVPAGPRPRRISELNMKEKIAPIPEGSAFFILSKTNPIRVGCHKLINHHIFTNLILVFIMLSSAALAAEDPIRSHSFRNTILGYFDYAFTAIFTVEILLKMTTFGAFLHKGAFCRNYFNLLDMLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQNSDFNFDNVLSAMMALFTVSTFEGWPALLYKAIDSNGENVGPIYNYRVEISIFFIIYIIIVAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYEQSKMFNDAMDILNMVFTGVFTVEMVLKVIAFKPKGYFSDAWNTFDSLIVIGSIVDVALSEADPTESESVPVPTATPGNSEESNRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQMFGKVAMRDNNQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPGKLCDPESDYNPGEEYTCGSNFAIVYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKKTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEQGLVGKYPAKNSTIALQMLERML", "length": 1647, "header": "tr|A0A5G2QAP8-1|A0A5G2QAP8_PIG Computationally mapped isoform of Voltage-dependent L-type calcium channel subunit alpha OS=Sus scrofa OX=9823 GN=CACNA1D PE=3 SV=1 CANONICAL=A0A5G2QBW7-1" }, "locus": { "chromosome": "13", "start_pos": 35888701, "end_pos": 35569068, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078248.2", "url": "https://www.ensembl.org/id/ENSSSCT00000078248.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061092.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061092.1" } ] } }, { "isoform_ac": "A0A5G2QBW7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBW7/entry", "sequence": { "sequence": "MMMMMMMKKMQHQRQQQADHANEANYARGTRLPLSGEGPTSQSNNSKQTVLSWQAAIDAARQAKAAQTMSTSAPPPVGSLSQRKRQQYAKSKKQGNSSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLEKVEYAFLIIFTVETFLKIIAYGLLLHPNAYVRNGWNLLDFVIVIVGLFSVILEQLTKETEGGNHSSGKSGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHKTCFFADSDIVAEEDPAPCAFSGNGRQCTANGTECRSGWVGPNGGITNFDNFAFAMLTVFQCITMEGWTDVLYWMNDAMGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEGGEESKRNTSMPTSETESVNTENVSGEGENQGCCGSLCQAISKSKLSRRWRRWNRFNRRRCRAAVKSVTFYWLVIVLVFLNTLTISSEHYNQPDWLTQIQDIANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGITETILVELEIMSPLGISVFRCVRLLRIFKVTRHWTSLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQKEEAEEKERKKIARKESLENKKNNKPEVNQIANSDNKVTIDDYREEDEDKDPYPPCDVPVGEEEEEEEEDEPEVPAGPRPRRISELNMKEKIAPIPEGSAFFILSKTNPIRVGCHKLINHHIFTNLILVFIMLSSAALAAEDPIRSHSFRNTILGYFDYAFTAIFTVEILLKMTTFGAFLHKGAFCRNYFNLLDMLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQNSDFNFDNVLSAMMALFTVSTFEGWPALLYKAIDSNGENVGPIYNYRVEISIFFIIYIIIVAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYEQSKMFNDAMDILNMVFTGVFTVEMVLKVIAFKPKGYFSDAWNTFDSLIVIGSIVDVALSEADPTESESVPVPTATPGNSEESNRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQMFGKVAMRDNNQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPGKLCDPESDYNPGEEYTCGSNFAIVYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKKTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEQGLVGKYPAKNSTIALQAGLRTLHDIGPEIRRAISCDLQDDEPEETKREEEEDVFKRNGALLGNHVNHVNSDRRESLQQTNTTHRPLHVQRPSIPPASDTEKPLFPPAGNSVCHNHHNHNSIGKQVPSSTNANLNNANMSKVVPGKRPSIGNLEHVSENGHHSSHKHGREPHRRSSIKRARYYETYIRSDSGDEQFPTICREDPEIHSYFRDPRCLGEREYFSGEECYEDDSSPTGSRQSYGCGYYNRYPGSSLDFERPRGYHHPQSFSEDDDSPVCYDSRRSPRRRLLPPTPTSHRRSSFNFECLRRQSSQEEVPPSPAFPHRTALPLHLMQQQIMAVAGLDSSKAQKYSPSHSTRSWATPPATPSYRDWTPCYTPLIQVERSEALDQVNGSLPSLHRSSWYTDEPGISYRTFTPASLTVPGSFHSKNSDKQRSADSLVEAVLISEGLGRYARDPKFVSATKHEIADACDLTIDEMESAASNLLNGNMHPRANGDVGPIAHRQDYELQDFGPGYSDEEPDPGRDEEDLADEMICITTL", "length": 2163, "header": "tr|A0A5G2QBW7-1|A0A5G2QBW7_PIG Isoform 1 of Voltage-dependent L-type calcium channel subunit alpha OS=Sus scrofa OX=9823 GN=CACNA1D PE=3 SV=1 CANONICAL=A0A5G2QBW7-1" }, "locus": { "chromosome": "13", "start_pos": 35907910, "end_pos": 35569068, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088208.1", "url": "https://www.ensembl.org/id/ENSSSCT00000088208.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061008.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061008.1" } ] } }, { "isoform_ac": "A0A5G2QE81-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE81/entry", "sequence": { "sequence": "MMMMMMMKKMQHQRQQQADHANEANYARGTRLPLSGEGPTSQSNNSKQTVLSWQAAIDAARQAKAAQTMSTSAPPPVGSLSQRKRQQYAKSKKQGNSSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLEKVEYAFLIIFTVETFLKIIAYGLLLHPNAYVRNGWNLLDFVIVIVGLFSVILEQLTKETEGGNHSSGKSGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHKTCFFADSDIVAEEDPAPCAFSGNGRQCTANGTECRSGWVGPNGGITNFDNFAFAMLTVFQCITMEGWTDVLYWVNDAIGWEWPWVYFVSLIILGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEGGEESKRNTSMPTSETESVNTENVSGEGENQGCCGSLWCWWRRRGAAKAGPSGCRRWGQAISKSKLSRRWRRWNRFNRRRCRAAVKSVTFYWLVIVLVFLNTLTISSEHYNQPDWLTQIQDIANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGITETILVELEIMSPLGISVFRCVRLLRIFKVTRHWTSLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQKEEAEEKERKKIARKESLENKKNNKPEVNQIANSDNKVTIDDYREEDEDKDPYPPCDVPVGEEEEEEEEDEPEVPAGPRPRRISELNMKEKIAPIPEGSAFFILSKTNPIRVGCHKLINHHIFTNLILVFIMLSSAALAAEDPIRSHSFRNTILGYFDYAFTAIFTVEILLKMTTFGAFLHKGAFCRNYFNLLDMLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQNSDFNFDNVLSAMMALFTVSTFEGWPALLYKAIDSNGENVGPIYNYRVEISIFFIIYIIIVAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYEQSKMFNDAMDILNMVFTGVFTVEMVLKVIAFKPKGYFSDAWNTFDSLIVIGSIVDVALSEADPTESESVPVPTATPGNSEESNRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQMFGKVAMRDNNQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPGKLCDPESDYNPGEEYTCGSNFAIVYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKKTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEQGLVGKYPAKNSTIALQAGLRTLHDIGPEIRRAISCDLQDDEPEETKREEEEDVFKRNGALLGNHVNHVNSDRRESLQQTNTTHRPLHVQRPSIPPASDTEKPLFPPAGNSVCHNHHNHNSIGKQVPSSTNANLNNANMSKVVPGKRPSIGNLEHVSENGHHSSHKHGREPHRRSSIKRARYYETYIRSDSGDEQFPTICREDPEIHSYFRDPRCLGEREYFSGEECYEDDSSPTGSRQSYGCGYYNRYPGSSLDFERPRGYHHPQSFSEDDDSPVCYDSRRSPRRRLLPPTPTSHRRSSFNFECLRRQSSQEEVPPSPAFPHRTALPLHLMQQQIMAVAGLDSSKAQKYSPSHSTRSWATPPATPSYRDWTPCYTPLIQVERSEALDQVNGSLPSLHRSSWYTDEPGISYRTFTPASLTVPGSFHSKNSDKQRSADSLVEAVLISEGLGRYARDPKFVSATKHEIADACDLTIDEMESAASNLLNGNMHPRANGDVGPIAHRQDYELQDFGPGYSDEEPDPGRDEEDLADEMICITTL", "length": 2183, "header": "tr|A0A5G2QE81-1|A0A5G2QBW7_PIG Computationally mapped isoform of Voltage-dependent L-type calcium channel subunit alpha OS=Sus scrofa OX=9823 GN=CACNA1D PE=3 SV=1 CANONICAL=A0A5G2QBW7-1" }, "locus": { "chromosome": "13", "start_pos": 35907910, "end_pos": 35569068, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087476.1", "url": "https://www.ensembl.org/id/ENSSSCT00000087476.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060350.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060350.1" } ] } }, { "isoform_ac": "A0A5G2QHN5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHN5/entry", "sequence": { "sequence": "MEMNLPAFSSDLILIKNALYQETDGRYKGKVVSEVETKGYLAQVIREANYARGTRLPLSGEGPTSQSNNSKQTVLSWQAAIDAARQAKAAQTMSTSAPPPVGSLSQRKRQQYAKSKKQGNSSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLEKVEYAFLIIFTVETFLKIIAYGLLLHPNAYVRNGWNLLDFVIVIVGLFSVILEQLTKETEGGNHSSGKSGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHKTCFFADSDIVAEEDPAPCAFSGNGRQCTANGTECRSGWVGPNGGITNFDNFAFAMLTVFQCITMEGWTDVLYWVNDAIGWEWPWVYFVSLIILGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEGGEESKRNTSMPTSETESVNTENVSGEGENQGCCGSLCQAISKSKLSRRWRRWNRFNRRRCRAAVKSVTFYWLVIVLVFLNTLTISSEHYNQPDWLTQIQDIANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGITETILVELEIMSPLGISVFRCVRLLRIFKVTRHWTSLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQKEEAEEKERKKIARKESLENKKNNKPEVNQIANSDNKVTIDDYREEDEDKDPYPPCDVPVGEEEEEEEEDEPEVPAGPRPRRISELNMKEKIAPIPEGSAFFILSKTNPIRVGCHKLINHHIFTNLILVFIMLSSAALAAEDPIRSHSFRNTILGYFDYAFTAIFTVEILLKMTTFGAFLHKGAFCRNYFNLLDMLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQNSDFNFDNVLSAMMALFTVSTFEGWPALLYKAIDSNGENVGPIYNYRVEISIFFIIYIIIVAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYEQSKMFNDAMDILNMVFTGVFTVEMVLKVIAFKPKGYFSDAWNTFDSLIVIGSIVDVALSEADNSEESNRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQMFGKVAMRDNNQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPGKLCDPESDYNPGEEYTCGSNFAIVYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKKTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEQGLVGKYPAKNSTIALQAGLRTLHDIGPEIRRAISCDLQDDEPEETKREEEEDVFKRNGALLGNHVNHVNSDRRESLQQTNTTHRPLHVQRPSIPPASDTEKPLFPPAGNSVCHNHHNHNSIGKQVPSSTNANLNNANMSKVVPGKRPSIGNLEHVSENGHHSSHKHGREPHRRSSIKRARYYETYIRSDSGDEQFPTICREDPEIHSYFRDPRCLGEREYFSGEECYEDDSSPTGSRQSYGCGYYNRYPGSSLDFERPRGYHHPQSFSEDDDSPVCYDSRRSPRRRLLPPTPTSHRRSSFNFECLRRQSSQEEVPPSPAFPHRTALPLHLMQQQIMAVAGLDSSKAQKYSPSHSTRSWATPPATPSYRDWTPCYTPLIQVERSEALDQVNGSLPSLHRSSWYTDEPGISYRTFTPASLTVPGSFHSKNSDKQRSADSLVEAVLISEGLGRYARDPKFVSATKHEIADACDLTIDEMESAASNLLNGNMHPRANGDVGPIAHRQDYELQDFGPGYSDEEPDPGRDEEDLADEMICITTL", "length": 2172, "header": "tr|A0A5G2QHN5-1|A0A5G2QHN5_PIG Computationally mapped isoform of Voltage-dependent L-type calcium channel subunit alpha OS=Sus scrofa OX=9823 GN=CACNA1D PE=3 SV=1 CANONICAL=A0A5G2QBW7-1" }, "locus": { "chromosome": "13", "start_pos": 35907910, "end_pos": 35436519, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080998.1", "url": "https://www.ensembl.org/id/ENSSSCT00000080998.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061503.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061503.1" } ] } }, { "isoform_ac": "A0A5G2QZ70-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZ70/entry", "sequence": { "sequence": "MMMMMMMKKMQHQRQQQADHANEANYARGTRLPLSGEGPTSQSNNSKQTVLSWQAAIDAARQAKAAQTMSTSAPPPVGSLSQRKRQQYAKSKKQGNSSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLEKVEYAFLIIFTVETFLKIIAYGLLLHPNAYVRNGWNLLDFVIVIVGLFSVILEQLTKETEGGNHSSGKSGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHKTCFFADSDIVAEEDPAPCAFSGNGRQCTANGTECRSGWVGPNGGITNFDNFAFAMLTVFQCITMEGWTDVLYWVNDAIGWEWPWVYFVSLIILGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEGGEESKRNTSMPTSETESVNTENVSGEGENQGCCGSLCQAISKSKLSRRWRRWNRFNRRRCRAAVKSVTFYWLVIVLVFLNTLTISSEHYNQPDWLTQIQDIANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGITETILVELEIMSPLGISVFRCVRLLRIFKVTRHWTSLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQKEEAEEKERKKIARKESLENKKNNKPEVNQIANSDNKVTIDDYREEDEDKDPYPPCDVPVGEEEEEEEEDEPEVPAGPRPRRISELNMKEKIAPIPEGSAFFILSKTNPIRVGCHKLINHHIFTNLILVFIMLSSAALAAEDPIRSHSFRNTILGYFDYAFTAIFTVEILLKMTTFGAFLHKGAFCRNYFNLLDMLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQNSDFNFDNVLSAMMALFTVSTFEGWPALLYKAIDSNGENVGPIYNYRVEISIFFIIYIIIVAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYEQSKMFNDAMDILNMVFTGVFTVEMVLKVIAFKPKGYFSDAWNTFDSLIVIGSIVDVALSEADNSEESNRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQMFGKVAMRDNNQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPGKLCDPESDYNPGEEYTCGSNFAIVYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKKTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEQGLVGKYPAKNSTIALQAGLRTLHDIGPEIRRAISCDLQDDEPEETKREEEEDVFKRNGALLGNHVNHVNSDRRESLQQTNTTHRPLHVQRPSIPPASDTEKPLFPPAGNSVCHNHHNHNSIGKQVPSSTNANLNNANMSKVVPGKRPSIGNLEHVSENGHHSSHKHGREPHRRSSIKRARYYETYIRSDSGDEQFPTICREDPEIHSYFRDPRCLGEREYFSGEECYEDDSSPTGSRQSYGCGYYNRYPGSSLDFERPRGYHHPQSFSEDDDSPVCYDSRRSPRRRLLPPTPTSHRRSSFNFECLRRQSSQEEVPPSPAFPHRTALPLHLMQQQIMAVAGLDSSKAQKYSPSHSTRSWATPPATPSYRDWTPCYTPLIQVERSEALDQVNGSLPSLHRSSWYTDEPGISYRTFTPASLTVPGSFHSKNSDKQRSADSLVEAVLISEGLGRYARDPKFVSATKHEIADACDLTIDEMESAASNLLNGNMHPRANGDVGPIAHRQDYELQDFGPGYSDEEPDPGRDEEDLADEMICITTL", "length": 2148, "header": "tr|A0A5G2QZ70-1|A0A5G2QBW7_PIG Computationally mapped isoform of Voltage-dependent L-type calcium channel subunit alpha OS=Sus scrofa OX=9823 GN=CACNA1D PE=3 SV=1 CANONICAL=A0A5G2QBW7-1" }, "locus": { "chromosome": "13", "start_pos": 35907910, "end_pos": 35569068, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000085788.1", "url": "https://www.ensembl.org/id/ENSSSCT00000085788.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070191.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070191.1" } ] } }, { "isoform_ac": "A0A5G2R9Q1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9Q1/entry", "sequence": { "sequence": "MMMMMMMKKMQHQRQQQADHANEANYARGTRLPLSGEGPTSQSNNSKQTVLSWQAAIDAARQAKAAQTMSTSAPPPVGSLSQRKRQQYAKSKKQGNSSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLEKVEYAFLIIFTVETFLKIIAYGLLLHPNAYVRNGWNLLDFVIVIVGLFSVILEQLTKETEGGNHSSGKSGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHKTCFFADSDIVAEEDPAPCAFSGNGRQCTANGTECRSGWVGPNGGITNFDNFAFAMLTVFQCITMEGWTDVLYWVNDAIGWEWPWVYFVSLIILGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEGGEESKRNTSMPTSETESVNTENVSGEGENQGCCGSLCQAISKSKLSRRWRRWNRFNRRRCRAAVKSVTFYWLVIVLVFLNTLTISSEHYNQPDWLTQIQDIANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGITETILVELEIMSPLGISVFRCVRLLRIFKVTRHWTSLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQKEEAEEKERKKIARKESLENKKNNKPEVNQIANSDNKVTIDDYREEDEDKDPYPPCDVPVGEEEEEEEEDEPEVPAGPRPRRISELNMKEKIAPIPEGSAFFILSKTNPIRVGCHKLINHHIFTNLILVFIMLSSAALAAEDPIRSHSFRNTILGYFDYAFTAIFTVEILLKMTTFGAFLHKGAFCRNYFNLLDMLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQNSDFNFDNVLSAMMALFTVSTFEGWPALLYKAIDSNGENVGPIYNYRVEISIFFIIYIIIVAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYEQSKMFNDAMDILNMVFTGVFTVEMVLKVIAFKPKNSEESNRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQMFGKVAMRDNNQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPGKLCDPESDYNPGEEYTCGSNFAIVYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKKTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEQGLVGKYPAKNSTIALQAGLRTLHDIGPEIRRAISCDLQDDEPEETKREEEEDVFKRNGALLGNHVNHVNSDRRESLQQTNTTHRPLHVQRPSIPPASDTEKPLFPPAGNSVCHNHHNHNSIGKQVPSSTNANLNNANMSKVVPGKRPSIGNLEHVSENGHHSSHKHGREPHRRSSIKRSDSGDEQFPTICREDPEIHSYFRDPRCLGEREYFSGEECYEDDSSPTGSRQSYGCGYYNRYPGSSLDFERPRGYHHPQSFSEDDDSPVCYDSRRSPRRRLLPPTPTSHRRSSFNFECLRRQSSQEEVPPSPAFPHRTALPLHLMQQQIMAVAGLDSSKAQKYSPSHSTRSWATPPATPSYRDWTPCYTPLIQVERSEALDQVNGSLPSLHRSSWYTDEPGISYRTFTPASLTVPGSFHSKNSDKQRSADSLVEAVLISEGLGRYARDPKFVSATKHEIADACDLTIDEMESAASNLLNGNMHPRANGDVGPIAHRQDYELQDFGPGYSDEEPDPGRDEEDLADEMICITTL", "length": 2111, "header": "tr|A0A5G2R9Q1-1|A0A5G2QBW7_PIG Computationally mapped isoform of Voltage-dependent L-type calcium channel subunit alpha OS=Sus scrofa OX=9823 GN=CACNA1D PE=3 SV=1 CANONICAL=A0A5G2QBW7-1" }, "locus": { "chromosome": "13", "start_pos": 35907910, "end_pos": 35569068, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000085831.1", "url": "https://www.ensembl.org/id/ENSSSCT00000085831.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070859.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070859.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1303, "start_aa": "Thr", "end_pos": 1303, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1303", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1989, "start_aa": "Thr", "end_pos": 1989, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1989", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 329, "start_aa": "Asn", "end_pos": 329, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn329", "evidence": [ { "id": "A0A5G2QZ70", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZ70#ptm_processing" }, { "id": "PIRSR602077-3", "database": "PIR Site Rule", "url": "https://proteininformationresource.org/cgi-bin/pirrule?id=PIRSR602077-3" }, { "id": "A0A480Y640", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A480Y640#ptm_processing" }, { "id": "A0A5G2QBW7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBW7#ptm_processing" }, { "id": "A0A5G2QE81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE81#ptm_processing" }, { "id": "A0A5G2QAP8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAP8#ptm_processing" }, { "id": "A0A5G2R9Q1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9Q1#ptm_processing" } ], "filter_code": "001000000000000000000.00010000000000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 40, "start_aa": "Thr", "end_pos": 40, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr40", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QE81", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE81" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100511102", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511102", "resource": "KEGG Pathway" }, { "id": "R-SSC-422356", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-422356", "resource": "Reactome", "description": 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"https://www.ebi.ac.uk/interpro/entry/IPR011989", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR024931", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024931", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032413", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032413", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036975", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036975", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "EMIQMLY", "url": "https://omabrowser.org/oma/group/EMIQMLY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VYA1", "url": "https://www.orthodb.org/?gene=A0A4X1VYA1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23316", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23316", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00514", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00514", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01749", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01749", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16186", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16186", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-68616", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-68616", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020951465", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020951465", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AEI6", "url": "https://www.uniprot.org/uniprotkb/A0A287AEI6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AEI6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AEI6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VYA1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYA1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VYA1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYA1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q7J1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7J1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q7J1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7J1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QUV4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUV4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QUV4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUV4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FN98", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FN98", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FN98-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FN98-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "METMASPGKDNYRMKSYKNNALNPEEMRRRREEEGIQLRKQKREQQLFKRRNVELINEEAAMFDSLLMDSYVSSTTGESVITREMVEMLFSDDSDLQLATTQKFRKLLSKEPSPPIDEVINTPGVVDRFVEFLKRNENCTLQFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVCRDYVLGCSILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPCLPVLSRLLFSSDSDLLADACWALSYLSDGPNEKIQAVIDSGVCRRLVELLMHNDNKVASPALRAVGNIVTGDDIQTQVILNCSALPCLLHLLSSSKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEGKRSGSGVNPYCGLIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEDDDSSLAPQVDETQQQFIFQQPEAPMEGFQL", "length": 536, "header": "tr|A0A4X1VYA1-1|A0A4X1VYA1_PIG Isoform 1 of Importin subunit alpha OS=Sus scrofa OX=9823 GN=KPNA6 PE=1 SV=1 CANONICAL=A0A4X1VYA1-1" }, "isoforms": [ { "isoform_ac": "A0A287AEI6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AEI6/entry", "sequence": { "sequence": "MESYTMASPGKDNYRMKSYKNNALNPEEMRRRREEEGIQLRKQKREQQLFKRRNVELINEEAAMFDSLLMDSYVSSTTGESVITREMVEMLFSDDSDLQLATTQKFRKLLSKEPSPPIDEVINTPGVVDRFVEFLKRNENCTLQFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVCRDYVLGCSILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPCLPVLSRLLFSSDSDLLADACWALSYLSDGPNEKIQAVIDSGVCRRLVELLMHNDNKVASPALRAVGNIVTGDDIQTQVILNCSALPCLLHLLSSSKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEGKRSGSGVNPYCGLIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEDDDSSLAPQVDETQQQFIFQQPEAPMEGFQL", "length": 538, "header": "tr|A0A287AEI6-1|A0A4X1VYA1_PIG Computationally mapped isoform of Importin subunit alpha OS=Sus scrofa OX=9823 GN=KPNA6 PE=1 SV=3 CANONICAL=A0A4X1VYA1-1" }, "locus": { "chromosome": "6", "start_pos": 88651261, "end_pos": 88636165, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055919.3", "url": "https://www.ensembl.org/id/ENSSSCT00000055919.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000042432.2", "url": "https://www.ensembl.org/id/ENSSSCP00000042432.2" } ] } }, { "isoform_ac": "A0A4X1VYA1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYA1/entry", "sequence": { "sequence": "METMASPGKDNYRMKSYKNNALNPEEMRRRREEEGIQLRKQKREQQLFKRRNVELINEEAAMFDSLLMDSYVSSTTGESVITREMVEMLFSDDSDLQLATTQKFRKLLSKEPSPPIDEVINTPGVVDRFVEFLKRNENCTLQFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVCRDYVLGCSILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPCLPVLSRLLFSSDSDLLADACWALSYLSDGPNEKIQAVIDSGVCRRLVELLMHNDNKVASPALRAVGNIVTGDDIQTQVILNCSALPCLLHLLSSSKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEGKRSGSGVNPYCGLIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEDDDSSLAPQVDETQQQFIFQQPEAPMEGFQL", "length": 536, "header": "tr|A0A4X1VYA1-1|A0A4X1VYA1_PIG Isoform 1 of Importin subunit alpha OS=Sus scrofa OX=9823 GN=KPNA6 PE=1 SV=1 CANONICAL=A0A4X1VYA1-1" }, "locus": { "chromosome": "6", "start_pos": 88651261, "end_pos": 88611521, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105744.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105744.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078999.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078999.1" } ] } }, { "isoform_ac": "A0A5G2Q7J1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7J1/entry", "sequence": { "sequence": "LETMASPGKDNYRMKSYKNNALNPEEMRRRREEEGIQLRKQKREQQLFKRRNVELINEEAAMFDSLLMDSYVSSTTGESVITREMVEMLFSDDSDLQLATTQKFRKLLSKEPSPPIDEVINTPGVVDRFVEFLKRNENCTLQFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVCRDYVLGCSILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPCLPVLSRLLFSSDSDLLADACWALSYLSDGPNEKIQAVIDSGVCRRLVELLMHNDNKVASPALRAVGNIVTGDDIQTQVILNCSALPCLLHLLSSSKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRAVPVAYGGSQARDQMGAVLLAYARATITWDLSHVCDLYHSSWYLVSLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEGKRSGSGVNPYCGLIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEDDDSSLAPQVDETQQQFIFQQPEAPMEGFQL", "length": 578, "header": "tr|A0A5G2Q7J1-1|A0A4X1VYA1_PIG Computationally mapped isoform of Importin subunit alpha OS=Sus scrofa OX=9823 GN=KPNA6 PE=1 SV=2 CANONICAL=A0A4X1VYA1-1" }, "locus": { "chromosome": "6", "start_pos": 88651261, "end_pos": 88636482, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075914.2", "url": "https://www.ensembl.org/id/ENSSSCT00000075914.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059780.2", "url": "https://www.ensembl.org/id/ENSSSCP00000059780.2" } ] } }, { "isoform_ac": "A0A5G2QUV4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUV4/entry", "sequence": { "sequence": "MQGQSLTLELLHTLVQPKKKQKQNTFMDGEQTMASPGKDNYRMKSYKNNALNPEEMRRRREEEGIQLRKQKREQQLFKRRNVELINEEAAMFDSLLMDSYSVITREMVEMLFSDDSDLQLATTQKFRKLLSKEPSPPIDEVINTPGVVDRFVEFLKRNENCTLQFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVCRDYVLGCSILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPCLPVLSRLLFSSDSDLLADACWALSYLSDGPNEKIQAVIDSGVCRRLVELLMHNDNKVASPALRAVGNIVTGDDIQTQVILNCSALPCLLHLLSSSKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEGKRSGSGVNPYCGLIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEDDDSSLAPQVDETQQQFIFQQPEAPMEGFQL", "length": 558, "header": "tr|A0A5G2QUV4-1|A0A4X1VYA1_PIG Computationally mapped isoform of Importin subunit alpha OS=Sus scrofa OX=9823 GN=KPNA6 PE=1 SV=2 CANONICAL=A0A4X1VYA1-1" }, "locus": { "chromosome": "6", "start_pos": 88651261, "end_pos": 88622289, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068266.2", "url": "https://www.ensembl.org/id/ENSSSCT00000068266.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067924.2", "url": "https://www.ensembl.org/id/ENSSSCP00000067924.2" } ] } }, { "isoform_ac": "A0A8W4FN98-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FN98/entry", "sequence": { "sequence": "MKNHVSETMASPGKDNYRMKSYKNNALNPEEMRRRREEEGIQLRKQKREQQLFKRRNVELINEEAAMFDSLLMDSYVSSTTGESVITREMVEMLFSDDSDLQLATTQKFRKLLSKEPSPPIDEVINTPGVVDRFVEFLKRNENCTLQFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVCRDYVLGCSILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPCLPVLSRLLFSSDSDLLADACWALSYLSDGPNEKIQAVIDSGVCRRLVELLMHNDNKVASPALRAVGNIVTGDDIQTQVILNCSALPCLLHLLSSSKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEGKRSGSGVNPYCGLIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEDDDSSLAPQVDETQQQFIFQQPEAPMEGFQL", "length": 541, "header": "tr|A0A8W4FN98-1|A0A4X1VYA1_PIG Computationally mapped isoform of Importin subunit alpha OS=Sus scrofa OX=9823 GN=KPNA6 PE=1 SV=1 CANONICAL=A0A4X1VYA1-1" }, "locus": { "chromosome": "6", "start_pos": 88651261, "end_pos": 88628512, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000099672.1", "url": "https://www.ensembl.org/id/ENSSSCT00000099672.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079785.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079785.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FN98", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FN98" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-68616", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-68616", "resource": "Reactome", "description": "Assembly of the ORC complex at the origin of replication" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YV14-1", "protein_name": "Importin subunit alpha", "gene_name": "KPNA6", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQDKENQEPKRMLHADSMASPAKDNYRMKCYKNKALNPEEMRRRREEEGIQLRKQKREQQLFKRRNVELINEDASMFDSLLMDSYVSSTTCGEGVITREMVEMLFSDDPDLQLATTQKFRKLLSKEPNPPIDEVINTQGVVDRFVEFLKRSENCTLQFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVCRDYVLNCAILPPLLMLLTKSTRLTMTRNAVWALSNLCRGKSPPPEFDKVSPCLPVLSRLLFNSDSDLLADACWALSYLSDGPNEKIQAVIDSGVCRRLVELLMHNDYKVASPALRAVGNIVTGDDIQTQVILNCSALPCLLHLLSSPKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVNLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEANQSGTGINPYCSMIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEDDSALAPQVDENQQQFIFQQPEAPMEGFQL", "length": 550 }, "evidence": [ { "id": "A0A4X1VYA1", "url": "https://omabrowser.org/oma/group/A0A4X1VYA1/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E7F7U9-1", "protein_name": "Importin subunit alpha", "gene_name": "kpna6", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEPSGSPAKDNFRMNRYKNKALNLEEMRRRREEEGIQLRKQKREQQLFKRRNVELLGEEGGMFDSPLMDSYVSSTTAPDGVITRDMVEMLFSEDPELQLVTTQRFRKLLSKEPNPPIDEVISTPGVVNRFVEFLQKSTNCTLQFEAAWALTNIASGTSQQTKFVIEAGAVPVFIELLNSDFEDVQEQAVWALGNIAGDSAVCRDYVLNCNILPPLLVLLTKSTRLTMTRNAVWALSNLCRGKSPPPDFEKVSPCLPVLSRLLFSSDSDLLADACWALSYLSDGPNEKIQAVIDSGVCRRLVELLMHSDYKVASPSLRAVGNIVTGDDIQTQVVLNCSALPCLLHLLSSAKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVNLGCIKPLCDLLTVMDSKIVLVALNGLENILRLGEQEAKQNGSGLNPYCSLIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEEEDANLVPQVDENQQQFLFPQQEAPMEGFQL", "length": 537 }, "evidence": [ { "id": "A0A4X1VYA1", "url": "https://omabrowser.org/oma/group/A0A4X1VYA1/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "O35345-1", "protein_name": "Importin subunit alpha-7", "gene_name": "Kpna6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METMASPGKDNYRMKSYKNNALNPEEMRRRREEEGIQLRKQKREQQLFKRRNVELINEEAAMFDSLLMDSYVSSTTGESVITREMVEMLFSDDSDLQLATTQKFRKLLSKEPSPPIDEVINTPGVVDRFVEFLKRNENCTLQFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSLCRDYVLNCSILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPCLPVLSRLLFSSDSDLLADACWALSYLSDGPNEKIQAVIDSGVCRRLVELLMHNDYKVASPALRAVGNIVTGDDIQTQVILNCSALPCLLHLLSSSKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQESKRSGSGVNPYCGLIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEDDDSSLAPQVDETQQQFIFQQPEAPMEGFQL", "length": 536 }, "evidence": [ { "id": "A0A4X1VYA1", "url": "https://omabrowser.org/oma/group/A0A4X1VYA1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O60684-1", "protein_name": "Importin subunit alpha-7", "gene_name": "KPNA6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METMASPGKDNYRMKSYKNNALNPEEMRRRREEEGIQLRKQKREQQLFKRRNVELINEEAAMFDSLLMDSYVSSTTGESVITREMVEMLFSDDSDLQLATTQKFRKLLSKEPSPPIDEVINTPRVVDRFVEFLKRNENCTLQFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVCRDYVLNCSILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPCLPVLSRLLFSSDSDLLADACWALSYLSDGPNEKIQAVIDSGVCRRLVELLMHNDYKVASPALRAVGNIVTGDDIQTQVILNCSALPCLLHLLSSPKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEGKRSGSGVNPYCGLIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEDDDSSLAPQVDETQQQFIFQQPEAPMEGFQL", "length": 536 }, "evidence": [ { "id": "A0A4X1VYA1", "url": "https://omabrowser.org/oma/group/A0A4X1VYA1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "O76521-1", "protein_name": "Importin subunit alpha", "gene_name": "Kap-alpha1", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSASHKQRYKNAALDSTEMRRRREEVGIQLRKNKREQQLFKRRNVVLEPATSSTSAGVESNTDNEQQAADMHMADSSTGGQNEEAAGSGAQPSVINEEMIQMLFSGRENEQLEATQKFRKLLSRDPNPPIEEVIQKGIVPQFVTFLRNSANATLQFEAAWTLTNIASGTSQQTKVVIEAGAVPIFIDLLSSPHDDVQEQAVWALGNIAGDSPMCRDHLLGSGILEPLLHVLSNSDRITMIRNAVWTLSNLCRGKSPPADFAKISHGLPILARLLKYTDADVLSDTCWAIGYLSDGPNDKIQAVIDAGVCRRLVELLLHPQQNVSTAALRAVGNIVTGDDQQTQVILGYNALTCISHLLHSTAETIKKESCWTISNIAAGNREQIQALINANIFPQLMVIMQTAEFKTRKEAAWAITNATSSGTHEQIHYLVQVGCVPPMCDFLTVVDSDIVQVALNALENILKAGEKFQTRPNPYAITIEECGGLDKIEYLQAHENRDIYHKSFYIIEQYFGNEEEDSRVAPVAGTQQFEFDPDNMPSTGFNF", "length": 543 }, "evidence": [ { "id": "A0A4X1VYA1", "url": "https://omabrowser.org/oma/group/A0A4X1VYA1/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q02821-1", "protein_name": "Importin subunit alpha", "gene_name": "SRP1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MDNGTDSSTSKFVPEYRRTNFKNKGRFSADELRRRRDTQQVELRKAKRDEALAKRRNFIPPTDGADSDEEDESSVSADQQFYSQLQQELPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKIFNCQQNENDKIYEKAYKIIETYFGEEEDAVDETMAPQNAGNTFGFGSNVNQQFNFN", "length": 542 }, "evidence": [ { "id": "A0A4X1VYA1", "url": "https://omabrowser.org/oma/group/A0A4X1VYA1/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q0V7M0-1", "protein_name": "Importin subunit alpha-7", "gene_name": "KPNA6", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "METMASPGKDNYRMKSYKNNALNPEEMRRRREEEGIQLRKQKREQQLFKRRNVELINEEAAMFDSLLMDSYVSSTTGESVITREMVEMLFSDDPDLQLATTQKFRKLLSKEPSPPIDEVINTPGVVDRFVEFLKRNENCTLQFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVCRDYVLNCSILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPCLPVLSRLLFSSDSDLLADACWALSYLSDGPNEKIQAVIDSGVCRRLVELLMHNDNKVASPALRAVGNIVTGDDIQTQVILNCSALPCLLHLLSSSKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEGKRSGSGVNPYCGLIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEDDDSSLAPQVDETQQQFIFQQPEAPMEGFQL", "length": 536 }, "evidence": [ { "id": "A0A4X1VYA1", "url": "https://omabrowser.org/oma/group/A0A4X1VYA1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYA1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYA1" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYA1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYA1" } ], "pmid": "" }, { "name": "NLS-dependent protein nuclear import complex", "id": "GO:0042564", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042564", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYA1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYA1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "protein import into nucleus", "id": "GO:0006606", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006606", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYA1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYA1" } ], "pmid": "" }, { "name": "NLS-bearing protein import into nucleus", "id": "GO:0006607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006607", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYA1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYA1" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "nuclear import signal receptor activity", "id": "GO:0061608", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061608", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYA1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYA1" } ], "pmid": "" }, { "name": "nuclear localization sequence binding", "id": "GO:0008139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008139", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYA1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYA1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 138, "end_pos": 140, "annotation": "n_glycosylation_sequon" }, { "start_pos": 334, "end_pos": 336, "annotation": "n_glycosylation_sequon" }, { "start_pos": 362, "end_pos": 364, "annotation": "n_glycosylation_sequon" }, { "start_pos": 404, "end_pos": 406, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1VYA1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYA1" }, { "id": "PS51214", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51214" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "IBB", "eco_id": "ECO_0000259", "start_pos": 1, "end_pos": 60, "start_aa": "Met", "end_aa": "Ala", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 138, "end_pos": 140 }, { "start_pos": 334, "end_pos": 336 }, { "start_pos": 362, "end_pos": 364 }, { "start_pos": 404, "end_pos": 406 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QAU2-1", "uniprot_ac": "A0A5G2QAU2", "uniprot_id": "A0A5G2QAU2_PIG", "mass": { "chemical_mass": 23362.0, "monoisotopic_mass": 23362.0 }, "refseq": {}, "gene_names": [ { "name": "RAB4B", "type": "recommended", "evidence": [ { "id": "A0A5G2QAU2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAU2" } ] } ], "protein_names": [ { "name": "Ras-related protein Rab-4", "type": "recommended", "evidence": [ { "id": "A0A5G2QAU2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAU2/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Rabs cycle between an inactive GDP-bound form and an active GTP-bound form that is able to recruit to membranes different sets of downstream effectors directly responsible for vesicle formation, movement, tethering and fusion.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNF6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNF6#function" }, { "database": "UniProtKB", "id": "RU367055", "url": "https://www.uniprot.org/uniprotkb/RU367055#function" }, { "database": "UniProtKB", "id": "A0A5G2QAU2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAU2#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAU2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAU2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RAB4B", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAU2", "locus": { "chromosome": "6", "start_pos": 48999608, "end_pos": 48989172, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000002996", "url": "https://www.ensembl.org/id/ENSSSCG00000002996" } ] } } ], "crossref": [ { "id": "A0A5G2QAU2", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QAU2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000002995", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000002995", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "ENSSSCG00000002996", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000002996", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd04113", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04113", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001806", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001806", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005225", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005225", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041819", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041819", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050209", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050209", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR47979", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47979", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00071", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00071", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6798695", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798695", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8875656", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8875656", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "19669", "url": "https://www.rhea-db.org/rhea/19669", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QAU2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAU2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QAU2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAU2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QNF6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNF6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QNF6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNF6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QWD1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWD1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QWD1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWD1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1E2Y6", "url": "https://www.uniprot.org/uniprotkb/A0A8D1E2Y6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1E2Y6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1E2Y6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FFG4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FFG4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FFG4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FFG4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FL88", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FL88", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FL88-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FL88-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F2Z507", "url": "https://www.uniprot.org/uniprotkb/F2Z507", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F2Z507-1", "url": "https://www.uniprot.org/uniprotkb/F2Z507-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "GKHYFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERMGSGIQYGDASLRQLRQPRSAQAVAPQPCGC", "length": 211, "header": "tr|A0A5G2QAU2-1|A0A5G2QAU2_PIG Isoform 1 of Ras-related protein Rab-4 OS=Sus scrofa OX=9823 GN=RAB4B PE=1 SV=2 CANONICAL=A0A5G2QAU2-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QAU2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAU2/entry", "sequence": { "sequence": 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"MPVLFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERMGSGIQYGDASLRQLRQPRSAQAVAPQPCGC", "length": 173, "header": "tr|A0A5G2QWD1-1|A0A5G2QAU2_PIG Computationally mapped isoform of Ras-related protein Rab-4 OS=Sus scrofa OX=9823 GN=RAB4B PE=1 SV=2 CANONICAL=A0A5G2QAU2-1" }, "locus": { "chromosome": "6", "start_pos": 48994616, "end_pos": 48990970, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000086397.2", "url": "https://www.ensembl.org/id/ENSSSCT00000086397.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069259.2", "url": "https://www.ensembl.org/id/ENSSSCP00000069259.2" } ] } }, { "isoform_ac": "A0A8D1E2Y6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1E2Y6/entry", "sequence": { "sequence": 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"MDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENGEGRAGGQRRRGSAEDRGQVQGPAGSWLPRLCLAGERGDLIRGLGSNLRVATCELYDHAGPQFPHLESGNQNVASSCLMVKGGGP", "length": 224, "header": "tr|A0A8W4FFG4-1|A0A5G2QAU2_PIG Computationally mapped isoform of Ras-related protein Rab-4 OS=Sus scrofa OX=9823 GN=RAB4B PE=1 SV=1 CANONICAL=A0A5G2QAU2-1" }, "locus": { "chromosome": "6", "start_pos": 48992630, "end_pos": 48989847, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000094620.1", "url": "https://www.ensembl.org/id/ENSSSCT00000094620.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078057.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078057.1" } ] } }, { "isoform_ac": "A0A8W4FL88-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FL88/entry", "sequence": { "sequence": "DLRLPLQIPGDWQCGYWQQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERMGSGIQYGDASLRQLRQPRSAQAVAPQPCGC", "length": 197, "header": "tr|A0A8W4FL88-1|A0A5G2QAU2_PIG Computationally mapped isoform of Ras-related protein Rab-4 OS=Sus scrofa OX=9823 GN=RAB4B PE=1 SV=1 CANONICAL=A0A5G2QAU2-1" }, "locus": { "chromosome": "6", "start_pos": 48994616, "end_pos": 48989329, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092988.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092988.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080104.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080104.1" } ] } }, { "isoform_ac": "F2Z507-1", "url": "https://www.uniprot.org/uniprotkb/F2Z507/entry", "sequence": { "sequence": "DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENGEGRAGGQRRRGSAEDRGQVQGPAGSWLPRLCLAGERGDLIRGLGSNLRVATCELYDHAGPQFPHLESGNQNVASSCLMVKGGGP", "length": 223, "header": "tr|F2Z507-1|F2Z507_PIG Computationally mapped isoform of RAB4B, member RAS onco family OS=Sus scrofa OX=9823 GN=RAB4B PE=1 SV=4 CANONICAL=A0A5G2QAU2-1" }, "locus": { "chromosome": "6", "start_pos": 48992630, "end_pos": 48990779, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000003328.5", "url": "https://www.ensembl.org/id/ENSSSCT00000003328.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000003246.5", "url": "https://www.ensembl.org/id/ENSSSCP00000003246.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": 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"https://www.ncbi.nlm.nih.gov/protein/XP_005671838" } ] } ], "function": [ { "annotation": "Component of the ERLIN1/ERLIN2 complex which mediates the endoplasmic reticulum-associated degradation (ERAD) of inositol 1,4,5-trisphosphate receptors (IP3Rs) such as ITPR1. Promotes sterol-accelerated ERAD of HMGCR probably implicating an AMFR/gp78-containing ubiquitin ligase complex. Involved in regulation of cellular cholesterol homeostasis by regulation the SREBP signaling pathway. May promote ER retention of the SCAP-SREBF complex.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QQ72", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQ72#function" }, { "database": "UniProtKB", "id": "ARBA00045228", "url": "https://www.uniprot.org/uniprotkb/ARBA00045228#function" }, { "database": "UniProtKB", "id": "A0A287A8P3", "url": "https://www.uniprot.org/uniprotkb/A0A287A8P3#function" }, { "database": "UniProtKB", "id": "A0A287BRP6", "url": "https://www.uniprot.org/uniprotkb/A0A287BRP6#function" }, { "database": "UniProtKB", "id": "A0A4X1VVT9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVT9#function" }, { "database": "UniProtKB", "id": "A0A4X1VQ91", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VQ91#function" } ] }, { "annotation": "Mediates the endoplasmic reticulum-associated degradation (ERAD) of inositol 1,4,5-trisphosphate receptors (IP3Rs). Involved in regulation of cellular cholesterol homeostasis by regulation the SREBP signaling pathway.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QQ72", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQ72#function" }, { "database": "UniProtKB", "id": "RU369041", "url": "https://www.uniprot.org/uniprotkb/RU369041#function" }, { "database": "UniProtKB", "id": "A0A287A8P3", "url": "https://www.uniprot.org/uniprotkb/A0A287A8P3#function" }, { "database": "UniProtKB", "id": "A0A287BRP6", "url": "https://www.uniprot.org/uniprotkb/A0A287BRP6#function" }, { "database": "UniProtKB", "id": "A0A4X1VVT9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVT9#function" }, { "database": "UniProtKB", "id": "A0A4X1VQ91", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VQ91#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VVT9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVT9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ERLIN2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVT9", "locus": { "chromosome": "15", "start_pos": 48643724, "end_pos": 48662536, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000039480", "url": "https://www.ensembl.org/id/ENSSSCG00000039480" } ] } } ], "crossref": [ { "id": "A0A4X1VVT9", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VVT9", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000039480", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000039480", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd03406", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03406", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100233180", "url": "https://www.ncbi.nlm.nih.gov/gene/100233180", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001107", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001107", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR033294", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033294", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036013", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036013", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "YNMVRNF", "url": "https://omabrowser.org/oma/group/YNMVRNF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287BRP6", "url": "https://www.orthodb.org/?gene=A0A287BRP6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VVT9", "url": "https://www.orthodb.org/?gene=A0A4X1VVT9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15351", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15351", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15351:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15351:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01145", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01145", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-382556", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-382556", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9931269", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9931269", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_005671838", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005671838", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287A8P3", "url": "https://www.uniprot.org/uniprotkb/A0A287A8P3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A8P3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A8P3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BRP6", "url": "https://www.uniprot.org/uniprotkb/A0A287BRP6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BRP6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BRP6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VQ91", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VQ91", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VQ91-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VQ91-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VVT9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVT9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VVT9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVT9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QQ72", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQ72", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QQ72-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQ72-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAQLGAVVAVAASFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPHAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASNSKIYFGKDIPNMFMDSAGSLGKQFEGLTDKLSFGLEDEPLEAGTEEN", "length": 339, "header": "tr|A0A4X1VVT9-1|A0A4X1VVT9_PIG Isoform 1 of Erlin OS=Sus scrofa OX=9823 GN=ERLIN2 PE=1 SV=1 CANONICAL=A0A4X1VVT9-1" }, "isoforms": [ { "isoform_ac": "A0A287A8P3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A8P3/entry", "sequence": { "sequence": "MAQLGAVVAVAASFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVCDCAVPASSNSGGVMIYFDRIEVVNFLVPHAGTSLSLQSHTHTHRPQHQAPREGTVAVSQNTVSPSLLVLSLSFLSVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASNSKIYFGKDIPNMFMDSAGSLGKQFEGLTDKLSFGLEDEPLEAGTEEN", "length": 378, "header": "tr|A0A287A8P3-1|A0A4X1VVT9_PIG Computationally mapped isoform of Erlin OS=Sus scrofa OX=9823 GN=ERLIN2 PE=1 SV=2 CANONICAL=A0A4X1VVT9-1" }, "locus": { "chromosome": "15", "start_pos": 48661248, "end_pos": 48646990, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042337.3", "url": "https://www.ensembl.org/id/ENSSSCT00000042337.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000040247.3", "url": "https://www.ensembl.org/id/ENSSSCP00000040247.3" } ] } }, { "isoform_ac": "A0A287BRP6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BRP6/entry", "sequence": { "sequence": "MKGQRIPPWNSARMLSLSLQHLKGDKLSLMAQLGAVVAVAASFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPHAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASNSKIYFGKDIPNMFMDSAGSLGKQFEGLTDKLSFGLEDEPLEAGTEEN", "length": 368, "header": "tr|A0A287BRP6-1|A0A4X1VVT9_PIG Computationally mapped isoform of Erlin OS=Sus scrofa OX=9823 GN=ERLIN2 PE=1 SV=1 CANONICAL=A0A4X1VVT9-1" }, "locus": { "chromosome": "15", "start_pos": 48661816, "end_pos": 48646990, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054511.3", "url": "https://www.ensembl.org/id/ENSSSCT00000054511.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058853.1", "url": "https://www.ensembl.org/id/ENSSSCP00000058853.1" } ] } }, { "isoform_ac": "A0A4X1VQ91-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VQ91/entry", "sequence": { "sequence": "MAQLGAVVAVAASFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPHAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFALDNDLSQESSL", "length": 153, "header": "tr|A0A4X1VQ91-1|A0A4X1VVT9_PIG Computationally mapped isoform of Erlin OS=Sus scrofa OX=9823 GN=ERLIN2 PE=1 SV=1 CANONICAL=A0A4X1VVT9-1" }, "locus": { "chromosome": "15", "start_pos": 48661248, "end_pos": 48655620, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083533.1", "url": "https://www.ensembl.org/id/ENSSSCT00000083533.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074458.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074458.1" } ] } }, { "isoform_ac": "A0A4X1VVT9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVT9/entry", "sequence": { "sequence": "MAQLGAVVAVAASFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPHAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASNSKIYFGKDIPNMFMDSAGSLGKQFEGLTDKLSFGLEDEPLEAGTEEN", "length": 339, "header": "tr|A0A4X1VVT9-1|A0A4X1VVT9_PIG Isoform 1 of Erlin OS=Sus scrofa OX=9823 GN=ERLIN2 PE=1 SV=1 CANONICAL=A0A4X1VVT9-1" }, "locus": { "chromosome": "15", "start_pos": 48661248, "end_pos": 48646990, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038182.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038182.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058638.1", "url": "https://www.ensembl.org/id/ENSSSCP00000058638.1" } ] } }, { "isoform_ac": "A0A5G2QQ72-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQ72/entry", "sequence": { "sequence": "MAQLGAVVAVAASFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPHAGTSLSLQSHTHTHRPQHQAPREGTVAVSQNTVSPSLLVLSLSFLSVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASNSKIYFGKDIPNMFMDSAGSLGKQFEGLTDKLSFGLEDEPLEAGTEEN", "length": 384, "header": "tr|A0A5G2QQ72-1|A0A4X1VVT9_PIG Computationally mapped isoform of Erlin OS=Sus scrofa OX=9823 GN=ERLIN2 PE=1 SV=1 CANONICAL=A0A4X1VVT9-1" }, "locus": { "chromosome": "15", "start_pos": 48661248, "end_pos": 48646990, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067737.2", "url": "https://www.ensembl.org/id/ENSSSCT00000067737.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060433.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060433.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QQ72", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQ72" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-382556", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-382556", "resource": "Reactome", "description": "ABC-family protein mediated transport" }, { "id": "R-SSC-9931269", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9931269", "resource": "Reactome", "description": "AMPK-induced ERAD and lysosome mediated degradation of PD-L1(CD274)" } ], "orthologs": [ { "uniprot_canonical_ac": "A3QK16-1", "protein_name": "Erlin-2", "gene_name": "erlin2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTLGAVASLILAIGGAAVFSALHKIEEGHVGVYYRGGALLTATSGPGFHLMLPFITTFKSVQTTLQTDEVKNVPCGTGGGVMIYFDRIEVVNYLVPSAVYGIVRNFTADYDKALIFNKVHHELNQFCSVHTLQDVYIGLFDQIDENLKLTLQEDLTSMAPGLIIQAVRVTKPNIPESIRRNYELMESERTKLLIAAQTQKVVEKEAETERKKAVIEAEKVAQVAEIKFGQKVMEKETEKKISQIEDSAYLARQKAKADAEFYSAQRAAEANKLKLTPEYLQLMKFKAIAANSKIYFGSEIPHMFMDSGPGSSSSAASKAIDVLSEGMLDLE", "length": 331 }, "evidence": [ { "id": "A0A4X1VVT9", "url": "https://omabrowser.org/oma/group/A0A4X1VVT9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "B5DEH2-1", "protein_name": "Erlin-2", "gene_name": "Erlin2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPHAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAFLAREKAKADAECYTALKIAEANKLKLTPEYLQLMKYKAIASNSKIYFGKDIPNMFMDSAGGLGKQSEGLSDKLGFGLEDEPLETATKDN", "length": 339 }, "evidence": [ { "id": "A0A4X1VVT9", "url": "https://omabrowser.org/oma/group/A0A4X1VVT9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3H1G8-1", "protein_name": "Erlin", "gene_name": "Erlin2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAQLGAVVAVASSFFCASLFSSVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAFLAREKAKADAECYTALKIAEANKLKLTPEYLQLMKYKAIASNSKIYFGKDIPNMFMDSSGRLGKQFEGLTDKLGFSLEDEPLEVTTKDN", "length": 339 }, "evidence": [ { "id": "A0A4X1VVT9", "url": "https://omabrowser.org/oma/group/A0A4X1VVT9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "O94905-1", "protein_name": "Erlin-2", "gene_name": "ERLIN2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAQLGAVVAVASSFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAFLAREKAKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASNSKIYFGKDIPNMFMDSAGSVSKQFEGLADKLSFGLEDEPLETATKEN", "length": 339 }, "evidence": [ { "id": "A0A4X1VVT9", "url": "https://omabrowser.org/oma/group/A0A4X1VVT9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q1RMU4-1", "protein_name": "Erlin-2", "gene_name": "ERLIN2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": 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"A0A287ATI9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ATI9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VZJ2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZJ2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VZJ2-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZJ2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W082", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W082", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W082-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W082-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W1D7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W1D7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W1D7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W1D7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R5E5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5E5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R5E5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5E5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RA54", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RA54", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RA54-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RA54-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1S4D2", "url": "https://www.uniprot.org/uniprotkb/A0A8D1S4D2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1S4D2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1S4D2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPPYGTLTALLLLPPLLLLHAVLAVPLDRGASKEENPATESPDTGLYYHRYLQEVINVLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLLKAKMDAEQEPNVQLDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEEFKRYEMLKEHERRRYLESLGEEQRKEAEKKLEEQQRRHREHPKVNVPGSQAQLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLDEFLASTQRKEFGDTGEGWETVEMHPAYTEDELRRFEEELAAREAELNAKAQRLSQETEALGRSQGRLEAQKRELQQAVLQMEQRKQQQQGHKDPATGPEGQLKFHPDTDDAPVPAPAGDQKDVDASEKKVPEQTPELPQLDSQHL", "length": 457, "header": "tr|A0A4X1W1D7-1|A0A4X1W1D7_PIG Isoform 1 of Nucleobindin-1 OS=Sus scrofa OX=9823 GN=NUCB1 PE=1 SV=1 CANONICAL=A0A4X1W1D7-1" }, "isoforms": [ { "isoform_ac": "A0A287AHD5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AHD5/entry", "sequence": { "sequence": "MPPYGTLTALLLLPPLLLLHAVLAVPLDRGASKEENPATESPDTGLYYHRYLQEVINVLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLLKAKMDAEQEPNVQLDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEEFKRYEMLKEHERRRYLESLGEEQRKEAEKKLEEQQRRHREHPKVNVPGSQAQLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLDEFLASTQRKEFGDTGEGWETVEMHPAYTEDELRRFEEELAAREAELNAKAQRLSQETEALGRSQGRLEAQKRELQQAVLQMEQRKQQQQGHKDPATGPEGQLKFHPDTDDAPVPAPAGDQKDVDASEKKVPEQTPEAGQHL", "length": 453, "header": "tr|A0A287AHD5-1|A0A4X1W1D7_PIG Computationally mapped isoform of Nucleobindin-1 OS=Sus scrofa OX=9823 GN=NUCB1 PE=1 SV=2 CANONICAL=A0A4X1W1D7-1" }, "locus": { "chromosome": "6", "start_pos": 54208684, "end_pos": 54187692, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054984.2", "url": "https://www.ensembl.org/id/ENSSSCT00000054984.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043388.2", "url": "https://www.ensembl.org/id/ENSSSCP00000043388.2" } ] } }, { "isoform_ac": "A0A287ATI9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ATI9/entry", "sequence": { "sequence": "MGPLQPSYSCHLCCCCTLFWPCPWTGGRPSGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLLKAKMDAEQEPNVQLDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEEFKRYEMLKEHERRRYLESLGEEQRKEAEKKLEEQQRRHREHPKVNVPGSQAQLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLDEFLASTQRKEFGDTGEGWETVEMHPAYTEDELRRFEEELAAREAELNAKAQRLSQETEALGRSQGRLEAQKRELQQAVLQMEQRKQQQQGHKDPATGPEGQLKFHPDTDDAPVPAPAGDQKDVDASEKKVPEQTPELPQLDSQHL", "length": 408, "header": "tr|A0A287ATI9-1|A0A4X1W1D7_PIG Computationally mapped isoform of Nucleobindin-1 OS=Sus scrofa OX=9823 GN=NUCB1 PE=1 SV=1 CANONICAL=A0A4X1W1D7-1" }, "locus": { "chromosome": "6", "start_pos": 54208684, "end_pos": 54187702, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000057902.3", "url": "https://www.ensembl.org/id/ENSSSCT00000057902.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047182.2", "url": "https://www.ensembl.org/id/ENSSSCP00000047182.2" } ] } }, { "isoform_ac": "A0A4X1VZJ2-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZJ2/entry", "sequence": { "sequence": "MVKVKDTGLYYHRYLQEVINVLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLLKAKMDAEQEPNVQLDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEEFKRYEMLKEHERRRYLESLGEEQRKEAEKKLEEQQRRHREHPKVNVPGSQAQLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLDEFLASTQRKEFGDTGEGWETVEMHPAYTEDELRRFEEELAAREAELNAKAQRLSQETEALGRSQGRLEAQKRELQQAVLQMEQRKQQQQGHKDPATGPEGQLKFHPDTDDAPVPAPAGDQKDVDASEKKVPEQTPELPQLDSQHL", "length": 420, "header": "tr|A0A4X1VZJ2-1|A0A4X1VZJ2_PIG Computationally mapped isoform of Nucleobindin-1 OS=Sus scrofa OX=9823 GN=NUCB1 PE=1 SV=1 CANONICAL=A0A4X1W1D7-1" }, "locus": { "chromosome": "6", "start_pos": 54208684, "end_pos": 54188605, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000003496.5", "url": "https://www.ensembl.org/id/ENSSSCT00000003496.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000003413.3", "url": "https://www.ensembl.org/id/ENSSSCP00000003413.3" } ] } }, { "isoform_ac": "A0A4X1W082-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W082/entry", "sequence": { "sequence": "MPPYGTLTALLLLPPLLLLHAVLAVPLDRGASKEENPATESPDTGLYYHRYLQEVINVLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLLKAKMDAEQEPNVQLDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEEFKRYEMLKEHERRRYLESLGEEQRKEAEKKLEEQQRRHREHPKVNVPGSQAQLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKEVSDPGHGGGWAPGWREVQLFAYSYLAPQVDTNQDRLVTLDEFLASTQRKEFGDTGEGWETVEMHPAYTEDELRRFEEELAAREAELNAKAQRLSQETEALGRSQGRLEAQKRELQQAVLQMEQRKQQQQGHKDPATGPEGQLKFHPDTDDAPVPAPAGDQKDVDASEKKVPEQTPELPQLDSQHL", "length": 454, "header": "tr|A0A4X1W082-1|A0A4X1W082_PIG Computationally mapped isoform of Nucleobindin-1 OS=Sus scrofa OX=9823 GN=NUCB1 PE=1 SV=1 CANONICAL=A0A4X1W1D7-1" }, "locus": { "chromosome": "6", "start_pos": 54208684, "end_pos": 54187692, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078336.2", "url": "https://www.ensembl.org/id/ENSSSCT00000078336.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067125.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067125.1" } ] } }, { "isoform_ac": "A0A4X1W1D7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W1D7/entry", "sequence": { "sequence": "MPPYGTLTALLLLPPLLLLHAVLAVPLDRGASKEENPATESPDTGLYYHRYLQEVINVLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLLKAKMDAEQEPNVQLDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEEFKRYEMLKEHERRRYLESLGEEQRKEAEKKLEEQQRRHREHPKVNVPGSQAQLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLDEFLASTQRKEFGDTGEGWETVEMHPAYTEDELRRFEEELAAREAELNAKAQRLSQETEALGRSQGRLEAQKRELQQAVLQMEQRKQQQQGHKDPATGPEGQLKFHPDTDDAPVPAPAGDQKDVDASEKKVPEQTPELPQLDSQHL", "length": 457, "header": "tr|A0A4X1W1D7-1|A0A4X1W1D7_PIG Isoform 1 of Nucleobindin-1 OS=Sus scrofa OX=9823 GN=NUCB1 PE=1 SV=1 CANONICAL=A0A4X1W1D7-1" }, "locus": { "chromosome": "6", "start_pos": 54208684, "end_pos": 54187692, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055420.3", "url": "https://www.ensembl.org/id/ENSSSCT00000055420.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035778.1", "url": "https://www.ensembl.org/id/ENSSSCP00000035778.1" } ] } }, { "isoform_ac": "A0A5G2R5E5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5E5/entry", "sequence": { "sequence": "MGPLQPSYSCHLCCCCTLFWPCPWTGGGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLLKAKMDAEQEPNVQLDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEEFKRYEMLKEHERRRYLESLGEEQRKEAEKKLEEQQRRHREHPKVNVPGSQAQLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLDEFLASTQRKEFGDTGEGWETVEMHPAYTEDELRRFEEELAAREAELNAKAQRLSQETEALGRSQGRLEAQKRELQQAVLQMEQRKQQQQGHKDPATGPEGQLKFHPDTDDAPVPAPAGDQKDVDASEKKVPEQTPELPQLDSQHL", "length": 405, "header": "tr|A0A5G2R5E5-1|A0A4X1W1D7_PIG Computationally mapped isoform of Nucleobindin-1 OS=Sus scrofa OX=9823 GN=NUCB1 PE=1 SV=2 CANONICAL=A0A4X1W1D7-1" }, "locus": { "chromosome": "6", "start_pos": 54208684, "end_pos": 54187702, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070129.2", "url": "https://www.ensembl.org/id/ENSSSCT00000070129.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065804.2", "url": "https://www.ensembl.org/id/ENSSSCP00000065804.2" } ] } }, { "isoform_ac": "A0A5G2RA54-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RA54/entry", "sequence": { "sequence": "MPPYGTLTALLLLPPLLLLHAVLAVPLDRGASKEENPATESPDTGLYYHRYLQEVINVLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLLKAKMDAEQEPNVQLDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEEFKRYEMLKEHERRRYLESLGEEQRKEAEKKLEEQQRRHREHPKVNVPGSQAQLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLDEFLASTQRKEFGDTGEGWETVEMHPAYTEDELRRFEEELAAREAELNAKAQRLSQETEALGRSQGRLEAQKRELQQAVLQMEQRKQQQQGHKDPATGPEGQLKFHPDTGAGPGPRGQGESWVPRLLGLREEGLGCLVLPFPPPVSR", "length": 458, "header": "tr|A0A5G2RA54-1|A0A4X1W1D7_PIG Computationally mapped isoform of Nucleobindin-1 OS=Sus scrofa OX=9823 GN=NUCB1 PE=1 SV=1 CANONICAL=A0A4X1W1D7-1" }, "locus": { "chromosome": "6", "start_pos": 54208575, "end_pos": 54187692, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074980.1", "url": "https://www.ensembl.org/id/ENSSSCT00000074980.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074194.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074194.1" } ] } }, { "isoform_ac": "A0A8D1S4D2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1S4D2/entry", "sequence": { "sequence": "MSVYFTARQQIPACGSVGGLGPGVYLRGGHCLFPKDTGLYYHRYLQEVINVLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLLKAKMDAEQEPNVQLDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEEFKRYEMLKEHERRRYLESLGEEQRKEAEKKLEEQQRRHREHPKVNVPGSQAQLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLDEFLASTQRKEFGDTGEGWETVEMHPAYTEDELRRFEEELAAREAELNAKAQRLSQETEALGRSQGRLEAQKRELQQAVLQMEQRKQQQQGHKDPATGPEGQLKFHPDTDDAPVPAPAGDQKDVDASEKKVPEQTPELPQLDSQHL", "length": 450, "header": "tr|A0A8D1S4D2-1|A0A4X1W1D7_PIG Computationally mapped isoform of Nucleobindin-1 OS=Sus scrofa OX=9823 GN=NUCB1 PE=1 SV=1 CANONICAL=A0A4X1W1D7-1" }, "locus": { "chromosome": "6", "start_pos": 54208684, "end_pos": 54191076, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089853.2", "url": "https://www.ensembl.org/id/ENSSSCT00000089853.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069648.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069648.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D1S4D2", "url": "https://www.uniprot.org/uniprotkb/A0A8D1S4D2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100512538", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512538", "resource": "KEGG Pathway" }, { "id": "R-SSC-381426", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-381426", "resource": "Reactome", "description": "Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)" }, { "id": "R-SSC-8957275", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8957275", "resource": "Reactome", "description": "Post-translational protein phosphorylation" } ], "orthologs": [ { "uniprot_canonical_ac": "Q02818-1", "protein_name": "Nucleobindin-1", "gene_name": "NUCB1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPPSGPRGTLLLLPLLLLLLLRAVLAVPLERGAPNKEETPATESPDTGLYYHRYLQEVIDVLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLLKAKMDAEQDPNVQVDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEEFKRYEMLKEHERRRYLESLGEEQRKEAERKLEEQQRRHREHPKVNVPGSQAQLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQRKEFGDTGEGWETVEMHPAYTEEELRRFEEELAAREAELNAKAQRLSQETEALGRSQGRLEAQKRELQQAVLHMEQRKQQQQQQQGHKAPAAHPEGQLKFHPDTDDVPVPAPAGDQKEVDTSEKKLLERLPEVEVPQHL", "length": 461 }, "evidence": [ { "id": "A0A4X1W1D7", "url": "https://omabrowser.org/oma/group/A0A4X1W1D7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q02819-1", "protein_name": "Nucleobindin-1", "gene_name": "Nucb1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPTSVPRGAPFLLLPPLLMLSAVLAVPVDRAAPPQEDSQATETPDTGLYYHRYLQEVINVLETDGHFREKLQAANAEDIKSGKLSQELDFVSHNVRTKLDELKRQEVSRLRMLLKAKMDAKQEPNLQVDHMNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEEFKRYEMLKEHERRRYLESLGEEQRKEAERKLQEQQRRHREHPKVNVPGSQAQLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQRKEFGDTGEGWKTVEMSPAYTEEELKRFEEELAAREAELNARAQRLSQETEALGRSQDRLEAQKRELQQAVLQMEQRKQQLQEQSAPPSKPDGQLQFRADTDDAPVPAPAGDQKDVPASEKKVPEQPPELPQLDSQHL", "length": 459 }, "evidence": [ { "id": "A0A4X1W1D7", "url": "https://omabrowser.org/oma/group/A0A4X1W1D7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q0P569-1", "protein_name": "Nucleobindin-1", "gene_name": "NUCB1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPPSGPRAALFLLPSLLLLRAVLAVPLERGAPKEENPATESPDTGLYYHRYLQEVINVLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLLKAKMDAQQEPNIQLDHLNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEEFKRYEMLKEHERRRYLESLGEEQRKEAERKLEEQQRRHREHPKVNVPGSQAQLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEDDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQRKEFGDTGEGWEQGKAGVPLPMAPVLTLQTVEMHPAYTEEELRRFEEELAAREAELNAKAQRLSQETEALGRSQGRLEAQKRELQQAVLQMEQRKQQQQSHNNPAPGPEGQLKFHPDTDDVPVPAPAGDQKDVDASEKKVPEQTPEPPQLDSQHL", "length": 474 }, "evidence": [ { "id": "A0A4X1W1D7", "url": "https://omabrowser.org/oma/group/A0A4X1W1D7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q63083-1", "protein_name": "Nucleobindin-1", "gene_name": "Nucb1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPTSVPRGAPFLLLPPLLMLSAVLAVPVDRAAPHQEDNQATETPDTGLYYHRYLQEVINVLETDGHFREKLQAANAEDIKSGKLSQELDFVSHNVRTKLDELKRQEVSRLRMLLKAKMDAKQEPNLQVDHMNLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEEFKRYEMLKEHERRRYLESLGEEQRKEAERKLQEQQRRHREHPKVNVPGSQAQLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQRKEFGETAEGWKTVEMYPAYTEEELKRFEEELAAREAELNARAQRLSQETEALGRSQDRLEAQKRELQQAVLQMEQRKQQQQEQSAPPSQPDGQLQFRADTGDAPVPAPAGDQKDVPASEKKVPEQPPVLPQLDSQHL", "length": 459 }, "evidence": [ { "id": "A0A4X1W1D7", "url": "https://omabrowser.org/oma/group/A0A4X1W1D7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W1D7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W1D7" } ], "pmid": "" }, { "name": "calcium ion 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May play a role in liver resistance to GH during periods of reduced nutrient availability.", "evidence": [ { "database": "UniProtKB", "id": "A0A287AI52", "url": "https://www.uniprot.org/uniprotkb/A0A287AI52#function" }, { "database": "UniProtKB", "id": "ARBA00037298", "url": "https://www.uniprot.org/uniprotkb/ARBA00037298#function" }, { "database": "UniProtKB", "id": "A0A5G2Q7T8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7T8#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q7T8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7T8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LEPROTL1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7T8", "locus": { "chromosome": "15", "start_pos": 54916038, "end_pos": 54929762, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000038085", "url": "https://www.ensembl.org/id/ENSSSCG00000038085" } ] } } ], "crossref": [ { "id": "A0A5G2Q7T8", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2Q7T8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000038085", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000038085", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100622960", "url": "https://www.ncbi.nlm.nih.gov/gene/100622960", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007262", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007262", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100622960", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622960", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ICARCAN", "url": "https://omabrowser.org/oma/group/ICARCAN/", "database": "OMA", "categories": [ "Protein 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"tr|A0A287AI52-1|A0A5G2Q7T8_PIG Computationally mapped isoform of Leptin receptor overlapping transcript-like 1 OS=Sus scrofa OX=9823 GN=LEPROTL1 PE=3 SV=3 CANONICAL=A0A5G2Q7T8-1" }, "locus": { "chromosome": "15", "start_pos": 54924392, "end_pos": 54920983, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047780.3", "url": "https://www.ensembl.org/id/ENSSSCT00000047780.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043560.3", "url": "https://www.ensembl.org/id/ENSSSCP00000043560.3" } ] } }, { "isoform_ac": "A0A5G2Q7T8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7T8/entry", "sequence": { "sequence": "MAGIKALISLSFGGAIGLMFLMLGCALPIYNQYWPLFVLFFYILSPIPYCIARRLVDDTDAMSNACKELAIFLTTGIVVSAFGLPIVFARAHLIEWGACALVLTGNTVIFATILGFFLVFGSNDDFSWQQW", "length": 131, "header": "tr|A0A5G2Q7T8-1|A0A5G2Q7T8_PIG Isoform 1 of Leptin receptor overlapping transcript-like 1 OS=Sus scrofa OX=9823 GN=LEPROTL1 PE=3 SV=1 CANONICAL=A0A5G2Q7T8-1" }, "locus": { "chromosome": "15", "start_pos": 54929660, "end_pos": 54920983, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083344.1", "url": "https://www.ensembl.org/id/ENSSSCT00000083344.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059900.1", "url": "https://www.ensembl.org/id/ENSSSCP00000059900.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287AI52", "url": "https://www.uniprot.org/uniprotkb/A0A287AI52" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100622960", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622960", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A140T8I0-1", "protein_name": "Leptin receptor overlapping transcript-like 1", "gene_name": "LEPROTL1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAGIKALISLSFGGAVGLMFLMLGCALPQYNQYWPLFVLFFYILSPIPYCIARRLVDDTDATSNACKELAVFLTTGIVVSAFGLPIVFARAELIYWGACALVLTGNTVIFATILGFFLVFGSNDDFSWQQW", "length": 131 }, "evidence": [ { "id": "A0A5G2Q7T8", "url": "https://omabrowser.org/oma/group/A0A5G2Q7T8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3H618-1", "protein_name": "Leptin receptor overlapping transcript-like 1", "gene_name": "Leprotl1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAGIKALISLSFGGAIGLMFLMLGCALPIYNQYWPLFVLFFYILSPIPYCIARRLVDDTDAMSNACKELAIFLTTGIVVSAFGLPVVFARAHLIEWGACALVLTGNTVIFATILGFFLVFGSNDDFSWQQW", "length": 131 }, "evidence": [ { "id": "A0A5G2Q7T8", "url": "https://omabrowser.org/oma/group/A0A5G2Q7T8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "O95214-1", "protein_name": "Leptin receptor overlapping transcript-like 1", "gene_name": "LEPROTL1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAGIKALISLSFGGAIGLMFLMLGCALPIYNKYWPLFVLFFYILSPIPYCIARRLVDDTDAMSNACKELAIFLTTGIVVSAFGLPIVFARAHLIEWGACALVLTGNTVIFATILGFFLVFGSNDDFSWQQW", "length": 131 }, "evidence": [ { "id": "A0A5G2Q7T8", "url": "https://omabrowser.org/oma/group/A0A5G2Q7T8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P47111-1", "protein_name": "Vacuolar protein sorting-associated protein 55", "gene_name": "VPS55", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MMEFKVSPLTKIISLSGFLALGFLLVILSCALFHNYYPLFDILIFLLAPIPNTIFNAGNKYHTSDFMSDSSNTGQDLAHFLTGMLVTSGIALPVVFYHCQLIGHLSCIMCMIGGLIIYSSIVIFKWFFKKDFNEDDSLFG", "length": 140 }, "evidence": [ { "id": "A0A5G2Q7T8", "url": "https://omabrowser.org/oma/group/A0A5G2Q7T8/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q32PD8-1", "protein_name": "Leptin receptor overlapping transcript-like 1", "gene_name": "LEPROTL1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAGIKALISLSFGGAIGLMFLMLGCALPIYNQYWPLFVLFFYILSPIPYCIARRLVDDTDAMSNACKELAIFLTTGIVVSAFGLPIVFARANLIEWGACALVLTGNTVIFATILGFFLVFGSNDDFSWQQW", "length": 131 }, "evidence": [ { "id": "A0A5G2Q7T8", "url": 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"MAGIKALISLSFGGAIGLMFLMLGCALPIYNQYWPLFVLFFYILSPIPYCIARRLVDDTDAMSNACKELAIFLTTGVVVSAFGLPVVFARAHLIEWGACALVLTGNTVIFATILGFFLVFGSNDDFSWQQW", "length": 131 }, "evidence": [ { "id": "A0A5G2Q7T8", "url": "https://omabrowser.org/oma/group/A0A5G2Q7T8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8MMD0-1", "protein_name": "Leptin receptor gene-related protein", "gene_name": "BcDNA:RH04491", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MATLKALFICAFLTCIGVTFLILACAVPTTKIFYPFFVLLFYVLSVLPVFIARRTTPGNETNPKSEFAHFLTAGMVLSAFALPIVLAHALVITWTASILTIISNIINYGTIFWYAMRDDEPYGSMF", "length": 126 }, "evidence": [ { "id": "A0A5G2Q7T8", "url": "https://omabrowser.org/oma/group/A0A5G2Q7T8/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9AST6-1", "protein_name": "Vacuolar protein sorting-associated protein 55 homolog", "gene_name": "", "tax_id": 3702, "organism": 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"database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAL2/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. 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"categories": [ "Protein Classification" ] }, { "id": "IPR001997", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001997", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003096", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003096", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036872", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036872", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050606", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050606", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "DYPLEYQ", "url": "https://omabrowser.org/oma/group/DYPLEYQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR47385", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47385", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47385:SF17", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47385:SF17", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00307", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00307", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00402", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00402", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287AUX6", "url": "https://www.uniprot.org/uniprotkb/A0A287AUX6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AUX6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AUX6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QAL2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAL2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QAL2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAL2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RI25", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RI25", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RI25-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RI25-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S543", "url": "https://www.uniprot.org/uniprotkb/F1S543", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S543-1", "url": "https://www.uniprot.org/uniprotkb/F1S543-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTHFNKGPSYGLSAEVKNKIASKYDHQAEEDLRNWIEVTGMSIGTSFQLGLKDGIILCELINKLQPGSVKKVNESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNMTQVQTTLVALAGLAKTKGFHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCASQAGMTAYGTRRHLYDPKMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKLTLQPVDNSTISLQMGTNKVASQKGMSVYGLGRQVYDPKYCAAPTEPVIHNGSQGTGTNGSEISDSDYQAEYPDEYHGEYPDDYPRDYQYGDQGIDY", "length": 328, "header": "tr|A0A5G2QAL2-1|A0A5G2QAL2_PIG Isoform 1 of Calponin OS=Sus scrofa OX=9823 GN=CNN3 PE=1 SV=1 CANONICAL=A0A5G2QAL2-1" }, "isoforms": [ { "isoform_ac": "A0A287AUX6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AUX6/entry", "sequence": { "sequence": "MSIGTSFQLGLKDGIILCELINKLQPGSVKKVNESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNMTQVQTTLVALAGLAKTKGFHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCASQAGMTAYGTRRHLYDPKMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKLTLQPVDNSTISLQMGTNKVASQKGMSVYGLGRQSAIAIIRQSTPMSIMASTRMTTPEIINTATRALIIRFTGELSV", "length": 268, "header": "tr|A0A287AUX6-1|A0A5G2QAL2_PIG Computationally mapped isoform of Calponin OS=Sus scrofa OX=9823 GN=CNN3 PE=1 SV=1 CANONICAL=A0A5G2QAL2-1" }, "locus": { "chromosome": "4", "start_pos": 122527578, "end_pos": 122521630, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038549.2", "url": "https://www.ensembl.org/id/ENSSSCT00000038549.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047663.2", "url": "https://www.ensembl.org/id/ENSSSCP00000047663.2" } ] } }, { "isoform_ac": "A0A5G2QAL2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAL2/entry", "sequence": { "sequence": "MTHFNKGPSYGLSAEVKNKIASKYDHQAEEDLRNWIEVTGMSIGTSFQLGLKDGIILCELINKLQPGSVKKVNESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNMTQVQTTLVALAGLAKTKGFHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCASQAGMTAYGTRRHLYDPKMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKLTLQPVDNSTISLQMGTNKVASQKGMSVYGLGRQVYDPKYCAAPTEPVIHNGSQGTGTNGSEISDSDYQAEYPDEYHGEYPDDYPRDYQYGDQGIDY", "length": 328, "header": "tr|A0A5G2QAL2-1|A0A5G2QAL2_PIG Isoform 1 of Calponin OS=Sus scrofa OX=9823 GN=CNN3 PE=1 SV=1 CANONICAL=A0A5G2QAL2-1" }, "locus": { "chromosome": "4", "start_pos": 122527553, "end_pos": 122504665, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089458.1", "url": "https://www.ensembl.org/id/ENSSSCT00000089458.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060424.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060424.1" } ] } }, { "isoform_ac": "A0A5G2RI25-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RI25/entry", "sequence": { "sequence": "MTHFNKGPSYGLSAEVKNKIASKYDHQAEEDLRNWIEVTGMSIGTSFQLGLKDGIILCELINKLQPGSVKKVNESSLNWPQAKTKGFHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCASQAGMTAYGTRRHLYDPKMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKLTLQPVDNSTISLQMGTNKVASQKGMSVYGLGRQVYDPKYCAAPTEPVIHNGSQGTGTNGSEISDSDYQAEYPDEYHGEYPDDYPRDYQYGDQGIDY", "length": 282, "header": "tr|A0A5G2RI25-1|A0A5G2QAL2_PIG Computationally mapped isoform of Calponin OS=Sus scrofa OX=9823 GN=CNN3 PE=1 SV=1 CANONICAL=A0A5G2QAL2-1" }, "locus": { "chromosome": "4", "start_pos": 122527553, "end_pos": 122504665, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082159.1", "url": "https://www.ensembl.org/id/ENSSSCT00000082159.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071127.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071127.1" } ] } }, { "isoform_ac": "F1S543-1", "url": "https://www.uniprot.org/uniprotkb/F1S543/entry", "sequence": { "sequence": "MSIGTSFQLGLKDGIILCELINKLQPGSVKKVNESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNMTQVQTTLVALAGLAKTKGFHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCASQAGMTAYGTRRHLYDPKMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKLTLQPVDNSTISLQMGTNKVASQKGMSVYGLGRQVYDPKYCAAPTEPVIHNGSQGTGTNGSEISDSDYQAEYPDEYHGEYPDDYPRDYQYGDQGIDY", "length": 288, "header": "tr|F1S543-1|A0A5G2QAL2_PIG Computationally mapped isoform of Calponin OS=Sus scrofa OX=9823 GN=CNN3 PE=1 SV=2 CANONICAL=A0A5G2QAL2-1" }, "locus": { "chromosome": "4", "start_pos": 122527553, "end_pos": 122521630, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007541.4", "url": "https://www.ensembl.org/id/ENSSSCT00000007541.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007341.3", "url": "https://www.ensembl.org/id/ENSSSCP00000007341.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287AUX6", "url": "https://www.uniprot.org/uniprotkb/A0A287AUX6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "actin binding", "id": "GO:0003779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003779", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAL2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAL2" } ], "pmid": "" }, { "name": "calmodulin binding", "id": "GO:0005516", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005516", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAL2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAL2" } ], "pmid": "" }, { "name": "actin filament binding", "id": "GO:0051015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051015", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAL2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAL2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "actomyosin structure organization", "id": "GO:0031032", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031032", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAL2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAL2" } ], "pmid": "" }, { "name": 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"https://www.uniprot.org/uniprotkb/A0A5G2QAL2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 113, "end_pos": 115, "annotation": "n_glycosylation_sequon" }, { "start_pos": 239, "end_pos": 241, "annotation": "n_glycosylation_sequon" }, { "start_pos": 282, "end_pos": 284, "annotation": "n_glycosylation_sequon" }, { "start_pos": 290, "end_pos": 292, "annotation": "n_glycosylation_sequon" }, { "start_pos": 73, "end_pos": 75, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QAL2-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 328, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QAL2-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QAL2" } ], "lectin_list": [], 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"sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2Q9N0-1", "uniprot_ac": "A0A5G2Q9N0", "uniprot_id": "A0A5G2Q9N0_PIG", "mass": { "chemical_mass": 90691.0, "monoisotopic_mass": 90691.0 }, "refseq": {}, "gene_names": [ { "name": "DPP6", "type": "recommended", "evidence": [ { "id": "A0A5G2Q9N0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9N0" } ] } ], "protein_names": [ { "name": "A-type potassium channel modulatory protein DPP6", "type": "recommended", "evidence": [ { "id": "A0A5G2Q9N0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9N0/entry#names_and_taxonomy" } ] }, { "name": "Dipeptidyl aminopeptidase-like protein 6", "type": "synonym", "evidence": [ { "id": "A0A5G2Q9N0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9N0/entry#names_and_taxonomy" } ] }, { "name": "Dipeptidyl peptidase 6", "type": "synonym", 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"categories": [ "Protein" ] }, { "id": "A0A287AZT3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AZT3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B3V6", "url": "https://www.uniprot.org/uniprotkb/A0A287B3V6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B3V6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B3V6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q9N0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9N0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q9N0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9N0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QMH6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMH6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QMH6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMH6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QWW3", 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"MTTAKEPNASGKSVQQQEQELVGSNPPQRNWKGIAIALLVILVICSLIVTSVILLTPAEDNSLSQKKKVTVEDLFSEDFKIHDPEAKWISDKEFIYREQKGSVILRNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAELQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKSYVAHWWSPDGTRLAYATINDSRVPVMELPTYTGSIYPAVKPYHYPKAGCENPSISLHVIGLNGPTHDLEMMPPVDPRMREYYITMVKWATSTKVAVNWLSRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPLFSKDGRTFFFVRAIPQGGQGKFYHITVSSSQPNSSNDNIQSITSGDWDVTTILAYDEKRSKIYFLSTEDMPRRRQLYSASTVGNFNRQCLSCDLVENCSYFSASFSPGADFFLLKCEGPGVPTVTVHNTTDRKKMFDLETNEHVQKAVNDRQMPKVEYRKIEIDDYHLPVQILKPATFTDTAHYPLLLVVDGTPGSQSVAEKFEVTWETVMVSSHGAVVVKCDGRGSGFQGTKLLHVRRKLGLLEEKDQVEAVRMMLKEQYIDKTRVAVFGKDYGGYLSTYILPAKGENQGQIFSCGCALSPITDFKLYASAFSERYLGLHGLDNRAYEMARVAPRVSALEGQQLLIIHATADEKIHFQHTAELITQLIKGKANYSLQIYPDESHYFNSASLQHHLYRSLTNFFVECFRIQDKLPTVTAKEDEEED", "length": 802, "header": "tr|A0A5G2Q9N0-1|A0A5G2Q9N0_PIG Isoform 1 of A-type potassium channel modulatory protein DPP6 OS=Sus scrofa OX=9823 GN=DPP6 PE=1 SV=1 CANONICAL=A0A5G2Q9N0-1" }, "isoforms": [ { "isoform_ac": "A0A287AXP5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AXP5/entry", "sequence": { "sequence": "MPQSPCAVKPSPLGGEELVGSNPPQRNWKGIAIALLVILVICSLIVTSVILLTPAEDNSLSQKKKVTVEDLFSEDFKIHDPEAKWISDKEFIYREQKGSVILRNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAELQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKSYVAHWWSPDGTRLAYATINDSRVPVMELPTYTGSIYPAVKPYHYPKAGCENPSISLHVIGLNGPTHDLEMMPPVDPRMREYYITMVKWATSTKVAVNWLSRAQNVSILTLCDATTGVCTKHDRDLTGGFCPQNEEPLFSKDGRTFFFVRAIPQGGQGKFYHITVSSSQPNSSNDNIQSITSGDWDVTTILAYDEKRSKIASTVGNFNRQCLSCDLVENCSYFSASFSPGADFFLLKCEGPGVPTVTVHNTTDRKKMFDLETNEHVQKAVNDRQMPKVEYRKIEIDDYHLPVQILKPATFTDTAHYPLLLVVDGTPGSQSVAEKFEVTWETVMVSSHGAVVVKCDGRGSGFQGTKLLHESDGSWACRLPERVPDLLTRLSAALAQDYGGYLSTYILPAKGENQGQIFSCGCALSPITDFKLYASAFSERYLGLHGLDNRAYEMARVAPRVSALEGQQLLIIHATADEKIHFQHTAELITQLIKGKANYSLQIYPDESHYFNSASLQHHLYRSLTNFFVECFRIQDKLPTVTAKEDEEED", "length": 773, "header": "tr|A0A287AXP5-1|A0A5G2Q9N0_PIG Computationally mapped isoform of A-type potassium channel modulatory protein DPP6 OS=Sus scrofa OX=9823 GN=DPP6 PE=1 SV=2 CANONICAL=A0A5G2Q9N0-1" }, "locus": { "chromosome": "18", "start_pos": 3517716, "end_pos": 3149335, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059068.3", "url": "https://www.ensembl.org/id/ENSSSCT00000059068.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000048922.2", "url": "https://www.ensembl.org/id/ENSSSCP00000048922.2" } ] } }, { "isoform_ac": "A0A287AZT3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AZT3/entry", "sequence": { "sequence": "SQGLSSMCADGEKGETSFPGPTPMTSCNPITSQRLCELVGSNPPQRNWKGIAIALLVILVICSLIVTSVILLTPAEDNSLSQKKKVTVEDLFSEDFKIHDPEAKWISDKEFIYREQKGSVILRNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAELQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKSYVAHWWSPDGTRLAYATINDSRVPVMELPTYTGSIYPAVKPYHYPKAGCENPSISLHVIGLNGPTHDLEMMPPVDPRMREYYITMVKWATSTKVAVNWLSRAQNVSILTLCDATTGVCTKHDRDLTGGFCPQNEEPLFSKDGRTFFFVRAIPQGGQGKFYHITVSSSQPNSSNDNIQSITSGDWDVTTILAYDEKRSKIYFLSTEDMPRRRQLYSASTVGNFNRQCLSCDLVENCSYFSASFSPGADFFLLKCEGPGVPTVTVHNTTDRKKMFDLETNEHVQKAVNDRQMPKVEYRKIEIDDYHLPVQILKPATFTDTAHYPLLLVVDGTPGSQSVAEKFEVTWETVMVSSHGAVVVKCDGRGSGFQGTKLLRRKLGLLEEKDQVEAVRMMLKEQYIDKTRVAVFGKDYGGYLSTYILPAKGENQGQIFSCGCALSPITDFKLYASAFSERYLGLHGLDNRAYEMARVAPRVSALEGQQLLIIHATADEKIHFQHTAELITQLIKGKANYSLQIYPDESHYFNSASLQHHLYRSLTNFFVECFRIQDKLPTVTAKEDEEED", "length": 816, "header": "tr|A0A287AZT3-1|A0A5G2Q9N0_PIG Computationally mapped isoform of A-type potassium channel modulatory protein DPP6 OS=Sus scrofa OX=9823 GN=DPP6 PE=1 SV=2 CANONICAL=A0A5G2Q9N0-1" }, "locus": { "chromosome": "18", "start_pos": 3521523, "end_pos": 3149335, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063773.3", "url": "https://www.ensembl.org/id/ENSSSCT00000063773.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049680.2", "url": "https://www.ensembl.org/id/ENSSSCP00000049680.2" } ] } }, { "isoform_ac": "A0A287B3V6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B3V6/entry", "sequence": { "sequence": "MKEKAMIKTAKMQGNVMELVGSNPPQRNWKGIAIALLVILVICSLIVTSVILLTPAEDNSLSQKKKVTVEDLFSEDFKIHDPEAKWISDKEFIYREQKGSVILRNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAELQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKSYVAHWWSPDGTRLAYATINDSRVPVMELPTYTGSIYPAVKPYHYPKAGCENPSISLHVIGLNGPTHDLEMMPPVDPRMREYYITMVKWATSTKVAVNWLSRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPLFSKDGRTFFFVRAIPQGGQGKFYHITVSSSQPNSSNDNIQSITSGDWDVTTILAYDEKRSKIYFLSTEDMPRRRQLYSASTVGNFNRQCLSCDLVENCSYFSASFSPGADFFLLKCEGPGVPTVTVHNTTDRKKMFDLETNEHVQKAVNDRQMPKVEYRKIEIDDYHLPVQILKPATFTDTAHYPLLLVVDGTPGSQSVAEKFEVTWETVMVSSHGAVVVKCDGRGSGFQGTKLLHVRRKLGLLEEKDQVEAVRMMLKEQYIDKTRVAVFGKDYGGYLSTYILPAKGENQGQIFSCGCALSPITDFKLYASAFSERYLGLHGLDNRAYEMARVAPRVSALEGQQLLIIHATADEKIHFQHTAELITQLIKGKANYSLQIYPDESHYFNSASLQHHLYRSLTNFFVECFRIQDKLPTVTAKEDEEED", "length": 800, "header": "tr|A0A287B3V6-1|A0A5G2Q9N0_PIG Computationally mapped isoform of A-type potassium channel modulatory protein DPP6 OS=Sus scrofa OX=9823 GN=DPP6 PE=1 SV=2 CANONICAL=A0A5G2Q9N0-1" }, "locus": { "chromosome": "18", "start_pos": 4053919, "end_pos": 3149335, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054737.3", "url": "https://www.ensembl.org/id/ENSSSCT00000054737.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050805.2", "url": "https://www.ensembl.org/id/ENSSSCP00000050805.2" } ] } }, { "isoform_ac": "A0A5G2Q9N0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9N0/entry", "sequence": { "sequence": "MTTAKEPNASGKSVQQQEQELVGSNPPQRNWKGIAIALLVILVICSLIVTSVILLTPAEDNSLSQKKKVTVEDLFSEDFKIHDPEAKWISDKEFIYREQKGSVILRNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAELQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKSYVAHWWSPDGTRLAYATINDSRVPVMELPTYTGSIYPAVKPYHYPKAGCENPSISLHVIGLNGPTHDLEMMPPVDPRMREYYITMVKWATSTKVAVNWLSRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPLFSKDGRTFFFVRAIPQGGQGKFYHITVSSSQPNSSNDNIQSITSGDWDVTTILAYDEKRSKIYFLSTEDMPRRRQLYSASTVGNFNRQCLSCDLVENCSYFSASFSPGADFFLLKCEGPGVPTVTVHNTTDRKKMFDLETNEHVQKAVNDRQMPKVEYRKIEIDDYHLPVQILKPATFTDTAHYPLLLVVDGTPGSQSVAEKFEVTWETVMVSSHGAVVVKCDGRGSGFQGTKLLHVRRKLGLLEEKDQVEAVRMMLKEQYIDKTRVAVFGKDYGGYLSTYILPAKGENQGQIFSCGCALSPITDFKLYASAFSERYLGLHGLDNRAYEMARVAPRVSALEGQQLLIIHATADEKIHFQHTAELITQLIKGKANYSLQIYPDESHYFNSASLQHHLYRSLTNFFVECFRIQDKLPTVTAKEDEEED", "length": 802, "header": "tr|A0A5G2Q9N0-1|A0A5G2Q9N0_PIG Isoform 1 of A-type potassium channel modulatory protein DPP6 OS=Sus scrofa OX=9823 GN=DPP6 PE=1 SV=1 CANONICAL=A0A5G2Q9N0-1" }, "locus": { "chromosome": "18", "start_pos": 3646794, "end_pos": 3149335, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071756.2", "url": "https://www.ensembl.org/id/ENSSSCT00000071756.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060023.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060023.1" } ] } }, { "isoform_ac": "A0A5G2QMH6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMH6/entry", "sequence": { "sequence": "FPSPTPARKQTGLPGGELVGSNPPQRNWKGIAIALLVILVICSLIVTSVILLTPAEDNSLSQKKKVTVEDLFSEDFKIHDPEAKWISDKEFIYREQKGSVILRNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAELQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKSYVAHWWSPDGTRLAYATINDSRVPVMELPTYTGSIYPAVKPYHYPKAGCENPSISLHVIGLNGPTHDLEMMPPVDPRMREYYITMVKWATSTKVAVNWLSRAQNVSILTLCDATTGVCTKHDRDLTGGFCPQNEEPLFSKDGRTFFFVRAIPQGGQGKFYHITVSSSQPNSSNDNIQSITSGDWDVTTILAYDEKRSKIASTVGNFNRQCLSCDLVENCSYFSASFSPGADFFLLKCEGEFPPPPAARLVLNRQMFDLETNEHVQKAVNDRQMPKVEYRKIEIDDYHLPVQILKPATFTDTAHYPLLLVVDGTPGSQSVAEKFEVTWETVMVSSHGAVVVKCDGRGSGFQGTKLLHESDGSWACRLPERVPDLLTRLSAALAQDYGGYLSTYILPAKGENQGQIFSCGCALSPITDFKLYASAFSERYLGLHGLDNRAYEMARVAPRVSALEGQQLLIIHATADEKIHFQHTAELITQLIKGKANYSLQIYPDESHYFNSASLQHHLYRSLTNFFVECFRIQDKLPTVTAKEDEEED", "length": 772, "header": "tr|A0A5G2QMH6-1|A0A5G2QMH6_PIG Computationally mapped isoform of A-type potassium channel modulatory protein DPP6 OS=Sus scrofa OX=9823 GN=DPP6 PE=3 SV=1 CANONICAL=A0A5G2Q9N0-1" }, "locus": { "chromosome": "18", "start_pos": 3518097, "end_pos": 3149335, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080508.2", "url": "https://www.ensembl.org/id/ENSSSCT00000080508.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065839.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065839.1" } ] } }, { "isoform_ac": "A0A5G2QWW3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWW3/entry", "sequence": { "sequence": "MQIPSQPNTCSKADRELVGSNPPQRNWKGIAIALLVILVICSLIVTSVILLTPAEDNSLSQKKKVTVEDLFSEDFKIHDPEAKWISDKEFIYREQKGSVILRNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKSYVAHWWSPDGTRLAYATINDSRVPVMELPTYTGSIYPAVKPYHYPKAGCENPSISLHVIGLNGPTHDLEMMPPVDPRMREYYITMVKWATSTKVAVNWLSRAQNVSILTLCDATTGVCTKHDRDLTGGFCPQNEEPLFSKDGRTFFFVRAIPQGGQGKFYHITVSSSQPNSSNDNIQSITSGDWDVTTILAYDEKRSKIASTVGNFNRQCLSCDLVENCSYFSASFSPGADFFLLKCEGPGVPTVTVHNTTDRKKMFDLETNEHVQKAVNDRQMPKVEYRKIEIDDYHLPVQILKPATFTDTAHYPLLLVVDGTPGSQSVAEKFEVTWETVMVSSHGAVVVKCDGRGSGFQGTKLLHESDGSWACRLPERVPDLLTRLSAALAQDYGGYLSTYILPAKGENQGQIFSCGCALSPITDFKVHPMARVAPRVSALEGQQLLIIHATADEKIHFQHTAELITQLIKGKANYSLQIYPDESHYFNSASLQHHLYRSLTNFFVECFRIQDKLPTVTAKEDEEED", "length": 708, "header": "tr|A0A5G2QWW3-1|A0A5G2Q9N0_PIG Computationally mapped isoform of A-type potassium channel modulatory protein DPP6 OS=Sus scrofa OX=9823 GN=DPP6 PE=1 SV=3 CANONICAL=A0A5G2Q9N0-1" }, "locus": { "chromosome": "18", "start_pos": 3518056, "end_pos": 3149335, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000086033.2", "url": "https://www.ensembl.org/id/ENSSSCT00000086033.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068635.2", "url": "https://www.ensembl.org/id/ENSSSCP00000068635.2" } ] } }, { "isoform_ac": "A0A5G2R3R5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3R5/entry", "sequence": { "sequence": "MTTAKEPNASGKSVQQQEQELVGSNPPQRNWKGIAIALLVILVICSLIVTSVILLTPAEDNSLSQKKKVTVEDLFSEDFKIHDPEAKWISDKEFIYREQKGSVILRNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKSYVAHWWSPDGTRLAYATINDSRVPVMELPTYTGSIYPAVKPYHYPKAGCENPSISLHVIGLNGPTHDLEMMPPVDPRMREYYITMVKWATSTKVAVNWLSRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPLFSKDGRTFFFVRAIPQGGQGKFYHITVSSSQPNSSNDNIQSITSGDWDVTTILAYDEKRSKIYFLSTEDMPRRRQLYSASTVGNFNRQCLSCDLVENCSYFSASFSPGADFFLLKCEGPGVPTVTVHNTTDRKKMFDLETNEHVQKAVNDRQMPKVEYRKIEIDDYHLPVQILKPATFTDTAHYPLLLVVDGTPGSQSVAEKFEVTWETVMVSSHGAVVVKCDGRGSGFQGTKLLHVRRKLGLLEEKDQVEAVRMMLKEQYIDKTRVAVFGKDYGGYLSTYILPAKGENQGQIFSCGCALSPITDFKLYASAFSERYLGLHGLDNRAYEMARVAPRVSALEGQQLLIIHATADEKIHFQHTAELITQLIKGKANYSLQIYPDESHYFNSASLQHHLYRSLTNFFVECFRIQDKLPTVTAKEDEEED", "length": 757, "header": "tr|A0A5G2R3R5-1|A0A5G2Q9N0_PIG Computationally mapped isoform of A-type potassium channel modulatory protein DPP6 OS=Sus scrofa OX=9823 GN=DPP6 PE=1 SV=1 CANONICAL=A0A5G2Q9N0-1" }, "locus": { "chromosome": "18", "start_pos": 3646794, "end_pos": 3149335, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076228.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076228.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068837.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068837.1" } ] } }, { "isoform_ac": "A0A5G2R7I6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7I6/entry", "sequence": { "sequence": "MASLYQRFTGKINTSRSFPAPPEASRLLGGQGPEEDGAGPKPLGAQAPAAGPRERGGGGGGAGGRPRFQYQARSDCDDEDELVGSNPPQRNWKGIAIALLVILVICSLIVTSVILLTPAEDNSLSQKKKVTVEDLFSEDFKIHDPEAKWISDKEFIYREQKGSVILRNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAELQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKSYVAHWWSPDGTRLAYATINDSRVPVMELPTYTGSIYPAVKPYHYPKAGCENPSISLHVIGLNGPTHDLEMMPPVDPRMREYYITMVKWATSTKVAVNWLSRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPLFSKDGRTFFFVRAIPQGGQGKFYHITVSSSQPNSSNDNIQSITSGDWDVTTILAYDEKRSKIYFLSTEDMPRRRQLYSASTVGNFNRQCLSCDLVENCSYFSASFSPGADFFLLKCEGPGVPTVTVHNTTDRKKMFDLETNEHVQKAVNDRQMPKVEYRKIEIDDYHLPVQILKPATFTDTAHYPLLLVVDGTPGSQSVAEKFEVTWETVMVSSHGAVVVKCDGRGSGFQGTKLLHVRRKLGLLEEKDQVEAVRMMLKEQYIDKTRVAVFGKDYGGYLSTYILPAKGENQGQIFSCGCALSPITDFKLYASAFSERYLGLHGLDNRAYEMARVAPRVSALEGQQLLIIHATADEKIHFQHTAELITQLIKGKANYSLQIYPDESHYFNSASLQHHLYRSLTNFFVECFRIQDKLPTVTAKEDEEED", "length": 863, "header": "tr|A0A5G2R7I6-1|A0A5G2Q9N0_PIG Computationally mapped isoform of A-type potassium channel modulatory protein DPP6 OS=Sus scrofa OX=9823 GN=DPP6 PE=1 SV=1 CANONICAL=A0A5G2Q9N0-1" }, "locus": { "chromosome": "18", "start_pos": 3905410, "end_pos": 3149335, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084222.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084222.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073207.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073207.1" } ] } }, { "isoform_ac": "A0A8W4FH72-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FH72/entry", "sequence": { "sequence": "LLASSPGFKQLLKFSFFLFQRPFNPIPYSWRVLLPHHKAFFPTILLCFIFPSRDPQSLDPPEVSNAELQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKSYVAHWWSPDGTRLAYATINDSRVPVMELPTYTGSIYPAVKPYHYPKAGCENPSISLHVIGLNGPTHDLEMMPPVDPRMREYYITMVKWATSTKVAVNWLSRAQNVSILTLCDATTGVCTKHDRDLTGGFCPQNEEPLFSKDGRTFFFVRAIPQGGQGKFYHITVSSSQPNSSNDNIQSITSGDWDVTTILAYDEKRSKIASTVGNFNRQCLSCDLVENCSYFSASFSPGADFFLLKCEGPGVPTVTVHNTTDRKKMFDLETNEHVQKAVNDRQMPKVEYRKIEIDDYHLPVQILKPATFTDTAHYPLLLVVDGTPGSQSVAEKFEVTWETVMVSSHGAVVVKCDGRGSGFQGTKLLHESDGSWACRLPERVPDLLTRLSAALAQDYGGYLSTYILPAKGENQGQIFSCGCALSPITDFKLYASAFSERYLGLHGLDNRAYEMARVAPRVSALEGQQLLIIHATADEKIHFQHTAELITQLIKGKANYSLQIYPDESHYFNSASLQHHLYRSLTNFFVECFRIQDKLPTVTAKEDEEED", "length": 664, "header": "tr|A0A8W4FH72-1|A0A5G2Q9N0_PIG Computationally mapped isoform of A-type potassium channel modulatory protein DPP6 OS=Sus scrofa OX=9823 GN=DPP6 PE=1 SV=1 CANONICAL=A0A5G2Q9N0-1" }, "locus": { "chromosome": "18", "start_pos": 3318976, "end_pos": 3149335, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000104379.1", "url": "https://www.ensembl.org/id/ENSSSCT00000104379.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078587.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078587.1" } ] } }, { "isoform_ac": "F1SSP9-1", "url": "https://www.uniprot.org/uniprotkb/F1SSP9/entry", "sequence": { "sequence": "ARKKHKEDAKWFSFKVFLFKRRLRHVTFPLVPYSWRVLLPHHKAFFPTILLCFIFPSRDPQSLDPPEVSNAELQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKSYVAHWWSPDGTRLAYATINDSRVPVMELPTYTGSIYPAVKPYHYPKAGCENPSISLHVIGLNGPTHDLEMMPPVDPRMREYYITMVKWATSTKVAVNWLSRAQNVSILTLCDATTGVCTKHDRDLTGGFCPQNEEPLFSKDGRTFFFVRAIPQGGQGKFYHITVSSSQPNSSNDNIQSITSGDWDVTTILAYDEKRSKIYFLSTEDMPRRRQLYSASTVGNFNRQCLSCDLVENCSYFSASFSPGADFFLLKCEGPGVPTVTVHNTTDRKKMFDLETNEHVQKAVNDRQMPKVEYRKIEIDDYHLPVQILKPATFTDTAHYPLLLVVDGTPGSQSVAEKFEVTWETVMVSSHGAVVVKCDGRGSGFQGTKLLRKLGLLEEKDQVEAVRMMLKEQYIDKTRVAVFGKDYGGYLSTYILPAKGENQGQIFSCGCALSPITDFKLYASAFSERYLGLHGLDNRAYEMARVAPRVSALEGQQLLIIHATADEKIHFQHTAELITQLIKGKANYSLQIYPDESHYFNSASLQHHLYRSLTNFFVECFRIQDKLPTVTAKEDEEED", "length": 691, "header": "tr|F1SSP9-1|A0A5G2Q9N0_PIG Computationally mapped isoform of A-type potassium channel modulatory protein DPP6 OS=Sus scrofa OX=9823 GN=DPP6 PE=1 SV=3 CANONICAL=A0A5G2Q9N0-1" }, "locus": { "chromosome": "18", "start_pos": 3319824, "end_pos": 3149335, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017884.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017884.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017403.3", "url": "https://www.ensembl.org/id/ENSSSCP00000017403.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SSP9", "url": "https://www.uniprot.org/uniprotkb/F1SSP9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9N0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9N0" } ], "pmid": "" }, { "name": "voltage-gated potassium channel complex", "id": "GO:0008076", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008076", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9N0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9N0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": 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"length": 1172, "header": "tr|F1S7C4-1|F1S7C4_PIG Computationally mapped isoform of Endoplasmic reticulum transmembrane helix translocase OS=Sus scrofa OX=9823 GN=ATP13A1 PE=1 SV=2 CANONICAL=A0A5G2Q8V3-1" }, "locus": { "chromosome": "2", "start_pos": 58285141, "end_pos": 58267738, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000015216.3", "url": "https://www.ensembl.org/id/ENSSSCT00000015216.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014810.3", "url": "https://www.ensembl.org/id/ENSSSCP00000014810.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B1K5", "url": "https://www.uniprot.org/uniprotkb/A0A287B1K5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-936837", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-936837", "resource": "Reactome", "description": "Ion transport by P-type ATPases" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 7, "go_terms": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8V3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8V3" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8V3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8V3" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8V3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8V3" } ], "pmid": "" }, { "name": "P-type transmembrane transporter activity", "id": "GO:0140358", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140358", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8V3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8V3" } ], "pmid": "" }, { "name": "ATPase-coupled monoatomic cation transmembrane transporter activity", "id": "GO:0019829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019829", 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"table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1W4K8-1", "uniprot_ac": "A0A4X1W4K8", "uniprot_id": "A0A4X1W4K8_PIG", "mass": { "chemical_mass": 48562.0, "monoisotopic_mass": 48562.0 }, "refseq": { "ac": "XP_020952400", "name": "nuclear autoantigenic sperm protein isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020952400" }, "gene_names": [ { "name": "NASP", "type": "recommended", "evidence": [ { "id": "A0A4X1W4K8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4K8" } ] }, { "name": "NASP", "type": "synonym", "evidence": [ { "id": "XP_020952400", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020952400" } ] } ], "protein_names": [ { "name": "Nuclear autoantigenic sperm protein", "type": "recommended", "evidence": [ { "id": "A0A4X1W4K8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4K8/entry#names_and_taxonomy" } ] }, { "name": "nuclear autoantigenic sperm protein isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020952400", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020952400" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W4K8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4K8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NASP", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4K8", "locus": { "chromosome": "6", "start_pos": 165770055, "end_pos": 165805383, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000029573", "url": "https://www.ensembl.org/id/ENSSSCG00000029573" } ] } } ], "crossref": [ { "id": "A0A4X1W4K8", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1W4K8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000029573", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000029573", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100622547", "url": "https://www.ncbi.nlm.nih.gov/gene/100622547", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR011990", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011990", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019544", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019544", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019734", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019734", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051730", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051730", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100622547", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622547", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QIKWRXL", "url": "https://omabrowser.org/oma/group/QIKWRXL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LRP1", "url": "https://www.orthodb.org/?gene=I3LRP1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15081", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15081", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15081:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15081:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF10516", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10516", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13181", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13181", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020952400", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020952400", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B7J5", "url": "https://www.uniprot.org/uniprotkb/A0A287B7J5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B7J5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7J5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BCS0", "url": "https://www.uniprot.org/uniprotkb/A0A287BCS0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BCS0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCS0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W4K8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4K8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W4K8-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4K8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJ28", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ28", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJ28-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ28-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QNZ4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNZ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QNZ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNZ4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QTR8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QTR8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QTR8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QTR8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QWX4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWX4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QWX4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWX4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R3S8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3S8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R3S8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3S8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FH39", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FH39", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FH39-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FH39-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LRP1", "url": "https://www.uniprot.org/uniprotkb/I3LRP1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LRP1-1", "url": "https://www.uniprot.org/uniprotkb/I3LRP1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAESTATAAITTELVSADKIEEDAPAPSTSADKVESLDVDSEAKKLLGLGQKHLVMGDIPAAVNAFQEAASLLGKKYGETANECGEAFFFYGKSLLELARMENGVLGNALEGVHVEEEEGEKTEESSLVENNDNIDETEGSEEEDKENDKAEEIPSDSVLENKSLQENEEEEIGNLELAWDMLDLAKIIFKRQDTKEAQLYAAQAHLKLGEVSVESENYVQAVEEFQACLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVTQFSKSIEVIEKRMAVLNEQMKEAEGSPAEYEKEIEELKELLPEIKEKIEDAKESQRSGNVAELALKATLVESSTSGFTPSGGGSSVAMIASRKPADGASSSNCVTDISHLVRKKRKPEEESPRKDDAKKAKQEPEVNGGSGDAVSSGTEVSENMEAENQAESRAAVEGTVEAGATVESTAC", "length": 448, "header": "tr|A0A4X1W4K8-1|A0A4X1W4K8_PIG Isoform 1 of Nuclear autoantigenic sperm protein OS=Sus scrofa OX=9823 GN=NASP PE=1 SV=1 CANONICAL=A0A4X1W4K8-1" }, "isoforms": [ { "isoform_ac": "A0A287B7J5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7J5/entry", "sequence": { "sequence": "MAAESTATAAITTELVSADKIEEDAPAPSTSADKVESLDVDSEAKKLLGLGQKHLVMGDIPAAVNAFQEAASLLMENGVLGNALEGVHVEEEEGEKTEESSLVENNDNIDEEAREELREQVYDAMGEKEAKKTEDKSLVKLDMEDREQESEMQKSGREDMDISEPAEKLQDKVESTPDQFAETTEDVKGAAAEGLNEAEVTPARPEQEAPDAEEGKSFSGTDIQEEGREKGVSGEVIVSIEENPKEASEEQPVVTLEKQGAAVAIEAVKPVDLGGDEPKEQAAASENEPGKAGLEQLVGQELPPAEESPEVTTQAAEASAPEAGLEVSEEPGQEAPVLPKDGAVNGPSAAGDHTPTEPQTNAEAPPETPAGSGLEEKVGAEVVPSREETKPSVEEAEAAGVGVETEVAQGATEKSPEDKVKIAAYEETQDKEQMKEGEETEGSEEEDKENDKAEEIPSDSVLENKSLQENEEEEIGNLELAWDMLDLAKIIFKRQDTKEAQLYAAQAHLKLGEVSVESENYVQAVEEFQACLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVTQFSKSIEVIEKRMAVLNEQMKEAEGSPAEYEKEIEELKELLPEIKEKIEDAKESQRSGNVAELALKATLVESSTSGFTPSGGGSSVAMIASRKPADGASSSNCVTDISHLVRKKRKPEEESPRKDDAKKAKQEPEVNGGSGDAVSSGTEVSENMEVGS", "length": 726, "header": "tr|A0A287B7J5-1|A0A4X1W4K8_PIG Computationally mapped isoform of Nuclear autoantigenic sperm protein OS=Sus scrofa OX=9823 GN=NASP PE=1 SV=1 CANONICAL=A0A4X1W4K8-1" }, "locus": { "chromosome": "6", "start_pos": 165804827, "end_pos": 165775740, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060447.3", "url": "https://www.ensembl.org/id/ENSSSCT00000060447.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052077.1", "url": "https://www.ensembl.org/id/ENSSSCP00000052077.1" } ] } }, { "isoform_ac": "A0A287BCS0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCS0/entry", "sequence": { "sequence": "MAAESTATAAITTELVSADKIEEDAPAPSTSADKVESLDVDSEAKKLLGLGQKHLVMGDIPAAVNAFQEAASLLMENGVLGNALEGVHVEEEEGEKTEESSLVENNDNIDEEAREELREQVYDAMGEKEAKKTEDKSLVKLDMEDREQESEMQKSGREDMDISEPAEKLQDKVESTPDQFAETTEDVKGAAAEGLNEAEVTPARPEQEAPDAEEGKSFSGTDIQEEGREKGVSGEVIVSIEENPKEASEEQPVVTLEKQGAAVAIEAVKPVDLGGDEPKEQAAASENEPGKAGLEQLVGQELPPAEESPEVTTQAAEASAPEAGLEVSEEPGQEAPVLPKDGAVNGPSAAGDHTPTEPQTNAEAPPETPAGSGLEEKVGAEVVPSREETKPSVEEAEAAGVGVETEVAQGATEKSPEDKVKIAAYEETQDKEQMKEGEETEGSEEEDKENDKAEEIPSDSVLENKSLQENEEEEIGNLELAWDMLDLAKIIFKRQDTKEAQLYAAQAHLKLGEVSVESENYVQAVEEFQACLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVTQFSKSIEVIEKRMAVLNEQMKEAEGSPAEYEKEIEELKELLPEIKEKIEDAKESQRSGNVAELALKATLVESSTSGFTPSGGGSSVAMIASRKPADGASSSNCVTDISHLVRKKRKPEEESPRKDDAKKAKQEPEVNGGSGDAVSSGTEVSENMEAENQAESRAAVEGTVEAGATVESTAC", "length": 749, "header": "tr|A0A287BCS0-1|A0A4X1W4K8_PIG Computationally mapped isoform of Nuclear autoantigenic sperm protein OS=Sus scrofa OX=9823 GN=NASP PE=1 SV=2 CANONICAL=A0A4X1W4K8-1" }, "locus": { "chromosome": "6", "start_pos": 165804827, "end_pos": 165774780, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039080.3", "url": "https://www.ensembl.org/id/ENSSSCT00000039080.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054124.3", "url": "https://www.ensembl.org/id/ENSSSCP00000054124.3" } ] } }, { "isoform_ac": "A0A4X1W4K8-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4K8/entry", "sequence": { "sequence": "MAAESTATAAITTELVSADKIEEDAPAPSTSADKVESLDVDSEAKKLLGLGQKHLVMGDIPAAVNAFQEAASLLGKKYGETANECGEAFFFYGKSLLELARMENGVLGNALEGVHVEEEEGEKTEESSLVENNDNIDETEGSEEEDKENDKAEEIPSDSVLENKSLQENEEEEIGNLELAWDMLDLAKIIFKRQDTKEAQLYAAQAHLKLGEVSVESENYVQAVEEFQACLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVTQFSKSIEVIEKRMAVLNEQMKEAEGSPAEYEKEIEELKELLPEIKEKIEDAKESQRSGNVAELALKATLVESSTSGFTPSGGGSSVAMIASRKPADGASSSNCVTDISHLVRKKRKPEEESPRKDDAKKAKQEPEVNGGSGDAVSSGTEVSENMEAENQAESRAAVEGTVEAGATVESTAC", "length": 448, "header": "tr|A0A4X1W4K8-1|A0A4X1W4K8_PIG Isoform 1 of Nuclear autoantigenic sperm protein OS=Sus scrofa OX=9823 GN=NASP PE=1 SV=1 CANONICAL=A0A4X1W4K8-1" }, "locus": { "chromosome": "6", "start_pos": 165804827, "end_pos": 165774780, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054105.3", "url": "https://www.ensembl.org/id/ENSSSCT00000054105.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035499.1", "url": "https://www.ensembl.org/id/ENSSSCP00000035499.1" } ] } }, { "isoform_ac": "A0A5G2QJ28-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ28/entry", "sequence": { "sequence": "MAAESTATAAITTELVSADKIEEDAPAPSTSADKVESLDVDSEAKKLLGLGQKHLVMGDIPAAVNAFQEAASLLGKKYGETANECGEAFFFYGKSLLELARMENGVLGNALEGVHVEEEEGEKTEESSLVENNDNIDEEAREELREQVYDAMGEKEAKKTEDKSLVKLDMEDREQESEMQKSGREDMDISEPAEKLQDKVESTPDQFAETTEDVKGAAAEGLNEAEVTPARPEQEAPDAEEGKSFSGTDIQEEGREKGVSGEVIVSIEENPKEASEEQPVVTLEKQGAAVAIEAVKPVDLGGDEPKEQAAASENEPGKAGLEQLVGQELPPAEESPEVTTQAAEASAPEAGLEVSEEPGQEAPVLPKDGAVNGPSAAGDHTPTEPQTNAEAPPETPAGSGLEEKVGAEVVPSREETKPSVEEAEAAGVGVETEVAQGATEKSPEDKVKIAAYEETQDKEQMKEGEETEGSEEEDKENDKAEEIPSDSVLENKSLQENEEEEIGNLELAWDMLDLAKIIFKRQDTKEAQLYAAQAHLKLGEVSVESENYVQAVEEFQACLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVTQFSKSIEVIEKRMAVLNEQMKEAEGSPAEYEKEIEELKELLPEIKEKIEDAKESQRSGNVAELALKATLVESSTSGFTPSGGGSSVAMIASRKPADGASSSNCVTDISHLVRKKRKPEEESPRKDDAKKAKQEPEVNGGSGDAVSSGTEVSENMEASGHHFPEALLAGSLVFTPVSLRPPKLQCRRLYLQLPHPAQNAGVPAPASNVGLTQGPRG", "length": 810, "header": "tr|A0A5G2QJ28-1|A0A5G2QJ28_PIG Computationally mapped isoform of Nuclear autoantigenic sperm protein OS=Sus scrofa OX=9823 GN=NASP PE=1 SV=1 CANONICAL=A0A4X1W4K8-1" }, "locus": { "chromosome": "6", "start_pos": 165804827, "end_pos": 165770246, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084116.1", "url": "https://www.ensembl.org/id/ENSSSCT00000084116.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062024.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062024.1" } ] } }, { "isoform_ac": "A0A5G2QNZ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNZ4/entry", "sequence": { "sequence": "MAAESTATAAITTELVSADKGKKYGETANECGEAFFFYGKSLLELARMENGVLGNALEGVHVEEEEGEKTEESSLVENNDNIDEEAREELREQVYDAMGEKEAKKTEDKSLVKLDMEDREQESEMQKSGREDMDISEPAEKLQDKVESTPDQFAETTEDVKGAAAEGLNEAEVTPARPEQEAPDAEEGKSFSGTDIQEEGREKGVSGEVIVSIEENPKEASEEQPVVTLEKQGAAVAIEAVKPVDLGGDEPKEQAAASENEPGKAGLEQLVGQELPPAEESPEVTTQAAEASAPEAGLEVSEEPGQEAPVLPKDGAVNGPSAAGDHTPTEPQTNAEAPPETPAGSGLEEKVGAEVVPSREETKPSVEEAEAAGVGVETEVAQGATEKSPEDKVKIAAYEETQDKEQMKEGEETEGSEEEDKENDKAEEIPSDSVLENKSLQENEEEEIGNLELAWDMLDLAKIIFKRQDTKEAQLYAAQAHLKLGEVSVESENYVQAVEEFQACLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVTQFSKSIEVIEKRMAVLNEQMKEAEGSPAEYEKEIEELKELLPEIKEKIEDAKESQRSGNVAELALKATLVESSTSGFTPSGGGSSVAMIASRKPADGASSSNCVTDISHLVRKKRKPEEESPRKDDAKKAKQEPEVNGGSGDAVSSGTEVSENMEAENQAESRAAVEGTVEAGATVESTAC", "length": 722, "header": "tr|A0A5G2QNZ4-1|A0A5G2QNZ4_PIG Computationally mapped isoform of Nuclear autoantigenic sperm protein OS=Sus scrofa OX=9823 GN=NASP PE=1 SV=2 CANONICAL=A0A4X1W4K8-1" }, "locus": { "chromosome": "6", "start_pos": 165804827, "end_pos": 165774780, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069966.2", "url": "https://www.ensembl.org/id/ENSSSCT00000069966.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066613.2", "url": "https://www.ensembl.org/id/ENSSSCP00000066613.2" } ] } }, { "isoform_ac": "A0A5G2QTR8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QTR8/entry", "sequence": { "sequence": "SCSRHLDVDSEAKKLLGLGQKHLVMGDIPAAVNAFQEAASLLMENGVLGNALEGVHVEEEEGEKTEESSLVENNDNIDEEAREELREQVYDAMGEKEAKKTEDKSLVKLDMEDREQESEMQKSGREDMDISEPAEKLQDKVESTPDQFAETTEDVKGAAAEGLNEAEVTPARPEQEAPDAEEGKSFSGTDIQEEGREKGVSGEVIVSIEENPKEASEEQPVVTLEKQGAAVAIEAVKPVDLGGDEPKEQAAASENEPGKAGLEQLVGQELPPAEESPEVTTQAAEASAPEAGLEVSEEPGQEAPVLPKDGAVNGPSAAGDHTPTEPQTNAEAPPETPAGSGLEEKVGAEVVPSREETKPSVEEAEAAGVGVETEVAQGATEKSPEDKVKIAAYEETQDKEQMKEGEETEGSEEEDKENDKAEEIPSDSVLENKSLQENEEEEIGNLELAWDMLDLAKIIFKRQDTKEAQLYAAQAHLKLGEVSVESENYVQAVEEFQACLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVTQFSKSIEVIEKRMAVLNEQMKEAEGSPAEYEKEIEELKELLPEIKEKIEDAKESQRSGNVAELALKATLVESSTSGFTPSGGGSSVAMIASRKPADGASSSNCVTDISHLVRKKRKPEEESPRKDDAKKAKQEPEVNGGSGDAVSSGTEVSENMEVGS", "length": 694, "header": "tr|A0A5G2QTR8-1|A0A4X1W4K8_PIG Computationally mapped isoform of Nuclear autoantigenic sperm protein OS=Sus scrofa OX=9823 GN=NASP PE=1 SV=1 CANONICAL=A0A4X1W4K8-1" }, "locus": { "chromosome": "6", "start_pos": 165789749, "end_pos": 165775740, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079319.2", "url": "https://www.ensembl.org/id/ENSSSCT00000079319.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068326.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068326.1" } ] } }, { "isoform_ac": "A0A5G2QWX4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWX4/entry", "sequence": { "sequence": "MAAESTATAAITTELVSADKIEEDAPAPSTSADKVERMENGVLGNALEGVHVEEEEGEKTEESSLVENNDNIDEEAREELREQVYDAMGEKEAKKTEDKSLVKLDMEDREQESEMQKSGREDMDISEPAEKLQDKVESTPDQFAETTEDVKGAAAEGLNEAEVTPARPEQEAPDAEEGKSFSGTDIQEEGREKGVSGEVIVSIEENPKEASEEQPVVTLEKQGAAVAIEAVKPVDLGGDEPKEQAAASENEPGKAGLEQLVGQELPPAEESPEVTTQAAEASAPEAGLEVSEEPGQEAPVLPKDGAVNGPSAAGDHTPTEPQTNAEAPPETPAGSGLEEKVGAEVVPSREETKPSVEEAEAAGVGVETEVAQGATEKSPEDKVKIAAYEETQDKEQMKEGEETEGSEEEDKENDKAEEIPSDSVLENKSLQENEEEEIGNLELAWDMLDLAKIIFKRQDTKEAQLYAAQAHLKLGEVSVESENYVQAVEEFQACLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVTQFSKSIEVIEKRMAVLNEQMKEAEGSPAEYEKEIEELKELLPEIKEKIEDAKESQRSGNVAELALKATLVESSTSGFTPSGGGSSVAMIASRKPADGASSSNCVTDISHLVRKKRKPEEESPRKDDAKKAKQEPEVNGGSGDAVSSGTEVSENMEAENQAESRAAVEGTVEAGATVESTAC", "length": 712, "header": "tr|A0A5G2QWX4-1|A0A4X1W4K8_PIG Computationally mapped isoform of Nuclear autoantigenic sperm protein OS=Sus scrofa OX=9823 GN=NASP PE=1 SV=1 CANONICAL=A0A4X1W4K8-1" }, "locus": { "chromosome": "6", "start_pos": 165804827, "end_pos": 165774780, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077698.2", "url": "https://www.ensembl.org/id/ENSSSCT00000077698.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069371.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069371.1" } ] } }, { "isoform_ac": "A0A5G2R3S8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3S8/entry", "sequence": { "sequence": "SCSRHLDVDSEAKKLLGLGQKHLVMGDIPAAVNAFQEAASLLGKKYGETANECGEAFFFYGKSLLELARMENGVLGNALEGVHVEEEEGEKTEESSLVENNDNIDEEAREELREQVYDAMGEKEAKKTEDKSLVKLDMEDREQESEMQKSGREDMDISEPAEKLQDKVESTPDQFAETTEDVKGAAAEGLNEAEVTPARPEQEAPDAEEGKSFSGTDIQEEGREKGVSGEVIVSIEENPKEASEEQPVVTLEKQGAAVAIEAVKPVDLGGDEPKEQAAASENEPGKAGLEQLVGQELPPAEESPEVTTQAAEASAPEAGLEVSEEPGQEAPVLPKDGAVNGPSAAGDHTPTEPQTNAEAPPETPAGSGLEEKVGAEVVPSREETKPSVEEAEAAGVGVETEVAQGATEKSPEDKVKIAAYEETQDKEQMKEGEETEGSEEEDKENDKAEEIPSDSVLENKSLQENEEEEIGNLELAWDMLDLAKIIFKRQDTKEAQLYAAQAHLKLGEVSVESENYVQAVEEFQACLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVTQFSKSIEVIEKRMAVLNEQMKEAEGSPAEYEKEIEELKELLPEIKEKIEDAKESQRSGNVAELALKATLVESSTSGFTPSGGGSSVAMIASRKPADGASSSNCVTDISHLVRKKRKPEEESPRKDDAKKAKQEPEVNGGSGDAVSSGTEVSENMEAENQAESRAAVEGTVEAGATVESTAC", "length": 744, "header": "tr|A0A5G2R3S8-1|A0A4X1W4K8_PIG Computationally mapped isoform of Nuclear autoantigenic sperm protein OS=Sus scrofa OX=9823 GN=NASP PE=1 SV=1 CANONICAL=A0A4X1W4K8-1" }, "locus": { "chromosome": "6", "start_pos": 165789749, "end_pos": 165774780, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078444.2", "url": "https://www.ensembl.org/id/ENSSSCT00000078444.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070993.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070993.1" } ] } }, { "isoform_ac": "A0A8W4FH39-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FH39/entry", "sequence": { "sequence": "MAAESTATAAITTELVSADKMENGVLGNALEGVHVEEEEGEKTEESSLVENNDNIDEEAREELREQVYDAMGEKEAKKTEDKSLVKLDMEDREQESEMQKSGREDMDISEPAEKLQDKVESTPDQFAETTEDVKGAAAEGLNEAEVTPARPEQEAPDAEEGKSFSGTDIQEEGREKGVSGEVIVSIEENPKEASEEQPVVTLEKQGAAVAIEAVKPVDLGGDEPKEQAAASENEPGKAGLEQLVGQELPPAEESPEVTTQAAEASAPEAGLEVSEEPGQEAPVLPKDGAVNGPSAAGDHTPTEPQTNAEAPPETPAGSGLEEKVGAEVVPSREETKPSVEEAEAAGVGVETEVAQGATEKSPEDKVKIAAYEETQDKEQMKEGEETEGSEEEDKENDKAEEIPSDSVLENKSLQENEEEEIGNLELAWDMLDLAKIIFKRQDTKEAQLYAAQAHLKLGEVSVESENYVQAVEEFQACLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVTQFSKSIEVIEKRMAVLNEQMKEAEGSPAEYEKEIEELKELLPEIKEKIEDAKESQRSGNVAELALKATLVESSTSGFTPSGGGSSVAMIASRKPADGASSSNCVTDISHLVRKKRKPEEESPRKDDAKKAKQEPEVNGGSGDAVSSGTEVSENMEAENQAESRAAVEGTVEAGATVESTAC", "length": 695, "header": "tr|A0A8W4FH39-1|A0A4X1W4K8_PIG Computationally mapped isoform of Nuclear autoantigenic sperm protein OS=Sus scrofa OX=9823 GN=NASP PE=1 SV=1 CANONICAL=A0A4X1W4K8-1" }, "locus": { "chromosome": "6", "start_pos": 165804827, "end_pos": 165774780, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093684.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093684.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078552.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078552.1" } ] } }, { "isoform_ac": "I3LRP1-1", "url": "https://www.uniprot.org/uniprotkb/I3LRP1/entry", "sequence": { "sequence": "MAAESTATAAITTELVSADKIEEDAPAPSTSADKVESLDVDSEAKKLLGLGQKHLVMGDIPAAVNAFQEAASLLGKKYGETANECGEAFFFYGKSLLELARMENGVLGNALEGVHVEEEEGEKTEESSLVENNDNIDEEAREELREQVYDAMGEKEAKKTEDKSLVKLDMEDREQESEMQKSGREDMDISEPAEKLQDKVESTPDQFAETTEDVKGAAAEGLNEAEVTPARPEQEAPDAEEGKSFSGTDIQEEGREKGVSGEVIVSIEENPKEASEEQPVVTLEKQGAAVAIEAVKPVDLGGDEPKEQAAASENEPGKAGLEQLVGQELPPAEESPEVTTQAAEASAPEAGLEVSEEPGQEAPVLPKDGAVNGPSAAGDHTPTEPQTNAEAPPETPAGSGLEEKVGAEVVPSREETKPSVEEAEAAGVGVETEVAQGATEKSPEDKVKIAAYEETQDKEQMKEGEETEGSEEEDKENDKAEEIPSDSVLENKSLQENEEEEIGNLELAWDMLDLAKIIFKRQDTKEAQLYAAQAHLKLGEVSVESENYVQAVEEFQACLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVTQFSKSIEVIEKRMAVLNEQMKEAEGSPAEYEKEIEELKELLPEIKEKIEDAKESQRSGNVAELALKATLVESSTSGFTPSGGGSSVAMIASRKPADGASSSNCVTDISHLVRKKRKPEEESPRKDDAKKAKQEPEVNGGSGDAVSSGTEVSENMEAENQAESRAAVEGTVEAGATVESTAC", "length": 776, "header": "tr|I3LRP1-1|A0A4X1W4K8_PIG Computationally mapped isoform of Nuclear autoantigenic sperm protein OS=Sus scrofa OX=9823 GN=NASP PE=1 SV=2 CANONICAL=A0A4X1W4K8-1" }, "locus": { "chromosome": "6", "start_pos": 165804827, "end_pos": 165774780, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022777.4", "url": "https://www.ensembl.org/id/ENSSSCT00000022777.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000026779.2", "url": "https://www.ensembl.org/id/ENSSSCP00000026779.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FH39", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FH39" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100622547", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622547", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1A5R8-1", "protein_name": "Nuclear autoantigenic sperm protein", "gene_name": "NASP", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSSAAARCVEPASAAPDRMEEDLAAPSTSADRTDSMDVDAESKKLLGLGQKHLVMGNIPAAVNAFQEAASLLGKKYGETADECAEAFFYYGKSLLELARMENGVLGNALEGVQVEEEGEKAEDDSALPAVDEEAREELREQVYNAMGEKEEVKKSPVLTEKEIKGEDVEMKDVTEEKPKEDTVTDMEVKLEGSEEKTETSVEKVNSEEHGPQTAVEKNTEEAAVEEKAVEKEQKTKHEEAEATEGRNSMKEVLGEEAKAAVEEDEAAEAPAEKKGGAGEQTAEARETETTMEKGESIEGQAEVAVEEKAMSQEGRAEGQAAVTAEQKEAAEEQAEAAEKKVEEKESAETAPEQKPDESKGMDTSKEPVSAVGEGPANDTGEKTEVAAKVEKEEKKDDLMEESEGAKVEKEEKDDQMEEGEETEESEEEDKENDKAEDDKENELAVEDKESEEEEIGNLELAWDMLELAKVIYKRQETKEAQLHAAQAHLKLGEVSIESENYVQAIEEFQACLALQQKYLEAHDRLLAESHYQLALAYHYNSQFDEAVLQFGKSVEVIDKRLAMLTERIKKAESGSPEDEKEIEELKGLLPEIKEKIEDSKESQKSARVAELALKATLVGTTSGFAQSEGSGSVSTIPVRKAADGASQCVTDISHLVRKKRKPEEETHQGDNEAKKSKPEPAVNGGGGDAAPSGNEVAEKMEEETEKRPQAEPGAAVESTV", "length": 721 }, "evidence": [ { "id": "A0A4X1W4K8", "url": "https://omabrowser.org/oma/group/A0A4X1W4K8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "P49321-1", "protein_name": "Nuclear autoantigenic sperm protein", "gene_name": "NASP", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAMESTATAAVAAELVSADKIEDVPAPSTSADKVESLDVDSEAKKLLGLGQKHLVMGDIPAAVNAFQEAASLLGKKYGETANECGEAFFFYGKSLLELARMENGVLGNALEGVHVEEEEGEKTEDESLVENNDNIDEEAREELREQVYDAMGEKEEAKKTEDKSLAKPETDKEQDSEMEKGGREDMDISKSAEEPQEKVDLTLDWLTETSEEAKGGAAPEGPNEAEVTSGKPEQEVPDAEEEKSVSGTDVQEECREKGGQEKQGEVIVSIEEKPKEVSEEQPVVTLEKQGTAVEVEAESLDPTVKPVDVGGDEPEEKVVTSENEAGKAVLEQLVGQEVPPAEESPEVTTEAAEASAVEAGSEVSEKPGQEAPVLPKDGAVNGPSVVGDQTPIEPQTSIERLTETKDGSGLEEKVRAKLVPSQEETKLSVEESEAAGDGVDTKVAQGATEKSPEDKVQIAANEETQEREEQMKEGEETEGSEEDDKENDKTEEMPNDSVLENKSLQENEEEEIGNLELAWDMLDLAKIIFKRQETKEAQLYAAQAHLKLGEVSVESENYVQAVEEFQSCLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVAQFSKSIEVIENRMAVLNEQVKEAEGSSAEYKKEIEELKELLPEIREKIEDAKESQRSGNVAELALKATLVESSTSGFTPGGGGSSVSMIASRKPTDGASSSNCVTDISHLVRKKRKPEEESPRKDDAKKAKQEPEVNGGSGDAVPSGNEVSENMEEEAENQAESRAAVEGTVEAGATVESTAC", "length": 788 }, "evidence": [ { "id": "A0A4X1W4K8", "url": "https://omabrowser.org/oma/group/A0A4X1W4K8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q2T9P4-1", "protein_name": "Nuclear autoantigenic sperm protein", "gene_name": "NASP", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAAESTATAAITAELVSADKIEEDAPAPSTSADKVESLDVDSEAKKLLGLGQKHLVMGDIPAAVNAFQEAASLLGKKYGETANECGEAFFFYGKSLLELARMENGVLGNALEGVHVEEEEGEKTEEESLVENNDNIDEEAREELREQVYDAMGEKEAQKTEDKSLVKPEMDKEQETEMEKGGREDMDIGEPAEELQEKVKSAPDQLTETTEEGKGAAAPEGLSEAEVTSKKPDQEIPGAEEGKSVSETDVQEECREKGGQGEVIVSIEEKPKEASKEQPVVTLEKQGTPVEIEAVKPVDMGGDEPKEQVAASESERGKAILEQLVGQELPSAEESPEVTTQAADASAAEAGSEVSEKPGGQDTVLPQDGAVNGLSAAGDHASTKPQTNAEGLIGTKDGSALEKVRAELVPSQETKLSVEESEAAGDGVETEVAQGATEQSPEDKVKIAANEEAQDKEEQMKEGEETEGSEEEDKENDKAEETLNDSALENKSLQENEEEEIGNLELAWDMLDLAKIIFKRQDTKEAQLYAAQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVAQFSKSIEVIEKRMAVLNEQMKEAEGSPTEYEKEIEELKELLPEIREKIEDAKESQRSGNVAELALKATLVESSTSGFTPSGGSSSVSMIASRKPTDGASSSNCVTDISHLVRKKRKPEEESPRKDDAKKAKQEPEVNGGSGDTISTGTEVAENMEEEAENKAESRAAVEGTVEAGATVESTAC", "length": 777 }, "evidence": [ { "id": "A0A4X1W4K8", "url": "https://omabrowser.org/oma/group/A0A4X1W4K8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q66HD3-1", "protein_name": "Nuclear autoantigenic sperm protein", "gene_name": "Nasp", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MATESTATAAIAAELVSADKVEDAPAPSTSADKMESLDVDSEAKKLLGLGQKHLVMGDIPAAVNAFQEAASLLGKKYGETANECGEAFFFYGKSLLELARMENGVLGNALEGVHVEEEEGEKTEDESLVENNDNVDEEAREELREQVYDAMGEKEAKKAEGQSLTKPETDKEQESEVEKGGREDMDISEPAEKLQEKVESTSKQLTESSEEAKEAAIPGLNEDEVTSGKTEQESLCTEEGKSISGVYVQNKEFREAVPQEEGEEMISLEKKPKETSEDQTIGAPEKQDTLMKVVEIEAEIDSEVKSVDVGGEEPKDQGAISESELGKAVLMQLSGQDVEVSPVVAAEAGSEVSEKPGQEITVLPNNGPVVGQSSAGDQTPSEPQNSAERLSETKDGASVEEVKAELVPEQEEAMPPVEESEAAGDGVETKVAQRATEKAPEDKFKIAANEETQERDEQMKEGEETEGSEEEDKENDKAEETTNESVLEKKTLQENEEEEIGNLELAWDMLDLAKIIFKRQETKEAQLYAAQAHLKLGEVSVESENYIQAVEEFQACLSLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVAQFGKSIDVIEKRMAVLLEQMKEAEGSFTEYEKEIEELKELLPEIREKIEDAKESQRSGNVAELALKATLVESSTSGFTPSGAGASVSMIASRKPTDGASSSNCVTDISHLVRKKRKPEEESPRKDDAKKAKPEPEVNGGSGDAVSSGNEVSENMEAEAENQAESQTTAEGTVDSAATVKSTAC", "length": 776 }, "evidence": [ { "id": "A0A4X1W4K8", "url": "https://omabrowser.org/oma/group/A0A4X1W4K8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q99MD9-1", "protein_name": "Nuclear autoantigenic sperm protein", "gene_name": "Nasp", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATESTAAAAIAAELVSADKIEDAPAPSTSADKMESLDVDSEAKKLLGLGQKHLVMGDIPAAVNAFQEAASLLGKKYGETANECGEAFFFYGKSLLELARMENGVLGNALEGVHVEEEEGEKTEDESLVENNDNVDEEAREELREQVYDAMGEKEAKKAEGKSLTKPETDKEQESEVEKGGREDMDISEPEEKLQETVEPTSKQLTESSEEAKEAAIPGLNEDEVASGKTEQESLCTEKGKSISGAYVQNKEFRETVEEGEEIISLEKKPKETSEDQPIRAAEKQGTLMKVVEIEAEIDPQVKSADVGGEEPKDQVATSESELGKAVLMELSGQDVEASPVVAAEAGAEVSEKPGQEITVIPNNGPVVGQSTVGDQTPSEPQTSAERLTETKDGSSVEEVKAELVPEQEEAMLPVEESEAAGDGVETKVAQKATEKAPEDKFKIAANEETPERDEQMKEGEETEGSEEEDRENDKAEETPNESVLEKKSLQENEEEEIGNLELAWDMLDLAKIIFKRQETKEAQLYAAQAHLKLGEVSVESENYIQAVEEFQACLSLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVAQFGKSIDVIEKRMAVLHEQMKEAEGSFTEYEKEIEELKELLPEIREKIEDAKESQRSGNVAELALKATLVESSTSGFTPSGAGASVSMIASRKPTDGASSSNCVTDISHLVRKKRKPEEESPRKDDAKKAKQEPEVNGGSGDAVSSGKEVSENMEAEAENQAESQTAEGTVESAATIKSTAC", "length": 773 }, "evidence": [ { "id": "A0A4X1W4K8", "url": "https://omabrowser.org/oma/group/A0A4X1W4K8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W4K8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4K8" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W4K8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4K8" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W4K8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4K8" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W4K8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4K8" } ], "pmid": "" }, { "name": "protein-containing complex", "id": "GO:0032991", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032991", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W4K8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4K8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "nucleosome assembly", "id": "GO:0006334", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006334", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W4K8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4K8" } ], "pmid": "" }, { "name": "DNA replication-dependent chromatin assembly", "id": "GO:0006335", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006335", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W4K8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4K8" } ], "pmid": "" }, { "name": "CENP-A containing chromatin assembly", "id": "GO:0034080", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034080", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W4K8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4K8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "histone binding", "id": "GO:0042393", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042393", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W4K8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4K8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 163, "end_pos": 165, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1W4K8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4K8" }, { "id": "PF10516", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10516" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Tetratricopeptide 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"Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287BB33", "url": "https://www.uniprot.org/uniprotkb/A0A287BB33", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BB33-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BB33-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QA44-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RAG7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RAG7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RAG7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RAG7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RBJ2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RBJ2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RBJ2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RBJ2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SCI9", "url": "https://www.uniprot.org/uniprotkb/F1SCI9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SCI9-1", "url": "https://www.uniprot.org/uniprotkb/F1SCI9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPRVLRQLNFSLKVNVLVYKSRVTRNYLTGLGGEVTGSSDGGAAPDPKGFVVWWAQRTQHSEPGPHFPAEILSGVIRSVKKDGEWKVLIMDHPSMRILSSCCKMSDILAEGITIVEDINKRREPIPSLEAIYLLSPTEKSVQALIADFRGTPTFTYKAAHVFFTDTCPEPLFSELGRSRLAKMVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLYCPFRAGERARQLEVLAQQIATLCATLQEYPAIRYRKGPEDTAQLAHAVLAKLNAFKADTPSLGEGPEKTRSQLLIMDRAADPVSPLLHELTFQAMAYDLLAIEQDTYRYETTGLSEAREKAVLLDEDDDLWVELRHMHIADVSKKVTELLKTFCESKRLTTDKANIKDLSHILKKMPQYQKELNKYSTHLHLADDCMKRFKGCVEKLCSVEQDLAMGSDAEGEKIKDAMKLIVPVLLDAAVPAYDKIRVLLLYILLRNGVSEENLAKLIQHANVQAHSSLIRNLEQLGATVTNPGGSGTSSRLERRERLEPTYQLSRWTPVVKDVMEDAVEDRLDRKLWPFVSDPAPMPSSQAAVSARFGHWHKNKAGVEARAGPRLIIYIVGGVSMSEMRAAYEVTRATDGKWEVLIGGETSESSESGPGFLRPQAGGMEGGCGVQHQCPRQHLQLCPRAHQAPPTSSHRPASWMTSRCWTRSWRTFPCLDPPTPI", "length": 701, "header": "tr|A0A5G2QA44-1|A0A5G2QA44_PIG Isoform 1 of Syntaxin binding protein 2 OS=Sus scrofa OX=9823 GN=STXBP2 PE=1 SV=2 CANONICAL=A0A5G2QA44-1" }, "isoforms": [ { "isoform_ac": "A0A287BB33-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BB33/entry", "sequence": { "sequence": "MPRVLRQLNFSLKVNVLVYKSRVTRNYLTGLGGEVTGSSDGGAAPDPKGFVVWWAQRTQHSEPGPHFPAEILSGVIRSVKKDGEWKVLIMDHPSMRILSSCCKMSDILAEGITIVEDINKRREPIPSLEAIYLLSPTEKSVQALIADFRGTPTFTYKAAHVFFTDTCPEPLFSELGRSRLAKMVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLYCPFRAGERARQLEVLAQQIATLCATLQEYPAIRYRKGPEDTAQLAHAVLAKLNAFKADTPSLGEGPEKTRSQLLIMDRAADPVSPLLHELTFQAMAYDLLAIEQDTYRYETTGLSEAREKAVLLDEDDDLWVELRHMHIADVSKKVTELLKTFCESKRLTTDKANIKDLSHILKKMPQYQKELNKYSTHLHLADDCMKRFKGCVEKLCSVEQDLAMGSDAEGEKIKDAMKLIVPVLLDAAVPAYDKIRVLLLYILLRNGVSEENLAKLIQHANVQAHSSLIRNLEQLGATVTNPGDRLDRKLWPFVSDPAPMPSSQAAVSARFGHWHKNKAGVEARAGPRLIIYIVGGVSMSEMRAAYEVTRATDGKWEVLIGSSHILTPTRFLDDLKMLDQKLEDISLP", "length": 614, "header": "tr|A0A287BB33-1|A0A5G2QA44_PIG Computationally mapped isoform of Syntaxin binding protein 2 OS=Sus scrofa OX=9823 GN=STXBP2 PE=1 SV=2 CANONICAL=A0A5G2QA44-1" }, "locus": { "chromosome": "2", "start_pos": 71512228, "end_pos": 71504641, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053089.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053089.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053276.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053276.2" } ] } }, { "isoform_ac": "A0A5G2QA44-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44/entry", "sequence": { "sequence": "MPRVLRQLNFSLKVNVLVYKSRVTRNYLTGLGGEVTGSSDGGAAPDPKGFVVWWAQRTQHSEPGPHFPAEILSGVIRSVKKDGEWKVLIMDHPSMRILSSCCKMSDILAEGITIVEDINKRREPIPSLEAIYLLSPTEKSVQALIADFRGTPTFTYKAAHVFFTDTCPEPLFSELGRSRLAKMVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLYCPFRAGERARQLEVLAQQIATLCATLQEYPAIRYRKGPEDTAQLAHAVLAKLNAFKADTPSLGEGPEKTRSQLLIMDRAADPVSPLLHELTFQAMAYDLLAIEQDTYRYETTGLSEAREKAVLLDEDDDLWVELRHMHIADVSKKVTELLKTFCESKRLTTDKANIKDLSHILKKMPQYQKELNKYSTHLHLADDCMKRFKGCVEKLCSVEQDLAMGSDAEGEKIKDAMKLIVPVLLDAAVPAYDKIRVLLLYILLRNGVSEENLAKLIQHANVQAHSSLIRNLEQLGATVTNPGGSGTSSRLERRERLEPTYQLSRWTPVVKDVMEDAVEDRLDRKLWPFVSDPAPMPSSQAAVSARFGHWHKNKAGVEARAGPRLIIYIVGGVSMSEMRAAYEVTRATDGKWEVLIGGETSESSESGPGFLRPQAGGMEGGCGVQHQCPRQHLQLCPRAHQAPPTSSHRPASWMTSRCWTRSWRTFPCLDPPTPI", "length": 701, "header": "tr|A0A5G2QA44-1|A0A5G2QA44_PIG Isoform 1 of Syntaxin binding protein 2 OS=Sus scrofa OX=9823 GN=STXBP2 PE=1 SV=2 CANONICAL=A0A5G2QA44-1" }, "locus": { "chromosome": "2", "start_pos": 71512228, "end_pos": 71504622, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089591.2", "url": "https://www.ensembl.org/id/ENSSSCT00000089591.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060228.2", "url": "https://www.ensembl.org/id/ENSSSCP00000060228.2" } ] } }, { "isoform_ac": "A0A5G2RAG7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RAG7/entry", "sequence": { "sequence": "MAPSGLKAVVGESEVTRNYLTGLGGEVTGSSDGGAAPDPKGFVVWWAQRTQHSEPGPHFPAEILSGVIRSVKKDGEWKVLIMDHPSMRILSSCCKMSDILAEGITIVEDINKRREPIPSLEAIYLLSPTEKSVQALIADFRGTPTFTYKAAHVFFTDTCPEPLFSELGRSRLAKMVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLYCPFRAGERARQLEVLAQQIATLCATLQEYPAIRYRKGPEDTAQLAHAVLAKLNAFKADTPSLGEGPEKTRSQLLIMDRAADPVSPLLHELTFQAMAYDLLAIEQDTYRYETTGLSEAREKAVLLDEDDDLWVELRHMHIADVSKKVTELLKTFCESKRLTTDKANIKDLSHILKKMPQYQKELNKYSTHLHLADDCMKRFKGCVEKLCSVEQDLAMGSDAEGEKIKDAMKLIVPVLLDAAVPAYDKIRVLLLYILLRNGVSEENLAKLIQHANVQAHSSLIRNLEQLGATVTNPGGSGTSSRLERRERLEPTYQLSRWTPVVKDVMEDAVEDRLDRKLWPFVSDPAPMPSSQAAVSARFGHWHKNKAGVEARAGPRLIIYIVGGVSMSEMRAAYEVTRATDGKWEVLIGSSHILTPTRFLDDLKMLDQKLEDISLP", "length": 642, "header": "tr|A0A5G2RAG7-1|A0A5G2QA44_PIG Computationally mapped isoform of Syntaxin binding protein 2 OS=Sus scrofa OX=9823 GN=STXBP2 PE=1 SV=2 CANONICAL=A0A5G2QA44-1" }, "locus": { "chromosome": "2", "start_pos": 71513387, "end_pos": 71504641, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079933.2", "url": "https://www.ensembl.org/id/ENSSSCT00000079933.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071120.2", "url": "https://www.ensembl.org/id/ENSSSCP00000071120.2" } ] } }, { "isoform_ac": "A0A5G2RBJ2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RBJ2/entry", "sequence": { "sequence": "MAPSGLKAVVGEIVEDINKRREPIPSLEAIYLLSPTEKSVQALIADFRGTPTFTYKAAHVFFTDTCPEPLFSELGRSRLAKMVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLYCPFRAGERARQLEVLAQQIATLCATLQEYPAIRYRKGPEDTAQLAHAVLAKLNAFKADTPSLGEGPEKTRSQLLIMDRAADPVSPLLHELTFQAMAYDLLAIEQDTYRYETTGLSEAREKAVLLDEDDDLWVELRHMHIADVSKKVTELLKTFCESKRLTTDKANIKDLSHILKKMPQYQKELNKYSTHLHLADDCMKRFKGCVEKLCSVEQDLAMGSDAEGEKIKDAMKLIVPVLLDAAVPAYDKIRVLLLYILLRNGVSEENLAKLIQHANVQAHSSLIRNLEQLGATVTNPGGSGTSSRLERRERLEPTYQLSRWTPVVKDVMEDAVEDRLDRKLWPFVSDPAPMPSSQAAVSARFGHWHKNKAGVEARAGPRLIIYIVGGVSMSEMRAAYEVTRATDGKWEVLIGSSHILTPTRFLDDLKMLDQKLEDISLP", "length": 549, "header": "tr|A0A5G2RBJ2-1|A0A5G2QA44_PIG Computationally mapped isoform of Syntaxin binding protein 2 OS=Sus scrofa OX=9823 GN=STXBP2 PE=1 SV=1 CANONICAL=A0A5G2QA44-1" }, "locus": { "chromosome": "2", "start_pos": 71513387, "end_pos": 71504641, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088882.2", "url": "https://www.ensembl.org/id/ENSSSCT00000088882.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074382.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074382.1" } ] } }, { "isoform_ac": "F1SCI9-1", "url": "https://www.uniprot.org/uniprotkb/F1SCI9/entry", "sequence": { "sequence": "MPRVLRQLNFSLKVNVLVYKSRVTRNYLTGLGGEVTGSSDGEILSGVIRSVKKDGEWKVLIMDHPSMRILSSCCKMSDILAEGITIVEDINKRREPIPSLEAIYLLSPTEKSVQALIADFRGTPTFTYKAAHVFFTDTCPEPLFSELGRSRLAKMVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLYCPFRAGERARQLEVLAQQIATLCATLQEYPAIRYRKGPEDTAQLAHAVLAKLNAFKADTPSLGEGPEKTRSQLLIMDRAADPVSPLLHELTFQAMAYDLLAIEQDTYRYETTGLSEAREKAVLLDEDDDLWVELRHMHIADVSKKVTELLKTFCESKRLTTDKANIKDLSHILKKMPQYQKELNKYSTHLHLADDCMKRFKGCVEKLCSVEQDLAMGSDAEGEKIKDAMKLIVPVLLDAAVPAYDKIRVLLLYILLRNGVSEENLAKLIQHANVQAHSSLIRNLEQLGATVTNPGGSGTSSRLERRERLEPTYQLSRWTPVVKDVMEDAVEDRLDRKLWPFVSDPAPMPSSQAAVSARFGHWHKNKAGVEARAGPRLIIYIVGGVSMSEMRAAYEVTRATDGKWEVLIGSSHILTPTRFLDDLKMLDQKLEDISLP", "length": 622, "header": "tr|F1SCI9-1|A0A5G2QA44_PIG Computationally mapped isoform of Syntaxin binding protein 2 OS=Sus scrofa OX=9823 GN=STXBP2 PE=1 SV=5 CANONICAL=A0A5G2QA44-1" }, "locus": { "chromosome": "2", "start_pos": 71512228, "end_pos": 71504641, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014828.5", "url": "https://www.ensembl.org/id/ENSSSCT00000014828.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014427.5", "url": "https://www.ensembl.org/id/ENSSSCP00000014427.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SCI9", "url": "https://www.uniprot.org/uniprotkb/F1SCI9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-114608", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-114608", "resource": "Reactome", "description": "Platelet degranulation" }, { "id": "R-SSC-449836", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-449836", "resource": "Reactome", "description": "Other interleukin signaling" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 8, "go_terms": [ { "name": "protein transport", "id": "GO:0015031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015031", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44" } ], "pmid": "" }, { "name": "vesicle-mediated transport", "id": "GO:0016192", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016192", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44" } ], "pmid": "" }, { "name": "intracellular protein transport", "id": "GO:0006886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006886", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44" } ], "pmid": "" }, { "name": "neutrophil degranulation", "id": "GO:0043312", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043312", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44" } ], "pmid": "" }, { "name": "leukocyte mediated cytotoxicity", "id": "GO:0001909", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001909", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44" } ], "pmid": "" }, { "name": "presynaptic dense core vesicle exocytosis", "id": "GO:0099525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099525", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44" } ], "pmid": "" }, { "name": "vesicle docking involved in exocytosis", "id": "GO:0006904", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006904", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44" } ], "pmid": "" }, { "name": "regulation of regulated secretory pathway", "id": "GO:1903305", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1903305", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "syntaxin binding", "id": "GO:0019905", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019905", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44" } ], "pmid": "" }, { "name": "syntaxin-3 binding", "id": "GO:0030348", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030348", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44" } ], "pmid": "" }, { "name": "syntaxin-1 binding", "id": "GO:0017075", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017075", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 12, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44" } ], "pmid": "" }, { "name": "secretory granule", "id": "GO:0030141", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030141", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44" } ], "pmid": "" }, { "name": "apical plasma membrane", "id": "GO:0016324", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016324", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44" } ], "pmid": "" }, { "name": "specific granule", "id": "GO:0042581", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042581", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44" } ], "pmid": "" }, { "name": "tertiary granule", "id": "GO:0070820", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070820", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44" } ], "pmid": "" }, { "name": "phagocytic vesicle", "id": "GO:0045335", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045335", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44" } ], "pmid": "" }, { "name": "azurophil granule", "id": "GO:0042582", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042582", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44" } ], "pmid": "" }, { "name": "presynapse", "id": "GO:0098793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098793", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44" } ], "pmid": "" }, { "name": "cytolytic granule", "id": "GO:0044194", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0044194", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44" } ], "pmid": "" }, { "name": "zymogen granule membrane", "id": "GO:0042589", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042589", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA44" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 9, "end_pos": 11, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QA44-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 701, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QA44-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QA44" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 9, "end_pos": 11 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"gene_names": [ { "name": "RPH3A", "type": "recommended", "evidence": [ { "id": "A0A5G2QAK6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6" } ] } ], "protein_names": [ { "name": "Rabphilin-3A", "type": "recommended", "evidence": [ { "id": "A0A5G2QAK6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6/entry#names_and_taxonomy" } ] }, { "name": "Exophilin-1", "type": "synonym", "evidence": [ { "id": "A0A5G2QAK6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Plays an essential role in docking and fusion steps of regulated exocytosis. At the presynaptic level, RPH3A is recruited by RAB3A to the synaptic vesicle membrane in a GTP-dependent manner where it modulates synaptic vesicle trafficking and calcium-triggered neurotransmitter release. In the post-synaptic compartment, forms a ternary complex with GRIN2A and DLG4 and regulates NMDA receptor stability. Also plays a role in the exocytosis of arginine vasopressin hormone.", "evidence": [ { "database": "UniProtKB", "id": "A0A287AX24", "url": "https://www.uniprot.org/uniprotkb/A0A287AX24#function" }, { "database": "UniProtKB", "id": "ARBA00060345", "url": "https://www.uniprot.org/uniprotkb/ARBA00060345#function" }, { "database": "UniProtKB", "id": "A0A480E5D8", "url": "https://www.uniprot.org/uniprotkb/A0A480E5D8#function" }, { "database": "UniProtKB", "id": "A0A5G2QAK6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAK6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RPH3A", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6", "locus": { "chromosome": "14", "start_pos": 38867099, "end_pos": 38969169, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000009883", "url": "https://www.ensembl.org/id/ENSSSCG00000009883" } ] } } ], "crossref": [ { "id": "A0A5G2QAK6", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QAK6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000009883", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000009883", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd04035", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04035", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd08384", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd08384", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd15762", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd15762", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100736858", "url": "https://www.ncbi.nlm.nih.gov/gene/100736858", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000008", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000008", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001565", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001565", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR010911", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010911", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011011", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011011", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017455", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017455", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR028698", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028698", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035892", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035892", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041282", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041282", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043566", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043566", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047022", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047022", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100736858", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100736858", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR45729", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45729", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45729:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45729:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00168", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00168", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02318", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02318", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287AX24", "url": "https://www.uniprot.org/uniprotkb/A0A287AX24", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AX24-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AX24-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A480E5D8", "url": "https://www.uniprot.org/uniprotkb/A0A480E5D8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A480E5D8-1", "url": "https://www.uniprot.org/uniprotkb/A0A480E5D8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TH12", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TH12", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TH12-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TH12-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QAK6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QAK6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RDV2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RDV2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RDV2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RDV2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1AYD2", "url": "https://www.uniprot.org/uniprotkb/A0A8D1AYD2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1AYD2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1AYD2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F785", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F785", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F785-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F785-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FL15", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FL15", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FL15-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FL15-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTDTVFSNSSSRWMCPSDRPLQSNPKLPFRLQTGWSVHPSGQPDRQRKQEELTDEEKEIINRVIARAEKMEEMEQERIGRLVDRLENMRKNVAGDGVNRCILCGEQLGMLGSTCVVCEDCKKNVCTKCGVETSNNRPHSVWLCKICIEQREVWKRSGAWFFKGFPKQVLPQPMPIKKTKPQQPVSEPTAPEQPTPEPKHPTRAPTRGDTEDRRGPSQKAAPDLASAPGRGSYGPPVRRASEARMSSSGRDSESWDQSHSGAASDPSRSPAGLRRANSVQASRPAPTSMQSPAPPQPGQTGPPGGSRPTPGPGGRFPDQKPEVAPSDPGYTGATAPPREERTGGIGGYTAVGAREDRVGHPSGPYSQASAALQPAVAPSRQPPPPEEEEEEANSYDSDEATTLGALEFSLLYDQDNSSLNCTIIKAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPIWNETLVYHGITDEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKPNQRKNFNICLERVIPMKRAGTTGSARGMALYEEEQVERIGDIEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNENHVSSD", "length": 703, "header": "tr|A0A5G2QAK6-1|A0A5G2QAK6_PIG Isoform 1 of Rabphilin-3A OS=Sus scrofa OX=9823 GN=RPH3A PE=1 SV=1 CANONICAL=A0A5G2QAK6-1" }, "isoforms": [ { "isoform_ac": "A0A287AX24-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AX24/entry", "sequence": { "sequence": "MTDTVFSNSSSRWMCPSDRPLQSKLQTGWSVHPSGQPDRQRKQEELTDEEKEIINRVIARAEKMEEMEQERIGRLVDRLENMRKNVAGDGVNRCILCGEQLGMLGSTCVVCEDCKKNVCTKCGVETSNNRPHSVWLCKICIEQREVWKRSGAWFFKGFPKQVLPQPMPIKKTKPQQPVSEPTAPEQPTPEPKHPTRAPTRGDTEDRRGPSQKAAPDLASAPGRGSYGPPVRRASEARMSSSGRDSESWDQSHSGAASDPSRSPAGLRRANSVQASRPAPTSMQSPAPPQPGQTGPPGGSRPTPGPGGRFPDQKPEVAPSDPGYTGATAPPREERTGGIGGYTAVGAREDRVGHPSGPYSQASAALQPAVAPSRQPPPPEEEEEEANSYDSDEATTLGALEFSLLYDQDNSSLNCTIIKAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPIWNETLVYHGITDEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKPNQRKNFNICLERVIPMKRAGTTGSARGMALYEEEQVERIGDIEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNENHVSSD", "length": 697, "header": "tr|A0A287AX24-1|A0A5G2QAK6_PIG Computationally mapped isoform of Rabphilin-3A OS=Sus scrofa OX=9823 GN=RPH3A PE=1 SV=3 CANONICAL=A0A5G2QAK6-1" }, "locus": { "chromosome": "14", "start_pos": 38933721, "end_pos": 38869051, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041928.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041928.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000048701.3", "url": "https://www.ensembl.org/id/ENSSSCP00000048701.3" } ] } }, { "isoform_ac": "A0A480E5D8-1", "url": "https://www.uniprot.org/uniprotkb/A0A480E5D8/entry", "sequence": { "sequence": "MTDTVFSNSSSRWMCPSDRPLQSNDKEQLQTGWSVHPSGQPDRQRKQEELTDEEKEIINRVIARAEKMEEMEQERIGRLVDRLENMRKNVAGDGVNRCILCGEQLGMLGSTCVVCEDCKKNVCTKCGVETSNNRPHSVWLCKICIEQREVWKRSGAWFFKGFPKQVLPQPMPIKKTKPQQPVSEPTAPEQPTPEPKHPTRAPTRGDTEDRRGPSQKAAPDLASAPGRGSYGPPVRRASEARMSSSGRDSESWDQSHSGAASDPSRSPAGLRRANSVQASRPAPTSMQSPAPPQPGQTGPPGGSRPTPGPGGRFPDQKPEVAPSDPGYTGATAPPREERTGGIGGYTAVGAREDRVGHPSGPYSQASAALQPAVAPSRQPPPPEEEEEEANSYDSDEATTLGALEFSLLYDQDNSSLNCTIIKAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPIWNETLVYHGITDEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKPNQRKNFNICLERVIPMKRAGTTGSARGMALYEEEQVERIGDIEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNENHVSSD", "length": 701, "header": "tr|A0A480E5D8-1|A0A5G2QAK6_PIG Computationally mapped isoform of Rabphilin-3A OS=Sus scrofa OX=9823 GN=RPH3A PE=1 SV=1 CANONICAL=A0A5G2QAK6-1" }, "locus": { "chromosome": "14", "start_pos": 38933721, "end_pos": 38869051, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000010833.5", "url": "https://www.ensembl.org/id/ENSSSCT00000010833.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000010550.5", "url": "https://www.ensembl.org/id/ENSSSCP00000010550.5" } ] } }, { "isoform_ac": "A0A4X1TH12-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TH12/entry", "sequence": { "sequence": "MTDTVFSNSSSRWMCPSDRPLQSNDKEQRLVDRLENMRKNVAGDGVNRCILCGEQLGMLGSTCVVCEDCKKNVCTKCGVETSNNRPHSVWLCKICIEQREVWKRSGAWFFKGFPKQVLPQPMPIKKTKPQQPVSEPTAPEQPTPEPKHPTRAPTRGDTEDRRGPSQKAAPDLASAPGRGSYGPPVRRASEARMSSSGRDSESWDQSHSGAASDPSRSPAGLRRANSVQASRPAPTSMQSPAPPQPGQTGPPGGSRPTPGPGGRFPDQKPEVAPSDPGYTGATAPPREERTGGIGGYTAVGAREDRVGHPSGPYSQASAALQPAVAPSRQPPPPEEEEEEANSYDSDEATTLGALEFSLLYDQDNSSLNCTIIKAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPIWNETLVYHGITDEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKPNQRKNFNICLERVIPMKRAGTTGSARGMALYEEEQVERIGDIEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNENHVSSD", "length": 652, "header": "tr|A0A4X1TH12-1|A0A4X1TH12_PIG Computationally mapped isoform of Rabphilin 3A OS=Sus scrofa OX=9823 GN=RPH3A PE=1 SV=1 CANONICAL=A0A5G2QAK6-1" }, "locus": { "chromosome": "14", "start_pos": 38933721, "end_pos": 38869051, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068653.1", "url": "https://www.ensembl.org/id/ENSSSCT00000068653.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067499.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067499.1" } ] } }, { "isoform_ac": "A0A5G2QAK6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6/entry", "sequence": { "sequence": "MTDTVFSNSSSRWMCPSDRPLQSNPKLPFRLQTGWSVHPSGQPDRQRKQEELTDEEKEIINRVIARAEKMEEMEQERIGRLVDRLENMRKNVAGDGVNRCILCGEQLGMLGSTCVVCEDCKKNVCTKCGVETSNNRPHSVWLCKICIEQREVWKRSGAWFFKGFPKQVLPQPMPIKKTKPQQPVSEPTAPEQPTPEPKHPTRAPTRGDTEDRRGPSQKAAPDLASAPGRGSYGPPVRRASEARMSSSGRDSESWDQSHSGAASDPSRSPAGLRRANSVQASRPAPTSMQSPAPPQPGQTGPPGGSRPTPGPGGRFPDQKPEVAPSDPGYTGATAPPREERTGGIGGYTAVGAREDRVGHPSGPYSQASAALQPAVAPSRQPPPPEEEEEEANSYDSDEATTLGALEFSLLYDQDNSSLNCTIIKAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPIWNETLVYHGITDEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKPNQRKNFNICLERVIPMKRAGTTGSARGMALYEEEQVERIGDIEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNENHVSSD", "length": 703, "header": "tr|A0A5G2QAK6-1|A0A5G2QAK6_PIG Isoform 1 of Rabphilin-3A OS=Sus scrofa OX=9823 GN=RPH3A PE=1 SV=1 CANONICAL=A0A5G2QAK6-1" }, "locus": { "chromosome": "14", "start_pos": 38933721, "end_pos": 38869051, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067607.2", "url": "https://www.ensembl.org/id/ENSSSCT00000067607.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061427.2", "url": "https://www.ensembl.org/id/ENSSSCP00000061427.2" } ] } }, { "isoform_ac": "A0A5G2RDV2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RDV2/entry", "sequence": { "sequence": "MTDTVFSNSSSRWMCPSDRPLQSKLQTGWSVHPSGQPDRQRKQEELTDEEKEIINRVIARAEKMEEMEQERIGRLVDRLENMRKNVAGDGVNRCILCGEQLGMLGSTCVVCEDCKKILPESCNNCEKLHTGKKSEVKNCEPTAPEQPTPEPKHPTRAPTRGDTEDRRGPSQKAAPDLASAPGRGSYGPPVRRASEARMSSSGRDSESWDQSHSGAASDPSRSPAGLRRANSVQASRPAPTSMQSPAPPQPGQTGPPGGSRPTPGPGGRFPDQKPEVAPSDPGYTGATAPPREERTGGIGGYTAVGAREDRVGHPSGPYSQASAALQPAVAPSRQPPPPEEEEEEANSYDSDEATTLGALEFSLLYDQDNSSLNCTIIKAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPIWNETLVYHGITDEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKPNQRKNFNICLERVIPMKRAGTTGSARGMALYEEEQVERIGDIEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNENHVSSD", "length": 657, "header": "tr|A0A5G2RDV2-1|A0A5G2QAK6_PIG Computationally mapped isoform of Rabphilin-3A OS=Sus scrofa OX=9823 GN=RPH3A PE=1 SV=1 CANONICAL=A0A5G2QAK6-1" }, "locus": { "chromosome": "14", "start_pos": 38933721, "end_pos": 38869051, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000086335.2", "url": "https://www.ensembl.org/id/ENSSSCT00000086335.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072660.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072660.1" } ] } }, { "isoform_ac": "A0A8D1AYD2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1AYD2/entry", "sequence": { "sequence": "HEDGEQRLVDRLENMRKNVAGDGVNRCILCGEQLGMLGSTCVVCEDCKKILPESCNNCEKLHTGKKSEVKNCEPTAPEQPTPEPKHPTRAPTRGDTEDRRGPSQKAAPDLASAPGRGSYGPPVRRASEARMSSSGRDSESWDQSHSGAASDPSRSPAGLRRANSVQASRPAPTSMQSPAPPQPGQTGPPGGSRPTPGPGGRFPDQKPEVAPSDPGYTGATAPPREERTGGIGGYTAVGAREDRVGHPSGPYSQASAALQPAVAPSRQPPPPEEEEEEANSYDSDEATTLGALEFSLLYDQDNSSLNCTIIKAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPIWNETLVYHGITDEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKPNQRKNFNICLERVIPMKRAGTTGSARGMALYEEEQVERIGDIEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNENHVSSD", "length": 590, "header": "tr|A0A8D1AYD2-1|A0A5G2QAK6_PIG Computationally mapped isoform of Rabphilin-3A OS=Sus scrofa OX=9823 GN=RPH3A PE=1 SV=1 CANONICAL=A0A5G2QAK6-1" }, "locus": { "chromosome": "14", "start_pos": 38902890, "end_pos": 38869051, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069844.1", "url": "https://www.ensembl.org/id/ENSSSCT00000069844.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066298.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066298.1" } ] } }, { "isoform_ac": "A0A8W4F785-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F785/entry", "sequence": { "sequence": "MTDTVFSNSSSRWMCPSDRPLQSKLQTGWSVHPSGQPDRQRKQEELTDEEKEIINRVIARAEKMEEMEQERIGRLVDRLENMRKNVAGDGVNRCILCGEQLGMLGSTCVVCEDCKKILPESCNNCEKLHTGKKSVLPIVEPTAPEQPTPEPKHPTRAPTRGDTEDRRGPSQKAAPDLASAPGRGSYGPPVRRASEARMSSSGRDSESWDQSHSGAASDPSRSPAGLRRANSVQASRPAPTSMQSPAPPQPGQTGPPGGSRPTPGPGGRFPDQKPEVAPSDPGYTGATAPPREERTGGIGGYTAVGAREDRVGHPSGPYSQASAALQPAVAPSRQPPPPEEEEEEANSYDSDEATTLGALEFSLLYDQDNSSLNCTIIKAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPIWNETLVYHGITDEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKPNQRKNFNICLERVIPMKRAGTTGSARGMALYEEEQVERIGDIEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNENHVSSD", "length": 657, "header": "tr|A0A8W4F785-1|A0A5G2QAK6_PIG Computationally mapped isoform of Rabphilin-3A OS=Sus scrofa OX=9823 GN=RPH3A PE=1 SV=1 CANONICAL=A0A5G2QAK6-1" }, "locus": { "chromosome": "14", "start_pos": 38933721, "end_pos": 38869051, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091883.1", "url": "https://www.ensembl.org/id/ENSSSCT00000091883.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075106.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075106.1" } ] } }, { "isoform_ac": "A0A8W4FL15-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FL15/entry", "sequence": { "sequence": "MTDTVFSNSSSRWMCPSDRPLQSKRLVDRLENMRKNVAGDGVNRCILCGEQLGMLGSTCVVCEDCKKILPESCNNCEKLHTGKKSEVKNCEPTAPEQPTPEPKHPTRAPTRGDTEDRRGPSQKAAPDLASAPGRGSYGPPVRRASEARMSSSGRDSESWDQSHSGAASDPSRSPAGLRRANSVQASRPAPTSMQSPAPPQPGQTGPPGGSRPTPGPGGRFPDQKPEVAPSDPGYTGATAPPREERTGGIGGYTAVGAREDRVGHPSGPYSQASAALQPAVAPSRQPPPPEEEEEEANSYDSDEATTLGALEFSLLYDQDNSSLNCTIIKAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPIWNETLVYHGITDEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKPNQRKNFNICLERVIPMKRAGTTGSARGMALYEEEQVERIGDIEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNENHVSSD", "length": 608, "header": "tr|A0A8W4FL15-1|A0A5G2QAK6_PIG Computationally mapped isoform of Rabphilin-3A OS=Sus scrofa OX=9823 GN=RPH3A PE=1 SV=1 CANONICAL=A0A5G2QAK6-1" }, "locus": { "chromosome": "14", "start_pos": 38933721, "end_pos": 38869051, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000095389.1", "url": "https://www.ensembl.org/id/ENSSSCT00000095389.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079897.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079897.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 308, "start_aa": "Thr", "end_pos": 308, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr308", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2RDV2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RDV2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100736858", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100736858", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "intracellular protein transport", "id": "GO:0006886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006886", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAK6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6" } ], "pmid": "" }, { "name": "positive regulation of calcium ion-dependent exocytosis", "id": "GO:0045956", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045956", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAK6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6" } ], "pmid": "" }, { "name": "synaptic vesicle priming", "id": "GO:0016082", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016082", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAK6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6" } ], "pmid": "" }, { "name": "calcium-dependent activation of synaptic vesicle fusion", "id": "GO:0099502", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099502", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAK6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAK6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6" } ], "pmid": "" }, { "name": "lipid binding", "id": "GO:0008289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008289", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAK6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6" } ], "pmid": "" }, { "name": "small GTPase binding", "id": "GO:0031267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031267", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAK6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAK6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 8, "go_terms": [ { "name": "dendritic spine", "id": "GO:0043197", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043197", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAK6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6" } ], "pmid": "" }, { "name": "postsynaptic membrane", "id": "GO:0045211", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045211", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAK6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6" } ], "pmid": "" }, { "name": "synaptic vesicle membrane", "id": "GO:0030672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030672", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAK6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAK6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6" } ], "pmid": "" }, { "name": "synapse", "id": "GO:0045202", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045202", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAK6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6" } ], "pmid": "" }, { "name": "extrinsic component of synaptic vesicle membrane", "id": "GO:0098850", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098850", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAK6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6" } ], "pmid": "" }, { "name": "neuron projection", "id": "GO:0043005", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043005", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAK6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6" } ], "pmid": "" }, { "name": "transport vesicle membrane", "id": "GO:0030658", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030658", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAK6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 415, "end_pos": 417, "annotation": "n_glycosylation_sequon" }, { "start_pos": 419, "end_pos": 421, "annotation": "n_glycosylation_sequon" }, { "start_pos": 469, "end_pos": 471, "annotation": "n_glycosylation_sequon" }, { "start_pos": 8, "end_pos": 10, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QAK6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAK6" }, { "id": "PS50004", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50004" } ], "ann_type": "Domain_Extent_Annotation", 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"sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1VVL0-1", "uniprot_ac": "A0A4X1VVL0", "uniprot_id": "A0A4X1VVL0_PIG", "mass": { "chemical_mass": 57553.0, "monoisotopic_mass": 57553.0 }, "refseq": { "ac": "XP_003123698", "name": "dual specificity protein kinase CLK4 isoform X3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123698" }, "gene_names": [ { "name": "CLK4", "type": "recommended", "evidence": [ { "id": "A0A4X1VVL0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVL0" } ] }, { "name": "CLK4", "type": "synonym", "evidence": [ { "id": "XP_003123698", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123698" } ] } ], "protein_names": [ { "name": "dual-specificity kinase", "type": "recommended", "evidence": [ { "id": "A0A4X1VVL0", "database": "UniProtKB", "url": 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79693669, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000014028", "url": "https://www.ensembl.org/id/ENSSSCG00000014028" } ] } } ], "crossref": [ { "id": "A0A4X1VVL0", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VVL0", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd14213", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd14213", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100521252", "url": "https://www.ncbi.nlm.nih.gov/gene/100521252", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000719", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000719", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008271", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008271", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011009", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011009", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017441", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017441", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051175", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051175", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100521252", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521252", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NFRCVQM", "url": "https://omabrowser.org/oma/group/NFRCVQM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A480MVP3", "url": "https://www.orthodb.org/?gene=A0A480MVP3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A480XJK5", "url": "https://www.orthodb.org/?gene=A0A480XJK5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VVL0", "url": "https://www.orthodb.org/?gene=A0A4X1VVL0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR45646", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45646", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45646:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45646:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00069", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00069", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003123698", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123698", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A480MVP3", "url": "https://www.uniprot.org/uniprotkb/A0A480MVP3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A480MVP3-1", "url": "https://www.uniprot.org/uniprotkb/A0A480MVP3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A480XJK5", "url": "https://www.uniprot.org/uniprotkb/A0A480XJK5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A480XJK5-1", "url": "https://www.uniprot.org/uniprotkb/A0A480XJK5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VVL0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVL0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VVL0-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVL0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1EP36", "url": "https://www.uniprot.org/uniprotkb/A0A8D1EP36", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1EP36-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1EP36-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRHSKRTHCPDWDSRESWGHESYSGSHKRKRRSHSSTQENRHCKPHHQFKESDCHYLEARSLNERDYRDRRYIDEYRNDYCERYVPRHYHRDIESSYRIHCSKSSVRSRRSSLKRKRNRHCSSHQSRSKSHRRKRSRSIEDDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGMHVAVKIVKNVGRYREAARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQIDHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYVVKYNSKMKRDERTLKNTDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAMMERILGPIPTHMIQKTRKRKYFHHNQLDWDEHSSAGRYVRRRCKPLKEFMLCHDEEHEKLFDLVRRMLEYDPVKRITLDEALQHPFFDLLKKK", "length": 481, "header": "tr|A0A4X1VVL0-1|A0A4X1VVL0_PIG Isoform 1 of dual-specificity kinase OS=Sus scrofa OX=9823 GN=CLK4 PE=3 SV=1 CANONICAL=A0A4X1VVL0-1" }, "isoforms": [ { "isoform_ac": "A0A480MVP3-1", "url": "https://www.uniprot.org/uniprotkb/A0A480MVP3/entry", "sequence": { "sequence": "MKATVEVTNGRGDPTVVHKRTDIVNHITSLKNLIDVPLGLFARLLSKLASWGYFKKHHYLEARSLNERDYRDRRYIDEYRNDYCERYVPRHYHRDIESSYRIHCSKSSVRSRRSSLKRKRNRHCSSHQSRSKSHRRKRSRSIEDDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGMHVAVKIVKNVGRYREAARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQIDHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYVVKYNSKMKRDERTLKNTDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAMMERILGPIPTHMIQKTRKRKYFHHNQLDWDEHSSAGRYVRRRCKPLKEFMLCHDEEHEKLFDLVRRMLEYDPVKRITLDEALQHPFFDLLKKK", "length": 484, "header": "tr|A0A480MVP3-1|A0A4X1VVL0_PIG Computationally mapped isoform of dual-specificity kinase OS=Sus scrofa OX=9823 GN=CLK4 PE=3 SV=1 CANONICAL=A0A4X1VVL0-1" }, "locus": { "chromosome": "2", "start_pos": 79752368, "end_pos": 79732718, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000104207.1", "url": "https://www.ensembl.org/id/ENSSSCT00000104207.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074690.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074690.1" } ] } }, { "isoform_ac": "A0A480XJK5-1", "url": "https://www.uniprot.org/uniprotkb/A0A480XJK5/entry", "sequence": { "sequence": "MMRHSKRTHCPDWDSRESWGHESYSGSHKRKRRSHSSTQENRHCKPHHQFKESDCHYLEARSLNERDYRDRRYIDEYRNDYCERYVPRHYHRDIESSYRIHCSKSSVRSRRSSLKRKRNRHCSSHQSRSKSHRRKRSRSIEDDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGMHVAVKIVKNVGRYREAARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQIDHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYVVKYNSKMKRDERTLKNTDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAMMERILGPIPTHMIQKTRKRKYFHHNQLDWDEHSSAGRYVRRRCKPLKEFMLCHDEEHEKLFDLVRRMLEYDPVKRITLDEALQHPFFDLLKKK", "length": 482, "header": "tr|A0A480XJK5-1|A0A4X1VVL0_PIG Computationally mapped isoform of dual-specificity kinase OS=Sus scrofa OX=9823 GN=CLK4 PE=3 SV=1 CANONICAL=A0A4X1VVL0-1" }, "locus": { "chromosome": "2", "start_pos": 79752368, "end_pos": 79729781, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000099421.1", "url": "https://www.ensembl.org/id/ENSSSCT00000099421.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076192.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076192.1" } ] } }, { "isoform_ac": "A0A4X1VVL0-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVL0/entry", "sequence": { "sequence": "MRHSKRTHCPDWDSRESWGHESYSGSHKRKRRSHSSTQENRHCKPHHQFKESDCHYLEARSLNERDYRDRRYIDEYRNDYCERYVPRHYHRDIESSYRIHCSKSSVRSRRSSLKRKRNRHCSSHQSRSKSHRRKRSRSIEDDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGMHVAVKIVKNVGRYREAARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQIDHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYVVKYNSKMKRDERTLKNTDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAMMERILGPIPTHMIQKTRKRKYFHHNQLDWDEHSSAGRYVRRRCKPLKEFMLCHDEEHEKLFDLVRRMLEYDPVKRITLDEALQHPFFDLLKKK", "length": 481, "header": "tr|A0A4X1VVL0-1|A0A4X1VVL0_PIG Isoform 1 of dual-specificity kinase OS=Sus scrofa OX=9823 GN=CLK4 PE=3 SV=1 CANONICAL=A0A4X1VVL0-1" }, "locus": { "chromosome": "2", "start_pos": 79752368, "end_pos": 79732660, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039001.3", "url": "https://www.ensembl.org/id/ENSSSCT00000039001.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053945.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053945.2" } ] } }, { "isoform_ac": "A0A8D1EP36-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1EP36/entry", "sequence": { "sequence": "MCIPLEASHSVEEDTHPSHYLEARSLNERDYRDRRYIDEYRNDYCERYVPRHYHRDIESSYRIHCSKSSVRSRRSSLKRKRNRHCSSHQSRSKSHRRKRSRSIEDDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGMHVAVKIVKNVGRYREAARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQIDHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYVVKYNSKMKRDERTLKNTDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAMMERILGPIPTHMIQKTRKRKYFHHNQLDWDEHSSAGRYVRRRCKPLKEFMLCHDEEHEKLFDLVRRMLEYDPVKRITLDEALQHPFFDLLKKK", "length": 445, "header": "tr|A0A8D1EP36-1|A0A4X1VVL0_PIG Computationally mapped isoform of dual-specificity kinase OS=Sus scrofa OX=9823 GN=CLK4 PE=3 SV=1 CANONICAL=A0A4X1VVL0-1" }, "locus": { "chromosome": "2", "start_pos": 79752368, "end_pos": 79736217, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000015323.4", "url": "https://www.ensembl.org/id/ENSSSCT00000015323.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014915.4", "url": "https://www.ensembl.org/id/ENSSSCP00000014915.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D1EP36", "url": "https://www.uniprot.org/uniprotkb/A0A8D1EP36" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100521252", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521252", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I5ZNT1-1", "protein_name": "dual-specificity kinase", "gene_name": "Clk4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRHSKRTHCPDWDSRESWGHESYSGSHKRKRRSHSSTQENRHCKPHHQFKDTDCHYLEARCLNERDYRDRRYIDEYRNDYCEGYVPRHYHRDIESTYRIHCSKSSVRSRRSSPKRKRNRHCASHQSHSKSHRRKRSRSIEDDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGLHVAVKIVKNVGRYREAARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQIDHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYVVKYNSKMKRDERTLKNTDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAMMERILGPIPAHMIQKTRKRKYFHHNQLDWDEHSSAGRYVRRRCKPLKEFMLCHDEEHEKLFDLVRRMLEYDPTKRITLDEALQHPFFDLLKGK", "length": 481 }, "evidence": [ { "id": "A0A4X1VVL0", "url": "https://omabrowser.org/oma/group/A0A4X1VVL0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A9J7K0H2-1", "protein_name": "dual-specificity kinase", "gene_name": "Clk4", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKATVEATSGRGDRTVVHKRTGIVNHIISLKILIDVPLGLFTRLLSKLASWGYFKKHHYLEARCLNGRDYRDRRYIDEYRNDYCEGYVPRHYHRDIESSYRIHCSKSSVRSRRSSPKRKRNRHCASHQSHSKSHRRKRSRSIEDDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGLHVAVKIVKNVGRYREAARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQIDHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYVVKYNSKMKRDERTLKNTDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAMMERILGPIPAHMIQKTRKRKYFHHNQLDWDEHSSAGRYVRRRCKPLKEFMLCHDEEHEKLFDLVRRMLEYDPAKRITLDEALQHPFFDLLKRK", "length": 484 }, "evidence": [ { "id": "A0A4X1VVL0", "url": "https://omabrowser.org/oma/group/A0A4X1VVL0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "E1B9M6-1", "protein_name": "dual-specificity kinase", "gene_name": "CLK4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": 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"https://www.uniprot.org/uniprotkb/A0A4X1VVL0" } ], "pmid": "" }, { "name": "protein tyrosine kinase activity", "id": "GO:0004713", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004713", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VVL0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVL0" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VVL0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVL0" } ], "pmid": "" }, { "name": "protein serine/threonine/tyrosine kinase activity", "id": "GO:0004712", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004712", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VVL0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVL0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VVL0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVL0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "regulation of RNA splicing", "id": "GO:0043484", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043484", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VVL0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVL0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 212, "end_pos": 214, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1VVL0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVL0" }, { "id": "PS50011", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50011" } ], "ann_type": "Domain_Extent_Annotation", 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"count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1W7C3-1", "uniprot_ac": "A0A4X1W7C3", "uniprot_id": "A0A4X1W7C3_PIG", "mass": { "chemical_mass": 15940.0, "monoisotopic_mass": 15940.0 }, "refseq": {}, "gene_names": [ { "name": "FKBP11", "type": "recommended", "evidence": [ { "id": "A0A4X1W7C3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7C3" } ] } ], "protein_names": [ { "name": "peptidylprolyl isomerase", "type": "recommended", "evidence": [ { "id": "A0A4X1W7C3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7C3/entry#names_and_taxonomy" } ] }, { "name": "5.2.1.8", "type": "synonym", "evidence": [ { "id": "A0A4X1W7C3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7C3/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "PPIases accelerate the folding of proteins during protein synthesis.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W7C3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7C3#function" }, { "database": "UniProtKB", "id": "ARBA00055986", "url": "https://www.uniprot.org/uniprotkb/ARBA00055986#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W7C3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7C3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "FKBP11", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7C3", "locus": { "chromosome": "5", "start_pos": 14961518, "end_pos": 14963546, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000059895", "url": "https://www.ensembl.org/id/ENSSSCG00000059895" } ] } } ], "crossref": [ { "id": "A0A4X1W7C3", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1W7C3", "database": "AlphaFoldDB", "categories": [] }, { "id": "IPR001179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044609", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044609", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046357", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046357", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR45779", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45779", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45779:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45779:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00254", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00254", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "16237", "url": "https://www.rhea-db.org/rhea/16237", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1W7C3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7C3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W7C3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7C3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTLRPSFLPLRLLLLLLLSGAMCRAEAGFETESPVRTLQVETLVEPPEPCAEPAAFGDTLHIHYSGSLVDGRIFDTSLSRDPLVIELGQKQVIPGLEQSLLDMCVGEKRRVIIPSHLAYGKRGFPPSIPGTRDNLLKPPGLPFGNQ", "length": 146, "header": "tr|A0A4X1W7C3-1|A0A4X1W7C3_PIG Isoform 1 of peptidylprolyl isomerase OS=Sus scrofa OX=9823 GN=FKBP11 PE=1 SV=1 CANONICAL=A0A4X1W7C3-1" }, "isoforms": [ { "isoform_ac": "A0A4X1W7C3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7C3/entry", "sequence": { "sequence": "MTLRPSFLPLRLLLLLLLSGAMCRAEAGFETESPVRTLQVETLVEPPEPCAEPAAFGDTLHIHYSGSLVDGRIFDTSLSRDPLVIELGQKQVIPGLEQSLLDMCVGEKRRVIIPSHLAYGKRGFPPSIPGTRDNLLKPPGLPFGNQ", "length": 146, "header": "tr|A0A4X1W7C3-1|A0A4X1W7C3_PIG Isoform 1 of peptidylprolyl isomerase OS=Sus scrofa OX=9823 GN=FKBP11 PE=1 SV=1 CANONICAL=A0A4X1W7C3-1" }, "locus": { "chromosome": "5", "start_pos": 14963456, "end_pos": 14961521, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000086420.2", "url": "https://www.ensembl.org/id/ENSSSCT00000086420.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073463.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073463.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W7C3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7C3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W7C3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7C3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "peptidyl-prolyl cis-trans isomerase activity", "id": "GO:0003755", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003755", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W7C3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7C3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "16237", "name": "", "equation": "[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "16237", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/16237" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1W7C3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7C3" }, { "id": "PS50059", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50059" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PPIase FKBP-type", "eco_id": "ECO_0000259", "start_pos": 57, "end_pos": 129, "start_aa": "Gly", "end_aa": "Pro", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QCK5-1", "uniprot_ac": "A0A5G2QCK5", "uniprot_id": "A0A5G2QCK5_PIG", "mass": { "chemical_mass": 89540.0, "monoisotopic_mass": 89540.0 }, "refseq": {}, "gene_names": [ { "name": "ELP2", "type": "recommended", "evidence": [ { "id": "A0A5G2QCK5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCK5" } ] } ], "protein_names": [ { "name": "Elongator complex protein 2", "type": "recommended", "evidence": [ { "id": "A0A5G2QCK5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCK5/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCK5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCK5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ELP2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCK5", "locus": { "chromosome": "6", "start_pos": 119932123, "end_pos": 119885463, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000020898", "url": "https://www.ensembl.org/id/ENSSSCG00000020898" } ] } } ], "crossref": [ { "id": "A0A5G2QCK5", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QCK5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000020898", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000020898", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00200", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00200", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100621519", "url": "https://www.ncbi.nlm.nih.gov/gene/100621519", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001680", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001680", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015943", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015943", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036322", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036322", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037289", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037289", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100621519", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621519", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ENFRHIS", "url": "https://omabrowser.org/oma/group/ENFRHIS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3L616", "url": "https://www.orthodb.org/?gene=I3L616", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR44111", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44111", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44111:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44111:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00400", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00400", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QCK5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCK5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QCK5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCK5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QGA3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGA3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QGA3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGA3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QQZ8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQZ8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QQZ8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQZ8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QWI3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWI3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QWI3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWI3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L616", "url": "https://www.uniprot.org/uniprotkb/I3L616", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L616-1", "url": "https://www.uniprot.org/uniprotkb/I3L616-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVAPVLETSHVFCCPNRVRGALSWSSGPGGLLAFGTSCSVVLYDPQKRVVITNLNGHTARVNCLQWICKQNGSPSTELVSGGSDNQVIHWEIENNQLLKAVHLPGHEGPIYAVHAVYQKRASDTAFRTLIVSAASDSTVRVWSKQGFEVPILACGDDDCKIHLFVQQNDQFQNVLFLSGHEDWIRGVEWAAFGRDLFLATCSQDCLIRIWKLYIKSVSFETQEDDHIRLKENTFAIENESNKIAFAVTLETVLAGHENWVNAVHWQPPFYKDGVLQQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYDCQFNEDGSMIIAHAFHGALHLWKQNATNLREWVPEIVISGHFDGVQDLTWDPEGEFIITVGTDQTTRLFAPWKRKDQSQVTWHEIARPQIHGYDLKCLAMISRFQFVSGADEKVLRVFSAPRNFVENFCIITGQSLNHVLGNQEGDLPEGATVPALGLSNKAVFQGDVASQPSDEEELLSGSGFEYQQVAFQPSILTEPPTEDHLLQNTLWPEVQKLYGHGYEIFCVACNNSKTLLASACKAAKKEHAAIILWNTTSWKQVQNLVFHSLTVTQMAFSPDDKFLLAVSRDRTWSLWKRQDTIPPELDPVFSLFAFTNKVTAVHSRIIWSCDWSPDGKYFFTGSRDKKVVAWGECDSGDDSIEHSIGPCSSVLDVGGAVTAVSVCPVLNLSQRYIVAVGLECGKISLYSWKKTNQVPEINDWIHCVKTSQSQSHTLAIKKLCWKNCNGKTEQNEAEGTEWLHFASCGEDHTVKIHRVNRYAL", "length": 800, "header": "tr|A0A5G2QCK5-1|A0A5G2QCK5_PIG Isoform 1 of Elongator complex protein 2 OS=Sus scrofa OX=9823 GN=ELP2 PE=1 SV=1 CANONICAL=A0A5G2QCK5-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QCK5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCK5/entry", "sequence": { "sequence": "MVAPVLETSHVFCCPNRVRGALSWSSGPGGLLAFGTSCSVVLYDPQKRVVITNLNGHTARVNCLQWICKQNGSPSTELVSGGSDNQVIHWEIENNQLLKAVHLPGHEGPIYAVHAVYQKRASDTAFRTLIVSAASDSTVRVWSKQGFEVPILACGDDDCKIHLFVQQNDQFQNVLFLSGHEDWIRGVEWAAFGRDLFLATCSQDCLIRIWKLYIKSVSFETQEDDHIRLKENTFAIENESNKIAFAVTLETVLAGHENWVNAVHWQPPFYKDGVLQQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYDCQFNEDGSMIIAHAFHGALHLWKQNATNLREWVPEIVISGHFDGVQDLTWDPEGEFIITVGTDQTTRLFAPWKRKDQSQVTWHEIARPQIHGYDLKCLAMISRFQFVSGADEKVLRVFSAPRNFVENFCIITGQSLNHVLGNQEGDLPEGATVPALGLSNKAVFQGDVASQPSDEEELLSGSGFEYQQVAFQPSILTEPPTEDHLLQNTLWPEVQKLYGHGYEIFCVACNNSKTLLASACKAAKKEHAAIILWNTTSWKQVQNLVFHSLTVTQMAFSPDDKFLLAVSRDRTWSLWKRQDTIPPELDPVFSLFAFTNKVTAVHSRIIWSCDWSPDGKYFFTGSRDKKVVAWGECDSGDDSIEHSIGPCSSVLDVGGAVTAVSVCPVLNLSQRYIVAVGLECGKISLYSWKKTNQVPEINDWIHCVKTSQSQSHTLAIKKLCWKNCNGKTEQNEAEGTEWLHFASCGEDHTVKIHRVNRYAL", "length": 800, "header": "tr|A0A5G2QCK5-1|A0A5G2QCK5_PIG Isoform 1 of Elongator complex protein 2 OS=Sus scrofa OX=9823 GN=ELP2 PE=1 SV=1 CANONICAL=A0A5G2QCK5-1" }, "locus": { "chromosome": "6", "start_pos": 119931716, "end_pos": 119885967, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087800.1", "url": "https://www.ensembl.org/id/ENSSSCT00000087800.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061291.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061291.1" } ] } }, { "isoform_ac": "A0A5G2QGA3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGA3/entry", "sequence": { "sequence": "MVAPVLETSHVFCCPNRVRGALSWSSGPGGLLAFGTSCSVVLYDPQKRVVITNLNGHTARVNCLQWICKQNGSPSTELVSGGSDNQVIHWEIENNQLLKAVHLPGHEGPIYAVHAVYQKRASDTAFRTLIVSAASDSTVRVWSKQGFEVTCLQTLNFGNGFTLALCLSFLPDTDVPILACGDDDCKIHLFVQQNDQFQNVLFLSGHEDWIRGVEWAAFGRDLFLATCSQDCLIRIWKLYIKSVSFETQEDDHIRLKENTFAIENESNKIAFAVTLETVLAGHENWVNAVHWQPPFYKDGVLQQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYDCQFNEDGSMIIAHAFHGALHLWKQNATNLREWVPEIVISGHFDGVQDLTWDPEGEFIITVGTDQTTRLFAPWKRKDQSQVTWHEIARPQIHGYDLKCLAMISRFQFVSGADEKVLRVFSAPRNFVENFCIITGQSLNHVLGNQEGDLPEGATVPALGLSNKAVFQGDVASQPSDEEELLSGSGFEYQQVAFQPSILTEPPTEDHLLQNTLWPEVQKLYGHGYEIFCVACNNSKTLLASACKAAKKEHAAIILWNTTSWKQVQNLVFHSLTVTQMAFSPDDKFLLAVSRDRTWSLWKRQDTIPPELDPVFSLFAFTNKVTAVHSRIIWSCDWSPDGKYFFTGSRDKKVVAWGECDSGDDSIEHSIGPCSSVLDVGGAVTAVSVCPVLNLSQRQSHTLAIKKLCWKNCNGKTEQNEAEGTEWLHFASCGEDHTVKIHRVNRYAL", "length": 788, "header": "tr|A0A5G2QGA3-1|A0A5G2QGA3_PIG Computationally mapped isoform of Elongator complex protein 2 OS=Sus scrofa OX=9823 GN=ELP2 PE=1 SV=1 CANONICAL=A0A5G2QCK5-1" }, "locus": { "chromosome": "6", "start_pos": 119931716, "end_pos": 119885967, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090630.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090630.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062816.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062816.1" } ] } }, { "isoform_ac": "A0A5G2QQZ8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQZ8/entry", "sequence": { "sequence": "MVAPVLETSHVFCCPNRVRGALSWSSGPGGLLAFGTSCSVVLYDPQKRVVITNLNGHTARVNCLQWICKQNGSPSTELVSGGSDNQVIHWEIENNQLLKAVHLPGHEGPIYAVHAVYQKRASDTAFRTLIVSAASDSTVRVWSKQGFEVTCLQTLNFGNGFTLALCLSFLPDTDVPILACGDDDCKIHLFVQQNDQFQNVLFLSGHEDWIRGVEWAAFGRDLFLATCSQDCLIRIWKLYIKSVSFETQEDDHIRLKENTFAIENESNKIAFAVTLETVLAGHENWVNAVHWQPPFYKDGVLQQPVRLLSASMDKTMILWAPDEESGVWLEQREWVPEIVISGHFDGVQDLTWDPEGEFIITVGTDQTTRLFAPWKRKDQSQVTWHEIARPQIHGYDLKCLAMISRFQFVSGADEKVLRVFSAPRNFVENFCIITGQSLNHVLGNQEGDLPEGATVPALGLSNKAVFQGDVASQPSDEEELLSGSGFEYQQVAFQPSILTEPPTEDHLLQNTLWPEVQKLYGHGYEIFCVACNNSKTLLASACKAAKKEHAAIILWNTTSWKQVQNLVFHSLTVTQMAFSPDDKFLLAVSRDRTWSLWKRQDTIPPELDPVFSLFAFTNKVTAVHSRIIWSCDWSPDGKYFFTGSRDKKVVAWGECDSGDDSIEHSIGPCSSVLDVGGAVTAVSVCPVLNLSQRYIVAVGLECGKISLYSWKKTNQVPEINDWIHCVKTSQSQSHTLAIKKLCWKNCNGKTEQNEAEGTEWLHFASCGEDHTVKIHRVNRYAL", "length": 782, "header": "tr|A0A5G2QQZ8-1|A0A5G2QCK5_PIG Computationally mapped isoform of Elongator complex protein 2 OS=Sus scrofa OX=9823 GN=ELP2 PE=1 SV=1 CANONICAL=A0A5G2QCK5-1" }, "locus": { "chromosome": "6", "start_pos": 119931716, "end_pos": 119885967, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069335.2", "url": "https://www.ensembl.org/id/ENSSSCT00000069335.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060704.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060704.1" } ] } }, { "isoform_ac": "A0A5G2QWI3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWI3/entry", "sequence": { "sequence": "MVAPVLETSHVFCCPNRVRGALSWSSGPGGLLAFGTSCSVVLYDPQKRVVITNLNGHTARVNCLQWICKQNGSPSTELVSGGSDNQVIHWEIENNQLLKAVHLPGHEGPIYAVHAVYQKRASDTAFRTLIVSAASDSTVRVWSKQGFEGRDLFLATCSQDCLIRIWKLYIKSVSFETQEDDHIRLKENTFAIENESNKIAFAVTLETVLAGHENWVNAVHWQPPFYKDGVLQQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYDCQFNEDGSMIIAHAFHGALHLWKQNATNLREWVPEIVISGHFDGVQDLTWDPEGEFIITVGTDQTTRLFAPWKRKDQSQVTWHEIARPQIHGYDLKCLAMISRFQFVSGADEKVLRVFSAPRNFVENFCIITGQSLNHVLGNQEGDLPEGATVPALGLSNKAVFQGDVASQPSDEEELLSGSGFEYQQVAFQPSILTEPPTEDHLLQNTLWPEVQKLYGHGYEIFCVACNNSKTLLASACKAAKKEHAAIILWNTTSWKQVQNLVFHSLTVTQMAFSPDDKFLLAVSRDRTWSLWKRQDTIPPELDPVFSLFAFTNKVTAVHSRIIWSCDWSPDGKYFFTGSRDKKVVAWGECDSGDDSIEHSIGPCSSVLDVGGAVTAVSVCPVLNLSQRYIVAVGLECGKISLYSWKKTNQVPEINDWIHCVKTSQSQSHTLAIKKLCWKNCNGKTEQNEAEGTEWLHFASCGEDHTVKIHRVNRYAL", "length": 756, "header": "tr|A0A5G2QWI3-1|A0A5G2QCK5_PIG Computationally mapped isoform of Elongator complex protein 2 OS=Sus scrofa OX=9823 GN=ELP2 PE=1 SV=1 CANONICAL=A0A5G2QCK5-1" }, "locus": { "chromosome": "6", "start_pos": 119931716, "end_pos": 119885967, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084423.1", "url": "https://www.ensembl.org/id/ENSSSCT00000084423.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069221.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069221.1" } ] } }, { "isoform_ac": "I3L616-1", "url": "https://www.uniprot.org/uniprotkb/I3L616/entry", "sequence": { "sequence": "MVAPVLETSHVFCCPNRVRGALSWSSGPGGLLAFGTSCSVVLYDPQKRVVITNLNGHTARVNCLQWICKQNGSPSTELVSGGSDNQVIHWEIENNQLLKAVHLPGHEGPIYAVHAVYQKRASDTAFRTLIVSAASDSTVRVWSKQGFEVTCLQTLNFGNGFTLALCLSFLPDTDVPILACGDDDCKIHLFVQQNDQFQNVLFLSGHEDWIRGVEWAAFGRDLFLATCSQDCLIRIWKLYIKSVSFETQEDDHIRLKENTFAIENESNKIAFAVTLETVLAGHENWVNAVHWQPPFYKDGVLQQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYDCQFNEDGSMIIAHAFHGALHLWKQNATNLREWVPEIVISGHFDGVQDLTWDPEGEFIITVGTDQTTRLFAPWKRKDQSQVTWHEIARPQIHGYDLKCLAMISRFQFVSGADEKVLRVFSAPRNFVENFCIITGQSLNHVLGNQEGDLPEGATVPALGLSNKAVFQGDVASQPSDEEELLSGSGFEYQQVAFQPSILTEPPTEDHLLQNTLWPEVQKLYGHGYEIFCVACNNSKTLLASACKAAKKEHAAIILWNTTSWKQVQNLVFHSLTVTQMAFSPDDKFLLAVSRDRTWSLWKRQDTIPPELDPVFSLFAFTNKVTAVHSRIIWSCDWSPDGKYFFTGSRDKKVVAWGECDSGDDSIEHSIGPCSSVLDVGGAVTAVSVCPVLNLSQRYIVAVGLECGKISLYSWKKTNQVPEINDWIHCVKTSQSQSHTLAIKKLCWKNCNGKTEQNEAEGTEWLHFASCGEDHTVKIHRVNRYAL", "length": 826, "header": "tr|I3L616-1|I3L616_PIG Computationally mapped isoform of Elongator complex protein 2 OS=Sus scrofa OX=9823 GN=ELP2 PE=1 SV=1 CANONICAL=A0A5G2QCK5-1" }, "locus": { "chromosome": "6", "start_pos": 119931716, "end_pos": 119885967, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026023.3", "url": "https://www.ensembl.org/id/ENSSSCT00000026023.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019467.1", "url": "https://www.ensembl.org/id/ENSSSCP00000019467.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QQZ8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQZ8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100621519", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621519", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0AAA9SPU1-1", "protein_name": "Elongator complex protein 2", "gene_name": "ELP2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVAPMLETSHVFCCPNRVRGALSWSPGPGGLLAFGTSCSVVLYDPQKRVVITNLNGHTARVNCLQWICKQDGSPSTELVSGGSDNQVIHWEIENNQLLQAVHVSGHEGPVYAVHAVYQRMAPGIALHTLIVSAASDSTVRVWSKQGSEVPVLACGDDDCKIHLFVQQNNQFQKMLFLSGHEDWIRGVEWAAFGRDLFLASCSQDCLIRIWRLYVKSTSLETQEDDDNIKLKENTFNVENESIKITFAVTLETVLAGHENWVNAVHWQPSFYKDGILQQPMRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYDCQFNEDGSMIIAHAFHGALHLWKQNATNPKEWTPEIVISGHFDGVQDLTWDPEGEFIITVGTDQTTRLFAPWKRKDQSQVTWHEIARPQIHGYDLKCLAMISRFQFVSGADEKVLRVFSAPRNFVENFCAITGQSMNHVLCDQDGDLPEGATVPALGLSNKAVFQGDMASQHSDEEELFSSAGFEYHQVAFQPSLLTEPPTEDHLLQNTLWPEVQKLYGHGYEIFCVACSNSKTLLASACKAAKKEHAAIILWNTASWKQVQNLIFHSLTVTQMAFSPDDKFLLAVSRDRTWSLWKRQDTIPPELDPVFSLFAFTNKVTAVHSRIIWSCDWSPDGKYFFTGSRDRKVVVWGECDSSDDAVEHSIGPCSSVLDVGGAVTAVSVCPVLNLSQRYVVAVGLECGKICLYSWEKTDQVPEINDWIRCVETSQSQSHTLAIKKLCWKNCNGKTEQNEGEGAEWLQFASCGEDHTVKIHRVNRCAL", "length": 801 }, "evidence": [ { "id": "A0A5G2QCK5", "url": "https://omabrowser.org/oma/group/A0A5G2QCK5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F4I1S7-1", "protein_name": "Elongator complex protein 2", "gene_name": "ELP2", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSENTKVEAKRVFIGAGCNRVVNNVSWGASGLVSFGAQNAVAVFCPKTAQILTTLPGHKASVNCTHWLPTSKFAFKAKKLDRQYLLSGDSDGIIILWELSTLNNDWRHVLQLPLSHKKGVTCITAYMVSETDAMFASASSDGVVNVWDVSFPSQPSEECKVVCLDSICVDTKAIVTLSLAELPQNPGRFALALGGLDNKIKLYSGERTGKFTSVCELKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIWKLVLVGDVGSWRREITLASYIEGPVFVSGTFTYQISVESVLIGHEDWVYSVEWQPPVIDFIDGRLVNHQPLSILSASMDKTMMIWRPEKKTGVWVNVVCVGELSHCALGFYGGHWSPNSLSILAHGYGGAFHLWRNVSSSKESENWQMQKVPSGHFAAVTDVTWARTGEYLLSVSQDQTTRVFSAWKNDEGNEAEDEHWHELARPQVHGHDINCVAMVQGKGNHRFVSGAEEKVVRVFEAPLSFLKTLNHTCAGGEGSFPEDLQADVQVLGANMSALGLSQKPIYLHSSSEPLERNGGGEGLDTFETVPEAAPAELKEPPIEDQLAFHTLWPESHKLYGHGNELFSLCSDHKGNLVASSCKAQSASMAEIWLWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWACSWNPFGHQFATSSRDKTVKIWSVENDARIKQILVLPPFGSSVTAVAWTGLDRNEKSGCVAVGMESGLIELSNVKIIETEEGTTATAALALRLEPFMCHVSAVNRLAWRPTEKCESNQSLRWLTSCGDDNCVRVFNFKF", "length": 838 }, "evidence": [ { "id": "A0A5G2QCK5", "url": "https://omabrowser.org/oma/group/A0A5G2QCK5/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P42935-1", "protein_name": "Elongator complex protein 2", "gene_name": "ELP2", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MVECITPEAIFIGANKQTQVSDIHKVKKIVAFGAGKTIALWDPIEPNNKGVYATLKGHEAEVTCVRFVPDSDFMVSASEDHHVKIWKFTDYSHLQCIQTIQHYSKTIVALSALPSLISVGCADGTISIWRQNIQNDEFGLAHEFTIKKGFFYPLCLSLSKVEEKKYLLAIGGTNVNVFIASFILSDSGIEKCRVVAELEGHEDWVKSLAFRHQETPGDYLLCSGSQDRYIRLWRIRINDLIDDSEEDSKKLTLLSNKQYKFQIDDELRVGINFEALIMGHDDWISSLQWHESRLQLLAATADTSLMVWEPDETSGIWVCSLRLGEMSSKGASTATGSSGGFWSCLWFTHERMDFFLTNGKTGSWRMWATKDNIICDQRLGISGATKDVTDIAWSPSGEYLLATSLDQTTRLFAPWIYDASGRKREIATWHEFSRPQIHGYDMICVETVTDTRFVSGGDEKILRSFDLPKGVAGMLQKFVGIQFEEKSEMPDSATVPVLGLSNKAGEDDANEDDEEEEGGNKETPDITDPLSLLECPPMEDQLQRHLLWPEVEKLYGHGFEITCLDISPDQKLIASACRSNNVQNAVIRIFSTENWLEIKPALPFHSLTITRLKFSKDGKFLLSVCRDRKWALWERNMEDNTFELRFKNEKPHTRIIWDADWAPLEFGNVFVTASRDKTVKVWRHQKEPADDYVLEASIKHTKAVTAISIHDSMIREKILISVGLENGEIYLYSYTLGKFELITQLNEDITPADKITRLRWSHLKRNGKLFLGVGSSDLSTRIYSLAYE", "length": 788 }, "evidence": [ { "id": "A0A5G2QCK5", "url": "https://omabrowser.org/oma/group/A0A5G2QCK5/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q05AM5-1", "protein_name": "Elongator complex protein 2", "gene_name": "elp2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAAPVMDTCHVSCCANRAPNVVSWGRGGLIAFGTCNSVAIYNPEEIRVVDLLNKHTGRVNAVQWVHEPDCSPENQLISGGSDNNVIVWEKLDGKFRACAVCSGHSGPVCAVDAVSLSSSHLLVASASSDSTVKLWTYSSDAAECLQTVAFGSGFMMDVSLALLPGSRVPVLACGGDDSRVHLYVQLSGQFQRVLTLTGHEDWVRGVEWANKDGELWLASCSQDCLIRVWRLFAKTAAEPDLQTDGIIKMKENIFQVSGEEFAVTLETVLAGHENWVYGIHWQPPSVKGDSVEQSLKLLSASMDKTMILWGPEEDSGMWVEMVRVGEVGGNTLGFYGCQMSPDGSMILAHAFHGALHLWHHDSNQEWRPSVVISGHFNAVQDMSWDPEGEFIITVGSDQTTRLFTPWTRKGSSQITWHEISRPQIHGYDMQCLTMVGRFQFVSGADEKVLRVFKAPRNFVENFAHISGTSLEKLLGCNDIADLPEGASTPALGLSNKAVFQGDLASPSPQQDGGDFNSLSDQYKESYFQPLKLAEPPTEDDLLQNTLWPEVQKLYGHGFEMFCLASDCARTVVASACKASKAEHASILLWSTASWKQLQSLSCHSLTITQMAFSPNGQLLLAVSRDRTWSLWRRGNPDLDTEAMFSLYANTSKDTSVHTRIIWSCDWSADNKYFVTSSRDKKVIIWGHAVSGVAVGEGEDARVTSCSSVLDVGDSATAVSICPFLCSDHSYLLAVGLENGQILLYKWKPLEDLSSESDWSRCKDTDACQGHTMVVKRLRWRPRLGRGGHGGQDSKEEQAWVQLASAGADHVVKIFDINLSAL", "length": 821 }, "evidence": [ { "id": "A0A5G2QCK5", "url": "https://omabrowser.org/oma/group/A0A5G2QCK5/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q496Z0-1", "protein_name": "Elongator complex protein 2", "gene_name": "Elp2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSSVLEVSYVFCCPNRARGALSWNSGPGGLLAFGTSCSVVLYDPQKKVVITNLNGHTARVNCLHWIRTEDGSPSTELVSGASDNRVIHWELENNQVLKSVRLQGHEGPVYAVHGIYQSGPSDGEQHALIASAASDSTVRLWSKKGSEVKCLQILKFGDGFVLTVCLSTLPDTDAPVLACGDDGGRIHLFVQQDDWFQKMLSLCGHEDWIRGVEWATFGRDLFLASCSQDCLIRIWRLYMKPTSLETEDGSIRLKENTFTIKDGGVSTTVAVILETVLAGHENWVNAIHWQPSFYKDGVLHQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYGCQFGENGSMIIAHAFHGAMHLWKQSTVNPRQWAPEIVISGHFDGVQDLIWDPEGEFIITTSTDQTTRLFAPWKKKNQSQVTWHEIARPQIHGYNLKCLAMIDRFQFVSGADEKVLRVFSAPRNFVENFSVISRQSLSHMLYDEDNDLPEGATVPALGLSNKAVFEGDMTYLTSEEEELLSPAFGYPQVIFQPAVLSEPPTEDHLLQNTLWPEVQKLYGHGYEIFCVTCNNSKTLLASACKAAQKEHAAIILWSTTSWKQVQSLAYHTLTVTQMAFSPDDKFLLAVSRDRTWSLWKRQDVTSAEFDPFFSLFAFTNKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVWGECNSSYNPMEHPINPCSSILDVGSCVTAVSVCPVLNPAQRYIVAVGLESGKICIYSWSKTNQETKDWTSCVETTPSQSHTLGIRRLCWKSCSGSTEQSEEGTEWLDFASCGEDHTVKIYRVNRCAL", "length": 821 }, "evidence": [ { "id": "A0A5G2QCK5", "url": "https://omabrowser.org/oma/group/A0A5G2QCK5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6IA86-1", "protein_name": "Elongator complex protein 2", "gene_name": "ELP2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVAPVLETSHVFCCPNRVRGVLNWSSGPRGLLAFGTSCSVVLYDPLKRVVVTNLNGHTARVNCIQWICKQDGSPSTELVSGGSDNQVIHWEIEDNQLLKAVHLQGHEGPVYAVHAVYQRRTSDPALCTLIVSAAADSAVRLWSKKGPEVMCLQTLNFGNGFALALCLSFLPNTDVPILACGNDDCRIHIFAQQNDQFQKVLSLCGHEDWIRGVEWAAFGRDLFLASCSQDCLIRIWKLYIKSTSLETQDDDNIRLKENTFTIENESVKIAFAVTLETVLAGHENWVNAVHWQPVFYKDGVLQQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYDCQFNEDGSMIIAHAFHGALHLWKQNTVNPREWTPEIVISGHFDGVQDLVWDPEGEFIITVGTDQTTRLFAPWKRKDQSQVTWHEIARPQIHGYDLKCLAMINRFQFVSGADEKVLRVFSAPRNFVENFCAITGQSLNHVLCNQDSDLPEGATVPALGLSNKAVFQGDIASQPSDEEELLTSTGFEYQQVAFQPSILTEPPTEDHLLQNTLWPEVQKLYGHGYEIFCVTCNSSKTLLASACKAAKKEHAAIILWNTTSWKQVQNLVFHSLTVTQMAFSPNEKFLLAVSRDRTWSLWKKQDTISPEFEPVFSLFAFTNKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVWGECDSTDDCIEHNIGPCSSVLDVGGAVTAVSVCPVLHPSQRYVVAVGLECGKICLYTWKKTDQVPEINDWTHCVETSQSQSHTLAIRKLCWKNCSGKTEQKEAEGAEWLHFASCGEDHTVKIHRVNKCAL", "length": 826 }, "evidence": [ { "id": "A0A5G2QCK5", "url": "https://omabrowser.org/oma/group/A0A5G2QCK5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q7K4B3-1", "protein_name": "Elongator complex protein 2", "gene_name": "Elp2", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MQVENLHTSVACNRCTECADWGPNGWIAYGACNAIAIMDPKFQGNSAKVLFTLVEHTKRVNTVRWLDCDKLLSGGDDAIAILWELDETGTTKSFTLKGHTSGVNTVDGIRQQDGSWLLATAAADTTIKLWTFQDNNYVCFQTISLSDGFCFCLRLQLLPKSNQVLLAFSGDDETVSLWSEQVETAGEGDSLGRQFQRKHKLTGHEDWVRGLDFVVDGEDLLLASGSQDNFIRLWRIAPRSKEQMQENRVDLHQLSHNDDEIKVEEKILQLGKEAWYAVSLESVLYGHEGWIYGVHWHKTPDQELRLLSASIDKTVIIWAPTEEGIWLEEVRVGEVGGNSVGFYGGKFSGDGHSIMAHSYQGGFHIWSQDPDRPQLWTPGVIVGGHYGEVRDLAWEHSGAYLMTASADQTTRLHAPWLQDGANPTWHELARPQIHGYDMQALALLSRYKFASGAEEKIVRTFQAPANFIENFRHISGIENDDAGDVLLDSLPKGASVPSLGLSNKAVYKVDSEVESTSKTSKDEYPDNYFVPIALETPPQEETLMQNTLWPELQKLYGHGYEIFALAATADGSLLASTCKASNAEHAQIILWNPSNWKQIQKLSGHQLTVTQLSFSPDSRYLLSVSRDRRWCLYERQDSSVSYQLVASTDKSNGVHTRIIWSCDWSHDGQFFVTSSRDGKVVVWKKEEDCKESSLNGWQANGVLELKNESITAVAFSNSYLSGTDDTYILALGTETGLIKIYQFVRGAWKLLSDLNKSQAHHLTVRRLQFRPGKQLQLASCGEDHLVRIYDIKLT", "length": 794 }, "evidence": [ { "id": "A0A5G2QCK5", "url": "https://omabrowser.org/oma/group/A0A5G2QCK5/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q86H45-1", "protein_name": "Elongator complex protein 2", "gene_name": "elp2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNVSSDVDFISVGCNCLGDCLVWGQNKLAAYGAQNFIALFDPIQSKVLATLPGHKDRVNHICWVPNINEEYKNRYSSYENELLSCSSDNTIISWKQIKGGLNYQYKVVEVLKGHSDSVTNISVLDFPDGSLLMCSTSADNTVKLWRRESLTKENIDTDTLPKWECIQTIDFTPKCMECSSLAFIPGTTIPLLAVGGLEPKIHIYIQNLDSTTATLQFKKLMSLQGHQDWIRSLSFKTINEGEGEGEEEELILASSSQDFKIRLWKISKFTAEKQKQQQLDESGNGGANLLGSLSTQLSGVTSLSTKGYLFNCNSVKYIILLDAVLSGHDDWVYSIHWSPARRDQETGKKIQEQMLISASMDKTAIVWRPDRTTGIWIDESRVGDMGGNILGQYGAVFSPCSQYILSHGYNGAFHFWKQNTNQKSSFWEPQIVVSGHFGPVQDLMWSPDYSYFISCSTDRTLRLFSEWKRNNNNNNLENNKEQQIISWNEIARPQIHGYDLECFTFINKKTHVIVSGAEEKIMRAFVGSQNFVDTLLNISKVQPVNDGTQRPLAANQPSLGLSNKPYFTGGSDYNENIDNNNNNNNNNGNGEENTEDSIKMKMGGGDEGGGGEGMDTGYFEDEIPFNPEVLSEPPFEEHLLQSSLWPEIHKFYGHGNEIVAVACSADGMYLASTCRASSADQATVRIWNVSNWKECANLKGHTLTVVNLSFSHNSKYLLGVSRDRMWTLWERSASNSEEPFVKVISAPKSHGRIIWSGSWSHDDKFFATGARDKLVKVWNLDNIKDIKNACASTLPAFGSGVTCVEFAPKSSKFTGEHGDHLLAVGEDDGKITIWKSTTSTSNPKSLDWTCVHTISPLISHTLDVRRIRWRDTPTINGNSLTYQIVTCSVDHSVRIFNIKFD", "length": 901 }, "evidence": [ { "id": "A0A5G2QCK5", "url": "https://omabrowser.org/oma/group/A0A5G2QCK5/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q91WG4-1", "protein_name": "Elongator complex protein 2", "gene_name": "Elp2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVSSVLEVSHVFCCPNRVRGALSWNTGPGGLLAFGTSCSVVLYDPQKKVVITNLNGHTARVNCLQWIRTEDGSPSNELVSGGSDNRVIHWELENNQVLKSVRLQGHEGPVCAVHAIYQSGPSEGEQHALIASAASDSTVRIWSKKGSEVKYLQTLSFRDGFVLSVCLAILPGTNVPVLACGDDDCRIHLYIQQDDQFQKALSLCGHEDWIRGVEWATFGRDLFLASCSQDCLIRIWRLYMKPASFETKDGSLRLKENTFTIKDGGVRTTVAVTLETVLAGHENWVNAVHWQPSFYKDGVLQQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYDCQFGENGTMIIAHAFHGALHLWKQSTVNPRQWAPEIVISGHFDGVQDLMWDPEGEFIITTSTDQTTRLFAPWKKKDQKDRSQVTWHEIARPQIHGYNIKCLAMIDRFQFVSGADEKVLRVFSAPRNFVENFSVISRQSLSHMLCDDQDLPEGATVPALGLSNKALFQGDIASQPFEEDELISPAFGSPQVTFQPAVLNEPPTEDHLLQNTLWPEIQKLYGHGYEIVCVACNNSKTLLASACKASQKEHAAIILWSTASWKQVQSLAFHTLTVTQMTFSPDDKFLLAVSRDRTWSLWKRQDATSSEFDPFFSLFAFTNKITSVHSRIIWSCDWSPDNKYFFTGSRDKKVVVWGECKSSHNPMEHPIRPCSSILDVGSSVTAVSVCPVLNPAQRYIVAIGLESGKICIYSWNKTNQEINDWTSCVETNPSQSHSLGIRRLCWKSCSDDDDDDDDDDTEQSEEGPEWLHFASCGEDHTVKIYRVNRRAL", "length": 831 }, "evidence": [ { "id": "A0A5G2QCK5", "url": "https://omabrowser.org/oma/group/A0A5G2QCK5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCK5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCK5" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCK5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCK5" } ], "pmid": "" }, { "name": "elongator holoenzyme complex", "id": "GO:0033588", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033588", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCK5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCK5" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCK5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCK5" } ], "pmid": "" }, { "name": "transcription elongation factor complex", "id": "GO:0008023", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008023", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCK5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCK5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "tRNA wobble uridine modification", "id": "GO:0002098", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002098", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCK5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCK5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "protein kinase binding", "id": "GO:0019901", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019901", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCK5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCK5" } ], "pmid": "" }, { "name": "RNA polymerase II complex binding", "id": "GO:0000993", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000993", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCK5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCK5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 238, "end_pos": 240, "annotation": "n_glycosylation_sequon" }, { "start_pos": 345, "end_pos": 347, "annotation": "n_glycosylation_sequon" }, { "start_pos": 550, "end_pos": 552, "annotation": "n_glycosylation_sequon" }, { "start_pos": 574, "end_pos": 576, "annotation": "n_glycosylation_sequon" }, { "start_pos": 707, "end_pos": 709, "annotation": "n_glycosylation_sequon" }, { "start_pos": 71, "end_pos": 73, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QCK5-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 800, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QCK5-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QCK5" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 238, "end_pos": 240 }, { "start_pos": 345, "end_pos": 347 }, { "start_pos": 550, "end_pos": 552 }, { "start_pos": 574, "end_pos": 576 }, { "start_pos": 707, "end_pos": 709 }, { "start_pos": 71, "end_pos": 73 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, 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"https://www.uniprot.org/uniprotkb/A0A5G2QCN8", "locus": { "chromosome": "1", "start_pos": 262295353, "end_pos": 262322530, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005530", "url": "https://www.ensembl.org/id/ENSSSCG00000005530" } ] } } ], "crossref": [ { "id": "A0A5G2QCN8", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QCN8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000005530", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005530", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00086", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00086", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd09380", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd09380", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd09382", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd09382", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100739090", "url": "https://www.ncbi.nlm.nih.gov/gene/100739090", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001356", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001356", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001781", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001781", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009057", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009057", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017970", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017970", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050453", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050453", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24208", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24208", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24208:SF121", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24208:SF121", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00046", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00046", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00412", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00412", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QCN8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCN8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QCN8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCN8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QX35", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QX35", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QX35-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QX35-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0U4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0U4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0U4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0U4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R7E1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7E1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R7E1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7E1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RCX4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RCX4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RCX4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RCX4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SLQ9", "url": "https://www.uniprot.org/uniprotkb/F1SLQ9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SLQ9-1", "url": "https://www.uniprot.org/uniprotkb/F1SLQ9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MYWKHENAAPALPEGCRLPAKGGPTTEQVMAQPGSGCKATTRCLEGTAPPAMAQSDAEALAGALDKDEGRASPCTPSTPSVCSPPSAASSVPSAGKNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPPSRLPSTLSDDIHYSPFSSPERARMVTLHGYIESQVQCGQVHCRLPYTAPPVHLKADMDGPLSNRGEKVILFQY", "length": 392, "header": "tr|A0A5G2QCN8-1|A0A5G2QCN8_PIG Isoform 1 of LIM homeobox 6 OS=Sus scrofa OX=9823 GN=LHX6 PE=4 SV=1 CANONICAL=A0A5G2QCN8-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QCN8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCN8/entry", "sequence": { "sequence": "MYWKHENAAPALPEGCRLPAKGGPTTEQVMAQPGSGCKATTRCLEGTAPPAMAQSDAEALAGALDKDEGRASPCTPSTPSVCSPPSAASSVPSAGKNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPPSRLPSTLSDDIHYSPFSSPERARMVTLHGYIESQVQCGQVHCRLPYTAPPVHLKADMDGPLSNRGEKVILFQY", "length": 392, "header": "tr|A0A5G2QCN8-1|A0A5G2QCN8_PIG Isoform 1 of LIM homeobox 6 OS=Sus scrofa OX=9823 GN=LHX6 PE=4 SV=1 CANONICAL=A0A5G2QCN8-1" }, "locus": { "chromosome": "1", "start_pos": 262322313, "end_pos": 262299749, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000073213.2", "url": "https://www.ensembl.org/id/ENSSSCT00000073213.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062351.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062351.1" } ] } }, { "isoform_ac": "A0A5G2QX35-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QX35/entry", "sequence": { "sequence": "MYWKHENAAPALPEGCRLPAKGGPTTEQAQSDAEALAGALDKDEGRASPCTPSTPSVCSPPSAASSVPSAGKNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPPSRLPSTLSDDIHYSPFSSPERARMVTLHGYIESQVQCGQVHCRLPYTAPPVHLKADMDGPLSNRGEKVILFQY", "length": 368, "header": "tr|A0A5G2QX35-1|A0A5G2QCN8_PIG Computationally mapped isoform of LIM homeobox 6 OS=Sus scrofa OX=9823 GN=LHX6 PE=4 SV=1 CANONICAL=A0A5G2QCN8-1" }, "locus": { "chromosome": "1", "start_pos": 262322313, "end_pos": 262299749, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078868.2", "url": "https://www.ensembl.org/id/ENSSSCT00000078868.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062750.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062750.1" } ] } }, { "isoform_ac": "A0A5G2R0U4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0U4/entry", "sequence": { "sequence": "MYWKHENAAPALPEGCRLPAKGGPTTEQVMAQPGSGCKATTRCLEGTAPPAMAQSDAEALAGALDKDEGRASPCTPSTPSVCSPPSAASSVPSAGKNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPPSRLPSTLSDDIHYSPFSSPERARMVTLHGYIESHPFSVLTLPALPHLSMGAPQLPLSR", "length": 377, "header": "tr|A0A5G2R0U4-1|A0A5G2QCN8_PIG Computationally mapped isoform of LIM homeobox 6 OS=Sus scrofa OX=9823 GN=LHX6 PE=4 SV=2 CANONICAL=A0A5G2QCN8-1" }, "locus": { "chromosome": "1", "start_pos": 262322313, "end_pos": 262299690, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080673.2", "url": "https://www.ensembl.org/id/ENSSSCT00000080673.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064116.2", "url": "https://www.ensembl.org/id/ENSSSCP00000064116.2" } ] } }, { "isoform_ac": "A0A5G2R7E1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7E1/entry", "sequence": { "sequence": "MAQPGSGCKATTRCLEGTAPPAMAQSDAEALAGALDKDEGRASPCTPSTPSVCSPPSAASSVPSAGKNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPPSRLPSTLSDDIHYSPFSSPERARMVTLHGYIESQVQCGQVHCRLPYTAPPVHLKADMDGPLSNRGEKVILFQY", "length": 363, "header": "tr|A0A5G2R7E1-1|A0A5G2QCN8_PIG Computationally mapped isoform of LIM homeobox 6 OS=Sus scrofa OX=9823 GN=LHX6 PE=4 SV=1 CANONICAL=A0A5G2QCN8-1" }, "locus": { "chromosome": "1", "start_pos": 262321074, "end_pos": 262299749, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076807.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076807.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072995.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072995.1" } ] } }, { "isoform_ac": "A0A5G2RCX4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RCX4/entry", "sequence": { "sequence": "MIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPPSRLPSTLSDDIHYSPFSSPERARMVTLHGYIESQVQCGQVHCRLPYTAPPVHLKADMDGPLSNRGEKVILFQY", "length": 176, "header": "tr|A0A5G2RCX4-1|A0A5G2QCN8_PIG Computationally mapped isoform of LIM homeobox 6 OS=Sus scrofa OX=9823 GN=LHX6 PE=4 SV=1 CANONICAL=A0A5G2QCN8-1" }, "locus": { "chromosome": "1", "start_pos": 262310945, "end_pos": 262299749, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079228.2", "url": "https://www.ensembl.org/id/ENSSSCT00000079228.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072147.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072147.1" } ] } }, { "isoform_ac": "F1SLQ9-1", "url": "https://www.uniprot.org/uniprotkb/F1SLQ9/entry", "sequence": { "sequence": "ILRGLYRRNAENRGAGLVMAQPGSGCKATTRCLEGTAPPAMAQSDAEALAGALDKDEGRASPCTPSTPSVCSPPSAASSVPSAGKNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPPSRLPSTLSDDIHYSPFSSPERARMVTLHGYIESHPFSVLTLPALPHLSMGAPQLPLSR", "length": 366, "header": "tr|F1SLQ9-1|F1SLQ9_PIG Computationally mapped isoform of LIM homeobox 6 OS=Sus scrofa OX=9823 GN=LHX6 PE=4 SV=4 CANONICAL=A0A5G2QCN8-1" }, "locus": { "chromosome": "1", "start_pos": 262321928, "end_pos": 262299690, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000006081.5", "url": "https://www.ensembl.org/id/ENSSSCT00000006081.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005926.4", "url": "https://www.ensembl.org/id/ENSSSCP00000005926.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 78, "start_aa": "Thr", "end_pos": 78, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr78", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R0U4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0U4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCN8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCN8" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCN8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCN8" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCN8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCN8" } ], "pmid": "" }, { "name": "RNA polymerase II transcription regulatory region sequence-specific DNA binding", "id": "GO:0000977", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000977", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCN8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCN8" } ], "pmid": "" }, { "name": "sequence-specific double-stranded DNA binding", "id": "GO:1990837", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990837", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCN8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCN8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCN8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCN8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCN8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCN8" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCN8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCN8" } ], "pmid": "" }, { "name": "neuron differentiation", "id": "GO:0030182", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030182", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCN8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCN8" } ], "pmid": "" }, { "name": "forebrain neuron development", "id": "GO:0021884", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0021884", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCN8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCN8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QCN8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 392, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QCN8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QCN8" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QCN8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCN8" }, { "id": "PS50071", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50071" }, { "id": "PRU00108", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00108" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Homeobox", "eco_id": "ECO_0000259", "start_pos": 246, "end_pos": 306, "start_aa": "Lys", "end_aa": "His", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A5G2QCN8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCN8" }, { "id": "PS50023", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50023" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "LIM zinc-binding", "eco_id": "ECO_0000259", "start_pos": 97, "end_pos": 157, "start_aa": "Asn", "end_aa": "Gly", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 78 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2Q8U0-1", "uniprot_ac": "A0A5G2Q8U0", "uniprot_id": "A0A5G2Q8U0_PIG", "mass": { "chemical_mass": 80749.0, "monoisotopic_mass": 80749.0 }, "refseq": { "ac": "XP_020948959", "name": "metal regulatory transcription factor 1 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020948959" }, "gene_names": [ { "name": "MTF1", "type": "recommended", "evidence": [ { "id": "A0A5G2Q8U0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0" } ] }, { "name": "MTF1", "type": "synonym", "evidence": [ { "id": "XP_020948959", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020948959" } ] } ], "protein_names": [ { "name": "Metal regulatory transcription factor 1", "type": "recommended", "evidence": [ { "id": "A0A5G2Q8U0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0/entry#names_and_taxonomy" } ] }, { "name": "MRE-binding transcription factor", "type": "synonym", "evidence": [ { "id": "A0A5G2Q8U0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0/entry#names_and_taxonomy" } ] }, { "name": "Transcription factor MTF-1", "type": "synonym", "evidence": [ { "id": "A0A5G2Q8U0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0/entry#names_and_taxonomy" } ] }, { "name": "metal regulatory transcription factor 1 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020948959", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020948959" } ] } ], "function": [ { "annotation": "Zinc-dependent transcriptional regulator of cellular adaption to conditions of exposure to heavy metals. Binds to metal responsive elements (MRE) in promoters and activates the transcription of metallothionein genes like metallothionein-2/MT2A. Also regulates the expression of metalloproteases in response to intracellular zinc and functions as a catabolic regulator of cartilages.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKW4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKW4#function" }, { "database": "UniProtKB", "id": "ARBA00056278", "url": "https://www.uniprot.org/uniprotkb/ARBA00056278#function" }, { "database": "UniProtKB", "id": "A0A5G2Q8U0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MTF1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0", "locus": { "chromosome": "6", "start_pos": 93839205, "end_pos": 93884409, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000037516", "url": "https://www.ensembl.org/id/ENSSSCG00000037516" } ] } } ], "crossref": [ { "id": "A0A5G2Q8U0", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2Q8U0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000037516", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000037516", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100511998", "url": "https://www.ncbi.nlm.nih.gov/gene/100511998", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050329", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050329", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051061", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051061", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "KGHLYNA", "url": "https://omabrowser.org/oma/group/KGHLYNA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2Q8U0", "url": "https://www.orthodb.org/?gene=A0A5G2Q8U0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR19818", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19818", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR19818:SF151", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19818:SF151", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46179", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46179", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46179:SF25", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46179:SF25", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020948959", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020948959", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZKW4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKW4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZKW4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKW4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q8U0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q8U0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGEHSPDNSISYFEAEEDELTPDDKMLRFVDKNGLVPSSSGTVYDRTTVLIEQDPGTLEDDDDDGQCGEHLPFLVGGEEGFHLIDHEAMSQGYVQHIISPDQIHLTINPGSTPMPRNIEGATLTLQSECPETKRKEVKRYQCTFEGCPRTYSTAGNLRTHQKTHRGEYTFVCNQEGCGKAFLTSYSLRIHVRVHTKEKPFECDVQGCEKAFNTLYRLKAHQRLHTGKTFNCESEGCSKYFTTLSDLRKHIRTHTGEKPFRCDHDGCGKAFAASHHLKTHVRTHTGERPFFCPSNGCEKTFSTQYSLKSHMKGHDNKGHSYSALLNHNGSEDTNHSLCLRNLSLLSTDSEFQENSSTGQNLSTLSPTILFGPMFQKPEDTAIQEDPQQTAALIESFNGDAESVSDVPPSSRHSASLSLPLVLQPGLSEPPQPLLPASAPSAPLPAPSLGTGSQQAAFGNPPALLQPPEVPVPHSTQFAANHQEFLPHPQAPQPGLSVPGLSVVAGALASAMAAPPQPQSTTEPLPAMVQTLPLDANSVLTSNPTITITPTPSTAILQPSLVMGEQNLQWILNGATSSPQTQEQIQQASKVEKVFFTTAVPVASSTGSAVQQIGLSVPVIIIKQEEACQCQCACRDSAKERAASRRKGCSSPPPPELSAQPPDGPGLKLPPQTFSPPPIPLSSSSAASSSCEQSRQAVTPSDPPTETLRAMDMSEFLSLQSLDTPSNLIPIEALLQEEEEMGLTSSFSK", "length": 747, "header": "tr|A0A5G2Q8U0-1|A0A5G2Q8U0_PIG Isoform 1 of Metal regulatory transcription factor 1 OS=Sus scrofa OX=9823 GN=MTF1 PE=4 SV=1 CANONICAL=A0A5G2Q8U0-1" }, "isoforms": [ { "isoform_ac": "A0A286ZKW4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKW4/entry", "sequence": { "sequence": "MGEHSPDNSISYFEAEEDELTPDDKMLRFVDKNGLVPSSSGTVYDRTTVLIEQDPGTLEDDDDDGQCGEHLPFLVGGEEGFHLIDHEAMSQGYVQHIISPDQIHLTINPGSTPMPRNIEGATLTLQSECPRTYSTAGNLRTHQKTHRGEYTFVCNQEGCGKAFLTSYSLRIHVRVHTKEKPFECDVQGCEKAFNTLYRLKAHQRLHTGKTFNCESEGCSKYFTTLSDLRKHIRTHTGEKPFRCDHDGCGKAFAASHHLKTHVRTHTGERPFFCPSNGCEKTFSTQYSLKSHMKGHDNKGHSYSALLNHNGSEDTNHSLCLRNLSLLSTDSEFQENSSTGQNLSTLSPTILFGPMFQKPEDTAIQEDPQQTAALIESFNGDAESVSDVPPSSRHSASLSLPLVLQPGLSEPPQPLLPASAPSAPLPAPSLGTGSQQAAFGNPPALLQPPEVPVPHSTQFAANHQEFLPHPQAPQPGLSVPGLSVVAGALASAMAAPPQPQSTTEPLPAMVQTLPLDANSVLTSNPTITITPTPSTAILQPSLVMGEQNLQWILNGATSSPQTQEQIQQASKVEKVFFTTAVPVASSTGSAVQQIGLSVPVIIIKQEEACQCQCACRDSAKERAASRRKGCSSPPPPELSAQPPDGPGLKLPPQTFSPPPIPLSSSSAASSSCEQSRQAVTPSDPPTETLRAMDMSEFLSLQSLDTPSNLIPIEALLQEEEEMGLTSSFSK", "length": 729, "header": "tr|A0A286ZKW4-1|A0A5G2Q8U0_PIG Computationally mapped isoform of Metal regulatory transcription factor 1 OS=Sus scrofa OX=9823 GN=MTF1 PE=4 SV=2 CANONICAL=A0A5G2Q8U0-1" }, "locus": { "chromosome": "6", "start_pos": 93882201, "end_pos": 93840432, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055389.3", "url": "https://www.ensembl.org/id/ENSSSCT00000055389.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032204.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032204.2" } ] } }, { "isoform_ac": "A0A5G2Q8U0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0/entry", "sequence": { "sequence": "MGEHSPDNSISYFEAEEDELTPDDKMLRFVDKNGLVPSSSGTVYDRTTVLIEQDPGTLEDDDDDGQCGEHLPFLVGGEEGFHLIDHEAMSQGYVQHIISPDQIHLTINPGSTPMPRNIEGATLTLQSECPETKRKEVKRYQCTFEGCPRTYSTAGNLRTHQKTHRGEYTFVCNQEGCGKAFLTSYSLRIHVRVHTKEKPFECDVQGCEKAFNTLYRLKAHQRLHTGKTFNCESEGCSKYFTTLSDLRKHIRTHTGEKPFRCDHDGCGKAFAASHHLKTHVRTHTGERPFFCPSNGCEKTFSTQYSLKSHMKGHDNKGHSYSALLNHNGSEDTNHSLCLRNLSLLSTDSEFQENSSTGQNLSTLSPTILFGPMFQKPEDTAIQEDPQQTAALIESFNGDAESVSDVPPSSRHSASLSLPLVLQPGLSEPPQPLLPASAPSAPLPAPSLGTGSQQAAFGNPPALLQPPEVPVPHSTQFAANHQEFLPHPQAPQPGLSVPGLSVVAGALASAMAAPPQPQSTTEPLPAMVQTLPLDANSVLTSNPTITITPTPSTAILQPSLVMGEQNLQWILNGATSSPQTQEQIQQASKVEKVFFTTAVPVASSTGSAVQQIGLSVPVIIIKQEEACQCQCACRDSAKERAASRRKGCSSPPPPELSAQPPDGPGLKLPPQTFSPPPIPLSSSSAASSSCEQSRQAVTPSDPPTETLRAMDMSEFLSLQSLDTPSNLIPIEALLQEEEEMGLTSSFSK", "length": 747, "header": "tr|A0A5G2Q8U0-1|A0A5G2Q8U0_PIG Isoform 1 of Metal regulatory transcription factor 1 OS=Sus scrofa OX=9823 GN=MTF1 PE=4 SV=1 CANONICAL=A0A5G2Q8U0-1" }, "locus": { "chromosome": "6", "start_pos": 93882201, "end_pos": 93840432, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071853.2", "url": "https://www.ensembl.org/id/ENSSSCT00000071853.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060666.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060666.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 112, "start_aa": "Thr", "end_pos": 112, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr112", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 549, "start_aa": "Thr", "end_pos": 549, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr549", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 697, "start_aa": "Thr", "end_pos": 697, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr697", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKW4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKW4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2KFP7-1", "protein_name": "Metal regulatory transcription factor 1", "gene_name": "mtf1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTGASIYRRNKSTHVDTNPGLSFSVRIMGENGPLSETAMLFEDEEEDVDKLGREEEDEDKMANFDKDGNMISGPSSSSGTVYDRTTVLIEQDPIRLDEEGEEDGMTFLPEGEGDEGSLAFMGDPDGMSQGYIHHTISPDQIQFIINPGSTPMPRNIEGATLTLHSECPETKQREVKRYQCLFEGCTRTYSTAGNLRTHQKTHRGEYTFVCNQQGCGKAFLTSYSLKIHVRVHTKEKPFECDVQGCEKAFNTLYRLKAHQRLHTGKTFNCESEGCTKYFTTLSDLRKHIRTHTGEKPFRCDHDGCGKAFAASHHLKTHVRTHTGEKPFFCPSDGCEKTFSSQYSLKSHIRGHDKGPSFTVSSHPLSEDANHSLCLSDLSLISTDSELQENHNSQGLDLNSVTPIRIFELMFQSPENSVSEDDPKPTESLAESFGLEPSPQTAPADASTHPAFPQPPPSTCSSSCSITAPAQDAQTPPTTQQAPPPAVSSSSQTSSFPSAPPSSSQPAEVSSPSAPSATQHYMMAQPVSSPSAASVSSVPAGTAEVTAAVTHTVPLAAPPTISIAPTLGLQPSLVMSDQNLQWILSSAASAQQNPEQQGPKVEKVFFTTAIPVGGNSGNAVQQIGLSLPVIIIKQEESCQCHCACRDSAKDKSTSSSQDKTKNTSPPPPPAPPPPPPALPKEPPSCCPSKPHTQPQQDLPTAPLTPNPPTDALGSMDVSDLLSPETTANIEALLMVADGFSMADGGGSGAP", "length": 749 }, "evidence": [ { "id": "A0A5G2Q8U0", "url": "https://omabrowser.org/oma/group/A0A5G2Q8U0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "D3ZBT4-1", "protein_name": "Metal regulatory transcription factor 1", "gene_name": "Mtf1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEHSPDDNIIFFKGEEDDLTPHDKMLRFVDDNGLVPSSSGTVYDRTTVLIEQDPGTLEDDEDDVQCGEHLPFLVEGEEGFLIDQEAMSQGYVQHIISPDQIHLTINPGSTPMPRNIEGATLTLQSECPETKRKEVKRYQCTFEGCPRTYSTAGNLRTHQKTHRGEYTFVCNQEGCGKAFLTSYSLRIHVRVHTKEKPFECDVQGCEKAFNTLYRLKAHQRLHTGKTFNCESQGCSKYFTTLSDLRKHIRTHTGEKPFRCDHDGCGKAFAASHHLKTHVRTHTGERPFFCPSNGCEKTFSTQYSLKSHMKGHDNKGTAYSALPQHNGSEDTNHSLYLSELGLLSTDSELQENSSSTQDQDLSTISPAIIFESMFQNPDDPAIQDDPLHTAALIDSFNGDAESVSDVPPPAGNSASLSLPLVLQPGISEPPQPLLPASTPSAPPPAPSLGPGSQPAAFGSPPALLQPPEVPVPHSTQFAANHQEFLPHPQAPPQTIVPGLSVVAGAPASAATVASAVAAPAPPQSTTEPLPAMVQTLPLGANSVLTNNPTITITPTPNTAILQSSLVMGEQNLQWILNGATSSPQNQEQIQQASKVEQVYFTTAVPVASSTGSSVQQIGLSVPVIIIKQEEACQCQCACRDSAKERAAGRRKGCSSPPPPEPNPQPPDGPSLQLPP", "length": 675 }, "evidence": [ { "id": "A0A5G2Q8U0", "url": "https://omabrowser.org/oma/group/A0A5G2Q8U0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q07243-1", "protein_name": "Metal regulatory transcription factor 1", "gene_name": "Mtf1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGEHSPDDNIIFFKGEEDDLTPHDKMLRFVDDNGLVPSSSGTVYDRTTVLIEQDPGTLEDDEDDGQCGEPLPFLVEGEEGFLIDQEAMSQGYVQHIISPDQIHLTINPGSTPMPRNIEGATLTLQSECPETKRKEVKRYQCTFEGCPRTYSTAGNLRTHQKTHRGEYTFVCNQEGCGKAFLTSYSLRIHVRVHTKEKPFECDVQGCEKAFNTLYRLKAHQRLHTGKTFNCESQGCSKYFTTLSDLRKHIRTHTGEKPFRCDHDGCGKAFAASHHLKTHVRTHTGERPFFCPSNGCEKTFSTQYSLKSHMKGHDNKGTAYSALPQHNGSEDTNHSLYLSELGLLSTDSELQENSSSTQDQDLSTISPAIIFESMFQNSDDPGIQDDPLQTAALIDSFNGDAESVIDVPPPAGNSASLSLPLVLQSGISEPPQPLLPATAPSAPPPAPSLGPGSQPAAFGSPPALLQPPEVPVPHSTQFAANHQEFLPHPQAPPQTIVPGLSVVAGAPASAATVASAVAAPAPPQSTTEPLPAMVQTLPLGANSVLTNNPTITITPTPNTAILQSSLVMGEQNLQWILNGATSSPQNQEQIQQASKVEQVYFATAVPVASGTGSSVQQIGLSVPVIIIKQEEACQCQCACRDSAKERAAGRRKGCSSPPPPEPNPQPPDGPSLQLPP", "length": 675 }, "evidence": [ { "id": "A0A5G2Q8U0", "url": "https://omabrowser.org/oma/group/A0A5G2Q8U0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q14872-1", "protein_name": "Metal regulatory transcription factor 1", "gene_name": "MTF1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGEHSPDNNIIYFEAEEDELTPDDKMLRFVDKNGLVPSSSGTVYDRTTVLIEQDPGTLEDEDDDGQCGEHLPFLVGGEEGFHLIDHEAMSQGYVQHIISPDQIHLTINPGSTPMPRNIEGATLTLQSECPETKRKEVKRYQCTFEGCPRTYSTAGNLRTHQKTHRGEYTFVCNQEGCGKAFLTSYSLRIHVRVHTKEKPFECDVQGCEKAFNTLYRLKAHQRLHTGKTFNCESEGCSKYFTTLSDLRKHIRTHTGEKPFRCDHDGCGKAFAASHHLKTHVRTHTGERPFFCPSNGCEKTFSTQYSLKSHMKGHDNKGHSYNALPQHNGSEDTNHSLCLSDLSLLSTDSELRENSSTTQGQDLSTISPAIIFESMFQNSDDTAIQEDPQQTASLTESFNGDAESVSDVPPSTGNSASLSLPLVLQPGLSEPPQPLLPASAPSAPPPAPSLGPGSQQAAFGNPPALLQPPEVPVPHSTQFAANHQEFLPHPQAPQPIVPGLSVVAGASASAAAVASAVAAPAPPQSTTEPLPAMVQTLPLGANSVLTNNPTITITPTPNTAILQSSLVMGEQNLQWILNGATSSPQNQEQIQQASKVEKVFFTTAVPVASSPGSSVQQIGLSVPVIIIKQEEACQCQCACRDSAKERASSRRKGCSSPPPPEPSPQAPDGPSLQLPAQTFSSAPVPGSSSSTLPSSCEQSRQAETPSDPQTETLSAMDVSEFLSLQSLDTPSNLIPIEALLQGEEEMGLTSSFSK", "length": 753 }, "evidence": [ { "id": "A0A5G2Q8U0", "url": "https://omabrowser.org/oma/group/A0A5G2Q8U0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0" } ], "pmid": "" }, { "name": "DNA-binding transcription activator activity, RNA polymerase II-specific", "id": "GO:0001228", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001228", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0" } ], "pmid": "" }, { "name": "histone acetyltransferase binding", "id": "GO:0035035", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035035", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0" } ], "pmid": "" }, { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0" } ], "pmid": "" }, { "name": "response to metal ion", "id": "GO:0010038", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010038", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0" } ], "pmid": "" }, { "name": "central nervous system development", "id": "GO:0007417", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007417", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0" } ], "pmid": "" }, { "name": "cellular response to zinc ion", "id": "GO:0071294", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071294", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8U0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 327, "end_pos": 329, "annotation": "n_glycosylation_sequon" }, { "start_pos": 333, "end_pos": 335, "annotation": "n_glycosylation_sequon" }, { "start_pos": 340, "end_pos": 342, "annotation": "n_glycosylation_sequon" }, { "start_pos": 353, "end_pos": 355, "annotation": "n_glycosylation_sequon" }, { "start_pos": 359, "end_pos": 361, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2Q8U0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 747, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2Q8U0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2Q8U0" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2Q8U0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8U0" }, { "id": "PS50157", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50157" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2H2-type", "eco_id": "ECO_0000259", "start_pos": 140, "end_pos": 169, "start_aa": "Tyr", "end_aa": "Thr", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 112, 549, 697 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 327, "end_pos": 329 }, { "start_pos": 333, "end_pos": 335 }, { "start_pos": 340, "end_pos": 342 }, { "start_pos": 353, "end_pos": 355 }, { "start_pos": 359, "end_pos": 361 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 3 }, { "field": "n_linked_glycan_sites", 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"evidence": [ { "id": "A0A5G2Q783", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q783/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q783", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q783" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ETNK2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q783", "locus": { "chromosome": "9", "start_pos": 64785567, "end_pos": 64807056, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015276", "url": "https://www.ensembl.org/id/ENSSSCG00000015276" } ] } } ], "crossref": [ { "id": "A0A5G2Q783", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2Q783", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000015276", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015276", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd05157", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd05157", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR011009", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011009", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PMIWTKT", "url": "https://omabrowser.org/oma/group/PMIWTKT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR22603", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22603", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22603:SF94", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22603:SF94", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01633", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01633", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-1483213", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1483213", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZNW3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNW3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZNW3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNW3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q783", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q783", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q783-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q783-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S6B0", "url": "https://www.uniprot.org/uniprotkb/F1S6B0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S6B0-1", "url": "https://www.uniprot.org/uniprotkb/F1S6B0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGHGGEGGGRRGLPGAAGPPRAAAVPCFGISVDHNDILPGALRLIRELRPHWKPEQVRTKRFTDGITNKLVACYVDEDMRDCVLVRVYGERTELLVDRENEVRNFQLLRAHGCAPKLYCTFQNGLCYEYMQGMALGPEHIREPRLFRLIALEMAKIHTIHANGSLPKPILWHKIHNYFTLVKNEINPSLSADVPKVEVLEQELAWLKEHLSQLDSPVVFCHNDLLCKNIIYDSTKGHVRFIDYEYAGYNYQAFDIGNHFNEFAGVNEVDYCLYPSRETQLQWLRYYLQAQKGMAVTPREVERLYVQVNKFALASHFLWALWALIQSQFSTIDFDFLRYAVIRFNQYFKVKPQVSALEMPK", "length": 360, "header": "tr|A0A5G2Q783-1|A0A5G2Q783_PIG Isoform 1 of ethanolamine kinase OS=Sus scrofa OX=9823 GN=ETNK2 PE=3 SV=2 CANONICAL=A0A5G2Q783-1" }, "isoforms": [ { "isoform_ac": "A0A286ZNW3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNW3/entry", "sequence": { "sequence": "MAKIHTIHANGSLPKPILWHKIHNYFTLVKNEINPSLSADVPKVEVLEQELAWLKEHLSQLDSPVVFCHNDLLCKNIIYDSTKGHVRFIDYEYAGYNYQAFDIGNHFNEFAGVNEVDYCLYPSRETQLQWLRYYLQAQKGMAVTPREVERLYVQVNKFALASHFLWALWALIQSQFSTIDFDFLRYAVIRFNQYFKVKPQVSALEMPK", "length": 208, "header": "tr|A0A286ZNW3-1|A0A5G2Q783_PIG Computationally mapped isoform of ethanolamine kinase OS=Sus scrofa OX=9823 GN=ETNK2 PE=3 SV=2 CANONICAL=A0A5G2Q783-1" }, "locus": { "chromosome": "9", "start_pos": 64801732, "end_pos": 64786473, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058185.2", "url": "https://www.ensembl.org/id/ENSSSCT00000058185.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033272.2", "url": "https://www.ensembl.org/id/ENSSSCP00000033272.2" } ] } }, { "isoform_ac": "A0A5G2Q783-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q783/entry", "sequence": { "sequence": "MGHGGEGGGRRGLPGAAGPPRAAAVPCFGISVDHNDILPGALRLIRELRPHWKPEQVRTKRFTDGITNKLVACYVDEDMRDCVLVRVYGERTELLVDRENEVRNFQLLRAHGCAPKLYCTFQNGLCYEYMQGMALGPEHIREPRLFRLIALEMAKIHTIHANGSLPKPILWHKIHNYFTLVKNEINPSLSADVPKVEVLEQELAWLKEHLSQLDSPVVFCHNDLLCKNIIYDSTKGHVRFIDYEYAGYNYQAFDIGNHFNEFAGVNEVDYCLYPSRETQLQWLRYYLQAQKGMAVTPREVERLYVQVNKFALASHFLWALWALIQSQFSTIDFDFLRYAVIRFNQYFKVKPQVSALEMPK", "length": 360, "header": "tr|A0A5G2Q783-1|A0A5G2Q783_PIG Isoform 1 of ethanolamine kinase OS=Sus scrofa OX=9823 GN=ETNK2 PE=3 SV=2 CANONICAL=A0A5G2Q783-1" }, "locus": { "chromosome": "9", "start_pos": 64806801, "end_pos": 64786639, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070304.2", "url": "https://www.ensembl.org/id/ENSSSCT00000070304.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059914.2", "url": "https://www.ensembl.org/id/ENSSSCP00000059914.2" } ] } }, { "isoform_ac": "F1S6B0-1", "url": "https://www.uniprot.org/uniprotkb/F1S6B0/entry", "sequence": { "sequence": "MGHGGEGGGRRGLPGAAGPPRAAAVPCFGISVDHNDILPGALRLIRELRPHWKPEQVRTKPGMGTCSFCWSGRSSMLRFTDGITNKLVACYVDEDMRDCVLVRVYGERTELLVDRENEVRNFQLLRAHGCAPKLYCTFQNGLCYEYMQGMALGPEHIREPRLFRLIALEMAKIHTIHANGSLPKPILWHKIHNYFTLVKNEINPSLSADVPKVEVLEQELAWLKEHLSQLDSPVVFCHNDLLCKNIIYDSTKGHVRFIDYEYAGYNYQAFDIGNHFNEFAGVNEVDYCLYPSRETQLQWLRYYLQAQKGMAVTPREVERLYVQVNKFALASHFLWALWALIQSQFSTIDFDFLRYAVIRFNQYFKVKPQVSALEMPK", "length": 377, "header": "tr|F1S6B0-1|A0A5G2Q783_PIG Computationally mapped isoform of ethanolamine kinase OS=Sus scrofa OX=9823 GN=ETNK2 PE=3 SV=5 CANONICAL=A0A5G2Q783-1" }, "locus": { "chromosome": "9", "start_pos": 64806801, "end_pos": 64786639, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016645.5", "url": "https://www.ensembl.org/id/ENSSSCT00000016645.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016199.5", "url": "https://www.ensembl.org/id/ENSSSCP00000016199.5" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 296, "start_aa": "Thr", "end_pos": 296, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr296", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNW3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNW3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-1483213", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1483213", "resource": "Reactome", "description": "Synthesis of PE" } ], "orthologs": [ { "uniprot_canonical_ac": "A7MCT6-1", "protein_name": "Ethanolamine kinase 2", "gene_name": "Etnk2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAVPPSAPVPCSPFYLRRQEPCPQCSWSMEEKAVASAGCWEPPGPPRAAVPCFSVTVEQDDILPGALRLIRELRPHWKPEQVRTKRFKDGITNKLLACYVEEDMRDCVLVRVYGERTELLVDRENEVRNFQLLRAHGCAPKLYCTFQNGLCYEYVQGVALGPEHIREPQLFRLIALEMAKIHTIHANGSLPKPTLWHKMHRYFTLVKDEISPSLSADVPKVEVLEQELAWLKEHLSQLDSPVVFCHNDLLCKNIIYDSDKGRVCFIDYEYAGYNYQAFDIGNHFNEFAGVNVVDYSRYPARETQVQWLRYYLEAQKGTAASPREVERLYAQVNKFALASHFFWALWALIQNQYSTISFDFLRYAVIRFNQYFKVKPQVSALEMPK", "length": 385 }, "evidence": [ { "id": "A0A5G2Q783", "url": "https://omabrowser.org/oma/group/A0A5G2Q783/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F1MRD9-1", "protein_name": "ethanolamine kinase", "gene_name": "ETNK2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEAAAGAGRGAPPGPPRAAAVPCFGISVDQDDILPGALRLIRELRPRWKPERVRTKRFTDGITNKLVACYVEEDMRDCVLVRVYGERTELLVDRESEVRNFQLLRAHGCAPKLYCTFQNGLCYEYMRGVALGPEHIREPRLFRLIALEMAKIHTIHANGSLPKPTLWHKIHNYFALVKNEINPSLSADVPEVGVLERELVWLKEHLPPLDSPVVFCHNDLLCKNIIYDSSKGHVRFIDYEYAGYNYQAFDIGNHFNEFAGVNEVDYSRYPARETQLLWLRYYLQAQNGTAVTPREVERLYVQVNKFALASHFLWALWALIQNQFSTIDFDFLRYAVIRFNQYFKVKPQVAALEMPK", "length": 356 }, "evidence": [ { "id": "A0A5G2Q783", "url": "https://omabrowser.org/oma/group/A0A5G2Q783/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F1NL82-1", "protein_name": "ethanolamine kinase", "gene_name": "ETNK2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGRGSGRSEPGMAVPPGRCPDCWETERGGGGGGSRGVPGVLQLGVLVDEGDVLPGALRLMRELRPSWEPARVKTKLFTDGITNKLVACYTDEDMADAVLVRVYGRKTELFVDRETELRNFQVLRAHGCAPDLYCAFQNGLCYEFLPGIALGPDHVRDPRIFRLVAQEMARVHAIHANGSLPKPILWQKLHKYLALVKMDLSPKVPNPSLHQDVPSLEMLEHELAWMKDTLSQLGSPVVLCHNDLLCKNIIYNRAQEHVRFIDYEYTGYNYQAFDIGNHFNEFAGVKEVDYRLYPSKETQLQWLRSYLQAYKQLTQGGQGGTGVTVSEKELEALYVQVNKFSLASHFLWACWGLIQDKYSTIDFNFLRYAKLRFRQYFKMKPVVTALQISK", "length": 390 }, "evidence": [ { "id": "A0A5G2Q783", "url": "https://omabrowser.org/oma/group/A0A5G2Q783/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "O81024-1", "protein_name": "Probable ethanolamine kinase", "gene_name": "EMB1187", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGAAKNIWALANAEDAANDAEQIPYSSFVVDTSLPLPLMIPRIIELCKDLFKNWGELDDSLFSVERVSGGITNLLLKVSVKEDTNKEVSVTVRLYGPNTEYVINREREILAIKYLSAAGFGAKLLGGFGNGMVQSFINARTLEPSDMREPKIAAQIARELGKFHKVDIPGSKEPQLWVDILKFYEKASTLTFEEPDKQKLFETISFEELHKEIIELREFTGLLNAPVVFAHNDLLSGNFMLNDEEEKLYLIDFEYGSYNYRGFDIGNHFNEYAGYDCDYSLYPSKEEQYHFIKHYLQPDKPDEVSIAEVESVFVETDAYKLASHLYWAIWAIIQARMSPIEFEYLGYFFLRYNEYKKQKPLTFSLVTSHLSASL", "length": 374 }, "evidence": [ { "id": "A0A5G2Q783", "url": "https://omabrowser.org/oma/group/A0A5G2Q783/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9NVF9-1", "protein_name": "Ethanolamine kinase 2", "gene_name": "ETNK2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAVPPSAPQPRASFHLRRHTPCPQCSWGMEEKAAASASCREPPGPPRAAAVAYFGISVDPDDILPGALRLIQELRPHWKPEQVRTKRFTDGITNKLVACYVEEDMQDCVLVRVYGERTELLVDRENEVRNFQLLRAHSCAPKLYCTFQNGLCYEYMQGVALEPEHIREPRLFRLIALEMAKIHTIHANGSLPKPILWHKMHNYFTLVKNEINPSLSADVPKVEVLERELAWLKEHLSQLESPVVFCHNDLLCKNIIYDSIKGHVRFIDYEYAGYNYQAFDIGNHFNEFAGVNEVDYCLYPARETQLQWLHYYLQAQKGMAVTPREVQRLYVQVNKFALASHFFWALWALIQNQYSTIDFDFLRYAVIRFNQYFKVKPQASALEMPK", "length": 386 }, "evidence": [ { "id": "A0A5G2Q783", "url": "https://omabrowser.org/oma/group/A0A5G2Q783/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "ethanolamine kinase activity", "id": "GO:0004305", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004305", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q783", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q783" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q783", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q783" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "phospholipid biosynthetic process", "id": "GO:0008654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008654", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q783", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q783" } ], "pmid": "" }, { "name": "phosphatidylethanolamine biosynthetic process", "id": "GO:0006646", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006646", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q783", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q783" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q783", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q783" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 162, "end_pos": 164, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-1483222", "name": "ETA is phosphorylated to PETA by CHK/ETNK", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [ "R-ALL-1498751" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1483222", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1483222" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-1498751", "participant_name": "ETA [cytosol]", "crossref": [ { "id": "57603", "database": "ChEBI", "url": "" }, { "id": "ZINC000008214617", "database": "ZINC", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2Q783-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 360, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2Q783-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2Q783" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 296 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 162, "end_pos": 164 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QBB2-1", "uniprot_ac": "A0A5G2QBB2", "uniprot_id": "A0A5G2QBB2_PIG", "mass": { "chemical_mass": 146871.0, "monoisotopic_mass": 146871.0 }, "refseq": { "ac": "XP_020947919", "name": "pleckstrin homology domain-containing family A member 5 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020947919" }, "gene_names": [ { "name": "PLEKHA5", "type": "recommended", "evidence": [ { "id": "A0A5G2QBB2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBB2" } ] }, { "name": "PLEKHA5", "type": "synonym", "evidence": [ { "id": "XP_020947919", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020947919" } ] } ], "protein_names": [ { "name": "Pleckstrin homology domain containing A5", "type": "synonym", "evidence": [ { "id": "A0A5G2QBB2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBB2/entry#names_and_taxonomy" } ] }, { "name": "pleckstrin homology domain-containing family A member 5 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020947919", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020947919" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBB2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBB2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PLEKHA5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBB2", "locus": { "chromosome": "5", "start_pos": 53760824, "end_pos": 54016886, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000588", "url": "https://www.ensembl.org/id/ENSSSCG00000000588" } ] } } ], "crossref": [ { "id": "ENSSSCG00000000588", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000588", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00201", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00201", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd13248", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13248", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100523186", "url": "https://www.ncbi.nlm.nih.gov/gene/100523186", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001202", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001202", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001849", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001849", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036020", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036020", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040392", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040392", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057971", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057971", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR12752", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12752", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12752:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12752:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00169", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00169", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00397", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00397", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25541", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25541", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-1660499", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1660499", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020947919", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020947919", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZR35", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR35", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZR35-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR35-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZYP0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZYP0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZYP0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZYP0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B0I1", "url": "https://www.uniprot.org/uniprotkb/A0A287B0I1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B0I1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B0I1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BJU9", "url": "https://www.uniprot.org/uniprotkb/A0A287BJU9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BJU9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BJU9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BLI4", "url": "https://www.uniprot.org/uniprotkb/A0A287BLI4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BLI4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BLI4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QBB2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBB2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QBB2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBB2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QWU0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWU0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QWU0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWU0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQZ2", "url": "https://www.uniprot.org/uniprotkb/F1SQZ2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQZ2-1", "url": "https://www.uniprot.org/uniprotkb/F1SQZ2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MHNHNKPFWRSCLSCGCNDMLVRDVSLVADWQQWQASPAAPVYFLGAWSPQRSFGSSSKTKQWSQIFTPGSVFPVVECLFYKCDFDGACHNERKVTCKHPVTGQPSQDNCIFVVNEQTVATMTSEEKKERPISMINEASNYNMTSDYAVHPMSPVGRTSRSSKKVHNFGKRSNSIKRNPNAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIAMLTSEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAALVQTEPVKRVDKITSENAPTKEINNFPNHRVLIKPETQNNQKNKEMSKTEEKKALEAEKYGFQKDGQDRPLTKINSVKLNSLSSEYESGSACPSQTGHYRPVNMNSSENKAVNVSLADLRGGSHPSTGPLHTEADRVIQRTNSMQQLEQWIKIQKGRGHEEETRGVISYQTLPRNMPSHRAQIVARYPEGYRTLPRNSKARPESICSVTPSAHDKIAGPGAEEKRRSMRDDTMWQLYEWQQRQFYSKQGTLPRHSTLTSPKTMVNLADQTMHSIPTSPSHGSIAAYQGYSPQRTYRSEVSSPIQRGDVTIDRRHRGHHPKHVYVPDRRSMPAGLTLQSVSPQSLQGKTPEELTLLLIKLRRQQAELSSIREHTLAQLMQLKLEAHSPKNEILSHHLQRNTIYLDHQMKENEPIITMVHTMIENSALRPQLYQQFLRQKNKISLYCLSQDECRGTLYKYRPEEVDIDAKLSRLCEQDKVVHALEEKLQQLHKEKYTLEQALLSASQEIEMNADNPAAIQTVVLQRDDLQNGLLSTCRELSRATAELERAWREYDKLEYDVTVTRNQMQEQLDRLGEVQTESAGIQRAQIQKELWRIQDVMEGLSKHKQQRGSAETGMAGSKPFSTVKYKNEEEEVVPPRPPLPRSYDFTEQPPIIPPLPSDSSSLLCYSRGPVHLPEEKKIHQVQGYPRNGSHCGPDYRLYKSEPELTTVAEVDESNGEEKSEPVSEMESSVKGSHFPVGVVPPRTKSPTPESSTIASYVTLRKTKKMMDSRTERPRSAVEQLCLAESTRPRMTVEEQMERIRRHQQACLREKKKGLNVIGALDQSPLPSPSNLRDSLFRVTQTRRKDDNIKDTVVREPDAKPDPETPAAEVVLLKEAEPQNTDFSEEFKKTENVFSKTLFTPEPNGITSEDVMDKEESKEKMPEDVSYSSPPDESQITNHKPEGHPEENIKDDIRDQEETVISYELTPEASRGNQTMAVKSLSPSPESPASPVPSTQPQLTEGSHFMCV", "length": 1289, "header": "tr|A0A5G2QBB2-1|A0A5G2QBB2_PIG Isoform 1 of Pleckstrin homology domain containing A5 OS=Sus scrofa OX=9823 GN=PLEKHA5 PE=1 SV=1 CANONICAL=A0A5G2QBB2-1" }, "isoforms": [ { "isoform_ac": "A0A286ZR35-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR35/entry", "sequence": { "sequence": "MHNHNKPFWRSCLSCGCNDMLVRDVSLVADWQQWQASPAAPVYFLGAWSPQRSFGSSSKTKQWSQIFTPGSVFPVVECLFYKCDFDGACHNERKVTCKHPVTGQPSQDNCIFVVNEQTVATMTSEEKKERPISMINEASNYNMTSDYAVHPMSPVGRTSRSSKKVHNFGKRSNSIKRNPNAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIAMLTSEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAALVQTEPVKRITFNFRVDKITSENAPTKEINNFPNHRVLIKPETQNNQKNKEMSKTEEKKALEAEKYGFQKDGQDRPLTKINSVKLNSLSSEYESGSACPSQTGHYRPVNMNSSENKAVNVSLADLRGGSHPSTGPLHTEADRVIQRTNSMQQLEQWIKIQKGRGHEEETRGVISYQTLPRNMPSHRAQIVARYPEGYRTLPRNSKARPESICSVTPSAHDKIAGPGAEEKRRSMRDDTMWQLYEWQQRQFYSKQGTLPRHSTLTSPKTMVNLADQTMHSIPTSPSHGSIAAYQGYSPQRTYRSEVSSPIQRGDVTIDRRHRGHHPKHVYVPDRRSMPAGLTLQSVSPQSLQGKTPEELTLLLIKLRRQQAELSSIREHTLAQLMQLKLEAHSPKNEILSHHLQRNTIYLDHQMKENEPIITMVHTMIENSALRPQLYQQLSQDECRGTLYKYRPEEVDIDAKLSRLCEQDKVVHALEEKLQQLHKEKYTLEQALLSASQEIEMNADNPAAIQTVVLQRDDLQNGLLSTCRELSRATAELERAWREYDKLEYDVTVTRNQMQEQLDRLGEVQTESAGIQRAQIQKELWRIQDVMEGLSKHKQQRGSAETGMAGSKPFSTVKYKNEEEEVVPPRPPLPRSYDFTEQPPIIPPLPSDSSSLLCYSRGPVHLPEEKKIHQVQGYPRNGSHCGPDYRLYKSEPELTTVAEVDESNGEEKSEPVSEMESSVKGSHFPVGVVPPRTKSPTPESSTIASYVTLRKTKKMMDSRTERPRSAVEQLCLAESTRPRMTVEEQMERIRRHQQACLREKKKGLNVIGALDQSPLPSPSNLRDSLFRVTQTRRKDDNIKDTVVREPDAKPDPETPAAEVVLLKEAEPQNTDFSEEFKKTENVFSKTLFTPEPNGITSEDVMDKEESKEKMPEDVSYSSPPDESQITNHKPEGHPEENIKDDIRDQEETVISYELTPEASRGNQTMAVKSLSPSPESPASPVPSTQPQLTEGSHFMCV", "length": 1283, "header": "tr|A0A286ZR35-1|A0A5G2QBB2_PIG Computationally mapped isoform of Pleckstrin homology domain containing A5 OS=Sus scrofa OX=9823 GN=PLEKHA5 PE=1 SV=2 CANONICAL=A0A5G2QBB2-1" }, "locus": { "chromosome": "5", "start_pos": 53886760, "end_pos": 53763977, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037877.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037877.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033930.2", "url": "https://www.ensembl.org/id/ENSSSCP00000033930.2" } ] } }, { "isoform_ac": "A0A286ZYP0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZYP0/entry", "sequence": { "sequence": "MAADLNLEWICSLPRSWTYGITRGGRVFFINEEAKSTTWLHPVTGEAVVTGHRRQSTDLPTGWEEAYTFEGARYYINHNERKVTCKHPVTGQPSQDNCIFVVNEQTVATMTSEEKKERPISMINEASNYNMTSDYAVHPMSPVGRTSRSSKKVHNFGKRSNSIKRNPNAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIAMLTSEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAALVQTEPVKRVDKITSENAPTKEINNFPNHRVLIKPETQNNQKNKEMSKTEEKKALEAEKYGFQKDGQDRPLTKINSVKLNSLSSEYESGSACPSQTGHYRPVNMNSSENKAVNVSLADLRGGSHPSTGPLHTEADRVIQRTNSMQQLEQWIKIQKGRGHEEETRGVISYQTLPRNMPSHRAQIVARYPEGYRTLPRNSKARPESICSVTPSAHDKIAGPGAEEKRRSMRDDTMWQLYEWQQRQFYSKQGTLPRHSTLTSPKTMVNLADQTMHSIPTSPSHGSIAAYQGYSPQRTYRSEVSSPIQRGDVTIDRRHRGHHPKHVYVPDRRSMPAGLTLQSVSPQSLQGKTMKENEPIITMVHTMIENSALRPQLYQQLSQDECRGTLYKYRPEEVDIDAKLSRLCEQDKVVHALEEKLQQLHKEKYTLEQALLSASQEIEMNADNPAAIQTVVLQRDDLQNGLLSTCRELSRATAELERAWREYDKLEYDVTVTRNQMQEQLDRLGEVQTESAGIQRAQIQKELWRIQDVMEGLSKHKQQRGSAETGMAGSKPFSTVKYKNEEEEVVPPRPPLPRSYDFTEQPPIIPPLPSDSSSLLCYSRGPVHLPEEKKIHQVQGYPRNGSHCGPDYRLYKSEPELTTVAEVDESNGEEKSEPVSEMESSVKGSHFPVGVVPPRTKSPTPESSTIASYVTLRKTKKMMDSRTERPRSAVEQLCLAESTRPRMTVEEQMERIRRHQQACLREKKKGLNVIGALDQSPLPSPSNLRDSLFRVTQTRRKDDNIKDTVVREPDAKPDPETPAAEVVLLKEAEPQNTDFSEEFKKTENVFSKTLFTPEPNGITSEDVMDKEESKEKMPEDVSYSPPDESQITNHKPEGHPEENIKDDIRDQEETVISYELTPEASRGNQTMAVKSLSPSPESPASPVPSTQPQLTEGSHFMCV", "length": 1206, "header": "tr|A0A286ZYP0-1|A0A5G2QBB2_PIG Computationally mapped isoform of Pleckstrin homology domain containing A5 OS=Sus scrofa OX=9823 GN=PLEKHA5 PE=1 SV=3 CANONICAL=A0A5G2QBB2-1" }, "locus": { "chromosome": "5", "start_pos": 54016782, "end_pos": 53763977, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041180.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041180.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036627.3", "url": "https://www.ensembl.org/id/ENSSSCP00000036627.3" } ] } }, { "isoform_ac": "A0A287B0I1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B0I1/entry", "sequence": { "sequence": "MAADLNLEWICSLPRSWTYGITRGGRVFFINEEAKSTTWLHPVTGEAVVTGHRRQSTDLPTGWEEAYTFEGARYYINHNERKVTCKHPVTGQPSQDNCIFVVNEQTVATMTSEEKKERPISMINEASNYNMTSDYAVHPMSPVGRTSRSSKKVHNFGKRSNSIKRNPNAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIAMLTSEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAALVQTEPVKRVDKITSENAPTKEINNFPNHRVLIKPETQNNQKNKEMSKTEEKKALEAEKYGFQKDGQDRPLTKINSVKLNSLSSEYESGSACPSQTGHYRPVNMNSSENKAVNVSLADLRGGSHPSTGPLHTEADRVIQRTNSMQQLEQWIKIQKGRGHEEETRGVISYQTLPRNMPSHRAQIVARYPEGYRTLPRNSKARPESICSVTPSAHDKIAGPGAEEKRRSMRDDTMWQLYEWQQRQFYSKQGTLPRHSTLTSPKTMVNLADQTMHSIPTSPSHGSIAAYQGYSPQRTYRSEVSSPIQRGDVTIDRRHRGHHPKHVYVPDRRSMPAGLTLQSVSPQSLQGKTPEELTLLLIKLRRQQAELSSIREHTLAQLMQLKLEAHSPKNEILSHHLQRNTIYLDHQLSQDECRGTLYKYRPEEVDIDAKLSRLCEQDKVVHALEEKLQQLHKEKYTLEQALLSASQEIEMNADNPAAIQTVVLQRDDLQNGLLSTCRELSRATAELERAWREYDKLEYDVTVTRNQMQEQLDRLGEVQTESAGIQRAQIQKELWRIQDVMEGLSKHKQQRGSAETGMAGSKPFSTVKYKNEGPDYRLYKSEPELTTVAEVDESNGEEKSEPVSEMESSVKERPRSAVEQLCLAESTRPRMTVEEQMERIRRHQQACLREKKKGLNVIGALDQSPLPSPSNLRDSLFRVTQTRRKDDNIKDTVVREPDAKPDPETPAAEVVLLKEAEPQNTDFSEEFKKTENVFSKTLFTPEPNGITSEDVMDKEESKEKMPEDVSYSPPDESQITNHKPEGHPEENIKDDIRDQEETVISYELTPEASRGNQTMAVKSLSPSPESPASPVPSTQPQLTEGSHFMCV", "length": 1134, "header": "tr|A0A287B0I1-1|A0A5G2QBB2_PIG Computationally mapped isoform of Pleckstrin homology domain containing A5 OS=Sus scrofa OX=9823 GN=PLEKHA5 PE=1 SV=3 CANONICAL=A0A5G2QBB2-1" }, "locus": { "chromosome": "5", "start_pos": 54016782, "end_pos": 53763977, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059158.3", "url": "https://www.ensembl.org/id/ENSSSCT00000059158.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049923.3", "url": "https://www.ensembl.org/id/ENSSSCP00000049923.3" } ] } }, { "isoform_ac": "A0A287BJU9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BJU9/entry", "sequence": { "sequence": "MAADLNLEWICSLPRSWTYGITRGGRVFFINEEAKSTTWLHPVTGEAVVTGHRRQSTDLPTGWEEAYTFEGARYYINHNERKVTCKHPVTGQPSQDNCIFVVNEQTVATMTSEEKKERPISMINEASNYNMTSDYAVHPMSPVGRTSRSSKKVHNFGKRSNSIKRNPNAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIAMLTSEDHINRKYAFKPLLLLSLLVLMLLLLQ", "length": 254, "header": "tr|A0A287BJU9-1|A0A287BJU9_PIG Computationally mapped isoform of Pleckstrin homology domain containing A5 OS=Sus scrofa OX=9823 GN=PLEKHA5 PE=4 SV=3 CANONICAL=A0A5G2QBB2-1" }, "locus": { "chromosome": "5", "start_pos": 54016782, "end_pos": 53845505, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055577.3", "url": "https://www.ensembl.org/id/ENSSSCT00000055577.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056433.3", "url": "https://www.ensembl.org/id/ENSSSCP00000056433.3" } ] } }, { "isoform_ac": "A0A287BLI4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BLI4/entry", "sequence": { "sequence": "MHNHNKPFWRSCLSCGCNDMLVRDVSLVADWQQWQASPAAPVYFLGAWSPQRSFGSSSKTKQWSQIFTPGSVFPVVECLFYKCDFDGACHNERKVTCKHPVTGQPSQDNCIFVVNEQTVATMTSEEKKERPISMINEASNYNMTSDYAVHPMSPVGRTSRSSKKVHNFGKRSNSIKRNPNAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIAMLTSEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAALVQTEPVKRITFNFRVDKITSENAPTKEINNFPNHRVLIKPETQNNQKNKEMSKTEEKKALEAEKYGFQKDGQDRPLTKINSVKLNSLSSEYESGSACPSQTGHYRPVNMNSSENKAVNVSLADLRGGSHPSTGPLHTEADRVIQRTNSMQQLEQWIKIQKGRGHEEETRGVISYQTLPRNMPSHRAQIVARYPEGYRTLPRNSKARPESICSVTPSAHDKIAGPGAEEKRRSMRDDTMWQLYEWQQRQFYSKQGTLPRHSTLTSPKTMVNLADQTMHSIPTSPSHGSIAAYQGYSPQRTYRSEVSSPIQRGDVTIDRRHRGHHPKHVYVPDRRSMPAGLTLQSVSPQSLQGKTPEELTLLLIKLRRQQAELSSIREHTLAQLMQLKLEAHSPKNEILSHHLQRNTIYLDHQMKENEPIITMVHTMIENSALRPQLYQQLSQDECRGTLYKYRPEEVDIDAKLSRLCEQDKVVHALEEKLQQLHKEKYTLEQALLSASQEIEMNADNPAAIQTVVLQRDDLQNGLLSTCRELSRATAELERAWREYDKLEYDVTVTRNQMQEQLDRLGEVQTESAGIQRAQIQKELWRIQDVMEGLSKHKQQRGSAETGMAGSKPFSTVKYKNEEEEVVPPRPPLPRSYDFTEQPPIIPPLPSDSSSLLCYSRGPVHLPEEKKIHQVQGYPRNGSHCGPDYRLYKSEPELTTVAEVDESNGEEKSEPVSEMESSVKGSHFPVGVVPPRTKSPTPESSTIASYVTLRKTKKMMDSRTERPRSAVEQLCLAESTRPRMTVEEQMERIRRHQQACLREKKKGLNVIGALDQSPLPSPSNLRDSLFRVTQTRRKDDNIKDTVVREPDAKPDPETPAAEVVLLKEAEPQNTDFSEEFKKTENVFSKTLFTPEPNGITSEDVMDKEESKEKMPEDVSYSSPPDESQITNHKPEGHPEENIKDDIRDQEETVISYELTPEASRGNQTMAVPSNPFSSPTPLPLSHLAGGKYNEI", "length": 1277, "header": "tr|A0A287BLI4-1|A0A287BLI4_PIG Computationally mapped isoform of Pleckstrin homology domain containing A5 OS=Sus scrofa OX=9823 GN=PLEKHA5 PE=1 SV=3 CANONICAL=A0A5G2QBB2-1" }, "locus": { "chromosome": "5", "start_pos": 53886760, "end_pos": 53764694, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060287.3", "url": "https://www.ensembl.org/id/ENSSSCT00000060287.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057376.3", "url": "https://www.ensembl.org/id/ENSSSCP00000057376.3" } ] } }, { "isoform_ac": "A0A5G2QBB2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBB2/entry", "sequence": { "sequence": "MHNHNKPFWRSCLSCGCNDMLVRDVSLVADWQQWQASPAAPVYFLGAWSPQRSFGSSSKTKQWSQIFTPGSVFPVVECLFYKCDFDGACHNERKVTCKHPVTGQPSQDNCIFVVNEQTVATMTSEEKKERPISMINEASNYNMTSDYAVHPMSPVGRTSRSSKKVHNFGKRSNSIKRNPNAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIAMLTSEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAALVQTEPVKRVDKITSENAPTKEINNFPNHRVLIKPETQNNQKNKEMSKTEEKKALEAEKYGFQKDGQDRPLTKINSVKLNSLSSEYESGSACPSQTGHYRPVNMNSSENKAVNVSLADLRGGSHPSTGPLHTEADRVIQRTNSMQQLEQWIKIQKGRGHEEETRGVISYQTLPRNMPSHRAQIVARYPEGYRTLPRNSKARPESICSVTPSAHDKIAGPGAEEKRRSMRDDTMWQLYEWQQRQFYSKQGTLPRHSTLTSPKTMVNLADQTMHSIPTSPSHGSIAAYQGYSPQRTYRSEVSSPIQRGDVTIDRRHRGHHPKHVYVPDRRSMPAGLTLQSVSPQSLQGKTPEELTLLLIKLRRQQAELSSIREHTLAQLMQLKLEAHSPKNEILSHHLQRNTIYLDHQMKENEPIITMVHTMIENSALRPQLYQQFLRQKNKISLYCLSQDECRGTLYKYRPEEVDIDAKLSRLCEQDKVVHALEEKLQQLHKEKYTLEQALLSASQEIEMNADNPAAIQTVVLQRDDLQNGLLSTCRELSRATAELERAWREYDKLEYDVTVTRNQMQEQLDRLGEVQTESAGIQRAQIQKELWRIQDVMEGLSKHKQQRGSAETGMAGSKPFSTVKYKNEEEEVVPPRPPLPRSYDFTEQPPIIPPLPSDSSSLLCYSRGPVHLPEEKKIHQVQGYPRNGSHCGPDYRLYKSEPELTTVAEVDESNGEEKSEPVSEMESSVKGSHFPVGVVPPRTKSPTPESSTIASYVTLRKTKKMMDSRTERPRSAVEQLCLAESTRPRMTVEEQMERIRRHQQACLREKKKGLNVIGALDQSPLPSPSNLRDSLFRVTQTRRKDDNIKDTVVREPDAKPDPETPAAEVVLLKEAEPQNTDFSEEFKKTENVFSKTLFTPEPNGITSEDVMDKEESKEKMPEDVSYSSPPDESQITNHKPEGHPEENIKDDIRDQEETVISYELTPEASRGNQTMAVKSLSPSPESPASPVPSTQPQLTEGSHFMCV", "length": 1289, "header": "tr|A0A5G2QBB2-1|A0A5G2QBB2_PIG Isoform 1 of Pleckstrin homology domain containing A5 OS=Sus scrofa OX=9823 GN=PLEKHA5 PE=1 SV=1 CANONICAL=A0A5G2QBB2-1" }, "locus": { "chromosome": "5", "start_pos": 53886760, "end_pos": 53763977, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068430.2", "url": "https://www.ensembl.org/id/ENSSSCT00000068430.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060746.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060746.1" } ] } }, { "isoform_ac": "A0A5G2QWU0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWU0/entry", "sequence": { "sequence": "MHNHNKPFWRSCLSCGCNDMLVRDVSLVADWQQWQASPAAPVYFLGAWSPQRSFGSSSKTKQWSQIFTPGSVFPVVECLFYKCDFDGACHNERKVTCKHPVTGQPSQDNCIFVVNEQTVATMTSEEKKERPISMINEASNYNMTSDYAVHPMSPVGRTSRSSKKVHNFGKRSNSIKRNPNAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIAMLTSEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAALVQTEPVKRITFNFRVDKITSENAPTKEINNFPNHRVLIKPETQNNQKNKEMSKTEEKKALEAEKYGFQKDGQDRPLTKINSVKLNSLSSEYESGSACPSQTGHYRPVNMNSSENKAVNVSLADLRGGSHPSTGPLHTEADRVIQRTNSMQQLEQWIKIQKGRGHEEETRGVISYQTLPRNMPSHRAQIVARYPEGYRTLPRNSKARPESICSVTPSAHDKIAGPGAEEKRRSMRDDTMWQLYEWQQRQFYSKQGTLPRHSTLTSPKTMVNLADQTMHSIPTSPSHGSIAAYQGYSPQRTYRSEVSSPIQRGDVTIDRRHRGHHPKHVYVPDRRSMPAGLTLQSVSPQSLQGKTPEELTLLLIKLRRQQAELSSIREHTLAQLMQLKLEAHSPKNEILSHHLQRNTIYLDHQMKENEPIITMVHTMIENSALRPQLYQQFLRQKNKISLYCLSQDECRGTLYKYRPEEVDIDAKLSRLCEQDKVVHALEEKLQQLHKEKYTLEQALLSASQEIEMNADNPAAIQTVVLQRDDLQNGLLSTCRELSRATAELERAWREYDKLEYDVTVTRNQMQEQLDRLGEVQTESAGIQRAQIQKELWRIQDVMEGLSKHKQQRGSAETGMAGSKPFSTVKYKNEEEEVVPPRPPLPRSYDFTEQPPIIPPLPSDSSSLLCYSRGPVHLPEEKKIHQVQGYPRNGSHCGPDYRLYKSEPELTTVAEVDESNGEEKSEPVSEMESSVKGSHFPVGVVPPRTKSPTPESSTIASYVTLRKTKKMMDSRTERPRSAVEQLCLAESTRPRMTVEEQMERIRRHQQACLREKKKGLNVIGALDQSPLPSPSNLRDSLFRVTQTRRKDDNIKDTVVREPDAKPDPETPAAEVVLLKEAEPQNTDFSEEFKKTENVFSKTLFTPEPNGITSEDVMDKEESKEKMPEDVSYSSPPDESQITNHKPEGHPEENIKDDIRDQEETVISYELTPEASRGNQTMAAILTSVETTQSYGRGPLAM", "length": 1283, "header": "tr|A0A5G2QWU0-1|A0A5G2QBB2_PIG Computationally mapped isoform of Pleckstrin homology domain containing A5 OS=Sus scrofa OX=9823 GN=PLEKHA5 PE=1 SV=1 CANONICAL=A0A5G2QBB2-1" }, "locus": { "chromosome": "5", "start_pos": 53886760, "end_pos": 53761647, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089279.2", "url": "https://www.ensembl.org/id/ENSSSCT00000089279.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069414.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069414.1" } ] } }, { "isoform_ac": "F1SQZ2-1", "url": "https://www.uniprot.org/uniprotkb/F1SQZ2/entry", "sequence": { "sequence": "MDGRLELVSWFLSTWTSLPGYMALMTWHLALSRASNAGPREGPKGGGTKIHNERKVTCKHPVTGQPSQDNCIFVVNEQTVATMTSEEKKERPISMINEASNYNMTSDYAVHPMSPVGRTSRSSKKVHNFGKRSNSIKRNPNAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIAMLTSEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAALVQTEPVKRVDKITSENAPTKEINNFPNHRVLIKPETQNNQKNKEMSKTEEKKALEAEKYGFQKDGQDRPLTKINSVKLNSLSSEYESGSACPSQTGHYRPVNMNSSENKAVNVSLADLRGGSHPSTGPLHTEADRVIQRTNSMQQLEQWIKIQKGRGHEEETRGVISYQTLPRNMPSHRAQIVARYPEGYRTLPRNSKARPESICSVTPSAHDKIAGPGAEEKRRSMRDDTMWQLYEWQQRQFYSKQGTLPRHSTLTSPKTMVNLADQTMHSIPTSPSHGSIAAYQGYSPQRTYRSEVSSPIQRGDVTIDRRHRGHHPKHVYVPDRRSMPAGLTLQSVSPQSLQGKTLSQDECRGTLYKYRPEEVDIDAKLSRLCEQDKVVHALEEKLQQLHKEKYTLEQALLSASQEIEMNADNPAAIQTVVLQRDDLQNGLLSTCRELSRATAELERAWREYDKLEYDVTVTRNQMQEQLDRLGEVQTESAGIQRAQIQKELWRIQDVMEGLSKHKQQRGSAETGMAGSKPFSTVKYKNEGPDYRLYKSEPELTTVAEVDESNGEEKSEPVSEMESSVKGSHFPVGVVPPRTKSPTPESSTIASYVTLRKTKKMMDSRTERPRSAVEQLCLAESTRPRMTVEEQMERIRRHQQACLREKKKGLNVIGALDQSPLPSPSNLRDSLFRVTQTRRKDDNIKDTVVREPDAKPDPETPAAEVVLLKEAEPQNTDFSEEFKKTENVFSKTLFTPEPNGITSEDVMDKEESKEKMPEDVSYSSPPDESQITNHKPEGHPEENIKDDIRDQEETVISYELTPEASRGNQTMAVKSLSPSPESPASPVPSTQPQLTEGSHFMCV", "length": 1090, "header": "tr|F1SQZ2-1|A0A5G2QBB2_PIG Computationally mapped isoform of Pleckstrin homology domain containing A5 OS=Sus scrofa OX=9823 GN=PLEKHA5 PE=1 SV=5 CANONICAL=A0A5G2QBB2-1" }, "locus": { "chromosome": "5", "start_pos": 53940323, "end_pos": 53763977, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000633.5", "url": "https://www.ensembl.org/id/ENSSSCT00000000633.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000619.5", "url": "https://www.ensembl.org/id/ENSSSCP00000000619.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QWU0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWU0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-1660499", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1660499", "resource": "Reactome", "description": "Synthesis of PIPs at the plasma membrane" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBB2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBB2" } ], "pmid": "" }, { "name": "glutamatergic synapse", "id": "GO:0098978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098978", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBB2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBB2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBB2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBB2" } ], "pmid": "" }, { "name": "postsynaptic density", "id": "GO:0014069", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0014069", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBB2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBB2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "phosphatidylinositol-5-phosphate binding", "id": "GO:0010314", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010314", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBB2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBB2" } ], "pmid": "" }, { "name": "phosphatidylinositol-3,5-bisphosphate binding", "id": "GO:0080025", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080025", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBB2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBB2" } ], "pmid": "" }, { "name": "phosphatidylinositol-4-phosphate binding", "id": "GO:0070273", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070273", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBB2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBB2" } ], "pmid": "" }, { "name": "phosphatidylinositol-3-phosphate binding", "id": "GO:0032266", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032266", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBB2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBB2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1254, "end_pos": 1256, "annotation": "n_glycosylation_sequon" }, { "start_pos": 142, "end_pos": 144, "annotation": "n_glycosylation_sequon" }, { "start_pos": 385, "end_pos": 387, "annotation": "n_glycosylation_sequon" }, { "start_pos": 393, "end_pos": 395, "annotation": "n_glycosylation_sequon" }, { "start_pos": 969, "end_pos": 971, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QBB2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBB2" }, { "id": "PS50003", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50003" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PH", "eco_id": "ECO_0000259", "start_pos": 182, "end_pos": 281, "start_aa": "Pro", "end_aa": "Leu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1254, "end_pos": 1256 }, { "start_pos": 142, "end_pos": 144 }, { "start_pos": 385, "end_pos": 387 }, { "start_pos": 393, "end_pos": 395 }, { "start_pos": 969, "end_pos": 971 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QEP3-1", "uniprot_ac": "A0A5G2QEP3", "uniprot_id": "A0A5G2QEP3_PIG", "mass": { "chemical_mass": 64537.0, "monoisotopic_mass": 64537.0 }, "refseq": {}, "gene_names": [ { "name": "ICA1", "type": "recommended", "evidence": [ { "id": "A0A5G2QEP3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEP3" } ] } ], "protein_names": [ { "name": "Islet cell autoantigen 1", "type": "synonym", "evidence": [ { "id": "A0A5G2QEP3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEP3/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEP3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEP3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ICA1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEP3", "locus": { "chromosome": "9", "start_pos": 78332393, "end_pos": 78515087, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015346", "url": "https://www.ensembl.org/id/ENSSSCG00000015346" } ] } } ], "crossref": [ { "id": "A0A5G2QEP3", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QEP3", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000015346", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015346", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07661", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07661", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100511342", "url": "https://www.ncbi.nlm.nih.gov/gene/100511342", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006723", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006723", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR010504", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010504", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR024114", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024114", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027267", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027267", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100511342", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511342", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FGPFMDF", "url": "https://omabrowser.org/oma/group/FGPFMDF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LA26", "url": "https://www.orthodb.org/?gene=I3LA26", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10164", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10164", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10164:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10164:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04629", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04629", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF06456", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06456", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZR48", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR48", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZR48-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR48-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TQR3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TQR3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TQR3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TQR3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QEP3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEP3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QEP3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEP3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QV74", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QV74", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QV74-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QV74-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0Z5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0Z5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0Z5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0Z5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1KR25", "url": "https://www.uniprot.org/uniprotkb/A0A8D1KR25", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1KR25-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1KR25-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SF69", "url": "https://www.uniprot.org/uniprotkb/F1SF69", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SF69-1", "url": "https://www.uniprot.org/uniprotkb/F1SF69-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LA26", "url": "https://www.uniprot.org/uniprotkb/I3LA26", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LA26-1", "url": "https://www.uniprot.org/uniprotkb/I3LA26-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLPQMALFCSFLWLSSIPLIHSSVNGYLGCFHVLAIVNSAAMNIEVHVSFGIILLSGYMPRSGIAGSHGNSHLSFLRNLHTVCHSGYTKKPHKKVFKCSYPWDLQDRYAQDKSVVNKMQQKYWETKQAFIKATGKKEDEHVVASDADLDAKLELFHSIQRTCLDLSKAIVLYQKRICFLSQEENELGKFLRSQGFQDKTRAGKMMQATGKALCFSSQQRLALRNPLCRFHQEVETFRHRAISDTWLTVNRMEQCRTEYRGALLWMKDVSQELDPDLYKQMEKFRKVQTQVRLAKKSFDKLKMDVCQKVDLLGASRCNLLSHMLATYQTTLLHFWEKTSHTMAAIHESFKGYQPYEFTTLKSLQDPMKKLVEKEERKRITQQESAEVTAEEPSQLISLEDENQHKESSSFKTEDGKSVLSALDKSSTHGVCSEELLDMKPEEGACLGPMAGTPEPEGADKDDLLLLSEIFNASSLEEGEFSQEWAAVFGDGRLKEAAPTVAPGEPDPKPQTGSGFLPSQLLDQNMKDLQASLQEPAKATSDLTAWFSLFADLDPLSNPDAVGKTDKEHELLNA", "length": 572, "header": "tr|A0A5G2QEP3-1|A0A5G2QEP3_PIG Isoform 1 of Islet cell autoantigen 1 OS=Sus scrofa OX=9823 GN=ICA1 PE=1 SV=1 CANONICAL=A0A5G2QEP3-1" }, "isoforms": [ { "isoform_ac": "A0A286ZR48-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR48/entry", "sequence": { "sequence": "MSGHKCSYPWDLQDRYAQDKSVVNKMQQKYWETKQAFIKATGKKEDEHVVASDADLDAKLELFHSIQRTCLDLSKAIVLYQKRICFLSQEENELGKFLRSQGFQDKTRAGKMMQATGKALCFSSQQRLALRNPLCRFHQEVETFRHRAISDTWLTVNRMEQCRTEYRGALLWMKDVSQELDPDLYKQMEKFRKVQTQVRLAKKSFDKLKMDVCQKVDLLGASRCNLLSHMLATYQTTLLHFWEKTSHTMAAIHESFKGYQPYEFTTLKSLQDPMKKLVEKEERKRITQQESAEVTAEEPSQLISLEDENQHKESSSFKTEDGKSVLSALDKSSTHGVCSEELLDMKPEEGACLGPMAGTPEPEGADKDDLLLLSEIFNASSLEEGEFSQEWAAVFGDGRLKEAAPTVAPGEPDPKPQTGSGFLPSQLLDQNMKDLQASLQEPAKATSDLTAWFSLFADLDPLSNPDAVGKTDKEHELLNARLRTAPELQVRNSVSTEHCLFPGLNLSLSGKRLTAQSFQKHM", "length": 522, "header": "tr|A0A286ZR48-1|A0A5G2QEP3_PIG Computationally mapped isoform of Islet cell autoantigen 1 OS=Sus scrofa OX=9823 GN=ICA1 PE=1 SV=2 CANONICAL=A0A5G2QEP3-1" }, "locus": { "chromosome": "9", "start_pos": 78493104, "end_pos": 78334093, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043777.3", "url": "https://www.ensembl.org/id/ENSSSCT00000043777.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034053.2", "url": "https://www.ensembl.org/id/ENSSSCP00000034053.2" } ] } }, { "isoform_ac": "A0A4X1TQR3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TQR3/entry", "sequence": { "sequence": "MSGHKCSYPWDLQDRYAQDKSVVNKMQQKYWETKQAFIKATGKKEDEHVVASDADLDAKLELFHSIQRTCLDLSKAIVLYQKRICFLSQEENELGKFLRSQGFQDKTRAGKMMQATGKALCFSSQQRLALRNPLCRFHQEVETFRHRAISDTWLTVNRMEQCRTEYRGALLWMKDVSQELDPDLYKQMEKFRKVQTQVRLAKKSFDKLKMDVCQKVDLLGASRCNLLSHMLATYQTTLLHFWEKTSHTMAAIHESFKGYQPYEFTTLKSLQDPMKKLVEKEERKRITQQESAEVTAEEPSQYLDMCLTMKPTSDVKILLTSLRTGTGESQQISVLISLEDENQHKESSSFKTEDGKSVLSALDKSSTHGVCSESTEELLDMKPEEGACLGPMAGTPEPEGADKDDLLLLSEIFNASSLEEGEFSQEWAAVFGDGRLKEAAPTVAPGEPDPKPQTGSGFLPSQLLDQNMKDLQASLQEPAKATSDLTAWFSLFADLDPLSNPDAVGKTDKEHELLNA", "length": 516, "header": "tr|A0A4X1TQR3-1|A0A4X1TQR3_PIG Computationally mapped isoform of Islet cell autoantigen 1 OS=Sus scrofa OX=9823 GN=ICA1 PE=1 SV=1 CANONICAL=A0A5G2QEP3-1" }, "locus": { "chromosome": "9", "start_pos": 78493104, "end_pos": 78365203, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088044.1", "url": "https://www.ensembl.org/id/ENSSSCT00000088044.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062406.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062406.1" } ] } }, { "isoform_ac": "A0A5G2QEP3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEP3/entry", "sequence": { "sequence": "MLPQMALFCSFLWLSSIPLIHSSVNGYLGCFHVLAIVNSAAMNIEVHVSFGIILLSGYMPRSGIAGSHGNSHLSFLRNLHTVCHSGYTKKPHKKVFKCSYPWDLQDRYAQDKSVVNKMQQKYWETKQAFIKATGKKEDEHVVASDADLDAKLELFHSIQRTCLDLSKAIVLYQKRICFLSQEENELGKFLRSQGFQDKTRAGKMMQATGKALCFSSQQRLALRNPLCRFHQEVETFRHRAISDTWLTVNRMEQCRTEYRGALLWMKDVSQELDPDLYKQMEKFRKVQTQVRLAKKSFDKLKMDVCQKVDLLGASRCNLLSHMLATYQTTLLHFWEKTSHTMAAIHESFKGYQPYEFTTLKSLQDPMKKLVEKEERKRITQQESAEVTAEEPSQLISLEDENQHKESSSFKTEDGKSVLSALDKSSTHGVCSEELLDMKPEEGACLGPMAGTPEPEGADKDDLLLLSEIFNASSLEEGEFSQEWAAVFGDGRLKEAAPTVAPGEPDPKPQTGSGFLPSQLLDQNMKDLQASLQEPAKATSDLTAWFSLFADLDPLSNPDAVGKTDKEHELLNA", "length": 572, "header": "tr|A0A5G2QEP3-1|A0A5G2QEP3_PIG Isoform 1 of Islet cell autoantigen 1 OS=Sus scrofa OX=9823 GN=ICA1 PE=1 SV=1 CANONICAL=A0A5G2QEP3-1" }, "locus": { "chromosome": "9", "start_pos": 78487799, "end_pos": 78365203, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090494.1", "url": "https://www.ensembl.org/id/ENSSSCT00000090494.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063161.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063161.1" } ] } }, { "isoform_ac": "A0A5G2QV74-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QV74/entry", "sequence": { "sequence": "MALQMLFSSYPWDLQDRYAQDKSVVNKMQQKYWETKQAFIKATGKKEDEHVVASDADLDAKLELFHSIQRTCLDLSKAIVLYQKRICFLSQEENELGKFLRSQGFQDKTRAGKMMQATGKALCFSSQQRLALRNPLCRFHQEVETFRHRAISDTWLTVNRMEQCRTEYRGALLWMKDVSQELDPDLYKQMEKFRKVQTQVRLAKKSFDKLKMDVCQKVDLLGASRCNLLSHMLATYQTTLLHFWEKTSHTMAAIHESFKGYQPYEFTTLKSLQDPMKKLVEKEERKRITQQEISASSLAEDGKSVLSALDKSSTHGVCSEELLDMKPEEGACLGPMAGTPEPEGADKDDLLLLSEIFNASSLEEGEFSQEWAAVFGDGRLKEAAPTVAPGEPDPKPQTGSGFLPSQLLDQNMKDLQASLQGWSESKVNPAPPPWPAPQASSPSGSSPAVKEPAKATSDLTAWFSLFADLDPLSNPDAVGKTDKEHELLNA", "length": 490, "header": "tr|A0A5G2QV74-1|A0A5G2QEP3_PIG Computationally mapped isoform of Islet cell autoantigen 1 OS=Sus scrofa OX=9823 GN=ICA1 PE=1 SV=2 CANONICAL=A0A5G2QEP3-1" }, "locus": { "chromosome": "9", "start_pos": 78487372, "end_pos": 78365203, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089040.2", "url": "https://www.ensembl.org/id/ENSSSCT00000089040.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068871.2", "url": "https://www.ensembl.org/id/ENSSSCP00000068871.2" } ] } }, { "isoform_ac": "A0A5G2R0Z5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0Z5/entry", "sequence": { "sequence": "MALQMLFSSYPWDLQDRYAQDKSVVNKMQQKYWETKQAFIKATGKKEDEHVVASDADLDAKLELFHSIQRTCLDLSKAIVLYQKRICFLSQEENELGKFLRSQGFQDKTRAGKMMQATGKALCFSSQQRLALRNPLCRFHQEVETFRHRAISDTWLTVNRMEQCRTEYRGALLWMKDVSQELDPDLYKQMEKFRKVQTQVRLAKKSFDKLKMDVCQKVDLLGASRCNLLSHMLATYQTTLLHFWEKTSHTMAAIHESFKGYQPYEFTTLKSLQDPMKKLVEKEERKRITQQESAEVTDMCLTMKPTSDVKILLTSLRTGTGESQLISLEDENQHKESSSFKTEDGKSVLSALDKSSTHGVCSEELLDMKPEEGACLGPMAGTPEPEGADKDDLLLLSEIFNASSLEEGEFSQEWAAVFGDGRLKEAAPTVAPGEPDPKPQTGSGFLPSQLLDQNMKDLQASLQEPAKATSDLTAWFSLFADLDPLSNPDAVGKTDKEHELLNA", "length": 503, "header": "tr|A0A5G2R0Z5-1|A0A5G2QEP3_PIG Computationally mapped isoform of Islet cell autoantigen 1 OS=Sus scrofa OX=9823 GN=ICA1 PE=1 SV=1 CANONICAL=A0A5G2QEP3-1" }, "locus": { "chromosome": "9", "start_pos": 78487372, "end_pos": 78365203, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067147.2", "url": "https://www.ensembl.org/id/ENSSSCT00000067147.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070783.2", "url": "https://www.ensembl.org/id/ENSSSCP00000070783.2" } ] } }, { "isoform_ac": "A0A8D1KR25-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1KR25/entry", "sequence": { "sequence": "MSGHKCSYPWDLQDRYAQDKSVVNKMQQKYWETKQAFIKATGKKEDEHVVASDADLDAKLELFHSIQRTCLDLSKAIVLYQKRICFLSQEENELGKFLRSQGFQDKTRAGKMMQATGKALCFSSQQRLALRNPLCRFHQEVETFRHRAISDTWLTVNRMEQCRTEYRGALLWMKDVSQELDPDLYKQMEKFRKVQTQVRLAKKSFDKLKMDVCQKVDLLGASRCNLLSHMLATYQTTLLHFWEKTSHTMAAIHESFKGYQPYEFTTLKSLQDPMKKLVEKEERKRITQQESAEVTAEEPSQLISLEDENQHKESSSFKTEDGKSVLSALDKSSTHGVCSEELLDMKPEEGACLGPMAGTPEPEGADKDDLLLLSEIFNASSLEEGEFSQEWAAVFGDGRLKEAAPTVAPGEPDPKPQTGSGFLPSQLLDQNMKDLQASLQGSLWKYGPP", "length": 449, "header": "tr|A0A8D1KR25-1|A0A5G2QEP3_PIG Computationally mapped isoform of Islet cell autoantigen 1 OS=Sus scrofa OX=9823 GN=ICA1 PE=1 SV=1 CANONICAL=A0A5G2QEP3-1" }, "locus": { "chromosome": "9", "start_pos": 78493104, "end_pos": 78370638, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082777.1", "url": "https://www.ensembl.org/id/ENSSSCT00000082777.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067295.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067295.1" } ] } }, { "isoform_ac": "F1SF69-1", "url": "https://www.uniprot.org/uniprotkb/F1SF69/entry", "sequence": { "sequence": "MALQMLFSSYPWDLQDRYAQDKSVVNKMQQKYWETKQAFIKATGKKEDEHVVASDADLDAKLELFHSIQRTCLDLSKAIVLYQKRICFLSQEENELGKFLRSQGFQDKTRAGKMMQATGKALCFSSQQRLALRNPLCRFHQEVETFRHRAISDTWLTVNRMEQCRTEYRGALLWMKDVSQELDPDLYKQMEKFRKVQTQVRLAKKSFDKLKMDVCQKVDLLGASRCNLLSHMLATYQTTLLHFWEKTSHTMAAIHESFKGYQPYEFTTLKSLQDPMKKLVEKEERKRITQQESAEVTAEEPNGKSVLSALDKSSTHGVCSEELLDMKPEEGACLGPMAGTPEPEGADKDDLLLLSEIFNASSLEEGEFSQEWAAVFGDGRLKEAAPTVAPGEPDPKPQTGSGFLPSQLLDQNMKDLQASLQGMYYKDWNERFVCVSSSF", "length": 439, "header": "tr|F1SF69-1|A0A5G2QEP3_PIG Computationally mapped isoform of Islet cell autoantigen 1 OS=Sus scrofa OX=9823 GN=ICA1 PE=1 SV=4 CANONICAL=A0A5G2QEP3-1" }, "locus": { "chromosome": "9", "start_pos": 78487372, "end_pos": 78378823, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016719.5", "url": "https://www.ensembl.org/id/ENSSSCT00000016719.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016273.5", "url": "https://www.ensembl.org/id/ENSSSCP00000016273.5" } ] } }, { "isoform_ac": "I3LA26-1", "url": "https://www.uniprot.org/uniprotkb/I3LA26/entry", "sequence": { "sequence": "MSGHKCSYPWDLQDRYAQDKSVVNKMQQKYWETKQAFIKATGKKEDEHVVASDADLDAKLELFHSIQRTCLDLSKAIVLYQKRICFLSQEENELGKFLRSQGFQDKTRAGKMMQATGKALCFSSQQRLALRNPLCRFHQEVETFRHRAISDTWLTVNRMEQCRTEYRGALLWMKDVSQELDPDLYKQMEKFRKVQTQVRLAKKSFDKLKMDVCQKVDLLGASRCNLLSHMLATYQTTLLHFWEKTSHTMAAIHESFKGYQPYEFTTLKSLQDPMKKLVEKEERKRITQQESAEVTAEEPSQLISLEDENQHKESSSFKTEDGKSVLSALDKSSTHGVCSEELLDMKPEEGACLGPMAGTPEPEGADKDDLLLLSEIFNASSLEEGEFSQEWAAVFGDGRLKEAAPTVAPGEPDPKPQTGSGFLPSQLLDQNMKDLQASLQGWSESKVNPAPPPWPAPQASSPSGSSPAVKEPAKATSDLTAWFSLFADLDPLSNPDAVGKTDKEHELLNA", "length": 510, "header": "tr|I3LA26-1|A0A5G2QEP3_PIG Computationally mapped isoform of Islet cell autoantigen 1 OS=Sus scrofa OX=9823 GN=ICA1 PE=1 SV=2 CANONICAL=A0A5G2QEP3-1" }, "locus": { "chromosome": "9", "start_pos": 78493104, "end_pos": 78365203, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028023.3", "url": "https://www.ensembl.org/id/ENSSSCT00000028023.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020892.2", "url": "https://www.ensembl.org/id/ENSSSCP00000020892.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QV74", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QV74" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100511342", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511342", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q05084-1", "protein_name": "Islet cell autoantigen 1", "gene_name": "ICA1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSGHKCSYPWDLQDRYAQDKSVVNKMQQKYWETKQAFIKATGKKEDEHVVASDADLDAKLELFHSIQRTCLDLSKAIVLYQKRICFLSQEENELGKFLRSQGFQDKTRAGKMMQATGKALCFSSQQRLALRNPLCRFHQEVETFRHRAISDTWLTVNRMEQCRTEYRGALLWMKDVSQELDPDLYKQMEKFRKVQTQVRLAKKNFDKLKMDVCQKVDLLGASRCNLLSHMLATYQTTLLHFWEKTSHTMAAIHESFKGYQPYEFTTLKSLQDPMKKLVEKEEKKKINQQESTDAAVQEPSQLISLEEENQRKESSSFKTEDGKSILSALDKGSTHTACSGPIDELLDMKSEEGACLGPVAGTPEPEGADKDDLLLLSEIFNASSLEEGEFSKEWAAVFGDGQVKEPVPTMALGEPDPKAQTGSGFLPSQLLDQNMKDLQASLQEPAKAASDLTAWFSLFADLDPLSNPDAVGKTDKEHELLNA", "length": 483 }, "evidence": [ { "id": "A0A5G2QEP3", "url": "https://omabrowser.org/oma/group/A0A5G2QEP3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q63054-1", "protein_name": "Islet cell autoantigen 1", "gene_name": "Ica1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSGHKCYSWELQDRFAQDKSVVNKMQQKYWETKQAFIKATGKKEDEHVVASDADLDAKLELFHSIQRTCLDLSKAIVLYQKRICFLSQEENELGKFLRSQGFQDKTRAGKMMQATGKALCFSSQQRLALRNPLCRFHQEVETFRHRAISDTWLTVNRMEQCRTEYRGALLWMKDVSQELDPDLYKQMEKFRKVQTQVRLAKKNFDKLKMDVCQKVDLLGASRCNLLSHMLATYQTTLLHFWEKTSHTMAAIHESFKGYQPYEFTTLKSLQDPMKKLVEKEKKKSSRRENREAVAQEPRQLISLEEENQHKESSTCQKEEGKSVPSSVDKSSADDACSGPIDELLDVKPEEACLGPMAGTPEPESGDKDDLLLLNEIFSTSSLDEGEFSREWAAVFGDDRLKEPAPMGAQGEPDPKPQIGSAFLPSQLLDQNMKDLQASLQEPAKAASDLTAWFSLFADLDPLSNPDAIGKTDKEHELLNA", "length": 480 }, "evidence": [ { "id": "A0A5G2QEP3", "url": "https://omabrowser.org/oma/group/A0A5G2QEP3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEP3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEP3" } ], "pmid": "" }, { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEP3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEP3" } ], "pmid": "" }, { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEP3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEP3" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEP3", "url": 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"database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR034827", "url": "https://www.ebi.ac.uk/interpro/entry/IPR034827", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR034830", "url": "https://www.ebi.ac.uk/interpro/entry/IPR034830", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035979", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035979", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "VRIFKMQ", "url": "https://omabrowser.org/oma/group/VRIFKMQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR10352", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10352", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00076", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00076", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020943059", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020943059", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287A0R0", "url": "https://www.uniprot.org/uniprotkb/A0A287A0R0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A0R0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A0R0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W9E0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W9E0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W9E0-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W9E0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W9V2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W9V2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W9V2-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W9V2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQAWNQQGFNQTQSSAPWMGPNYGVQPPPGQNGSMMPSQPAGYRVAGYETQ", "length": 386, "header": "tr|A0A4X1W9V2-1|A0A4X1W9V2_PIG Isoform 1 of Cytotoxic granule associated RNA binding protein TIA1 OS=Sus scrofa OX=9823 GN=TIA1 PE=4 SV=1 CANONICAL=A0A4X1W9V2-1" }, "isoforms": [ { "isoform_ac": "A0A287A0R0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A0R0/entry", "sequence": { "sequence": "MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQAWNQQGFNQTQSSAPWMGPNYGVQPPPGQNGSMMPSQPAGYRVAGYETQ", "length": 375, "header": "tr|A0A287A0R0-1|A0A4X1W9V2_PIG Computationally mapped isoform of Cytotoxic granule associated RNA binding protein TIA1 OS=Sus scrofa OX=9823 GN=TIA1 PE=4 SV=2 CANONICAL=A0A4X1W9V2-1" }, "locus": { "chromosome": "3", "start_pos": 72271807, "end_pos": 72240824, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060792.3", "url": "https://www.ensembl.org/id/ENSSSCT00000060792.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037509.2", "url": "https://www.ensembl.org/id/ENSSSCP00000037509.2" } ] } }, { "isoform_ac": "A0A4X1W9E0-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W9E0/entry", "sequence": { "sequence": "MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRQTQSSAPWMGPNYGVQPPPGQNGSMMPSQPAGYRVAGYETQ", "length": 285, "header": "tr|A0A4X1W9E0-1|A0A4X1W9V2_PIG Computationally mapped isoform of Cytotoxic granule associated RNA binding protein TIA1 OS=Sus scrofa OX=9823 GN=TIA1 PE=4 SV=1 CANONICAL=A0A4X1W9V2-1" }, "locus": { "chromosome": "3", "start_pos": 72271807, "end_pos": 72240824, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041698.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041698.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033299.2", "url": "https://www.ensembl.org/id/ENSSSCP00000033299.2" } ] } }, { "isoform_ac": "A0A4X1W9V2-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W9V2/entry", "sequence": { "sequence": "MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQAWNQQGFNQTQSSAPWMGPNYGVQPPPGQNGSMMPSQPAGYRVAGYETQ", "length": 386, "header": "tr|A0A4X1W9V2-1|A0A4X1W9V2_PIG Isoform 1 of Cytotoxic granule associated RNA binding protein TIA1 OS=Sus scrofa OX=9823 GN=TIA1 PE=4 SV=1 CANONICAL=A0A4X1W9V2-1" }, "locus": { "chromosome": "3", "start_pos": 72271807, "end_pos": 72240824, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027073.3", "url": "https://www.ensembl.org/id/ENSSSCT00000027073.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000026866.3", "url": "https://www.ensembl.org/id/ENSSSCP00000026866.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W9E0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W9E0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6AQH6-1", "protein_name": "Cytotoxic granule associated RNA binding protein TIA1", "gene_name": "Tia1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDQTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPGNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPPAYGQWGQWYGNAQQIGQYVPNGWQVPAYGMYGQPWSQQGFNQTQSSAPWMGPNYSVPPPQGQNGGMLPNQPAGYRVAGYETQ", "length": 387 }, "evidence": [ { "id": "A0A4X1W9V2", "url": "https://omabrowser.org/oma/group/A0A4X1W9V2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0Z0C6-1", "protein_name": "Cytotoxic granule associated RNA binding protein TIA1", "gene_name": "TIA1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAASALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMISPVQQNQIGYPQAYGQWGQWYGNAQLGQYVPNGWQVPAYGMYGQAWNQQGFNQTQSSAAWMGANYSVQPPQGQNGSVLTNQAGYRVAGFETQ", "length": 383 }, "evidence": [ { "id": "A0A4X1W9V2", "url": "https://omabrowser.org/oma/group/A0A4X1W9V2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "P31483-1", "protein_name": "Cytotoxic granule associated RNA binding protein TIA1", "gene_name": "TIA1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPQPYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQAWNQQGFNQTQSSAPWMGPNYGVQPPQGQNGSMLPNQPSGYRVAGYETQ", "length": 386 }, "evidence": [ { "id": "A0A4X1W9V2", "url": "https://omabrowser.org/oma/group/A0A4X1W9V2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P52912-1", "protein_name": "Cytotoxic granule associated RNA binding protein TIA1", "gene_name": "Tia1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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"UniProtKB", "id": "A0A4X1W9V2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W9V2" } ], "pmid": "" }, { "name": "protein-RNA adaptor activity", "id": "GO:0140517", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140517", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W9V2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W9V2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 7, "go_terms": [ { "name": "mRNA processing", "id": "GO:0006397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006397", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W9V2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W9V2" } ], "pmid": "" }, { "name": "apoptotic process", "id": "GO:0006915", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006915", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W9V2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W9V2" } ], "pmid": "" }, { "name": "RNA splicing", "id": "GO:0008380", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008380", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W9V2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W9V2" } ], "pmid": "" }, { "name": "regulation of alternative mRNA splicing, via spliceosome", "id": "GO:0000381", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000381", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W9V2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W9V2" } ], "pmid": "" }, { "name": "protein localization to cytoplasmic stress granule", "id": "GO:1903608", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1903608", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W9V2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W9V2" } ], "pmid": "" }, { "name": "negative regulation of translation", "id": "GO:0017148", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017148", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W9V2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W9V2" } ], "pmid": "" }, { 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"sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QEP9-1", "uniprot_ac": "A0A5G2QEP9", "uniprot_id": "A0A5G2QEP9_PIG", "mass": { "chemical_mass": 135447.0, "monoisotopic_mass": 135447.0 }, "refseq": { "ac": "XP_020938326", "name": "liprin-alpha-1 isoform X7", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020938326" }, "gene_names": [ { "name": "PPFIA1", "type": "recommended", "evidence": [ { "id": "A0A5G2QEP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEP9" } ] }, { "name": "PPFIA1", "type": "synonym", "evidence": [ { "id": "XP_020938326", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020938326" } ] } ], "protein_names": [ { "name": "PTPRF interacting protein alpha 1", "type": "synonym", "evidence": [ { "id": "A0A5G2QEP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEP9/entry#names_and_taxonomy" } ] }, { "name": "liprin-alpha-1 isoform X7", "type": "synonym", "evidence": [ { "id": "XP_020938326", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020938326" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEP9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEP9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PPFIA1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEP9", "locus": { "chromosome": "2", "start_pos": 3073241, "end_pos": 3164235, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000037451", "url": "https://www.ensembl.org/id/ENSSSCG00000037451" } ] } } ], "crossref": [ { "id": "A0A5G2QEP9", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QEP9", "database": "AlphaFoldDB", 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"id": "A0A287AF27", "url": "https://www.uniprot.org/uniprotkb/A0A287AF27", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AF27-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AF27-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QEP9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEP9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QEP9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEP9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"length": 1202, "header": "tr|A0A5G2QEP9-1|A0A5G2QEP9_PIG Isoform 1 of PTPRF interacting protein alpha 1 OS=Sus scrofa OX=9823 GN=PPFIA1 PE=3 SV=2 CANONICAL=A0A5G2QEP9-1" }, "isoforms": [ { "isoform_ac": "A0A287A0R3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A0R3/entry", "sequence": { "sequence": 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"length": 1128, "header": "tr|A0A287A0R3-1|A0A5G2QEP9_PIG Computationally mapped isoform of PTPRF interacting protein alpha 1 OS=Sus scrofa OX=9823 GN=PPFIA1 PE=3 SV=2 CANONICAL=A0A5G2QEP9-1" }, "locus": { "chromosome": "2", "start_pos": 3145192, "end_pos": 3075197, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043630.2", "url": "https://www.ensembl.org/id/ENSSSCT00000043630.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037311.2", "url": "https://www.ensembl.org/id/ENSSSCP00000037311.2" } ] } }, { "isoform_ac": "A0A287AF27-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AF27/entry", "sequence": { "sequence": "MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRERLRVALERCSLLEEELGATHKELMILKEQNNQKKTLTDGVLDENHEQEDTPSANGKRSSDGSLSHEEDLAKVVELQEVIDKQAREQTQMKERLAALSARVTELEGDLDTARKDLIKSEEANTRLQRDVRETEDKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALSKAEERHGNIEERLRQMEAQLEEKSQELQRARQREKMNEEHNKRLSDTVDKLLSESNERLQLHLKERMAALEDKNSLIREVENAKKQLEEAQHDKDQLMLKLEALRAELDQTRLRGAPLHHGRPHLGSVPDFRFPAADGPEDSYSSSAVLRRPQKGRLAALRDEPSKVQTLNEQDWERAQQASVLANVAQAFESDVDVSDGEDDRDALFSSAALLSPGGQADAQTLAMMLQEQLDAINKEIRLIQEEKENTEQRAEEIESRVGSGSLDSLGRFRSMSSIPPYPASSIAGSSPPNSGRSTPRRMPHSPAREVDRLGIMTLLPASREEVRDDKTTIKCETSPPASPRSLRLDRLHKGAPHTVSHEDIRDARNSTGSQDGPVSNPSSSNSSQDSLHKAPKKKGIKSSIGRLFGKKEKGRPGHPGRESFGQAGVSEIENSSQDALGLSKLGGQAEKNRKLQKKHELLEDARRQGLPFAQWDGPTVVVWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSLTSPSAPPTSRTTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRGQLKMVDSFHRNSFQCGIMCLRRLNYDRKELERRREESQNELKDVLVWSNDRVIRWILSVGLKEYANNLLESGVHGALMALDETFDFSALALLLQIPTQNTQARAVLEREFNNLLVMGTDRRFDEDDDKSFRRAPSWRRKFRPKDVRGVAAGSAEILPADFRATSPLSSPPLQPKKAQLDGGVSGSQRLDSATVRTYSC", "length": 1153, "header": "tr|A0A287AF27-1|A0A5G2QEP9_PIG Computationally mapped isoform of PTPRF interacting protein alpha 1 OS=Sus scrofa OX=9823 GN=PPFIA1 PE=3 SV=3 CANONICAL=A0A5G2QEP9-1" }, "locus": { "chromosome": "2", "start_pos": 3164036, "end_pos": 3075197, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060920.3", "url": "https://www.ensembl.org/id/ENSSSCT00000060920.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000042595.3", "url": "https://www.ensembl.org/id/ENSSSCP00000042595.3" } ] } }, { "isoform_ac": "A0A5G2QEP9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEP9/entry", "sequence": { "sequence": 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"length": 1202, "header": "tr|A0A5G2QEP9-1|A0A5G2QEP9_PIG Isoform 1 of PTPRF interacting protein alpha 1 OS=Sus scrofa OX=9823 GN=PPFIA1 PE=3 SV=2 CANONICAL=A0A5G2QEP9-1" }, "locus": { "chromosome": "2", "start_pos": 3164036, "end_pos": 3075197, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067190.2", "url": "https://www.ensembl.org/id/ENSSSCT00000067190.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062669.2", "url": "https://www.ensembl.org/id/ENSSSCP00000062669.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., 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"id": "A0A5G2QED3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QED3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QED3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QED3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2H5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2H5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2H5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2H5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9A8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9A8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9A8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9A8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RP01", "url": "https://www.uniprot.org/uniprotkb/F1RP01", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RP01-1", "url": "https://www.uniprot.org/uniprotkb/F1RP01-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMAAEAGSEEGGPVTAGAAGGGAAAGSSAYPAACRVKIPAALPVAAGPYSGQAEAGVAGTLGGGAALGSSILGPGSVAGALAGAGLSGGGAAAGVAGAAAAGPGGEMALTKGTTSLSTETFGAGGGFPPLPPPPQLPPLGAGLGTVDEGDSLDGPEYEEEEVAIPLTAPPTNQWYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQTNVVNHFRIIAMCGDYYIGGRRFSSLSDLIGYYSHVSCLLKGEKLLYPVAPPEPVEDRRRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQIVEGYYLKEPVPMQDQEQVLNETVDGKEIYNTIRRKTKDAFYKNIVKKGYLLKKGKGKRWKNLYFILEGSDAQLIYFESEKRATKPKGLIDLSVCSVYVVHDSLFGRPNCFQIVVQHFSEEHYIFYFAGETPEQAEDWMKGLQAFCNLRKSSPGTSNKRLRQVSSLVLHIEEAHKLPVKHFTNPYCNIYLNSVQVAKTHAREGQNPVWSEEFVFDDLPPDINRFEITLSNKTKKSKDPDILFMRCQLSRLQKGHATDEWFLLSSHIPLKGIEPGSLRVRARYSMEKIMPEEEYSEFKELILQKELHVVNALSHVCGQDRTLLASILLRIFLHEKLESLLLCTLNDREISMEDEATTLFRATTLASTLMEQYMKATATQFVHHALKDSILKIMESKQSCELSPSKLEKNEDVNTNLAHLLNILSELVEKIFMASEILPPTLRYIYGCLQKSVQHKWPTNTTMRTRVVSGFVFLRLICPAILNPRMFNIISDSPSPIAARTLILVAKSVQNLANLVEFGAKEPYMEGVNPFIKSNKHRMIMFLDELGNVPELPDTTEHSRTDLSRDLAALHEICVAHSDELRTLSNERGAQQHVLKKLLAITELLQQKQNQYTKTNDVR", "length": 1040, "header": "tr|A0A5G2QED3-1|A0A5G2QED3_PIG Isoform 1 of Ras GTPase-activating protein 1 OS=Sus scrofa OX=9823 GN=RASA1 PE=1 SV=1 CANONICAL=A0A5G2QED3-1" }, "isoforms": [ { "isoform_ac": "A0A287A3J8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A3J8/entry", "sequence": { "sequence": "MALTKGTTSLSTETFGAGGGFPPLPPPPQLPPLGAGLGTVDEGDSLDGPEYEEEEVAIPLTAPPTNQWYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQTNVVNHFRIIAMCGDYYIGGRRFSSLSDLIGYYSHVSCLLKGEKLLYPVAPPEPVEDRRRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQIVEGYYLKEPVPMQDQEQVLNETVDGKEIYNTIRRKTKDAFYKNIVKKGYLLKKGKGKRWKNLYFILEGSDAQLIYFESEKRATKPKGLIDLSVCSVYVVHDSLFGRPNCFQIVVQHFSEEHYIFYFAGETPEQAEDWMKGLQAFCNLRKSSPGTSNKRLRQVSSLVLHIEEAHKLPVKHFTNPYCNIYLNSVQVAKTHAREGQNPVWSEEFVFDDLPPDINRFEITLSNKTKKSKDPDILFMRCQLSRLQKGHATDEWFLLSSHIPLKGIEPGSLRVRARYSMEKIMPEEEYSEFKELILQKELHVVNALSHVCGQDRTLLASILLRIFLHEKLESLLLCTLNDREISMEDEATTLFRATTLASTLMEQYMKATATQFVHHALKDSILKIMESKQSCELSPSKLEKNEDVNTNLAHLLNILSELVEKIFMASEILPPTLRYIYGCLQKSVQHKWPTNTTMRTRVVSGFVFLRLICPAILNPRMFNIISDSPSPIAARTLILVAKSVQNLANLVEFGAKEPYMEGVNPFIKSNKHRMIMFLDELGNVPELPDTTEHSRTDLSRDLAALHEICVAHSDELRTLSNERGAQQHVLKKLLAITELLQQKQNQYTKTNDVR", "length": 934, "header": "tr|A0A287A3J8-1|A0A5G2QED3_PIG Computationally mapped isoform of Ras GTPase-activating protein 1 OS=Sus scrofa OX=9823 GN=RASA1 PE=1 SV=2 CANONICAL=A0A5G2QED3-1" }, "locus": { "chromosome": "2", "start_pos": 94990219, "end_pos": 94880031, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056952.3", "url": "https://www.ensembl.org/id/ENSSSCT00000056952.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038318.2", "url": "https://www.ensembl.org/id/ENSSSCP00000038318.2" } ] } }, { "isoform_ac": "A0A5G2QED3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QED3/entry", "sequence": { "sequence": "MMAAEAGSEEGGPVTAGAAGGGAAAGSSAYPAACRVKIPAALPVAAGPYSGQAEAGVAGTLGGGAALGSSILGPGSVAGALAGAGLSGGGAAAGVAGAAAAGPGGEMALTKGTTSLSTETFGAGGGFPPLPPPPQLPPLGAGLGTVDEGDSLDGPEYEEEEVAIPLTAPPTNQWYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQTNVVNHFRIIAMCGDYYIGGRRFSSLSDLIGYYSHVSCLLKGEKLLYPVAPPEPVEDRRRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQIVEGYYLKEPVPMQDQEQVLNETVDGKEIYNTIRRKTKDAFYKNIVKKGYLLKKGKGKRWKNLYFILEGSDAQLIYFESEKRATKPKGLIDLSVCSVYVVHDSLFGRPNCFQIVVQHFSEEHYIFYFAGETPEQAEDWMKGLQAFCNLRKSSPGTSNKRLRQVSSLVLHIEEAHKLPVKHFTNPYCNIYLNSVQVAKTHAREGQNPVWSEEFVFDDLPPDINRFEITLSNKTKKSKDPDILFMRCQLSRLQKGHATDEWFLLSSHIPLKGIEPGSLRVRARYSMEKIMPEEEYSEFKELILQKELHVVNALSHVCGQDRTLLASILLRIFLHEKLESLLLCTLNDREISMEDEATTLFRATTLASTLMEQYMKATATQFVHHALKDSILKIMESKQSCELSPSKLEKNEDVNTNLAHLLNILSELVEKIFMASEILPPTLRYIYGCLQKSVQHKWPTNTTMRTRVVSGFVFLRLICPAILNPRMFNIISDSPSPIAARTLILVAKSVQNLANLVEFGAKEPYMEGVNPFIKSNKHRMIMFLDELGNVPELPDTTEHSRTDLSRDLAALHEICVAHSDELRTLSNERGAQQHVLKKLLAITELLQQKQNQYTKTNDVR", "length": 1040, "header": "tr|A0A5G2QED3-1|A0A5G2QED3_PIG Isoform 1 of Ras GTPase-activating protein 1 OS=Sus scrofa OX=9823 GN=RASA1 PE=1 SV=1 CANONICAL=A0A5G2QED3-1" }, "locus": { "chromosome": "2", "start_pos": 94990219, "end_pos": 94879713, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077661.2", "url": "https://www.ensembl.org/id/ENSSSCT00000077661.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060406.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060406.1" } ] } }, { "isoform_ac": "A0A5G2R2H5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2H5/entry", "sequence": { "sequence": "MFKLICRCVKSLVVCFSTTNSNFMVAIFILISLIFFLRWYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQTNVVNHFRIIAMCGDYYIGGRRFSSLSDLIGYYSHVSCLLKGEKLLYPVAPPEPVEDRRRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVVSFIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQIVEGYYLKEPVPMQDQEQVLNETVDGKEIYNTIRRKTKDAFYKNIVKKGYLLKKGKGKRWKNLYFILEGSDAQLIYFESEKRATKPKGLIDLSVCSVYVVHDSLFGRPNCFQIVVQHFSEEHYIFYFAGETPEQAEDWMKGLQAFCNLRKSSPGTSNKRLRQVSSLVLHIEEAHKLPVKHFTNPYCNIYLNSVQVAKTHAREGQNPVWSEEFVFDDLPPDINRFEITLSNKTKKSKDPDILFMRCQLSRLQKGHATDEWFLLSSHIPLKGIEPGSLRVRARYSMEKIMPEEEYSEFKELILQKELHVVNALSHVCGQDRTLLASILLRIFLHEKLESLLLCTLNDREISMEDEATTLFRATTLASTLMEQYMKATATQFVHHALKDSILKIMESKQSCELSPSKLEKNEDVNTNLAHLLNILSELVEKIFMASEILPPTLRYIYGCLQKSVQHKWPTNTTMRTRVVSGFVFLRLICPAILNPRMFNIISDSPSPIAARTLILVAKSVQNLANLVEFGAKEPYMEGVNPFIKSNKHRMIMFLDELGNVPELPDTTEHSRTDLSRDLAALHEICVAHSDELRTLSNERGAQQHVLKKLLAITELLQQKQNQYTKTNDVR", "length": 898, "header": "tr|A0A5G2R2H5-1|A0A5G2QED3_PIG Computationally mapped isoform of Ras GTPase-activating protein 1 OS=Sus scrofa OX=9823 GN=RASA1 PE=1 SV=2 CANONICAL=A0A5G2QED3-1" }, "locus": { "chromosome": "2", "start_pos": 94990219, "end_pos": 94936319, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079407.2", "url": "https://www.ensembl.org/id/ENSSSCT00000079407.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071391.2", "url": "https://www.ensembl.org/id/ENSSSCP00000071391.2" } ] } }, { "isoform_ac": "A0A5G2R9A8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9A8/entry", "sequence": { "sequence": "MFKLICRCVKSLVVCFSTTNSNFMVAIFILISLIFFLRWYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQTNVVNHFRIIAMCGDYYIGGRRFSSLSDLIGYYSHVSCLLKGEKLLYPVAPPEAIEDRRRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQIVEGYYLKEPVPMQDQEQVLNETVDGKEIYNTIRRKTKDAFYKNIVKKGYLLKKGKGKRWKNLYFILEGSDAQLIYFESEKRATKPKGLIDLSVCSVYVVHDSLFGRPNCFQIVVQHFSEEHYIFYFAGETPEQAEDWMKGLQAFCNLRKSSPGTSNKRLRQVSSLVLHIEEAHKLPVKHFTNPYCNIYLNSVQVAKTHAREGQNPVWSEEFVFDDLPPDINRFEITLSNKTKKSKDPDILFMRCQLSRLQKGHATDEWFLLSSHIPLKGIEPGSLRVRARYSMEKIMPEEEYSEFKELILQKELHVVNALSHVCGQDRTLLASILLRIFLHEKLESLLLCTLNDREISMEDEATTLFRATTLASTLMEQYMKATATQFVHHALKDSILKIMESKQSCELSPSKLEKNEDVNTNLAHLLNILSELVEKIFMASEILPPTLRYIYGCLQKSVQHKWPTNTTMRTRVVSGFVFLRLICPAILNPRMFNIISDSPSPIAARTLILVAKSVQNLANLVEFGAKEPYMEGVNPFIKSNKHRMIMFLDELGNVPELPDTTEHSRTDLSRDLAALHEICVAHSDELRTLSNERGAQQHVLKKLLAITELLQQKQNQYTKTNDVR", "length": 905, "header": "tr|A0A5G2R9A8-1|A0A5G2QED3_PIG Computationally mapped isoform of Ras GTPase-activating protein 1 OS=Sus scrofa OX=9823 GN=RASA1 PE=1 SV=2 CANONICAL=A0A5G2QED3-1" }, "locus": { "chromosome": "2", "start_pos": 94990219, "end_pos": 94936319, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067129.2", "url": "https://www.ensembl.org/id/ENSSSCT00000067129.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073873.2", "url": "https://www.ensembl.org/id/ENSSSCP00000073873.2" } ] } }, { "isoform_ac": "F1RP01-1", "url": "https://www.uniprot.org/uniprotkb/F1RP01/entry", "sequence": { "sequence": "MMAAEAGSEEGGPVTAGAAGGGAAAGSSAYPAACRVKIPAALPVAAGPYSGQAEAGVAGTLGGGAALGSSILGPGSVAGALAGAGLSGGGAAAGVAGAAAAGPGGEMALTKGTTSLSTETFGAGGGFPPLPPPPQLPPLGAGLGTVDEGDSLDGPEYEEEEVAIPLTAPPTNQWYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQTNVVNHFRIIAMCGDYYIGGRRFSSLSDLIGYYSHVSCLLKGEKLLYPVAPPEPVEDRRRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQIVEGYYLKEPVPMQDQEQVLNETVDGKEIYNTIRRKTKDAFYKNIVKKGYLLKKGKGKRWKNLYFILEGSDAQLIYFESEKRATKPKGLIDLSVCSVYVVHDSLFGRPNCFQIVVQHFSEEHYIFYFAGETPEQAEDWMKGLQAFCNLRKSSPGTSNKRLRQVSSLVLHIEEAHKLPVKHFTNPYCNIYLNSVQVAKTHAREGQNPVWSEEFVFDDLPPDINRFEITLSNKTKKSKDPDILFMRCQLSRLQKGHATDEWFLLSSHIPLKGIEPGSLRVRARYSMEKIMPEEEYSEFKELILQKELHVVNALSHVCGQDRTLLASILLRIFLHEKLESLLLCTLNDREISMEDEATTLFRATTLASTLMEQYMKATATQFVHHALKDSILKIMESKQSCELSPSKLEKNEDVNTNLAHLLNILSELVEKIFMASEILPPTLRYIYGCLQKSVQHKWPTNTTMRTRVVSGFVFLRLICPAILNPRMFNIISDSPSPIAARTLILVAKSVQNLANLVEFGAKNVPELPDTTEHSRTDLSRDLAALHEICVAHSDELRTLSNERGAQQHVLKKLLAITELLQQKQNQYTKTNDVR", "length": 1014, "header": "tr|F1RP01-1|A0A5G2QED3_PIG Computationally mapped isoform of Ras GTPase-activating protein 1 OS=Sus scrofa OX=9823 GN=RASA1 PE=1 SV=3 CANONICAL=A0A5G2QED3-1" }, "locus": { "chromosome": "2", "start_pos": 94990219, "end_pos": 94879713, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000015450.5", "url": "https://www.ensembl.org/id/ENSSSCT00000015450.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000015040.3", "url": "https://www.ensembl.org/id/ENSSSCP00000015040.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2H5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2H5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100627579", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627579", "resource": "KEGG Pathway" }, { "id": "R-SSC-186763", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-186763", "resource": "Reactome", "description": "Downstream signal transduction" }, { "id": "R-SSC-3928662", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3928662", "resource": "Reactome", "description": "EPHB-mediated forward signaling" }, { "id": "R-SSC-5218921", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5218921", "resource": "Reactome", "description": "VEGFR2 mediated cell proliferation" }, { "id": "R-SSC-5658442", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5658442", "resource": "Reactome", "description": "Regulation of RAS by GAPs" }, { "id": "R-SSC-8849471", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8849471", "resource": "Reactome", "description": "PTK6 Regulates RHO GTPases, RAS GTPase and MAP kinases" } ], "orthologs": [ { "uniprot_canonical_ac": "E9PYG6-1", "protein_name": "Ras GTPase-activating protein 1", "gene_name": "Rasa1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMAAEAGSEEGGPATAGPGGGAATGSSAYSAACRVKLPAALPVAAAPCPGLADADLVAALGGGAASGSGFLGTGPVAGVLGGAALTGSAAAGVAGAAAAGPAGDVAFTKGTLSLPAETLGPGGGFPPLPPPPQLPPLGSGLGTVDEGDSLDGPEYEEEEVAIPLTAPPTNQWYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQTNVVNHFRIIAMCGDYYIGGRRFSSLSDLIGYYSHVSCLLKGEKLLYPVAPPEPVEDRRRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQIVEGYYLKEPVPMQDQGQVLNDTVDGKEIYNTIRRKTKDAFYKNIVKKGYLLKKGKGKRWKNLYFILEGSDAQLIYFESEKRATKPKGLIDLSVCSVYVVHDSLFGRPNCFQIVVQHFSEEHYIFYFAGETPEQAEDWMKGLQAFCSLRKSSPGTSNKRLRQVSSLVLHIEEAHKLPVKHFTNPYCNIYLNSVQVAKTHAREGQNPVWSEEFVFDDLPPDINRFEITLSNKTKKSKDPDILFMRCQLSRLQKGHATDEWFLLSSHIPLKGIEPGSLRVRARYSMEKIMPEEEYSEFKELILQKELHVVYALSHVCGQDRTLLASILLKIFLHEKLESLLLCTLNDREISMEDEATTLFRATTLASTLMEQYMKATATQFVHHALKDSILKIMESKQSCELSPSKLEKNEDVNTNLAHLLSILSELVEKIFMASEILPPTLRYIYGCLQKSVQHKWPTNNTMRTRVVSGFVFLRLICPAILNPRMFNIISDSPSPIAARTLTLVAKSVQNLANLVEFGAKEPYMEGVNPFIKSNKHRMIMFLDELGNVPELPDTTEHSRTDLSRDLAALHEICVAHSDELRTLSNERGVQQHVLKKLLAITELLQQKQNQYTKTNDIR", "length": 1038 }, "evidence": [ { "id": "A0A5G2QED3", "url": "https://omabrowser.org/oma/group/A0A5G2QED3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F1R3X3-1", "protein_name": "Ras GTPase-activating protein 1", "gene_name": "rasa1a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEVRGEDRGSDGSRGPDSTHFPLYSKPARVRVPVPDPDMMIYPSAGGEELAGRAAAATGCESPSSDGPGSSRMSPTDGPTVFPPLPPPPPSGLGGQGSVDESDQQDGPEYEEEEVVFPLSAPPTNQWYHGMLDRTIAEERLRQARTPGSYLIRESDRRPGSFVLSFLSVTSVVNHFRIIAMCGDYYIGGRRFSSLSDLIGYYSYVSCLLKGEKLSSPVAPPEPVEDRRRVRAILPYTKVPETDEISFLKGDMFIVHNELEDGWMWVTNVRTEEQGLIVDDLVEEVGREEDPHEGKIWYHRKISKQEAYNLLLTVGQVCSFLVRPSDNTPGDYSLFFRTNENIQRFKISPTPNNQYMMGGRYYNSVDDIIERYRKEQIVEGYTLKDPVPVQQKEQVLSDLVDGREIYNTIRRKTKDAFYKNIVKKGYLLFNKGKGKRWKHLYFILEGNDAHLIYFESEKRATKPKGLIDLSVCSVYGVHDSLFGRPNCFQIVVQHFSEEQYIFYFAGETPEQAQDWMKCLQTFCNNLRKPLQTTYNKRLRQVSSLVLYVEEAHKLPIKHFTNPYCIISLNSVQVARTHPREGQNPVFTEEFIFDDLSCDINRFEISLSNKSKKSKESDILFMRCQLSKLQRGQMIDEWFPLSSYVPLKGIEPGSLRVRVRYSMEKIMPEEEYSEFKELILQRDYHVIYALAHVCGQDRTLLASILLRILRHERAEALLLRTLNDREINMEDEATTLFRATTLASTLMEQYMKATATPFVHHALKDTILKIMESKQSCELNPSKLEKNEDVNLNLAHLLNILSELVEKIFMAAEILPPTLRYIYGCLQKSVQQKWPTNTTMRTRVVSGFVFLRLICPAILNPRMFNIIADPPSSTAGRTLTLVAKSVQNLANLVEFGAKEPYMEGVNPFIKNNKQRMIMFLDELGNVPDLPESTEHFRTDLSRDLAALHEICATHSDELRTLSNERGAQQHALKKLLAITELLQQKQVQYAMSNSSRTECTFMAVATTIQIL", "length": 1010 }, "evidence": [ { "id": "A0A5G2QED3", "url": "https://omabrowser.org/oma/group/A0A5G2QED3/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "P20936-1", "protein_name": "Ras GTPase-activating protein 1", "gene_name": "RASA1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MMAAEAGSEEGGPVTAGAGGGGAAAGSSAYPAVCRVKIPAALPVAAAPYPGLVETGVAGTLGGGAALGSEFLGAGSVAGALGGAGLTGGGTAAGVAGAAAGVAGAAVAGPSGDMALTKLPTSLLAETLGPGGGFPPLPPPPYLPPLGAGLGTVDEGDSLDGPEYEEEEVAIPLTAPPTNQWYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQMNVVNHFRIIAMCGDYYIGGRRFSSLSDLIGYYSHVSCLLKGEKLLYPVAPPEPVEDRRRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQIVEGYYLKEPVPMQDQEQVLNDTVDGKEIYNTIRRKTKDAFYKNIVKKGYLLKKGKGKRWKNLYFILEGSDAQLIYFESEKRATKPKGLIDLSVCSVYVVHDSLFGRPNCFQIVVQHFSEEHYIFYFAGETPEQAEDWMKGLQAFCNLRKSSPGTSNKRLRQVSSLVLHIEEAHKLPVKHFTNPYCNIYLNSVQVAKTHAREGQNPVWSEEFVFDDLPPDINRFEITLSNKTKKSKDPDILFMRCQLSRLQKGHATDEWFLLSSHIPLKGIEPGSLRVRARYSMEKIMPEEEYSEFKELILQKELHVVYALSHVCGQDRTLLASILLRIFLHEKLESLLLCTLNDREISMEDEATTLFRATTLASTLMEQYMKATATQFVHHALKDSILKIMESKQSCELSPSKLEKNEDVNTNLTHLLNILSELVEKIFMASEILPPTLRYIYGCLQKSVQHKWPTNTTMRTRVVSGFVFLRLICPAILNPRMFNIISDSPSPIAARTLILVAKSVQNLANLVEFGAKEPYMEGVNPFIKSNKHRMIMFLDELGNVPELPDTTEHSRTDLSRDLAALHEICVAHSDELRTLSNERGAQQHVLKKLLAITELLQQKQNQYTKTNDVR", "length": 1047 }, "evidence": [ { "id": "A0A5G2QED3", "url": "https://omabrowser.org/oma/group/A0A5G2QED3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P50904-1", "protein_name": "Ras GTPase-activating protein 1", "gene_name": "Rasa1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MMAAEAGSEEGGPATAGTGGAAATGSSAYPAACRVKLPAAPPMAVAPCPGLADTDLAAALGGGAASGSGFLGTGPVSGVLGGAALTGGAAAGVAGAAAAGPAGDIALTKGTLSLPAETLGPGGGFPPLPPPPLLPPLGSGLGTVDEGDSLDGPEYEEEEVAIPLTAPPTNQWYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQTNVVNHFRIIAMCGDYYIGGRRFSSLSDLIGYYSHVSCLLKGEKLLYPVAPPEPVEDRRRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQIVEGYYLKEPVPMQDQGQVLNDTVDGKEIYNTIRRKTKDAFYKNIVKKGYLLKKGKGKRWKNLYFILEGSDAQLIYFESEKRATKPKGLIDLSVCSVYVVHDSLFGRPNCFQIVVQHFSEEHYIFYFAGETPEQAEDWMKGLQAFCSLRKSSPGTSNKRLRQVSSLVLHIEEAHKLPVKHFTNPYCNIYLNSVQVAKTHAREGQNPVWSEEFVFDDLPPDINRFEITLSNKTKKSKDPDILFMRCQLSRLQKGHATDEWFLLSSHIPLKGIEPGSLRVRARYSMEKIMPEEEYSEFKELILQKELHVVYALSHVCGQDRTLLASILLKIFLHEKLESLLLCTLNDREISMEDEATTLFRATTLASTLMEQYMKATATQFVHHALKDSILKIMESKQSCELSPSKLEKNEDVNTNLAHLLSILSELVEKIFMASEILPPTLRYIYGCLQKSVQHKWPTNNTMRTRVVSGFVFLRLICPAILNPRMFNIISDSPSPIAARTLTLVAKSVQNLANLVEFGAKEPYMEGVNPFIKSNKHRMIMFLDELGNVPELPDTTEHSRTDLSRDLAALHEICVAHSDELRTLSNERGVQQHVLKKLLAITELLQQKQNQYTKTNDVR", "length": 1038 }, "evidence": [ { "id": "A0A5G2QED3", "url": "https://omabrowser.org/oma/group/A0A5G2QED3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8IR23-1", "protein_name": "Vacuolar peduncle, isoform A", "gene_name": "vap", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MADLIHLGNIDVVIQKDKPGSPTGCSDDGNLAGLGGMTGLGGIMAPGGIDLGDLAQELDHDEFDGPHMLNGERPAIIAPPESEWYHGRLDRYSAESRLRGSSKLGSYLVRESDRKPGSYVLSYYGRTGINHFRITAVCGDFYIGGRQFISLSDLVGYYTSCSDLLKRERLAIPVAPPEPVNDKKRVVAILPYTKMPETDELSFQKGDIFFVHNDMGDGWLWVTAHRTGEQGMIFRELVDDLDVSIDPNTVFPWFHPNCTKNEAVDMLVKAGPGSFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKGVRYLMGGRTFECLDAVINRYRKEQIVEGHSLNHPVVNGIQPEFNQQYVVEKAAEKIYATLRECRDQIGLKKIKGIKHHGHLNKKSDKTTKWKQLYFALINDGSETQLCFYDNPKKTKPKGLIDLSCAYLYQCHDSLWERPYCFQIVERALPCLATVTYLCAPSQESYVEWINSLKAQCDSQLSRAQKKVSRLRELRCLNLHVLEAHRLPFKLVPHPYCSISLNQVKVGKTRVKIAPEPVWEEEFVLDDVPPDVVSLTITLISRGKRGKDSEVAELTIDLSSLKNGQETEGWYQLTGMTPMGEWGSLRLRMRYLDDLIMPCEEYSPLQQLLLESELYAVKALAELCHNDRVPLATALLRVFRQEKRETELIRMLCQAEVTRENETTTLFRGASLATTLMDLYMRTECSGFLQSAVSETVQRILESKQSAELNPTKMDVNDDACTNAEFLLQILDLVTQSIFTSPDACPRNVRFICSCLQKAVMAKWPTERLVRTRVVSGFIFLRLLCPALLNPRQFGLVSETPPMAATRSLVMVAKCLQNLANLIEFGGKEQYMEVVNPFILKNKERMIVFLDQLSSVNDPNQPLGMFVEQSTNLNSQDTGRELATLHHICVSHSQELHELSNILSIKKLVTVTDMLTKHKLKYREMIS", "length": 954 }, "evidence": [ { "id": "A0A5G2QED3", "url": "https://omabrowser.org/oma/group/A0A5G2QED3/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 7, "go_terms": [ { "name": "system development", "id": "GO:0048731", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048731", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QED3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QED3" } ], "pmid": "" }, { "name": "angiogenesis", "id": "GO:0001525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001525", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QED3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QED3" } ], "pmid": "" }, { "name": "negative regulation of apoptotic process", "id": "GO:0043066", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043066", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QED3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QED3" } ], "pmid": "" }, { "name": "ephrin receptor signaling pathway", "id": "GO:0048013", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048013", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QED3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QED3" } ], "pmid": "" }, { "name": "negative regulation of cell-matrix adhesion", "id": "GO:0001953", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001953", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QED3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QED3" } ], "pmid": "" }, { "name": "regulation of intracellular signal transduction", "id": "GO:1902531", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902531", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QED3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QED3" } ], "pmid": "" }, { "name": "regulation of actin filament polymerization", "id": "GO:0030833", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030833", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QED3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QED3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QED3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QED3" } ], "pmid": "" }, { "name": "signaling receptor binding", "id": "GO:0005102", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005102", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QED3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QED3" } ], "pmid": "" }, { "name": "enzyme binding", "id": "GO:0019899", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019899", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QED3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QED3" } ], "pmid": "" }, { "name": "phosphotyrosine residue binding", "id": "GO:0001784", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001784", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QED3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QED3" } ], "pmid": "" }, { "name": "GTPase binding", "id": "GO:0051020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051020", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QED3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QED3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QED3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QED3" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QED3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QED3" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QED3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QED3" } ], "pmid": "" }, { "name": "ruffle", "id": "GO:0001726", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001726", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QED3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QED3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 444, "end_pos": 446, "annotation": "n_glycosylation_sequon" }, { "start_pos": 653, "end_pos": 655, "annotation": "n_glycosylation_sequon" }, { "start_pos": 881, "end_pos": 883, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QED3-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1040, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QED3-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QED3" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QED3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QED3" }, { "id": "PS50004", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50004" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2", "eco_id": "ECO_0000259", "start_pos": 570, "end_pos": 683, "start_aa": "Asn", "end_aa": "Phe", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A5G2QED3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QED3" }, { "id": "PS50003", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50003" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PH", "eco_id": "ECO_0000259", "start_pos": 467, "end_pos": 570, "start_aa": "Asn", "end_aa": "Asn", "glycosite_overlap": [] }, { "evidence": [ { 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} ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SH3", "eco_id": "ECO_0000259", "start_pos": 272, "end_pos": 334, "start_aa": "Glu", "end_aa": "Arg", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 444, "end_pos": 446 }, { "start_pos": 653, "end_pos": 655 }, { "start_pos": 881, "end_pos": 883 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QFN5-1", "uniprot_ac": "A0A5G2QFN5", "uniprot_id": "A0A5G2QFN5_PIG", "mass": { "chemical_mass": 168018.0, "monoisotopic_mass": 168018.0 }, "refseq": {}, "gene_names": [ { "name": "ITSN1", "type": "recommended", "evidence": [ { "id": "A0A5G2QFN5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFN5" } ] } ], "protein_names": [ { "name": "Intersectin-1", "type": "recommended", "evidence": [ { "id": "A0A5G2QFN5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFN5/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Adapter protein that provides a link between the endocytic membrane traffic and the actin assembly machinery. Acts as a guanine nucleotide exchange factor (GEF) for CDC42, and thereby stimulates actin nucleation mediated by WASL and the ARP2/3 complex. Plays a role in the assembly and maturation of clathrin-coated vesicles. Recruits FCHSD2 to clathrin-coated pits. Involved in endocytosis of activated EGFR, and probably also other growth factor receptors. Involved in endocytosis of integrin beta-1 (ITGB1) and transferrin receptor (TFR); internalization of ITGB1 as DAB2-dependent cargo but not TFR may involve association with DAB2. Promotes ubiquitination and subsequent degradation of EGFR, and thereby contributes to the down-regulation of EGFR-dependent signaling pathways. In chromaffin cells, required for normal exocytosis of catecholamines. Required for rapid replenishment of release-ready synaptic vesicles at presynaptic active zones. Inhibits ARHGAP31 activity toward RAC1.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFN5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFN5#function" }, { "database": "UniProtKB", "id": "ARBA00056103", "url": "https://www.uniprot.org/uniprotkb/ARBA00056103#function" }, { "database": "UniProtKB", "id": "I3LSM1", "url": "https://www.uniprot.org/uniprotkb/I3LSM1#function" }, { "database": "UniProtKB", "id": "A0A8W4FIR4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FIR4#function" }, { "database": "UniProtKB", "id": "A0A287A536", "url": "https://www.uniprot.org/uniprotkb/A0A287A536#function" }, { "database": "UniProtKB", "id": "A0A8W4F6B7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F6B7#function" }, { "database": "UniProtKB", "id": "A0A8W4F9F2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9F2#function" }, { "database": "UniProtKB", "id": "A0A8W4F917", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F917#function" }, { "database": "UniProtKB", "id": "A0A5G2Q9S5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9S5#function" } ] }, { "annotation": "Plays a role in synaptic vesicle endocytosis in brain neurons.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFN5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFN5#function" }, { "database": "UniProtKB", "id": "ARBA00058637", "url": "https://www.uniprot.org/uniprotkb/ARBA00058637#function" }, { "database": "UniProtKB", "id": "I3LSM1", "url": "https://www.uniprot.org/uniprotkb/I3LSM1#function" }, { "database": "UniProtKB", "id": "A0A8W4FIR4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FIR4#function" }, { "database": "UniProtKB", "id": "A0A287A536", "url": "https://www.uniprot.org/uniprotkb/A0A287A536#function" }, { "database": "UniProtKB", "id": "A0A8W4F6B7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F6B7#function" }, { "database": "UniProtKB", "id": "A0A8W4F9F2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9F2#function" }, { "database": "UniProtKB", "id": 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"UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LSM1-1", "url": "https://www.uniprot.org/uniprotkb/I3LSM1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAQFPTPFGGSLDIWAITVEERAKHDQQFHSLKPISGFITGDQARNFFFQSGLPQPVLAQIWALADMNNDGRMDQVEFSIAMKLIKLKLQGYQLPSALPPVMKQQPVAISSAPAFGIGGIASMPPLTAVAPVPMGSIPVVGRSPPLVSSVPAAGVPPLANGAPPVIQPLPAFAHPAATLPKSSSFSRSGPGSQLNTKLQKAQSFDVASVPSAAEWAVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLIDVAMSGQPLPPVLPPEYIPPSFRRVRSGSGISVISSTSVDQRLPEEPVLEDEQQQLEKKLPVTFEDKKRENFERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQERKRQLELEKQLEKQRELERQREEERRKEIERREAAKRELERQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKKTLEFELEALNDKKHQLEGKLQDIRCRLTTQRQEIESTNKSRELRIAEITHLQQQLQESQQMLGRLIPEKQILNDQLKQVQQNRDSLLTLKRALEAKELARQQLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQKQKSIEAERLKQKEQERKIIELEKQKEEAQRRAQERDPPWLEHMHADEEQPRPRKPHEEEKLRREESVKKKDSEEKGKQEMQDKLSRLFHQHQEPGKPAVQAPWSTAEKGPLTISAQENVKVVYYRALYPFESRSHDEITIQPGDIVMVRKTPVDESQTGEPGWLGGELKGKTGWFPANYAEKIPENEVPGPVKPVSDTTSTPAPKLAVRETPTSSAVTSAEPSTTPNNWADFSSTWHSSTNEKPETDNWDAWAAQPSLTVPSAGQLRQRSAFTPATATGSSPSPVLGQGEKVEGLQAQALYPWRAKKDNHLNFNKNDVITVLEQQDMWWFGEVQGQKGWFPKSYVKLISGPIRKSTSIDSGSSESPASLKRVASPAAKPAPSGEEFIAMYTYESSEQGDLTFQQGDVILVTKKDGDWWTGTVGDKSGVFPSNYVRLKDAEGSGTAGKTGSLGKKPEIAQVIASYTATGPEQLTLAPGQLILIRKKNPGGWWEGELQARGKKRQIGWFPANYVKLLSPGTSKITPTEPPKPTAFPAVCQVIGMYDYTAQNDDELAFNKGQVINVLNKEDPDWWKGEVHGQVGLFPSNYVKLTTDMDPSQQWCSDLHLLDLLTPTERKRQGYIHELIVTEENYVNDLQLVTEIFQKPLMESELLTEKEGAMIFVNWKELIMCNVKLLKALRVRKKMSGEKMPVKMIGDILTAQLPHMQPYIRFCSCQLNGAALIQQKTDEAPDFKEFVKRLAMDPRCKGMPLSSFILKPMQRVTRYPLIIKNILENTPENHPDHSHLKHALEKAEELCSQVNEGVREKENSDRLEWIQAHVQCEGLSEQLVFNSVTNCLGPRKFLHSGKLYKPRATKSCMASSSTTSSC", "length": 1485, "header": "tr|A0A5G2QFN5-1|A0A5G2QFN5_PIG Isoform 1 of Intersectin-1 OS=Sus scrofa OX=9823 GN=ITSN1 PE=1 SV=2 CANONICAL=A0A5G2QFN5-1" }, "isoforms": [ { "isoform_ac": "A0A287A536-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A536/entry", "sequence": { "sequence": "MAQFPTPFGGSLDIWAITVEERAKHDQQFHSLKPISGFITGDQARNFFFQSGLPQPVLAQIWALADMNNDGRMDQVEFSIAMKLIKLKLQGYQLPSALPPVMKQQPVAISSAPAFGIGGIASMPPLTAVAPVPMGSIPVVGRSPPLVSSVPAAGVPPLANGAPPVIQPLPAFAHPAATLPKSSSFSRSGPGSQLNTKLQKAQSFDVASVPSAAEWAVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLIDVAMSGQPLPPVLPPEYIPPSFRRVRSGSGISVISSTSVDQRLPEEPVLEDEQQQLEKKLPVTFEDKKRENFERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQERKRQLELEKQLEKQRELERQREEERRKEIERREAAKRELERQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKKTLEFELEALNDKKHQLEGKLQDIRCRLTTQRQEIESTNKSRELRIAEITHLQQQLQESQQMLGRLIPEKQILNDQLKQVQQNSLHRDSLLTLKRALEAKELARQQLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQKQKSIEAERLKQKEQERKIIELEKQKEEAQRRAQERDPPWLEHMHADEEQPRPRKPHEEEKLRREESVKKKDSEEKGKQEMQDKLSRLFHQHQEPGKPAVQAPWSTAEKGPLTISAQENVKVVYYRALYPFESRSHDEITIQPGDIVMVDESQTGEPGWLGGELKGKTGWFPANYAEKIPENEVPGPVKPVSDTTSTPAPKLAVRETPTSSAVTSAEPSTTPNNWADFSSTWHSSTNEKPETDNWDAWAAQPSLTVPSAGQLRQRSAFTPATATGSSPSPVLGQGEKVEGLQAQALYPWRAKKDNHLNFNKNDVITVLEQQDMWWFGEVQGQKGWFPKSYVKLISGPIRKSTSIDSGSSESPASLKRVASPAAKPAPSGEEFIAMYTYESSEQGDLTFQQGDVILVTKKDGDWWTGTVGDKSGVFPSNYVRLKDAEGSGTAGKTGSLGKKPEIAQVIASYTATGPEQLTLAPGQLILIRKKNPGGWWEGELQARGKKRQIGWFPANYVKLLSPGTSKITPTEPPKPTAFPAVCQVIGMYDYTAQNDDELAFNKGQVINVLNKEDPDWWKGEVHGQVGLFPSNYVKLTTDMDPSQQ", "length": 1215, "header": "tr|A0A287A536-1|A0A5G2QFN5_PIG Computationally mapped isoform of Intersectin-1 OS=Sus scrofa OX=9823 GN=ITSN1 PE=1 SV=3 CANONICAL=A0A5G2QFN5-1" }, "locus": { "chromosome": "13", "start_pos": 197443439, "end_pos": 197319787, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040338.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040338.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038885.3", "url": "https://www.ensembl.org/id/ENSSSCP00000038885.3" } ] } }, { "isoform_ac": "A0A5G2Q9S5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9S5/entry", "sequence": { "sequence": "MAQFPTPFGGSLDIWAITVEERAKHDQQFHSLKPISGFITGDQARNFFFQSGLPQPVLAQIWALADMNNDGRMDQVEFSIAMKLIKLKLQGYQLPSALPPVMKQQPVAISSAPAFGIGGIASMPPLTAVAPVPMGSIPVVGRSPPLVSSVPAAGVPPLANGAPPVIQPLPAFAHPAATLPKSSSFSRSGPGSQLNTKLQKAQSFDVASVPSAAEWAVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLIDVAMSGQPLPPVLPPEYIPPSFRRVRSGSGISVISSTSVDQRLPEEPVLEDEQQQLEKKLPVTFEDKKRENFERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQERKRQLELEKQLEKQRELERQREEERRKEIERREAAKRELERQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKKTLEFELEALNDKKHQLEGKLQDIRCRLTTQRQEIESTNKSRELRIAEITHLQQQLQESQQMLGRLIPEKQILNDQLKQVQQNSLHRDSLLTLKRALEAKELARQQLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQKQKSIEAERLKQKEQERKIIELEKQKEEAQRRAQERDPPWLEHMHADEEQPRPRKPHEEEKLRREESVKKKDSEEKGKQEMQDKLSRLFHQHQEPGKPAVQAPWSTAEKGPLTISAQENVKVVYYRALYPFESRSHDEITIQPGDIVMVKGEWVDESQTGEPGWLGGELKGKTGWFPANYAEKIPENEVPGPVKPVSDTTSTPAPKLAVRETPTSSAVTSAEPSTTPNNWADFSSTWHSSTNEKPETDNWDAWAAQPSLTVPSAGQLRQRSAFTPATATGSSPSPVLGQGEKVEGLQAQALYPWRAKKDNHLNFNKNDVITVLEQQDMWWFGEVQGQKGWFPKSYVKLISGPIRKSTSIDSGSSESPASLKRVASPAAKPAPSGEEIAQVIASYTATGPEQLTLAPGQLILIRKKNPGGWWEGELQARGKKRQIGWFPANYVKLLSPGTSKITPTEPPKPTAFPAVCQVIGMYDYTAQNDDELAFNKGQVINVLNKEDPDWWKGEVHGQVGLFPSNYVKLTTDMDPSQQ", "length": 1149, "header": "tr|A0A5G2Q9S5-1|A0A5G2QFN5_PIG Computationally mapped isoform of Intersectin-1 OS=Sus scrofa OX=9823 GN=ITSN1 PE=1 SV=1 CANONICAL=A0A5G2QFN5-1" }, "locus": { "chromosome": "13", "start_pos": 197443439, "end_pos": 197319787, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077583.2", "url": "https://www.ensembl.org/id/ENSSSCT00000077583.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060719.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060719.1" } ] } }, { "isoform_ac": "A0A5G2QFN5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFN5/entry", "sequence": { "sequence": "MAQFPTPFGGSLDIWAITVEERAKHDQQFHSLKPISGFITGDQARNFFFQSGLPQPVLAQIWALADMNNDGRMDQVEFSIAMKLIKLKLQGYQLPSALPPVMKQQPVAISSAPAFGIGGIASMPPLTAVAPVPMGSIPVVGRSPPLVSSVPAAGVPPLANGAPPVIQPLPAFAHPAATLPKSSSFSRSGPGSQLNTKLQKAQSFDVASVPSAAEWAVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLIDVAMSGQPLPPVLPPEYIPPSFRRVRSGSGISVISSTSVDQRLPEEPVLEDEQQQLEKKLPVTFEDKKRENFERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQERKRQLELEKQLEKQRELERQREEERRKEIERREAAKRELERQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKKTLEFELEALNDKKHQLEGKLQDIRCRLTTQRQEIESTNKSRELRIAEITHLQQQLQESQQMLGRLIPEKQILNDQLKQVQQNRDSLLTLKRALEAKELARQQLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQKQKSIEAERLKQKEQERKIIELEKQKEEAQRRAQERDPPWLEHMHADEEQPRPRKPHEEEKLRREESVKKKDSEEKGKQEMQDKLSRLFHQHQEPGKPAVQAPWSTAEKGPLTISAQENVKVVYYRALYPFESRSHDEITIQPGDIVMVRKTPVDESQTGEPGWLGGELKGKTGWFPANYAEKIPENEVPGPVKPVSDTTSTPAPKLAVRETPTSSAVTSAEPSTTPNNWADFSSTWHSSTNEKPETDNWDAWAAQPSLTVPSAGQLRQRSAFTPATATGSSPSPVLGQGEKVEGLQAQALYPWRAKKDNHLNFNKNDVITVLEQQDMWWFGEVQGQKGWFPKSYVKLISGPIRKSTSIDSGSSESPASLKRVASPAAKPAPSGEEFIAMYTYESSEQGDLTFQQGDVILVTKKDGDWWTGTVGDKSGVFPSNYVRLKDAEGSGTAGKTGSLGKKPEIAQVIASYTATGPEQLTLAPGQLILIRKKNPGGWWEGELQARGKKRQIGWFPANYVKLLSPGTSKITPTEPPKPTAFPAVCQVIGMYDYTAQNDDELAFNKGQVINVLNKEDPDWWKGEVHGQVGLFPSNYVKLTTDMDPSQQWCSDLHLLDLLTPTERKRQGYIHELIVTEENYVNDLQLVTEIFQKPLMESELLTEKEGAMIFVNWKELIMCNVKLLKALRVRKKMSGEKMPVKMIGDILTAQLPHMQPYIRFCSCQLNGAALIQQKTDEAPDFKEFVKRLAMDPRCKGMPLSSFILKPMQRVTRYPLIIKNILENTPENHPDHSHLKHALEKAEELCSQVNEGVREKENSDRLEWIQAHVQCEGLSEQLVFNSVTNCLGPRKFLHSGKLYKPRATKSCMASSSTTSSC", "length": 1485, "header": "tr|A0A5G2QFN5-1|A0A5G2QFN5_PIG Isoform 1 of Intersectin-1 OS=Sus scrofa OX=9823 GN=ITSN1 PE=1 SV=2 CANONICAL=A0A5G2QFN5-1" }, "locus": { "chromosome": "13", "start_pos": 197481156, "end_pos": 197319787, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078428.2", "url": "https://www.ensembl.org/id/ENSSSCT00000078428.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063036.2", "url": "https://www.ensembl.org/id/ENSSSCP00000063036.2" } ] } }, { "isoform_ac": "A0A8W4F6B7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F6B7/entry", "sequence": { "sequence": "MAQFPTPFGGSLDIWAITVEERAKHDQQFHSLKPISGFITGDQARNFFFQSGLPQPVLAQIWALADMNNDGRMDQVEFSIAMKLIKLKLQGYQLPSALPPVMKQQPVAISSAPAFAGVPPLANGAPPVIQPLPAFAHPAATLPKSSSFSRSGPGSQLNTKLQKAQSFDVASVPSAAEWAVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLIDVAMSGQPLPPVLPPEYIPPSFRRVRSGSGISVISSTSVDQRLPEEPVLEDEQQQLEKKLPVTFEDKKRENFERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQERKRQLELEKQLEKQRELERQREEERRKEIERREAAKRELERQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKKTLEFELEALNDKKHQLEGKLQDIRCRLTTQRQEIESTNKSRELRIAEITHLQQQLQESQQMLGRLIPEKQILNDQLKQVQQNIDSLLTLKRALEAKELARQQLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQKQKSIEAERLKQKEQERKIIELEKQKEEAQRRAQERDPPWLEHMHADEEQPRPRKPHEEEKLRREESVKKKDSEEKGKQEMQDKLSRLFHQHQEPGKPAVQAPWSTAEKGPLTISAQENVKVVYYRALYPFESRSHDEITIQPGDIVMVDESQTGEPGWLGGELKGKTGWFPANYAEKIPENEVPGPVKPVSDTTSTPAPKLAVRETPTSSAVTSAEPSTTPNNWADFSSTWHSSTNEKPETDNWDAWAAQPSLTVPSAGQLRQRSAFTPATATGSSPSPVLGQVRTSEGAGGPSVRILNTLCHRKNS", "length": 888, "header": "tr|A0A8W4F6B7-1|A0A5G2QFN5_PIG Computationally mapped isoform of Intersectin-1 OS=Sus scrofa OX=9823 GN=ITSN1 PE=1 SV=1 CANONICAL=A0A5G2QFN5-1" }, "locus": { "chromosome": "13", "start_pos": 197420094, "end_pos": 197319787, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000101219.1", "url": "https://www.ensembl.org/id/ENSSSCT00000101219.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074657.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074657.1" } ] } }, { "isoform_ac": "A0A8W4F917-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F917/entry", "sequence": { "sequence": "MAQFPTPFGGSLDIWAITVEERAKHDQQFHSLKPISGFITGDQARNFFFQSGLPQPVLAQIWALADMNNDGRMDQVEFSIAMKLIKLKLQGYQLPSALPPVMKQQPVAISSAPAFGIGGIASMPPLTAVAPVPMGSIPVVGRSPPLVSSVPAAGVPPLANGAPPVIQPLPAFAHPAATLPKSSSFSRSGPGSQLNTKLQKAQSFDVASVPSAAEWAVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLIDVAMSGQPLPPVLPPEYIPPSFRRVRSGSGISVISSTSVDQRLPEEPVLEDEQQQLEKKLPVTFEDKKRENFERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQERKRQLELEKQLEKQRELERQREEERRKEIERREAAKRELERQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKKTLEFELEALNDKKHQLEGKLQDIRCRLTTQRQEIESTNKSRELRIAEITHLQQQLQESQQMLGRLIPEKQILNDQLKQVQQNIDSLLTLKRALEAKELARQQLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQKQKSIEAERLKQKEQERKIIELEKQKEEAQRRAQERDPPWLEHMHADEEQPRPRKPHEEEKLRREESVKKKDSEEKGKQEMQDKLSRLFHQHQEPGKPAVQAPWSTAEKGPLTISAQENVKVVYYRALYPFESRSHDEITIQPGDIVMVRKTPVDESQTGEPGWLGGELKGKTGWFPANYAEKIPENEVPGPVKPVSDTTSTPAPKLAVRETPTSSAVTSAEPSTTPNNWADFSSTWHSSTNEKPETDNWDAWAAQPSLTVPSAGQLRQRSAFTPATATGSSPSPVLGQGEKVEGLQAQALYPWRAKKDNHLNFNKNDVITVLEQQDMWWFGEVQGQKGWFPKSYVKLISGPIRKSTSIDSGSSESPASLKRVASPAAKPAPSGEEFIAMYTYESSEQGDLTFQQGDVILVTKKDGDWWTGTVGDKSGVFPSNYVRLKDAEGSGTAGKTGSLGKKPEIAQVIASYTATGPEQLTLAPGQLILIRKKNPGGWWEGELQARGKKRQIGWFPANYVKLLSPGTSKITPTEPPKPTAFPAVCQVIGMYDYTAQNDDELAFNKGQVINVLNKEDPDWWKGEVHGQVGLFPSNYVKLTTDMDPSQQCKCPRGLACLSSLVSPGQTCSIALILPSLVCRTCKVPPLLHSQQSL", "length": 1263, "header": "tr|A0A8W4F917-1|A0A5G2QFN5_PIG Computationally mapped isoform of Intersectin-1 OS=Sus scrofa OX=9823 GN=ITSN1 PE=1 SV=1 CANONICAL=A0A5G2QFN5-1" }, "locus": { "chromosome": "13", "start_pos": 197443576, "end_pos": 197319787, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000094133.1", "url": "https://www.ensembl.org/id/ENSSSCT00000094133.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075315.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075315.1" } ] } }, { "isoform_ac": "A0A8W4F9F2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9F2/entry", "sequence": { "sequence": "MAQFPTPFGGSLDIWAITVEERAKHDQQFHSLKPISGFITGDQARNFFFQSGLPQPVLAQIWALADMNNDGRMDQVEFSIAMKLIKLKLQGYQLPSALPPVMKQQPVAISSAPAFGIGGIASMPPLTAVAPVPMGSIPVVGRSPPLVSSVPAAGVPPLANGAPPVIQPLPAFAHPAATLPKSSSFSRSGPGSQLNTKLQKAQSFDVASVPSAAEWAVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLIDVAMSGQPLPPVLPPEYIPPSFRRVRSGSGISVISSTSVDQRLPEEPVLEDEQQQLEKKLPVTFEDKKRENFERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQERKRQLELEKQLEKQRELERQREEERRKEIERREAAKRELERQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKKTLEFELEALNDKKHQLEGKLQDIRCRLTTQRQEIESTNKSRELRIAEITHLQQQLQESQQMLGRLIPEKQILNDQLKQVQQNSLHRDSLLTLKRALEAKELARQQLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQKQKSIEAERLKQKEQERKIIELEKQKEEAQRRAQERDPPWLEHMHADEEQPRPRKPHEEEKLRREESVKKKDSEEKGKQEMQDKLSRLFHQHQEPGKPAVQAPWSTAEKGPLTISAQENVKVVYYRALYPFESRSHDEITIQPGDIVMVKGEWVDESQTGEPGWLGGELKGKTGWFPANYAEKIPENEVPGPVKPVSDTTSTPAPKLAVRETPTSSAVTSAEPSTTPNNWADFSSTWHSSTNEKPETDNWDAWAAQPSLTVPSAGQLRQRSAFTPATATGSSPSPVLGQGEKVEGLQAQALYPWRAKKDNHLNFNKNDVITVLEQQDMWWFGEVQGQKGWFPKSYVKLISGPIRKSTSIDSGSSESPASLKRVASPAAKPAPSGEEFIAMYTYESSEQGDLTFQQGDVILVTKKDGDWWTGTVGDKSGVFPSNYVRLKDAEGSGTAGKTGSLGKKPEIAQVIASYTATGPEQLTLAPGQLILIRKKNPGGWWEGELQARGKKRQIGWFPANYVKLLSPGTSKITPTEPPKPTAFPAVCQVIGMYDYTAQNDDELAFNKGQVINVLNKEDPDWWKGEVHGQVGLFPSNYVKLTTDMDPSQQ", "length": 1220, "header": "tr|A0A8W4F9F2-1|A0A5G2QFN5_PIG Computationally mapped isoform of Intersectin-1 OS=Sus scrofa OX=9823 GN=ITSN1 PE=1 SV=1 CANONICAL=A0A5G2QFN5-1" }, "locus": { "chromosome": "13", "start_pos": 197443439, "end_pos": 197319787, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000094150.1", "url": "https://www.ensembl.org/id/ENSSSCT00000094150.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075456.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075456.1" } ] } }, { "isoform_ac": "A0A8W4FIR4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FIR4/entry", "sequence": { "sequence": "QQFHSLKPISGFITGDQARNFFFQSGLPQPVLAQIWALADMNNDGRMDQVEFSIAMKLIKLKLQGYQLPSALPPVMKQQPVAISSAPAFGIGGIASMPPLTAVAPVPMGSIPVVGRSPPLVSSVPAAGVPPLANGAPPVIQPLPAFAHPAATLPKSSSFSRSGPGSQLNTKLQKAQSFDVASVPSAAEWAVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLIDVAMSGQPLPPVLPPEYIPPSFRRVRSGSGISVISSTSVDQRLPEEPVLEDEQQQLEKKLPVTFEDKKRENFERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQERKRQLELEKQLEKQRELERQREEERRKEIERREAAKRELERQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKKTLEFELEALNDKKHQLEGKLQDIRCRLTTQRQEIESTNKSRELRIAEITHLQQQLQESQQMYSLLTLKRALEAKELARQQLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQKQKSIEAERLKQKEQERKIIELEKQKEEAQRRAQERDPPWLEHMHADEEQPRPRKPHEEEKLRREESVKKKDSEEKGKQEMQDKLSRLFHQHQEPGKPAVQAPWSTAEKGPLTISAQENVKVVYYRALYPFESRSHDEITIQPGDIVMVRKTPVDESQTGEPGWLGGELKGKTGWFPANYAEKIPENEVPGPVKPVSDTTSTPAPKLAVRETPTSSAVTSAEPSTTPNNWADFSSTWHSSTNEKPETDNWDAWAAQPSLTVPSAGQLRQRSAFTPATATGSSPSPVLGQGEKVEGLQAQALYPWRAKKDNHLNFNKNDVITVLEQQDMWWFGEVQGQKGWFPKSYVKLISGPIRKSTSIDSGSSESPASLKRVASPAAKPAPSGEEFIAMYTYESSEQGDLTFQQGDVILVTKKDGDWWTGTVGDKSGVFPSNYVRLKDAEGSGTAGKTGSLGKKPEIAQVIASYTATGPEQLTLAPGQLILIRKKNPGGWWEGELQARGKKRQIGWFPANYVKLLSPGTSKITPTEPPKPTAFPAVCQVIGMYDYTAQNDDELAFNKGQVINVLNKEDPDWWKGEVHGQVGLFPSNYVKLTTDMDPSQQWCSDLHLLDLLTPTERKRQGYIHELIVTEENYVNDLQLVTEIFQKPLMESELLTEKEGAMIFVNWKELIMCNVKLLKALRVRKKMSGEKMPVKMIGDILTAQLPHMQPYIRFCSCQLNGAALIQQKTDEAPDFKEFVKRLAMDPRCKGMPLSSFILKPMQRVTRYPLIIKNILENTPENHPDHSHLKHALEKAEELCSQVNEGVREKENSDRLEWIQAHVQCEGLSEQLVFNSVTNCLGPRKFLHSGKLYKPRATKSCMASSSTTSSC", "length": 1437, "header": "tr|A0A8W4FIR4-1|A0A5G2QFN5_PIG Computationally mapped isoform of Intersectin-1 OS=Sus scrofa OX=9823 GN=ITSN1 PE=1 SV=1 CANONICAL=A0A5G2QFN5-1" }, "locus": { "chromosome": "13", "start_pos": 197481156, "end_pos": 197322453, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000100587.1", "url": "https://www.ensembl.org/id/ENSSSCT00000100587.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078203.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078203.1" } ] } }, { "isoform_ac": "I3LSM1-1", "url": "https://www.uniprot.org/uniprotkb/I3LSM1/entry", "sequence": { "sequence": "MAQFPTPFGGSLDIWAITVEERAKHDQQFHSLKPISGFITGDQARNFFFQSGLPQPVLAQIWALADMNNDGRMDQVEFSIAMKLIKLKLQGYQLPSALPPVMKQQPVAISSAPAFAGVPPLANGAPPVIQPLPAFAHPAATLPKSSSFSRSGPGSQLNTKLQKAQSFDVASVPSAAEWAVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLIDVAMSGQPLPPVLPPEYIPPSFRRVRSGSGISVISSTSVDQRLPEEPVLEDEQQQLEKKLPVTFEDKKRENFERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQERKRQLELEKQLEKQRELERQREEERRKEIERREAAKRELERQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKKTLEFELEALNDKKHQLEGKLQDIRCRLTTQRQEIESTNKSRELRIAEITHLQQQLQESQQMLGRLIPEKQILNDQLKQVQQNSLHRDSLLTLKRALEAKELARQQLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQKQKSIEAERLKQKEQERKIIELEKQKEEAQRRAQERDPPWLEHMHADEEQPRPRKPHEEEKLRREESVKKKDSEEKGKQEMQDKLSRLFHQHQEPGKPAVQAPWSTAEKGPLTISAQENVKVVYYRALYPFESRSHDEITIQPGDIVMVDESQTGEPGWLGGELKGKTGWFPANYAEKIPENEVPGPVKPVSDTTSTPAPKLAVRETPTSSAVTSAEPSTTPNNWADFSSTWHSSTNEKPETDNWDAWAAQPSLTVPSAGQLRQRSAFTPATATGSSPSPVLGQHRFRLLRESCE", "length": 878, "header": "tr|I3LSM1-1|A0A5G2QFN5_PIG Computationally mapped isoform of Intersectin-1 OS=Sus scrofa OX=9823 GN=ITSN1 PE=1 SV=3 CANONICAL=A0A5G2QFN5-1" }, "locus": { "chromosome": "13", "start_pos": 197424598, "end_pos": 197319787, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027819.3", "url": "https://www.ensembl.org/id/ENSSSCT00000027819.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000027114.3", "url": "https://www.ensembl.org/id/ENSSSCP00000027114.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., 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"MGFQKRPGSLLTGLSTGLLLLFSWTTLAQPTSLSALVHYPHLCQTSWDADGRRYSGFFCPRLTDTPEEAYCCHLLAAGGSCCTRAEFEALYQVNLSALEPPPILRGPGPLLALGLYSLLLLALMTADFVHFCRGRGRDPGRGSQERPSVSSAARPLQANSVEQLRKDGNELFKCGDYEGALTAYTQALDLGATPQDQAVLHRNRAACHLKLVRDSCLCSAIDKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIAGQIQEKVRYMSSTDAKVEQMFQILLDPQEKGTEKKQKASQNLVVLAREDAGAEKIFRSNGVQLLQRLLDTGEPDLMLAALRTLVGICSEHQSRTVATLSVLGTRRVVSILGVENQAVSLAACHLLQVMFDALKEGVKKGFRGKEGAIIVDPARELKVLISNLLELLTEVGVSGQGRDNALTLLIKVVPRKSPKDPNNSLTLWVIDQGLKKILEVGGSVQDPPGELTVTANSRMSASILLSKLFDDLRCDAERENFHRLCENYIKSWFEGQGLAGKLRAIQTVSCLLQGPCDAGNRALELNGVMESVIALCASEQEEEQLVAVEALIHAAGKAKRASFITANGVSLLKDLYKRSEKDRIRIRALVGLCKLGSAGGTDFSMKQFAEGSTLKLAKQCRKWLCNDQMDAGTRRWAVEGLAYLTFDADVKEEFVEDEAALKALFQLSKSEERSVLFAVASALVNCTNSYDYEEPDPKMVELAKYAKQHVPEQHPKDKPSFVRARVKKLLAAGVVSAMTCMVKTESPVLTSSCRELLSRVFLALVEEVEDRGTVVAQGGGKALIPLALEGTDVGQTKAAQALAKLTITSNPEMTFPGERIYEVVRPLVSLLHLNCSGLQNFEALMALTNLAGISERLRQKILKEKAVPMIEGYMFEEHEMIRRAATECMCNLAMSKEVQDLFEATGNDRLKLLVLYSGEDDELLRRAAAGGLAMLTSMRPSLCSRIPQVTTHWLEILQALLLSPNQELQHRGAVVVLNMVEASREMASTLMESEVLEILSVLAKGKEGPVARAAAASLGKAVEYGLIKPSQDGE", "length": 1080, "header": "tr|A0A5G2QDF5-1|A0A5G2QDF5_PIG Isoform 1 of Protein unc-45 homolog A OS=Sus scrofa OX=9823 GN=UNC45A PE=1 SV=2 CANONICAL=A0A5G2QDF5-1" }, "isoforms": [ { "isoform_ac": "A0A287A5I7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A5I7/entry", "sequence": { "sequence": "QANSVEQLRKDGNELFKCGDYEGALTAYTQALDLGATPQDQAVLHRNRAACHLKLEDYDKAESEASKAIDKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIAGQIQEKVRYMSSTDAKVEQMFQILLDPQEKGTEKKQKASQNLVVLAREDAGAEKIFRSNGVQLLQRLLDTGEPDLMLAALRTLVGICSEHQSRTVATLSVLGTRRVVSILGVENQAVSLAACHLLQVMFDALKEGVKKGFRGKEGAIIVGLKKILEVGGSVQDPPGELTVTANSRMSASILLSKLFDDLRCDAERENFHRLCENYIKSWFEGQGLAGKLRAIQTVSCLLQGPCDAGNRALELNGVMESVIALCASEQEEEQLVAVEALIHAAGKAKRASFITANGVSLLKDLYKRSEKDRIRIRALVGLCKLGSAGGTDFSMKQFAEGSTLKLAKQCRKWLCNDQMDAGTRRWAVEGLAYLTFDADVKEEFVEDEAALKALFQLSKSEERSVLFAVASALVNCTNSYDYEEPDPKMVELAKYAKQHVPEQHPKDKPSFVRARVKKLLAAGVVSAMTCMVKTESPVLTSSCRELLSRVFLALVEEVEDRGTVVAQGGGKALIPLALEGTDVGQTKAAQALAKLTITSNPEMTFPGERIYEVVRPLVSLLHLNCSGLQNFEALMALTNLAGISERLRQKILKEKAVPMIEGYMFEEHEMIRRAATECMCNLAMSKEVQDLFEATGNDRLKLLVLYSGEDDELLRRAAAGGLAMLTSMRPSLCSRIPQVTTHWLEILQALLLSPNQELQHRGAVVVLNMVEASREMASTLMESEVLEILSVLAKGKEGPVARAAAASLGKAVEYGLIKPSQDGE", "length": 871, "header": "tr|A0A287A5I7-1|A0A5G2QDF5_PIG Computationally mapped isoform of Protein unc-45 homolog A OS=Sus scrofa OX=9823 GN=UNC45A PE=1 SV=3 CANONICAL=A0A5G2QDF5-1" }, "locus": { "chromosome": "7", "start_pos": 53545595, "end_pos": 53531271, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053103.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053103.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000039230.3", "url": "https://www.ensembl.org/id/ENSSSCP00000039230.3" } ] } }, { "isoform_ac": "A0A5G2QA24-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA24/entry", "sequence": { "sequence": "MALPSASALPALPKREVAQRRKQPQEVGNKLVRYMSSTDAKVEQMFQILLDPQEKGTEKKQKASQNLVVLAREDAGAEKIFRSNGVQLLQRLLDTGEPDLMLAALRTLVGICSEHQSRTVATLSVLGTRRVVSILGVENQAVSLAACHLLQVMFDALKEGVKKGFRGKEGAIIVDPARELKVLISNLLELLTEVGVSGQGRDNALTLLIKVVPRKSPKDPNNSLTLWVIDQGLKKILEVGGSVQDPPGELTVTANSRMSASILLSKLFDDLRCDAERENFHRLCENYIKSWFEGQGLAGKLRAIQTVSCLLQGPCDAGNRALELNGVMESVIALCASEQEEEQLVAVEALIHAAGKAKRASFITANGVSLLKDLYKRSEKDRIRIRALVGLCKLGSAGGTDFSMKQFAEGSTLKLAKQCRKWLCNDQMDAGTRRWAVEGLAYLTFDADVKEEFVEDEAALKALFQLSKSEERSVLFAVASALVNCTNSYDYEEPDPKMVELAKYAKQHVPEQHPKDKPSFVRARVKKLLAAGVVSAMTCMVKTESPVLTSSCRELLSRVFLALVEEVEDRGTVVAQGGGKALIPLALEGTDVGQTKAAQALAKLTITSNPEMTFPGERIYEVVRPLVSLLHLNCSGLQNFEALMALTNLAGISERLRQKILKEKAVPMIEGYMFEEHEMIRRAATECMCNLAMSKEVQDLFEATGNDRLKLLVLYSGEDDELLRRAAAGGLAMLTSMRPSLCSRIPQVTTHWLEILQALLLSPNQELQHRGAVVVLNMVEASREMASTLMESEVLEILSVLAKGKEGPVARAAAASLGKAVEYGLIKPSQDGE", "length": 833, "header": "tr|A0A5G2QA24-1|A0A5G2QDF5_PIG Computationally mapped isoform of Protein unc-45 homolog A OS=Sus scrofa OX=9823 GN=UNC45A PE=1 SV=2 CANONICAL=A0A5G2QDF5-1" }, "locus": { "chromosome": "7", "start_pos": 53545595, "end_pos": 53534869, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083128.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083128.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060830.2", "url": "https://www.ensembl.org/id/ENSSSCP00000060830.2" } ] } }, { "isoform_ac": "A0A5G2QDF5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDF5/entry", "sequence": { "sequence": "MGFQKRPGSLLTGLSTGLLLLFSWTTLAQPTSLSALVHYPHLCQTSWDADGRRYSGFFCPRLTDTPEEAYCCHLLAAGGSCCTRAEFEALYQVNLSALEPPPILRGPGPLLALGLYSLLLLALMTADFVHFCRGRGRDPGRGSQERPSVSSAARPLQANSVEQLRKDGNELFKCGDYEGALTAYTQALDLGATPQDQAVLHRNRAACHLKLVRDSCLCSAIDKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIAGQIQEKVRYMSSTDAKVEQMFQILLDPQEKGTEKKQKASQNLVVLAREDAGAEKIFRSNGVQLLQRLLDTGEPDLMLAALRTLVGICSEHQSRTVATLSVLGTRRVVSILGVENQAVSLAACHLLQVMFDALKEGVKKGFRGKEGAIIVDPARELKVLISNLLELLTEVGVSGQGRDNALTLLIKVVPRKSPKDPNNSLTLWVIDQGLKKILEVGGSVQDPPGELTVTANSRMSASILLSKLFDDLRCDAERENFHRLCENYIKSWFEGQGLAGKLRAIQTVSCLLQGPCDAGNRALELNGVMESVIALCASEQEEEQLVAVEALIHAAGKAKRASFITANGVSLLKDLYKRSEKDRIRIRALVGLCKLGSAGGTDFSMKQFAEGSTLKLAKQCRKWLCNDQMDAGTRRWAVEGLAYLTFDADVKEEFVEDEAALKALFQLSKSEERSVLFAVASALVNCTNSYDYEEPDPKMVELAKYAKQHVPEQHPKDKPSFVRARVKKLLAAGVVSAMTCMVKTESPVLTSSCRELLSRVFLALVEEVEDRGTVVAQGGGKALIPLALEGTDVGQTKAAQALAKLTITSNPEMTFPGERIYEVVRPLVSLLHLNCSGLQNFEALMALTNLAGISERLRQKILKEKAVPMIEGYMFEEHEMIRRAATECMCNLAMSKEVQDLFEATGNDRLKLLVLYSGEDDELLRRAAAGGLAMLTSMRPSLCSRIPQVTTHWLEILQALLLSPNQELQHRGAVVVLNMVEASREMASTLMESEVLEILSVLAKGKEGPVARAAAASLGKAVEYGLIKPSQDGE", "length": 1080, "header": "tr|A0A5G2QDF5-1|A0A5G2QDF5_PIG Isoform 1 of Protein unc-45 homolog A OS=Sus scrofa OX=9823 GN=UNC45A PE=1 SV=2 CANONICAL=A0A5G2QDF5-1" }, "locus": { "chromosome": "7", "start_pos": 53545595, "end_pos": 53529605, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082625.2", "url": "https://www.ensembl.org/id/ENSSSCT00000082625.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060080.2", "url": "https://www.ensembl.org/id/ENSSSCP00000060080.2" } ] } }, { "isoform_ac": "F1RMH7-1", "url": "https://www.uniprot.org/uniprotkb/F1RMH7/entry", "sequence": { "sequence": "MCEPGAQEQSFPGGPAEHRRPDSGEVVCWADNLYTLLEGGRQTLQWYGTCPQRMPKWNRCFRYCWTRKKKALRKSRRLPLMQASQNLVVLAREDAGAEKIFRSNGVQLLQRLLDTGEPDLMLAALRTLVGICSEHQSRTVATLSVLGTRRVVSILGVENQAVSLAACHLLQVMFDALKEGVKKGFRGKEGAIIVDPARELKVLISNLLELLTEVGVSGQGRDNALTLLIKVVPRKSPKDPNNSLTLWVIDQGLKKILEVGGSVQDPPGELTVTANSRMSASILLSKLFDDLRCDAERENFHRLCENYIKSWFEGQGLAGKLRAIQTVSCLLQGPCDAGNRALELNGVMESVIALCASEQEEEQLVAVEALIHAAGKAKRASFITANGVSLLKDLYKRSEKDRIRIRALVGLCKLGSAGGTDFSMKQFAEGSTLKLAKQCRKWLCNDQMDAGTRRWAVEGLAYLTFDADVKEEFVEDEAALKALFQLSKSEERSVLFAVASALVNCTNSYDYEEPDPKMVELAKYAKQHVPEQHPKDKPSFVRARVKKLLAAGVVSAMTCMVKTESPVLTSSCRELLSRVFLALVEEVEDRGTVVAQGGGKALIPLALEGTDVGQTKAAQALAKLTITSNPEMTFPGERIYEVVRPLVSLLHLNCSGLQNFEALMALTNLAGISERLRQKILKEKAVPMIEGYMFEEHEMIRRAATECMCNLAMSKEVQDLFEATGNDRLKLLVLYSGEDDELLRRAAAGGLAMLTSMRPSLCSRIPQVTTHWLEILQALLLSPNQELQHRGAVVVLNMVEASREMASTLMESEVLEILSVLAKGKEGPVARAAAASLGKAVEYGLIKPSQDGE", "length": 853, "header": "tr|F1RMH7-1|A0A5G2QDF5_PIG Computationally mapped isoform of Protein unc-45 homolog A OS=Sus scrofa OX=9823 GN=UNC45A PE=1 SV=4 CANONICAL=A0A5G2QDF5-1" }, "locus": { "chromosome": "7", "start_pos": 53545595, "end_pos": 53532105, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002040.5", "url": "https://www.ensembl.org/id/ENSSSCT00000002040.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000001991.5", "url": "https://www.ensembl.org/id/ENSSSCP00000001991.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA24", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA24" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "cell differentiation", "id": "GO:0030154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030154", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDF5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDF5" } ], "pmid": "" }, { "name": "muscle organ development", "id": "GO:0007517", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007517", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDF5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDF5" } ], "pmid": "" }, { "name": "protein folding", "id": "GO:0006457", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006457", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDF5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDF5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "perinuclear region of cytoplasm", "id": "GO:0048471", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048471", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDF5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDF5" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDF5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDF5" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDF5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDF5" } ], "pmid": "" }, { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDF5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDF5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDF5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDF5" } ], "pmid": "" }, { "name": "Hsp90 protein binding", "id": "GO:0051879", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051879", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDF5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDF5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 468, "end_pos": 470, "annotation": "n_glycosylation_sequon" }, { "start_pos": 731, "end_pos": 733, "annotation": "n_glycosylation_sequon" }, { "start_pos": 880, "end_pos": 882, "annotation": "n_glycosylation_sequon" }, { "start_pos": 94, "end_pos": 96, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QDF5-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1080, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QDF5-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QDF5" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QDF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDF5" }, { "id": "PF11701", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF11701" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "UNC-45/Cro1/She4 central", "eco_id": "ECO_0000259", "start_pos": 450, "end_pos": 666, "start_aa": "Asn", "end_aa": "Cys", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 468, "end_pos": 470 }, { "start_pos": 731, "end_pos": 733 }, { "start_pos": 880, "end_pos": 882 }, { "start_pos": 94, "end_pos": 96 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2Q7V8-1", "uniprot_ac": "A0A5G2Q7V8", "uniprot_id": "A0A5G2Q7V8_PIG", "mass": { "chemical_mass": 171500.0, "monoisotopic_mass": 171500.0 }, "refseq": {}, "gene_names": [ { "name": "DIP2B", "type": "recommended", "evidence": [ { "id": "A0A5G2Q7V8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7V8" } ] } ], "protein_names": [ { "name": "Disco interacting B", "type": "synonym", "evidence": [ { "id": "A0A5G2Q7V8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7V8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q7V8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7V8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DIP2B", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7V8", "locus": { "chromosome": "5", "start_pos": 16603164, "end_pos": 16373042, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000029196", "url": "https://www.ensembl.org/id/ENSSSCG00000029196" } ] } } ], "crossref": [ { "id": "ENSSSCG00000029196", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000029196", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd05905", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd05905", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000873", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000873", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR010506", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010506", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR025110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037337", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037337", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042099", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042099", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045851", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045851", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "FYACLYI", "url": "https://omabrowser.org/oma/group/FYACLYI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR22754", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22754", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22754:SF38", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22754:SF38", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00501", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00501", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF06464", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06464", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23024", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23024", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287AC53", "url": "https://www.uniprot.org/uniprotkb/A0A287AC53", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AC53-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AC53-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q7V8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7V8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q7V8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7V8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RGK2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RGK2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RGK2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RGK2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RH27", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RH27", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RH27-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RH27-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FQH1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FQH1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FQH1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FQH1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FQH3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FQH3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FQH3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FQH3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L8J8", "url": "https://www.uniprot.org/uniprotkb/I3L8J8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L8J8-1", "url": "https://www.uniprot.org/uniprotkb/I3L8J8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAERGLEPAPAAVAALPPEVRAQLAELELELSEGDITQKGYEKKRSKLLSPYIPQTQETDSAVQKEHRNQTPAPSAPQTSAPSKYHRTRSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAVLQQSLQNAESWINRSIQGSSTSSSASSTLSHGEVKGTSGSLADVFANTRIENFSAPPDVTTTTSSSSSSSSIRPANIDLPPSGIVKGMHKGSNRSSLMDTADGVPVNSRVSTKIQQLLNTLKRPKRPPLKEFFVDDSEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVICNWPPALESALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFHGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTSEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKPPKDWQPHISPAGTEPAYIEYKTSKEGSVMGVTVSRLAMLSHCQALSQACNYSEGETVVNVLDFKKDAGLWHGMFANVMNKMHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSAEAMTVAIRRPGVPGAPLPGRAILSMNGLSYGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGPPQLCKTDEIGEICVSSRTGGMMYFGLAGVTKNTFEVIPVNSAGSPVGDVPFIRSGLLGFVGPGSLVFVVGKMDGLLMVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQLFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQAAGRDLGQIEENDLVRKHQFLAEILQWRAQATPDHVLFMLLNAKGTTVCTASCLQLHKRAERIAAVLGDKGHLNAGDNVVLLYPPGIELIAAFYGCLYAGCIPVTVRPPHQNLTATLPTVRMIVDVSKAACILTTQTLMRLLRSREAAAAVDVKTWPTIIDTDDLPRKRLPQLYKPPTPEMLAYLDFSVSTTGMLTGVKMSHSAVNALCRAIKLQCELYSSRQIAICLDPYCGLGFALWCLCSVYSGHQSILIPPMELENNLFLWLSTVNQYKIRDTFCSYSVMELCTKGLGNQVEVLKTRGINLSCIRTCVVVAEERPRIALQQSFSKLFKDIGLSPRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPVGDSHLGEIWVNSPHTASGYYTIYDSETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAATGERHDALYVVGALDETLELRGLRYHPIDIETSVSRVHRSIAECAVFTWTNLLVVVVELCGSEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM", "length": 1575, "header": "tr|A0A5G2Q7V8-1|A0A5G2Q7V8_PIG Isoform 1 of Disco interacting B OS=Sus scrofa OX=9823 GN=DIP2B PE=1 SV=1 CANONICAL=A0A5G2Q7V8-1" }, "isoforms": [ { "isoform_ac": "A0A287AC53-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AC53/entry", "sequence": { "sequence": "CLLSLIDFRQLPEPVLLEQVHNIVWIRVSRDITQKGYEKKRSKLLSPYIPQTQVQKEHRNQTPAPSAPQTSAPSKYHRTRSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAVLQQSLQNAESWINRSIQGSSTSSSASSTLSHGEVKGTSGSLADVFANTRIGRSWNFSAPPDVTTTTSSSSSSSSIRPANIDLPPSGIVKGMHKGSNRSSLMDTADGVPVNSRVSTKIQQLLNTLKRPKRPPLKEFFVDDSEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVICNWPPALESALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFHGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTSEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKPPKDWQPHISPAGTEPAYIEYKTSKEGSVMGVTVSRLAMLSHCQALSQACNYSEGETVVNVLDFKKDAGLWHGMFANVMNKMHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSAEAMTVAIRRPGVPGAPLPGRAILSMNGLSYGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGPPQLCKTDEIGEICVSSRTGGMMYFGLAGVTKNTFEVIPVNSAGSPVGDVPFIRSGLLGFVGPGSLVFVVGKMDGLLMVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQLFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQAAGRDLGQIEENDLVRKHQFLAEILQWRAQATPDHVLFMLLNAKGTTVCTASCLQLHKRAERIAAVLGDKGHLNAGDNVVLLYPPGIELIAAFYGCLYAGCIPVTVRPPHARTSRPRCPLSVSKAACILTTQTLMRLLRSREAAAAVDVKTWPTIIDTDDLPRKRLPQLYKPPTPEMLAYLDFSVSTTGMLTGVKMSHSAVNALCRAIKLQCELYSSRQIAICLDPYCGLGFALWCLCSVYSGHQSILIPPMELENNLFLWLSTVNQYKIRDTFCSYSVMELCTKGLGNQVEVLKTRGINLSCIRTCVVVAEERPRIALQQSFSKLFKDIGLSPRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPVGDSHLGEIWVNSPHTASGYYTIYDSETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAATGERHDALYVVGALDETLELRGLRYHPIDIETSVSRVHRSIAECAVFTWTNLLVVVVELCGSEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM", "length": 1565, "header": "tr|A0A287AC53-1|A0A5G2Q7V8_PIG Computationally mapped isoform of Disco interacting B OS=Sus scrofa OX=9823 GN=DIP2B PE=1 SV=1 CANONICAL=A0A5G2Q7V8-1" }, "locus": { "chromosome": "5", "start_pos": 16601042, "end_pos": 16481138, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047499.3", "url": "https://www.ensembl.org/id/ENSSSCT00000047499.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041543.1", "url": "https://www.ensembl.org/id/ENSSSCP00000041543.1" } ] } }, { "isoform_ac": "A0A5G2Q7V8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7V8/entry", "sequence": { "sequence": "MAERGLEPAPAAVAALPPEVRAQLAELELELSEGDITQKGYEKKRSKLLSPYIPQTQETDSAVQKEHRNQTPAPSAPQTSAPSKYHRTRSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAVLQQSLQNAESWINRSIQGSSTSSSASSTLSHGEVKGTSGSLADVFANTRIENFSAPPDVTTTTSSSSSSSSIRPANIDLPPSGIVKGMHKGSNRSSLMDTADGVPVNSRVSTKIQQLLNTLKRPKRPPLKEFFVDDSEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVICNWPPALESALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFHGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTSEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKPPKDWQPHISPAGTEPAYIEYKTSKEGSVMGVTVSRLAMLSHCQALSQACNYSEGETVVNVLDFKKDAGLWHGMFANVMNKMHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSAEAMTVAIRRPGVPGAPLPGRAILSMNGLSYGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGPPQLCKTDEIGEICVSSRTGGMMYFGLAGVTKNTFEVIPVNSAGSPVGDVPFIRSGLLGFVGPGSLVFVVGKMDGLLMVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQLFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQAAGRDLGQIEENDLVRKHQFLAEILQWRAQATPDHVLFMLLNAKGTTVCTASCLQLHKRAERIAAVLGDKGHLNAGDNVVLLYPPGIELIAAFYGCLYAGCIPVTVRPPHQNLTATLPTVRMIVDVSKAACILTTQTLMRLLRSREAAAAVDVKTWPTIIDTDDLPRKRLPQLYKPPTPEMLAYLDFSVSTTGMLTGVKMSHSAVNALCRAIKLQCELYSSRQIAICLDPYCGLGFALWCLCSVYSGHQSILIPPMELENNLFLWLSTVNQYKIRDTFCSYSVMELCTKGLGNQVEVLKTRGINLSCIRTCVVVAEERPRIALQQSFSKLFKDIGLSPRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPVGDSHLGEIWVNSPHTASGYYTIYDSETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAATGERHDALYVVGALDETLELRGLRYHPIDIETSVSRVHRSIAECAVFTWTNLLVVVVELCGSEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM", "length": 1575, "header": "tr|A0A5G2Q7V8-1|A0A5G2Q7V8_PIG Isoform 1 of Disco interacting B OS=Sus scrofa OX=9823 GN=DIP2B PE=1 SV=1 CANONICAL=A0A5G2Q7V8-1" }, "locus": { "chromosome": "5", "start_pos": 16601042, "end_pos": 16373181, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071945.2", "url": "https://www.ensembl.org/id/ENSSSCT00000071945.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059926.1", "url": "https://www.ensembl.org/id/ENSSSCP00000059926.1" } ] } }, { "isoform_ac": "A0A5G2RGK2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RGK2/entry", "sequence": { "sequence": "MAERGLEPAPAAVAALPPEVRAQLAELELELSEGDITQKGYEKKRSKLLSPYIPQTQETDSAVQKEHRNQTPAPSAPQTSAPSKYHRTRSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAVLQQSLQNAESWINRSIQGSSTSSSASSTLSHGEVKGTSGSLADVFANTRIENFSAPPDVTTTTSSSSSSSSIRPANIDLPPSGIVKGMHKGSNRSSLMDTADGVPVNSRVSTKIQQLLNTLKRPKRPPLKEFFVDDSEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVICNWPPALESALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFHGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTSEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKPPKDWQPHISPAGTEPAYIEYKTSKEGSVMGVTVSRLAMLSHCQALSQACNYSEGETVVNVLDFKKDAGLWHGMFANVMNKMHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSAEAMTVAIRRPGVPGAPLPGRAILSMNGLSYGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGPPQLCKTDEIGEICVSSRTGGMMYFGLAGVTKNTFEVIPVNSAGSPVGDVPFIRSGLLGFVGPGSLVFVVGKMDGLLMVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQLFLEGSLHPCNILMHRVNCCVLRLPVRRLHTCDCPPSSCQNLTATLPTVRMIVDVSKAACILTTQTLMRLLRSREAAAAVDVKTWPTIIDTDDLPRKRLPQLYKPPTPEMLAYLDFSVSTTGMLTGVKMSHSAVNALCRAIKLQCELYSSRQIAICLDPYCGLGFALWCLCSVYSGHQSILIPPMELENNLFLWLSTVNQYKIRDTFCSYSVMELCTKGLGNQVEVLKTRGINLSCIRTCVVVAEERPRIALQQSFSKLFKDIGLSPRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPVGDSHLGEIWVNSPHTASGYYTIYDSETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAATGERHDALYVVGALDETLELRGLRYHPIDIETSVSRVHRSIAECAVFTWTNLLVVVVELCGSEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM", "length": 1453, "header": "tr|A0A5G2RGK2-1|A0A5G2Q7V8_PIG Computationally mapped isoform of Disco interacting B OS=Sus scrofa OX=9823 GN=DIP2B PE=1 SV=1 CANONICAL=A0A5G2Q7V8-1" }, "locus": { "chromosome": "5", "start_pos": 16601042, "end_pos": 16373181, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082380.2", "url": "https://www.ensembl.org/id/ENSSSCT00000082380.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074138.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074138.1" } ] } }, { "isoform_ac": "A0A5G2RH27-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RH27/entry", "sequence": { "sequence": "PPLVVTKMSPDIHGQLSPGGKRDITQKGYEKKRSKLLSPYIPQTQETDSAVQKEHRNQTPAPSAPQTSAPSKYHRTRSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAVLQQSLQNAESWINRSIQGSSTSSSASSTLSHGEVKGTSGSLADVFANTRIENFSAPPDVTTTTSSSSSSSSIRPANIDLPPSGIVKGMHKGSNRSSLMDTADGVPVNSRVSTKIQQLLNTLKRPKRPPLKEFFVDDSEEIVEGIPQPDPNQPKPEGRQMTPVKGEPLGVICNWPPALESALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFHGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTSEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKPPKDWQPHISPAGTEPAYIEYKTSKEGSVMGVTVSRLAMLSHCQALSQACNYSEGETVVNVLDFKKDAGLWHGMFANVMNKMHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSAEAMTVAIRRPGVPGAPLPGRAILSMNGLSYGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGPPQLCKTDEIGEICVSSRTGGMMYFGLAGVTKNTFEVIPVNSAGSPVGDVPFIRSGLLGFVGPGSLVFVVGKMDGLLMVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQLFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQAAGRDLGQIEENDLVRKHQFLAEILQWRAQATPDHVLFMLLNAKGTTVCTASCLQLHKRAERIAAVLGDKGHLNAGDNVVLLYPPGIELIAAFYGCLYAGCIPVTVRPPHARTSRPRCPLSVSKAACILTTQTLMRLLRSREAAAAVDVKTWPTIIDTDDLPRKRLPQLYKPPTPEMLAYLDFSVSTTGMLTGVKMSHSAVNALCRAIKLQCELYSSRQIAICLDPYCGLGFALWCLCSVYSGHQSILIPPMELENNLFLWLSTVNQYKIRDTFCSYSVMELCTKGLGNQVEVLKTRGINLSCIRTCVVVAEERPRIALQQSFSKLFKDIGLSPRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPVGDSHLGEIWVNSPHTASGYYTIYDSETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAATGERHDALYVVGALDETLELRGLRYHPIDIETSVSRVHRSIAECAVFTWTNLLVVVVELCGSEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM", "length": 1560, "header": "tr|A0A5G2RH27-1|A0A5G2Q7V8_PIG Computationally mapped isoform of Disco interacting B OS=Sus scrofa OX=9823 GN=DIP2B PE=1 SV=1 CANONICAL=A0A5G2Q7V8-1" }, "locus": { "chromosome": "5", "start_pos": 16601042, "end_pos": 16481337, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077284.2", "url": "https://www.ensembl.org/id/ENSSSCT00000077284.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070595.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070595.1" } ] } }, { "isoform_ac": "A0A8W4FQH1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FQH1/entry", "sequence": { "sequence": "MAERGLEPAPAAVAALPPEVRAQLAELELELSEGDITQKGYEKKRSKLLSPYIPQTQETDSAVQKEHRNQTPAPSAPQTSAPSKYHRTRSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAVLQQSLQNAESWINRSIQGSSTSSSASSTLSHGEVKGTSGSLADVFANTRIENFSAPPDVTTTTSSSSSSSSIRPANIDLPPSGIVKGMHKGSNRSSLMDTADGVPVNSRVSTKIQQLLNTLKRPKRPPLKEFFVDDSEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVICNWPPALESALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFHGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTSEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKPPKDWQPHISPAGTEPAYIEYKTSKEGSVMGVTVSRLAMLSHCQALSQACNYSEGETVVNVLDFKKDAGLWHGMFANVMNKMHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSAEAMTVAIRMMCIVKPDGPPQLCKTDEIGEICVSSRTGGMMYFGLAGVTKNTFEVIPVNSAGSPVGDVPFIRSGLLGFVGPGSLVFVVGKMDGLLMVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQLFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQAAGRDLGQIEENDLVRKHQFLAEILQWRAQATPDHVLFMLLNAKGTTVCTASCLQLHKRAERIAAVLGDKGHLNAGDNVVLLYPPGIELIAAFYGCLYAGCIPVTVRPPHQNLTATLPTVRMIVDVSKAACILTTQTLMRLLRSREAAAAVDVKTWPTIIDTDDLPRKRLPQLYKPPTPEMLAYLDFSVSTTGMLTGVKMSHSAVNALCRAIKLQCELYSSRQIAICLDPYCGLGFALWCLCSVYSGHQSILIPPMELENNLFLWLSTVNQYKIRDTFCSYSVMELCTKGLGNQVEVLKTRGINLSCIRTCVVVAEERPRIALQQSFSKLFKDIGLSPRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPVGDSHLGEIWVNSPHTASGYYTIYDSETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAATGERHDALYVVGALDETLELRGLRYHPIDIETSVSRVHRSIAECAVFTWTNLLVVVVELCGSEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM", "length": 1527, "header": "tr|A0A8W4FQH1-1|A0A5G2Q7V8_PIG Computationally mapped isoform of Disco interacting B OS=Sus scrofa OX=9823 GN=DIP2B PE=1 SV=1 CANONICAL=A0A5G2Q7V8-1" }, "locus": { "chromosome": "5", "start_pos": 16601042, "end_pos": 16373181, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102604.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102604.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080634.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080634.1" } ] } }, { "isoform_ac": "A0A8W4FQH3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FQH3/entry", "sequence": { "sequence": "MQHIALLGWCRDKPCNFPPEVRDITQKGYEKKRSKLLSPYIPQTQETDSAVQKEHRNQTPAPSAPQTSAPSKYHRTRSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAVLQQSLQNAESWINRSIQGSSTSSSASSTLSHGEVKGTSGSLADVFANTRIENFSAPPDVTTTTSSSSSSSSIRPANIDLPPSGIVKGMHKGSNRSSLMDTADGVPVNSRVSTKIQQLLNTLKRPKRPPLKEFFVDDSEEIVEGIPQPDPNQPKPEGRQMTPVKGEPLGVICNWPPALESALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFHGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTSEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKPPKDWQPHISPAGTEPAYIEYKTSKEGSVMGVTVSRLAMLSHCQALSQACNYSEGETVVNVLDFKKDAGLWHGMFANVMNKMHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSAEAMTVAIRRPGVPGAPLPGRAILSMNGLSYGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGPPQLCKTDEIGEICVSSRTGGMMYFGLAGVTKNTFEVIPVNSAGSPVGDVPFIRSGLLGFVGPGSLVFVVGKMDGLLMVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQLFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQAAGRDLGQIEENDLVRKHQFLAEILQWRAQATPDHVLFMLLNAKGTTVCTASCLQLHKRAERIAAVLGDKGHLNAGDNVVLLYPPGIELIAAFYGCLYAGCIPVTVRPPHARTSRPRCPLSVSKAACILTTQTLMRLLRSREAAAAVDVKTWPTIIDTDDLPRKRLPQLYKPPTPEMLAYLDFSVSTTGMLTGVKMSHSAVNALCRAIKLQCELYSSRQIAICLDPYCGLGFALWCLCSVYSGHQSILIPPMELENNLFLWLSTVNQYKIRDTFCSYSVMELCTKGLGNQVEVLKTRGINLSCIRTCVVVAEERPRIALQQSFSKLFKDIGLSPRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPVGDSHLGEIWVNSPHTASGYYTIYDSETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAATGERHDALYVVGALDETLELRGLRYHPIDIETSVSRVHRSIEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM", "length": 1537, "header": "tr|A0A8W4FQH3-1|A0A5G2Q7V8_PIG Computationally mapped isoform of Disco interacting B OS=Sus scrofa OX=9823 GN=DIP2B PE=1 SV=1 CANONICAL=A0A5G2Q7V8-1" }, "locus": { "chromosome": "5", "start_pos": 16601042, "end_pos": 16483750, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092248.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092248.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000081264.1", "url": "https://www.ensembl.org/id/ENSSSCP00000081264.1" } ] } }, { "isoform_ac": "I3L8J8-1", "url": "https://www.uniprot.org/uniprotkb/I3L8J8/entry", "sequence": { "sequence": "YIPQTQETDSAVQKEHRNQTPAPSAPQTSAPSKYHRTRSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAVLQQSLQNAESWINRSIQGSSTSSSASSTLSHGEVKGTSGSLADVFANTRIENFSAPPDVTTTTSSSSSSSSIRPANIDLPPSGIVKGMHKGSNRSSLMDTADGVPVNSRVSTKIQQLLNTLKRPKRPPLKEFFVDDSEEIVEGIPQPDPNQPKPEGRQMTPVKGEPLGVICNWPPALESALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFHGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTSEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKPPKDWQPHISPAGTEPAYIEYKTSKEGSVMGVTVSRLAMLSHCQALSQACNYSEGETVVNVLDFKKDAGLWHGMFANVMNKMHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSAEAMTVAIRRPGVPGAPLPGRAILSMNGLSYGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGPPQLCKTDEIGEICVSSRTGGMMYFGLAGVTKNTFEVIPVNSAGSPVGDVPFIRSGLLGFVGPGSLVFVVGKMDGLLMVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQLFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQAAGRDLGQIEENDLVRKHQFLAEILQWRAQATPDHVLFMLLNAKGTTVCTASCLQLHKRAERIAAVLGDKGHLNAGDNVVLLYPPGIELIAAFYGCLYAGCIPVTVRPPHARTSRPRCPLSVSKAACILTTQTLMRLLRSREAAAAVDVKTWPTIIDTDDLPRKRLPQLYKPPTPEMLAYLDFSVSTTGMLTGVKMSHSAVNALCRAIKLQCELYSSRQIAICLDPYCGLGFALWCLCSVYSGHQSILIPPMELENNLFLWLSTVNQYKIRDTFCSYSVMELCTKGLGNQVEVLKTRGINLSCIRTCVVVAEERPRIALQQSFSKLFKDIGLSPRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPVGDSHLGEIWVNSPHTASGYYTIYDSETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAATGERHDALYVVGALDETLELRGLRYHPIDIETSVSRVHRSIAECLTESLDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM", "length": 1503, "header": "tr|I3L8J8-1|A0A5G2Q7V8_PIG Computationally mapped isoform of Disco interacting B OS=Sus scrofa OX=9823 GN=DIP2B PE=1 SV=4 CANONICAL=A0A5G2Q7V8-1" }, "locus": { "chromosome": "5", "start_pos": 16601042, "end_pos": 16484038, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028346.4", "url": "https://www.ensembl.org/id/ENSSSCT00000028346.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020358.4", "url": "https://www.ensembl.org/id/ENSSSCP00000020358.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L8J8", "url": "https://www.uniprot.org/uniprotkb/I3L8J8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q2U035-1", "protein_name": "Disco interacting B", "gene_name": "DIP2B", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAEPAAAGISSLPREVREQLAELELELSEGDITQKGYEKKRAKLLAPYVPQTQGVDPALQKESRTQTPTPSATPAPAPSSSSSKFHRARSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAALHQSLQNAESWINRSIQGSSTSSSASSTLSHGEGKGTSGSLADVFANTRIENFSVPPDVTATTSSSSTRPAAIDLPPSGIVKGMHKGSNRSSLMDTADGVPVSSRVSTKIQQLLNTLKRPKRPPLKEFFVDDFEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVVCNWPPALEAALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTTEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKSPKDWQPNISAAGTEPAYIEYKTSKEGSVMGVTVSRIAMLSHCQALSQACNYSEGETIVNVLDFKKDAGLWHGILTNVMNKLHTISVPYSVMKTCPLSWVQRVHTHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSPEAMTIAIRRPGVPGAPLPGRAILSMNGLSFGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGAPQLCKTDEIGEICVSSRAGGMMYYGLAGLTKSTFEVIPLNSAGSPVGDVPFVRSGLLGFVGPGSLVFVVGKMDGLLTVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQHFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQASGRDLGQIEDNDLVKKHQFLTEVLQWRAHTTPDHALFLLLNAKGTAVCTATCLQLHKKAERIASVLCDKGHLNAGDNVVLLYPPGIELITAFYGCLYAGCIPVTVRPPHAQSLTATLPTVRMIVEVSKAACILTTQTLMRLLKSREAAAAVDVKTWPTIIDTDDLPRKRLSQIYKPPTSEMLAYLDFSVSTTGMLTGVKMSHAAVSGLCRAIKLQCELYSSRQIAICLDPYCGLGFVLWCLCSVYSGHQSILIPPMELESNLSLWLSTVSQHKIRDTFCSYSVMELCTKGLGNQVETLKARGINLSCVRTCVVVAEERPRVSLTHSFSKLFKDIGLSSRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPLGDSHLGEIWVNSPHTASGYYTIYDNETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAASGERHDALYVVGALDETLELRGLRYHPIDIETSVSRTHRSIAECAVFTWTNLLVVVVELCGCEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM", "length": 1572 }, "evidence": [ { "id": "A0A5G2Q7V8", "url": "https://omabrowser.org/oma/group/A0A5G2Q7V8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0ABK0M0J6-1", "protein_name": "Disco-interacting protein 2 homolog B", "gene_name": "Dip2b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAERGLEPSPAAVAALPPEVRAQLAELELELSEGDITQKGYEKKRSKLLSPYSPQTQETDSTGQKERNQTPAPTAAQTSAPSKYHRSRSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAALQQSLQNAESWINRSIQGSSTSSSASSTLSHGEVKGTSGSLADVFANTRIENVSAPPDVTATTSSSSSLLRPANIDLPPSGIVKGMHKGSNRSSLMDTADGVPVNSRVSTKIQQLLNTLKRPKRPPLKEFFVDDSEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVICNWPPALESALQRWGTTQAKCPCLTGLDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTSEICLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKPPKDWQPHISPAGTEPAYIEYKTSKEGSVMGVTVSRLAMLSHCQALSQACSYSEGETVVNVLDFKKDAGLWHGMFANVMNKMHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSAEAMTIAIRRPGVPGAPLPGRAILSMNGLSYGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGLPQLCKTDEIGEICVSSRTGGMMYFGLAGVTKNTFEVIPVTSSGSPVGDVPFIRSGLLGFVGPGSLVFVVGKMDGLLMVSGRRHNADDIVATGLAVESIKTVYRGRHTGLLAVPQTCQARPHLRTFPLSAPSARNPLPPDLRVARVLTSFRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDTIHQVGVYCLALVPANTLPKTPLGGIHISQTKQLFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQAAGRDLGQIEENDLVRKHQFLAEILQWRAQATPDHVLYVLLNAKGTTVCTASCLQLHKRAERIASVLGDKGHLNAGDNVVLLYPPGIELIAAFYGCLYAGCIPVTVRPPHAQNLTATLPTVRMVVDVSKAACVLTTQTLMRLLKSREAAAAVDVKTWPAIIDTDDLPRKRLPQLYKPPTPEMLAYLDFSVSTTGMLTGVKMSHSAVNALCRAIKLQCELYSSRQIAICLDPYCGLGFALWCLCSVYSGHQSVLIPPMELESNLSLWLATVNQYKIRDTFCSYSVMELCTKGLGSQVEALKTRGINLSCIRTCVVVAEERPRVTLQQSFSKLFKDIGLSPRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPVGDSHLGEIWVNSPHTASGYYTIYDSETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAATGERHDALYVVGALDETLELRGLRYHPIDIETSVSRVHRSIAECAVFTWTNLLVVVVELCGSEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVVPINSRGEKQRMHLRDSFLADQLDPIYVAYNM", "length": 1618 }, "evidence": [ { "id": "A0A5G2Q7V8", "url": "https://omabrowser.org/oma/group/A0A5G2Q7V8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q3UH60-1", "protein_name": "Disco-interacting protein 2 homolog B", "gene_name": "Dip2b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAERGLEPSPAAVAALPPEVRAQLAELELELSEGDITQKGYEKKRSKLLSPYSPQTQETDSIGQKERNQTPAPTAAQTSAPSKYHRSRSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAALQQSLQNAESWINRSIQGSSTSSSASSTLSHGEVKGTSGSLADVFANTRIENVSAPPDVTATTSSSSSSLRPANIDLPPSGIVKGMHKGSNRSSLMDTADGVPVNSRVSTKIQQLLNTLKRPKRPPLKEFFVDDSEEIVEGIPQPDPNQPKPEGRQMTPVKGEPLGVICNWPPALESALQRWGSTQAKCPCLTGLDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTSEICLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKPPKDWQPHISPAGTEPAYIEYKTSKEGSVMGVTVSRLAMLSQCQALSQACNYSEGETVVNVLDFKKDAGLWHGMFANVMNKMHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSAEAMTVAIRRPGVPGAPLPGRAILSMNGLSYGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGLPQLCRTDEIGEICVSSRTGGMMYFGLAGVTKNTFEVIPVTSSGSPVGDVPFIRSGLLGFVGPGSLVFVVGKMDGLLMVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQLFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQAAGRDLGQIEENDLVRKHQFLAEILQWRAQATPDHVLFMLLNAKGTTVCTASCLQLHKRAERIASVLGDKGHLNAGDNVVLLYPPGIELIAAFYGCLYAGCIPVTVRPPHAQNLTATLPTVRMVVDVSKAACVLTTQTLMRLLKSREAAAAVDVKTWPAIIDTDDLPRKRLPQLYKPPTPEMLAYLDFSVSTTGMLTGVKMSHSAVNALCRAIKLQCELYSSRQIAICLDPYCGLGFALWCLCSVYSGHQSVLIPPMELENNLFLWLATVNQYKIRDTFCSYSVMELCTKGLGNQVEVLKTRGINLSCIRTCVVVAEERPRVSLQQSFSKLFKDIGLSPRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPVGDSHLGEIWVNSPHTASGYYTIYDSETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAATGERHDALYVVGALDETLELRGLRYHPIDIETSVSRVHRSIAECAVFTWTNLLVVVVELCGSEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVVPINSRGEKQRMHLRDSFLADQLDPIYVAYNM", "length": 1574 }, "evidence": [ { "id": "A0A5G2Q7V8", "url": "https://omabrowser.org/oma/group/A0A5G2Q7V8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6NVJ5-1", "protein_name": "Disco-interacting protein 2 homolog B-A", "gene_name": "dip2ba", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MADRGVDLAALPKEVREQLAELELELSEGDITQKGYEKKRAKLLAPFVPQTQNVDVSILSTDSTSSPITIPIAAPRQHRAHRSGGTRDDRYRSDIHTEAVQAALARHKEEKMALPMPTKRRSAFVQSPAENCTPPDTSSASEDEGSLRRRQAAISAMLAQNLQSPEYWINRSVQGSSTSSSASSTLSHGDGKTHNHNNHSQGQTSALADVLAHTRIDTNSSSGSVPPDVTSTAPQDRNSRVDLPANIAVKGISRGQSRSSMMDTAGGVPAHSRVSTKIQQLLNTLKRPKRPPLSEFFLDDSEEIVEVPQPDPNTPRPEGRQIIPVKGEPLGVVSNWPPALQAALARWGATQAKSPALTALDITGKPLYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNSDPGMFWVAFYGCLLAEVIPVPIEVPLSRKDAGSQQIGFLLGSCGVGLALTSEVCLKGLPKTPNGEIMQFKGWPRLKWVVTDTKYLTKPSKDWQPHIPTANTDTAYIEYKASKEGTVMGVAVSKISMLTHCQALTQACNYCEGETLVNVLDFKKDSGLWHGVLTSVMNRIHTISVPYAVMKACPLSWVQRVHVHKARVALVKCRDLHWAMMAHRDQKDTNLSSLRMLIVADGANPWSVSSCDAFLNVFQSHGLKPEMICPCASSPEAMTVAIRRPGAPGTPLPARAILSMAGLSHGVIRVNTEDKNSALTVQDVGHVMPGALMCIVKPDGPPMLCKTDEIGEIVLNSRAGGTMYYGLPGVTKNTFEVIPVNSGGTPIGDVPFTRTGLLGFVGPGSLVFVVGKIEGLLSVSGRRHNADDLVATALAVEPVKTVYRGRIAVFSVTVFYDERVVIVAEQRPDANEEDSFQWMSRVLQAIDSIHQVGLYCLALVPANTLPKTPLGGIHVSETKHHFLEGSLHPCNILMCPHTCVTNLPKPRQKQPVGVGPASIMVGNLVAGKRIAQASGRDLGLIDDQEQSRKHQFLSEALQWRAQTDPDHVLYMLLNAKGVAVSTATCSQLHKRAEKITAALLERGGINTGDNVVLLYPPGIDLIASFYGCLYAGCIPVTVRPPHPQNLSATLPTVRMIIDVSKAACILTTQTLMKTLRSKEAAASVNVKTWPNIIDTDDLPRKRPASIYKPPTAEMLAYLDFSVSTTGMLTGVKMSHSAVNALCRSIKLQCELYSSRQIAICMDPYCGLGFVLWCLSSVYSGHQSILIPPMELETSLPLWLSTLSQYKIRDTFCSYSVMELCTKGLGTQTEALKARNVNLSCVRSCVVIAEERPRLALTQSFSKLFKDLGLSPRAVSTAFGSRVNLAICLQGTAGPDPSTVYVDMKSLRHDRVRLVERGAPQSLPLMESGTMLPGVRVIIVNPETKGPLGDSHLGEIWVNSPHNASGYYTIYGEESLQADHFNTRLSFGDTETLWARTGYLGFVKRTELLDASGDRHDALFVVGSLDETLELRGLRYHPIDIETSVSRAHRSIAESAVFTWTNLLVVVVELSGSEQEALDLVPLVTNVVLKEHHLIVGVVVIVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM", "length": 1577 }, "evidence": [ { "id": "A0A5G2Q7V8", "url": "https://omabrowser.org/oma/group/A0A5G2Q7V8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9P265-1", "protein_name": "Disco-interacting protein 2 homolog B", "gene_name": "DIP2B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAERGLEPSPAAVAALPPEVRAQLAELELELSEGDITQKGYEKKRSKLLSPYSPQTQETDSAVQKELRNQTPAPSAAQTSAPSKYHRTRSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAALQQSLQNAESWINRSIQGSSTSSSASSTLSHGEVKGTSGSLADVFANTRIENFSAPPDVTTTTSSSSSSSSIRPANIDLPPSGIVKGMHKGSNRSSLMDTADGVPVSSRVSTKIQQLLNTLKRPKRPPLKEFFVDDSEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVICNWPPALESALQRWGTTQAKCSCLTALDMTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTSEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKPPKDWQPHISPAGTEPAYIEYKTSKEGSVMGVTVSRLAMLSHCQALSQACNYSEGETIVNVLDFKKDAGLWHGMFANVMNKMHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSAEAMTVAIRRPGVPGAPLPGRAILSMNGLSYGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGPPQLCKTDEIGEICVSSRTGGMMYFGLAGVTKNTFEVIPVNSAGSPVGDVPFIRSGLLGFVGPGSLVFVVGKMDGLLMVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQLFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQAAGRDLGQIEENDLVRKHQFLAEILQWRAQATPDHVLFMLLNAKGTTVCTASCLQLHKRAERIASVLGDKGHLNAGDNVVLLYPPGIELIAAFYGCLYAGCIPVTVRPPHAQNLTATLPTVRMIVDVSKAACILTSQTLMRLLRSREAAAAVDVKTWPTIIDTDDLPRKRLPQLYKPPTPEMLAYLDFSVSTTGMLTGVKMSHSAVNALCRAIKLQCELYSSRQIAICLDPYCGLGFALWCLCSVYSGHQSVLIPPMELENNLFLWLSTVNQYKIRDTFCSYSVMELCTKGLGNQVEVLKTRGINLSCVRTCVVVAEERPRVALQQSFSKLFKDIGLSPRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPVGDSHLGEIWVNSPHTASGYYTIYDSETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAATGERHDALYVVGALDETLELRGLRYHPIDIETSVSRIHRSIAECAVFTWTNLLVVVVELCGSEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM", "length": 1576 }, "evidence": [ { "id": "A0A5G2Q7V8", "url": "https://omabrowser.org/oma/group/A0A5G2Q7V8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "nervous system development", "id": "GO:0007399", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007399", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q7V8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7V8" } ], "pmid": "" }, { "name": "negative regulation of axon extension", "id": "GO:0030517", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030517", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q7V8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7V8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "neuron projection", "id": "GO:0043005", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043005", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q7V8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7V8" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q7V8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7V8" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q7V8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7V8" } ], "pmid": "" }, { "name": "axon", "id": "GO:0030424", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030424", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q7V8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7V8" } ], "pmid": "" }, { "name": "dendrite", "id": "GO:0030425", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030425", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q7V8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7V8" } ], "pmid": "" }, { "name": "perikaryon", "id": "GO:0043204", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043204", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q7V8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7V8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "alpha-tubulin binding", "id": "GO:0043014", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043014", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q7V8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7V8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1082, "end_pos": 1084, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1274, "end_pos": 1276, "annotation": "n_glycosylation_sequon" }, { "start_pos": 176, "end_pos": 178, "annotation": "n_glycosylation_sequon" }, { "start_pos": 215, "end_pos": 217, "annotation": "n_glycosylation_sequon" }, { "start_pos": 256, "end_pos": 258, "annotation": "n_glycosylation_sequon" }, { "start_pos": 548, "end_pos": 550, "annotation": "n_glycosylation_sequon" }, { "start_pos": 69, "end_pos": 71, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2Q7V8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7V8" }, { "id": "PS51912", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51912" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DMAP1-binding", "eco_id": "ECO_0000259", "start_pos": 12, "end_pos": 131, "start_aa": "Ala", "end_aa": "Phe", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1082, "end_pos": 1084 }, { "start_pos": 1274, "end_pos": 1276 }, { "start_pos": 176, "end_pos": 178 }, { "start_pos": 215, "end_pos": 217 }, { "start_pos": 256, "end_pos": 258 }, { "start_pos": 548, "end_pos": 550 }, { "start_pos": 69, "end_pos": 71 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1W5E4-1", "uniprot_ac": "A0A4X1W5E4", "uniprot_id": "A0A4X1W5E4_PIG", "mass": { "chemical_mass": 24527.0, "monoisotopic_mass": 24527.0 }, "refseq": { "ac": "XP_001926942", "name": "26S proteasome non-ATPase regulatory subunit 10 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001926942" }, "gene_names": [ { "name": "PSMD10", "type": "recommended", "evidence": [ { "id": "A0A4X1W5E4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5E4" } ] }, { "name": "PSMD10", "type": "synonym", "evidence": [ { "id": "XP_001926942", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001926942" } ] } ], "protein_names": [ { "name": "26S proteasome non-ATPase regulatory subunit 10", "type": "recommended", "evidence": [ { "id": "A0A4X1W5E4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5E4/entry#names_and_taxonomy" } ] }, { "name": "26S proteasome non-ATPase regulatory subunit 10 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_001926942", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001926942" } ] }, { "name": "26S proteasome regulatory subunit p28", "type": "synonym", "evidence": [ { "id": "A0A4X1W5E4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5E4/entry#names_and_taxonomy" } ] }, { "name": "Gankyrin", "type": "synonym", "evidence": [ { "id": "A0A4X1W5E4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5E4/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Acts as a chaperone during the assembly of the 26S proteasome, specifically of the PA700/19S regulatory complex (RC). In the initial step of the base subcomplex assembly is part of an intermediate PSMD10:PSMC4:PSMC5:PAAF1 module which probably assembles with a PSMD5:PSMC2:PSMC1:PSMD2 module. Independently of the proteasome, regulates EGF-induced AKT activation through inhibition of the RHOA/ROCK/PTEN pathway, leading to prolonged AKT activation. Plays an important role in RAS-induced tumorigenesis.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W5E4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5E4#function" }, { "database": "UniProtKB", "id": "ARBA00059111", "url": "https://www.uniprot.org/uniprotkb/ARBA00059111#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W5E4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5E4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PSMD10", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5E4", "locus": { "chromosome": "X", "start_pos": 88540376, "end_pos": 88548560, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000033180", "url": "https://www.ensembl.org/id/ENSSSCG00000033180" } ] } } ], "crossref": [ { "id": "A0A4X1W5E4", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1W5E4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000033180", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000033180", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100156308", "url": "https://www.ncbi.nlm.nih.gov/gene/100156308", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036770", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036770", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051637", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051637", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100156308", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156308", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WAVAYNR", "url": "https://omabrowser.org/oma/group/WAVAYNR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1W5E4", "url": "https://www.orthodb.org/?gene=A0A4X1W5E4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24171", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24171", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24171:SF11", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24171:SF11", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24180", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24180", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24180:SF45", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24180:SF45", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00023", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00023", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12796", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-9907900", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9907900", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_001926942", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001926942", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287ACY7", "url": "https://www.uniprot.org/uniprotkb/A0A287ACY7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ACY7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ACY7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W499", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W499", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W499-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W499-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W5E4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5E4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W5E4-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5E4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEGCVSNLMVCNLAYSGKLEELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAKGGLGLILKRMVES", "length": 226, "header": "tr|A0A4X1W5E4-1|A0A4X1W5E4_PIG Isoform 1 of 26S proteasome non-ATPase regulatory subunit 10 OS=Sus scrofa OX=9823 GN=PSMD10 PE=1 SV=1 CANONICAL=A0A4X1W5E4-1" }, "isoforms": [ { "isoform_ac": "A0A287ACY7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ACY7/entry", "sequence": { "sequence": "MEGCVSNLMVCNLAYSGKLEELKERILADKSLATRTDQVKQRWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAKGGLGLILKRMVES", "length": 195, "header": "tr|A0A287ACY7-1|A0A4X1W5E4_PIG Computationally mapped isoform of 26S proteasome non-ATPase regulatory subunit 10 OS=Sus scrofa OX=9823 GN=PSMD10 PE=1 SV=2 CANONICAL=A0A4X1W5E4-1" }, "locus": { "chromosome": "X", "start_pos": 88548521, "end_pos": 88541174, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051316.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051316.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041864.2", "url": "https://www.ensembl.org/id/ENSSSCP00000041864.2" } ] } }, { "isoform_ac": "A0A4X1W499-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W499/entry", "sequence": { "sequence": "MEGCVSNLMVCNLAYSGKLEELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAKGGLGLILKRMVES", "length": 185, "header": "tr|A0A4X1W499-1|A0A4X1W5E4_PIG Computationally mapped isoform of 26S proteasome non-ATPase regulatory subunit 10 OS=Sus scrofa OX=9823 GN=PSMD10 PE=1 SV=1 CANONICAL=A0A4X1W5E4-1" }, "locus": { "chromosome": "X", "start_pos": 88548521, "end_pos": 88541174, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090704.1", "url": "https://www.ensembl.org/id/ENSSSCT00000090704.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062688.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062688.1" } ] } }, { "isoform_ac": "A0A4X1W5E4-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5E4/entry", "sequence": { "sequence": "MEGCVSNLMVCNLAYSGKLEELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAKGGLGLILKRMVES", "length": 226, "header": "tr|A0A4X1W5E4-1|A0A4X1W5E4_PIG Isoform 1 of 26S proteasome non-ATPase regulatory subunit 10 OS=Sus scrofa OX=9823 GN=PSMD10 PE=1 SV=1 CANONICAL=A0A4X1W5E4-1" }, "locus": { "chromosome": "X", "start_pos": 88548521, "end_pos": 88541174, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058491.2", "url": "https://www.ensembl.org/id/ENSSSCT00000058491.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059620.1", "url": "https://www.ensembl.org/id/ENSSSCP00000059620.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W499", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W499" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100156308", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156308", "resource": "KEGG Pathway" }, { "id": "R-SSC-9907900", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9907900", "resource": "Reactome", "description": "Proteasome assembly" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A061HY35-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 10", "gene_name": "Psmd10", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEGCVSNLMVCNLAYTGKLDELKESILADRTLATRTDQDNRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKLLVTQGASIYIENKEEKTPLQVAKGGLGLILKRIVES", "length": 226 }, "evidence": [ { "id": "A0A4X1W5E4", "url": "https://omabrowser.org/oma/group/A0A4X1W5E4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A3S5ZP61-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 10", "gene_name": "PSMD10", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGKAKEEERMVIGGALRALLISARSLRSEEVVDLAAPRSWESEMEGCVSNLMICNLAYSGKLEELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAKGGLGLILKRMVES", "length": 269 }, "evidence": [ { "id": "A0A4X1W5E4", "url": "https://omabrowser.org/oma/group/A0A4X1W5E4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F1P1R3-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 10", "gene_name": "PSMD10", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEGAVSNVEVCNLAYAGRLEELRAQLLRDRALATATDQDSRTALHWACSAGHAAVADLLLGLGVPVGDKDDAGWTPLHIAASAGRDEIVKALIDKGAPINAVNQNGCTPLHYAASKNKQEIAIMLLENGADPDATDHFESTPLHRAAAKGNLKMIQILLRHNASVNIQDSEGNTPLHLACDEERVDEAKLLVSHGASIHTENKEELTPLKVAKGGLGAILKRMVEG", "length": 226 }, "evidence": [ { "id": "A0A4X1W5E4", "url": "https://omabrowser.org/oma/group/A0A4X1W5E4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "O75832-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 10", "gene_name": "PSMD10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEGCVSNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAKGGLGLILKRMVEG", "length": 226 }, "evidence": [ { "id": "A0A4X1W5E4", "url": "https://omabrowser.org/oma/group/A0A4X1W5E4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P50086-1", "protein_name": "Probable 26S proteasome regulatory subunit p28", "gene_name": "NAS6", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQVKKFFLNNV", "length": 228 }, "evidence": [ { "id": "A0A4X1W5E4", "url": "https://omabrowser.org/oma/group/A0A4X1W5E4/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q54HW1-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 10", "gene_name": "psmD10", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSGTKFRTGGTKEDDLLEFVKVGKLLEVKDLIENQGVKADCKDEDERTPLHWAAAKGQISVAQYLMDNCKCSPNTNDDGGWTPLTSATSAGHTHMVKLLLEFGADPNTVNDSKRTPLHYASSKGRSDIVDLLLTHGAKNRKDDTGSAPIHRASSNGSVATVERLLKGEANINSTNNEGDTPLHIAAEYNHEDVVECLLKHGADTTIENKDSKTPIDMSSSQTIKYLIKEFKK", "length": 232 }, "evidence": [ { "id": "A0A4X1W5E4", "url": "https://omabrowser.org/oma/group/A0A4X1W5E4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9Z2X2-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 10", "gene_name": "Psmd10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEGCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAESEEASM", "length": 231 }, "evidence": [ { "id": "A0A4X1W5E4", "url": "https://omabrowser.org/oma/group/A0A4X1W5E4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Z2X3-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 10", "gene_name": "Psmd10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEGCVSNLMVCNLAYNGKLDELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNEKDDAGWSPLHIAASAGRDEIVKALLIKGAQVNAVNQNGCTALHYAASKNRHEIAVMLLEGGANPDAKNHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKLLVTQGASIYIENKEEKTPLQVAKGGLGLILKRIAESEEASM", "length": 231 }, "evidence": [ { "id": "A0A4X1W5E4", "url": "https://omabrowser.org/oma/group/A0A4X1W5E4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "proteasome regulatory particle, base subcomplex", "id": "GO:0008540", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008540", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W5E4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5E4" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W5E4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5E4" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W5E4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5E4" } ], "pmid": "" }, { "name": "cytoskeleton", "id": "GO:0005856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005856", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W5E4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5E4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 10, "go_terms": [ { "name": "negative regulation of transcription by RNA polymerase II", "id": "GO:0000122", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000122", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W5E4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5E4" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W5E4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5E4" } ], "pmid": "" }, { "name": "positive regulation of cell growth", "id": "GO:0030307", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030307", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W5E4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5E4" } ], "pmid": "" }, { "name": "apoptotic process", "id": "GO:0006915", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006915", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W5E4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5E4" } ], "pmid": "" }, { "name": "positive regulation of protein ubiquitination", "id": "GO:0031398", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031398", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W5E4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5E4" } ], "pmid": "" }, { "name": "positive regulation of proteasomal ubiquitin-dependent protein catabolic process", "id": "GO:0032436", "url": 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"MFPAVSSPRTPGPGARRGPLGGVGPGSTPRATSRKGLALGSAVSSPVLFSPVGRRSSVSSRGTPTRIFPHHSITESVNYDVKTFGSSLPVKIMEALTLAEVDDHLTVHIDEGGWACLVCREKLIIWKIALSPISKLSVCKELQLPPSDFHWSADLVALSYSAASGESHSTQAVAVMVATREGSIRYWPSLASEDTYTETTVDSGGDKTYSFLTAVQGGSFILSSSGGQQIRLIPESLGKIHQHILPQGQGVLSGIGRKVSSLLGILSPSSDLLLSSVLWDRERSSFYSLTSSNISKWELDDSSEKQVHSWDINRVLKENIIDAIWGSESNYEAIKEGVNIRYLDLRQNCDGLLILAAAWHLADNPCLVYYSLIAVEDNGYQMSDAVTVEVTQYNPPFQSEDLITCRLMVPDFSNQTAYLYSENSVYVCSTGTGKFSLPREKIVFNTQGDSILGAGSCGGVPILFSRNSGLVSITSRENVSILAEDLEESLASSIAGPGNEPSGGPSVVFETSTKNETIAHEDKTKLLKAAFLQYCRKDLGHAQMIVDELFSSHSDLDSDHELDRAVTQISVDLVDDYPASDPRWAESVPEEAPGFSNTSLIILHQLEDKMKAHSFLMDFIHQVGLFGRLGTSPVRGLPMATRLLLCEHAEKLSAAIVLKNHHSRLSDLVNTAILIALNKRDREIPPNLTPADVFFREVSQVDTICECLLEHEEQVLKDTSLESVEWAEVVINVNSILKDMLQAASHYRQNRSSLYRREPLEKEPEYIPWTATSGPAGIRTAIVRQHGIILKVVYPQADSSLRNMVTEQLVALIDCFLDGYVAQLKSVDKSSDQERYDSLEMEYLQKRSDLLSPLLTLGQYPWAASLAEKYCDFDILVQMCEQTDNQTRLQRYMTQFADQNFSDFLFRWYLEKGKRGKLLSQPVSQHGQLASFLQAHEHLSWLHEINSHELEKAHATLLGLANMETRYFAKKKTLLGLSKLAALASDFSEDILQEKIEEMAEQERFLLHQETLPEQLLAEKQLSLSAMPVLTASQLIGLYICEENRRANDYDFKKALDLLEYIDEEEDVNINDLKLEILCKALQRDNWSSSDGKDDPIEVSKDSIFVKILQKLLKDGIQLSEYLPEVKDLLQADQLGSLKSNPYFEFVLKANYEYYVQGQM", "length": 1160, "header": "tr|A0A287AEM6-1|A0A5G2QBV2_PIG Computationally mapped isoform of Nuclear pore complex protein Nup133 OS=Sus scrofa OX=9823 GN=NUP133 PE=1 SV=1 CANONICAL=A0A5G2QBV2-1" }, "locus": { "chromosome": "14", "start_pos": 60404356, "end_pos": 60353554, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044258.2", "url": "https://www.ensembl.org/id/ENSSSCT00000044258.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000042477.1", "url": "https://www.ensembl.org/id/ENSSSCP00000042477.1" } ] } }, { "isoform_ac": "A0A287B1V8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B1V8/entry", "sequence": { "sequence": "MFPAVSSPRTPGPGARRGPLGGVGPGSTPRATSRKGLALGSAVSSPVLFSPVGRRSSVSSRGTPTRIFPHHSITESVNYDVKTFGSSLPVKIMEALTLAEVDDHLTVHIDEGGWACLVCREKLIIWKIALSPISKLSVCKELQLPPSDFHWSADLVALSYSAASGESHSTQAVAVMVATREGSIRYWPSLASEDTYTETTVDSGGDKTYSFLTAVQGGSFILSSSGGQQIRLIPESLGKIHQHILPQGQGVLSGIGRKVSSLLGILSPSSDLLLSSVLWDRERSSFYSLTSSNISKWELDDSSEKQVHSWDINRVLKENIIDAIWGSESNYEAIKEGVNIRYLDLRQNCDGLLILAAAWHLADNPCLVYYSLIAVEDNGYQMSDAVTVEVTQYNPPFQSVVFETSTKNETIAHEDKTKLLKAAFLQYCRKDLGHAQMIVDELFSSHSDLDSDHELDRAVTQISVDLVDDYPASDPQCYMCKSCYCVSTEAPGFSNTSLIILHQLEDKMKAHSFLMDFIHQVGLFGRLGTSPVRGLPMATRLLLCEHAEKLSAAIVLKNHHSRLSDLVNTAILIALNKRDREIPPNLTPADVFFREVSQVDTICECLLEHEEQVLKDTSLESVEWAEVVINVNSILKDMLQAASHYRQNRSSLYRREPLEKEPEYIPWTATSGPAGIRTAIVRQHGIILKVVYPQADSSLRNMVTEQLVALIDCFLDGYVAQLKSVDKSSDQERYDSLEMEYLQKRSDLLSPLLTLGQYPWAASLAEKYCDFDILVQMCEQTDNQTRLQRYMTQFADQNFSDFLFRWYLEKGKRGKLLSQPVSQHGQLASFLQAHEHLSWLHEINSHELEKAHATLLGLANMETRYFAKKKTLLGLSKLAALASDFSEDILQEKIEEMAEQERFLLHQETLPEQLLAEKQLSLSAMPVLTASQLIGLYICEENRRANDYDFKKALDLLEYIDEEEDVNINDLKLEILCKALQRDNWSSSDGKDDPIEVSKDSIFVKILQKLLKDGIQLSEYLPEVKDLLQADQLGSLKSNPYFEFVLKANYEYYVQGQM", "length": 1058, "header": "tr|A0A287B1V8-1|A0A5G2QBV2_PIG Computationally mapped isoform of Nuclear pore complex protein Nup133 OS=Sus scrofa OX=9823 GN=NUP133 PE=1 SV=3 CANONICAL=A0A5G2QBV2-1" }, "locus": { "chromosome": "14", "start_pos": 60404356, "end_pos": 60353554, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063443.3", "url": "https://www.ensembl.org/id/ENSSSCT00000063443.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050151.3", "url": "https://www.ensembl.org/id/ENSSSCP00000050151.3" } ] } }, { "isoform_ac": "A0A4X1U591-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1U591/entry", "sequence": { "sequence": "MFPAVSSPRTPGPGARRGPLGGVGPGSTPRATSRKGLALGSAVSSPVLFSPVGRRSSVSSRGTPTRIFPHHSITESVNYDVKTFGSSLPVKIMEALTLAEVDDHLTVHIDEGGWACLVCREKLIIWKIALSPISKLSVCKELQLPPSDFHWSADLVALSYSAASGESHSTQAVAVMVATREGSIRYWPSLASEDTYTETTVDSGGDKTYSFLTAVQGGSFILSSSGGQQIRLIPESLGKIHQHILPQGQGVLSGIGRKVSSLLGILSPSSDLLLSSVLWDRERSSFYSLTSSNISKWELDDSSEKQVHSWDINRVLKENIIDAIWGSESNYEAIKEGVNIRYLDLRQNCDGLLILAAAWHLADNPCLVYYSLIAVEDNGYQMSDAVTVEVTQYNPPFQSEDLITCRLMVPDFSNQTAYLYSENSVYVCSTGTGKFSLPREKIVFNTQGDSILGAGSCGGVPILFSRNSGLVSITSRENVSILAEDLEESLASSIAGPGNESVVFETSTKNETIAHEDKTKLLKAAFLQYCRKDLGHAQMIVDELFSSHSDLDSDHELDRAVTQISVDLVDDYPASDPRWAESVPEEAPGFSNTSLIILHQLEDKMKAHSFLMDFIHQVGLFGRLGTSPVRGLPMATRLLLCEHAEKLSAAIVLKNHHSRLSDLVNTAILIALNKRDREIPPNLTPADVFFREVSQVDTICECLLEHEEQVLKDTSLESVEWAEVVINVNSILKDMLQAASHYRQNRSSLYRREPLEKEPEYIPWTATSGPAGIRTAIVRQHGIILKVVYPQADSSLRNMVTEQLVALIDCFLDGYVAQLKSVDKSSDQERYDSLEMEYLQKRSDLLSPLLTLGQYPWAASLAEKYCDFDILVQMCEQTDNQTRLQRYMTQFADQNFSDFLFRWYLEKGKRGKLLSQPVSQHGQLASFLQAHEHLSWLHEINSHELEKAHATLLGLANMETRYFAKKKTLLGLSKLAALASDFSEDILQEKIEEMAEQERFLLHQETLPEQLLAEKQLSLSAMPVLTASQLIGLYICEENRRANDYDFKKALDLLEYIDEEEDVNINDLKLEILCKALQRDKHSAQ", "length": 1085, "header": "tr|A0A4X1U591-1|A0A4X1U591_PIG Computationally mapped isoform of Nucleoporin 133 OS=Sus scrofa OX=9823 GN=NUP133 PE=1 SV=1 CANONICAL=A0A5G2QBV2-1" }, "locus": { "chromosome": "14", "start_pos": 60404235, "end_pos": 60353554, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055091.2", "url": "https://www.ensembl.org/id/ENSSSCT00000055091.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037809.1", "url": "https://www.ensembl.org/id/ENSSSCP00000037809.1" } ] } }, { "isoform_ac": "A0A5G2QBV2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBV2/entry", "sequence": { "sequence": "MFPAVSSPRTPGPGARRGPLGGVGPGSTPRATSRKGLALGSAVSSPVLFSPVGRRSSVSSRGTPTRIFPHHSITESVNYDVKTFGSSLPVKIMEALTLAEVDDHLTVHIDEGGWACLVCREKLIIWKIALSPISKLSVCKELQLPPSDFHWSADLVALSYSAASGESHSTQAVAVMVATREGSIRYWPSLASEDTYTETTVDSGGDKTYSFLTAVQGGSFILSSSGGQQIRLIPESLGKIHQHILPQGQGVLSGIGRKVSSLLGILSPSSDLLLSSVLWDRERSSFYSLTSSNISKWELDDSSEKQVHSWDINRVLKENIIDAIWGSESNYEAIKEGVNIRYLDLRQNCDGLLILAAAWHLADNPCLVYYSLIAVEDNGYQMSDAVTVEVTQYNPPFQSEDLITCRLMVPDFSNQTAYLYSENSVYVCSTGTGKFSLPREKIVFNTQGDSILGAGSCGGVPILFSRNSGLVSITSRENVSILAEDLEESLASSIAGPGNEFTVLQSVVFETSTKNETIAHEDKTKLLKAAFLQYCRKDLGHAQMIVDELFSSHSDLDSDHELDRAVTQISVDLVDDYPASDPLGFVSASCYCVSTEAPGFSNTSLIILHQLEDKMKAHSFLMDFIHQVGLFGRLGTSPVRGLPMATRLLLCEHAEKLSAAIVLKNHHSRLSDLVNTAILIALNKRDREIPPNLTPADVFFREVSQVDTICECLLEHEEQVLKDTSLESVEWAEVVINVNSILKDMLQAASHYRQNRSSLYRREPLEKEPEYIPWTATSGPAGIRTAIVRQHGIILKVVYPQADSSLRNMVTEQLVALIDCFLDGYVAQLKSVDKSSDQERYDSLEMEYLQKRSDLLSPLLTLGQYPWAASLAEKYCDFDILVQMCEQTDNQTRLQRYMTQFADQNFSDFLFRWYLEKGKRGKLLSQPVSQHGQLASFLQAHEHLSWLHEINSHELEKAHATLLGLANMETRYFAKKKTLLGLSKLAALASDFSEDILQEKIEEMAEQERFLLHQETLPEQLLAEKQLSLSAMPVLTASQLIGLYICEENRRANDYDFKKALDLLEYIDEEEDVNINDLKLEILCKALQRDNWSSSDGKDDPIEVSKDSIFVKILQKLLKDGIQLSEYLPEVKDLLQADQLGSLKSNPYFEFVLKANYEYYVQGQM", "length": 1165, "header": "tr|A0A5G2QBV2-1|A0A5G2QBV2_PIG Isoform 1 of Nuclear pore complex protein Nup133 OS=Sus scrofa OX=9823 GN=NUP133 PE=1 SV=2 CANONICAL=A0A5G2QBV2-1" }, "locus": { "chromosome": "14", "start_pos": 60404356, "end_pos": 60353554, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077537.2", "url": "https://www.ensembl.org/id/ENSSSCT00000077537.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060993.2", "url": "https://www.ensembl.org/id/ENSSSCP00000060993.2" } ] } }, { "isoform_ac": "A0A8D0ZW03-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0ZW03/entry", "sequence": { "sequence": "MFPAVSSPRTPGPGARRGPLGGVGPGSTPRATSRKGLALGSAVSSPVLFSPVGRRSSVSSRGTPTRIFPHHSITESVNYDVKTFGSSLPVKIMEALTLAEVDDHLTVHIDEGGWACLVCREKLIIWKIALSPISKAVAVMVATREGSIRYWPSLASEDTYTETTVDSGGDKTYSFLTAVQGGSFILSSSGGQQIRLIPESLGKIHQHILPQGQGVLSGIGRKVSSLLGILSPSSDLLLSSVLWDRERSSFYSLTSSNISKWELDDSSEKQVHSWDINRVLKENIIDAIWGSESNYEAIKEGVNIRYLDLRQNCDGLLILAAAWHLADNPCLVYYSLIAVEDNGYQMSDAVTVEVTQYNPPFQSEDLITCRLMVPDFSNQTAYLYSENSVYVCSTGTGKFSLPREKIVFNTQGDSILGAGSCGGVPILFSRNSGLVSITSRENVSILAEDLEESLASSIAGPGNESVVFETSTKNETIAHEDKTKLLKAAFLQYCRKDLGHAQMIVDELFSSHSDLDSDHELDRAVTQISVDLVDDYPASDPRWAESVPEEAPGFSNTSLIILHQLEDKMKAHSFLMDFIHQVGLFGRLGTSPVRGLPMATRLLLCEHAEKLSAAIVLKNHHSRLSDLVNTAILIALNKRDREIPPNLTPADVFFREVSQVDTICECLLEHEEQVLKDTSLESVEWAEVVINVNSILKDMLQAASHYRQNRSSLYRREPLEKEPEYIPWTATSGPAGIRTAIVRQHGIILKVVYPQADSSLRNMVTEQLVALIDCFLDGYVAQLKSVDKSSDQERYDSLEMEYLQKRSDLLSPLLTLGQYPWAASLAEKYCDFDILVQMCEQTDNQTRLQRYMTQFADQNFSDFLFRWYLEKGKRGKLLSQPVSQHGQLASFLQAHEHLSWLHEINSHELEKAHATLLGLANMETRYFAKKKTLLGLSKLAALASDFSEDILQEKIEEMAEQERFLLHQETLPEQLLAEKQLSLSAMPVLTASQLIGLYICEENRRANDYDFKKALDLLEYIDEEEDVNINDLKLEILCKALQRDNWSSSDGKDDPIEVSKDSIFVKILQKLLKDGIQLSEYLPEVKDLLQADQLGSLKSNPYFEFVLKANYEYYVQGQM", "length": 1119, "header": "tr|A0A8D0ZW03-1|A0A5G2QBV2_PIG Computationally mapped isoform of Nuclear pore complex protein Nup133 OS=Sus scrofa OX=9823 GN=NUP133 PE=1 SV=1 CANONICAL=A0A5G2QBV2-1" }, "locus": { "chromosome": "14", "start_pos": 60404356, "end_pos": 60353554, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089589.2", "url": "https://www.ensembl.org/id/ENSSSCT00000089589.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066518.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066518.1" } ] } }, { "isoform_ac": "A0A8D1GUG1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1GUG1/entry", "sequence": { "sequence": "MFPAVSSPRTPGPGARRGPLGGVGPGSTPRATSRKGLALGSAVSSPVLFSPVGRRSSVSSRGTPTRIFPHHSITESVNYDVKTFGSSLPVKIMEALTLAEVDDHLTVHIDEGGWACLVCREKLIIWKIALSPISKLSVCKELQLPPSDFHWSADLVALSYSAASGESHSTQAVAVMVATREGSIRYWPSLASEDTYTETTVDSGGDKTYSFLTAVQGGSFILSSSGGQQIRLIPESLGKIHQHILPQGQGVLSGIGRKVSSLLGILSPSSDLLLSSVLWDRERSSFYSLTSSNISKWELDDSSEKQVHSWDINRVLKENIIDAIWGSESNYEAIKEGVNIRYLDLRQNCDGLLILAAAWHLADNPCLVYYSLIAVEDNGYQMSDAVTVEVTQYNPPFQSEDLITCRLMVPDFSNQTAYLYSENSVYVCSTGTGKFSLPREKIVFNTQGDSILGAGSCGGVPILFSRNSGLVSITSRENVSILAEDLEESLASSIAGPGNEFTVLQSVVFETSTKNETIAHEDKTKLLKAAFLQYCRKDLGHAQMIVDELFSSHSDLDSDHELDRAVTQISVDLVDDYPASDPRWAESVPEEAPGFSNTSLIILHQLEDKMKAHSFLMDFIHQVGLFGRLGTSPVRGLPMATRLLLCEHAEKLSAAIVLKNHHSRLSDLVNTAILIALNKRDREIPPNLTPADVFFREVSQVDTICECLLEHEEQVLKDTSLESVEWAEVVINVNSILKDMLQAASHYRQNRSSLYRREPLEKEPEYIPWTATSGPAGIRTAIVRQHGIILKVVYPQADSSLRNMVTEQLVALIDCFLDGYVAQLKSVDKSSDQERYDSLEMEYLQKRSDLLSPLLTLGQYPWAASLAEKYCDFDILVQMCEQTDNQTRLQRYMTQFADQNFSDFLFRWYLEKGKRGKLLSQPVSQHGQLASFLQAHEHLSWLHEINSHELEKAHATLLGLANMETRYFAKKKTLLGLSKLAALASDFSEDILQEKIEEMAEQERFLLHQETLPEQLLAEKQLSLSAMPVLTASQLIGLYICEENRRANDYDFKKALDLLEYIDEEEDVNINDLKLEILCKALQRDNWSSSDGKDDPIEVSKDSIFVKILQKLLKDGIQLSEYLPEVKDLLQADQLGSLKSNPYFEFVLKANYEYYVQGQM", "length": 1160, "header": "tr|A0A8D1GUG1-1|A0A5G2QBV2_PIG Computationally mapped isoform of Nuclear pore complex protein Nup133 OS=Sus scrofa OX=9823 GN=NUP133 PE=1 SV=1 CANONICAL=A0A5G2QBV2-1" }, "locus": { "chromosome": "14", "start_pos": 60404356, "end_pos": 60353554, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060983.2", "url": "https://www.ensembl.org/id/ENSSSCT00000060983.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043491.2", "url": "https://www.ensembl.org/id/ENSSSCP00000043491.2" } ] } }, { "isoform_ac": "A0A8W4FDU9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDU9/entry", "sequence": { "sequence": "MFPAVSSPRTPGPGARRGPLGGVGPGSTPRATSRKGLALGSAVSSPVLFSPVGRRSSVSSRGTPTRIFPHHSITESVNYDVKTFGSSLPVKIMEALTLAELSVCKELQLPPSDFHWSADLVALSYSAASGESHSTQAVAVMVATREGSIRYWPSLASEDTYTETTVDSGGDKTYSFLTAVQGGSFILSSSGGQQIRLIPESLGKIHQHILPQGQGVLSGIGRKVSSLLGILSPSSDLLLSSVLWDRERSSFYSLTSSNISKWELDDSSEKQVHSWDINRVLKENIIDAIWGSESNYEAIKEGVNIRYLDLRQNCDGLLILAAAWHLADNPCLVYYSLIAVEDNGYQMSDAVTVEVTQYNPPFQSEDLITCRLMVPDFSNQTAYLYSENSVYVCSTGTGKFSLPREKIVFNTQGDSILGAGSCGGVPILFSRNSGLVSITSRENVSILAEDLEESLASSIAGPGNESVVFETSTKNETIAHEDKTKLLKAAFLQYCAPGFSNTSLIILHQLEDKMKAHSFLMDFIHQVGLFGRLGTSPVRGLPMATRLLLCEHAEKLSAAIVLKNHHSRLSDLVNTAILIALNKRDREIPPNLTPADVFFREVSQVDTICECLLEHEEQVLKDTSLESVEWAEVVINVNSILKDMLQAASHYRQNRSSLYRREPLEKEPEYIPWTATSGPAGIRTAIVRQHGIILKVVYPQADSSLRNMVTEQLVALIDCFLDGYVAQLKSVDKSSDQERYDSLEMEYLQKRSDLLSPLLTLGQYPWAASLAEKYCDFDILVQMCEQTDNQTRLQRYMTQFADQNFSDFLFRWYLEKGKRGKLLSQPVSQHGQLASFLQAHEHLSWLHEINSHELEKAHATLLGLANMETRYFAKKKTLLGLSKLAALASDFSEDILQEKIEEMAEQERFLLHQETLPEQLLAEKQLSLSAMPVLTASQLIGLYICEENRRANDYDFKKALDLLEYIDEEEDVNINDLKLEILCKALQRDNWSSSDGKDDPIEVSKDSIFVKILQKLLKDGIQLSEYLPEVKDLLQADQLGSLKSNPYFEFVLKANYEYYVQGQM", "length": 1064, "header": "tr|A0A8W4FDU9-1|A0A5G2QBV2_PIG Computationally mapped isoform of Nuclear pore complex protein Nup133 OS=Sus scrofa OX=9823 GN=NUP133 PE=1 SV=1 CANONICAL=A0A5G2QBV2-1" }, "locus": { "chromosome": "14", "start_pos": 60404356, "end_pos": 60353554, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000106368.1", "url": "https://www.ensembl.org/id/ENSSSCT00000106368.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077436.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077436.1" } ] } }, { "isoform_ac": "A0A8W4FN93-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FN93/entry", "sequence": { "sequence": "MFPAVSSPRTPGPGARRGPLGGVGPGSTPRATSRKGLALGSAVSSPVLFSPVGRRSSVSSRGTPTRIFPHHSITESVNYDVKTFGSSLPVKIMEALTLAEVDDHLTVHIDEGGWACLVCREKLIIWKIALSPISKLSVCKELQLPPSDFHWSADLVALSYSAASGESHSTQAVAVMVATREGSIRYWPSLASEDTYTETTVDSGGDKTYSFLTAVQGGSFILSSSGGQQIRLIPESLGKIHQHILPQGQGVLSGIGRKVSSLLGILSPSSDLLLSSVLWDRERSSFYSLTSSNISKWELDDSSEKQVHSWDINRVLKENIIDAIWGSESNYEAIKEGVNIRYLDLRQNCDGLLILAAAWHLADNPCLVYYSLIAVEDNGYQMSDAVTVEVTQYNPPFQVRYLTFTFNTFVFQFYFRKDLGHAQMIVDELFSSHSDLDSDHELDRAVTQISVDLVDDYPASDPRWAESSCYCVSTEAPGFSNTSLIILHQLEDKMKAHSFLMDFIHQVGLFGRLGTSPVRGLPMATRLLLCEHAEKLSAAIVLKNHHSRLSDLVNTAILIALNKRDREIPPNLTPADVFFREVSQVDTICECLLEHEEQVLKDTSLESVEWAEVVINVNSILKDMLQAASHYRQNRSSLYRREPLEKEPEYIPWTATSGPAGIRTAIVRQHGIILKVVYPQADSSLRNMVTEQLVALIDCFLDGYVAQLKSVDKSSDQERYDSLEMEYLQKRSDLLSPLLTLGQYPWAASLAEKYCDFDILVQMCEQTDNQTRLQRYMTQFADQNFSDFLFRWYLEKGKRGKLLSQPVSQHGQLASFLQAHEHLSWLHEINSHELEKAHATLLGLANMETRYFAKKKTLLGLSKLAALASDFSEDILQEKIEEMAEQERFLLHQETLPEQLLAEKQLSLSAMPVLTASQLIGLYICEENRRANDYDFKKALDLLEYIDEEEDVNINDLKLEILCKALQRDNWSSSDGKDDPIEVSKDSIFVKILQKLLKDGIQLSEYLPEVKDLLQADQLGSLKSNPYFEFVLKANYEYYVQGQM", "length": 1044, "header": "tr|A0A8W4FN93-1|A0A5G2QBV2_PIG Computationally mapped isoform of Nuclear pore complex protein Nup133 OS=Sus scrofa OX=9823 GN=NUP133 PE=1 SV=1 CANONICAL=A0A5G2QBV2-1" }, "locus": { "chromosome": "14", "start_pos": 60404356, "end_pos": 60353554, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000101161.1", "url": "https://www.ensembl.org/id/ENSSSCT00000101161.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080962.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080962.1" } ] } }, { "isoform_ac": "F1RG40-1", "url": "https://www.uniprot.org/uniprotkb/F1RG40/entry", "sequence": { "sequence": "MFPAVSSPRTPGPGARRGPLGGVGPGSTPRATSRKGLALGSAVSSPVLFSPVGRRSSVSSRGTPTRIFPHHSITESVNYDVKTFGSSLPVKIMEALTLAEVDDHLTVHIDEGGWACLVCREKLIIWKIALSPISKLSVCKELQLPPSDFHWSADLVALSYSAASGESHSTQAVAVMVATREGSIRYWPSLASEDTYTETTVDSGGDKTYSFLTAVQGGSFILSSSGGQQIRLIPESLGKIHQHILPQGQGVLSGIGRKVSSLLGILSPSSDLLLSSVLWDRERSSFYSLTSSNISKWELDDSSEKQVHSWDINRVLKENIIDAIWGSESNYEAIKEGVNIRYLDLRQNCDGLLILAAAWHLADNPCLVYYSLIAVEDNGYQMSDAVTVEVTQYNPPFQSEDLITCRLMVPDFSNQTAYLYSENSVYVCSTGTGKFSLPREKIVFNTQGDSILGAGSCGGVPILFSRNSGLVSITSRENVSILAEDLEESLASSIAGPGNESVVFETSTKNETIAHEDKTKLLKAAFLQYCRKDLGHAQMIVDELFSSHSDLDSDHELDRAVTQISVDLVDDYPASDPRWAESVPEEAPGFSNTSLIILHQLEDKMKAHSFLMDFIHQVGLFGRLGTSPVRGLPMATRLLLCEHAEKLSAAIVLKNHHSRLSDLVNTAILIALNKRDREIPPNLTPADVFFREVSQVDTICECLLEHEEQVLKDTSLESVEWAEVVINVNSILKDMLQAASHYRQNRSSLYRREPLEKEPEYIPWTATSGPAGIRTAIVRQHGIILKVVYPQADSSLRNMVTEQLVALIDCFLDGYVAQLKSVDKSSDQERYDSLEMEYLQKRSDLLSPLLTLGQYPWAASLAEKYCDFDILVQMCEQTDNQTRLQRYMTQFADQNFSDFLFRWYLEKGKRGKLLSQPVSQHGQLASFLQAHEHLSWLHEINSHELEKAHATLLGLANMETRYFAKKKTLLGLSKLAALASDFSEDILQEKIEVHLSHTWFELPLLHKRK", 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scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD22", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD22" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "VPS13C", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD22", "locus": { "chromosome": "1", "start_pos": 110104241, "end_pos": 109931264, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000036431", "url": "https://www.ensembl.org/id/ENSSSCG00000036431" } ] } } ], "crossref": [ { "id": "ENSSSCG00000036431", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000036431", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100625505", "url": "https://www.ncbi.nlm.nih.gov/gene/100625505", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR009543", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009543", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR026847", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026847", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR026854", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026854", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056747", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056747", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056748", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056748", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "SGWRPIR", "url": "https://omabrowser.org/oma/group/SGWRPIR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR16166", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16166", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16166:SF125", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16166:SF125", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12624", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12624", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25033", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25033", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25036", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25036", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25037", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25037", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020950024", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020950024", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AZG6", "url": "https://www.uniprot.org/uniprotkb/A0A287AZG6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AZG6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AZG6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BST0", "url": "https://www.uniprot.org/uniprotkb/A0A287BST0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BST0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BST0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QD22", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD22", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QD22-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD22-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVLESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENALSELDVPFKVKAGQIDKLTLKIPWKNLYGEAVVATLEGLYLLIVPGASIKYDAEKEEKSLQDSKQKELSRIEEALQKAAEKDKPKEAKKDTFLEKLATQVIKNVQVKITDIHIKYEDDVTDPKRPLSFGVTLGELSLLTANEHWTPCILNEAEKIIYKLIRLDSLSAYWNVNCSMSYQGTREQILDQLKSEILTSSSVPPNHQYIFQPISASAKLYMNPYAEAELKTPKLDWNIEVQNIAIELTKPQYLSMIDFLESVDYMVRNAPYRKYKPYLPLHNHGRQWWKYAIDSVLEVHIRRHTQMWSWSNIKKHRQLLKSYKSAYKNKLTQTKVPEEIQKQIQDLEKTLDVFNIILARQQAQVEVIRSGQKLRKKSAETGEKRGGWFSGFWGKKESKKKDEESLIPETIDDLMTPEEKDKLFTAIGYSESAHNLTLPKQYVAYIVALKLVSTSVTIRENKNVPEILKIQIIGLGTHVSQRPGAQALKVAAKLEHWYITGLRQQDIIPSLVASIGDTASSLLKIEFETNPENSTADQTLVVQSQPVEVVYDAKTINAVVEFFQSNKGLDLEQITSATLMKLEEIKERTATGLTHIIETRKVLDLRINLKPSYLIVPQTGFHHEKSDLLILDFGTFQLNSKDQGLQKTNNSSLEEIMDKAYDKFDVEIKNVQLLFARAEENWKKCRFQHPSTMHILQPMDIHVEVAKAMVEKDTRMARFKVSGGLPLMHVRISDQKMKDVLSLINSIPLPQKPSAQTPTPERQISTIPIISDRTKDLLGTPLLLDGVESESDDEYFDAEDGDTQMDKSIKGSGLKKGAEVPNEELINLLLKFEVKEVILEFTKQQKEEDTILVFNVTQLGTEAAVRTFDLTAVSYLRKISLDYHEIQGSKKKPLHLISSSDKPGLDLLKVEYIKADKNGPSFQTTFEKTEQTLKVAFSSLNLLLHTQALLSSINYLTTIIPSDGQKMDDTKEVQVSTEKQQKNSALQKVIVSSKDSDIIYFKLFAKLNAFCVFVCDEKTNIAEIKIQGLDSFLSLQSRKQSLFARLENIIVTDVDPKTVHKKAVSIMGNEVFHFNLDLYPDATEGDSYTDMSKVDGVVSLNVGCIQIVYLHKFLMSLLSFLNNFQTAKEALSAATAQAAEKAATSVKDLAQRSFRVSINVDLKAPVIIIPQSSVSTNAVVVDLGLIRVQNQFSLVSGEDYSDPPVIDRMDVQLTKLKLSRTVIQPGSCHPDIQLLHPINLELSVNRNLAASWYHKMPVMEINGHLESMNVNLNQEDLNLLCRILAENLGEVTEELNKVEPRVQETGKIKEPLEISTLKQDVRVSQDTLTAGEEEIRSVDIVNMLLKFEIKEVVITLMEKAEKKGKPLHELNVLQLGLEARIKAYDLTAEAYLKKISMRCFEFADSKGEPLHIINSSNATNEHLLKMLLTKADSDGPEFKTTHDNTKQRLKVSFSSLDLVLHLEALLSLMDFLSSAIPSSEPSKKESALKPLVGESRSIIAKTVSSHTSQDSVFDLKVIAELNAFNIFVCDQKCNIADIRIHGMDASVSVRPKQTDVFARLKDIIVTNVDLLSIHKKAVSILGDEVFRFQMTLYPDATEGKAYADMSKVDGRLSLKVGCIQIVYVHKFFMSLLNFLNNFQTAKEALSTATVQAAERAASSMKDLAEKSFRLLMDINLKAPVIIIPQSSVSPNAVIADLGLIKVENKFSIVSMDTSLPPVIDKMDIQLTQLKLSRTILQAGLPQHPQHDIEILKPVNMLLSIRRNLAATWYGQIPGMEIKGKLKPMQVALSKDDLTVLMRILLENLGEASSQPSPTQPTQEAVRVIKDVSSKLDHLKEQEDLTDSKLSLDQNVTLQFDFHFESLSVVLYNSDTSQESKLSFHNDNFRLGELRLHLMASAGKMFKDGSMDISVKLKTCTLDDLREGIERATSRMIDKKNGQNDNSSMIDISYKQGKNGSHVDAVLDKLYVCASVEFLMTVADFFIKAVPQSPENTTKESQIPLRQTALAKIKMEKDDSVRPNMTLKAKITDPEVVFVANLTKADAPALTASFQCNLSLSTSKLEQMMEASVRDLKVLACPFLRERRGKNITTVLQPCTLFMEKCTWASGKENINVKVEEFTIKISPIILNTVMTIMAALSPKTKDDESKDTSKEMENLWGVKSISDYNSWFLGVDMATEITENFKDIENPLIEENCTVVIESVQVTLECGLGHRTVPLLLAESKFSGNIKNWTSLMTAAADMTLEVHYYNETHAVWEPLIERVEGKRPWNLRLAVKKNPVQDKSLMPGDDFMVLPEPQTEVNISSGDTMNITVSKSCLNVFNNLAKGFSEGTASTFDYSLKDRAPFTVTNSVGVPIKVQPSHNLKVMGSLEKSDVCDVGAGQSLELEYANVEPSHQGKLSILSRQESSLFTLTFAPHGYTEVAKVPVARPGRRLYNVSNPNASHSNSLVVQIDATEGNKVITLRSPLQIKNHFSIAFIIYKYVKNVKLLERIGVARPEEEFHVPLDSYRCQLFIQPAGILESQYKVSTTYISWKEELHRSREVKCILQCPSTEINFLPLIVNTVAVPDELSYICAHGEDWDPAYIIHLYPTVTLRNFLPYSLRYLLEGTAETHELAEGCASDVLHSRISGEIMELVLMKYQGKNWNGHFRICDTLPEFFLVCFSSDSAETLTVDLSIHVKRIGSQMELSIFSPYWLINKTSRVLQYRSEDIHVKHPADFRDIILFSFKKKNIFSKNKVQLKISTSSWSNSFSLDTVGNYGCVKCPANNMEYLVGVSIKMSSFNLTRIVTLTPFYTIENKSSLEIEVGEIASDGSMPTNKWNYIASSECLPFWPEKFSGKLCVRVVGYEESSKPFFYNQRDNGTLLSLEDLNGGLLVDVETATHSTVISFSDYHEGSAPALIINHTPWDVLTYKQRGSQEEMVLLPRQGRLFAWADPTGTRKLTWSYAANIGEHDLLKDECGQFPYDANIQIHWVSFLDGRQRVLLFTDDVALVSKALQAEEMEQANHEINFSLHSLGLSLVNNENKQEVSYIGITSSGVVWEMKPKQKWKPFSQKQIILLEKSYKKYLESREHGWIKVDDNFEVNFGKDLMEMRLPFRCPIKRDFLSGIQVEFKQSPHQRSLRARLYWLQVDSQLPGTVFPVVFHPVAPPKSIALDSEPKPFIDVSIITRFNEYSKVLQFKYFMVLIQEMALKVDQGFLGAITALFTPTADPEAERKRTELIQKESDALNTELVETSVTDTSILSFFEHFHISPIKLHLSLSLGSGGEESDKEEQEMIPIHSINLLLKSIGATLTDVDDLIFKLAYYEIRYQFYNRDQLMWSVVRHYSEQFLKQMYVLVLGLDVLGNPFGLIRGLSEGFEALFYEPFQGAVQGPEEFAEGLVIGVRSLFGHTVGGAAGVVSRITGSVGKGLAAITMDKEYQQKRREEMGRQPKDFGDSLARGGKGLLRGVVGGVTGIITKPVEGAKKEGAAGFFKGIGKGLVGAVARPTGGIIDMASSTFQGIQRAAESTEEVSRLRSPRLIHEDGIIRPYDRQESEGYDLFENHIKKLKEETYRYHCAIPSSRKTTLMVTNRRVLCIKEVEILGHMSIDWQYPFEDFVQSPGVDGNLLKISVEKQGLFQKKDSANQGYVQKIYLQDATTAERACHAIVDAQSVRHQQKLMKQSSLKLLRPQILS", "length": 3714, "header": "tr|A0A5G2QD22-1|A0A5G2QD22_PIG Isoform 1 of Vacuolar protein sorting 13 homolog C OS=Sus scrofa OX=9823 GN=VPS13C PE=3 SV=2 CANONICAL=A0A5G2QD22-1" }, "isoforms": [ { "isoform_ac": "A0A287AZG6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AZG6/entry", "sequence": { "sequence": "MVLESVVADLLNRFLGDYVENLNKSQLKLGIWGGKREGAASELDVPFKVKAGQIDKLTLKIPWKNLYGEAVVATLEGLYLLIVPGASIKYDAEKEEKSLQDSKQKELSRIEEALQKAAEKDKPKEAKKDTFLEKLATQVIKNVQVKITDIHIKYEDDVTDPKRPLSFGVTLGELSLLTANEHWTPCILNEAEKIIYKLIRLDSLSAYWNVNCSMSYQGTREQILDQLKSEILTSSSVPPNHQYIFQPISASAKLYMNPYAEAELKTPKLDWNIEVQNIAIELTKPQYLSMIDFLESVDYMVRNAPYRKYKPYLPLHNHGRQWWKYAIDSVLEVHIRRHTQMWSWSNIKKHRQLLKSYKSAYKNKLTQTKVPEEIQKQIQDLEKTLDVFNIILARQQAQVEVIRSGQKLRKKSAETGEKRGGWFSGFWGKKESKKKDEESLIPETIDDLMTPEEKDKLFTAIGYSESAHNLTLPKQYVAYIVALKLVSTSVTIRENKNVPEILKIQIIGLGTHVSQRPGAQALKVAAKLEHWYITGLRQQDIIPSLVASIGDTASSLLKIEFETNPENSTADQTLVVQSQPVEVVYDAKTINAVVEFFQSNKGLDLEQITSATLMKLEEIKERTATGLTHIIETRKVLDLRINLKPSYLIVPQTGFHHEKSDLLILDFGTFQLNSKDQGLQKTNNSSLEEIMDKAYDKFDVEIKNVQLLFARAEENWKKCRFQHPSTMHILQPMDIHVEVAKAMVEKDTRMARFKVSGGLPLMHVRISDQKMKDVLSLINSIPLPQKPSAQTPTPERQISTIPIISDRTKDLLGTPLLLDGVESESDDEYFDAEDGDTQMDKSIKGSGLKKGAEVPNEELINLLLKFEVKEVILEFTKQQKEEDTILVFNVTQLGTEAAVRTFDLTAVSYLRKISLDYHEIQGSKKKPLHLISSSDKPGLDLLKVEYIKADKNGPSFQTTFEKTEQTLKVAFSSLNLLLHTQALLSSINYLTTIIPSDGQKMDDTKEVQVSTEKQQKNSALQKVIVSSKDSDIIYFKLFAKLNAFCVFVCDEKTNIAEIKIQGLDSFLSLQSRKQSLFARLENIIVTDVDPKTVHKKAVSIMGNEVFHFNLDLYPDATEGDSYTDMSKVDGVVSLNVGCIQIVYLHKFLMSLLSFLNNFQTAKEALSAATAQAAEKAATSVKDLAQRSFRVSINVDLKAPVIIIPQSSVSTNAVVVDLGLIRVQNQFSLVSGEDYSDPPVIDRMDVQLTKLKLSRTVIQPGSCHPDIQLLHPINLELSVNRNLAASWYHKMPVMEINGHLESMNVNLNQEDLNLLCRILAENLGEVTEELNKVEPRVQETGKIKEPLEISTLKQDVRVSQDTLTAGEEEIRSVDIVNMLLKFEIKEVVITLMEKAEKKGKPLHELNVLQLGLEARIKAYDLTAEAYLKKISMRCFEFADSKGEPLHIINSSNATNEHLLKMLLTKADSDGPEFKTTHDNTKQRLKVSFSSLDLVLHLEALLSLMDFLSSAIPSSEPSKKESALKPLVGESRSIIAKTVSSHTSQDSVFDLKVIAELNAFNIFVCDQKCNIADIRIHGMDASVSVRPKQTDVFARLKDIIVTNVDLLSIHKKAVSILGDEVFRFQMTLYPDATEGKAYADMSKVDGRLSLKVGCIQIVYVHKFFMSLLNFLNNFQTAKEALSTATVQAAERAASSMKDLAEKSFRLLMDINLKAPVIIIPQSSVSPNAVIADLGLIKVENKFSIVSMDTSLPPVIDKMDIQLTQLKLSRTILQAGLPQHPQHDIEILKPVNMLLSIRRNLAATWYGQIPGMEIKGKLKPMQVALSKDDLTVLMRILLENLGEASSQPSPTQPTQEAVRVIKDVSSKLDHLKEQEDLTDSKLSLDQNVTLQFDFHFESLSVVLYNSDTSQESKLSFHNDNFRLGELRLHLMASAGKMFKDGSMDISVKLKTCTLDDLREGIERATSRMIDKKNGQNDNSSMIDISYKQGKNGSHVDAVLDKLYVCASVEFLMTVADFFIKAVPQSPENTTKESQIPLRQTALAKIKMEKDDSVRPNMTLKAKITDPEVVFVANLTKADAPALTASFQCNLSLSTSKLEQMMEASVRDLKVLACPFLRERRGKNITTVLQPCTLFMEKCTWASGKENINVKVEEFTIKISPIILNTVMTIMAALSPKTKDDESKDTSKEMENLWGVKSISDYNSWFLGVDMATEITENFKDIENPLIEENCTVVIESVQVTLECGLGHRTVPLLLAESKFSGNIKNWTSLMTAAADMTLEVHYYNETHAVWEPLIERVEGKRPWNLRLAVKKNPVQDKSLMPGDDFMVLPEPQTEVNISSGDTMNITVSKSCLNVFNNLAKGFSEGTASTFDYSLKDRAPFTVTNSVGVPIKVQPSHNLKVMGSLEKSDVCDVGAGQSLELEYANVEPSHQGKLSILSRQESSLFTLTFAPHGYTEVAKVPVARPGRRLYNVSNPNASHSNSLVVQIDATEGNKVITLRSPLQIKNHFSIAFIIYKYVKNVKLLERIGVARPEEEFHVPLDSYRCQLFIQPAGILESQYKVSTTYISWKEELHRSREVKCILQCPSTEINFLPLIVNTVAVPDELSYICAHGEDWDPAYIIHLYPTVTLRNFLPYSLRYLLEGTAETHELAEGCASDVLHSRISGEIMELVLMKYQGKNWNGHFRICDTLPEFFLVCFSSDSAETLTVDLSIHVKRIGSQMELSIFSPYWLINKTSRVLQYRSEDIHVKHPADFRDIILFSFKKKNIFSKNKVQLKISTSSWSNSFSLDTVGNYGCVKCPANNMEYLVGVSIKMSSFNLTRIVTLTPFYTIENKSSLEIEVGEIASDGSMPTNKWNYIASSECLPFWPEKFSGKLCVRVVGYEESSKPFFYNQRDNGTLLSLEDLNGGLLVDVETATHSTVISFSDYHEGSAPALIINHTPWDVLTYKQRGSQEEMVLLPRQGRLFAWADPTGTRKLTWSYAANIGEHDLLKDECGQFPYDANIQIHWVSFLDGRQRVLLFTDDVALVSKALQAEEMEQANHEINFSLHSLGLSLVNNENKQEVSYIGITSSGVVWEMKPKQKWKPFSQKQIILLEKSYKKYLESREHGWIKVDDNFEVNFGKDLMEMRLPFRCPIKRDFLSGIQVEFKQSPHQRSLRARLYWLQVDSQLPGTVFPVVFHPVAPPKSIALDSEPKPFIDVSIITRFNEYSKVLQFKYFMVLIQEMALKVDQGFLGAITALFTPTADPEAERKRTELIQKESDALNTELVETSVTDTSILSFFEHFHISPIKLHLSLSLGSGGEESDKEEQEMIPIHSINLLLKSIGATLTDVDDLIFKLAYYEIRYQFYNRDQLMWSVVRHYSEQFLKQMYVLVLGLDVLGNPFGLIRGLSEGFEALFYEPFQGAVQGPEEFAEGLVIGVRSLFGHTVGGAAGVVSRITGSVGKGLAAITMDKEYQQKRREEMGRQPKDFGDSLARGGKGLLRGVVGGVTGIITKPVEGAKKEGAAGFFKGIGKGLVGAVARPTGGIIDMASSTFQGIQRAAESTEEVSRLRSPRLIHEDGIIRPYDRQESEGYDLFENHIKKLKEETYRYHCAIPSSRKTTLMVTNRRVLCIKEVEILGHMSIDWQYPFEDFVQSPGVDGNLLKISVEKQGLFQKKDSANQGYVQKIYLQDATTAERACHAIVDAQSVRHQQKLMKQSSLKLLRPQILS", "length": 3706, "header": "tr|A0A287AZG6-1|A0A5G2QD22_PIG Computationally mapped isoform of Vacuolar protein sorting 13 homolog C OS=Sus scrofa OX=9823 GN=VPS13C PE=3 SV=2 CANONICAL=A0A5G2QD22-1" }, "locus": { "chromosome": "1", "start_pos": 110103644, "end_pos": 109931389, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062985.2", "url": "https://www.ensembl.org/id/ENSSSCT00000062985.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049252.2", "url": "https://www.ensembl.org/id/ENSSSCP00000049252.2" } ] } }, { "isoform_ac": "A0A287BST0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BST0/entry", "sequence": { "sequence": "MVLESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENALSELDVPFKVKAGQIDKLTLKIPWKNLYGEAVVATLEGLYLLIVPGASIKYDAEKEEKSLQDSKQKELSRIEEALQKAAEKGAHSGEFIYGLESFVYKDIKPGRKRKKHKKHFKKPFKGLDRSKDKPKEAKKDTFLEKLATQVIKNVQVKITDIHIKYEDDVTDPKRPLSFGVTLGELSLLTANEHWTPCILNEAEKIIYKLIRLDSLSAYWNVNCSMSYQGTREQILDQLKSEILTSSSVPPNHQYYLSMIDFLESVDYMVRNAPYRKYKPYLPLHNHGRQWWKYAIDSVLEVHIRRHTQMWSWSNIKKHRQLLKSYKSAYKNKLTQTKVPEEIQKQIQDLEKTLDVFNIILARQQAQVEVIRSGQKLRKKSAETGEKRGGWFSGFWGKKESKKKDEESLIPETIDDLMTPEEKDKLFTAIGYSESAHNLTLPKQYVAYIVALKLVSTSVTIRENKNVPEILKIQIIGLGTHVSQRPGAQALKVAAKLEHWYITGLRQQDIIPSLVASIGDTASSLLKIEFETNPENSTADQTLVVQSQPVEVVYDALNSKDQGLQKTNNSSLEEIMDKAYDKFDVEIKNVQLLFARAEENWKKCRFQHPSTMHILQPMDIHVEVAKAMVEKDTRMARFKVSGGLPLMHVRISDQKMKDVLSLINSIPLPQKPSAQTPTPERQISTIPIISDRTKDLLGTPLLLDGVESESDDEYFDAEDGDTQMDKSIKGSGLKKGAEVPNEELINLLLKFEVKEVILEFTKQQKEEDTILVFNVTQLGTEAAVRTFDLTAVSYLRKISLDYHEIQGSKKKPLHLISSSDKPGLDLLKVEYIKADKNGPSFQTTFEKTEQTLKVAFSSLNLLLHTQALLSSINYLTTIIPSDGQKMDDTKEVQVSTEKQQKNSALQKVIVSSKDSDIIYFKLFAKLNAFCVFVCDEKTNIAEIKIQGLDSFLSLQSRKQSLFARLENIIVTDVDPKTVHKKAVSIMGNEVFHFNLDLYPDATEGDSYTDMSKVDGVVSLNVGCIQIVYLHKFLMSLLSFLNNFQTAKEALSAATAQAAEKAATSVKDLAQRSFRVSINVDLKAPVIIIPQSSVSTNAVVVDLGLIRVQNQFSLVSGEDYSDPPVIDRMDVQLTKLKLSRTVIQPGSCHPDIQLLHPINLELSVNRNLAASWYHKMPVMEINGHLESMNKIKEPLEISTLKQDVRVSQDTLTAGEEEIRSVDIVNMLLKFEIKEVVITLMEKAEKKGKPLHELNVLQLGLEARIKAYDLTAEAYLKKISMRCFEFADSKGEPLHIINSSNATNEHLLKMLLTKADSDGPEFKTTHDNTKQRLKVSFSSLDLVLHLEALLSLMDFLSSAIPSSEPSKKESALKPLVGESRSIIAKTGMDASVSVRPKQTDVFARLKDIIVTNVDLLSIHKKAVSILGDEVFRFQMTLYPDATEGKAYADMSKVDGRLSLKVGCIQIVYVHKFFMSLLNFLNNFQTAKEALSTATVQAAERAASSMKDLAEKSFRLLMDINLKAPVIIIPQSSVSPNAVIADLGLIKVENKFSIVSMHSLPPVIDKMDIQLTQLKLSRTILQAGLPQHPQHDIEILKPVNMLLSIRRNLAATWYGQIPGMEIKGKLKPMQVALSKDDLTVLMRILLENLGEASSQPSPTQPTQEAVRVIKDVSSKLDHLKEQEDLTDSKLSLDQNVTLQFDFHFESLSVVLYNSDTSQESKLSFHNDNFRLGELRLHLMASAGKMFKDGSMDISVKLKTCTLDDLREGIERATSRMIDKKNGQNDNSSMIDISYKQGKNGSHVDAVLDKLYVCASVEFLMTVADFFIKAVPQSPENTTKESQIPLRQTALAKIKMEKDDSVRPNMTLKAKITDPEVVFVANLTKADAPALTASFQCNLSLSTSKLEQMMEASVRDLKVLACPFLRERRGKNITTVLQPCTLFMEKCTWASGKENINVKVEEFTIKISPIILNTVMTIMAALSPKTKDDESKDTSKEMENLWGVKSISDYNSWFLGVDMATEITENFKDIENPLIEENCTVVIESVQVTLECGLGHRTVPLLLAESKFSGNIKNWTSLMTAAADMTLEVHYYNETHAVWEPLIERVEGKRPWNLRLAVKKNPVQDKSLMPGDDFMVLPEPQTEVNISSGDTMNITVSKSCLNVFNNLAKGFSEGTASTFDYSLKDRAPFTVTNSVGVPIKVQPSHNLKVMGSLEKSDVCDVGAGQSLELEYANVEPSHQGKLSILSRQESSLFTLTFAPHGYTEVAKVPVARPGRRLYNVSNPNASHSNSLVVQIDATEGNKVITLRSPLQIKNHFSIAFIIYKYVKNVKLLERIGVARPEEEFHVPLDSYRCQLFIQPAGILESQYKVSTTYISWKEELHRSREVKCILQCPSTEINFLPLIVNTVAVPDELSYICAHGEDWDPAYIIHLYPTVTLRNFLPYSLRYLLEGTAETHELAEGCASDVLHSRISGEIMELVLMKYQGKNWNGHFRICDTLPEFFLVCFSSDSAETLTVDLSIHVKRIGSQMELSIFSPYWLINKTSRVLQYRSEDIHVKHPADFRDIILFSFKKKNIFSKNKVQLKISTSSWSNSFSLDTVGNYGCVKCPANNMEYLVGVSIKMSSFNLTRIVTLTPFYTIENKSSLEIEVGEIASDGSMPTNKWNYIASSECLPFWPEKFSGKLCVRVVGYEESSKPFFYNQRDNGTLLSLEDLNGGLLVDVETATHSTVISFSDYHEGSAPALIINHTPWDVLTYKQRGSQEEMVLLPRQGRLFAWADPTGTRKLTWSYAANIGEHDLLKDECGQFPYDANIQIHWVSFLDGRQRVLLFTDDVALVSKALQAEEMEQANHEINFSLHSLGLSLVNNENKQEVSYIGITSSGVVWEMKPKQKWKPFSQKQIILLEKSYKKYLESREHGWIKVDDNFEVNFGKDLMEMRLPFRCPIKRDFLSGIQVEFKQSPHQRSLRARLYWLQVDSQLPGTVFPVVFHPVAPPKSIALDSEPKPFIDVSIITRFNEYSKVLQFKYFMVLIQEMALKVDQGFLGAITALFTPTADPEAERKRTELIQKESDALNTELVETSVTDTSILSFFEHFHISPIKLHLSLSLGSGGEESDKEEQEMIPIHSINLLLKSIGATLTDVDDLIFKLAYYEIRYQFYNRDQLMWSVVRHYSEQFLKQMYVLVLGLDVLGNPFGLIRGLSEGFEALFYEPFQGAVQGPEEFAEGLVIGVRSLFGHTVGGAAGVVSRITGSVGKGLAAITMDKEYQQKRREEMGRQPKDFGDSLARGGKGLLRGVVGGVTGIITKPVEGAKKEGAAGFFKGIGKGLVGAVARPTGGIIDMASSTFQGIQRAAESTEEVSRLRSPRLIHEDGIIRPYDRQESEGYDLFEQELEVQE", "length": 3428, "header": "tr|A0A287BST0-1|A0A287BST0_PIG Computationally mapped isoform of Vacuolar protein sorting 13 homolog C OS=Sus scrofa OX=9823 GN=VPS13C PE=3 SV=2 CANONICAL=A0A5G2QD22-1" }, "locus": { "chromosome": "1", "start_pos": 110090497, "end_pos": 109931389, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053839.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053839.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059238.2", "url": "https://www.ensembl.org/id/ENSSSCP00000059238.2" } ] } }, { "isoform_ac": "A0A5G2QD22-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD22/entry", "sequence": { "sequence": "MVLESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENALSELDVPFKVKAGQIDKLTLKIPWKNLYGEAVVATLEGLYLLIVPGASIKYDAEKEEKSLQDSKQKELSRIEEALQKAAEKDKPKEAKKDTFLEKLATQVIKNVQVKITDIHIKYEDDVTDPKRPLSFGVTLGELSLLTANEHWTPCILNEAEKIIYKLIRLDSLSAYWNVNCSMSYQGTREQILDQLKSEILTSSSVPPNHQYIFQPISASAKLYMNPYAEAELKTPKLDWNIEVQNIAIELTKPQYLSMIDFLESVDYMVRNAPYRKYKPYLPLHNHGRQWWKYAIDSVLEVHIRRHTQMWSWSNIKKHRQLLKSYKSAYKNKLTQTKVPEEIQKQIQDLEKTLDVFNIILARQQAQVEVIRSGQKLRKKSAETGEKRGGWFSGFWGKKESKKKDEESLIPETIDDLMTPEEKDKLFTAIGYSESAHNLTLPKQYVAYIVALKLVSTSVTIRENKNVPEILKIQIIGLGTHVSQRPGAQALKVAAKLEHWYITGLRQQDIIPSLVASIGDTASSLLKIEFETNPENSTADQTLVVQSQPVEVVYDAKTINAVVEFFQSNKGLDLEQITSATLMKLEEIKERTATGLTHIIETRKVLDLRINLKPSYLIVPQTGFHHEKSDLLILDFGTFQLNSKDQGLQKTNNSSLEEIMDKAYDKFDVEIKNVQLLFARAEENWKKCRFQHPSTMHILQPMDIHVEVAKAMVEKDTRMARFKVSGGLPLMHVRISDQKMKDVLSLINSIPLPQKPSAQTPTPERQISTIPIISDRTKDLLGTPLLLDGVESESDDEYFDAEDGDTQMDKSIKGSGLKKGAEVPNEELINLLLKFEVKEVILEFTKQQKEEDTILVFNVTQLGTEAAVRTFDLTAVSYLRKISLDYHEIQGSKKKPLHLISSSDKPGLDLLKVEYIKADKNGPSFQTTFEKTEQTLKVAFSSLNLLLHTQALLSSINYLTTIIPSDGQKMDDTKEVQVSTEKQQKNSALQKVIVSSKDSDIIYFKLFAKLNAFCVFVCDEKTNIAEIKIQGLDSFLSLQSRKQSLFARLENIIVTDVDPKTVHKKAVSIMGNEVFHFNLDLYPDATEGDSYTDMSKVDGVVSLNVGCIQIVYLHKFLMSLLSFLNNFQTAKEALSAATAQAAEKAATSVKDLAQRSFRVSINVDLKAPVIIIPQSSVSTNAVVVDLGLIRVQNQFSLVSGEDYSDPPVIDRMDVQLTKLKLSRTVIQPGSCHPDIQLLHPINLELSVNRNLAASWYHKMPVMEINGHLESMNVNLNQEDLNLLCRILAENLGEVTEELNKVEPRVQETGKIKEPLEISTLKQDVRVSQDTLTAGEEEIRSVDIVNMLLKFEIKEVVITLMEKAEKKGKPLHELNVLQLGLEARIKAYDLTAEAYLKKISMRCFEFADSKGEPLHIINSSNATNEHLLKMLLTKADSDGPEFKTTHDNTKQRLKVSFSSLDLVLHLEALLSLMDFLSSAIPSSEPSKKESALKPLVGESRSIIAKTVSSHTSQDSVFDLKVIAELNAFNIFVCDQKCNIADIRIHGMDASVSVRPKQTDVFARLKDIIVTNVDLLSIHKKAVSILGDEVFRFQMTLYPDATEGKAYADMSKVDGRLSLKVGCIQIVYVHKFFMSLLNFLNNFQTAKEALSTATVQAAERAASSMKDLAEKSFRLLMDINLKAPVIIIPQSSVSPNAVIADLGLIKVENKFSIVSMDTSLPPVIDKMDIQLTQLKLSRTILQAGLPQHPQHDIEILKPVNMLLSIRRNLAATWYGQIPGMEIKGKLKPMQVALSKDDLTVLMRILLENLGEASSQPSPTQPTQEAVRVIKDVSSKLDHLKEQEDLTDSKLSLDQNVTLQFDFHFESLSVVLYNSDTSQESKLSFHNDNFRLGELRLHLMASAGKMFKDGSMDISVKLKTCTLDDLREGIERATSRMIDKKNGQNDNSSMIDISYKQGKNGSHVDAVLDKLYVCASVEFLMTVADFFIKAVPQSPENTTKESQIPLRQTALAKIKMEKDDSVRPNMTLKAKITDPEVVFVANLTKADAPALTASFQCNLSLSTSKLEQMMEASVRDLKVLACPFLRERRGKNITTVLQPCTLFMEKCTWASGKENINVKVEEFTIKISPIILNTVMTIMAALSPKTKDDESKDTSKEMENLWGVKSISDYNSWFLGVDMATEITENFKDIENPLIEENCTVVIESVQVTLECGLGHRTVPLLLAESKFSGNIKNWTSLMTAAADMTLEVHYYNETHAVWEPLIERVEGKRPWNLRLAVKKNPVQDKSLMPGDDFMVLPEPQTEVNISSGDTMNITVSKSCLNVFNNLAKGFSEGTASTFDYSLKDRAPFTVTNSVGVPIKVQPSHNLKVMGSLEKSDVCDVGAGQSLELEYANVEPSHQGKLSILSRQESSLFTLTFAPHGYTEVAKVPVARPGRRLYNVSNPNASHSNSLVVQIDATEGNKVITLRSPLQIKNHFSIAFIIYKYVKNVKLLERIGVARPEEEFHVPLDSYRCQLFIQPAGILESQYKVSTTYISWKEELHRSREVKCILQCPSTEINFLPLIVNTVAVPDELSYICAHGEDWDPAYIIHLYPTVTLRNFLPYSLRYLLEGTAETHELAEGCASDVLHSRISGEIMELVLMKYQGKNWNGHFRICDTLPEFFLVCFSSDSAETLTVDLSIHVKRIGSQMELSIFSPYWLINKTSRVLQYRSEDIHVKHPADFRDIILFSFKKKNIFSKNKVQLKISTSSWSNSFSLDTVGNYGCVKCPANNMEYLVGVSIKMSSFNLTRIVTLTPFYTIENKSSLEIEVGEIASDGSMPTNKWNYIASSECLPFWPEKFSGKLCVRVVGYEESSKPFFYNQRDNGTLLSLEDLNGGLLVDVETATHSTVISFSDYHEGSAPALIINHTPWDVLTYKQRGSQEEMVLLPRQGRLFAWADPTGTRKLTWSYAANIGEHDLLKDECGQFPYDANIQIHWVSFLDGRQRVLLFTDDVALVSKALQAEEMEQANHEINFSLHSLGLSLVNNENKQEVSYIGITSSGVVWEMKPKQKWKPFSQKQIILLEKSYKKYLESREHGWIKVDDNFEVNFGKDLMEMRLPFRCPIKRDFLSGIQVEFKQSPHQRSLRARLYWLQVDSQLPGTVFPVVFHPVAPPKSIALDSEPKPFIDVSIITRFNEYSKVLQFKYFMVLIQEMALKVDQGFLGAITALFTPTADPEAERKRTELIQKESDALNTELVETSVTDTSILSFFEHFHISPIKLHLSLSLGSGGEESDKEEQEMIPIHSINLLLKSIGATLTDVDDLIFKLAYYEIRYQFYNRDQLMWSVVRHYSEQFLKQMYVLVLGLDVLGNPFGLIRGLSEGFEALFYEPFQGAVQGPEEFAEGLVIGVRSLFGHTVGGAAGVVSRITGSVGKGLAAITMDKEYQQKRREEMGRQPKDFGDSLARGGKGLLRGVVGGVTGIITKPVEGAKKEGAAGFFKGIGKGLVGAVARPTGGIIDMASSTFQGIQRAAESTEEVSRLRSPRLIHEDGIIRPYDRQESEGYDLFENHIKKLKEETYRYHCAIPSSRKTTLMVTNRRVLCIKEVEILGHMSIDWQYPFEDFVQSPGVDGNLLKISVEKQGLFQKKDSANQGYVQKIYLQDATTAERACHAIVDAQSVRHQQKLMKQSSLKLLRPQILS", "length": 3714, "header": "tr|A0A5G2QD22-1|A0A5G2QD22_PIG Isoform 1 of Vacuolar protein sorting 13 homolog C OS=Sus scrofa OX=9823 GN=VPS13C PE=3 SV=2 CANONICAL=A0A5G2QD22-1" }, "locus": { "chromosome": "1", "start_pos": 110103644, "end_pos": 109931389, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000086072.2", "url": "https://www.ensembl.org/id/ENSSSCT00000086072.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062501.2", "url": "https://www.ensembl.org/id/ENSSSCP00000062501.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1856, "start_aa": "Thr", "end_pos": 1856, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1856", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287AZG6", "url": "https://www.uniprot.org/uniprotkb/A0A287AZG6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8I5ZMR7-1", "protein_name": "Vacuolar protein sorting 13 homolog C", "gene_name": "Vps13c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVLESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENALSELDVPFKVKAGQIDKLTLKIPWKNLYGEAVVATLEGLYLLVVPGASIKYDAEKEEKSLQDIKQKELCRIEEALQKAAEKGAHGEFMYGLESLLYKDVKPDKPKEAKKDTFLEKLATQVIKNVQVKITDIHIKYEDDVTDPERPLSFGVTLREFSLLTTNEHWTPCILNEAEKIIYKLVKLDSLSAYWNVGCCVSYRGSREHILDQLKCEILTSTNIPPDHQYIFQPISASAKLYMNPGAESEFKTPKLDGNVEVQNIAIELTKPQYLSMIDFLESLDYMVRNAPYRKYRPCLPLHTDCRQWWKYAIDSVLEVHIRRYTRPWSWNNIKNHRQLLKSYKMAYKNKLTQTKVSEEIQKQIQDLEKSLDVFNIILVRQQAQVEVIHSGQKLRKKSSEAGEKRGWFSGFWGKKECKKRDEESSVPETIDDLMTPEEKDKLFTAIGYSENAYNLALPKQYVAHILTLKLLSTSIVVRENRNVPEILRIQIIGLGTQVSQRPGAQALKIEAKLEHWYVTGLRQQDIVPSLVASIGDTTSSLLKIEFETNPENSPADQTLIVQSQPVEVIYDAKTINAVVEFFQSNKGLDLEQITSATLMKLEEIKARTATGLTHIIETRKVLDLRINLKPSYLIIPQTGFHHEKSNLLILDFGTFQLNSKDQGAQKTTNSSLEEIIDKAYDKFDVEIKSVQLLFAKAGENWKKCRFQHPSTMHILQPMDIHVELAKAMVEKDVRMARFKVSGGLPLMHVRISDQKIRDALCLINSIPLPQKSSTQSPERQVASIPVLSGGTKVLLGTSLLLDGVESESDDEYFDAEDGDSQAARPVKASELRKAAEVPNEELVTLLLKFEIKEVVLELTKQQKEEETILVFNVTQLGTEATMRTFDLTAVSYLRKISLDYHEIKGSRKKPIHLVSSSDRPGLDLLKVEYIKVDRNGPSFQTTFEKTEQTVKVAFSSLNLLLQTQALLSSLNYLTTVIPSDSQNAGVAKEVQTITEKQKNSPLQKVMVPSRDSDVIGFRLFAKLNAFCVTVCDEKSNIAEIKIQGLDSSLSLQSKKQSLFARLENIIVTDVDPKTVHKKAVSIVGNEVFRFNLDLYPDATEGDSYTDMSTVDGVVALHVGCIQIVYLHKFLMSLLSFLNNFQVAKEALSAATAQAAEKAATSVKDLAQRSFRVSVDIDLKAPVIVIPQSSLSTNAVVVDLGLIRVHNQFSLVSGEDAVNPPVIDKMKVQLTKLKLCRTAIQSGVSHPDIQLLHPINLEFCVNRNLAANWYHKVPVVEIKGRLDSMNVSLNQEDLNLLFRILAENLGEATEDIDKGKPRIQEIGKTKACQDVSTPQDVHTTQGVPAARVEETRPVDIINVLLNFEIKEVVVTLMKKAEKKGNPLHELKILHLGMEAKVKAHDMTAKAYLRKITMRCFDFPDSKGEPLHIVNSSDVSDGTLLTMLFIKADSDGPDFQTIHDNTKQKLKVSFSSLDLVLHLEALLSLMDFLSCAVPSPDSSSSETESELKPLVGGSRSLAVKAVPSSSEGDVFDLKVTAELNAFNIFICDQKSNIAEIKIHGMDASVSMKAKQTDVFARLKNIIVMNVDSLSIHKKAVSILGDEVFRFQMSLYPDATEGENYGDMSKVDGRLGLKVGCIQIVYVHKFFMSLLSFLNNFQAAKEALSTATVQAAERAASSVKDLAQKSFRLLMDIDLKAPVITIPQSSVSPNVVIADLGLIRVENKFSLVSVEQLSLPPVADKMSVQLTQLKLSRTVLQADSPQHDIEILKPVNMLLSIQRNLSAAWYTQIPGMEITGKLKPMQVALSQDDLTVLMKILLENLGEASSQPSPTQFAQEAARVKRDTRSGPDCLKEQDLAEPKPPGDQTVTLQFDFHFDSLSIVLYNSDGCQESRLSFHNDSFRLGELTLHLMASAGKMFKDGSMNVSLKLKTCTLDDLREGIERATSRMIDKKNDQDGNSSMIDVSYSQDKNGSQIDAVLDKLYVCASVEFLMTVADFFIKAMPESPENIAKDIQIPSRKTAPGRVKMEKDDSVKPNMTLKAMITDPEVVFVANLTKADAPALTASFQCNLSLSTSKLEQMMEASVRDLKVLACPFLRERRGKSVTTVLQPCSLFMEKCTWASGKQNINVMVKEFVIKISPIILNTVMTIMAALSPKTKEEDQEDTAEEKDSLWAIKPITDYNSWFLGVDMATEATESFRDFEHTQIEENCVVAVESVQVTLECGLGHRTVPLLLAESRFSGNIKNWTSLMAAAADMTLEVHYYNETHAVWEPLIERVEGKTPWSLKLNVKKNPLQDKSLMPGDDFIPEPHTAVHISSGSTMNITISKSCLNVFNNLAKGFSEGAASTFDYSLKDRAPFTVRNALGVPMKVQPNRNLRVMGSPEKSDVYDVGAGQHLELEYASLEPSRQGKLSLLSRQESTFFTLTFVPHGYTEVASVPVARPGRRLYNVRNPSASRSDSVLVQIDATEGNKVVTLRSPLQIKNHFSIAFIIYKFVKNVKLLERIGIVKPEEEFHVPLDSYRCQLYVQPAGSLEQQYTQSTTYISWKEELHRSREVRCMLQCPAVEVNFLPLIVNTVALPDELSYIGAHGEDWDPAYIIHLYPPLTLRNLLPYSIRYLLEGTAEAHELAEGSSADVLHSRISGEIIELVLVKYLGKNWNGHFRICDTLPEFFLVCFSSDTAEVLTVDLSVHVRRIGCRMELSVFSPYWLINKTSRVLQYRSEEIHVKHPADFRDIILFSFKKKNIFSKNKVQLKISTSAWSNGFSLDTVGSYGCVKCPATTMEYLVGVSIKMSSFNLSRIVTLTPFCTVANKSSLELEVGEIASDGSIPTNKWHYIASSECIPFWPENLSGKLCVRVVGYEGSSKPFFYNRQDNGTLLSLEDLNGGILVDINTAEHSTVITFSDYHEGSAPALIMNHTQWNVLTYKQSGSQEALVLLPGETRLFAWADPTGTRKLTWSYAANFGEHDLLKDECGQFPYDANIQIHWVSFLDGRQRVLLFTDDVALVSKALQAEEMEQADLEVALSLHSLGLSLVNNENKQEVSYVGVTSSGVVWEMKPKQKWKPFSQKQIMLLEQSYQKHLTSQDRGWIKLDSNFEVNFDKVPMEMRLPLRCPIKRDFLSGIQVEFKQSPHQRSLRARLYWLQVDNQLPGTMFPVVFHPVAPPKSIALDSEPKPFIDVSVITRFNEYSKVLQFKYFMVLIQEMALKVDQGFLGAVIALFTPTSDPEAERKRTKLIQQDIDALNTELLESSMSDMSILSFFEHFHISPVKLHLSLSLGSGGEESDKEKQEMIAIHSVNLLLKSIGATLTDVDDLIFKLAYYEIRYQFYKRDQLMWSVVRHYSEQFLKQMYVLVLGLDVLGNPFGLIRGLSEGVEALFYEPFQGAVQGPEEFAEGLVIGVRSLFGHTVGGAAGVVSRITGSVGKGLAAITMDKEYQQKRREEMGRQPKDFGDSLARGGKGFLRGVVGGVTGIITKPVEGAKKEGAAGFFKGIGKGLVGAVARPTGGIIDMASSTFQGIQRVAESTEEVSSLRPPRLIHEDGIIRPYDRQESEGSDLLENQIKKLEGEAYQFHCTVPGNKRAVLMITNRRVLFIKEVEILGHMSVDWQCLFEDFLCPPGVSENLLKISVKEQGLFHKKDSANVGYLRKIYLKDPITAKRAFEAIESAQSARQQQRLMRQSSVKQ", "length": 3718 }, "evidence": [ { "id": "A0A5G2QD22", "url": "https://omabrowser.org/oma/group/A0A5G2QD22/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V1A109-1", "protein_name": "Vacuolar protein sorting 13 homolog C", "gene_name": "VPS13C", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVLESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENALSELDVPFRIKVGQIDKLTLKIPWKNLYGEAVVATLEGLYLLIVPGASIKYDAEKEEKYLQDNKQKELARIEEALKKAAEKGAHSQDSLYGLESLIYKDTKPGRKRKKYKKHFKRPFKGRDHSKDKTKEEKKDTFLEKLATQVIKNVQVKITGIHVKYEDDITDPQRPISLGITLGELSLLTTNENWKPSILNDATKVIYKLLCLDSLSAYWNVHSKMYYHGSHEQILDQLKGGIPHGDNQPQDYQYIFRPVSASARVFINPNAEVELKTPKLDCNVEVQRIAIELTKPQYLSMIDLLESIDYMVRNAPYRKFRPNVSVHKNARQWWKYAGDSVLEVHIKRCTRMWSWSTIKQHRQLVKTYRTIYRSKLTLGKLSEETQRQIQDLEKKLDVFNIVLARQHAQLETIRSGQKVLKKKATEVEKKSGGWFSGFWGRRESKKKEDEESFVPETINELMTPEEKAKLFTAIGYSESSYHLSLPRQYVAHIVTLKLVSTSLTIKEDKNVAETLKVQIIDLSTKISQRPGAQAIKVEAKLENWYVTGLRQENIVPSLVASIGDSRSSLLKIEFNINPEESTADQSLSIESQPVEIKYDARTINAMVEFFQTSKGMDLERLTSATLMKLEEIKERTATGLAHIIEMRKVLDLKIHLKPSYLVVPQTGFYHENSNLLILDFGTFQLNSINQGNSEASSFSSLEEIMDKAYDKFDVEIKNVQLLFGRAGEDWKKARFQRSSTLHMLQPMDIHIQLAKSMVEKDTRMAKFKVSGGLPLVHIRVSDQKIKAIFDLIDSIPLPEMSSVSIPSTKAATIPAIPVDAKGLLTTHHLLAEMASDSEEEYFDFEERYEPYYRALSKGEEIENTESAKEELTDLQLKFEIKEVLLELTKQEKTEETVLVFDVKHLGTEATVRTFNLAAVSYLKTISLDYYEIGGKKVPLHLISSSDKPGLDLLKVEYIKADKNGPHFLTVFDNTEQKIQVAFSSLNILLHTEALMSAVSFLATVSPSGSGSSRETPTKEEKQQDDRTLKKVTRPFKDKDAFAFKLLARLDAFCLNLCDEKKNIAEIKIQGLDSSLLLQSNQTEFFARLKDVVVTDVDTRTLHKKAVSIVGDEVFSFSLVLYPYATEGEAYADMTKVDGTVSLKVGCIQVVYLHKFLVSLLTFLNNFQTAKEALSAATVQAAEKAATSVKDLAQRSFRLAMDIHLKAPVIVIPQSSVSFNAIVVDLGLIKVQNRFSLASPEGSLLPPIIDKMDVQLTKLKLSRASMEEGLSHQDIQILHPINLSLSVSRNLAASWFHKLPILEITGYLDTMNVAVSQEDLNVFLKVLTENLGEAEQTNAKQILQEEGRIKGMEKSTLMQSKGVSEGILSEKRKETLNEDVINVLLNFEIKEVVITLMKQLQKERYPLHILNVLQLGTKTEIRNHELTAGAYLKKIIMRCTEITDSNGDPLCIINSSSKTDEPLLKMEYIKADADGPDFVTTYSSTKQNIDVVFSCLDVVLHTEALISIMSFFTFSVPSGALPSTDKAPENKPQTEEKGSVFRPASGSTTHDDTFELKLTANLNAFSISVCDQTCRIADIRIQGMDASVAVKTKEIEVFSRLQDIIITNVDPKTIHKKAVSIMGDEVFRFQMSLYPDATAGEAYADMSKVDGKMSLKVGCIQIVYLHQFFMSLLNFLNNFQTAQEALNAVTVQAAEMAASSMKDFAKKSFRLLMDINLKAPVIVVPESSTSCNALIADLGLIRVQNEFKFVSSDESSLPPVIDNMDVQLTHLKLSRCILSADSQPDSEILCPVSLTLLVQRNLAATWYHKAPTIGIKGDLKPMQIALSQDDLTVVMKILLENLGGASSQPNTMQQSIEDNQMVRKEKVPNESDISEGQENISTSQSSAECYTVLIFDFNFESLSVTLYRSDMNQKPLLSLHNEKLCLGELRLNLLASSGKILTDGSVDVSVKLKACTLDDLRAGIQNVTARMIDKKDNTNDSSMIDVSYKQDKNGTEVVAILDKLYVCASMEFLLTVADFFINSMPTSSPERSTQLHLKNVTSVKSKPETEAPFRPNMKVKAVIMDPEIVFVANLTSADAPALKVSFQCDFSLTSGKHAQRMTAQVKDFKVLACAFLREKQDRSVTKVLQPCSLVMENMMHVSGLQTVVLTVEELTIKISPIILNTVVTIMAAIKPKTTEEDSKGAAEVPEDLWQVKPIDECNAWFLGVDVATEATETFKDHEHAVKQEKFDIVVKSVQITLECGLGHRTVPLLLAESVFSGVLKNWSSLMEVSADMSLEIHYYNETYAVWEPLIERIEGGKKQWSLKLEMKTNPVQERSLMPGDDFIVFPEPQTAVNISSKDTMNITISKCCLAVFSNLAKAFSEGTASTFDYSFKDTAPFIVKNALGVHLQVFPSSSFRIVNSAEKENVHCVESGQNMELEYSVFEAPQRRRLSALYRQESSIFSLSLELERYEKVINVPIAKPSRRLYNIKSLSDGHSDSIIVQIDATEGNKVITVRSPLQIKNHFSIPFVIYKLNRDSRLLQPIGISKPEEEFHVPLHSYRCHLYVRPTGMLEGQFRESTTNIAWREELHRSNEVKCLLQCPATETNFLPLIVSTTAVPDQLNYISAHGEEWDPAYIIHLHPTLTVRNLLPYSLRYLLEGTAEARELLEGSAADVFHSRINGEIMELVLMKYQGKNWDGHLKIHEGMPEFFSVCFTSHSATVMTVDLYVHTRRIGSRMILSVFSPYWIINKTSRILQYRAEDTHVKHPADLRDIVLFSFKKKNIFSKNKIQLCISTSTWSSSFSLDTVGSYGCVRCSANGMEYLVGVSIKMSSFNLTRIVTFTPFYTIANKSSLELEVGEIGPNGSFPTNKWNYISPSECLPFWPENSSGELCVRVVGFESVSKPFLFQVPDNGTLLRLKELTGGLLVEVNVSQHSILISFSDYHEGAAPALIVNHTSWDSLRFKQSGLQEEMELKPKQVCLFAWTDPTKTRKLTWGYSQSFGEHDLLKDECGQFPYNANTQIHWVSFLDGRQRVLLFTDDVALVSKALQAEELEQPDQEIILSIHSLGLSLVNNENKKEISYIGITSSGVVWEEKRKQKWRPFNQKQINVLEQAYQKYLCKTAFQTPGWHKLDSTTEVNFSKVPMEMRLPVRCSIRRNFLSGIQVEFKQSPHQRSLRAQLYWLQVDNQLPGSMFPVVFHPVAPPKSIALDSEPKPFIDISVITRFNEYSKVLQFKYFMVLIQEMALKIDQGFLAALSELFTPSTDPEAERQRSKLIQQDVDALNTELMETSLTDVSMLSFFELFHISPIKLHLSLSLASGAEASDKGEEMIAIHSLNLLLKSIGATLTDVDDLIFKLAFFEIKYQFYKRDQLMKRAVRHYSEEFLKQMYVLVLGLDVLGNPFGLIRGLSEGVEAFFYEPFQGAVQGPEEFAEGIVIGVKSLLGHTVGGAAGVVSRITGSVGKGLAAITMDKEYQQKRREEMGRQPRDFSGSLAKGGKGFLRGVVGGVTGIITKPVEGAKKEGAAGFFKGIGKGLVGVVARPTGGIVDMASSTFQGIQRVAESTEEVPNLRPPRFIHEDGIIRPYDRVEAEGYDLFEKLHIRKLENEKYRYHCVLPRGKRANLIVTNRRVIYVKEVEILGHLTAEWDYLFEDFTCRPTCEESVLKLTVSDPRMFQKKGSTGHVCVKAVQLQDEATAKSVCIAIEEAQATRKQQKLVKQASLRLEKPQMLS", "length": 3752 }, "evidence": [ { "id": "A0A5G2QD22", "url": "https://omabrowser.org/oma/group/A0A5G2QD22/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A1Z713-1", "protein_name": "Intermembrane lipid transfer protein Vps13", "gene_name": "Vps13", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MVFEAVVADVLNKVLGDYIENLDRNQLKIGIWGGDVVLQNLKIRENALDELDLPVQLIYGYLGKLVLKIPWKNLYSQPVIVNIEDLYVLVSPNNNVQYNAEKEAKYEMDLKKAALDALEAARKKELEMDQPKADAGFAEKLTAQIVNNLQVQITNVHLRYEDTTTTGSPFSFGISLHELELYTTDCDWEKCYMAQQASQVFKIANLSCLSAYLNCGGQLYANNKSDLSQQFKTNIACKETKPNYNYVLGPISCNAKLKLNMNPELDDPPFEKPKIDLTLEMEKLNVGLTNTQFDNLMKLGDAMNRQQLGIPYRKYRPYNIPYKGHARDWWHFAITSILEEEVRKPRESWTWGHIKTHRERCNTYAQKYKEQCLSKKPSAVLTETCRLLETELDVFNLLLIRQRVNIEIAKQREAVPEQKSGWFSGWGWGGGAKKDDQTTSQKLVEKFEAAMTSEEKEKMYRAIGYQENAKPTDLPESYEAIRMNFKLIALEVGLYKDERNSSAATKDFHELPSLVLLNFSMATALITQRPAAEAISIIAGMREIKVTGLTRNDYTPLLVESKITDEFNLLEVFFETNPLDKLCDQRVKVVARPLQITYDAPTILALINAFQTPGDVTLSKFEDAASTKISNFKERSATGMQYMIDKKAVLDVDILLMPNILVVPHKGVYDAGNVSLLVVSMGQVHLSSQPRRESNKLQHLFSAGEDKDEILKTVMENAYDRFTVAVDDVQMLVVRAGEPWQNALAEANSTEMHVLRPVSLKVTAALCVVDNDPRLPNIKVDIDLPAILVNVSEDRIFLAIKVATSIPLPEQKEPASRLTQTNSRSSMSISNFINKEVKKIGPSASGSSASKDPLLDEIIQYTSLDVNFSLGEINFVLFQSSRKCETSPDVSIEFLTPDGDVLPSQLTENIQEPIEELPPTPPQQILSIDIRRLEAHFVSKTYESVATVKLGDINLRQYDCQDSDMDVLDVIYTPKQENSSNYLFTVSCTIADKSSPEFSTKYNSTEQLVVANFEVLQIVLHQECLQRIMEVVNNFQRNLDLVLSSTRPRDRMGSIGGGDGIKRTLNVILEDTEEIMTTDQMKRRKKTRRTHVVETVKVRVIANLDQVGLVLTGRKRPIAEMNVKKFVSSLIIKSSYTEVNIGLKDIQVLDLNPYTIHKNILSIVGKDAFNCQIVIYNKEETQDYNSDDMKITVDIGCMKIIFLNWFVAGVMNFLNNFTAAQATISQAGAAAAESARQKAMDAYETATRMKLNIRIKAPIIIVPIGSQDRNALLLDLGLLELTNNTVEVAVAEEERLAVIDEIKLQICDVKISKIVLLDGNESTVDEVDAEVGFLSKFNMMNPMSCTLSITRNLSYTWYRDVPELNLSGRLKSIELTLFADDYALVMLVLNRNLNEGLEEFPPSEEAPQEAQVRPERRNSRAGRLSRTVQVSPIREKIHESIKFNFQFDGVVINLMEGEGAGLARFGIYFLSVKGTKLDNGTLSTSVVLCNIQMDDMRSNSKSQIRQYLSRKDWVQPKLDTDEIIDACYNERNFMVDVTAIIKEDDTFAEVRVRGFDLIVCIDFLLKLTTFLTLPPEENPRESVYIKPAPVSETARDTKHSIRSSAILAAQELVPVESSSHEVPNRKMNLILHIDEPDIILVENLEDLNTSCIIFNAQVHLNYRSINDKQIVNGQIDALKMYMCAFLPERREMTRHYILHPCVISLQGSTPEEEGMHISLKLSDIIINVSPATIELLNKAMLSVSSGTMTKCAIAEESRNYSNLWHQHHFHSRTYWFTKVEQGVDALEAEQRSVSTDNEKQKTEKCVIEIPSITLVIESGVGYYTKPLISLDTRITAVFNNWSRSLTAHGSLTLNMNYYNQALAEWEPIIELNEVIGRNGVREYTPWELKFEMGMEKVQSELEDDAEQQAMHMNIHSAETLEITLSKTCLGLLSELAEAFSQAIDQNGLTKPDIVAPYVLENDTGFDVNLNLRKGIFTLHEVHRGGTPVGANSTLLMVAQSEEVDPSVIKTCTISTGGRAYLQTKDLSTLSEEDSEDYTLYVTIGDINKEIALPVSKSDTRFFNLMRSTSHEPWGIISEVKQEYGTTKVNIHGVVSVHNHFTTGLNIYRRNPAPTAQCFEDIFVGRVRPGEVFHVPLHAIYAESKDLFFSMRGYRRSVQGISWASNPSDLNYSHQLHCDPTNTFEPLIMNARRSKSEVYFENTNKYTLLSAFYTIHLRPPLYLRNSLPINIQVSVAGCSVRKEDGLDAQSSQRFVDRGYRKEDFLDYGEKPVNSGDVLHLPTVRLASKGKESKSFLVVRLVQYLEKDWSCATEIWDYTDDVITWTFSSYDSEMKVDMDLYVKTENRHGSLMLTLFSPFWMINKTGMMLTYKSETTSVEVLYHPPEYSGPILFTFRDKLFFDKKKASIRIDNGQWSEKIPLDVAGSVGEVICFANNQKYPVGVHNHLTQNSLTKQITFIPFYIVCNKCHFDIELQEQSRPADPWLHLEPNEMEPLWPRNDTKNNLVVRVDGKITPAFDFTEVICTLLKLEDSKYGGINVDVQTTEGGVYITFTDYKPADAPGLLINHTGKQIVYHEKGTKNEHILNAKSTIMYAWDDPTGPKMLVFGTNKEETDLKRDGIGEVIMQDGGKVLWVSFLDGLQRVLLFTENESIANRTESTASLQSITQSIDLRIHGIGLSVINNETGLDILYLGVTSSGIIWESKKVTKNRFKELTINENALLEIEYQKYLVHKSVNDVQTYKLDNKFPIDFDLMILKKTVERNLRRSFYPAIWLSRKSSPFQSQLHVKINRIQVDNQFLDPIFPVVLAPIPPPKSVASTTSLKPFIECSMVQRIMPNSTVRQFKYARILIQEFLFKVDLNFLTAIAEMFAKEVSDEAAAKQFRQDVESIELPLSAFFEEHSLEEQKSFYDNLHLGPLKIHVSFSMAGSDTKALPGFLGSLVQGVGVTLTDVNDVVFRLAFFEREYQFFSQKQLINEITSHYTGQALKQLYVLVLGLDVLGNPYGLVVGLKKGVEDLFYEPFQGAIQGPGEFAEGLVLGVKSLFGHTVGGAAGAVSKITGAMGKGLAALTFDEDYQKKRRQGIQNKPKNFHEGLARSSKGLVMGFVDGVTGVVTKPVTGARDNGVEGFFKGLGKGAIGLVARPTAGVVDFASGSFEAVKRAADASEDVKRMRPPRFQHYDFVLRPYCLMEATGNKIMKETDKGKFATTDNFIHCEEIIQKSEYLVVTNYRVMYVQRNEMFGVWTSLWSYLWNEISSVAATARGVQFTVKTDGKKVLGLFSSKESPRKLVLVADERKRDALVDIIESQRSDPNPLRATIAYPAHN", "length": 3321 }, "evidence": [ { "id": "A0A5G2QD22", "url": "https://omabrowser.org/oma/group/A0A5G2QD22/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q07878-1", "protein_name": "Intermembrane lipid transfer protein VPS13", "gene_name": "VPS13", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MLESLAANLLNRLLGSYVENFDPNQLNVGIWSGDVKLKNLKLRKDCLDSLNLPIDVKSGILGDLVLTVPWSSLKNKPVKIIIEDCYLLCSPRSEDHENDEEMIKRAFRLKMRKVSEWELTNQARILSTQSENKTSSSSSEKNNAGFMQSLTTKIIDNLQVTIKNIHLRYEDMDGIFTTGPSSVGLTLNELSAVSTDSNWAPSFIDITQNITHKLLTLNSLCLYWNTDSPPLISDDDQDRSLENFVRGFKDMIASKNSTAPKHQYILKPVSGLGKLSINKLGSTEEQPHIDLQMFYDEFGLELDDTEYNDILHVLSSIQLRQITKKFKKARPSFAVSENPTEWFKYIAACVINEIHEKNKMWTWESMKEKCEQRRLYTKLWVEKLKLKNLEAPLRDPIQEAQLSELHKDLTYDEIILFRSVAKRQYAQYKLGMTEDSPTPTASSNIEPQTSNKSATKNNGSWLSSWWNGKPTEEVDEDLIMTEEQRQELYDAIEFDENEDKGPVLQVPRERVELRVTSLLKKGSFTIRKKKQNLNLGSIIFENCKVDFAQRPDSFLSSFQLNKFSLEDGSPNALYKHIISVRNSSKDQSSIDNHATGEEEEEDEPLLRASFELNPLDGLADSNLNIKLLGMTVFYHVHFITEVHKFFKASNQHMETIGNIVNAAEATVEGWTTQTRMGIESLLEDHKTVNVSLDLQAPLIILPLDPHDWDTPCAIIDAGHMSILSDLVPKEKIKEIKELSPEEYDKIDGNEINRLMFDRFQILSQDTQIFVGPDIQSTIGKINTASSTNDFRILDKMKLELTVDLSILPKAYKLPTIRVFGHLPRLSLSINDIQYKTIMNLIANSIPSMIDDEENNGDYVNYSSGSEKEMKKQIQLQLKNTLKALENMQPLQIEQKFLELHFDIDQAKIAFFQCIKNDSRNSEKLVDILCQRLNFNFDKRAKEMNLDLRVHSLDVEDYIELTDNKEFKNLISSGVEKVTRSQKDLFTLKYKRVQRIVPHNDTLIELFDQDIVMHMSELQLVLTPRSVLTLMNYAMLTFTDPNAPEMPADVLRHNKEDRDDAPQKINMKIKMEAVNVIFNDDSIKLATLVLSAGEFTMVLLPERYNINLKLGGLELTDETNESFSRDSVFRKIIQMKGQELVELSYESFDPATNTKDYDSFLKYSTGSMHVNFIESAVNRMVNFFAKFQKSKVSFDRARLAAYNQAPSIDAVNNMKMDIVIKAPIIQFPKLVGTQENNYDTMRFYLGEFFIENKFSVIDESHKINHIKLGVREGQLSSNLNFDGSSQQLYLVENIGLLFNIDRDPLPQDDTPELKVTSNFESFALDLTENQLTYLLEISNKVSSAFNITDENSGESGGKGEIKSPSPDPASLSSESERTATPQSLQGSNKSNIKNPEQKYLDFSFKAPKIALTLYNKTKGVTSLNDCGLTRIMFQDIGCSLGLKNDGTVDGQAHVAAFRIEDVRNIKDNKHTELIPKSKNKEYQFVANISRKNLEVGRLLNISMTMDSPKMILAMDYLVSLKEFFDAIMSKSHENNLYYPENTNQKPENKAIVESVQEGGDVTKIQYSVNIIETALILLADPCDMNSEAISFKIGQFLVTDQNIMTVAANNVGIFLFKMNSSEEKLRLLDDFSSSLTIDKRNSTPQTLMTNIQLSVQPLLMRISLRDIRLAMLIFKRVTTLLNKMTEKEDNGEEEESTDKIQFSHEFERKLAVLDPSILGERSRASQSSDSESIEVPTAILKNETFNADLGGLRFILIGDVHEMPILDMNVNEITASAKDWSTDFEALASLETYVNIFNYSRSSWEPLLEMIPITFHLSKGHSEMDPAFSFDILTQRIAEITLSARSIAMLSHIPASLTEELPLASRVSQKPYQLVNDTELDFDVWIQDKTTEDNKNEVVLLKANTSLPWEFEDWRSIREKLDIDKSKNILGVCVSGQNYKTIMNIDATTEGENLHVLSPPRNNVHNRIVCEARCDENNVKIITFRSTLVIENTTSTEIELLVDSKDPNKPSLKYAIKPHQSKSVPVEYAYDSDIRIRPASEDIYDWSQQTLSWKSLLSNQMSIFCSSKEDSNQRFHFEIGAKYDEREPLAKIFPHMKIVVSASMTIENLLPADINFSIFDKREEKRTDFLKTGESMEVHHISLDSFLLMSVQPLQDEASASKPSIVNTPHKSPLNPEDSLSLTLSGGQNLLLKLDYKNIDGTRSKVIRIYSPYIIMNSTDRELYIQSSLLNIAQSKILLENEKRYTIPKMFSFDKEDDKSNRARIRFKESEWSSKLSFDAIGQSFDASVRIKNKEQESNLGINISEGKGKYLLSKVIEIAPRYIISNTLDIPIEVCETGSMDVQQIESNITKPLYRMRNIVDKQLVLKFLGGDSNWSQPFFIKNVGVTYLKVLKNSRHKLLKIEILLDKATIFIRIKDGGDRWPFSIRNFSDHDFIFYQRDPRKVSDPYKDDQSNESSSRSFKPIFYRIPSKSIMPYAWDFPTAKEKYLVLESGTRTREVRLAEIGELPPLRLDKRSKDKPAPIVGLHVVADDDMQALVIVNYKANVGLYKLKTASATTTSSVSVNSSVTDGFVQKDEDEKVNTQIVVSFKGVGISLINGRLQELLYINMRGIELRYNESKAYQTFSWKMKWMQIDNQLFSGNYSNILYPTEIPYTEKEIENHPVISGSISKVNDSLQAVPYFKHVTLLIQEFSIQLDEDMLYAMMDFIKFPGSPWIMDSRDYKYDEEIQLPDVSELKTAGDIYFEIFHIQPTVLHLSFIRSDEISPGLAEETEESFSSSLYYVHMFAMTLGNINEAPVKVNSLFMDNVRVPLPILMDHIERHYTTQFVYQIHKILGSADCFGNPVGLFNTISSGVWDLFYEPYQGYMMNDRPQEIGIHLAKGGLSFAKKTVFGLSDSMSKFTGSMAKGLSVTQDLEFQRVRRLQQRINKNNRNALANSAQSFASTLGSGLSGIALDPYKAMQKEGAAGFLKGLGKGIVGLPTKTAIGFLDLTSNLSQGVKSTTTVLDMQKGCRVRLPRYVDHDQIIKPYDLREAQGQYWLKTVNGGVFMNDEYLSHVILPGKELAVIVSMQHIAEVQMATQELMWSTGYPSIQGITLERSGLQIKLKSQSEYFIPISDPEERRSLYRNIAIAVREYNKYCEAIL", "length": 3144 }, "evidence": [ { "id": "A0A5G2QD22", "url": "https://omabrowser.org/oma/group/A0A5G2QD22/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q54LB8-1", "protein_name": "Intermembrane lipid transfer protein vps13A", "gene_name": "vps13A", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVFEGLVSDVLSRVLGEYVKNLNKDQLKIGIFGGSVQLQNLELKEDALANLPINLPITVKKGFLGKLDLKVPWKDLKSKPVIINIDCIYALAVPQTQNYKYDEKEEAKKQAELKKKKLENYEWIKSIKDAEENEISSLQSEKSDSFTDRLVTKIIDNLQIVINKVHIRFENKNDIGKLYALGITLDKLSIQSTDEFWIPSFVDSSKSKFIKKLALMDSLGFYIDDNADSLQNLKLDEFTKAFTSLIPSSASFSLLSKYIIKPISSQLKLNINKSDIIEKSIPKILVECVMSQITCTLSSGQYQNILSILNFTNEYLRDIKYLKFRPIVKVSENPKLWWRYVGQVIVEQIREKRFSRSWEFIAQRRRARLAYIPLFKRNIPKVDWLQPLNKHELEQLNQLEERLSFEDIVYFRSLAYAEIKKETEKNKIRKQFLDSKRQERGFFQNIFNTKKDEDEKAAPKIQLSSEERDELYKTIEYNDVVSASEEPPDWVKIIGNFEIKGFAIQLVEANQVFIEALYTGLSLKFEQRNEGIKVMAGIHLFEVYDQFTKRTHFPKIIASVPTKGTGTFASVIVDTRPPDKNLDLSVELNMDPLNIIVTKPLIMKVVDFFHDPNLDITNISNRAGAHLEDIKEQAKMQLQDAIDNHKVLGLAVNIHAPVIFIPEDVINERSNILIVDLGKLVVRSDTSAFVKGSNKLAGSTSEIDLYDKFNVSFESIQVLLSDDLKSAISTGDKKPPTIGGVNDKQGHPLKHHNSIIKKFDIQLKIFSSIQQNNLTMTKLKIKGELPKFDFYLSDKKFKQLLTILNAITADIPVTSGKPKATITPINDSNSPSSVSPKLISTSPHSFSSSSAPVDVNSSNDLKKSKENIELLLNAKLVEAEFEIKSISLTLSNNQSDLIRVVFSDINVGFQQRTFDMSGTFKLSSLEIEDCFTKNTLNKLATSNPPHADRSLGKDSLVQMHFKQIQTASPEFNKIDMSIDLKIHSFYLVINPSTIYQLLKLAKSLQKDPENIDQISKAYPRLLSRNKVVPINSSEGGGTAATSPNAHLSSPNQQSPNQQSPNQQSPQIVSRKIITGTGSNSKPVGPDEKVVSSKTASGTTTRRVIIRSVRHVPKKKGPTEFVSMKFSVHINSLGLALNQDNNELLGIFTINNVSTDVSMFKDNRMLVQGRLGSIILDDLTPTISNYKQIIIPKNTSGDMLDFKYETFSMTLSNYAGYDASVNANVKSILFNANVGFLIHLQNYFLGGMLDPILKQDDSNNNNKSIEKSKSIDSKLNEQQSSSSSTSTPRSDDNHEKSERELDLEKNKKLLTSLQQNTNKHIPKMKLDIVVETPVLVIPQATRSKNSLIMELGKIIISNGWQYHDKTMAPMENMKIHLQDANITILSDNRSSYFLEKLTIDLGISKFLVPNTDPEVEDQTIDLSISHFAFYLDENQYRFFLGLSQNVQKELDLANKEVQEIKKLSNMGDPFEMGRITSNDMQYFTEQEVIQKMGKVLLRIHLVLDYVSFKISSLDAQGEIAHFIVRGIDVDVKNTDKNKTNIQLSMKSILLSDTRSNSTNIFKNLLENKVNTESVAPFLQVGYIRDNLLGDQYINVNINNTCLFLSPTPLLMISEFFMVPLSEQHDTNNMDVDLDLDLESLESELNSLMDPSIEKDDNDLQQQQQQSSSSSFIPSQQQQQQKVRSQSIIGQNRSRTSSIGGKESKTISSSISNNSLSSYPQEAGMEDEEEKEIFRSPTITFTATLVPSVTLVEDETLSTTRCLMLKTRVGVQFRRDPHGIENATVVIENTKVNIYKPSSTESENQGSRPIQILKPIEMITIKYIKENLTSTEWKQDIGISCTAMKVFFSYDDVKAILKILNNITTNLQKQQEQQKKRQLSFDNMASSSTSLPSLNKSTNSFQTSTSGNSNSGKKDEELFTNNEKLRFSCPNVSVLFINESPEMYIPIIELFFADIEASAMNWSTDLESKASMSIKGDYFNETNMKFEPVIEDWSFSVDLKKNRTGKIKGSFLATRELLNINVSHSLLQTISSAMIHVEKIDQMDAANLSSSLNASNLTTSTGSNNSSTSGSGLVQSFNGPSVLNKYLPGGEKNDSKISFHSHWISNQTGVTLEYHIPKVDSEMFQLTESSEPVSLPMKISKSRDATMGEHLNIELFIQGSKISNLSMDAVGYRIYRIGSTNEFITCEVRLRPDGSKCCYIKSMDQFENNTSLNLELKCQENGSPFSIAKHSKFSLPILVSKDLCKFWIKLENSPYWSDPIDIYKLPDHENSKLFKLQTVDKVGMFVSLVHKTIANRNCDRFNNTFKFFPPIQIENILPYPFKLSIPGTTIDKVNMGSGEKIDCHYYQPGSNLVAIVSELENFPETKHTLVSGDATSPTFTKTFKLQQNNREISLDIERTELIKGVRTLSFYCQYWLVNNSLLPIEVKLSDNQVLLVPPNLPDQLPRPPVLYSNNTIRARIPLQAEQPMNKSFCEKFPISAVGNPNTIFLTNPTRTYELSYKVDFCPNERFRLSKTVTFVPKNVICNDLPFPILVAQCVSTIDGIDKMALNFSGSGLSSSSGSNGKGVSNPVRLLGELRLDPGEYKPFHWEENVENKKISIRPITNEKNPQEWRWSGGFFVDSISDYVVKSRNTERPDHDSLLFHVNIKEKQGTHFIRIPLSSKESPPYIIQNDTQFKISFFQRDSPENIDYIEPKEKLCYGWDEPSAEYVLSVAVEGKTLKKRINVNKIKGYKLQHERTDLYITITIDGPSRVLLFSTNEKKFRSIKAWTDNKAVNLSQSQSEYHFNIRCSGIGCSIIDKTPKELAYISMKDFLIIATQSSIENTVEVKLAELQIDNQLIKTDFPVLIHTVSPDKEHRKDFLHAVIIKSTIDNIDYFRYFSTLIQEMTIELEDHWIKEVLDFVDSIPSFGRGNNASNNNNNNGMTSSQMRQSGSGLDSLTSTLYNAVSIEPPTSDSSTIKMVYFALLVLNPIKINLTLALQNDGLIKSNHKILSLVEGLGLSLTRLDRAPITLQGLLMEHPFTSRSTIIDKIKTSYIQQALRQFYNILGSVDFLGNPVGLFRNFGTGVHDFFVEPAQGLVKSPADFTKGLAKGTSSFVKNSVFGTFNTLSKLTGTLGTGVATLSFDEKYLQERKLHQARKPSHVGEGLAMGGIGLGRGILQGITGIVTKPVEGAKKGGFAGFAKGLAQGVVGVAVKPTTAVIDLATKTTEGIKNTTNLQSQAERVRPPRCFSHDNVLRPFDEVESEGWFLLKTAHKGKHASDSYIWHHIINQECTIIISDHRIILSKSKKNFLHSSFLFQIPFKFIKSNEMVDDGVLLEFDPPQNLGLLDRDVKSKVIPVDDPNVNMLLNMKLSHALKKFHDNNPNLSNSSSIKY", "length": 3373 }, "evidence": [ { "id": "A0A5G2QD22", "url": "https://omabrowser.org/oma/group/A0A5G2QD22/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q709C8-1", "protein_name": "Intermembrane lipid transfer protein VPS13C", "gene_name": "VPS13C", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVLESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENALSELDVPFKVKAGQIDKLTLKIPWKNLYGEAVVATLEGLYLLVVPGASIKYDAVKEEKSLQDVKQKELSRIEEALQKAAEKGTHSGEFIYGLENFVYKDIKPGRKRKKHKKHFKKPFKGLDRSKDKPKEAKKDTFVEKLATQVIKNVQVKITDIHIKYEDDVTDPKRPLSFGVTLGELSLLTANEHWTPCILNEADKIIYKLIRLDSLSAYWNVNCSMSYQRSREQILDQLKNEILTSGNIPPNYQYIFQPISASAKLYMNPYAESELKTPKLDCNIEIQNIAIELTKPQYLSMIDLLESVDYMVRNAPYRKYKPYLPLHTNGRRWWKYAIDSVLEVHIRRYTQMWSWSNIKKHRQLLKSYKIAYKNKLTQSKVSEEIQKEIQDLEKTLDVFNIILARQQAQVEVIRSGQKLRKKSADTGEKRGGWFSGLWGKKESKKKDEESLIPETIDDLMTPEEKDKLFTAIGYSESTHNLTLPKQYVAHIMTLKLVSTSVTIRENKNIPEILKIQIIGLGTQVSQRPGAQALKVEAKLEHWYITGLRQQDIVPSLVASIGDTTSSLLKIKFETNPEDSPADQTLIVQSQPVEVIYDAKTVNAVVEFFQSNKGLDLEQITSATLMKLEEIKERTATGLTHIIETRKVLDLRINLKPSYLVVPQTGFHHEKSDLLILDFGTFQLNSKDQGLQKTTNSSLEEIMDKAYDKFDVEIKNVQLLFARAEETWKKCRFQHPSTMHILQPMDIHVELAKAMVEKDIRMARFKVSGGLPLMHVRISDQKMKDVLYLMNSIPLPQKSSAQSPERQVSSIPIISGGTKGLLGTSLLLDTVESESDDEYFDAEDGEPQTCKSMKGSELKKAAEVPNEELINLLLKFEIKEVILEFTKQQKEEDTILVFNVTQLGTEATMRTFDLTVVSYLKKISLDYHEIEGSKRKPLHLISSSDKPGLDLLKVEYIKADKNGPSFQTAFGKTEQTVKVAFSSLNLLLQTQALVASINYLTTIIPSDDQSISVAKEVQISTEKQQKNSTLPKAIVSSRDSDIIDFRLFAKLNAFCVIVCNEKNNIAEIKIQGLDSSLSLQSRKQSLFARLENIIVTDVDPKTVHKKAVSIMGNEVFRFNLDLYPDATEGDLYTDMSKVDGVLSLNVGCIQIVYLHKFLMSLLNFLNNFQTAKESLSAATAQAAERAATSVKDLAQRSFRVSINIDLKAPVIVIPQSSISTNAVVVDLGLIRVHNQFSLVSDEDYLNPPVIDRMDVQLTKLTLYRTVIQPGIYHPDIQLLHPINLEFLVNRNLAASWYHKVPVVEIKGHLDSMNVSLNQEDLNLLFRILTENLCEGTEDLDKVKPRVQETGEIKEPLEISISQDVHDSKNTLTTGVEEIRSVDIINMLLNFEIKEVVVTLMKKSEKKGRPLHELNVLQLGMEAKVKTYDMTAKAYLKKISMQCFDFTDSKGEPLHIINSSNVTDEPLLKMLLTKADSDGPEFKTIHDSTKQRLKVSFASLDLVLHLEALLSFMDFLSSAAPFSEPSSSEKESELKPLVGESRSIAVKAVSSNISQKDVFDLKITAELNAFNVFVCDQKCNIADIKIHGMDASISVKPKQTDVFARLKDIIVMNVDLQSIHKKAVSILGDEVFRFQLTLYPDATEGEAYADMSKVDGKLSFKVGCIQIVYVHKFFMSLLNFLNNFQTAKEALSTATVQAAERAASSMKDLAQKSFRLLMDINLKAPVIIIPQSSVSPNAVIADLGLIRVENKFSLVPMEHYSLPPVIDKMNIELTQLKLSRTILQASLPQNDIEILKPVNMLLSIQRNLAAAWYVQIPGMEIKGKLKPMQVALSEDDLTVLMKILLENLGEASSQPSPTQSVQETVRVRKVDVSSVPDHLKEQEDWTDSKLSMNQIVSLQFDFHFESLSIILYNNDINQESGVAFHNDSFQLGELRLHLMASSGKMFKDGSMNVSVKLKTCTLDDLREGIERATSRMIDRKNDQDNNSSMIDISYKQDKNGSQIDAVLDKLYVCASVEFLMTVADFFIKAVPQSPENVAKETQILPRQTATGKVKIEKDDSVRPNMTLKAMITDPEVVFVASLTKADAPALTASFQCNLSLSTSKLEQMMEASVRDLKVLACPFLREKRGKNITTVLQPCSLFMEKCTWASGKQNINIMVKEFIIKISPIILNTVLTIMAALSPKTKEDGSKDTSKEMENLWGIKSINDYNTWFLGVDTATEITESFKGIEHSLIEENCGVVVESIQVTLECGLGHRTVPLLLAESKFSGNIKNWTSLMAAVADVTLQVHYYNEIHAVWEPLIERVEGKRQWNLRLDVKKNPVQDKSLLPGDDFIPEPQMAIHISSGNTMNITISKSCLNVFNNLAKGFSEGTASTFDYSLKDRAPFTVKNAVGVPIKVKPNCNLRVMGFPEKSDIFDVDAGQNLELEYASMVPSSQGNLSILSRQESSFFTLTIVPHGYTEVANIPVARPGRRLYNVRNPNASHSDSVLVQIDATEGNKVITLRSPLQIKNHFSIAFIIYKFVKNVKLLERIGIARPEEEFHVPLDSYRCQLFIQPAGILEHQYKESTTYISWKEELHRSREVRCMLQCPSVEVSFLPLIVNTVALPDELSYICTHGEDWDVAYIIHLYPSLTLRNLLPYSLRYLLEGTAETHELAEGSTADVLHSRISGEIMELVLVKYQGKNWNGHFRIRDTLPEFFPVCFSSDSTEVTTVDLSVHVRRIGSRMVLSVFSPYWLINKTTRVLQYRSEDIHVKHPADFRDIILFSFKKKNIFTKNKVQLKISTSAWSSSFSLDTVGSYGCVKCPANNMEYLVGVSIKMSSFNLSRIVTLTPFCTIANKSSLELEVGEIASDGSMPTNKWNYIASSECLPFWPESLSGKLCVRVVGCEGSSKPFFYNRQDNGTLLSLEDLNGGILVDVNTAEHSTVITFSDYHEGSAPALIMNHTPWDILTYKQSGSPEEMVLLPRQARLFAWADPTGTRKLTWTYAANVGEHDLLKDGCGQFPYDANIQIHWVSFLDGRQRVLLFTDDVALVSKALQAEEMEQADYEITLSLHSLGLSLVNNESKQEVSYIGITSSGVVWEVKPKQKWKPFSQKQIILLEQSYQKHQISRDHGWIKLDNNFEVNFDKDPMEMRLPIRSPIKRDFLSGIQIEFKQSSHQRSLRARLYWLQVDNQLPGAMFPVVFHPVAPPKSIALDSEPKPFIDVSVITRFNEYSKVLQFKYFMVLIQEMALKIDQGFLGAIIALFTPTTDPEAERRRTKLIQQDIDALNAELMETSMTDMSILSFFEHFHISPVKLHLSLSLGSGGEESDKEKQEMFAVHSVNLLLKSIGATLTDVDDLIFKLAYYEIRYQFYKRDQLIWSVVRHYSEQFLKQMYVLVLGLDVLGNPFGLIRGLSEGVEALFYEPFQGAVQGPEEFAEGLVIGVRSLFGHTVGGAAGVVSRITGSVGKGLAAITMDKEYQQKRREELSRQPRDFGDSLARGGKGFLRGVVGGVTGIITKPVEGAKKEGAAGFFKGIGKGLVGAVARPTGGIVDMASSTFQGIQRAAESTEEVSSLRPPRLIHEDGIIRPYDRQESEGSDLLENHIKKLEGETYRYHCAIPGSKKTILMVTNRRVLCIKEVEILGLMCVDWQCPFEDFVFPPSVSENVLKISVKEQGLFHKKDSANQGCVRKVYLKDTATAERACNAIEDAQSTRQQQKLMKQSSVRLLRPQLPS", "length": 3753 }, "evidence": [ { "id": "A0A5G2QD22", "url": "https://omabrowser.org/oma/group/A0A5G2QD22/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8BX70-1", "protein_name": "Intermembrane lipid transfer protein VPS13C", "gene_name": "Vps13c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENALSELDVPFKVKAGQIDKLTLKIPWKNLYGEAVVATLEGLYLLVVPGASIKYDAEKEEKSLQDIKQKELCRIEEALQKAAEKGAHSGEFMYGLENLLYKDVKPGRKRKKHKKHFKKRFKGLDRSKDKPKEAKKDTFLEKLATQVIKNVQVKITDIHIKYEDDITDPERPLSFGVTLREFSLLTTNEHWTPCILNEAEKIIYKLVKLDSLSAYWNVGCCMSYRGSREHILEQLKREILTSTNIPPDHQYIFQPISASAKLYMNPGAESELKTPKLDGNVEVQNIAIELTKPQYLSMIDFLESLDYMVRNAPYRKYKPCLPLHTNCRQWWKYAIDSVLEVHIRRYTQPWSWSNIKNHRQLLKSYKMAYKTKLTQAKVSEEIQKQIQDLEKSLDVFNIILVRQQAQVEVIHSGQKLRKKSAEAGEKRGWFSGFWGKKESKKRDEESSVPETIDDLMTPEEKDKLFTAIGYSENAYNLALPKQYVAHILTLKLVSTSIIIRENRNVPEILRVQIIGLGTQVSQRPGAQALKIEAKLEHWYVTGLRQQDIVPSLVASIGDTTSSLLKIEFETNPENSPADQTLIVQSQPVEVIYDAKTINAVVEFFQSNKGLDLEQITSATLMKLEEIKERTATGLTHIIETRKVLDLRINLKPSYLIIPQTGFHHEKSNLLILDFGTFQLNSKDQGAQKTANASLEEIIDKAYDKFDVEIRSVQLLFAKAEENWKKCRFQHPSTMHILQPMDIHVELAKAMVEKDVRMAKFKVSGGLPLMHVRISDQKIKDALCLINSIPLPQKSSTPSPERQVASIPVLSGGTKALLGTSLLLDGVESESDEEFFDAEDGDSQAARTVKASELKKAAEVPNEELVSLLLKFEIKEVVLELTKQQKEEETILVFNVTQLGTEATMRTFDLTAVSYLRKISLDYHDIKGSRKKPIHLISSSDRPGLDLLKVEYIKVDRNGPSFQTTFEKTEQTVKVAFSSLNLLLQTQALLSSLNYLTTVIPSDSQNTGVAKEVQAMPEKQKNSPLQKVMVPSRDSDVIGFRLFAKLNAFCVTVCDEKSNIAEIKIQGLDSSLSLQSKKQSLFARLENIIVTDVDPKTIHKKAVSIVGNEVFRFNLDLYPDATEGDSYTDMSTVDGVVALHVGCIQIVYLHKFLMSLLSFLNNFQVAKEALSAATAQAAEKAATSVKDLAQRSFRVSVDIDLKAPVIVIPQSSLSTNAVVVDLGLIRVHNRFSLVSGEDTANPPVIDKMEVQLTKLKLSRTAIQPGTSHPDIQLLHPINLEFFVSRNLAANWYHKVPVVEIKGRLDSMNVSLNQEDLNLLFRILAENLGEATEDLDKGKPRIQERGETKACREVSTPQDVHTTQGVPAARVEETRPVDIINVLLNFEIKEVVVTLMKKAERKGSPFHELKILHLGMEAKVKAHDMTAAAYLRNISMRCFHFPDSKGEPLRIVNTSDVSDGILLKLLFIKADSDGPDFKTIHDNTKQKLKVSFSSLDLVLHLEALLSLMDFLSSAIPSSDSSSSEKEPELKPLVGESRSLAIRAVPSSYEGDAFDLKITAELNAFNIFICDQKSNIAEIKIHGMDASISVKPKQTDVFARLKNIIVMNVDSLSIHKKAVSILGDEVFRFQMSLYPDATEGENYGDMSKVDGRLSLKVGCIQIVYVHKFFMSLLSFLNNFQAAKEALSTATVQAAERAASSVKDLAQKSFRLLMDIDLKAPVITIPQSSVSPNVVIADLGLIRVENKFSLVSVEQLALPPVADEMSIQLTQLKLARTVLQADSPQHDVEILKPVNMLLCIQRNLSAAWYTQIPGMEIKGELKPMQVALSQDDLTVLMKILLENLGEASSQPSPTQYAQEAARVKRDTRSGPDYLKEQELADPKPPGDQTVTLQFDFHFDSLSIILYNSDSSQEPRLSFHNDSFRLGELTLHLMASAGKMFKDGSMNVSLKLKTCTLDDLREGIERATSRMIDKKNDQDNNSSMIDISYSQDKNGSQVDAVLDKLYVCASVEFLMTVADFFIKAMPQSPENIAKEIQIPSRQTAAGRVKMEKDDSVRPNMTLKAMITDPEVVFVASLTKADAPALTASFQCNLSLSTSKLEQMMEASVRDLKVLACPFLRERRGKSITTVLQPCSLFMEKCTWASGKQNINIVVKEFVIKISPIILNTVMTIMAAMSPKTKEDEWKDTPKETDNLWAVKSITDYNSWFLGVDMATEVTENFRDSEHPSIEENCVVAVESVQVTLECGLGHRTVPLLLAESKFSGNIKNWTSLMAAAADMTLEVHYYNETHAVWEPLIERVEGNKPWSLKLNVKKNPIQDKSLMPGDDFIPEPQTAVHISSGATMNITISKSCLNVFSNLAKGFSEGAASTFDYSLKDRAPFTVKNALGVPMKVQPNRNLKVMGSPEKSDIYDVGAGQHLELDYASLEPSRQGKLSILSRQESSLFTLTFVPYGYTEVASVPVARPGRRLYNVRNPSASHSDSVLVQIDATEGNKVVTLRSPLQIKNHFSIAFIIYKFVKNVKLLERIGIARPEEEFHVPLDSYRCQLYVQPAGGLEQQYTHSSTYISWKEELHRSREVRCMLQCPAVEVSFLPLIVNTVALPDELSYIGAHGEDWDPAYVIHLYPPLTLRNLLPYSLRYLLEGTAETHELAEGSSADVLHSRISGEIIELVLVKYLGKNWNGHFRICDTLPEFFLVCFSSDTAEVMTVDLSVHVRRIGCRMELSVFSPYWLINKTSRVLQYRSEEIHVKHPADFRDIILFSFKKKNIFSKNKVQLKISTSAWSNGFSLDTVGSYGCVKCPATNMEYLVGVSIKMSSFNLSRVVTLTPFCTVANKSSLDLEVGEIASDGSIPTNKWHYVASSECIPFWPENLSGKLCVRVVGYEGSSKPFFYNRQDNGTLLSLEDLNGGILVDINTAEHSTVITFSDYHEGSAPALIMNHTQWDVLTYKQSGSQEELVLLPGETRLFAWADPTGIRKLTWNYAANFGEHDLLKDECGQFPYDANIQIHWVSFLDGRQRVLLFTDDVALVSKALQAEEMEQADHEVALSLHSLGLSLVNNENKQEVSYVGITSSGVVWEMKPKQKWKPFSQKQIMSLEQAYSKRLASQDRGWVKLDSNFEVNFDKVPMEMRLPIRCPIKRDFLSGIQVEFKQSPHQRSLRARLYWLQVDNQLPGTMFPVVFHPVAPPKSIALDSEPKPFIDVSVITRFNEYSKVLQFKYFMVLIQEMALKVDQGFLGAVISLFTPTTDPEAERKRTKLIQQDIDALNTELMESSMTDMSILSFFEHFHISPVKLHLSLSLGSGGEESDKEKQEMIAIHSVNLLLKSIGATLTDVDDLIFKLAYYEIRYQFYKRDQLMWSVVRHYSEQFLKQMYVLVLGLDVLGNPFGLIRGLSEGVEALFYEPFQGAVQGPEEFAEGLVIGVRSLVGHTVGGAAGVVSRITGSVGKGLAAITMDKEYQQKRREEMGRQPKDFGDSLARGGKGFLRGVVGGVTGIITKPVEGAKKEGAAGFFKGIGKGLVGAVARPTGGIIDMASSTFQGIQRVAESTEEVSSLRPPRLIHEDGIIRPYDRQESEGSDLLENHIKKLEGEAYQFHCAVPGNKRAVLMITNRRALFIKEVEILGHMSVDWQCLFEDFVCPPEVSENLLKISVKEQGLFHKKDSANIGHLRKIYLKDPITAKRAFDAIESAQSARQQQKLMRQSSVKLLRPQGPS", "length": 3748 }, "evidence": [ { "id": "A0A5G2QD22", "url": "https://omabrowser.org/oma/group/A0A5G2QD22/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "lipid transport", "id": "GO:0006869", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006869", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD22", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD22" } ], "pmid": "" }, { "name": "protein retention in Golgi apparatus", "id": "GO:0045053", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045053", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD22", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD22" } ], "pmid": "" }, { "name": "mitochondrion organization", "id": "GO:0007005", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007005", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD22", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD22" } ], "pmid": "" }, { "name": "negative regulation of type 2 mitophagy", "id": "GO:1905090", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905090", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD22", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD22" } ], "pmid": "" }, { "name": "protein targeting to vacuole", "id": "GO:0006623", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006623", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD22", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD22" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 7, "go_terms": [ { "name": "mitochondrial outer membrane", "id": "GO:0005741", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005741", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD22", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD22" } ], "pmid": "" }, { "name": "lipid droplet", "id": "GO:0005811", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005811", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD22", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD22" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD22", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD22" } ], "pmid": "" }, { "name": "lysosome", "id": "GO:0005764", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005764", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD22", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD22" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD22", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD22" } ], "pmid": "" }, { "name": "dense core granule membrane", "id": "GO:0032127", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032127", "evidence": [ { "database": 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"https://www.uniprot.org/uniprotkb/A0A287B4X1/entry", "sequence": { "sequence": "MAGPAPPAADELPGPARRLYSRMEASCLELALEGERLCKAGDFKAGVAFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLKEYARALEYHKHDLLLARTIGDRMGEAKASGNLGNTLKVLGRFDEAVVCCQRHLDIAQEQGDKVGEARALYNMGNVYHAKGKQLSWSSAQDPGHLPPAIRETLRRASEFYERNLSLVKQLGDRAAQGRACGNLGNTHYLLGSFVEATAFHKERLAIAKEFGDKAAERRAYSNLGNAHIFLGRFDVAAEYYKKTLQLSRQLKDQAVEAQACYSLGNTYTLLQDHERAAEYHLRHLLIAQELADRVGEGRACWSLGNAYVSMGSPAQALTFAKKHLEISQEIGDRSGELTARMNVAQLQLALGRLSSPAAAEKPDLAGYEAQGARPKRTQRLSAETWDLLRLPLEREQNGDSHHAGDWRGPGRDLLPLPVRSRKYQEGPDAAERRPREGGHSPLDSADVRVQVPRTGIPRASSSDEECFFDLLSKFQSSRMDDQRCPLEEGQPAAAAEATASPSLEERIAQPSLKASPQTEELFDLIASSQSRRLDDQRASVGSLPGLRITHNNLGHLRGDGDLQEPGDEFFNMLIKCQSSRIDDQRCPPPDVLPRGPTMPDEDFFSLIQRVQAKRMDEQRVDLAGSPEPEAGGPPEPRQQCQPGAS", "length": 673, "header": "tr|A0A287B4X1-1|A0A287B4X1_PIG Computationally mapped isoform of G-protein-signaling modulator 1 OS=Sus scrofa OX=9823 GN=GPSM1 PE=3 SV=1 CANONICAL=A0A5G2QBN4-1" }, "locus": { "chromosome": "AEMK02000682.1", "start_pos": 1383157, "end_pos": 1357353, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043385.3", "url": "https://www.ensembl.org/id/ENSSSCT00000043385.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051143.1", "url": "https://www.ensembl.org/id/ENSSSCP00000051143.1" } ] } }, { "isoform_ac": "A0A5G2QBN4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBN4/entry", "sequence": { "sequence": "MTCPRAGVFCSQGHQSLQPTTQVGKQGTLRPAHPQDQQPARGEGWLTGREPQSPAMPAAAAAEGQPVALSLAERAVCTVVYGAPRPRPLLLPVGLELWLYVQKMRNLQRKRMEASCLELALEGERLCKAGDFKAGVAFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLKEYARALEYHKHDLLLARTIGDRMGEAKASGNLGNTLKVLGRFDEAVVCCQRHLDIAQEQGDKVGEARALYNMGNVYHAKGKQLSWSSAQDPGHLPPAIRETLRRASEFYERNLSLVKQLGDRAAQGRACGNLGNTHYLLGSFVEATAFHKERLAIAKEFGDKAAERRAYSNLGNAHIFLGRFDVAAEYYKKTLQLSRQLKDQAVEAQACYSLGNTYTLLQDHERAAEYHLRHLLIAQELADRVGEGRACWSLGNAYVSMGSPAQALTFAKKHLEISQEIGDRSGELTARMNVAQLQLALGRLSSPAAAEKPDLAGYEAQGARPKRTQRLSAETWDLLRLPLEREQNGDSHHAGDWRGPGRDLLPLPVRSRKYQEGPDAAERRPREGGHSPLDSADVRVQVPRTGIPRASSSDEECFFDLLSKFQSSRMDDQRCPLEEGQPAAAAEATASPSLEERIAQPSLKASPQTEELFDLIASSQSRRLDDQRASVGSLPGLRITHNNLGHLRGDGDLQEPGDEFFNMLIKCQSSRIDDQRCPPPDVLPRGPTMPDEDFFSLIQRVQAKRMDEQRVDLAGSPEPEAGGPPEPRQQCQPGAS", "length": 762, "header": "tr|A0A5G2QBN4-1|A0A5G2QBN4_PIG Isoform 1 of G-protein-signaling modulator 1 OS=Sus scrofa OX=9823 GN=GPSM1 PE=3 SV=2 CANONICAL=A0A5G2QBN4-1" }, "locus": { "chromosome": "AEMK02000682.1", "start_pos": 1378903, "end_pos": 1357353, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090863.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090863.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060903.2", "url": "https://www.ensembl.org/id/ENSSSCP00000060903.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBN4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBN4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:110258076", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110258076", "resource": "KEGG Pathway" }, { "id": "R-SSC-418594", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-418594", "resource": "Reactome", "description": "G alpha (i) signalling events" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1MKT3-1", "protein_name": "G-protein-signaling modulator 1", "gene_name": "GPSM1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPAAAPEGPPAALSLAEKAVCKVVYGAPRPRPLLLPVGLELWLYVQKMRDLRGKRMEASCLELALEGERLCKAGDFKAGVAFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLKEYARALEYHKHDLLLARTIGDRMGEAKASGNLGNTLKVLGRFDEAVVCCQRHLDIAQEQGDKVGEARALYNIGNVYHAKGKQLSWTAAQDPGHLPPAVRETLRRASEFYERNLSLVKELGDRAAQGRAYGNLGNTHYLLGSFAEATAFHKERLAIAKEFGDKAAERRAYSNLGNAHIFLGRFDVAAEYYKKTLQLSRQLKDQAVEAQACYSLGNTYTLLQDYERAAEYHLRHLLIAQELADRVGEGRACWSLGNAYVSMGSPAQALTFAKKHLEISQEIGDRSGELTARMNVAQLQLALGRLASPAAAEKPDLAGYEAQGARPKRTQRLSAETWDLLRLPLEREQNGDSHHAGDWRGPSRDLLPLPVRSRKYQEGPDAAERRPREGSHSPLDSADVRVQLPRTGIPRAPSPDEECFFDLLSKFQSSRMDDQRCPLEDGQPAAAEATATPALEGRVAQPSLTASPQTEEFFDLIASSQSRRLDDQRASVGSLPGLRITHNNLGHLRGDGEPQEPGDEFFNMLIKCQSSRIDDQRCPPPDVPPRGPTMPDEDFFSLIQRVQAKRMDEQRVDLAGSPEQEVGGPPESRQQCQPGAS", "length": 705 }, "evidence": [ { "id": "A0A5G2QBN4", "url": "https://omabrowser.org/oma/group/A0A5G2QBN4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q6IR34-1", "protein_name": "G protein-signaling modulator 1", "gene_name": "Gpsm1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASPAPPVAEELPGPASRRLYSRMEASCLELALEGERLCKAGDFKAGVAFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLKEYARALQFHKHDLLLARTIGDRMGEAKASGNLGNTLKVLGRFDEAIVCCQRHLDIAQEQGDKVGEARALYNIGNVYHAKGKQLSWNAAQDPGHLPPDVRETLHRASEFYERNLSLVKELGDRAAQGRAYGNLGNTHYLLGNFTEATTFHKERLAIAKEFGDKAAERRAYSNLGNAHIFLGRFDVAAEHYKKTLQLSRQLRDQAVEAQACYSLGNTYTLLQDYERAAEYHLRHLVIAQELADRVGEGRACWSLGNAYVSMGSPAQALTFAKKHLQISQEIGDRNGELTARMNIAHLQLALGRLTSPAAAEKPDLAGYEAQGARPKRTQRLSAETWDLLRLPLDREQNGETHHTGDWRGPGRDSLPLPMRSRKYQEGPDAIERRPREGSHSPLDSADVRVQVPRTGIPRAPSSDEECFFDLLSKFQSSRMDDQRCPLEEGQAGAAEATAAPSVEDRAAQSSVTASPQTEEFFDLIASSQSRRLDDQRASVGSLPGLRITLNNVGHLRGDGDAQEPGDEFFNMLIKYQSSRIDDQRCPPPDVLPRGPTMPDEDFFSLIQRVQAKRMDEQRVDLAGSPEQEASGLPDPQQQCPPGAS", "length": 673 }, "evidence": [ { "id": "A0A5G2QBN4", "url": "https://omabrowser.org/oma/group/A0A5G2QBN4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q86YR5-1", "protein_name": "G protein-signaling modulator 1", "gene_name": "GPSM1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAGPAPPVADELPGPAARRLYSRMEASCLELALEGERLCKAGDFKTGVAFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLKEHGRALEYHKHDLLLARTIGDRMGEAKASGNLGNTLKVLGRFDEAAVCCQRHLSIAQEQGDKVGEARALYNIGNVYHAKGKQLSWNAANATQDPGHLPPDVRETLCKASEFYERNLSLVKELGDRAAQGRAYGNLGNTHYLLGNFTEATTFHKERLAIAKEFGDKAAERRAYSNLGNAHVFLGRFDVAAEYYKKTLQLSRQLRDQAVEAQACYSLGNTYTLLQDYERAAEYHLRHLLIAQELADRVGEGRACWSLGNAYVSMGRPAQALTFAKKHLQISQEIGDRHGELTARMNVAQLQLVLGRLTSPAASEKPDLAGYEAQGARPKRTQRLSAETWDLLRLPLEREQNGDSHHSGDWRGPSRDSLPLPVRSRKYQEGPDAERRPREGSHSPLDSADVRVHVPRTSIPRAPSSDEECFFDLLTKFQSSRMDDQRCPLDDGQAGAAEATAAPTLEDRIAQPSMTASPQTEEFFDLIASSQSRRLDDQRASVGSLPGLRITHSNAGHLRGHGEPQEPGDDFFNMLIKYQSSRIDDQRCPPPDVLPRGPTMPDEDFFSLIQRVQAKRMDEQRVDLAGGPEQGAGGPPEPQQQCQPGAS", "length": 675 }, "evidence": [ { "id": "A0A5G2QBN4", "url": "https://omabrowser.org/oma/group/A0A5G2QBN4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9R080-1", "protein_name": "G protein-signaling modulator 1", "gene_name": "Gpsm1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASPAPPAAEELPGPAARRLYSRMEASCLELALEGERLCKAGDFKAGVAFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLKEYARALQFHKHDLLLARTIGDRMGEAKASGNLGNTLKVLGRFDEAIVCCQRHLDIAQEQGDKVGEARALYNIGNVYHAKGKQLSWNAAQDPGHLPPDVRETLHRASEFYERNLSLVKELGDRAAQGRAYGNLGNTHYLLGNFTEATTFHKERLAIAKEFGDKAAERRAYSNLGNAHIFLGRFDVAAEHYKKTLQLSRQIRDQAVEAQACYSLGNTYTLLQDYERAAEYHLRHLVIAQELADRVGEGRACWSLGNAYVSMGSPAQALTFAKKHLQISQEIGDRNGELTARMNIAHLQLALGRLTSPAAAEKPDLAGYEAQGARPKRTQRLSAETWDLLRLPLDREQNGETHHTGDWRGPSRDSLPLPMRSRKYQEGPDAIERRPREGSHSPLDSADVRVQVPRTGIPRAPSSDEECFFDLLSKFQSSRMDDQRCPLEEGQAGAAEATAAPTLEERAAQPSVTASPQTEEFFDLIASSQSRRLDDQRASVGSLPGLRITLNNVGHLRGDGDPQEPGDEFFNMLIKYQSSRIDDQRCPPPDVLPRGPTMPDEDFFSLIQRVQAKRMDEQRVDLAGSPDQEASGLPDPRQQCPPGAS", "length": 673 }, "evidence": [ { "id": "A0A5G2QBN4", "url": "https://omabrowser.org/oma/group/A0A5G2QBN4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBN4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBN4" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBN4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBN4" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBN4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBN4" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBN4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBN4" } ], "pmid": "" }, { "name": "cell cortex", "id": "GO:0005938", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005938", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBN4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBN4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "nervous system development", "id": "GO:0007399", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007399", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBN4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBN4" } ], "pmid": "" }, { "name": "cell differentiation", "id": "GO:0030154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030154", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBN4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBN4" } ], "pmid": "" }, { "name": "establishment of mitotic spindle orientation", "id": "GO:0000132", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000132", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBN4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBN4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "GTPase regulator activity", "id": "GO:0030695", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030695", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBN4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBN4" } ], "pmid": "" }, { "name": "G-protein alpha-subunit binding", "id": "GO:0001965", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001965", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBN4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBN4" } ], "pmid": "" }, { "name": "GDP-dissociation inhibitor activity", "id": "GO:0005092", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005092", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBN4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBN4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 280, "end_pos": 282, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QBN4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 762, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QBN4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QBN4" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], 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} ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QDG7-1", "uniprot_ac": "A0A5G2QDG7", "uniprot_id": "A0A5G2QDG7_PIG", "mass": { "chemical_mass": 88812.0, "monoisotopic_mass": 88812.0 }, "refseq": {}, "gene_names": [ { "name": "EXOC5", "type": "recommended", "evidence": [ { "id": "A0A5G2QDG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDG7" } ] } ], "protein_names": [ { "name": "Exocyst complex component 5", "type": "recommended", "evidence": [ { "id": "A0A5G2QDG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDG7/entry#names_and_taxonomy" } ] }, { "name": "Exocyst complex component Sec10", "type": "synonym", "evidence": [ { "id": "A0A5G2QDG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDG7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDG7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDG7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "EXOC5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDG7", "locus": { "chromosome": "1", "start_pos": 186377458, "end_pos": 186529728, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005066", "url": "https://www.ensembl.org/id/ENSSSCG00000005066" } ] } } ], "crossref": [ { "id": "A0A5G2QDG7", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QDG7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000005066", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005066", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR009976", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009976", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048625", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048625", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048627", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048627", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR12100", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12100", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12100:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12100:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07393", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07393", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF20667", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF20667", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-5620916", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5620916", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287B635", "url": "https://www.uniprot.org/uniprotkb/A0A287B635", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B635-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B635-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QDG7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDG7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QDG7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDG7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QF37", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QF37", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QF37-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QF37-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R692", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R692", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R692-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R692-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F8G5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F8G5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F8G5-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F8G5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SSM0", "url": "https://www.uniprot.org/uniprotkb/F1SSM0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SSM0-1", "url": "https://www.uniprot.org/uniprotkb/F1SSM0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MATTAELFEEPFVADEYIERLVWRTPGGGSRGGPEAFDPKRLLEEFVNHIQELQIMDERIQRKVEKLEQQCQKEAKEFAKKVQELQKSNQVAFQHFQELDEHISYVATKVCHLGDQLEGVNTPRQRAVEAQKLMKYFNEFLDGELKSDVFTNSEKIKEAADIIQKLHLIAQELPFDRFSEVKSKIASKYHDLECQLIQEFTSAQRRGEISRMREVAAVLLHFKGYSHCVDVYIKQCQEGAYLRNDIFEDAAILCQRVNKQVGDIFSNPETVLAKLIQNVFEIKLQSFVKDQLEECRKSDAEQYLKNLYDLYTRTTNLSSKLMEFNLGTDKQTFLSKLIKSIFISYLENYIEVETGYLKSRSAMILQRYYDSKNHQKRSIGTGGIQDLKERIRQRTNLPLGPSIDTHGETFLSQEVVVNLLQETKQAFERCHRLSDPSDLPRNAFRIFTILVEFLCIEHIDYALETGLAGIPSSDSKNANLYFLDVVHQANTIFHLFDKQFNDHLMPLISSSPKLSECLQKKKEIIEQMEMKLDTGIDRTLNCMIGQMKHILAAEQKKTDFKPEDENNVLIQYTNVSKMIQYASKNICFINIFIVLCYAPSFFLLCLEINEKLYFLLREADIHFYVISIEKILQACVKVCAYVRKQVEKIKNSMDGKNVDTVLMELGVRFHRLIYEHLQQYSYSCMGGMLAICDVAEYRKCAKDFKIPLVLQLFDTLHALCNLLVVAPDNLKQVCSGEQLANLDKNILHSFVQLRADYRSARLARHFS", "length": 767, "header": "tr|A0A5G2QDG7-1|A0A5G2QDG7_PIG Isoform 1 of Exocyst complex component 5 OS=Sus scrofa OX=9823 GN=EXOC5 PE=1 SV=1 CANONICAL=A0A5G2QDG7-1" }, "isoforms": [ { "isoform_ac": "A0A287B635-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B635/entry", "sequence": { "sequence": "MATTAELFEEPFVADEYIERLVWRTPGGGSRGGPEAFDPKRLLEEFVNHIQELQIMDERIQRKVEKLEQQCQKEAKEFAKKVQELQKSNQVAFQHFQELDEHISYVATKVCHLGDQLEGVNTPRQRAVEAQKLMKYFNEFLDGELKSDVFTNSEKIKEAADIIQKLHLIAQELPFDRFSEVKSKIASKYHDLECQLIQEFTSAQRRGEISRMREVAAVLLHFKGYSHCVDVYIKQCQESFVKDQLEECRKSDAEQYLKNLYDLYTRTTNLSSKLMEFNLGTDKQTFLSKLIKSIFISYLENYIEVETGYLKSRSAMILQRYYDSKNHQKRSIGTGGIQDLKERIRQRTNLPLGPSIDTHGETFLSQEVVVNLLQETKQAFERCHRLSDPSDLPRNAFRIFTILVEFLCIEHIDYALETGLAGIPSSDSKNANLYFLDVVHQANTIFHLFDKQFNDHLMPLISSSPKLSECLQKKKEIIEQMEMKLDTGIDRTLNCMIGQMKHILAAEQKKTDFKPEDENNVLIQYTNACVKVCAYVRKQVEKIKNSMDGKNVDTVLMELGVRFHRLIYEHLQQYSYSCMGGMLAICDVAEYRKCAKDFKIPLVLQLFDTLHALCNLLVVAPDNLKQVCSGEQLANLDKNILHSFVQLRADYRSARLARHFS", "length": 661, "header": "tr|A0A287B635-1|A0A287B635_PIG Computationally mapped isoform of Exocyst complex component 5 OS=Sus scrofa OX=9823 GN=EXOC5 PE=1 SV=1 CANONICAL=A0A5G2QDG7-1" }, "locus": { "chromosome": "1", "start_pos": 186429870, "end_pos": 186383491, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040330.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040330.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051548.1", "url": "https://www.ensembl.org/id/ENSSSCP00000051548.1" } ] } }, { "isoform_ac": "A0A5G2QDG7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDG7/entry", "sequence": { "sequence": "MATTAELFEEPFVADEYIERLVWRTPGGGSRGGPEAFDPKRLLEEFVNHIQELQIMDERIQRKVEKLEQQCQKEAKEFAKKVQELQKSNQVAFQHFQELDEHISYVATKVCHLGDQLEGVNTPRQRAVEAQKLMKYFNEFLDGELKSDVFTNSEKIKEAADIIQKLHLIAQELPFDRFSEVKSKIASKYHDLECQLIQEFTSAQRRGEISRMREVAAVLLHFKGYSHCVDVYIKQCQEGAYLRNDIFEDAAILCQRVNKQVGDIFSNPETVLAKLIQNVFEIKLQSFVKDQLEECRKSDAEQYLKNLYDLYTRTTNLSSKLMEFNLGTDKQTFLSKLIKSIFISYLENYIEVETGYLKSRSAMILQRYYDSKNHQKRSIGTGGIQDLKERIRQRTNLPLGPSIDTHGETFLSQEVVVNLLQETKQAFERCHRLSDPSDLPRNAFRIFTILVEFLCIEHIDYALETGLAGIPSSDSKNANLYFLDVVHQANTIFHLFDKQFNDHLMPLISSSPKLSECLQKKKEIIEQMEMKLDTGIDRTLNCMIGQMKHILAAEQKKTDFKPEDENNVLIQYTNVSKMIQYASKNICFINIFIVLCYAPSFFLLCLEINEKLYFLLREADIHFYVISIEKILQACVKVCAYVRKQVEKIKNSMDGKNVDTVLMELGVRFHRLIYEHLQQYSYSCMGGMLAICDVAEYRKCAKDFKIPLVLQLFDTLHALCNLLVVAPDNLKQVCSGEQLANLDKNILHSFVQLRADYRSARLARHFS", "length": 767, "header": "tr|A0A5G2QDG7-1|A0A5G2QDG7_PIG Isoform 1 of Exocyst complex component 5 OS=Sus scrofa OX=9823 GN=EXOC5 PE=1 SV=1 CANONICAL=A0A5G2QDG7-1" }, "locus": { "chromosome": "1", "start_pos": 186429870, "end_pos": 186383491, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070892.2", "url": "https://www.ensembl.org/id/ENSSSCT00000070892.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062667.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062667.1" } ] } }, { "isoform_ac": "A0A5G2QF37-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QF37/entry", "sequence": { "sequence": "LNEYIERLVWRTPGGGSRGGPEAFDPKRLLEEFVNHIQELQIMDERIQRKVEKLEQQCQKEAKEFAKKVQELQKSNQVAFQHFQELDEHISYVATKVCHLGDQLEGVNTPRQRAVEAQKLMKYFNEFLDGELKSDVFTNSEKIKEAADIIQKLHLIAQELPFDRFSEVKSKIASKYHDLECQLIQEFTSAQRRGEISRMREVAAVLLHFKGYSHCVDVYIKQCQEGAYLRNDIFEDAAILCQRVNKQVGDIFSNPETVLAKLIQNVFEIKLQSFVKDQLEECRKSDAEQYLKNLYDLYTRTTNLSSKLMEFNLGTDKQTFLSKLIKSIFISYLENYIEVETGYLKSRSAMILQRYYDSKNHQKRSIGTGGIQDLKERIRQRTNLPLGPSIDTHGETFLSQEVVVNLLQETKQAFERCHRLSDPSDLPRNAFRIFTILVEFLCIEHIDYALETGLAGIPSSDSKNANLYFLDVVHQANTIFHLFDKQFNDHLMPLISSSPKLSECLQKKKEIIEQMEMKLDTGIDRTLNCMIGQMKHILAAEQKKTDFNKNIFCAYVRKQVEKIKNSMDGKNVDTVLMELGVRFHRLIYEHLQQYSYSCMGGMLAICDVAEYRKCAKDFKIPLVLQLFDTLHALCNLLVVAPDNLKQVCSGEQLANLDKNILHSFVQLRADYRSARLARHFS", "length": 681, "header": "tr|A0A5G2QF37-1|A0A5G2QDG7_PIG Computationally mapped isoform of Exocyst complex component 5 OS=Sus scrofa OX=9823 GN=EXOC5 PE=1 SV=1 CANONICAL=A0A5G2QDG7-1" }, "locus": { "chromosome": "1", "start_pos": 186418440, "end_pos": 186383491, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067869.2", "url": "https://www.ensembl.org/id/ENSSSCT00000067869.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062809.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062809.1" } ] } }, { "isoform_ac": "A0A5G2R692-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R692/entry", "sequence": { "sequence": "MATTAELFEEPFVADEYIERLVWRTPGGGSRGGPEAFDPKRLLEEFVNHIQELQIMDERIQRKVEKLEQQCQKEAKEFAKKVQELQKSNQIKEAADIIQKLHLIAQELPFDRFSEVKSKIASKYHDLECQLIQEFTSAQRRGEISRMREVAAVLLHFKGYSHCVDVYIKQCQEGAYLRNDIFEDAAILCQRVNKQVGDIFSNPETVLAKLIQNVFEIKLQSFVKDQLEECRKSDAEQYLKNLYDLYTRTTNLSSKLMEFNLGTDKQTFLSKLIKSIFISYLENYIEVETGYLKSRSAMILQRYYDSKNHQKRSIGTGGIQDLKERIRQRTNLPLGPSIDTHGETFLSQEVVVNLLQETKQAFERCHRLSDPSDLPRNAFRIFTILVEFLCIEHIDYALETGLAGIPSSDSKNANLYFLDVVHQANTIFHLFDKQFNDHLMPLISSSPKLSECLQKKKEIIEQMEMKLDTGIDRTLNCMIGQMKHILAAEQKKTDFKPEDENNVLIQYTNACVKVCAYVRKQVEKIKNSMDGKNVDTVLMELGVRFHRLIYEHLQQYSYSCMGGMLAICDVAEYRKCAKDFKIPLVLQLFDTLHALCNLLVVAPDNLKQVCSGEQLANLDKNILHSFVQLRADYRSARLARHFS", "length": 643, "header": "tr|A0A5G2R692-1|A0A5G2QDG7_PIG Computationally mapped isoform of Exocyst complex component 5 OS=Sus scrofa OX=9823 GN=EXOC5 PE=1 SV=1 CANONICAL=A0A5G2QDG7-1" }, "locus": { "chromosome": "1", "start_pos": 186429870, "end_pos": 186383491, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066639.1", "url": "https://www.ensembl.org/id/ENSSSCT00000066639.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069641.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069641.1" } ] } }, { "isoform_ac": "A0A8W4F8G5-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F8G5/entry", "sequence": { "sequence": "RGGPEAFDPKRLLEEFVNHIQELQIMDERIQRKVEKLEQQCQKEAKEFAKKVQELQKSNQVAFQHFQELDEHISYVATKVCHLGDQLEGVNTPRQRAVEAQKLMKYFNEFLDGELKSDVFTNSEKIKEAADIIQKLHLIAQELPFDRFSEVKSKIASKYHDLECQLIQEFTSAQRRGEISRMREVAAVLLHFKGYSHCVDVYIKQCQEGAYLRNDIFEDAAILCQRVNKQVGDIFSNPETVLAKLIQNVFEIKLQSFVKDQLEECRKSDAEQYLKNLYDLYTRTTNLSSKLMEFNLGTDKQTFLSKLIKSIFISYLENYIEVETGYLKSRSAMILQRYYDSKNHQKRSIGTGGIQDLKERIRQRTNLPLGPSIDTHGETFLSQEVVVNLLQETKQAFERCHRLSDPSDLPRNAFRIFTILVEFLCIEHIDYALETGLAGIPSSDSKNANLYFLDVVHQANTIFHLFDKQFNDHLMPLISSSPKLSECLQKKKEIIEQMEMKLDTGIDRTLNCMIGQMKHILAAEQKKTDFNIEKILQACVKVCAYVRKQVEKIKNSMDGKNVDTVLMELGVRFHRLIYEHLQQYSYSCMGGMLAICDVAEYRKCAKDFKIPLVLQLFDTLHALCNLLVVAPDNLKQVCSGEQLANLDKNILHSFVQLRADYRSARLARHFS", "length": 671, "header": "tr|A0A8W4F8G5-1|A0A5G2QDG7_PIG Computationally mapped isoform of Exocyst complex component 5 OS=Sus scrofa OX=9823 GN=EXOC5 PE=1 SV=1 CANONICAL=A0A5G2QDG7-1" }, "locus": { "chromosome": "1", "start_pos": 186418210, "end_pos": 186383491, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000104404.1", "url": "https://www.ensembl.org/id/ENSSSCT00000104404.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075667.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075667.1" } ] } }, { "isoform_ac": "F1SSM0-1", "url": "https://www.uniprot.org/uniprotkb/F1SSM0/entry", "sequence": { "sequence": "LNEYIERLVWRTPGGGSRGGPEAFDPKRLLEEFVNHIQELQIMDERIQRKVEKLEQQCQKEAKEFAKKVQELQKSNQVAFQHFQELDEHISYVATKVCHLGDQLEGVNTPRQRAVEAQKLMKYFNEFLDGELKSDVFTNSEKIKEAADIIQKLHLIAQELPFDRFSEVKSKIASKYHDLECQLIQEFTSAQRRGEISRMREVAAVLLHFKGYSHCVDVYIKQCQEGAYLRNDIFEDAAILCQRVNKQVGDIFSNPETVLAKLIQNVFEIKLQSFVKDQLEECRKSDAEQYLKNLYDLYTRTTNLSSKLMEFNLGTDKQTFLSKLIKSIFISYLENYIEVETGYLKSRSAMILQRYYDSKNHQKRSIGTGGIQDLKERIRQRTNLPLGPSIDTHGETFLSQEVVVNLLQETKQAFERCHRLSDPSDLPRNAFRIFTILVEFLCIEHIDYALETGLAGIPSSDSKNANLYFLDVVHQANTIFHLFDKQFNDHLMPLISSSPKLSECLQKKKEIIEQMEMKLDTGIDRTLNCMIGQMKHILAAEQKKTDFKPEDENNVLIQYTNVSKMIQYASKNICFINIFIVLCYAPSFFLLCLEINEKLYFLLREADIHFYVISIEKILQACVKVCAYVRKQVEKIKNSMDGKNVDTVLMELGVRFHRLIYEHLQQYSYSCMGGMLAICDVAEYRKCAKDFKIPLVLQLFDTLHALCNLLVVAPDNLKQVCSGEQLANLDKNILHSFVQLRADYRSARLARHFS", "length": 754, "header": "tr|F1SSM0-1|A0A5G2QDG7_PIG Computationally mapped isoform of Exocyst complex component 5 OS=Sus scrofa OX=9823 GN=EXOC5 PE=1 SV=4 CANONICAL=A0A5G2QDG7-1" }, "locus": { "chromosome": "1", "start_pos": 186418440, "end_pos": 186383491, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005583.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005583.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005445.4", "url": "https://www.ensembl.org/id/ENSSSCP00000005445.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QF37", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QF37" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-5620916", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5620916", "resource": "Reactome", "description": "VxPx cargo-targeting to cilium" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDG7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDG7" } ], "pmid": "" }, { "name": "exocyst", "id": "GO:0000145", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000145", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDG7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDG7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "exocytosis", "id": "GO:0006887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006887", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDG7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDG7" } ], "pmid": "" }, { "name": "protein localization to plasma membrane", "id": "GO:0072659", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072659", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDG7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDG7" } ], "pmid": "" }, { "name": "kidney development", "id": "GO:0001822", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001822", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDG7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDG7" } ], "pmid": "" }, { "name": "Golgi to plasma membrane transport", "id": "GO:0006893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006893", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDG7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDG7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "small GTPase binding", "id": "GO:0031267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031267", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDG7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDG7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 316, "end_pos": 318, "annotation": "n_glycosylation_sequon" }, { "start_pos": 574, "end_pos": 576, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QDG7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 767, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QDG7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QDG7" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QDG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDG7" }, { "id": "PF20667", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF20667" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Exocyst complex component Sec10 N-terminal", "eco_id": "ECO_0000259", "start_pos": 39, "end_pos": 147, "start_aa": "Pro", "end_aa": "Ser", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A5G2QDG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDG7" }, { "id": "PF07393", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07393" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Exocyst complex component Sec10-like alpha-helical bundle", "eco_id": "ECO_0000259", "start_pos": 158, "end_pos": 575, "start_aa": "Glu", "end_aa": "Val", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 316, "end_pos": 318 }, { "start_pos": 574, "end_pos": 576 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QEL3-1", "uniprot_ac": "A0A5G2QEL3", "uniprot_id": "A0A5G2QEL3_PIG", "mass": { "chemical_mass": 208719.0, "monoisotopic_mass": 208719.0 }, "refseq": {}, "gene_names": [ { "name": "NYNRIN", "type": "recommended", "evidence": [ { "id": "A0A5G2QEL3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEL3" } ] } ], "protein_names": [ { "name": "NYN domain and retroviral integrase containing", "type": "synonym", "evidence": [ { "id": "A0A5G2QEL3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEL3/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEL3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEL3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NYNRIN", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEL3", "locus": { "chromosome": "7", "start_pos": 74879260, "end_pos": 74898568, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000032473", "url": "https://www.ensembl.org/id/ENSSSCG00000032473" } ] } } ], "crossref": 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"https://www.ebi.ac.uk/interpro/entry/IPR012337", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR021869", "url": "https://www.ebi.ac.uk/interpro/entry/IPR021869", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036397", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036397", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041577", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041577", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041588", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041588", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043128", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043128", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043502", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043502", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051101", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051101", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056629", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056629", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056630", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056630", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PYTHMAV", "url": "https://omabrowser.org/oma/group/PYTHMAV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR12876", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12876", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12876:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12876:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF11977", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF11977", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF17919", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17919", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF17921", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17921", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23050", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23050", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23052", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23052", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287B9G4", "url": "https://www.uniprot.org/uniprotkb/A0A287B9G4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9G4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9G4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QEL3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEL3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QEL3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEL3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RDT6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RDT6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RDT6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RDT6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLLSGGDPPAQEWFMVQTKSKPRVQRQRLQVQRIFRVKLNAFQSRPDTPYFWLQLEGPRENMGKAKEYLKGLCSPELWKEVRYPAALHCAFLGAQGLFLDCLCWSTLAYLVPGPPGSLMVGGLTESFIMTQNWLEELVGRLRWGPAPLLTPRGIWEAEVTRAFGALVWIRGDQYAGDLLQLPPAVQELLLSLVRDAAGKEDIIQWLGRIGSSDSRSDPEQLLICPTPQQKEGPAMVSVGDGTGPFLEMGSPENSKKLTSLGAMGALTSGLPGRNTQPRASSNNQGGMDSAHEAGPVQASSSQDPVDHTQALSQQRQVRRGEDKLPLQPPVSALGVCSPWKAWTPGPAFGPLWPGAIAATFWRINELHSLHLAWLLSQACFSFPFWQRPLGPIQFKLPGQNPLPLNLEWKQKELVPLPSVEGPDCRPDGGPGGETALQNCPRPETPNNVMSLLVVSGGSGVKDKANPALPQIGPPLTSAPQLQARSEPGDQGSMQWDNKRPEEGPFPVMPTGQGVPTAQGRPKAQGGLAAPVGPDPKTVPETCKVPMAAAMPTAQTPPANPALPAPPKVPATQMMPAVHEEPAAPKVPLAPMKPAAQVLPTAQKAVVGRLAPAAQMVPAAPKTPTVQKRPAAKTSPAGPQTPRAQTGPVAKPGSTAPKTPTAPKAPAAPKAPAAPKTSRAPKTPTAQKAPTDPGPTLDVAKLLSEGQPSSKGRASFLKSQGEPGRQGPPSSGTLAPSSKGQPQVEGFLGAWEGAPRQPPRHPQANSTVTSFQRYHEALNTPFELNLSGEPGNQGLRRVVIDGSSVAMVHGLQHFFSCRGIAMAVQYFWNRGHREVTVFVPTWQLKKNRRVRESHFLTKLHSLKMLSITPSQLENGKKITTYDYRFMVKLAEETDGVIVTNEQLHVLMNNSKKLMVKDRLLPFTFAGNLFMVPDDPLGRDGPTLDEFLKKPNRLDTDIGNFLKVWKTLPPSSASLSEPVDEADPWPPESLQSVKEVREEKEERQDEEQREEQETQKLEEDDDQDSLLVSVFRAECPSLSEEILRCLSLHDPMDEALDIDLLPVVASPSLDIPWDGKAPCQQVLAHLAQLTIPSNFTALSFFVGFMDSHRDVIPDYEALVGPLHSLLKQKPDWQWALEHEKAFLALKRALVSALCLSAPNSQLPFRLEVTVSQVALMAVVYQEHSGRKHPVAYTSKPLLPDEESAGPQSGGDSPYAVAWALKYFSRCIGDTPVVLGLSYASRTTADPEAWDGRRLAKAWLIRWSLLVQDKGKRALELALLQGLLGENRLLTPAASMPRFFQVLPPFSDLSTFVCIHMSGYCFYREDEWCAGFGLYVLSPTSPPVSLSFSCSPYTPTYAHLAAVACGLERFGRSHLPVVFLTHCNWIFSLLWELLPLWRARGFLSSDGAPLPHPGLLSYIIALVSGLSSLPFIYRTSYRGSLFAVTVDTLAKQGAQGSGQWWHLPNDVPVPVVTRRTAGKKPDLLALQRSDSTLADIIAKLQAGQKLPNSSPFSSAFNSLSLDRESGLLMFKGDKKPRVWVVPRQLRRDLIFAVHDLPMGGHQRPEETFKKLRLLGWWPGMQEHVREYCRSCLYCIPRNLTGSELKVIESLWPLRSTAPWSNLQIEVVGPVTVSEEGHKHVLIVADPNTRWVEAFPLKPYTHMAVAQVLLQHVFARWGVPVRLEAAQGPHFARHVLVSCGLALGAQVASPSRDLQFPCLTSSGAYWEFKRALKEFIFLHGKKWAASLPLLHLAFRASSGLATPFQILTGGEERLTEPLWWEMSSANIEGLKMDVFLLQLMGELLELHWRVAEKASEKAENRRFKRESQEKEWNVGDQVLLLSLPRNGSSAKWVGPFYIGDRLSLSLYRVWGFPTPEKLGCIYPSSLMKTFAKSGTPLSFKVLEQ", "length": 1900, "header": "tr|A0A5G2QEL3-1|A0A5G2QEL3_PIG Isoform 1 of NYN domain and retroviral integrase containing OS=Sus scrofa OX=9823 GN=NYNRIN PE=4 SV=1 CANONICAL=A0A5G2QEL3-1" }, "isoforms": [ { "isoform_ac": "A0A287B9G4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9G4/entry", "sequence": { "sequence": "MDSAHEAGPVQASSSQDPVDHTQALSQQRQVRRGEDKLPLQPPVSALGVCSPWKAWTPGPAFGPLWPGAIAATFWRINELHSLHLAWLLSQACFSFPFWQRPLGPIQFKLPGQNPLPLNLEWKQKELVPLPSVEGPDCRPDGGPGGETALQNCPRPETPNNVMSLLVVSGGSGVKDKANPALPQIGPPLTSAPQLQARSEPGDQGSMQWDNKRPEEGPFPVMPTGQGVPTAQGRPKAQGGLAAPVGPDPKTVPETCKVPMAAAMPTAQTPPANPALPAPPKVPATQMMPAVHEEPAAPKVPLAPMKPAAQVLPTAQKAVVGRLAPAAQMVPAAPKTPTVQKRPAAKTSPAGPQTPRAQTGPVAKPGSTAPKTPTAPKAPAAPKAPAAPKTSRAPKTPTAQKAPTDPGPTLDVAKLLSEGQPSSKGRASFLKSQGEPGRQGPPSSGTLAPSSKGQPQVEGFLGAWEGAPRQPPRHPQANSTVTSFQRYHEALNTPFELNLSGEPGNQGLRRVVIDGSSVAMVHGLQHFFSCRGIAMAVQYFWNRGHREVTVFVPTWQLKKNRRVRESHFLTKLHSLKMLSITPSQLENGKKITTYDYRFMVKLAEETDGVIVTNEQLHVLMNNSKKLMVKDRLLPFTFAGNLFMVPDDPLGRDGPTLDEFLKKPNRLDTDIGNFLKVWKTLPPSSASLSEPVDEADPWPPESLQSVKEVREEKEERQDEEQREEQETQKLAEEEEEEEEEKEEDDDQDSLLVSVFRAECPSLSEEILRCLSLHDPMDEALDIDLLPVVASPSLDIPWDGKAPCQQVLAHLAQLTIPSNFTALSFFVGFMDSHRDVIPDYEALVGPLHSLLKQKPDWQWALEHEKAFLALKRALVSALCLSAPNSQLPFRLEVTVSQVALMAVVYQEHSGRKHPVAYTSKPLLPDEESAGPQSGGDSPYAVAWALKYFSRCIGDTPVVLGLSYASRTTADPEAWDGRRLAKAWLIRWSLLVQDKGKRALELALLQGLLGENRLLTPAASMPRFFQVLPPFSDLSTFVCIHMSGYCFYREDEWCAGFGLYVLSPTSPPVSLSFSCSPYTPTYAHLAAVACGLERFGRSHLPVVFLTHCNWIFSLLWELLPLWRARGFLSSDGAPLPHPGLLSYIIALVSGLSSLPFIYRTSYRGSLFAVTVDTLAKQGAQGSGQWWHLPNDVPVPVVTRRTAGKKPDLLALQRSDSTLADIIAKLQAGQKLPNSSPFSSAFNSLSLDRESGLLMFKGDKKPRVWVVPRQLRRDLIFAVHDLPMGGHQRPEETFKKLRLLGWWPGMQEHVREYCRSCLYCIPRNLTGSELKVIESLWPLRSTAPWSNLQIEVVGPVTVSEEGHKHVLIVADPNTRWVEAFPLKPYTHMAVAQVLLQHVFARWGVPVRLEAAQGPHFARHVLVSCGLALGAQVASPSRDLQFPCLTSSGAYWEFKRALKEFIFLHGKKWAASLPLLHLAFRASSGLATPFQILTGGEERLTEPLWWEMSSANIEGLKMDVFLLQLMGELLELHWRVAEKASEKAENRRFKRESQEKEWNVGDQVLLLSLPRNGSSAKWVGPFYIGDRLSLSLYRVWGFPTPEKLGCIYPSSLMKTFAKSGTPLSFKVLEQ", "length": 1625, "header": "tr|A0A287B9G4-1|A0A287B9G4_PIG Computationally mapped isoform of NYN domain and retroviral integrase containing OS=Sus scrofa OX=9823 GN=NYNRIN PE=4 SV=1 CANONICAL=A0A5G2QEL3-1" }, "locus": { "chromosome": "7", "start_pos": 74889102, "end_pos": 74879729, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051953.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051953.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053168.1", "url": "https://www.ensembl.org/id/ENSSSCP00000053168.1" } ] } }, { "isoform_ac": "A0A5G2QEL3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEL3/entry", "sequence": { "sequence": "MLLSGGDPPAQEWFMVQTKSKPRVQRQRLQVQRIFRVKLNAFQSRPDTPYFWLQLEGPRENMGKAKEYLKGLCSPELWKEVRYPAALHCAFLGAQGLFLDCLCWSTLAYLVPGPPGSLMVGGLTESFIMTQNWLEELVGRLRWGPAPLLTPRGIWEAEVTRAFGALVWIRGDQYAGDLLQLPPAVQELLLSLVRDAAGKEDIIQWLGRIGSSDSRSDPEQLLICPTPQQKEGPAMVSVGDGTGPFLEMGSPENSKKLTSLGAMGALTSGLPGRNTQPRASSNNQGGMDSAHEAGPVQASSSQDPVDHTQALSQQRQVRRGEDKLPLQPPVSALGVCSPWKAWTPGPAFGPLWPGAIAATFWRINELHSLHLAWLLSQACFSFPFWQRPLGPIQFKLPGQNPLPLNLEWKQKELVPLPSVEGPDCRPDGGPGGETALQNCPRPETPNNVMSLLVVSGGSGVKDKANPALPQIGPPLTSAPQLQARSEPGDQGSMQWDNKRPEEGPFPVMPTGQGVPTAQGRPKAQGGLAAPVGPDPKTVPETCKVPMAAAMPTAQTPPANPALPAPPKVPATQMMPAVHEEPAAPKVPLAPMKPAAQVLPTAQKAVVGRLAPAAQMVPAAPKTPTVQKRPAAKTSPAGPQTPRAQTGPVAKPGSTAPKTPTAPKAPAAPKAPAAPKTSRAPKTPTAQKAPTDPGPTLDVAKLLSEGQPSSKGRASFLKSQGEPGRQGPPSSGTLAPSSKGQPQVEGFLGAWEGAPRQPPRHPQANSTVTSFQRYHEALNTPFELNLSGEPGNQGLRRVVIDGSSVAMVHGLQHFFSCRGIAMAVQYFWNRGHREVTVFVPTWQLKKNRRVRESHFLTKLHSLKMLSITPSQLENGKKITTYDYRFMVKLAEETDGVIVTNEQLHVLMNNSKKLMVKDRLLPFTFAGNLFMVPDDPLGRDGPTLDEFLKKPNRLDTDIGNFLKVWKTLPPSSASLSEPVDEADPWPPESLQSVKEVREEKEERQDEEQREEQETQKLEEDDDQDSLLVSVFRAECPSLSEEILRCLSLHDPMDEALDIDLLPVVASPSLDIPWDGKAPCQQVLAHLAQLTIPSNFTALSFFVGFMDSHRDVIPDYEALVGPLHSLLKQKPDWQWALEHEKAFLALKRALVSALCLSAPNSQLPFRLEVTVSQVALMAVVYQEHSGRKHPVAYTSKPLLPDEESAGPQSGGDSPYAVAWALKYFSRCIGDTPVVLGLSYASRTTADPEAWDGRRLAKAWLIRWSLLVQDKGKRALELALLQGLLGENRLLTPAASMPRFFQVLPPFSDLSTFVCIHMSGYCFYREDEWCAGFGLYVLSPTSPPVSLSFSCSPYTPTYAHLAAVACGLERFGRSHLPVVFLTHCNWIFSLLWELLPLWRARGFLSSDGAPLPHPGLLSYIIALVSGLSSLPFIYRTSYRGSLFAVTVDTLAKQGAQGSGQWWHLPNDVPVPVVTRRTAGKKPDLLALQRSDSTLADIIAKLQAGQKLPNSSPFSSAFNSLSLDRESGLLMFKGDKKPRVWVVPRQLRRDLIFAVHDLPMGGHQRPEETFKKLRLLGWWPGMQEHVREYCRSCLYCIPRNLTGSELKVIESLWPLRSTAPWSNLQIEVVGPVTVSEEGHKHVLIVADPNTRWVEAFPLKPYTHMAVAQVLLQHVFARWGVPVRLEAAQGPHFARHVLVSCGLALGAQVASPSRDLQFPCLTSSGAYWEFKRALKEFIFLHGKKWAASLPLLHLAFRASSGLATPFQILTGGEERLTEPLWWEMSSANIEGLKMDVFLLQLMGELLELHWRVAEKASEKAENRRFKRESQEKEWNVGDQVLLLSLPRNGSSAKWVGPFYIGDRLSLSLYRVWGFPTPEKLGCIYPSSLMKTFAKSGTPLSFKVLEQ", "length": 1900, "header": "tr|A0A5G2QEL3-1|A0A5G2QEL3_PIG Isoform 1 of NYN domain and retroviral integrase containing OS=Sus scrofa OX=9823 GN=NYNRIN PE=4 SV=1 CANONICAL=A0A5G2QEL3-1" }, "locus": { "chromosome": "7", "start_pos": 74898378, "end_pos": 74879729, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084763.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084763.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063120.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063120.1" } ] } }, { "isoform_ac": "A0A5G2RDT6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RDT6/entry", "sequence": { "sequence": "MLLSGGDPPAQEWFMVQTKSKPRVQRQRLQVQRIFRVKLNAFQSRPDTPYFWLQLEGPRENMGKAKEYLKGLCSPELWKEVRYPAALHCAFLGAQGLFLDCLCWSTLAYLVPGPPGSLMVGGLTESFIMTQNWLEELVGRLRWGPAPLLTPRGIWEAEVTRAFGALVWIRGDQYAGDLLQLPPAVQELLLSLVRDAAGKEDIIQWLGRIGSSDSRSDPEQLLICPTPQQKEGPAMVSVGDGTGPFLEMGSPENSKKLTSLGRNRFGFSAPTSATPRKYSNNQGGMDSAHEAGPVQASSSQDPVDHTQALSQQRQVRRGEDKLPLQPPVSALGVCSPWKAWTPGPAFGPLWPGAIAATFWRINELHSLHLAWLLSQACFSFPFWQRPLGPIQFKLPGQNPLPLNLEWKQKELVPLPSVEGPDCRPDGGPGGETALQNCPRPETPNNVMSLLVVSGGSGVKDKANPALPQIGPPLTSAPQLQARSEPGDQGSMQWDNKRPEEGPFPVMPTGQGVPTAQGRPKAQGGLAAPVGPDPKTVPETCKVPMAAAMPTAQTPPANPALPAPPKVPATQMMPAVHEEPAAPKVPLAPMKPAAQVLPTAQKAVVGRLAPAAQMVPAAPKTPTVQKRPAAKTSPAGPQTPRAQTGPVAKPGSTAPKTPTAPKAPAAPKAPAAPKTSRAPKTPTAQKAPTDPGPTLDVAKLLSEGQPSSKGRASFLKSQGEPGRQGPPSSGTLAPSSKGQPQVEGFLGAWEGAPRQPPRHPQANSTVTSFQRYHEALNTPFELNLSGEPGNQGLRRVVIDGSSVAMVHGLQHFFSCRGIAMAVQYFWNRGHREVTVFVPTWQLKKNRRVRESHFLTKLHSLKMLSITPSQLENGKKITTYDYRFMVKLAEETDGVIVTNEQLHVLMNNSKKLMVKDRLLPFTFAGNLFMVPDDPLGRDGPTLDEFLKKPNRLDTDIGNFLKVWKTLPPSSASLSEPVDEADPWPPESLQSVKEVREEKEERQDEEQREEQETQKLEEDDDQDSLLVSVFRAECPSLSEEILRCLSLHDPMDEALDIDLLPVVASPSLDIPWDGKAPCQQVLAHLAQLTIPSNFTALSFFVGFMDSHRDVIPDYEALVGPLHSLLKQKPDWQWALEHEKAFLALKRALVSALCLSAPNSQLPFRLEVTVSQVALMAVVYQEHSGRKHPVAYTSKPLLPDEESAGPQSGGDSPYAVAWALKYFSRCIGDTPVVLGLSYASRTTADPEAWDGRRLAKAWLIRWSLLVQDKGKRALELALLQGLLGENRLLTPAASMPRFFQVLPPFSDLSTFVCIHMSGYCFYREDEWCAGFGLYVLSPTSPPVSLSFSCSPYTPTYAHLAAVACGLERFGRSHLPVVFLTHCNWIFSLLWELLPLWRARGFLSSDGAPLPHPGLLSYIIALVSGLSSLPFIYRTSYRGSLFAVTVDTLAKQGAQGSGQWWHLPNDVPVPVVTRRTAGKKPDLLALQRSDSTLADIIAKLQAGQKLPNSSPFSSAFNSLSLDRESGLLMFKGDKKPRVWVVPRQLRRDLIFAVHDLPMGGHQRPEETFKKLRLLGWWPGMQEHVREYCRSCLYCIPRNLTGSELKVIESLWPLRSTAPWSNLQIEVVGPVTVSEEGHKHVLIVADPNTRWVEAFPLKPYTHMAVAQVLLQHVFARWGVPVRLEAAQGPHFARHVLVSCGLALGAQVASPSRDLQFPCLTSSGAYWEFKRALKEFIFLHGKKWAASLPLLHLAFRASSGLATPFQILTGGEERLTEPLWWEMSSANIEGLKMDVFLLQLMGELLELHWRVAEKASEKAENRRFKRESQEKEWNVGDQVLLLSLPRNGSSAKWVGPFYIGDRLSLSLYRVWGFPTPEKLGCIYPSSLMKTFAKSGTPLSFKVLEQ", "length": 1898, "header": "tr|A0A5G2RDT6-1|A0A5G2QEL3_PIG Computationally mapped isoform of NYN domain and retroviral integrase containing OS=Sus scrofa OX=9823 GN=NYNRIN PE=4 SV=1 CANONICAL=A0A5G2QEL3-1" }, "locus": { "chromosome": "7", "start_pos": 74898378, "end_pos": 74879729, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079132.2", "url": "https://www.ensembl.org/id/ENSSSCT00000079132.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072630.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072630.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 226, "start_aa": "Thr", "end_pos": 226, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr226", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2RDT6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RDT6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0AAA9ST79-1", "protein_name": "NYN domain and retroviral integrase containing", "gene_name": "NYNRIN", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAGRYWAIPCLSTSAALGPSLWFLLSFLPHPSLACHFSPSSVLRKALRCASPQEPSLTRARIYSLFLHRGSNLRSGISVACAAYLFVLHPEAGRPRSFCLHEYLKGLCNPELWKEVRYPAALHCAFLGAQGLFLDCLCWSTLAYLVPGPPGSLMVGGLTESFVMTQNWLEELVGRLRWGPAPLLTPRGIWEAEVTRAFGALVWIRGDQYAGDLLQLPPAVQELLLSLVRDAAGKEDIIQWLSRIGTSDSRSDSELLICPTHQQKEGPTMVAVGDGPGPFVEMGSPENSKRLTSLGATGALISGTPGLSTQQETANQLVRVTSNNQGGVDCAREEGSVQASSSQDSVDHTQASSQQRQVRRGEDKLPLQPPVSALSVCSPWKAWTPGPTFAPMWPGAIAATFWRINELHSLHLAWLLSQACFSFPFWQRPLGPIQFKLPGQNPLPLNLGWKQKELVPLPSVESPDCTPDGGPGGEAALQNCPRPETPKKVMSLLVVSGGSGVKDKSIPGLPQIGPPLTSTPQLQARSELGDQGSVQWDCKGPEEGPVPAPPTGQGVPAAQGGLTAPSGPDSKTVPETLKVPMAAAVPTAQTPPTNPVLPAAPKVPETQMMVAAHEERAASEVPSVPTKPEAQVVPTAQKAAVGEPAPAAPHTPTAQKRQAAKTSPAGPQTSRAQTGPAPKTGPTAPKVPAAPQTSRTPKTPAAQKAPAGPGSTLDASKLLSESQPPSRGSASFLKGQGQPGSQGLQCSGTLAPSSKRQPQVEGLLGAGEGTPRQPTRHPQASNTVTSFQRYHEALNTPFELDLSEEPGNPELRRVVIDGSSVAMVHGLQHFFSCRGIAMAVQYFWNRGHREVTVFIPTWQLKKNRRVRESHFLTKLHSLKMLSITPSQLENGKKITTYDYRFMVKLAEETDGIIVTNEQLHVLMNNSKKLMVKDRLLPFTFAGNLFMVPDDPLGRDGPTLDEFLKKPNRLDTDIGNFLKVWKTLPPSSASISELRDDTDPGPPESLQNVEEIREEQEEEERQDEEQREEQEMQKPAEEEEEDLDSSLMSVFKAECPSLSEEILRCLSLHDPQDEALDIDLQPAVASPSLGIPWDGKAPCQQVLAQLAQLTIPSNFTALSFFMGFTDSHRDVIPDYEALVAPLHSLLKQKPDWRWELDHEKAFLALKRALVSALCLSVPNPQLPFHLEVTVSQVALTAVVYQEHSGRKHPVAYTSKPLLPDEDSEGPQSGGDSPYAVAWALKHFSRYIGDTPVVLDLFYASRTSVDPEAWDGRRVAKAWLIRWALLVQDKGKRALELTLLQGLLGKNRLLTPTASMPRFFQVLPPFSDLSTFVCIHMSGYCFYREDEWCAGFGLYVLSPTSPPVSLSFSCSPYTPTYAHLAAVACGLERFGQSHMPVVFLTHCNWIFSLLWELLPLWRARGFLSSDGTPLPHPSLLSYIIDLTSGLSSLPFIYRTSYRGSLFAVTVDTLAKEGAQGGDQCWNLPNDVPAPVVTPRTVCKRPDLLALQRSDSTLADTMAKLQAGQKVSNSSPFSSAFSSLSLDKESGLLMFKGDKRPRVWVVPRQLRRDLIFAVHDGPMGAHQRPEETYRKLRLLGWWPGMQEHVRHYCRSCLFCIPRNLLGSEVKVIESLWPLRSTAPWSNLQIEVVGPVTVSEEGHKHVLIVADPNTRWVEAFPLKPYTHTAVAQLLLQHVFARWGIPVRLEAAQGPQFARHVLVSCGLALGVHVASPSRDLQFPCLTSSGAYWEFKRALKEFIFLHGKKWAASLPLLHLAFRASSSQASPFHILTGAEERLTEPLWWEMSSANIEGLKMDLFLLQLMRELLELHWRLAEKTSEKAENRRFKRERQEKEWSVGDQVLVLSLPRNGSSAKWVGPFYIGDRLSPSLYRVWGFPTPEKLGCIYPSSLMKPFAKSVTPLSFKVLEQ", "length": 1921 }, "evidence": [ { "id": "A0A5G2QEL3", "url": "https://omabrowser.org/oma/group/A0A5G2QEL3/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "M0RAC3-1", "protein_name": "NYN domain and retroviral integrase containing", "gene_name": "Nynrin", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLLSGGKPPAQEWFMVQTKSKPRVHRQRLQVQRIFRVKVTAFQSRPDTPYFWLQLEGPRENTGKAKEYLKGLCNPELWKEVRYPPVLHCAFLGAQGLFLDCLCWSTLAYLVPGPPGSLMVGGLTESFTMTQNWLEELVARLRWGPAPMITPRGVWETEVTRAFGALVWIRCDQYARDLLQLPPAVQELLLSLVRDAAGKEDIIEWLGHFGISGIYPKPPDFLICPALQKKEGSSLVTIGESPVPLQEIGTLNRASENSKKLTGLGAAGSVVPAQSTPQDTAQQLVRDGSNKQGDDRNSAGEEGATAQDSAGEEGATAQDPSSQDSANHTQALLQQKQGQKTENRISLQSPALSVCPSWKAWAPGPAFGPSWPGTIAATFWKINELQSLHLVWLLSQACFNFPFWQRPVGPIQLRLPGQNPLPLKLEWKQKELVPLPTAESPACRPDGDLGREAALKHSLRPETPTKIISLSVVPGDCGIKEKVSPGLSQVGPSSTSIPQAGVELGDEGRALSDCKGPEKLSSSALSTEQGGPRIQERPMAQAGMTGQSVPDTPTMSETLEVTTAAAVSKVECTPTEGLPATPKVPTTLKKPAVYTEPTAPQVPSAPTEPAAPVVSTIPKAAVDQPAAPATPTTPQTPTAQKTPSVKTPAGPQTPKVQTGIIAKAESTAPKAPAATQAPAASNASSVSKTPEAQASAIAGPTMDVTKLLSEEVQASKCRATVLKGQGKPGRQGLQSSSTMASRSKHQFLKEGLLGAWDGTQRLSPHSQGTNIVTSFQRFNEALNTPFEMNLSEEPGNPGLRRVVIDGSSVAMVHGLQHFFSCRGIAMAVQYFWNRGHREITVFVPTWQLKKNRRVRESHFLTKLHRLKMLSITPSQLENGKKITTYDYRFMVKLAEETDGVIVTNEQIHILMNNSKKLMVKDRLLPFTFAGSLFMVPDDPLGRDGPTLEEFLKKPNRLDMDIGNFLKVWKTLPPSSASISELGDAADAEPLEGPQNIEEGEKGEESLEEELVEEPGIPKPDEQEEQDSDPVSVFGVECPSFSEEILQCLSLHDPSEGALDIDLLPVVSSPYLDVPWDGKAPSQQVLTQLAQLTIPSNFTALSFFMGFMDSHRDVIPDYEVLVGPLHSLLKQKPDWQWNQEHEKSFLALKRALVCALCLSTPNPDLPFYLEVTVSQVSLTASLHQEHSGRKHPIAYTSKPLLPDEDSEGPQSGGDSPYAVAWALKHFSRCVGDNPVVLRLSYASRTTVDNEAWDSRRASNAWLIRWSLLLQDKGKRELELSLLQGLLGENQLLTPASSMPRVFQLLPPSSDLSTFICVHVSGYCFYHDDELCAGFGLYILSPTSPPVSLAFSCSPYTSTYAHLAGVACGLERFGQSQLPVVFVTHCNWIFSVLWEFLPLWKVRGFLSSDGASLPHPSLLSYIISLTSCFSSLPFIYRTSYRGSLFAVTVDTLAKQGAQGGGQWWDLPKDVPVPIVTPHTKGRKPNLLALQMSDSTLANIIAKLQAGQKLSGPSPFSSAFNSLSLDQDSGLLMFKAEKHPRVWVVPRQLRRDLIFSVHDSPMGDHQGPEDTYKTLRLLGWWPGMQDHVKDYCRSCLFCIPRNLIGGELKVIESPWPLRSTAPWSSLQIEVVGPVTVSEEGHKHVLIVADANTRWVEAFPLKPYTHVAVAQVLLQHVFARWGVPIRLEAAQGPQFARHVLVSCGLALGAQVTTLSRSLQFPCLMSSEAYWEFKRALKEFIFLYGKKWAASLPLLHLAFRASTTEATPFQVLTGGEMRLMEPSWWEMSRANIEGLKMDAFLLQLIRELLDLHWRVAEKASEKAENRRFKRESRESEWSVGDQVLLLSLPRNGSSAKWMGPFYIGDRLSLSLYRVWGFPVPDKLGCVYPSSLMKAFPKNDTPLPLDLEQ", "length": 1903 }, "evidence": [ { "id": "A0A5G2QEL3", "url": "https://omabrowser.org/oma/group/A0A5G2QEL3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5DTZ0-1", "protein_name": "Protein NYNRIN", "gene_name": "Nynrin", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLSGGKPPAQEWFMVQTKSKPRVHRQRLQVQRIFRVKVTAFQSRPDTPYFWLQLEGPRENTGKAKEYLKGLCNPELWKEVRYPPVLHCAFLGAQGLFLDCLCWSTLAYLVPGPPGSLMVGGLTESFTMTQNWLEELVARLRWGPAPMITPRGVWETEVTRAFGALVWIRCDKYAGDLLQLPPAVQELLLSLVRDAAGKEDIIEWLGHFGISGTCPNPEILICLARQQKESASLVTIKESPGTLQEIGALNRASENSKKTTSSGAAGSLTQAQSPPAQETADQLARDQSNKQGDETNSVGEEGTATQDTSSQDSENPTQALLQQKQVPKNEERISLLLPVSALSAYTSWKVWAPGTAFGPSWPGTIAATFWKINELQSLHLAWLLSQACLNFPFWQRPTGPIQLKLPGRNPLPLKLEWKQKELVPLSSAGSPACRPGGDLGRETALKHSPRPEIPSKIISLSVVPGGCGIKEKVSPGLLQVGQSSTSVGDKGISLSDCKGLEKPFSLALSTEQGGSTAQERPLAQVPEAPTVSETLQVATAAEVSNVEHPPTGEGLPATPKVPTALKKPAVYTEPTAPKVPSAPTEPAAPATPTAPQTPTAQKTPSVKTLAGLQTPKVQSETIATAGSEVPKAPAASAVAGPTVDVAQLLSEVQASKNRAIMLKVQGKPGRQGFQPSSTVPSRSKHQFLKEGLLGAWEGSQRLSPHSQGTNIVTSFQRYNEALNTPFEMNLSEEPGNPGLRRVVIDGSSVAMVHGLQHFFSCRGIAMAVQYFWNRGHREITVFVPTWQLKKNRRVRESHFLTKLHRLKMLSITPSQLENGKKITTYDYRFMVKLAEETDGVIVTNEQIHILMNNSKKLMVKDRLLPFTFAGSLFMVPDDPLGRDGPTLEEFLKKPNRLDMDIGNFLKVWKTLPPSSASISELSDDADAEPLEDPQDVEEAGKEEGSLEEEPGIPKPDEEDEQDTNPVSVFGVECPSFSEEILQCLSLHDPSEGTLDIDLLPVVSSPYLDVPWDGKAPCQQVLAQLAQLNIPSNFTALSFFMGFMDSHRDVISDYEDLVGPLHGLLKQKPDWQWNQEHEKSFLALKRALVCALCLSTPNPNLPFYLEVTVSQVSLTASLHQEHSGRKHPIAYTSKPLLPDEDSEGPQSGGDSPYAVAWALKHFARCVGDNPVVLRLSYASRTTVDNEAWDSRRASKAWLIRWSLLLQDKGKRELELSLLQGLLGENQLLTPPSSMPRVFQPLPPSSDLSTFICVHVSGYCFYRDDELCAGFGLYILSPTSPPVSLAFSCSPYTTTYAHLAAVACGLERFGQSQHPVVFLTHCNWIFSVLWELLPLWRVRGFLSSDGASLPHPSLLSYIISLTSGFSPLPFIYRTSYRGSLFAVTVDTLAKQGAQGGGQWWDLPKDVPVPMVTPHPKGRKPNLLALQLSDTTLADIIAKLQAGQKLSGPSPFSSAFNSLSLDQDSGLLMFKGERHPRVWVVPRQLRRDLIFSVHDSPIGEHQGLEDTYKTVRLLGWWPGMQDHVRDYCRSCLFCIPRNLIGGELKVIESPWPLRSTAPWSSLQIEVVGPVTVSEEGHKHVLIVADANTRWVEAFPLKPYTHVAVAQVLLQHVFARWGVPIRLEAAQGPQFARHVLVSCGLALGAQVTTLSRALQFPCLMSSEAYWEFKRALKEFIFLYGKKWAASLPLLHLAFRASTTEATPFQVLTGGEMKLMEPVWWEMSRANIEGLKMDAFLLQLMRELLDLHWRVAEKASEKAENRRFKRESQENEWSVGDQVLLLSLPRNGSSAKWMGPFYIGDRLSLSLYRVWGFPVPDKLGCVYPSSLMKAFPKHDTPLSLDVEQ", "length": 1840 }, "evidence": [ { "id": "A0A5G2QEL3", "url": "https://omabrowser.org/oma/group/A0A5G2QEL3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9P2P1-1", "protein_name": "Protein NYNRIN", "gene_name": "NYNRIN", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLLSGGDPPAQEWFMVQTKSKPRVQRQRLQVQRIFRVKLNAFQSRPDTPYFWLQLEGPRENMGKAKEYLKGLCSPELWKEVRYPPILHCAFLGAQGLFLDCLCWSTLAYLVPGPPGSLMVGGLTESFIMTQNWLEELVGRLRWGPAPLLTPRGIWEAEVTRAFGALVWIRGDQHAGDLLQLPPAVQELLLSLVRDAAGKEDIIEWLSRFGISDSHSDPEVLICPPQQQKEAPAMVSVGESPGPFVDMGTLQNRGPENSKRLSSLGATGSLITAQSTPQEAANQLVRVGSNNQDGMDSAQEEGTVQATSSQDSTNHTQALLKQRQVQKIEDKLLFQPPVSALGVCPPWKAWTPGPAFGPLWPGAIAATFWRINELHSLHLAWLLSQACFNFPFWQRPLGPIQLKLPGQNPLPLNLEWKQKELAPLPSAESPAGRPDGGLGGEAALQNCPRPEISPKVTSLLVVPGSSDVKDKVSSDLPQIGPPLTSTPQLQAGGEPGDQGSMQLDFKGLEEGPAPVLPTGQGKPVAQGGLTDQSVPGAQTVPETLKVPMAAAVPKAENPSRTQVPSAAPKLPTSRMMLAVHTEPAAPEVPLAPTKPTAQLMATAQKTVVNQPVLVAQVEPTTPKTPQAQKMPVAKTSPAGPKTPKAQAGPAATVSKAPAASKAPAAPKVPVTPRVSRAPKTPAAQKVPTDAGPTLDVARLLSEVQPTSRASVSLLKGQGQAGRQGPQSSGTLALSSKHQFQMEGLLGAWEGAPRQPPRHLQANSTVTSFQRYHEALNTPFELNLSGEPGNQGLRRVVIDGSSVAMVHGLQHFFSCRGIAMAVQFFWNRGHREVTVFVPTWQLKKNRRVRESHFLTKLHSLKMLSITPSQLENGKKITTYDYRFMVKLAEETDGIIVTNEQIHILMNSSKKLMVKDRLLPFTFAGNLFMVPDDPLGRDGPTLDEFLKKPNRLDTDIGNFLKVWKTLPPSSASVTELSDDADSGPLESLPNMEEVREEKEERQDEEQRQGQGTQKAAEEDDLDSSLASVFRVECPSLSEEILRCLSLHDPPDGALDIDLLPGAASPYLGIPWDGKAPCQQVLAHLAQLTIPSNFTALSFFMGFMDSHRDAIPDYEALVGPLHSLLKQKPDWQWDQEHEEAFLALKRALVSALCLMAPNSQLPFRLEVTVSHVALTAILHQEHSGRKHPIAYTSKPLLPDEESQGPQSGGDSPYAVAWALKHFSRCIGDTPVVLDLSYASRTTADPEVREGRRVSKAWLIRWSLLVQDKGKRALELALLQGLLGENRLLTPAASMPRFFQVLPPFSDLSTFVCIHMSGYCFYREDEWCAGFGLYVLSPTSPPVSLSFSCSPYTPTYAHLAAVACGLERFGQSPLPVVFLTHCNWIFSLLWELLPLWRARGFLSSDGAPLPHPSLLSYIISLTSGLSSLPFIYRTSYRGSLFAVTVDTLAKQGAQGGGQWWSLPKDVPAPTVSPHAMGKRPNLLALQLSDSTLADIIARLQAGQKLSGSSPFSSAFNSLSLDKESGLLMFKGDKKPRVWVVPTQLRRDLIFSVHDIPLGAHQRPEETYKKLRLLGWWPGMQEHVKDYCRSCLFCIPRNLIGSELKVIESPWPLRSTAPWSNLQIEVVGPVTISEEGHKHVLIVADPNTRWVEAFPLKPYTHTAVAQVLLQHVFARWGVPVRLEAAQGPQFARHVLVSCGLALGAQVASLSRDLQFPCLTSSGAYWEFKRALKEFIFLHGKKWAASLPLLHLAFRASSTDATPFKVLTGGESRLTEPLWWEMSSANIEGLKMDVFLLQLVGELLELHWRVADKASEKAENRRFKRESQEKEWNVGDQVLLLSLPRNGSSAKWVGPFYIGDRLSLSLYRIWGFPTPEKLGCIYPSSLMKAFAKSGTPLSFKVLEQ", "length": 1898 }, "evidence": [ { "id": "A0A5G2QEL3", "url": "https://omabrowser.org/oma/group/A0A5G2QEL3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEL3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEL3" } ], "pmid": "" }, { "name": "RNA-DNA hybrid ribonuclease activity", "id": "GO:0004523", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004523", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEL3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEL3" } ], "pmid": "" }, { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEL3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEL3" } ], "pmid": "" }, { "name": "RNA endonuclease activity", "id": "GO:0004521", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004521", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEL3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEL3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA integration", "id": "GO:0015074", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015074", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEL3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEL3" } ], "pmid": "" }, { "name": "3'-UTR-mediated mRNA destabilization", "id": "GO:0061158", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061158", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEL3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEL3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEL3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEL3" } ], "pmid": "" }, { "name": "cytoplasmic ribonucleoprotein granule", "id": "GO:0036464", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036464", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEL3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEL3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1092, "end_pos": 1094, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1505, "end_pos": 1507, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1595, "end_pos": 1597, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1842, "end_pos": 1844, "annotation": "n_glycosylation_sequon" }, { "start_pos": 764, "end_pos": 766, "annotation": "n_glycosylation_sequon" }, { "start_pos": 784, "end_pos": 786, "annotation": "n_glycosylation_sequon" }, { "start_pos": 907, "end_pos": 909, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QEL3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEL3" }, { "id": "PS50994", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50994" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Integrase catalytic", "eco_id": "ECO_0000259", "start_pos": 1611, "end_pos": 1687, "start_aa": "Arg", "end_aa": "Phe", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A5G2QEL3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEL3" }, { "id": "PS50879", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50879" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RNase H type-1", "eco_id": "ECO_0000259", "start_pos": 1306, "end_pos": 1452, "start_aa": "Leu", "end_aa": "Gln", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 226 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1092, "end_pos": 1094 }, { "start_pos": 1505, "end_pos": 1507 }, { "start_pos": 1595, "end_pos": 1597 }, { "start_pos": 1842, "end_pos": 1844 }, { "start_pos": 764, "end_pos": 766 }, { "start_pos": 784, "end_pos": 786 }, { "start_pos": 907, "end_pos": 909 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1W122-1", "uniprot_ac": "A0A4X1W122", "uniprot_id": "A0A4X1W122_PIG", "mass": { "chemical_mass": 20209.0, "monoisotopic_mass": 20209.0 }, "refseq": { "ac": "XP_001928505", "name": "translocon-associated protein subunit beta", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001928505" }, "gene_names": [ { "name": "SSR2", "type": "recommended", "evidence": [ { "id": "A0A4X1W122", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W122" } ] }, { "name": "SSR2", "type": "synonym", "evidence": [ { "id": "XP_001928505", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001928505" } ] } ], "protein_names": [ { "name": "Translocon-associated protein subunit beta", "type": "recommended", "evidence": [ { "id": "A0A4X1W122", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W122/entry#names_and_taxonomy" } ] }, { "name": "Signal sequence receptor subunit beta", "type": "synonym", "evidence": [ { "id": "A0A4X1W122", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W122/entry#names_and_taxonomy" } ] }, { "name": "TRAP-beta", "type": "synonym", "evidence": [ { "id": "A0A4X1W122", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W122/entry#names_and_taxonomy" } ] }, { "name": "translocon-associated protein subunit beta", "type": "synonym", "evidence": [ { "id": "XP_001928505", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001928505" } ] } ], "function": [ { "annotation": "TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W122", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W122#function" }, { "database": "UniProtKB", "id": "ARBA00002838", "url": "https://www.uniprot.org/uniprotkb/ARBA00002838#function" }, { "database": "UniProtKB", "id": "PIRNR016400", "url": "https://www.uniprot.org/uniprotkb/PIRNR016400#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W122", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W122" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SSR2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W122", "locus": { "chromosome": "4", "start_pos": 94021962, "end_pos": 94011527, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000006501", "url": "https://www.ensembl.org/id/ENSSSCG00000006501" } ] } } ], "crossref": [ { "id": "ENSSSCG00000006501", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000006501", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100154318", "url": "https://www.ncbi.nlm.nih.gov/gene/100154318", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR008856", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008856", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100154318", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154318", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ILWHSSK", "url": "https://omabrowser.org/oma/group/ILWHSSK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1W122", "url": "https://www.orthodb.org/?gene=A0A4X1W122", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12861", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12861", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12861:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12861:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05753", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05753", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_001928505", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001928505", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287BAH7", "url": "https://www.uniprot.org/uniprotkb/A0A287BAH7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BAH7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BAH7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VZX8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZX8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VZX8-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZX8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W122", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W122", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W122-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W122-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRLLAFVVLTLFAVTQAEEGARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEDGPVVIGFTSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYDTPKTKKN", "length": 183, "header": "tr|A0A4X1W122-1|A0A4X1W122_PIG Isoform 1 of Translocon-associated protein subunit beta OS=Sus scrofa OX=9823 GN=SSR2 PE=3 SV=1 CANONICAL=A0A4X1W122-1" }, "isoforms": [ { "isoform_ac": "A0A287BAH7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BAH7/entry", "sequence": { "sequence": "MRLLAFVVLTLFAVTQAEEGARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEDGPVVIGFTSAPGQGGILAQREFDRRFSPHPPLSEKSGRSDESCGGSWRLPSVSAGLGKLLPNGVF", "length": 182, "header": "tr|A0A287BAH7-1|A0A287BAH7_PIG Computationally mapped isoform of Signal sequence receptor subunit 2 OS=Sus scrofa OX=9823 GN=SSR2 PE=4 SV=1 CANONICAL=A0A4X1W122-1" }, "locus": { "chromosome": "4", "start_pos": 94021940, "end_pos": 94011527, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045600.3", "url": "https://www.ensembl.org/id/ENSSSCT00000045600.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053510.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053510.2" } ] } }, { "isoform_ac": "A0A4X1VZX8-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZX8/entry", "sequence": { "sequence": "MRLLAFVVLTLFAVTQAEEGARLLASKSLLNRYAVEGRDLTLQYNIYNVGSRLASPVHLDRGESWLSGSLIGDSPPIFWTGQPSES", "length": 86, "header": "tr|A0A4X1VZX8-1|A0A4X1W122_PIG Computationally mapped isoform of Translocon-associated protein subunit beta OS=Sus scrofa OX=9823 GN=SSR2 PE=3 SV=1 CANONICAL=A0A4X1W122-1" }, "locus": { "chromosome": "4", "start_pos": 94021400, "end_pos": 94011527, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007120.5", "url": "https://www.ensembl.org/id/ENSSSCT00000007120.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000006928.4", "url": "https://www.ensembl.org/id/ENSSSCP00000006928.4" } ] } }, { "isoform_ac": "A0A4X1W122-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W122/entry", "sequence": { "sequence": "MRLLAFVVLTLFAVTQAEEGARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEDGPVVIGFTSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYDTPKTKKN", "length": 183, "header": "tr|A0A4X1W122-1|A0A4X1W122_PIG Isoform 1 of Translocon-associated protein subunit beta OS=Sus scrofa OX=9823 GN=SSR2 PE=3 SV=1 CANONICAL=A0A4X1W122-1" }, "locus": { "chromosome": "4", "start_pos": 94021483, "end_pos": 94011527, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081263.2", "url": "https://www.ensembl.org/id/ENSSSCT00000081263.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069438.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069438.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VZX8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZX8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100154318", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154318", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "F7F8A8-1", "protein_name": "Translocon-associated protein subunit beta", "gene_name": "Ssr2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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{ "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", 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"https://www.uniprot.org/uniprotkb/A0A5G2QE59/entry#names_and_taxonomy" } ] }, { "name": "Ra-reactive factor serine protease p100", "type": "synonym", "evidence": [ { "id": "A0A5G2QE59", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE59/entry#names_and_taxonomy" } ] }, { "name": "Serine protease 5", "type": "synonym", "evidence": [ { "id": "A0A5G2QE59", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE59/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Precursor of a serum protease that activates the complement pathway of the complement system, a cascade of proteins that leads to phagocytosis and breakdown of pathogens and signaling that strengthens the adaptive immune system.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QE59", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE59#function" }, { "database": "UniProtKB", "id": "ARBA00094396", "url": "https://www.uniprot.org/uniprotkb/ARBA00094396#function" }, { "database": "UniProtKB", "id": "A0A8D1G1R7", "url": "https://www.uniprot.org/uniprotkb/A0A8D1G1R7#function" } ] }, { "annotation": "Serine protease that activates the alternative pathway of the complement system, a cascade of proteins that leads to phagocytosis and breakdown of pathogens and signaling that strengthens the adaptive immune system. The alternative complement pathway acts as an amplification loop that enhances other complement pathways. Isoform MASP-3 specifically catalyzes cleavage and activation of factor D (CFD), the protease that initiates the alternative complement pathway.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QE59", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE59#function" }, { "database": "UniProtKB", "id": "ARBA00094435", "url": "https://www.uniprot.org/uniprotkb/ARBA00094435#function" }, { "database": "UniProtKB", "id": "A0A8D1G1R7", "url": "https://www.uniprot.org/uniprotkb/A0A8D1G1R7#function" } ] }, { "annotation": "Serine protease that activates the lectin pathway of the complement system, a cascade of proteins that leads to phagocytosis and breakdown of pathogens and signaling that strengthens the adaptive immune system. The lectin complement system is activated following association of lectins, such as MBL2, FCN1, FCN2 or FCN3, to carbohydrates on the pathogen surface. 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"MFGQIQSPGYPDSYPSDSEVTWNITVPEGFRIKLYFMHFNLESSYLCEYDYVKVETEDQVLATFCGKETTDTEQTPGQEVVFSPGSFMSITFRSDFSNEERYTGFDAHYMAVDVDECTEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVECSDNLFTQRTGVITSPDYPSPYPKSSECLYTIELEEGFMVSLQFEDIFDIEDHPEVSCPYDYIKIKAGPKLLGPFCGEKAPEPINTQSHSIQIQFRSDNSGENRGWRLLYRATGNECPKLQPPVHGKIEPLQAKYSFKDQVLISCDTGYKVLKDNVEMDVFQIECLKDGTWSNKIPTCKIADCGTPAKLENGLVTFSTRNNLTTYKSEIIYSCQQPYYKMLHSTTGVYTCSAQGVWMNEVLGKSQPTCLPVCGQPSRSLPNLVKRIIGGRNAEPGLFPWQALIVVEDTSRVPNDKWFGSGALLSESWILTAAHVLRSQRRDNTVTPVSKEHVTVYLGLHDVRDKSGAVNSSAARVVLHPDFDIQNYNHDIALVQLQEPVPLGPHVMPVCLPRPEPEGPAPHMLGLVAGWGISNPNVTVDEIISSGTRTLSDVLQYVKLPVVPHAECKTSYESRSGNYSVTENMFCAGYYEGGKDTCLGDSGGAFVILDDLSQRWVAQGLVSWGGPEECGSKQVYGVYTKVSNYVDWVWEQMGSPPGLGELQVER", "length": 702, "header": "tr|A0A8D1G1R7-1|A0A5G2QE59_PIG Computationally mapped isoform of Complement C1s subcomponent OS=Sus scrofa OX=9823 GN=MASP1 PE=4 SV=1 CANONICAL=A0A5G2QE59-1" }, "locus": { "chromosome": "13", "start_pos": 125020492, "end_pos": 124980309, "strand": "+", "evidence": [ { 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} ] } }, { "isoform_ac": "A0A4X1VZI2-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZI2/entry", "sequence": { "sequence": "MKDVPGFLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKLNIGDLQVTKETIEDVEEMLSSLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCVDIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRDTDRQWLIDTLYAFNSGNVERFQTLKTAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKITVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIRGMKDRLEFWCTDVKSMEMLVEHQAHDILT", "length": 376, "header": "tr|A0A4X1VZI2-1|A0A4X1VZI2_PIG Isoform 1 of 26S proteasome non-ATPase regulatory subunit 13 OS=Sus scrofa OX=9823 GN=PSMD13 PE=1 SV=1 CANONICAL=A0A4X1VZI2-1" }, "locus": { "chromosome": "2", "start_pos": 68499, "end_pos": 55197, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000015909.5", "url": "https://www.ensembl.org/id/ENSSSCT00000015909.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000015489.2", "url": 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"MKDVPGFLQQSQNSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKLNIGDLQVTKETIEDVEEMLNNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCVDIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRNTDRQWLIDTLYAFNSGNVERFQTLKTAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKITVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFWCTDVKSMEMLVEHQAHDILT", "length": 376 }, "evidence": [ { "id": "A0A4X1VZI2", "url": "https://omabrowser.org/oma/group/A0A4X1VZI2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9WVJ2-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 13", "gene_name": "Psmd13", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKDVPAFLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLEVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKLNIGDLQATKETIEDVEEMLNNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCVDIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRDTDRQWLIDTLYAFNSGAVDRFQTLKCAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKITVNKVELLVMKALSVGLVRGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLELWCTDVKSMEMLVEHQAQDILT", "length": 376 }, "evidence": [ { "id": "A0A4X1VZI2", "url": "https://omabrowser.org/oma/group/A0A4X1VZI2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "proteasome complex", "id": "GO:0000502", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000502", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VZI2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZI2" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VZI2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZI2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VZI2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZI2" } ], "pmid": "" }, { "name": "proteasome regulatory particle, lid subcomplex", "id": "GO:0008541", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008541", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VZI2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZI2" } ], "pmid": "" }, { "name": "proteasome regulatory particle", "id": "GO:0005838", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005838", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VZI2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZI2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "structural molecule activity", "id": 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"field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1VVI2-1", "uniprot_ac": "A0A4X1VVI2", "uniprot_id": "A0A4X1VVI2_PIG", "mass": { "chemical_mass": 34908.0, "monoisotopic_mass": 34908.0 }, "refseq": {}, "gene_names": [ { "name": "OR10Z1", "type": "recommended", "evidence": [ { "id": "A0A4X1VVI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVI2" } ] } ], "protein_names": [ { "name": "Olfactory receptor", "type": "recommended", "evidence": [ { "id": "A0A4X1VVI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVI2/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Putative odorant or sperm cell receptor.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VVI2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVI2#function" }, { "database": "UniProtKB", "id": "ARBA00003929", "url": "https://www.uniprot.org/uniprotkb/ARBA00003929#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VVI2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVI2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "OR10Z1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVI2", "locus": { "chromosome": "4", "start_pos": 91643676, "end_pos": 91644614, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000006447", "url": "https://www.ensembl.org/id/ENSSSCG00000006447" } ] } } ], "crossref": [ { "id": "A0A4X1VVI2", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VVI2", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd15225", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd15225", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000276", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000276", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000725", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000725", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "RMNPTLC", "url": "https://omabrowser.org/oma/group/RMNPTLC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VVI2", "url": "https://www.orthodb.org/?gene=A0A4X1VVI2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR26453", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR26453", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13853", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13853", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A4X1VVI2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVI2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VVI2-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVI2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGQTNATFWTGFVFLGFSSFGELQPLLFALFLSLYLVTLTSNVFIIVVIRLDSHLHTPMYLFLSFLSFSETCYTLGIIPRMLSSLVRGRQDISYVGCAVQMFFSASWACTNCFLLAVMGFDRYVAICAPLHYASRMNPSLCAQLVGTSFLSGYLFGLGMTLVIFHLPFCRSHEIQHFFCDTPPVLSLACGDTSLSELGILLLSLLVLLVSFSFIAVSYTYILAAILRIPSTEGRKKAFSTCASHLTVVIVHYGCASFMYLRPKTIYSLKRDQLIAVTYTVVTPLLNPIIYSLRNRAVQTALRNAFRRRLLSK", "length": 312, "header": "tr|A0A4X1VVI2-1|A0A4X1VVI2_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN=OR10Z1 PE=3 SV=1 CANONICAL=A0A4X1VVI2-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VVI2-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVI2/entry", "sequence": { "sequence": "MGQTNATFWTGFVFLGFSSFGELQPLLFALFLSLYLVTLTSNVFIIVVIRLDSHLHTPMYLFLSFLSFSETCYTLGIIPRMLSSLVRGRQDISYVGCAVQMFFSASWACTNCFLLAVMGFDRYVAICAPLHYASRMNPSLCAQLVGTSFLSGYLFGLGMTLVIFHLPFCRSHEIQHFFCDTPPVLSLACGDTSLSELGILLLSLLVLLVSFSFIAVSYTYILAAILRIPSTEGRKKAFSTCASHLTVVIVHYGCASFMYLRPKTIYSLKRDQLIAVTYTVVTPLLNPIIYSLRNRAVQTALRNAFRRRLLSK", "length": 312, "header": "tr|A0A4X1VVI2-1|A0A4X1VVI2_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN=OR10Z1 PE=3 SV=1 CANONICAL=A0A4X1VVI2-1" }, "locus": { "chromosome": "4", "start_pos": 91644614, "end_pos": 91643679, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007061.4", "url": "https://www.ensembl.org/id/ENSSSCT00000007061.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000006870.2", "url": "https://www.ensembl.org/id/ENSSSCP00000006870.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VVI2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVI2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "E9Q0Y7-1", "protein_name": "Olfactory receptor", "gene_name": "Or10z1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVESNVTCWQGFVFLGFSSFGELQLLLFVLFLSLYLVTITSNVFIIIVIRLDSHLHTPMYLFLSFLSFSETCYTLGIIPRMLSGLVMGGQAISFMGCATQMFFSASWACTNCFLLSVMGFDRYVAICAPLHYASRMNPTVCAQLVGTSFLSGYLFGLGMTLVIFRLSFCSSHEIQHFFCDTPPVLSLACGDTRLSELGILILSLLVLLVSFFLISVSYAYILVAILRIPSAEGRRKAFSTCASHLTVVVIHYGCASFMYLRPKASYSLERDQLIAVTYTVATPLLNPIVYSLRNRAVQTALRNAFRGSLLGKG", "length": 313 }, "evidence": [ { "id": "A0A4X1VVI2", "url": "https://omabrowser.org/oma/group/A0A4X1VVI2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3H6N2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100750377", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAQDNVTCWKGFVFLGFSSFGELQLLLFVLFLSLYLVTITSNVFIIIVIRLDSHLHTPMYLFLSFLSFSETCYTLGIIPRMLSGLVMGGQAISFLGCATQMFFSASWACTNCFLLSVMGFDRYVAICAPLHYASRMNPTLCAQLVGTSFLSGYLFGLGMTLVIFRLSFCSSHEIQHFFCDTPPVLSLACGDTRLSELGILILSLLVLLVSFFLISVSYAYILVAILRIPSAEGRRKAFSTCASHLTVVVIHYGCASFMYLRPKASYSLERDQLIAVTYTVATPLLNPIVYSLRNRAVQSALRNAFRGSLLRKG", "length": 313 }, "evidence": [ { "id": "A0A4X1VVI2", "url": "https://omabrowser.org/oma/group/A0A4X1VVI2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8NGY1-1", "protein_name": "Olfactory receptor 10Z1", "gene_name": "OR10Z1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"A0A4X1VW08-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VW08-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGCPPPAAVWIWTFLLLLLEASAGHLRAQEPKVLEGQECQAHSQPWQTALFQGVRLLCGGVLIDDHWVLTAAHCKKEKYTVHLGEHSLQNKDGPEQKMSVAQSIPHPCYNSSSEDRSHDLMLVRLRGRASLGPKVKPIKLADHCPQAGQKCTISGWGTITSPQENFPDALNCAQVKIVSQKLCEDAYPGRVTDSMVCAGDISGADTCQGDSGGPLVCDGVLQGITSWGSDPCGRPEKPGVYTKICRYLDWIKKTMSRRA", "length": 259, "header": "tr|A0A4X1VW02-1|A0A4X1VW02_PIG Isoform 1 of tissue kallikrein OS=Sus scrofa OX=9823 GN=KLK8 PE=3 SV=1 CANONICAL=A0A4X1VW02-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VW02-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VW02/entry", "sequence": { "sequence": "MGCPPPAAVWIWTFLLLLLEASAGHLRAQEPKVLEGQECQAHSQPWQTALFQGVRLLCGGVLIDDHWVLTAAHCKKEKYTVHLGEHSLQNKDGPEQKMSVAQSIPHPCYNSSSEDRSHDLMLVRLRGRASLGPKVKPIKLADHCPQAGQKCTISGWGTITSPQENFPDALNCAQVKIVSQKLCEDAYPGRVTDSMVCAGDISGADTCQGDSGGPLVCDGVLQGITSWGSDPCGRPEKPGVYTKICRYLDWIKKTMSRRA", "length": 259, "header": "tr|A0A4X1VW02-1|A0A4X1VW02_PIG Isoform 1 of tissue kallikrein OS=Sus scrofa OX=9823 GN=KLK8 PE=3 SV=1 CANONICAL=A0A4X1VW02-1" }, "locus": { "chromosome": "6", "start_pos": 55660586, "end_pos": 55655489, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048544.3", "url": "https://www.ensembl.org/id/ENSSSCT00000048544.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032587.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032587.2" } ] } }, { "isoform_ac": "A0A4X1VW08-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VW08/entry", "sequence": { "sequence": "MGCPPPAAVWIWTFLLLLLEASAENFPDALNCAQVKIVSQKLCEDAYPGRVTDSMVCAGDISGADTCQGDSGGPLVCDGVLQGITSWGSDPCGRPEKPGVYTKICRYLDWIKKTMSRRA", "length": 119, "header": "tr|A0A4X1VW08-1|A0A4X1VW02_PIG Computationally mapped isoform of tissue kallikrein OS=Sus scrofa OX=9823 GN=KLK8 PE=3 SV=1 CANONICAL=A0A4X1VW02-1" }, "locus": { "chromosome": "6", "start_pos": 55660586, "end_pos": 55655489, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068896.2", "url": "https://www.ensembl.org/id/ENSSSCT00000068896.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061876.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061876.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VW08", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VW08" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:110261027", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110261027", "resource": "KEGG Pathway" }, { "id": "R-SSC-6809371", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6809371", "resource": "Reactome", "description": "Formation of the cornified envelope" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "serine-type endopeptidase activity", "id": "GO:0004252", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004252", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VW02", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VW02" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VW02", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VW02" } ], "pmid": "" }, { "name": "secretory granule", "id": "GO:0030141", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030141", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VW02", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VW02" } ], "pmid": "" }, { "name": "serine protease inhibitor complex", "id": "GO:0097180", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097180", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VW02", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VW02" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 7, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VW02", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VW02" } ], "pmid": "" }, { "name": "memory", "id": "GO:0007613", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007613", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VW02", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VW02" } ], "pmid": "" }, { "name": "neuron projection morphogenesis", "id": "GO:0048812", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048812", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VW02", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VW02" } ], "pmid": "" }, { "name": "response to wounding", "id": "GO:0009611", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009611", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VW02", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VW02" } ], "pmid": "" }, { "name": "protein maturation", "id": "GO:0051604", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051604", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VW02", "url": 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The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "extracellular region", "input_participant_list": [ "R-SSC-8850832" ], "output_participant_list": [ "R-SSC-8850829", "R-SSC-8850833" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-8850831", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8850831" } ] } ], "reaction_participants": [ { "participant_id": "R-SSC-8850829", "participant_name": "KLK8 [extracellular region]", "crossref": [ { "id": "ENSSSCT00000048544", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCG00000034400", "database": "ENSEMBL", "url": "" }, { "id": "A0A4X1VW02", "database": "UniProt", "url": "" }, { "id": "ENSSSCP00000032587", "database": "ENSEMBL", "url": "" }, { "id": "XP_020950493.1", "database": "RefSeq", "url": "" } ] }, { "participant_id": "R-SSC-8850832", "participant_name": "KLK8 [extracellular region]", "crossref": [ { "id": "A0A4X1VW02", "database": "UniProt", "url": "" }, { "id": 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"database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q17QW2-1", "protein_name": "Transmembrane protein 39B", "gene_name": "TMEM39B", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGGRRGPNRTSYCRNPLCEPGSSGGSGGGHTSSASVTSVRSRTRSSSGTGLSSPPLATQTVVPLQHCKIPELPVQASILFELQLFFCQLIALFVHYINIYKTVWWYPPSHPPSHTSLNFHLIDFNLLMVTTIVLGRRFIGSIVKEASQRGKVTLFRSILLFLTRFTVLTATGWSLCRSLIHLFRTYSFLNLLFLCYPFGMYIPFLQLNCDLRKTNLFSHVASMGPREAVSGLARSRDYLLTLRETWKQHTKQLYGPDAMPTHACCLSPSLIRSEVEFLKMDFNWRMKEVLVSAMLSAYYVAFVPVWFVKNTHYYDKRWSCELFLLVSISTSVILMQHLLPASYCDLLHKAAAHLGCWQKVDPALCSNVLQHPWTEECMWPQGVLVKHSKNVYKAVGHYNVAIPSDVSHFRFHFFFSKPLRILNILLLLEGAVIVYQLYSLMSSDKWHQTISLALILFSNYYAFFKLLRDRLVLGKAYSYSANSQRDLDHRFS", "length": 492 }, "evidence": [ { "id": "A0A4X1VYB0", "url": "https://omabrowser.org/oma/group/A0A4X1VYB0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q66H44-1", "protein_name": "Transmembrane protein 39B", "gene_name": "Tmem39b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGGRRGPNRTSYYRNPLCEPGSSGASGGGHSSSASVSSVRSRSRTTSGTGLSSPPLAAQTVVPLQHCKIPELPVQASILFELQLFFCQLIALFVHYINIYKTVWWYPPSHPPSHTSLNFHLIDFNLLMVTTIVLGRRFIGSIVKEASQRGKVSLFRSILLFLTRFTVLTATGWSLCRSLIHLFRTYSFLNLLFLCYPFGMYIPFLQLNYDLRKTNLFSHVASMGPREAVSGLARSRDYFLTLRETWKQHTRQLYGPEAMPTHACCLSPSLIRNEVEFLKMDFNWRMKEVLVSSMLSAYYVAFVPVWFVKNTHYYDKRWSCELFLLVSISTSVILMQHLLPASYCDLLHKAAAHLGCWQKVDPALCSNVLQHPWTEECMWPQGVLVKHSKNVYKALGHYNVAIPSDVSHFRFHFFFSNPLRILNILLLLEGAVIVYQLYSLMSSEKWHQTISLALILFSNYYAFFKLLRDRLVLGKAYSYSASPQRDLDHRFS", "length": 492 }, "evidence": [ { "id": "A0A4X1VYB0", "url": "https://omabrowser.org/oma/group/A0A4X1VYB0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7ZW11-1", "protein_name": "Transmembrane protein 39B", "gene_name": "tmem39b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAGGRRGANRTTYCRSPLSNDTGSVGNGNHSTSSPVTGVRSRTRNGSGTGMSSPPLATQTVVPLKHCKIPELSMDKNVLFELHLFACHLIALFVHYVNIYKTVWWYPPSHPPSHTSLNFHLIDYNMLVFTVIVLARRLIAAIVKEASQSGKLSFPHSVFLVTARFAVLTLAGWSLCRSLIYLFKTYSVLSLLFLCYPFGMYIPFFRLSCDFRRAGSMSPLSGIGSKDVGAAALGRGGRDYLSVLKETWKQHTSQLYSAQPMPTHACCLSPDLIRKEVEYLKMDFNWRMKEVLVSSMLSAYYVAFVPVWFVKSTQYVDKRWSCELFILVSVSTSVILMRHLLPPRYCDLLHKAAAHLGCWQKVDPSLCSNVLQHIWTEEYMWPQGVLVKHSKNVYKAMGHYNVAVPSDVSHYRFYFFFNKPLRILNILIILEGAMIFYQLYSLMCSEKWHQTISLALILFSNYYAFFKLLRDRIVLGKAYSYSASASNQKVS", "length": 491 }, "evidence": [ { "id": "A0A4X1VYB0", "url": "https://omabrowser.org/oma/group/A0A4X1VYB0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q810L4-1", "protein_name": "Transmembrane protein 39B", "gene_name": "Tmem39b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGGRRGPNRTSYYRNPLCEPGSSGASGGGHSSSASVSSVRSRSRTTSGTGLSSPPLAAQTVVPLQHCKIPELPVQASILFELQLFFCQLIALFVHYINIYKTVWWYPPSHPPSHTSLNFHLIDFNLLMVTAIVLGRRFIGSIVKEASQRGKVSLFRSILLFLTRFTVLTATGWSLCRSLIHLFRTYSFLNLLFLCYPFGMYIPFLQLNYDLRKTNLFTHMASMGPREAVSGLARSRDYFLTLRETWKQHTRQLYGPEAMPTHACCLSPSLIRNEVEFLKMDFNWRMKEVLVSSMLSAYYVAFVPVWFVKNTHYYDKRWSCELFLLVSISTSVILMQHLLPASYCDLLHKAAAHLGCWQKVDPALCSNVLQHPWTEECMWPQGVLVKHSKNVYKAVGHYNVAIPSDVSHFRFHFFFSNPLRILNILLLLEGAVIVYQLYSLMSSEKWHQTISLALILFSNYYAFFKLLRDRLVLGKAYSYSASPQRDLDHRFS", "length": 492 }, "evidence": [ { "id": "A0A4X1VYB0", "url": "https://omabrowser.org/oma/group/A0A4X1VYB0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9GZU3-1", "protein_name": "Transmembrane protein 39B", "gene_name": "TMEM39B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGGRRGPNRTSYCRNPLCEPGSSGGSSGSHTSSASVTSVRSRTRSSSGTGLSSPPLATQTVVPLQHCKIPELPVQASILFELQLFFCQLIALFVHYINIYKTVWWYPPSHPPSHTSLNFHLIDFNLLMVTTIVLGRRFIGSIVKEASQRGKVSLFRSILLFLTRFTVLTATGWSLCRSLIHLFRTYSFLNLLFLCYPFGMYIPFLQLNCDLRKTSLFNHMASMGPREAVSGLAKSRDYLLTLRETWKQHTRQLYGPDAMPTHACCLSPSLIRSEVEFLKMDFNWRMKEVLVSSMLSAYYVAFVPVWFVKNTHYYDKRWSCELFLLVSISTSVILMQHLLPASYCDLLHKAAAHLGCWQKVDPALCSNVLQHPWTEECMWPQGVLVKHSKNVYKAVGHYNVAIPSDVSHFRFHFFFSKPLRILNILLLLEGAVIVYQLYSLMSSEKWHQTISLALILFSNYYAFFKLLRDRLVLGKAYSYSASPQRDLDHRFS", "length": 492 }, "evidence": [ { "id": "A0A4X1VYB0", "url": "https://omabrowser.org/oma/group/A0A4X1VYB0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYB0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYB0" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYB0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYB0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 8, "end_pos": 10, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 8, "end_pos": 10 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", 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"title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1VYM7-1", "uniprot_ac": "A0A4X1VYM7", "uniprot_id": "A0A4X1VYM7_PIG", "mass": { "chemical_mass": 109027.0, "monoisotopic_mass": 109027.0 }, "refseq": { "ac": "XP_020951588", "name": "thyroid hormone receptor-associated protein 3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020951588" }, "gene_names": [ { "name": "THRAP3", "type": "recommended", "evidence": [ { "id": "A0A4X1VYM7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYM7" } ] }, { "name": "THRAP3", "type": "synonym", "evidence": [ { "id": "XP_020951588", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020951588" } ] } ], "protein_names": [ { "name": "Thyroid hormone receptor associated protein 3", "type": "synonym", "evidence": [ { "id": "A0A4X1VYM7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYM7/entry#names_and_taxonomy" } ] }, { "name": "thyroid hormone receptor-associated protein 3", "type": "synonym", "evidence": [ { "id": "XP_020951588", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020951588" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYM7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYM7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "THRAP3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYM7", "locus": { "chromosome": "6", "start_pos": 92412330, "end_pos": 92355667, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000029954", "url": "https://www.ensembl.org/id/ENSSSCG00000029954" } ] } } ], "crossref": [ { "id": "ENSSSCG00000029954", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000029954", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100627402", "url": "https://www.ncbi.nlm.nih.gov/gene/100627402", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR029199", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029199", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100627402", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627402", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "GEGTDKW", "url": "https://omabrowser.org/oma/group/GEGTDKW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VYM7", "url": "https://www.orthodb.org/?gene=A0A4X1VYM7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15268", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15268", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15268:SF16", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15268:SF16", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15440", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15440", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020951588", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020951588", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VYM7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYM7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VYM7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYM7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SV47", "url": "https://www.uniprot.org/uniprotkb/F1SV47", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SV47-1", "url": "https://www.uniprot.org/uniprotkb/F1SV47-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSKTNKSKSGSRSSRSRSASRSRSRSFSKSRSRSRSVSRSRKRRLSSRSRSRSYSPAHNRERNHPRVYQNRDFRGHNRGYRRPYYFRGRNRGFYPWGQYNRGGYGNYRSNWQNYRQAYSPRRGRSRSRSPKRRSPSPRSRSHSRNSDKSSSDRSRRSSSSRSSSNHSRVESSKRKSTKEKKSSSKDSRPSQAAGDNQGDEAKDQTFSGGTSQDTKASESSKPWPDATTYSAGSTSRASAVSEMSPRERSPALKSPLQSVVVRRRSPRPSPVPKPSPPLSSTSQMGSTLQSGAGYQAGTHQGQFDHGSGSLSPSKKSPVGKSPPATGSTYGSSQKEEGAAPGGAAYTKRYLDEQKTENGKDKEQKQTNTDKEKMKEKGSFSDAGLGDTKVKSDPFAPKTDTEKPFRGSQSPKRYKLRDDFEKKMADFHKEELDDQDKDKAKGRKESEFDDEPKYMSKVIAGTNKNQEEEKSGKWEGLVYAPPGKEKQRKTEELEEESFSERSKKEDRGGPKRTESGHRGFVPEKNFRVTAYKAVQEKSSSPPPRKTSESREKLGAKGDFSTGKSSFSITREAQVNVRMDSFDEDLARPSGLLAQERKLCRDLVHSNKKEQEFRSIFQHIQSAQSQRSPSELFAQHIVTIVHHVKEHHFGSSGMTLHERFTKYLKRGTEQEAAKNKKSPEIHRRIDISPSTFRKHGLAHDEMKSPREPGYKAEGKYKDDPVDLRLDIERRKKHKERDLKRGKSRESVDSRDSSHSRERSAEKTEKTHKGSKKQKKHRRARDRSRSSSSSSQSSHSYKAEEYTEETEEREESTTGFDKSRLGTKDFVGPSERGGRARGTFQFRARGRGWGRGNYSGNNNNSSNNDFQKRNREEEWDPEYTPKSKKYYLHDDREGEGSEKWVSRGRGRGAFPRGRGRFMFRKSSTSPKWAHDKFSGEEGEIEDDESGTENREEKDNLQPTTE", "length": 958, "header": "tr|A0A4X1VYM7-1|A0A4X1VYM7_PIG Isoform 1 of Thyroid hormone receptor associated protein 3 OS=Sus scrofa OX=9823 GN=THRAP3 PE=1 SV=1 CANONICAL=A0A4X1VYM7-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VYM7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYM7/entry", "sequence": { "sequence": "MSKTNKSKSGSRSSRSRSASRSRSRSFSKSRSRSRSVSRSRKRRLSSRSRSRSYSPAHNRERNHPRVYQNRDFRGHNRGYRRPYYFRGRNRGFYPWGQYNRGGYGNYRSNWQNYRQAYSPRRGRSRSRSPKRRSPSPRSRSHSRNSDKSSSDRSRRSSSSRSSSNHSRVESSKRKSTKEKKSSSKDSRPSQAAGDNQGDEAKDQTFSGGTSQDTKASESSKPWPDATTYSAGSTSRASAVSEMSPRERSPALKSPLQSVVVRRRSPRPSPVPKPSPPLSSTSQMGSTLQSGAGYQAGTHQGQFDHGSGSLSPSKKSPVGKSPPATGSTYGSSQKEEGAAPGGAAYTKRYLDEQKTENGKDKEQKQTNTDKEKMKEKGSFSDAGLGDTKVKSDPFAPKTDTEKPFRGSQSPKRYKLRDDFEKKMADFHKEELDDQDKDKAKGRKESEFDDEPKYMSKVIAGTNKNQEEEKSGKWEGLVYAPPGKEKQRKTEELEEESFSERSKKEDRGGPKRTESGHRGFVPEKNFRVTAYKAVQEKSSSPPPRKTSESREKLGAKGDFSTGKSSFSITREAQVNVRMDSFDEDLARPSGLLAQERKLCRDLVHSNKKEQEFRSIFQHIQSAQSQRSPSELFAQHIVTIVHHVKEHHFGSSGMTLHERFTKYLKRGTEQEAAKNKKSPEIHRRIDISPSTFRKHGLAHDEMKSPREPGYKAEGKYKDDPVDLRLDIERRKKHKERDLKRGKSRESVDSRDSSHSRERSAEKTEKTHKGSKKQKKHRRARDRSRSSSSSSQSSHSYKAEEYTEETEEREESTTGFDKSRLGTKDFVGPSERGGRARGTFQFRARGRGWGRGNYSGNNNNSSNNDFQKRNREEEWDPEYTPKSKKYYLHDDREGEGSEKWVSRGRGRGAFPRGRGRFMFRKSSTSPKWAHDKFSGEEGEIEDDESGTENREEKDNLQPTTE", "length": 958, "header": "tr|A0A4X1VYM7-1|A0A4X1VYM7_PIG Isoform 1 of Thyroid hormone receptor associated protein 3 OS=Sus scrofa OX=9823 GN=THRAP3 PE=1 SV=1 CANONICAL=A0A4X1VYM7-1" }, "locus": { "chromosome": "6", "start_pos": 92410956, "end_pos": 92390741, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031573.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031573.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023804.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023804.2" } ] } }, { "isoform_ac": "F1SV47-1", "url": "https://www.uniprot.org/uniprotkb/F1SV47/entry", "sequence": { "sequence": "MSKTNKSKSGSRSSRSRSASRSRSRSFSKSRSRSRSVSRSRKRRLSSRSRSRSYSPAHNRERNHPRVYQNRDFRGHNRGYRRPYYFRGRNRGFYPWGQYNRGGYGNYRSNWQNYRQAYSPRRGRSRSRSPKRRSPSPRSRSHSRNSDKSSSDRSRRSSSSRSSSNHSRVESSKRKSTKEKKSSSKDSRPSQAAGDNQGDEAKDQTFSGGTSQDTKASESSKPWPDATTYSAGSTSRASAVSEMSPRERSPALKSPLQSVVVRRRSPRPSPVPKPSPPLSSTSQMGSTLQSGAGYQAGTHQGQFDHGSGSLSPSKKSPVGKSPPATGSTYGSSQKEEGAAPGGAAYTKRYLDEQKTENGKDKEQKQTNTDKEKMKEKGSFSDAGLGDTKVKSDPFAPKTDTEKPFRGSQSPKRYKLRDDFEKKMADFHKEELDDQDKDKAKGRKESEFDDEPKYMSKVIAGTNKNQEEEKSGKWEGLVYAPPGKEKQRKTEELEEESFSERSKKEDRGGPKRTESGHRGFVPEKNFRVTAYKAVQEKSSSPPPRKTSESREKLGAKGDFSTGKSSFSITREAQVNVRMDSFDEDLARPSGLLAQERKLCRDLVHSNKKEQEFRSIFQHIQSAQSQRSPSELFAQHIVTIVHHVKEHHFGSSGMTLHERFTKYLKRGTEQEAAKNKKSPEIHRRIDISPSTFRKHGLAHDEMKSPREPGYKAEGKYKDDPVDLRLDIERRKKHKERDLKRGKSRESVDSRDSSHSRERSAEKTEKTHKGSKKQKKHRRARDRSRSSSSSSQSSHSYKAEEYTEETEEREESTTGFDKSRLGTKDFVGPSERGGRARGTFQFRARGRGWGRGNYSGNNNNSSNNDFQKRNREEEWDPEYTPKSKKYYLHDDREGEGSEKWAYVETLAERFNLGDFDS", "length": 914, "header": "tr|F1SV47-1|A0A4X1VYM7_PIG Computationally mapped isoform of Thyroid hormone receptor associated protein 3 OS=Sus scrofa OX=9823 GN=THRAP3 PE=1 SV=4 CANONICAL=A0A4X1VYM7-1" }, "locus": { "chromosome": "6", "start_pos": 92411473, "end_pos": 92390741, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004032.5", "url": "https://www.ensembl.org/id/ENSSSCT00000004032.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000003941.4", "url": "https://www.ensembl.org/id/ENSSSCP00000003941.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SV47", "url": "https://www.uniprot.org/uniprotkb/F1SV47" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100627402", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627402", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1NI32-1", "protein_name": "Thyroid hormone receptor associated protein 3", "gene_name": "THRAP3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSKTNKSKSGSRSSRSRSASRSRSRSFSKSRSRSRSVSRSRKRRLSSRSRSRSYSPAHNRERNHPRVYQNRDFRGHNRGYRRPYYFRGRNRGFYPWGQYNRGGYGNYRSNWQNYRQAYSPRRGRSRSRSPKRRSPSPRSRSHSRNSDKSSSDRSRRSSSSRSSSNHSRVESSKRKSAKEKKSSSKDSRPSQAAGDNQGDEAKEQPFSGGTSQDPKASESSKPWPDATTYSAGSASRASGVSELSPRERSPALKSPLQSVVVRRRSPRPSPVPKPSPPLSSTSQMGSTLQSGAGYQGGTHQGQFDHGSGSLSPSKKSPVGKSPPATGSTYGSSQKEEAAAPGGAAYTKRYLDEQKTENGKDKEQKQTNTDKEKMKEKGSFSDTGLGDTKMKSDSFAPKTDTEKPFRGSQSPKRYKLRDDFEKKMADFHKEEMDDQDKDKAKGRKESEFDDEPKFMSKVIAGASKNQEEEKSGKWEGLVYAPPGKEKQRKTEELEEESFSERSKKEERGGSKRSESGHRGFVPEKNFRVTAYKAVQEKSSSPPPRKTSESREKLGAKGDFSTGKSSFSITREAQVNVRMDSFDEDLARPSGLLAQERKLCRDLVHSNKKEQEFRSIFQHIQSAQSQRSPSELFAQHIVTIVHHVKEHHFGSSGMTLHERFTKYLKRGSEQEAAKNKKSPEIHRRIDISPSTFRKHGLAHDEMKSPREPGYKAEGKYKDDPVDLRLDIERRKKHKERDLKRGKSRESVDSRDSSHSRERSAEKTEKTHKGSKKQKKHRRARDRSRSSSSSSQSSHSYKAEEYTEETEEREESTTGFDKSRLGTKDFVGPSERGGRARGTFQFRARGRGWGRGNYSGNNNNSSNNDFQKRSREEEWDPEYTPKSKKYYLHDDREGEGSEKWVSRGRGRGAFPRGRGRFMFRKSSTSPKWAHDKFSGEEGEIEDDESGTENREEKDNLQPTTE", "length": 958 }, "evidence": [ { "id": "A0A4X1VYM7", "url": "https://omabrowser.org/oma/group/A0A4X1VYM7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0AB32TCL0-1", "protein_name": "Thyroid hormone receptor-associated protein 3b isoform X1", "gene_name": "thrap3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MADLLTHSVQKTTLGYAEMSKPPNSASRSRSRSRSRTRSRTYSRSHSRSRSRSRSRKRRYSSRSRSRSHSRERNYPSRDFQGNRGYNRGFRGYRRPFQYNRGRGRGFFPRGNYHRGGSNYGYRSNNWHGHRDQQQPYDHSYSPRRGRSRSHSPRKRSPSRSRSRHSNRSSSGRSRRSSSSSHSRSPRPRNSSTGRPHSKDGKDRGSPGESKGAAKEASKPTGSPPEESGKWEGMTDYDASPKRTAASAGPSDIKVSLSGNSGNGGSLWRSIGPASKSPPAKTSTSTGFGFFSKEDMKTEDKSASISTAFKKFLAEKKKPSDRDNGRGESLSLGEADNEKSGSKSRSTFNTSDSPYDGSKTDKVLPFLDPEEEEYRQELKERKAEEETKYKEKTLVTMRDLTEERFGKWDDSVYLSSKESSRRDEDVEEELDEELYRSRKHASRKEEKAAKKKEKKKSRISCSPSSPPSSGGRPLFPVVREASPPVKSSAKKEPQFNFSIKAFTGDGEGSSGALTKERRLSRDLVHPGKKDQDDFRSIFQHIQSAQLRRSPSELFAQHIVTIVHHIKAQHFKSSGMTLNERFGIYQRKAAEVEMMKPKKSPEIHRRIDVSPSAFKKHSQMFEDFEESGYKDHGKRHEGDSLDLRLAIERRKKDPKREGGKSSAGSRTPSHELSPERSSKQKKSKKSKKKRERSPSSSSSSSSSPSPRPYRGKEYSEEHMEGGFNKARLGSRDYPGPMERGPRDYEGYMERGYERDRGGYDRGGYDRGRGGYDRGFPRMRGRGWNRGNYPGNNPNINPPNMGGPPRPPDEEWDPEYTPKSRKYFQHDDRDKEGEMKWLDTRGRGRGNFPRARGTFMVRKSGGSPKWTHDMFQGNMEEGEIEGGSEHKDEDKPGENPASKP", "length": 898 }, "evidence": [ { "id": "A0A4X1VYM7", "url": "https://omabrowser.org/oma/group/A0A4X1VYM7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1NY54-1", "protein_name": "Thyroid hormone receptor associated protein 3", "gene_name": "THRAP3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSKTNKSKSGSRSSRSRSGSRSRSRSFSKSRSRSRSVSRSRKRRLSSRSRSRSYSPSHNRERNHPRVYQNRDFRGHNRGYRRPYYFRGRNRGFYPWGQYNRGGYGNYRSNWQNYRQAYSPRRGRSRSRSPKRRSPSPRSRSHSRNSDKSSSDRSRRSSSSRSSSNHSRVESSKRKSGKEKKSSSKEARASQAAGDNQGDDSKEQPFSGAAAQDAKASEGSKPWQDVSTYGSSSTSRAAAPELSPRERSPALKSPLQSVVVRRRSPRPSPLQKSSSPLSNPSQMSSASQSSTSFQAGSHQSPFDHGSSGLSPTRKSPVCKSPTPISSMYGTSQKEETTAPGGGAFSKRYLEEQKAENGKDKDQKVTNVEKEKNKEKGNFSEVGSTDGKAKSDSYASKADSEKGYRGSQSPKRYKFRDDFDKPKAPEFHKESHYGKDETDDQEKKEKAKGRKDSDFDDEPKFMSKVVATSSKSQEEDRQGKWEGVVFLPPGKEKQRKSEEMEEESYSERSKKEERPASKRSEPGHRGFVPEKNFRVTTYKTSQEKSSSPPPRKASEVKEKPGSKGDGLAPGKSSFSITREAQVNIRMDSFDEDLARPSGILAQERKLCRDLVHSNKKEQEFRSIFHHIQSAQSQRSPSELFAQHIVTIVHHVREHHFGSSGMTLNERFTKYLKKGMEQEAAKNKKSPEIHRRIDISPSTFRKHGFSQEESKSSRDPGFKAEGKYKDDPVDLRLDIERRKKHKERDLKRDKSRESVESRDSSHSRERSAEKTEKSHKSSKKKKHRRVRERSRSSSSSSRSSHSVKAEEYPEETEEREESTTGFDKSRLGTKEFTGPNERGRARGTFQFRARGRGWGRGNFSGNNNSNSGGNNDFQKRSREEDWDPEYTPKSKKYYLHDDREGEGAEKWVSRGRGRGAFPRGRGRFMFRKSSTSPKWAHDKFSGEEGEIEDDESGTENREDKDSLQSAAE", "length": 966 }, "evidence": [ { "id": "A0A4X1VYM7", "url": "https://omabrowser.org/oma/group/A0A4X1VYM7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q569Z6-1", "protein_name": "Thyroid hormone receptor-associated protein 3", "gene_name": "Thrap3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSKTNKSKSGSRSSRSRSASRSRSRSFSKSRSRSRSVSRSRKRRLSSRSRSRSYSPAHNRERNHPRVYQNRDFRGHNRGYRRPYYFRGRNRGFYPWGQYNRGGYGNYRSNWQNYRQAYSPRRGRSRSRSPKRRSPSPRSRSHSRNSDKSSSDRSRRSSSSRSSSNHSRVESSKRKSTKEKKSSSKDSRPSQAAGDNQGDEAKEQTFSGGTSQDIKGSESSKPWPDATTYGAGSASRASVSDLSPRERSPALKSPLQSVVVRRRSPRPSPVPKPSPPLSNASQMGSSMSGGAGYQSGAHQGQFDHGSGSLSPSKKSPVGKSPPATGSAYGSSQKEESAASGGAAYSKRYLEEQKTENGKDKEQKQTNADKEKLKEKGGFSDADVKMKSDPFAPKTDSEKPFRGSQSPKRYKLRDDFEKKMADFHKEELDEHDKDKSKGRKEPEFDDEPKFMSKVIAGASKNQEEEKSGKWESLHTGKEKQRKAEEMEDEPFTERSRKEERGGSKRSESGHRGFVPEKNFRVTAYKAVQEKSSSPPPRKTSESRDKLGSKGDFSSGKSSFSITREAQVNVRMDSFDEDLARPSGLLAQERKLCRDLVHSNKKEQEFRSIFQHIQSAQSQRSPSELFAQHIVTIVHHVKEHHFGSSGMTLHERFTKYLKRGNEQEAAKNKKSPEIHRRIDISPSTFRKHGLTHEELKSPREPGYKAEGKYKDDPVDLRLDIERRKKHKERDLKRGKSRESVDSRDSSHSRERSTEKTEKTHKGSKKQKKHRRARDRSRSSSSSSQSSHSYKAEEYPEEAEEREESTSGFDKSRLGTKDFVGPNERGGRARGTFQFRARGRGWGRGNYSGNNNNNSNNDFQKRSREEEWDPEYTPKSKKYYLHDDREGEGSDKWMGRGRGRGAFPRGRGRFMFRKSSTSPKWAHDKFSGEEGEIEDDESGTENREEKDSLQPSAE", "length": 951 }, "evidence": [ { "id": "A0A4X1VYM7", "url": "https://omabrowser.org/oma/group/A0A4X1VYM7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5M7V8-1", "protein_name": "Thyroid hormone receptor-associated protein 3", "gene_name": "Thrap3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSKTNKSKSGSRSSRSRSASRSRSRSFSKSRSRSRSVSRSRKRRLSSRSRSRSYSPAHNRERNHPRVYQNRDFRGHNRGYRRPYYFRGRNRGFYPWGQYNRGGYGNYRSNWQNYRQAYSPRRGRSRSRSPKRRSPSPRSRSHSRNSDKSSSDRSRRSSSSRSSSNHSRVESSKRKSTKEKKSSSKDSRPSQAAGDNQGDEAKEQTFSGGTSQDIKGSESSKPWPDATTYGTGSASRASVSDLSPRERSPALKSPLQSVVVRRRSPRPSPVPKPSPPLSNASQMGSSMSGGAGYQSGAHQGPFDHGSGSLSPSKKSPVGKSPPATGSAYGSSQKEESAASGGAAYTKRYLEEQKTENGKDKEQKQTNTDKEKLKEKGGFSDADVKMKSDPFAPKTDTEKPFRGSQSPKRYKLRDDFEKKMADFHKEEMDEQDKDKCKGRKEPEFDDEPKFISKVIAGASKNQEEEKSGKWESLHAGKEKQRKAEELEEEPFTERSRKEERGGSKRSESGHRGFVPEKNFRVTAYKAVQEKSSSPPPRKTSESRDKLGNKGDFSSGKSSFSITREAQVNVRMDSFDEDLARPSGLLAQERKLCRDLVHSNKKEQEFRSIFQHIQSAQSQRSPSELFAQHIVTIVHHVKEHHFGSSGMTLHERFTKYLKRGNEQEAAKTKKSPEIHRRIDISPSTFRKHGLTHEELKSPREPGYKAEGKYKDDPVDLRLDIERRKKHKERDLKRGKSRESVDSRDSSHSRERSTEKTEKTHKGSKKQKKHRRARDRSRSSSSSSQSSHSYKAEEYPEEAEDREESTTGFDKSRLGTKDFVGPNERGGRARGTFQFRARGRGWGRGNYSGNNNNNSNNDFQKRSREEEWDPEYTPKSKKYYLHDDREGEGSDKWMSRGRGRGAFPRGRGRFMFRKSSTSPKWAHDKFSGEEGEIEDDESGTENREEKDSLQPSAE", "length": 951 }, "evidence": [ { "id": "A0A4X1VYM7", "url": "https://omabrowser.org/oma/group/A0A4X1VYM7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9Y2W1-1", "protein_name": "Thyroid hormone receptor-associated protein 3", "gene_name": "THRAP3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSKTNKSKSGSRSSRSRSASRSRSRSFSKSRSRSRSLSRSRKRRLSSRSRSRSYSPAHNRERNHPRVYQNRDFRGHNRGYRRPYYFRGRNRGFYPWGQYNRGGYGNYRSNWQNYRQAYSPRRGRSRSRSPKRRSPSPRSRSHSRNSDKSSSDRSRRSSSSRSSSNHSRVESSKRKSAKEKKSSSKDSRPSQAAGDNQGDEAKEQTFSGGTSQDTKASESSKPWPDATYGTGSASRASAVSELSPRERSPALKSPLQSVVVRRRSPRPSPVPKPSPPLSSTSQMGSTLPSGAGYQSGTHQGQFDHGSGSLSPSKKSPVGKSPPSTGSTYGSSQKEESAASGGAAYTKRYLEEQKTENGKDKEQKQTNTDKEKIKEKGSFSDTGLGDGKMKSDSFAPKTDSEKPFRGSQSPKRYKLRDDFEKKMADFHKEEMDDQDKDKAKGRKESEFDDEPKFMSKVIGANKNQEEEKSGKWEGLVYAPPGKEKQRKTEELEEESFPERSKKEDRGKRSEGGHRGFVPEKNFRVTAYKAVQEKSSSPPPRKTSESRDKLGAKGDFPTGKSSFSITREAQVNVRMDSFDEDLARPSGLLAQERKLCRDLVHSNKKEQEFRSIFQHIQSAQSQRSPSELFAQHIVTIVHHVKEHHFGSSGMTLHERFTKYLKRGTEQEAAKNKKSPEIHRRIDISPSTFRKHGLAHDEMKSPREPGYKAEGKYKDDPVDLRLDIERRKKHKERDLKRGKSRESVDSRDSSHSRERSAEKTEKTHKGSKKQKKHRRARDRSRSSSSSSQSSHSYKAEEYTEETEEREESTTGFDKSRLGTKDFVGPSERGGGRARGTFQFRARGRGWGRGNYSGNNNNNSNNDFQKRNREEEWDPEYTPKSKKYYLHDDREGEGSDKWVSRGRGRGAFPRGRGRFMFRKSSTSPKWAHDKFSGEEGEIEDDESGTENREEKDNIQPTTE", "length": 955 }, "evidence": [ { "id": "A0A4X1VYM7", "url": "https://omabrowser.org/oma/group/A0A4X1VYM7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 7, "go_terms": [ { "name": "positive regulation of mRNA splicing, via spliceosome", "id": "GO:0048026", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048026", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYM7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYM7" } ], "pmid": "" }, { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYM7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYM7" } ], "pmid": "" }, { "name": "mRNA stabilization", "id": "GO:0048255", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048255", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYM7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYM7" } ], "pmid": "" }, { "name": "circadian rhythm", "id": "GO:0007623", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007623", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYM7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYM7" } ], "pmid": "" }, { "name": "nuclear-transcribed mRNA catabolic process", "id": "GO:0000956", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000956", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYM7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYM7" } ], "pmid": "" }, { "name": "positive regulation of circadian rhythm", "id": "GO:0042753", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042753", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYM7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYM7" } ], "pmid": "" }, { "name": "regulation of alternative mRNA splicing, via spliceosome", "id": "GO:0000381", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000381", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYM7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYM7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 6, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYM7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYM7" } ], "pmid": "" }, { "name": "transcription coactivator activity", "id": "GO:0003713", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003713", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYM7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYM7" } ], "pmid": "" }, { "name": "phosphoprotein binding", "id": "GO:0051219", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051219", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYM7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYM7" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYM7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYM7" } ], "pmid": "" }, { "name": "nuclear thyroid hormone receptor binding", "id": "GO:0046966", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046966", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYM7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYM7" } ], "pmid": "" }, { "name": "transcription coregulator activity", "id": "GO:0003712", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003712", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYM7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYM7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYM7", "url": 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Plays a role in the polyspermy inhibition. Probably acts as a protease for the post-fertilization cleavage of ZP2. Cleaves the sperm-binding ZP2 at the surface of the zona pellucida after fertilization and cortical granule exocytosis, rendering the zona pellucida unable to support further sperm binding.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYV5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYV5#function" }, { "database": "UniProtKB", "id": "ARBA00057258", "url": "https://www.uniprot.org/uniprotkb/ARBA00057258#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYV5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYV5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ASTL", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYV5", "locus": { "chromosome": "3", "start_pos": 47070664, "end_pos": 47059040, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008126", "url": "https://www.ensembl.org/id/ENSSSCG00000008126" } ] } } ], "crossref": [ { "id": "A0A4X1VYV5", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VYV5", "database": "AlphaFoldDB", "categories": [] }, { "id": "IPR001506", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001506", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006026", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006026", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR024079", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024079", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "WESPVLK", "url": "https://omabrowser.org/oma/group/WESPVLK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR10127", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10127", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10127:SF855", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10127:SF855", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01400", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01400", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A4X1VYV5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYV5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VYV5-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYV5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MYLSGPGCILGAPSSSRCPGACGTRFAEDLTPEGTQTSWDKDIPAINQGLIPEETPESSFLIEGDILRPSPFRLFSATNNKWPKNGGVVEVPVVLSSKYDKPSRQVILEAFAEFEHFTCIRFVDYEGQRDFISIVPMSGCFSSIGRNGGMQVVSLGPSCLQRGRGIVLHELMHVLGFWHEHSRADRDRYIRVNWNEILPGFEINFIKSRSSNMLVPYDYSSVMHYGRLAFSRRGLPTITPLWAPSVHIGQRWNLSTSDIARVLRLYDCSQSGHDPPKKGFQAHSNGGSPTPASRPYLQQLLKALLTESRSPDDSGFGTEGQRGAAGPEESPRAWKPHALRNFDAEASVKPPEAPASSLRSRPAAGVPGIALEQSWQAQVPTGPPAPSLEGED", "length": 392, "header": "tr|A0A4X1VYV5-1|A0A4X1VYV5_PIG Isoform 1 of Metalloendopeptidase OS=Sus scrofa OX=9823 GN=ASTL PE=4 SV=1 CANONICAL=A0A4X1VYV5-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VYV5-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYV5/entry", "sequence": { "sequence": "MYLSGPGCILGAPSSSRCPGACGTRFAEDLTPEGTQTSWDKDIPAINQGLIPEETPESSFLIEGDILRPSPFRLFSATNNKWPKNGGVVEVPVVLSSKYDKPSRQVILEAFAEFEHFTCIRFVDYEGQRDFISIVPMSGCFSSIGRNGGMQVVSLGPSCLQRGRGIVLHELMHVLGFWHEHSRADRDRYIRVNWNEILPGFEINFIKSRSSNMLVPYDYSSVMHYGRLAFSRRGLPTITPLWAPSVHIGQRWNLSTSDIARVLRLYDCSQSGHDPPKKGFQAHSNGGSPTPASRPYLQQLLKALLTESRSPDDSGFGTEGQRGAAGPEESPRAWKPHALRNFDAEASVKPPEAPASSLRSRPAAGVPGIALEQSWQAQVPTGPPAPSLEGED", "length": 392, "header": "tr|A0A4X1VYV5-1|A0A4X1VYV5_PIG Isoform 1 of Metalloendopeptidase OS=Sus scrofa OX=9823 GN=ASTL PE=4 SV=1 CANONICAL=A0A4X1VYV5-1" }, "locus": { "chromosome": "3", "start_pos": 47070661, "end_pos": 47059040, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008902.4", "url": "https://www.ensembl.org/id/ENSSSCT00000008902.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008676.2", "url": "https://www.ensembl.org/id/ENSSSCP00000008676.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 290, "start_aa": "Thr", "end_pos": 290, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr290", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYV5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYV5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0AAA9SZV8-1", "protein_name": "Metalloendopeptidase", "gene_name": "ASTL", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "TLLPPSLWPQPVEPMWGMTRGHRAPSASHCAGACETRFSEDLTPEETQTSWDKDIPAINQGLIPEESPESSFLLEGDILRPSPFRLFSATSSKWPKNGGVVEVPFLLSSKYDKPSRQVILEAFAEFERFTCIRFVAYDGQRDFISIIPMSGCFSSIGRSGGMQVVSLGPSCLQRGPGIVLHELMHVLGFWHEHSRADRDHYIRVNWNEILPGFEMNFIKSRSSNMLVPYDYSSVMHYGRLAFSRRGLPTITPLWAPSVHIGQRWNLSNSDIARVLRFYDCSPSGHEPSGKGDGISEGQVLGGESVEVSRADQGLTIQMQKKHLKKN", "length": 326 }, "evidence": [ { "id": "A0A4X1VYV5", "url": "https://omabrowser.org/oma/group/A0A4X1VYV5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "D3ZX09-1", "protein_name": "Metalloendopeptidase", "gene_name": "Astl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGGVGSLGSLWPWMLTLLSLTGLILGAPSASRCSGVCSTSVPEGFTPEGSRVSQDKDIPAINQGLISEETPESSFLVEGDIIRPSPFRLLSVTNNKWPKGVDGIVEIPFLLSSKYDEPSRQVIMEAFAEFERFTCIRFVAYRGQRDFVSILPMAGCFSGVGRSGGMQVVSLAPTCLQKGRGIVLHELMHVLGFWHEHSRADRDRYIRVNWNEILPGFEINFIKSRNSNMLAPYDYSSVMHYGRFAFSWRGQPTIIPLWTSSVHIGQRWNLSTSDITRVCRLYSCSPSVPDSHGRGFEAPSDGRSPTPASISHLQRLLEALSEESRSSAPSGSGTGGQGIIAGFVDSQQGWEHPAQSTFSVGALARSPQMLAAASKSRPGAGADSISLEQFQPAQAPAVPPVSFPDARDKPTPIQDAFARLALLPGGCAPGSHIREVPRD", "length": 439 }, "evidence": [ { "id": "A0A4X1VYV5", "url": "https://omabrowser.org/oma/group/A0A4X1VYV5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6HA08-1", "protein_name": "Astacin-like metalloendopeptidase", "gene_name": "ASTL", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEGVGGLWPWVLGLLSLPGVILGAPLASSCAGACGTSFPDGLTPEGTQASGDKDIPAINQGLILEETPESSFLIEGDIIRPSPFRLLSATSNKWPMGGSGVVEVPFLLSSKYDEPSRQVILEALAEFERSTCIRFVTYQDQRDFISIIPMYGCFSSVGRSGGMQVVSLAPTCLQKGRGIVLHELMHVLGFWHEHTRADRDRYIRVNWNEILPGFEINFIKSQSSNMLTPYDYSSVMHYGRLAFSRRGLPTITPLWAPSVHIGQRWNLSASDITRVLKLYGCSPSGPRPRGRGSHAHSTGRSPAPASLSLQRLLEALSAESRSPDPSGSSAGGQPVPAGPGESPHGWESPALKKLSAEASARQPQTLASSPRSRPGAGAPGVAQEQSWLAGVSTKPTVPSSEAGIQPVPVQGSPALPGGCVPRNHFKGMSED", "length": 431 }, "evidence": [ { "id": "A0A4X1VYV5", "url": "https://omabrowser.org/oma/group/A0A4X1VYV5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6HA09-1", "protein_name": "Astacin-like metalloendopeptidase", "gene_name": "Astl", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGIMGSLWPWILTMLSLLGLSMGAPSASRCSGVCSTSVPEGFTPEGSPVFQDKDIPAINQGLISEETPESSFLVEGDIIRPSPFRLLSVTNNKWPKGVGGFVEIPFLLSRKYDELSRRVIMDAFAEFERFTCIRFVAYHGQRDFVSILPMAGCFSGVGRSGGMQVVSLAPTCLRKGRGIVLHELMHVLGFWHEHSRADRDRYIQVNWNEILPGFEINFIKSRSTNMLVPYDYSSVMHYGRFAFSWRGQPTIIPLWTSSVHIGQRWNLSTSDITRVCRLYNCSRSVPDSHGRGFEAQSDGSSLTPASISRLQRLLEALSEESGSSAPSGSRTGGQSIAGLGNSQQGWEHPPQSTFSVGALARPPQMLADASKSGPGAGADSLSLEQFQLAQAPTVPLALFPEARDKPAPIQDAFERLAPLPGGCAPGSHIREVPRD", "length": 435 }, "evidence": [ { "id": "A0A4X1VYV5", "url": "https://omabrowser.org/oma/group/A0A4X1VYV5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "metalloendopeptidase activity", "id": "GO:0004222", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004222", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYV5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYV5" } ], "pmid": "" }, { "name": "zinc ion binding", 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"https://www.uniprot.org/uniprotkb/A0A4X1VZ45", "locus": { "chromosome": "3", "start_pos": 47807832, "end_pos": 47824187, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000022153", "url": "https://www.ensembl.org/id/ENSSSCG00000022153" } ] } } ], "crossref": [ { "id": "A0A4X1VZ45", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1VZ45", "database": "AlphaFoldDB", "categories": [] }, { "id": "100623541", "url": "https://www.ncbi.nlm.nih.gov/gene/100623541", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000863", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000863", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100623541", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623541", "database": "KEGG Pathway", "categories": [ "Enzyme and 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"categories": [ "Protein" ] }, { "id": "A0A4X1VZ45-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZ45-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MALATAAGTRPPLREVAGVPLPATTVDNWSQIQGFEAQPDDLLICTYPKSGTTWIQEIVDMIEQGGDVERCQRVTIQHRHPFLEWARPPQPSGVDRAAAMPSPRVLRTHLPTQLLPPSFWENNCKFLYVARNAKDCMVSYFHFQRMNQTLPDPGTWEEYFETSVSGKVAWGSWFEHVKGWWEIRKKFQVLFLFYEDIKRNPKQEIQKVMQFMGKNLDGPVLDRIVQETSFEKMKANPMTNHSSAPKWILDQSISPFMRKGTVGDWKNHFTVAQKERFDEIYKQKMEGTSIHFCTEL", "length": 296, "header": "tr|A0A4X1VZ45-1|A0A4X1VZ45_PIG Isoform 1 of Sulfotransferase OS=Sus scrofa OX=9823 GN=SULT1C2 PE=3 SV=1 CANONICAL=A0A4X1VZ45-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VZ45-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZ45/entry", "sequence": { "sequence": "MALATAAGTRPPLREVAGVPLPATTVDNWSQIQGFEAQPDDLLICTYPKSGTTWIQEIVDMIEQGGDVERCQRVTIQHRHPFLEWARPPQPSGVDRAAAMPSPRVLRTHLPTQLLPPSFWENNCKFLYVARNAKDCMVSYFHFQRMNQTLPDPGTWEEYFETSVSGKVAWGSWFEHVKGWWEIRKKFQVLFLFYEDIKRNPKQEIQKVMQFMGKNLDGPVLDRIVQETSFEKMKANPMTNHSSAPKWILDQSISPFMRKGTVGDWKNHFTVAQKERFDEIYKQKMEGTSIHFCTEL", "length": 296, "header": "tr|A0A4X1VZ45-1|A0A4X1VZ45_PIG Isoform 1 of Sulfotransferase OS=Sus scrofa OX=9823 GN=SULT1C2 PE=3 SV=1 CANONICAL=A0A4X1VZ45-1" }, "locus": { "chromosome": "3", "start_pos": 47814482, "end_pos": 47809536, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022790.3", "url": "https://www.ensembl.org/id/ENSSSCT00000022790.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020612.2", "url": "https://www.ensembl.org/id/ENSSSCP00000020612.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VZ45", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZ45" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100623541", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623541", "resource": "KEGG Pathway" }, { "id": "R-SSC-156584", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-156584", "resource": "Reactome", "description": "Cytosolic sulfonation of small molecules" } ], "orthologs": [ { "uniprot_canonical_ac": "G3IHW6-1", "protein_name": "Sulfotransferase", "gene_name": "LOC100759668", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAQTPELRKQTKGKGIAEIAGIPLMADTVDNWSQIQTFKAKPDDLLICTYPKSGTTWIQEIVDMIEQNGDVEKCQRALIQHRHPFIEWARPPQPSGVDKANEMPAPRTLKTHLPTQLLPPSFWTSNCKFIYVARNAKDCMVSYYHFYRMSQLLPDPRTWDEYFEFFINGKVNWGSWFDHVRGWWEIRDRHQILFLFYEDMKRDPKHEIRKVMQFMGKNLDETVLDKIVQETSFEKMKENPMTNRSTVPKSILDQSISSFMRKGTVGDWKNHFTVAQNERFDEIYRQKMKGTSINFCMEL", "length": 299 }, "evidence": [ { "id": "A0A4X1VZ45", "url": "https://omabrowser.org/oma/group/A0A4X1VZ45/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "O00338-1", "protein_name": "Sulfotransferase 1C2", "gene_name": "SULT1C2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MALTSDLGKQIKLKEVEGTLLQPATVDNWSQIQSFEAKPDDLLICTYPKAGTTWIQEIVDMIEQNGDVEKCQRAIIQHRHPFIEWARPPQPSGVEKAKAMPSPRILKTHLSTQLLPPSFWENNCKFLYVARNAKDCMVSYYHFQRMNHMLPDPGTWEEYFETFINGKVVWGSWFDHVKGWWEMKDRHQILFLFYEDIKRDPKHEIRKVMQFMGKKVDETVLDKIVQETSFEKMKENPMTNRSTVSKSILDQSISSFMRKGTVGDWKNHFTVAQNERFDEIYRRKMEGTSINFCMEL", "length": 296 }, "evidence": [ { "id": "A0A4X1VZ45", "url": "https://omabrowser.org/oma/group/A0A4X1VZ45/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9D939-1", "protein_name": "Sulfotransferase 1C2", "gene_name": "Sult1c2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALTPELSRQTKLKEVAGIPLQAPTVDNWRQIQTFEAKPDDLLICTYPKSGTTWIQEIVDMIEQNGDVEKCRRTIIQHRHPFIEWARPPQPSGVDKANEMPAPRILRTHLPTQLLPPSFWTNNCKFLYVARNAKDCMVSYYHFYRMSQVLPEPGTWDEYFETFINGKVSWGSWFDHVKGWWEIRDKYQILFLFYEDMKRNPKHEIQKVMQFMGKNLDEDVVDKIVLETSFEKMKENPMTNRSTAPKSILDQSISPFMRKGTVGDWKNHFTVAQNERFDEIYKQKMGRTSLNFSMEL", "length": 296 }, "evidence": [ { "id": "A0A4X1VZ45", "url": "https://omabrowser.org/oma/group/A0A4X1VZ45/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9WUW8-1", "protein_name": "Sulfotransferase 1C2", "gene_name": "Sult1c2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALAPELSRQTKLKEVAGIPLQAPTVDNWSQIQTFKAKPDDLLICTYPKSGTTWIQEIVDMIEQNGDVEKCQRTIIQHRHPFIEWARPPQPSGVDKANAMPAPRILRTHLPTQLLPPSFWTNNCKFLYVARNAKDCMVSYYHFYRMSQVLPDPGTWNEYFETFINGKVSWGSWFDHVKGWWEIRDRYQILFLFYEDMKRDPKREIQKVMQFMGKNLDEEVVDKIVLETSFEKMKENPMTNRSTVPKSVLDQSISPFMRKGTVGDWKNHFTVAQNDRFDEIYKQKMGGTSLNFCMEL", "length": 296 }, "evidence": [ { "id": "A0A4X1VZ45", "url": "https://omabrowser.org/oma/group/A0A4X1VZ45/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "sulfation", "id": "GO:0051923", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051923", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VZ45", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZ45" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "aryl sulfotransferase activity", "id": "GO:0004062", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004062", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VZ45", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZ45" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VZ45", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZ45" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 147, "end_pos": 149, "annotation": "n_glycosylation_sequon" }, { "start_pos": 240, "end_pos": 242, "annotation": "n_glycosylation_sequon" }, { "start_pos": 28, "end_pos": 30, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "70607", "name": "", "equation": "4-ethylphenol + 3'-phosphoadenylyl sulfate = 4-ethylphenyl sulfate + adenosine 3',5'-bisphosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "70607", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/70607" } ] }, { "id": "R-SSC-176474", "name": "3,3'-diiodothyronine + PAPS => 3,3'-diiodothyronine 4-sulfate + PAP", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [ "R-ALL-176486" ], "output_participant_list": [ "R-ALL-176519" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-176474", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-176474" } ] }, { "id": "R-SSC-176585", "name": "3,5,3'-triiodothyronine + PAPS => 3,5,3'-triiodothyronine 4-sulfate + PAP", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [ "R-ALL-176667" ], "output_participant_list": [ "R-ALL-176564" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-176585", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-176585" } ] }, { "id": "R-SSC-176669", "name": "N-hydroxy-2-acetylaminofluorene + PAPS => 2-acetylaminofluorene-N-sulfate + PAP", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [ "R-ALL-176566" ], "output_participant_list": [ "R-ALL-176500" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-176669", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-176669" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-176486", "participant_name": "3,3'-diiodothyronine [cytosol]", "crossref": [ { "id": "35430", "database": "ChEBI", "url": "" }, { "id": "11533682", "database": "PubChem Substance", "url": "" }, { "id": "ZINC000016051523", "database": "ZINC", "url": "" }, { "id": "ZINC000045331653", "database": "ZINC", "url": "" }, { "id": "HMDB0005869", "database": "HMDB Metabolite", "url": "" } ] }, { "participant_id": "R-ALL-176500", "participant_name": "AAF-N-S [cytosol]", "crossref": [ { "id": "35424", "database": "ChEBI", "url": "" }, { "id": "ZINC000002018271", "database": "ZINC", "url": "" }, { "id": "11533684", "database": "PubChem Substance", "url": "" } ] }, { "participant_id": "R-ALL-176519", "participant_name": "3,3'-diiodothyronine 4-sulfate [cytosol]", "crossref": [ { "id": "11533681", "database": "PubChem Substance", "url": "" }, { "id": "35431", "database": "ChEBI", "url": "" }, { "id": "ZINC000031706818", "database": "ZINC", "url": "" } ] }, { "participant_id": "R-ALL-176564", "participant_name": "3,5,3'-triiodothyronine 4-sulfate [cytosol]", "crossref": [ { "id": "ZINC000085552312", "database": "ZINC", "url": "" }, { "id": "35432", "database": "ChEBI", "url": "" }, { "id": "HMDB0003036", "database": "HMDB Metabolite", "url": "" }, { "id": "11533680", "database": "PubChem Substance", "url": "" } ] }, { "participant_id": "R-ALL-176566", "participant_name": "N-hydroxy-2-acetylaminofluorene [cytosol]", "crossref": [ { "id": "17931", "database": "ChEBI", "url": "" }, { "id": "8145202", "database": "PubChem Substance", "url": "" }, { "id": "ZINC000005196784", "database": "ZINC", "url": "" } ] }, { "participant_id": "R-ALL-176667", "participant_name": "T3 [cytosol]", "crossref": [ { "id": "533015", "database": "ChEBI", "url": "" }, { "id": "ZINC000003830999", "database": "ZINC", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1VZ45", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZ45" }, { "id": "PF00685", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00685" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Sulfotransferase", "eco_id": "ECO_0000259", "start_pos": 39, "end_pos": 288, "start_aa": "Pro", "end_aa": "Thr", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], 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"categories": [ "Protein Classification" ] }, { "id": "PF00538", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00538", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013854502", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013854502", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VZ89", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZ89", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VZ89-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZ89-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1BKL8", "url": "https://www.uniprot.org/uniprotkb/A0A8D1BKL8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1BKL8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1BKL8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU06", "url": "https://www.uniprot.org/uniprotkb/F1SU06", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU06-1", "url": "https://www.uniprot.org/uniprotkb/F1SU06-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MATDTSQGDLVHPKALPLIVGAQLIHADKLGEKVEDNTMPIRRAVNSTRETPPKSKLADGEEQKPEPDVSSEESVSTVEEQENETPPATSSEAEQPKGEPENEEKEENKPSEETKKDEKDQSKEKEKKVKKTIPSWATLSASQLARAQKQTPMASSPRPKMDAILTEAIKACFQKSGASVVAIRKYIIHKYPSLELERRGYLLKQALKRELNRGVIKQVKGKGASGSFIVVQKSRKTPQKSRNRKNRSSAVNPEPQVKLEDILPLAFTRLCEPKEASYSLIRKYVSQYYPKLRVDIRPQLLKNALQRAVERGQLEQITGKGASGTFQLKKSGEKPLLGGSLMEYAILSAIAAMNEPKTCSTTALKKYVLENHPGTNSNYQMHLLKKTLQRCEKNGWMEQISGKGFSGTFQLCFPYYPSPGVLFPKKEPDDSKDEDEEEDDSSEEDSEDEEPPPKRRLQKKTPAKASGKAASMKQRGSKPAPRVPAAQRGKARPLPKKAPPKAKTPAKKARPSPSVIKKPSVGSSKKPAASVRKEVKLPGKGKSTTKKSFKAKK", "length": 553, "header": "tr|A0A4X1VZ89-1|A0A4X1VZ89_PIG Isoform 1 of Heterochromatin protein 1-binding protein 3 OS=Sus scrofa OX=9823 GN=HP1BP3 PE=1 SV=1 CANONICAL=A0A4X1VZ89-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VZ89-1", "url": 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GN=HP1BP3 PE=1 SV=1 CANONICAL=A0A4X1VZ89-1" }, "locus": { "chromosome": "6", "start_pos": 79001911, "end_pos": 78977053, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048275.3", "url": "https://www.ensembl.org/id/ENSSSCT00000048275.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054420.2", "url": "https://www.ensembl.org/id/ENSSSCP00000054420.2" } ] } }, { "isoform_ac": "F1SU06-1", "url": "https://www.uniprot.org/uniprotkb/F1SU06/entry", "sequence": { "sequence": "MATDTSQGDLVHPKALPLIVGAQLIHADKLGEKVEDNTMPIRRAVNSTRETPPKSKLADGEEQKPEPDVSSEESVSTVEEQENETPPATSSEAEQPKGEPENEEKEENKPSEETKKDEKDQSKEKEKKVKKTIPSWATLSASQLARAQKQTPMASSPRPKMDAILTEAIKACFQKSGASVVAIRKYIIHKYPSLELERRGYLLKQALKRELNRGVIKQVKGKGASGSFIVVQKSRKTPQKSRNRKNRSSAVNPEPQVKLEDILPLAFTRLCEPKEASYSLIRKYVSQYYPKLRVDIRPQLLKNALQRAVERGQLEQITGKGASGTFQLKKSGEKPLLGGSLMEYAILSAIAAMNEPKTCSTTALKKYVLENHPGTNSNYQMHLLKKTLQRCEKNGWMEQISGKGFSGTFQLCFPYYPSPGVLFPKKEPDDSKDEDEEEDDSSEEDSEDEEPPPKRRLQKKTPAKASGKARPLPKKAPPKAKTPAKKARPSPSVIKKPSVGSSKKPAASVRKEVKLPGKGKSTTKKSFKAKK", "length": 531, "header": "tr|F1SU06-1|F1SU06_PIG Computationally mapped isoform of Heterochromatin protein 1-binding protein 3 OS=Sus scrofa OX=9823 GN=HP1BP3 PE=1 SV=3 CANONICAL=A0A4X1VZ89-1" }, "locus": { "chromosome": "6", "start_pos": 79001911, "end_pos": 78977053, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058814.3", "url": "https://www.ensembl.org/id/ENSSSCT00000058814.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050966.2", "url": "https://www.ensembl.org/id/ENSSSCP00000050966.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D1BKL8", "url": "https://www.uniprot.org/uniprotkb/A0A8D1BKL8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100625284", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625284", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "F1N8H6-1", "protein_name": "Heterochromatin protein 1-binding protein 3", "gene_name": "HP1BP3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MATDLSEAEPVHHKALPLLTGTQLIHTDKLSEKAEDDTMPIRRSVNSSRETPPKSKPAEGGEEVKADAEATSEESASAGEEQENETLPAAAPSEAEQPKEPENEEKGETKSSVETKKDDKDQSKEKEKKVKKTIPAWATLSASQLARAQKQTQMAATSRPKMDAILTEAIKACFQKSGASVVAIRKYIIHKYPSLELERRGYLLKQALKRELERGIIRQVKGKGASGSFVVVSNAGKTVQKARDRKKSTSVSTPEQQVKLEDILPLAFTRLCEPKEASYSLIKKYVSQYYPKLKVDIRPQLLKNALQRAVEKGQLEQITGKGASGTFQLKKSGEKPLLGGTLMEDAILSAIAAMNEPKTCSTTALKKYILENHPGTNSNFQVHLLKRTLQRCEKNGWLEQISGKGFSGTFQLCFPYYPSPDVLYPEKQQDEDSEESEEEEEEESEEEEESEEEESEEEEPPPKKRMQKRPPPKSRSRAPPMKRRESKPKPRKTPAAHQGKAKPPPKVKTPVKKAKPAAPAIKKPSGGSSSKKPTASGRKEVKPSAKGKSAMRKSLRAKK", "length": 559 }, "evidence": [ { "id": "A0A4X1VZ89", "url": "https://omabrowser.org/oma/group/A0A4X1VZ89/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3I486-1", "protein_name": "Heterochromatin protein 1-binding protein 3", "gene_name": "Hp1bp3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MATDMSQGELVHPKPHPLIVGAQLIHMDKLGEKAEDSNMPIRRAVNSTRETPPKSKLAEGEEKKPEPDGSSEESISTVEEQENETPPATASEAEQPKGEPESEDKEENKTAEETKKDEKDQSKEKEKKVKKTIPSWATLSASQLARAQKQTPMASSPRPKMDAILTEAIKACFQKSGASVVAIRKYIIHKYPSLDLERRGYLLKQALKRELNRGVIKQVKGKGASGSFVVVQKSRKPPQKSRNRKKGSAVDPEPQVKLEDILPLAFTRLCEPKEASYSLIRKYVSQYYPKLRVDIRPQLLKNALQRAVERGQLEQITGKGASGTFQLKKSGEKPLLGGSLMEYAILSAIAAMNEPKTCSTTALKKYVLENHPGTNSNYQMHLLKKTLQKCEKNGWMEQISGKGFSGTFQLCFPYYPSPGVLFPKKEPDGSKDKDEDEDEDEDEDEDEEESSEDSEDEEPPPKRSLQKKTPAKSQMKATSMKQRGSKPVRKVPAAQRGKARPLPKKAPPKAKTPAKKARPSPSIIKKSSGSSSKKPTANARKEVKLSSKGKSTMKKSFKAKK", "length": 561 }, "evidence": [ { "id": "A0A4X1VZ89", "url": 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"database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3TEA8-1", "protein_name": "Heterochromatin protein 1-binding protein 3", "gene_name": "Hp1bp3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATDMSQGELIHPKALPLIVGAQLIHADKLGEKAEDTTMPIRRAVNSTRETPPKSKLAEGEEEKPEPDGSSEESISTVEEQENETPPATSSEAEQPKGEPESGEKEENNNKSAEEPKKDEKDQSKEKEKKVKKTIPAWATLSASQLARAQRQTPMASSPRPKMDAILTEAIKACFQKTGASVVAIRKYIIHKYPSLGLERRGYLLKQALKRELNRGVIRQVKGKGASGSFVVVQKSKPPQKSKNRKKGSALDPEPQVKLEDVLPLAFTRLCEPKEASYSLIRKYVSQYYPKLRVDIRPQLLKNALQRAVERGQLEQITGKGASGTFQLKKSGEKPLLGGSLMEYAILSAIAAMNEPKTCSTTALKKYVLENHPGANSNYQMHLLKKTLQKCEKNGWLEQISGKGFSGTFQLSFPYYPSPGVLFPKKESGGSDDEDEDDDDDESSEDSEDEEPPPKRSLQKKTPAKSQGKTASMKQRGSKPARKVPAAQRGKVRPLPKKAPPKAKTPARKARPSPSVIKKPSGSSSRKPIASARKEAKLPGKGKSAMKKSFKTKK", "length": 554 }, "evidence": [ { "id": "A0A4X1VZ89", "url": "https://omabrowser.org/oma/group/A0A4X1VZ89/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1VZE2-1", "uniprot_ac": "A0A4X1VZE2", "uniprot_id": "A0A4X1VZE2_PIG", "mass": { "chemical_mass": 22780.0, "monoisotopic_mass": 22780.0 }, "refseq": { "ac": "XP_020951579", "name": "proteasome subunit beta type-2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020951579" }, "gene_names": [ { "name": "PSMB2", "type": "recommended", "evidence": [ { "id": "A0A4X1VZE2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZE2" } ] }, { "name": "PSMB2", "type": "synonym", "evidence": [ { "id": "XP_020951579", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020951579" } ] } ], "protein_names": [ { "name": "Proteasome subunit beta", "type": "recommended", "evidence": [ { "id": "A0A4X1VZE2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZE2/entry#names_and_taxonomy" } ] }, { "name": "proteasome subunit beta type-2", "type": "synonym", "evidence": [ { "id": "XP_020951579", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020951579" } ] } ], "function": [ { "annotation": "Component of the proteasome, a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D1X8M1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1X8M1#function" }, { "database": "UniProtKB", "id": "RU004203", "url": "https://www.uniprot.org/uniprotkb/RU004203#function" }, { "database": "UniProtKB", "id": "A0A4X1VZE2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VZE2#function" } ] }, { "annotation": "Non-catalytic component of the 20S core proteasome complex involved in the proteolytic degradation of most intracellular proteins. This complex plays numerous essential roles within the cell by associating with different regulatory particles. Associated with two 19S regulatory particles, forms the 26S proteasome and thus participates in the ATP-dependent degradation of ubiquitinated proteins. The 26S proteasome plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins that could impair cellular functions, and by removing proteins whose functions are no longer required. Associated with the PA200 or PA28, the 20S proteasome mediates ubiquitin-independent protein degradation. 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[], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W038", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W038" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "USP39", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W038", "locus": { "chromosome": "3", "start_pos": 59121048, "end_pos": 59156442, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000030435", "url": "https://www.ensembl.org/id/ENSSSCG00000030435" } ] } } ], "crossref": [ { "id": "ENSSSCG00000030435", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000030435", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd02669", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd02669", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100621970", "url": "https://www.ncbi.nlm.nih.gov/gene/100621970", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001394", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001394", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001607", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001607", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR028889", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028889", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR033809", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033809", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038765", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038765", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050185", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050185", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100621970", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621970", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QLRRFKC", "url": "https://omabrowser.org/oma/group/QLRRFKC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1W038", "url": "https://www.orthodb.org/?gene=A0A4X1W038", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21646", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21646", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21646:SF16", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21646:SF16", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00443", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00443", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02148", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02148", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013843329", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013843329", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1W038", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W038", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W038-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W038-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QRY0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QRY0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QRY0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QRY0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QX14", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QX14", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QX14-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QX14-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QZ98", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZ98", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QZ98-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZ98-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FFR3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FFR3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FFR3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FFR3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FHE1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FHE1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FHE1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FHE1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFS1", "url": "https://www.uniprot.org/uniprotkb/I3LFS1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFS1-1", "url": "https://www.uniprot.org/uniprotkb/I3LFS1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSGRSKRESRGSTRGKRESESRSSSARVKRERDRERETEAPSSRSSPVRVKREVEPASAREAPAPVIPAVRVKRERDVDEDSEPEREVRAKNGRLDSEDQRSRHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLEKQVKFSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDNDETNQQGA", "length": 565, "header": "tr|A0A4X1W038-1|A0A4X1W038_PIG Isoform 1 of Ubiquitin carboxyl-terminal hydrolase 39 OS=Sus scrofa OX=9823 GN=USP39 PE=1 SV=1 CANONICAL=A0A4X1W038-1" }, "isoforms": [ { "isoform_ac": "A0A4X1W038-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W038/entry", "sequence": { "sequence": "MSGRSKRESRGSTRGKRESESRSSSARVKRERDRERETEAPSSRSSPVRVKREVEPASAREAPAPVIPAVRVKRERDVDEDSEPEREVRAKNGRLDSEDQRSRHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLEKQVKFSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDNDETNQQGA", "length": 565, "header": "tr|A0A4X1W038-1|A0A4X1W038_PIG Isoform 1 of Ubiquitin carboxyl-terminal hydrolase 39 OS=Sus scrofa OX=9823 GN=USP39 PE=1 SV=1 CANONICAL=A0A4X1W038-1" }, "locus": { "chromosome": "3", "start_pos": 59154252, "end_pos": 59125192, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078144.1", "url": "https://www.ensembl.org/id/ENSSSCT00000078144.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071597.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071597.1" } ] } }, { "isoform_ac": "A0A5G2QRY0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QRY0/entry", "sequence": { "sequence": "VICVEPSRLFSPKNGRLDSEDQRSRHCPYLDTINSLSSFPIGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLEKQVKFSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDNDETNQQGA", "length": 462, "header": "tr|A0A5G2QRY0-1|A0A4X1W038_PIG Computationally mapped isoform of Ubiquitin carboxyl-terminal hydrolase 39 OS=Sus scrofa OX=9823 GN=USP39 PE=1 SV=1 CANONICAL=A0A4X1W038-1" }, "locus": { "chromosome": "3", "start_pos": 59156442, "end_pos": 59125192, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083223.1", "url": "https://www.ensembl.org/id/ENSSSCT00000083223.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066859.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066859.1" } ] } }, { "isoform_ac": "A0A5G2QX14-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QX14/entry", "sequence": { "sequence": "MSGRSKRESRGSTRGKRESESRSSSARVKRERDRERETEAPSSRSSPVRVKREVEPASAREAPAPVIPAVRVKRERDVDEDSEPEREVRAKNGRLDSEDQRSRHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLEKQVKFSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITGQANGMNYKTSR", "length": 488, "header": "tr|A0A5G2QX14-1|A0A4X1W038_PIG Computationally mapped isoform of Ubiquitin carboxyl-terminal hydrolase 39 OS=Sus scrofa OX=9823 GN=USP39 PE=1 SV=1 CANONICAL=A0A4X1W038-1" }, "locus": { "chromosome": "3", "start_pos": 59154252, "end_pos": 59126196, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071739.1", "url": "https://www.ensembl.org/id/ENSSSCT00000071739.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066479.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066479.1" } ] } }, { "isoform_ac": "A0A5G2QZ98-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZ98/entry", "sequence": { "sequence": "VICVEPSRLFFPKNGRLDSEDQRSRHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLEKQVKFSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDNDETNQQGA", "length": 487, "header": "tr|A0A5G2QZ98-1|A0A4X1W038_PIG Computationally mapped isoform of Ubiquitin carboxyl-terminal hydrolase 39 OS=Sus scrofa OX=9823 GN=USP39 PE=1 SV=2 CANONICAL=A0A4X1W038-1" }, "locus": { "chromosome": "3", "start_pos": 59156442, "end_pos": 59125192, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070853.2", "url": "https://www.ensembl.org/id/ENSSSCT00000070853.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069463.2", "url": "https://www.ensembl.org/id/ENSSSCP00000069463.2" } ] } }, { "isoform_ac": "A0A8W4FFR3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FFR3/entry", "sequence": { "sequence": "PKSKNGRLDSEDQRSRHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLEKQVKFSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQVGWLQT", "length": 469, "header": "tr|A0A8W4FFR3-1|A0A4X1W038_PIG Computationally mapped isoform of Ubiquitin carboxyl-terminal hydrolase 39 OS=Sus scrofa OX=9823 GN=USP39 PE=1 SV=1 CANONICAL=A0A4X1W038-1" }, "locus": { "chromosome": "3", "start_pos": 59150691, "end_pos": 59126128, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000095894.1", "url": "https://www.ensembl.org/id/ENSSSCT00000095894.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077157.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077157.1" } ] } }, { "isoform_ac": "A0A8W4FHE1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FHE1/entry", "sequence": { "sequence": "VICVEPSRLFFPKNGRLDSEDQRSRHCPYLDTINSLSSFPIGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLEKQVKFSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDNDETNQQGA", "length": 462, "header": "tr|A0A8W4FHE1-1|A0A4X1W038_PIG Computationally mapped isoform of Ubiquitin carboxyl-terminal hydrolase 39 OS=Sus scrofa OX=9823 GN=USP39 PE=1 SV=1 CANONICAL=A0A4X1W038-1" }, "locus": { "chromosome": "3", "start_pos": 59156442, "end_pos": 59125192, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092687.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092687.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078852.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078852.1" } ] } }, { "isoform_ac": "I3LFS1-1", "url": "https://www.uniprot.org/uniprotkb/I3LFS1/entry", "sequence": { "sequence": "MSGRSKRESRGSTRGKRESESRSSSARVKRERDRERETEAPSSRSSPVRVKREVEPASAREAPAPVIPAVRVKRERDVDEDSEPEREVRAKNGRLDSEDQRSRHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLEKQVKFSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHIWKRRDNDETNQQGA", "length": 536, "header": "tr|I3LFS1-1|A0A4X1W038_PIG Computationally mapped isoform of Ubiquitin carboxyl-terminal hydrolase 39 OS=Sus scrofa OX=9823 GN=USP39 PE=1 SV=3 CANONICAL=A0A4X1W038-1" }, "locus": { "chromosome": "3", "start_pos": 59154252, "end_pos": 59125192, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027775.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027775.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022913.3", "url": "https://www.ensembl.org/id/ENSSSCP00000022913.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FFR3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FFR3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100621970", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621970", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "B2GV41-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 39", "gene_name": "Usp39", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSRSKRQSHGSTRGKRESESRGSSGRIKKERDREKEPEAASSRGSPVRVKREAEPTPREVPAPVLPVVRVKREREADEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNEEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDNDETNQQGA", "length": 564 }, "evidence": [ { "id": "A0A4X1W038", "url": "https://omabrowser.org/oma/group/A0A4X1W038/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3HPY5-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 39", "gene_name": "Usp39", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSSRSKRQSHGSTRGKRESESRGSSGRIKKERDREREPEAASSRGSPVRVKREAEPTAREVPAPAPPAVRVKREREADEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDNDETNQQGA", "length": 564 }, "evidence": [ { "id": "A0A4X1W038", "url": "https://omabrowser.org/oma/group/A0A4X1W038/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q3TIX9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 39", "gene_name": "Usp39", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSRSKRQSHGSTRGKRESESRGSSGRIKKERDREKEPEAASSRGSPVRVKREAEPAAREVPAPALPVVRVKREREADEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDNDETNQQGA", "length": 564 }, "evidence": [ { "id": "A0A4X1W038", "url": "https://omabrowser.org/oma/group/A0A4X1W038/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q53GS9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 39", "gene_name": "USP39", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSGRSKRESRGSTRGKRESESRGSSGRVKRERDREREPEAASSRGSPVRVKREFEPASAREAPASVVPFVRVKREREVDEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDNDETNQQGA", "length": 565 }, "evidence": [ { "id": "A0A4X1W038", "url": "https://omabrowser.org/oma/group/A0A4X1W038/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q54XH4-1", "protein_name": "SAP DNA-binding domain-containing protein", "gene_name": "usp39", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDINNLSKLKVPELKKELENRGFTKTAGLLKADLIEKLKSLLENENNSTTTTTTTTTTTTTTTTTNDKQPTQSIIINNEPQQEQIQQKQINKDEDDNANIPPPPPTKEELPPPPPNKAELPPPPPPPSINNNNNNIDINQKYNKMDIDIENKIIKEEVKEIFKSKEREDEEKDKEKKVLNILTENKNNEQIIIKPKEDIILTSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNGEEKKRKINDDENDDDDDDFDIATYKLKKKQIKTRKDCPYLDTVNRDVLDFDFEKVCSVSFHNHNVYACLVCGKYFQGKSQDSHANYHCLQMDHHVFINLKTQQIYCLPDDYEVIDSSLDDIKYLLNPTFTNDQIKELDRNSKLSRALDDSKYLPGIVGLNNIKNTAYVNVIIQSLARIPTIRNFLLNVDNIKTNKSPLVLTLSELLRKIWNPKNFKAQVSPHELLQAIQNSSQKRFNIRESSDPLDFLPWFLNTLHKDLGGTKQPNSSIIYKAFSGEIQITTDKPIPKSVDDDSSDYDNDDGENKKLKTKYSNSTSKQPFLFLTLDLPPKPIFKDDQDKSIIPQIPLFNLLSKYDGTTETILPNGEIKKYKILSLPNYLILCVKRFSKNNFFIEKEPTIVNFPIKNLDLNDYLPPGSPKSKFNLLATIKHEGDPNSGNFSVYINHKGNDKWFEMHDLSIKETMPQLIAVSECFFLIYEKIN", "length": 718 }, "evidence": [ { "id": "A0A4X1W038", "url": "https://omabrowser.org/oma/group/A0A4X1W038/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9VWP1-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 39", "gene_name": "Usp39", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MAQTQAPAAKRMKLEKTPANPVEEDETPSVFNPKYRVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHHVFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFTRQEISKLDQLQPKHSRTVDGVLYLPGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLQKQSYAHVVRPPGDSVFTLVQRFGELMRKMWNPRNFKSHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKHPNSSILYKIFLGEMKIYTRKMPPVELDDAAKAQLLATEEYKDQVEDKNFIYLTCDLPPPPLFTDEFRENIIPQVNLYQLLSKFNGTAEKEYKTYKANFMKRFEITRLPQFIILYIKRFTKNTFFLEKNPTIVNFPIKHVDFGDILGMRQRDKDVKDTKYNLVANIVHDGDPKKGTYRAHILHKANGQWYEMQDLHVTEILPQMITLTESYIQIYERCPNSS", "length": 494 }, "evidence": [ { "id": "A0A4X1W038", "url": "https://omabrowser.org/oma/group/A0A4X1W038/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W038", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W038" } ], "pmid": "" }, { "name": "spliceosomal complex", "id": "GO:0005681", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005681", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W038", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W038" } ], "pmid": "" }, { "name": "U4/U6 x U5 tri-snRNP complex", "id": "GO:0046540", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046540", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W038", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W038" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W038", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W038" } ], "pmid": "" }, { "name": "cysteine-type deubiquitinase activity", "id": "GO:0004843", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004843", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W038", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W038" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "protein deubiquitination", "id": "GO:0016579", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016579", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W038", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W038" } ], "pmid": "" }, { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W038", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W038" } ], "pmid": "" }, { "name": "spliceosomal complex assembly", "id": "GO:0000245", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000245", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W038", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W038" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 112, "end_pos": 114, "annotation": "n_glycosylation_sequon" }, { "start_pos": 494, "end_pos": 496, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1W038", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W038" }, { "id": "PS50271", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50271" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "UBP-type", "eco_id": "ECO_0000259", "start_pos": 103, "end_pos": 200, "start_aa": "Arg", "end_aa": "Gln", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A4X1W038", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W038" }, { "id": "PS50235", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50235" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "USP", "eco_id": "ECO_0000259", "start_pos": 225, "end_pos": 555, "start_aa": "Val", "end_aa": "Arg", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 112, "end_pos": 114 }, { "start_pos": 494, "end_pos": 496 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1W083-1", "uniprot_ac": "A0A4X1W083", "uniprot_id": "A0A4X1W083_PIG", "mass": { "chemical_mass": 21328.0, "monoisotopic_mass": 21328.0 }, "refseq": {}, "gene_names": [ { "name": "C2orf49", "type": "recommended", "evidence": [ { "id": "A0A4X1W083", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W083" } ] } ], "protein_names": [ { "name": "tRNA-splicing ligase complex subunit ASW", "type": "recommended", "evidence": [ { "id": "A0A4X1W083", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W083/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Accessory subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity and may function toward other RNAs.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W073", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W073#function" }, { "database": "UniProtKB", "id": "ARBA00094271", "url": "https://www.uniprot.org/uniprotkb/ARBA00094271#function" }, { "database": "UniProtKB", "id": "A0A4X1W083", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W083#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W083", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W083" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "C2orf49", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W083", "locus": { "chromosome": "3", "start_pos": 49454562, "end_pos": 49465447, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000035390", "url": "https://www.ensembl.org/id/ENSSSCG00000035390" } ] } } ], "crossref": [ { "id": "A0A4X1W083", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1W083", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000035390", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000035390", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR024887", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024887", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "SRWGKRM", "url": "https://omabrowser.org/oma/group/SRWGKRM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR28359", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28359", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR28359:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28359:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15323", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15323", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A4X1W073", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W073", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W073-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W073-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W083", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W083", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W083-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W083-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAGDVGGRSCTDSELLLHPELLSQEFLLLTLEQKNIAVENDLRINKDSLTDLYVQHAIPLPQRDLPKNRWGKMMEKKREQHEIRNETKRSSSVDGLRKRPLIVFDGSSTSTSIKVKKTENGDNDRLKPPPQNHDLLHRKSPPGPVKSPPLSPVAAAPVKLKRAAPKEEAEAANNLKPPEAKRKIQHVTWP", "length": 190, "header": "tr|A0A4X1W083-1|A0A4X1W083_PIG Isoform 1 of tRNA-splicing ligase complex subunit ASW OS=Sus scrofa OX=9823 GN=C2orf49 PE=3 SV=1 CANONICAL=A0A4X1W083-1" }, "isoforms": [ { "isoform_ac": "A0A4X1W073-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W073/entry", "sequence": { "sequence": "MAGDVGGRSCTDSELLLHPELLSQEFLLLTLEQKNIAVENDLRINKDSLTDLYVQHAIPLPQRDLPKNRWGKMMEKKREQHEIRNETKRSSSVDGLRKRPLIVFDGSSTSTSIKVKKTENGDNDRLKPPPQASVTSNAFRKLSNSSSGVSPLSLSSNLPTNNKMEPSTNDTNQNHDLLHRKSPPGPVKSPPLSPVAAAPVKLKRAAPKEEAEAANNLKPPEAKRKIQHVTWP", "length": 232, "header": "tr|A0A4X1W073-1|A0A4X1W083_PIG Computationally mapped isoform of tRNA-splicing ligase complex subunit ASW OS=Sus scrofa OX=9823 GN=C2orf49 PE=3 SV=1 CANONICAL=A0A4X1W083-1" }, "locus": { "chromosome": "3", "start_pos": 49465204, "end_pos": 49457300, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079494.2", "url": "https://www.ensembl.org/id/ENSSSCT00000079494.2" }, { "database": "Ensembl Peptide", "id": 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"MFHLITIEDKVRIAPSQFNNEVQTIEDEIEKKYTSKVVLNAGLFVALYDILGTGDSYVHSGDGGAHLMVRFRMVVFKPFKGEVLEGVIKKSSRQSIQISLGFFHEIYLNPIELPNPSNYNQEEGLWYWEWNENQLFFEDGGRVRFKIDQVEFNPEISQPAPSPKNVNTEAMDSYSLREYKEKQIENENLLKQVKSPLILKVSMREAGLGMVSWWTNQSAGDDDENEEDGGENQDDEVAEDDGGEEPTIEEDE", "length": 252 }, "evidence": [ { "id": "A0A4X1W1U5", "url": "https://omabrowser.org/oma/group/A0A4X1W1U5/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9D2C6-1", "protein_name": "DNA-directed RNA polymerase III subunit RPC8", "gene_name": "Polr3h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKFDEAEQVWVWEYETEEGAHDLYMDTGEEIRFRVVDESFVDTSPTGPSSAEAASSSEELPKKEAPYTLVGSISEPGLGLLSWWTSN", "length": 204 }, "evidence": [ { "id": "A0A4X1W1U5", "url": "https://omabrowser.org/oma/group/A0A4X1W1U5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9M9Y6-1", "protein_name": "DNA-directed RNA polymerase subunit", "gene_name": "NRPC7", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSIYDIKSVEGGFVLPGDGAATYKVGLRIVVFRPFVGEVIAAKFKESDANGLRLTLGFFDDIYVPAPLMPKPNRCEPDPYNRKQMIWVWEYGEPKEDYIVDDACQIKFRVESISYPSVPTERAEDAKPFAPMVVTGNMDDDGLGPVSWWDSYEQVDQEE", "length": 204 }, "evidence": [ { "id": "A0A4X1W1U5", "url": "https://omabrowser.org/oma/group/A0A4X1W1U5/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VTL6-1", "protein_name": "DNA-directed RNA polymerase III subunit RPC8", "gene_name": "Polr3H", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MFVLAELKDNVRIAPDQFHLKLVDAVRDEIDRKLANKVLLNVGLCIALKDIVSLKDSIILPGDGASHTEVLFRYVVFRPMVGTVITGKIRNCSREGVHVTLGFFDDILIPHAALQHPSRFDEAEQAWVWEYPLEDGAKHDLFMDVGEPIKFRVSREIFEETSPIGPPKTEAQTQQGASTSAAVASATSQEVKTPYRIIGAINESGLGVLSWWDQQGKDDEQDDEEDEEYDDEDGEGACEE", "length": 240 }, "evidence": [ { "id": "A0A4X1W1U5", "url": "https://omabrowser.org/oma/group/A0A4X1W1U5/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y535-1", "protein_name": "DNA-directed RNA polymerase III subunit RPC8", "gene_name": "POLR3H", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRCVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKFDEAEQVWVWEYETEEGAHDLYMDTGEEIRFRVVDESFVDTSPTGPSSADATTSSEELPKKEAPYTLVGSISEPGLGLLSWWTSN", "length": 204 }, "evidence": [ { "id": "A0A4X1W1U5", "url": "https://omabrowser.org/oma/group/A0A4X1W1U5/", "database": "OMA" } ], "glygen_name": "Human", 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"sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1W1Y8-1", "uniprot_ac": "A0A4X1W1Y8", "uniprot_id": "A0A4X1W1Y8_PIG", "mass": { "chemical_mass": 18280.0, "monoisotopic_mass": 18280.0 }, "refseq": { "ac": "NP_001231459", "name": "epithelial membrane protein 3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231459" }, "gene_names": [ { "name": "EMP3", "type": "recommended", "evidence": [ { "id": "A0A4X1W1Y8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W1Y8" } ] }, { "name": "EMP3", "type": "synonym", "evidence": [ { "id": "NP_001231459", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231459" } ] } ], "protein_names": [ { "name": "Epithelial membrane protein 3", "type": "recommended", "evidence": [ { "id": "A0A4X1W1Y8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W1Y8/entry#names_and_taxonomy" } ] }, { "name": "epithelial membrane protein 3", "type": "synonym", "evidence": [ { "id": "NP_001231459", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231459" } ] } ], "function": [ { "annotation": "Probably involved in cell proliferation and cell-cell interactions.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W1Y8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W1Y8#function" }, { "database": "UniProtKB", "id": "RU363088", "url": "https://www.uniprot.org/uniprotkb/RU363088#function" }, { "database": "UniProtKB", "id": "ARBA00058515", "url": "https://www.uniprot.org/uniprotkb/ARBA00058515#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W1Y8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W1Y8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "EMP3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W1Y8", "locus": { "chromosome": "6", "start_pos": 53761833, "end_pos": 53757776, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000023377", "url": "https://www.ensembl.org/id/ENSSSCG00000023377" } ] } } ], "crossref": [ { "id": "A0A4X1W1Y8", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1W1Y8", "database": "AlphaFoldDB", "categories": [] }, { "id": "100625126", "url": "https://www.ncbi.nlm.nih.gov/gene/100625126", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003934", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003934", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004031", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004031", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004032", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004032", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050579", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050579", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100625126", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625126", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CRFDNFT", "url": "https://omabrowser.org/oma/group/CRFDNFT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1W1Y8", "url": "https://www.orthodb.org/?gene=A0A4X1W1Y8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10671", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10671", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10671:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10671:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00822", "url": 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"id": "ENSSSCP00000054856.1", "url": "https://www.ensembl.org/id/ENSSSCP00000054856.1" } ] } }, { "isoform_ac": "F1SJF5-1", "url": "https://www.uniprot.org/uniprotkb/F1SJF5/entry", "sequence": { "sequence": "MAREDSVKCLRCLLYALNLLFWLMSISVLAVSAWMRDYLNNVLTLTAETRVEEAVILTYFPVVHPVMIAVCCFLIIVGMLGYCGTVKRNLLLLAWYFGSLLVIFCVELACGVWTYEQEIMVPVQWSDMVTLKARMTNYGLPRYRWLTHAWNFFQREFKCCGVVYFTDWLEMTEMDWPPDSCCVKEFPGCSKQAHQEDLSDLYQEGCGKKMYSFLRGTKQLQVLRFLGISIGVTQILAMILTITLLWALYYDRREPGTDQMMSLKNNNCEKDKFVLYSTVIFNLSSL", "length": 286, "header": "tr|F1SJF5-1|A0A4X1W2C4_PIG Computationally mapped isoform of Tetraspanin OS=Sus scrofa OX=9823 GN=TSPAN12 PE=3 SV=2 CANONICAL=A0A4X1W2C4-1" }, "locus": { "chromosome": "18", "start_pos": 26112353, "end_pos": 26048203, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018094.5", "url": "https://www.ensembl.org/id/ENSSSCT00000018094.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017604.3", "url": "https://www.ensembl.org/id/ENSSSCP00000017604.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SJF5", "url": "https://www.uniprot.org/uniprotkb/F1SJF5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100512202", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512202", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A061IMA4-1", "protein_name": "Tetraspanin", "gene_name": "Tspan12", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAREDSVKCLRCLLYALNLLFWLMSIGVLAVSAWMRDYLNNVLTLTAETRVEEAVILTYFPVVHPVMIAVCCFLIIVGMLGYCGTVKRNLLLLAWYFGTLLVIFCVELACGVWTYEQEVMVPVQWSDMVTLKARMTNYGLPRYRWLTHAWNFFQREFKCCGVVYFTDWLEMTEMDWPPDSCCVREFPGCSKQAHQEDLSDLYQEGCGKKMYSFLRGTKQLQVLRFLGISIGVTQILAMILTITLLWALYYDRREPGTDQMLSLKNDTSQHLSCHSVELLKPSLSRIFEHTSMANSFNTHFEMEEL", "length": 305 }, "evidence": [ { "id": "A0A4X1W2C4", "url": "https://omabrowser.org/oma/group/A0A4X1W2C4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "O95859-1", "protein_name": "Tetraspanin-12", "gene_name": "TSPAN12", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAREDSVKCLRCLLYALNLLFWLMSISVLAVSAWMRDYLNNVLTLTAETRVEEAVILTYFPVVHPVMIAVCCFLIIVGMLGYCGTVKRNLLLLAWYFGSLLVIFCVELACGVWTYEQELMVPVQWSDMVTLKARMTNYGLPRYRWLTHAWNFFQREFKCCGVVYFTDWLEMTEMDWPPDSCCVREFPGCSKQAHQEDLSDLYQEGCGKKMYSFLRGTKQLQVLRFLGISIGVTQILAMILTITLLWALYYDRREPGTDQMMSLKNDNSQHLSCPSVELLKPSLSRIFEHTSMANSFNTHFEMEEL", "length": 305 }, "evidence": [ { "id": "A0A4X1W2C4", "url": "https://omabrowser.org/oma/group/A0A4X1W2C4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q29RH7-1", "protein_name": "Tetraspanin-12", "gene_name": "TSPAN12", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAREDSVKCLRCLLYALNLLFWLMSISVLAVSAWMRDYLNNVLTLTAETRVEEAVILTYFPVVHPVMIAVCCFLIIVGMLGYCGTVKRNLLLLAWYFGSLLVIFCVELACGVWTYEQEIMVPVQWSDMVTLKARMTNYGLPRYRWLTHAWNFFQREFKCCGVVYFTDWLEMTEMDWPPDSCCVREFPGCSKQAHQEDLSDLYQEGCGKKMYSFLRGTKQLQVLRFLGISIGVTQILAMILTITLLWALYYDRREPGTDQMMALKNDTTQHLPCHSVELLKPSLSRIFEHTSMANSFNTHFEMEEL", "length": 305 }, "evidence": [ { "id": "A0A4X1W2C4", "url": "https://omabrowser.org/oma/group/A0A4X1W2C4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q569A2-1", "protein_name": "Tetraspanin-12", "gene_name": "Tspan12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAREDSVKCLRCLLYALNLLFWLMSISVLAVSAWMRDYLNNVLTLTAETRVEEAVILTYFPVVHPVMIAVCCFLIIVGMLGYCGTVKRNLLLLAWYFGTLLVIFCVELACGVWTYEQEVMVPVQWSDMVTLKARMTNYGLPRYRWLTHAWNYFQREFKCCGVVYFTDWLEMTEMDWPPDSCCVREFPGCSKQAHQEDLSDLYQEGCGKKMYSFLRGTKQLQVLRFLGISIGVTQILAMILTITLLWALYYDRREPGTDQMLSLKNDASQHLSCHSVELLKPSLSRIFEHTSMANSFNTHFEMEEL", "length": 305 }, "evidence": [ { "id": "A0A4X1W2C4", "url": "https://omabrowser.org/oma/group/A0A4X1W2C4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5ZIF5-1", "protein_name": "Tetraspanin-12", "gene_name": "TSPAN12", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAREDSVRCLRCLLYALNLLFWLMSISVLGVSAWIRDYLNNVLTLTAETRVEEAVILTYFPVVHPVMIAVCCFLILVGMLGYCGTVKRNLLLLVWYFGSLLVIFCVELACGVWTYEQEITVPVQWSDMITLKARMTNYGLPRYQWLTHAWNFFQREFKCCGVVYFTDWLEMTEMDWPPDSCCVREFPGCSKQAHHEDLSDLYQEGCGKKMYTFLRGTKQLQVLRFLGISIGVTQILAMILTITLLWALYYDRRDPGADQIMSLKNDTSQQLSCHSVELLKPSLTGIFEHTSMANSFNTHFEMEEL", "length": 305 }, "evidence": [ { "id": "A0A4X1W2C4", "url": "https://omabrowser.org/oma/group/A0A4X1W2C4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q8BKT6-1", "protein_name": "Tetraspanin-12", "gene_name": "Tspan12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAREDSVKCLRCLLYALNLLFWLMSISVLAVSAWMRDYLNNVLTLTAETRVEEAVILTYFPVVHPVMIAVCCFLIIVGMLGYCGTVKRNLLLLAWYFGTLLVIFCVELACGVWTYEQEVMVPVQWSDMVTLKARMTNYGLPRYRWLTHAWNYFQREFKCCGVVYFTDWLEMTEMDWPPDSCCVREFPGCSKQAHQEDLSDLYQEGCGKKMYSFLRGTKQLQVLRFLGISIGVTQILAMILTITLLWALYYDRREPGTDQMLSLKNDTSQHLSCHSVELLKPSLSRIFEHTSMANSFNTHFEMEEL", "length": 305 }, "evidence": [ { "id": "A0A4X1W2C4", "url": "https://omabrowser.org/oma/group/A0A4X1W2C4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "angiogenesis", "id": "GO:0001525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001525", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W2C4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2C4" } ], "pmid": "" }, { "name": "cell surface receptor signaling pathway", "id": "GO:0007166", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007166", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W2C4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2C4" } ], "pmid": "" }, { "name": "retina layer formation", "id": "GO:0010842", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010842", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W2C4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2C4" } ], "pmid": "" }, { "name": "regulation of angiogenesis", "id": "GO:0045765", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045765", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W2C4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2C4" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W2C4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2C4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 265, "end_pos": 267, "annotation": 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"total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1W2X3-1", "uniprot_ac": "A0A4X1W2X3", "uniprot_id": "A0A4X1W2X3_PIG", "mass": { "chemical_mass": 8925.0, "monoisotopic_mass": 8925.0 }, "refseq": { "ac": "NP_001177122", "name": "CDC42 small effector protein 1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001177122" }, "gene_names": [ { "name": "CDC42SE1", "type": "recommended", "evidence": [ { "id": "A0A4X1W2X3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2X3" } ] }, { "name": "CDC42SE1", "type": "synonym", "evidence": [ { "id": "NP_001177122", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001177122" } ] } ], "protein_names": [ { "name": "CDC42 small effector protein 1", "type": "recommended", "evidence": [ { "id": "A0A4X1W2X3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2X3/entry#names_and_taxonomy" } ] }, { "name": "CDC42 small effector protein 1", "type": "synonym", "evidence": [ { "id": "NP_001177122", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001177122" } ] } ], "function": [ { "annotation": "Probably involved in the organization of the actin cytoskeleton by acting downstream of CDC42, inducing actin filament assembly. Alters CDC42-induced cell shape changes. In activated T-cells, may play a role in CDC42-mediated F-actin accumulation at the immunological synapse. May play a role in early contractile events in phagocytosis in macrophages.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FIM1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FIM1#function" }, { "database": "UniProtKB", "id": "ARBA00025235", "url": "https://www.uniprot.org/uniprotkb/ARBA00025235#function" }, { "database": "UniProtKB", "id": "A0A4X1W2X3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2X3#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W2X3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2X3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CDC42SE1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2X3", "locus": { "chromosome": "4", "start_pos": 98180576, "end_pos": 98164024, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000031881", "url": "https://www.ensembl.org/id/ENSSSCG00000031881" } ] } } ], "crossref": [ { "id": "A0A4X1W2X3", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1W2X3", "database": "AlphaFoldDB", "categories": [] }, { "id": "100156313", "url": "https://www.ncbi.nlm.nih.gov/gene/100156313", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000095", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000095", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036936", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036936", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039056", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039056", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100156313", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156313", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] 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"database": "UniProtKB", "id": "A0A4X1W2Y0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2Y0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 31, "end_pos": 33, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "21672", "name": "", "equation": "[protein]-C-terminal S-[(2E,6E)-farnesyl]-L-cysteine + S-adenosyl-L-methionine = [protein]-C-terminal S-[(2E,6E)-farnesyl]-L-cysteine methyl ester + S-adenosyl-L-homocysteine", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "21672", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/21672" } ] }, { "id": "R-SSC-6788650", "name": "ICMT:Zn2+ transfers CH3 from AdoMet to isoprenylated proteins", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, endoplasmic reticulum membrane", "input_participant_list": [ "R-ALL-6788753" ], "output_participant_list": [ "R-ALL-6788758" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6788650", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6788650" } ] }, { "id": "R-SSC-9647977", "name": "ICMT methylates S-Farn RAS proteins", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "endoplasmic reticulum membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9647977", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9647977" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-6788753", "participant_name": "S-FARN-Cys [cytosol]", "crossref": [ { "id": "86019", "database": "ChEBI", "url": "" } ] }, { "participant_id": "R-ALL-6788758", "participant_name": "S-FARN-CME [cytosol]", "crossref": [ { "id": "ZINC000031259909", "database": "ZINC", "url": "" }, { "id": "87167", "database": "ChEBI", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], 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"field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": 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], "protein_names": [ { "name": "2-(3-amino-3-carboxypropyl)histidine synthase subunit 2", "type": "recommended", "evidence": [ { "id": "A0A4X1W2Z0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2Z0/entry#names_and_taxonomy" } ] }, { "name": "2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020952492", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020952492" } ] } ], "function": [ { "annotation": "Required for the first step of diphthamide biosynthesis, a post-translational modification of histidine which occurs in elongation factor 2. DPH1 and DPH2 transfer a 3-amino-3-carboxypropyl (ACP) group from S-adenosyl-L-methionine (SAM) to a histidine residue, the reaction is assisted by a reduction system comprising DPH3 and a NADH-dependent reductase. 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"database": "Ensembl Gene", "id": "ENSSSCG00000036620", "url": "https://www.ensembl.org/id/ENSSSCG00000036620" } ] } } ], "crossref": [ { "id": "100736914", "url": "https://www.ncbi.nlm.nih.gov/gene/100736914", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR010014", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010014", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016435", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016435", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042263", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042263", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042265", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042265", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "QIWNENH", "url": "https://omabrowser.org/oma/group/QIWNENH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1W2Z0", "url": "https://www.orthodb.org/?gene=A0A4X1W2Z0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10762", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10762", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10762:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10762:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01866", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01866", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-5358493", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5358493", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020952492", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020952492", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1W2Z0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2Z0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W2Z0-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2Z0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W846", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W846", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W846-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W846-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MESTFSSPAEAALQREAGAAGRRTPLGDLDRVYELDRVVGFVSDLGCHRVALQFPDQLLGDAGAVAARLEEVTGSKMFILGDTAYGSCCVDVLGAEQAGAQALVHFGPACLSPPARPLPVAFVLGQRSVALELCAKAFEAQNPDPAAPVVLLSEPACAHALEALATLLRPRYLDLLVSSPALPLPGGSRSPDPEPLERFGRRFPLAPGRRLEEYGAFYVGGSEAISDPDLDPDLSRLLLGWAPGRPFSSCCPDTGRTQDEGARAGRLRARRRYLVERARDARVVGLLAGTLGVARHREALAHLRSLTQAAGKRSYVLALGRPTPAKLANFPEVDVFVLLACPLSALAPQSSGNFFRPVLAPCELEAACNPAWPPPGLAPHLTHYADLLPGSPFHVPLPPPDSELWDTPDVSLITGGLRPPPAWTPSTDSGCSALTLRPQQELVESSPAASFLSSRSWQGLQPRLGQTPVTGAVSGRRGIAIAYEDEGSS", "length": 489, "header": "tr|A0A4X1W2Z0-1|A0A4X1W2Z0_PIG Isoform 1 of 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 OS=Sus scrofa OX=9823 GN=DPH2 PE=3 SV=1 CANONICAL=A0A4X1W2Z0-1" }, "isoforms": [ { "isoform_ac": "A0A4X1W2Z0-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2Z0/entry", "sequence": { "sequence": "MESTFSSPAEAALQREAGAAGRRTPLGDLDRVYELDRVVGFVSDLGCHRVALQFPDQLLGDAGAVAARLEEVTGSKMFILGDTAYGSCCVDVLGAEQAGAQALVHFGPACLSPPARPLPVAFVLGQRSVALELCAKAFEAQNPDPAAPVVLLSEPACAHALEALATLLRPRYLDLLVSSPALPLPGGSRSPDPEPLERFGRRFPLAPGRRLEEYGAFYVGGSEAISDPDLDPDLSRLLLGWAPGRPFSSCCPDTGRTQDEGARAGRLRARRRYLVERARDARVVGLLAGTLGVARHREALAHLRSLTQAAGKRSYVLALGRPTPAKLANFPEVDVFVLLACPLSALAPQSSGNFFRPVLAPCELEAACNPAWPPPGLAPHLTHYADLLPGSPFHVPLPPPDSELWDTPDVSLITGGLRPPPAWTPSTDSGCSALTLRPQQELVESSPAASFLSSRSWQGLQPRLGQTPVTGAVSGRRGIAIAYEDEGSS", "length": 489, "header": "tr|A0A4X1W2Z0-1|A0A4X1W2Z0_PIG Isoform 1 of 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 OS=Sus scrofa OX=9823 GN=DPH2 PE=3 SV=1 CANONICAL=A0A4X1W2Z0-1" }, "locus": { "chromosome": "6", "start_pos": 167325428, "end_pos": 167323135, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075539.2", "url": "https://www.ensembl.org/id/ENSSSCT00000075539.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064691.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064691.1" } ] } }, { "isoform_ac": "A0A4X1W846-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W846/entry", "sequence": { "sequence": "MESTFSSPAEAALQREAGAAGRRTPLGDLDRVYELDRVVGFVSDLGCHRVALQFPDQLLGDAGAVAARLEEVTGSKMFILGDTAYGSCCVDVLGAEQAGAQALVHFGPACLSPPARPLPVAFVLGQRSVALELCAKAFEAQNPDPAAPVVLLSEPACAHALGSPFHVPLPPPDSELWDTPDVSLITGGLRPPPAWTPSTDSGCSALTLRPQQELVESSPAASFLSSRSWQGLQPRLGQTPVTGAVSGRRGIAIAYEDEGSS", "length": 261, "header": "tr|A0A4X1W846-1|A0A4X1W2Z0_PIG Computationally mapped isoform of 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 OS=Sus scrofa OX=9823 GN=DPH2 PE=3 SV=1 CANONICAL=A0A4X1W2Z0-1" }, "locus": { "chromosome": "6", "start_pos": 167325428, "end_pos": 167323135, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040437.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040437.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000048720.2", "url": "https://www.ensembl.org/id/ENSSSCP00000048720.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 424, "start_aa": "Thr", "end_pos": 424, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr424", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W846", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W846" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-5358493", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5358493", "resource": "Reactome", "description": "Synthesis of diphthamide-EEF2" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A140T8A2-1", "protein_name": "2-(3-amino-3-carboxypropyl)histidine synthase subunit 2", "gene_name": "DPH2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MESTFSSPAEAALQREAGSAGLRTSLGDLDRVYELERVVGFVRDLGCQRVALQFPDQLLGDAGAVAALLEEATGSKMFILGDTAYGSCCVDVLGAEQAGAQALVHFGPACLSPPARPLPVAFVLGQRSVALELCAKAFEAQNPDPTAPVVLLSEPSCAHALEALATLLRPRYLDLLVSSPALPLPAGSFNPNPEPLERFGRRFPLAPGRCLEEYGAFYVGGSEAISDPDLDPDLSRLLLGWAPGRPFSSCCPDTGRTQDEGVRAGRLRARRRYLIERARDARVVGLLAGTLGVARHREALAHLRNLTQAAGKRSYVLALGRPTPAKLANFPEVDVFVLLACPLGTLAPQPSGSFFRPVLAPCELEAACNPAWPPPGLAPHLTHYTDLLPGSPFHVPLPPPDSELWDAPDVSLITGDLRPPPAWKPSDDPGCSALTPKPQLELAESSPAASFLSSRSWKGLQPSLGQTPVTGAVSGRRGIAIAYEDEGNS", "length": 489 }, "evidence": [ { "id": "A0A4X1W2Z0", "url": "https://omabrowser.org/oma/group/A0A4X1W2Z0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A4QN59-1", "protein_name": "2-(3-amino-3-carboxypropyl)histidine synthase subunit 2", "gene_name": "dph2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTDAFSSSSEAVLQRSVTSTHSFHPSGDLLLLYQTPETCRFITSNHFKKVALQFPDELLPDAVRVSAEIEDKTKAKTYILGDTSYGSCCVDEVAAEHVGADCIVHYGSSCLSPCRRLPLLYVFGKRPIDVHQCASSFKELYPNLQSHIIVLFDVTYSHAIDDLRTLLCDVYPNVVVSRLKTDHSCGAELIQDSCVDLQSNDDGVIFKFGRQFRIKEGQTVNDYSIFYIGQEGLTLTNFMMSWNNCVFSSFNPETSTGRVESVQINKALMKRYYAIERAKDASVVGILVGTLGVANYLIIIEQLKDTIQRAGKKSYMFAMGKINVPKLANFLEIDIYVLVACPENSLLDSSEFYRPVVTPFEMELACNKHREWTGEYVTDFRELLPGGSSHVGFPEPSQSATEEETTDVSLITGALRSCSTNSSEMMHNSETSSLVLRNQTLTVANTNAAASFLAGRSWQGLEPKLGQTPVVKAVKGQRGIAIAYEEEGNEDASTQQKL", "length": 498 }, "evidence": [ { "id": "A0A4X1W2Z0", "url": "https://omabrowser.org/oma/group/A0A4X1W2Z0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "B0G132-1", "protein_name": "2-(3-amino-3-carboxypropyl)histidine synthase subunit 2", "gene_name": "dph2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSAAPPPSIYTESFSTSSNNTTESESINVEETRENILSGFSFEEYFQVSESISVIIKNNFKKIALQLPDYLLWASSELSNKIQNSVPLEYGIKVFILGDTSYGSCCVDEVTSSHLKSDFIIHYGHSCLSPSSKIPVQYVFGKKKNFNVDKFSIELNKLVESKKEENFVIFYDLLYHHNRDSIENLYKNNDNIIVTNINNFNNIYLNNSFKNNKLNETQNCNNNYNNDCCGSDNNNNNNDSGCCGGNNNNNNNNSGCCQSQSQQQQQQNDCCQQKLNNEINNENDNNNEELISGRKIEFKNEKDIKKFNFIWIGEESLTLTNLLMNFNQQMVYRYYIDDNKLLQETLPRNKSLMRRYHISEKCKDASIIGIVVSTLSVQKYSETIDGLKKLIIASGKKPYVFVVGRLNVPKLANFSEIDIYVIVACHENTMVDSKDFYKPIATPFELNLSLRNEKWTGEYITDFGRVFPKLIKDLSFDEDDENKCEIPEDQVEDDQGNIHHFSLVTGRIVIQNKNQSTLQQQQQQQQTQQSGDLISVNNQFKQVSLVGEHLSNKTYKGLDMRIGETPVTTAIEGMSGIPKNYNTDKNNL", "length": 588 }, "evidence": [ { "id": "A0A4X1W2Z0", "url": "https://omabrowser.org/oma/group/A0A4X1W2Z0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P32461-1", "protein_name": "2-(3-amino-3-carboxypropyl)histidine synthase subunit 2", "gene_name": "DPH2", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MEVAPALSTTQSDVAFQKVETHEIDRSSYLGPCYNSDELMQLISAYYNVEPLVGYLEQHPEYQNVTLQFPDDLIKDSSLIVRLLQSKFPHGKIKFWVLADTAYSACCVDEVAAEHVHAEVVVHFGDACLNAIQNLPVVYSFGTPFLDLALVVENFQRAFPDLSSKICLMANAPFSKHLSQLYNILKGDLHYTNIIYSQVNTSAVEEKFVTILDTFHVPEDVDQVGVFEKNSVLFGQHDKADNISPEDYHLFHLTTPQDPRLLYLSTVFQSVHIFDPALPGMVTGPFPSLMRRYKYMHVARTAGCIGILVNTLSLRNTRETINELVKLIKTREKKHYLFVVGKPNVAKLANFEDIDIWCILGCSQSGIIVDQFNEFYKPIITPYELNLALSEEVTWTGKWVVDFRDAIDEIEQNLGGQDTISASTTSDEPEFDVVRGRYTSTSRPLRALTHLELEAADDDDSKQLTTRHTASGAVIKGTVSTSASALQNRSWKGLGSDFDSTEVDNTGADIEEGISGVARGYGFDREDAMKKENK", "length": 534 }, "evidence": [ { "id": "A0A4X1W2Z0", "url": "https://omabrowser.org/oma/group/A0A4X1W2Z0/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q002B5-1", "protein_name": "2-(3-amino-3-carboxypropyl)histidine synthase subunit 2", "gene_name": "DPH2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MESTFSSPAEAALQREAGVPGLFTPPEDLDRVYELERVTKFVCDLGCQRVALQFPDQLLGDAGAVAVRLEEVTGSKMFILGDTAYGSCCVDVLGAEQAGAEALVHFGPACLSPPASLLPITFVLGQRSVALELCAKAFEARNPDPTAPVVLLSEPACAHALEALATLLRPKYQDLLISSPALPLPVGSPSSQPEPLERFGRRFPLSPGRCLEEYGAFYVGGSQASSDPVLDPDLSRLLLGWTPGRPFISCCPDTGQTQDQGVQAGRLRARRLYLIERARDAHVVGLLAGTLGVAQHREALAHLRKLTEAAGKRSYVLALGRPTPAKLANFPEMDIFVLLACPLGALAPQPSGGFFRPILTPCELEAACNPAWPPPGLAPHLTHYAELLPGSPFYVPLPPPESELWDTPDVSLISGDLRPPPSWKSSSDTGCSALTPRPQLELAESSPAASFLSSRSWQGLEPRLGQTPVKEAVQGRRGIAIAYEDEGSG", "length": 489 }, "evidence": [ { "id": "A0A4X1W2Z0", "url": "https://omabrowser.org/oma/group/A0A4X1W2Z0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q568Y2-1", "protein_name": "2-(3-amino-3-carboxypropyl)histidine synthase subunit 2", "gene_name": "Dph2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MESTFSSPAEAALQREAGVPGQFTPPEDLDRVYELERVTRFICDLGCQRVALQFPDQLLGDAGAVAARLEEVTGSKMFILGDTAYGSCCVDVLGAEQAGAQALVHFGPACLSPPASLLPITFVLGRRPVALELCAKAFEAQNPDPTALVVLLSEPACAHALEPLATLLRPKYQDLLISSPALPLPVGSLSSQPESLERFGRRFPLNPGRSLEEYGAFYVGASQASSDPNLDPDLSRLLLGWTPGRPFFSCCPDTGQTQDQGAKAGRLRARRLYLVERARDARVVGLLVGTLGVAQHLEALAHLRKLTEAAGKRSYVLALGKPTPAKLANFPEMDVFVLLACPLGALTLQPSGGFFRPILTPCELEAACNPAWPPPGLAPHLTHYAELLPGSPFHVPLPPPESELWDTPDVSLISGELRPPPPWKSSDDTKCSALTPRPQLELAESSPAASFLSSRSWQGLEPRLGQTPVKEAVQGRRGIAIAYEDEGSS", "length": 489 }, "evidence": [ { "id": "A0A4X1W2Z0", "url": "https://omabrowser.org/oma/group/A0A4X1W2Z0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9BQC3-1", "protein_name": "2-(3-amino-3-carboxypropyl)histidine synthase subunit 2", "gene_name": "DPH2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MESMFSSPAEAALQRETGVPGLLTPLPDLDGVYELERVAGFVRDLGCERVALQFPDQLLGDAVAVAARLEETTGSKMFILGDTAYGSCCVDVLGAEQAGAQALIHFGPACLSPPARPLPVAFVLRQRSVALELCVKAFEAQNPDPKAPVVLLSEPACAHALEALATLLRPRYLDLLVSSPAFPQPVGSLSPEPMPLERFGRRFPLAPGRRLEEYGAFYVGGSKASPDPDLDPDLSRLLLGWAPGQPFSSCCPDTGKTQDEGARAGRLRARRRYLVERARDARVVGLLAGTLGVAQHREALAHLRNLTQAAGKRSYVLALGRPTPAKLANFPEVDVFVLLACPLGALAPQLSGSFFQPILAPCELEAACNPAWPPPGLAPHLTHYADLLPGSPFHVALPPPESELWETPDVSLITGDLRPPPAWKSSNDHGSLALTPRPQLELAESSPAASFLSSRSWQGLEPRLGQTPVTEAVSGRRGIAIAYEDEGSG", "length": 489 }, "evidence": [ { "id": "A0A4X1W2Z0", "url": "https://omabrowser.org/oma/group/A0A4X1W2Z0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9CR25-1", "protein_name": "2-(3-amino-3-carboxypropyl)histidine synthase subunit 2", "gene_name": "Dph2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESTFSSPAEAALQREAGVPGQFTPPEDLDRVYELERVTKFVCDLGCQRVTLQFPDQLLGDAGAVAARLEEVTGAKMFILGDTAYGSCCVDVLGAEQAGAQALVHFGPACLSPPASQLPITFVLGQRPVALELCAKAFEAQNPDPTAPVVLLSEPACAHALEPLAMLLLPKYQDLLISRPALPLPVGSPSSQPESLERFGRCFPLNPGRRLEEYGAFYVGASQASSDSSLDPDLSRLLLGWTPGRPFFSCCPDTGQTQDQGAKAGRLRARRLYLIERARDARVVGLLAGTLGVARHREALAHLRKLTEAAGKRSYVLAVGKPTPAKLANFPEMDVFVLLACPLGALAPQPSGGFFRPVLTPCELEAACNPAWPPPGLAPHLTHYAELLPGSPFHVPLPPPESELWDTPDVSLISGELRPPPPWKSSDDTRCSALIPRPQLELAESSPAASFLSSRNWQGLEPRLGQTPVKEAVRGRRGIAIAYEDEGSS", "length": 489 }, "evidence": [ { "id": "A0A4X1W2Z0", "url": "https://omabrowser.org/oma/group/A0A4X1W2Z0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9M1A5-1", "protein_name": "2-(3-amino-3-carboxypropyl)histidine synthase subunit 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MELEFESKYEINRTAEFIISKSFTRIALQFPDELLKDSTKVVSALKSKTRLLTDREVRFFVMADTTYGSCCIDEVGALHIDSECVVHYGQTCLSPTSVLPAFFVFGKASINVSSCVKHLIDYASKSDKPIMILYGLEYAHVIPQIREELGLSKTDSQLSVANVLCSFISPSKDPRESMEHPRPYSESDSSDSLSSSRSYRLGGLTWDLPEGSKIEDYLLFWIGSDSSAFANVVLTFNGCDIVRYDAEEDSLVTEFYQQRRILKRRYYLVEKAKDANIIGILVGTLGVAGYLHMIHHMQALISAAGKKSYILAMGRPNPAKLANFPECDVFIYISCAQTALLDSKEFMSPVITPFEANLAFSRGSEWTGAYLMHFQDVINSVKSESEAHIGSEEPRFSFFQGGYVEDHKTNDQAKNGEEDTGETMTLVQAAEKALQLRGNDHNSLTKQTAAKSGPEYFLNRVYRGLEINSENTLPEPYIVGRSGKASGYKHE", "length": 491 }, "evidence": [ { "id": "A0A4X1W2Z0", "url": "https://omabrowser.org/oma/group/A0A4X1W2Z0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VFE9-1", "protein_name": "2-(3-amino-3-carboxypropyl)histidine synthase subunit 2", "gene_name": "Dph2", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MTSSETSASAFSSSDTAALERQAEVEQPVTLEQIWNENHRRSSVDWIRKSGYKRVCLQFPDDYLPHSNAISVGLKELLAPEDVKVFILADTTYGSCCVDEIAAAHVDADSVIHFGNACRSRAARLPVLYLYPELPLDVNVLLSKLQGLRAESIDRQVCVYLDIGYQHVYGEKLKKQLSEILEPKELLLELFPPIEAESTTTRETTNLERICIFIGADNQRFANLSLTAPAAVQWHIYDGSSDSLSSKNPLTAQFIRRRYFHIEKCKDAQTLGLIVATLSAEGYLDVVTRLQTMAKGRGIKTQLISVGRINPAKLANFLEIDCFVLIGCPFNNMYDSKEYYKPIVSVFEAEMALNPAWHMRYPEAYVTDFKQLLPEGRSFLPFDAADIPENDVSLVSGRLRGAVNDSLETGGDPASLALATQAKMALMTTDTGLSFEDRTWQGLDPALGQTEPAKLQQGLSGIPINYSHQ", "length": 469 }, "evidence": [ { "id": "A0A4X1W2Z0", "url": "https://omabrowser.org/oma/group/A0A4X1W2Z0/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W2Z0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2Z0" } ], "pmid": "" }, { "name": "perinuclear region of cytoplasm", "id": "GO:0048471", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048471", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W2Z0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2Z0" } ], "pmid": "" }, { "name": "2-(3-amino-3-carboxypropyl)histidine synthase complex", "id": "GO:0120513", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0120513", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W2Z0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2Z0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W2Z0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2Z0" } ], "pmid": "" }, { "name": "iron-sulfur cluster binding", "id": "GO:0051536", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051536", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W2Z0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2Z0" } ], "pmid": "" }, { "name": "2-(3-amino-3-carboxypropyl)histidine synthase activity", "id": "GO:0090560", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090560", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W2Z0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2Z0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "protein histidyl modification to diphthamide", "id": "GO:0017183", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017183", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W2Z0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2Z0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 424 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1W934-1", "uniprot_ac": "A0A4X1W934", "uniprot_id": "A0A4X1W934_PIG", "mass": { "chemical_mass": 31390.0, "monoisotopic_mass": 31390.0 }, "refseq": { "ac": "XP_005660169", "name": "interleukin-33 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005660169" }, "gene_names": [ { "name": "IL33", "type": "recommended", "evidence": [ { "id": "A0A4X1W934", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W934" } ] }, { "name": "IL-33", "type": "synonym", "evidence": [ { "id": "XP_005660169", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005660169" } ] }, { "name": "IL33", "type": "synonym", "evidence": [ { "id": "XP_005660169", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005660169" } ] } ], "protein_names": [ { "name": "Interleukin-33", "type": "recommended", "evidence": [ { "id": "A0A4X1W934", "database": "UniProtKB", "url": 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"K7GLW1-1", "url": "https://www.uniprot.org/uniprotkb/K7GLW1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGKVETDQQQLTQQQLNGN", "length": 365, "header": "tr|A0A4X1WA16-1|A0A4X1WA16_PIG Isoform 1 of PHD finger protein 6 OS=Sus scrofa OX=9823 GN=PHF6 PE=1 SV=1 CANONICAL=A0A4X1WA16-1" }, "isoforms": [ { "isoform_ac": "A0A4X1W4E9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4E9/entry", "sequence": { "sequence": "MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGKVETDQQQLTQQQLNGN", "length": 331, "header": "tr|A0A4X1W4E9-1|A0A4X1WA16_PIG Computationally mapped isoform of PHD finger protein 6 OS=Sus scrofa OX=9823 GN=PHF6 PE=1 SV=1 CANONICAL=A0A4X1WA16-1" }, "locus": { "chromosome": "X", "start_pos": 110299518, "end_pos": 110253226, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029950.4", "url": "https://www.ensembl.org/id/ENSSSCT00000029950.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019329.3", "url": "https://www.ensembl.org/id/ENSSSCP00000019329.3" } ] } }, { "isoform_ac": "A0A4X1WA16-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WA16/entry", "sequence": { "sequence": "MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGKVETDQQQLTQQQLNGN", "length": 365, "header": "tr|A0A4X1WA16-1|A0A4X1WA16_PIG Isoform 1 of PHD finger protein 6 OS=Sus scrofa OX=9823 GN=PHF6 PE=1 SV=1 CANONICAL=A0A4X1WA16-1" }, "locus": { "chromosome": "X", "start_pos": 110299518, "end_pos": 110253226, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058181.1", "url": "https://www.ensembl.org/id/ENSSSCT00000058181.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041594.1", "url": "https://www.ensembl.org/id/ENSSSCP00000041594.1" } ] } }, { "isoform_ac": "A0A4X1WAA1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WAA1/entry", "sequence": { "sequence": "MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGKVETDQQQLTQQQLNGN", "length": 330, "header": "tr|A0A4X1WAA1-1|A0A4X1WA16_PIG Computationally mapped isoform of PHD finger protein 6 OS=Sus scrofa OX=9823 GN=PHF6 PE=1 SV=1 CANONICAL=A0A4X1WA16-1" }, "locus": { "chromosome": "X", "start_pos": 110299518, "end_pos": 110253226, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050146.1", "url": "https://www.ensembl.org/id/ENSSSCT00000050146.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033019.1", "url": "https://www.ensembl.org/id/ENSSSCP00000033019.1" } ] } }, { "isoform_ac": "K7GLW1-1", "url": "https://www.uniprot.org/uniprotkb/K7GLW1/entry", "sequence": { "sequence": "MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEAADLEESFNEHELEPSSPKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYK", "length": 324, "header": "tr|K7GLW1-1|A0A4X1WA16_PIG Computationally mapped isoform of PHD finger protein 6 OS=Sus scrofa OX=9823 GN=PHF6 PE=1 SV=3 CANONICAL=A0A4X1WA16-1" }, "locus": { "chromosome": "X", "start_pos": 110289418, "end_pos": 110253226, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000035499.4", "url": "https://www.ensembl.org/id/ENSSSCT00000035499.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000028848.3", "url": "https://www.ensembl.org/id/ENSSSCP00000028848.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W4E9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4E9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-9940951", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9940951", "resource": "Reactome", "description": "Interaction of NuRD complexes with transcription factors" } ], "orthologs": [ { "uniprot_canonical_ac": "D3ZQV8-1", "protein_name": "PHD finger protein 6", "gene_name": "Phf6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKTKKKSRKGRPRKTNLKGLAEDTRSTSSHGTDETESSSYRDRSPHRSSPNDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGRVAIDQQLTQQQLNGN", "length": 364 }, "evidence": [ { "id": "A0A4X1WA16", "url": "https://omabrowser.org/oma/group/A0A4X1WA16/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q08DR0-1", "protein_name": "PHD finger protein 6", "gene_name": "PHF6", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENQARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGKVEIDQQQLTQQQLNGN", "length": 365 }, "evidence": [ { "id": "A0A4X1WA16", "url": "https://omabrowser.org/oma/group/A0A4X1WA16/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8IWS0-1", "protein_name": "PHD finger protein 6", "gene_name": "PHF6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGKVEIDQQQLTQQQLNGN", "length": 365 }, "evidence": [ { "id": "A0A4X1WA16", "url": "https://omabrowser.org/oma/group/A0A4X1WA16/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9D4J7-1", "protein_name": "PHD finger protein 6", "gene_name": "Phf6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKTKKKSRKGRPRKTNLKGLPEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGRVAIDQQLTQQQLNGN", "length": 364 }, "evidence": [ { "id": "A0A4X1WA16", "url": "https://omabrowser.org/oma/group/A0A4X1WA16/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "negative regulation of transcription by RNA polymerase II", "id": "GO:0000122", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000122", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WA16", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WA16" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": 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"name": "ribonucleoprotein complex binding", "id": "GO:0043021", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043021", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WA16", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WA16" } ], "pmid": "" }, { "name": "histone deacetylase binding", "id": "GO:0042826", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042826", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WA16", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WA16" } ], "pmid": "" }, { "name": "phosphoprotein binding", "id": "GO:0051219", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051219", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WA16", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WA16" } ], "pmid": "" }, { "name": "histone binding", "id": "GO:0042393", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042393", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WA16", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WA16" } ], "pmid": "" }, { "name": 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"" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WA16", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WA16" } ], "pmid": "" }, { "name": "kinetochore", "id": "GO:0000776", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000776", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WA16", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WA16" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 316, "end_pos": 318, "annotation": "n_glycosylation_sequon" }, { "start_pos": 328, "end_pos": 330, "annotation": "n_glycosylation_sequon" }, { "start_pos": 59, "end_pos": 61, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1WA16", "database": 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regulatory subunit gamma", "gene_name": "Pik3r3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNTVWSMDRDDADWREVMMPYSTELIFYIEMDPPALPPKPPKPVTSAVTNGMKDCFVSLQDAEWYWGDISREEVNDKLRDMPDGTFLVRDASTKMQGDYTLTLRKGGNNKLIKIYHRDGNYGFSEPLTFNSVVELINHYHHESLAQYNPKLDVKLMYPVSRYQQDQLVKEDNIDAVGKNLQEFHSQYQEKSKEYDRLYEEYTRTSQEIQMKRTAIEAFNETIKIFEEQCHTQEQHSKDYIERFRREGNEKEIERIMMNYDKLKSRLGEIHDSKVRLEQDLKKQALDNREIDKKMNSIKPDLIQLRKIRDQHLVWLNHRGVRQRRLNAWLGIKSEDTDESYFINEDDESLPHYDEKTWFVEDVNRVQAEDLLYGKPDGAFLIRESSKKGCYACSVVADGEVKPCVIYSPARGYGFAEPYNLYGSLKELVLHYQQTSLVQHNDSLNVTLAYPVHAQMPSLCR", "length": 461 }, "evidence": [ { "id": "A0A4X1W4S4", "url": "https://omabrowser.org/oma/group/A0A4X1W4S4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q64143-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit gamma", "gene_name": "Pik3r3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MYNTVWSMDRDDADWREVMMPYSTELIFYIEMDPPALPPKPPKPMTPAVTNGMKDSFISLQDAEWYWGDISREEVNDKLRDMPDGTFLVRDASTKMQGDYTLTLRKGGNNKLIKIYHRDGKYGFSEPLTFTSVVELINHYHHESLAQYNPKLDVKLTYPVSRFQQDQLVKEDNIDAVGKNLQEFHSQYQEKSKEYDRLYEEYTRTSQEIQMKRTAIEAFNETIKIFEEQCHTQEQHSKDYIERFRREGNEKEIERIMMNYDKLKSRLGEIHDSKLRLEQDLKKQALDNREIDKKMNSIKPDLIQLRKIRDQHLVWLNHRGVRQRRLNAWLGIKNEDSDESYFINEEDENLPHYDEKTWFVEDINRVQAEDLLYGKPDGAFLIRESSKKGCYACSVVADGEVKHCVIYSTARGYGFAEPYNLYSSLKELVLHYQQTSLVQHNDSLNVRLAYPVHAQMPTLCR", "length": 461 }, "evidence": [ { "id": "A0A4X1W4S4", "url": "https://omabrowser.org/oma/group/A0A4X1W4S4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7KTZ2-1", "protein_name": "Pi3K21B, isoform B", "gene_name": "Pi3K21B", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MRPQAPGSLVDPNEDELRMAPWYWGRISREEAKSILHGKPDGSFLVRDALSMKGEYTLTLMKDGCEKLIKICHMDRKYGFIETDLFNSVVEMINYYKENSLSMYNKTLDITLSNPIVRAREDEESQPHGDLCLLSNEFIRTCQLLQNLEQNLENKRNSFNAIREELQEKKLHQSVFGNTEKIFRNQIKLNESFMKAPADAPSTEAGGAGDGANAAASAAANANARRSLQEHKQTLLNLLDALQAKGQVLNHYMENKKKEELLLERQINALKPELQILQLRKDKYIERLKGFNLKDDDLKMILQMGFDKWQQLYETVSNQPHSNEALWLLKDAKRRNAEEMLKGAPSGTFLIRARDAGHYALSIACKNIVQHCLIYETSTGFGFAAPYNIYATLKSLVEHYANNSLEEHNDTLTTTLRWPVLYWKNNPLQVQMIQLQEEMDLEYEQAATLRPPPMMGSSAPIPTSRSREHDVVDGTGSLEAEAAPASISPSNFSTSQ", "length": 496 }, "evidence": [ { "id": "A0A4X1W4S4", "url": "https://omabrowser.org/oma/group/A0A4X1W4S4/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q92569-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit gamma", "gene_name": "PIK3R3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MYNTVWSMDRDDADWREVMMPYSTELIFYIEMDPPALPPKPPKPMTSAVPNGMKDSSVSLQDAEWYWGDISREEVNDKLRDMPDGTFLVRDASTKMQGDYTLTLRKGGNNKLIKIYHRDGKYGFSDPLTFNSVVELINHYHHESLAQYNPKLDVKLMYPVSRYQQDQLVKEDNIDAVGKKLQEYHSQYQEKSKEYDRLYEEYTRTSQEIQMKRTAIEAFNETIKIFEEQCHTQEQHSKEYIERFRREGNEKEIERIMMNYDKLKSRLGEIHDSKMRLEQDLKNQALDNREIDKKMNSIKPDLIQLRKIRDQHLVWLNHKGVRQKRLNVWLGIKNEDADENYFINEEDENLPHYDEKTWFVEDINRVQAEDLLYGKPDGAFLIRESSKKGCYACSVVADGEVKHCVIYSTARGYGFAEPYNLYSSLKELVLHYQQTSLVQHNDSLNVRLAYPVHAQMPSLCR", "length": 461 }, "evidence": [ { "id": "A0A4X1W4S4", "url": "https://omabrowser.org/oma/group/A0A4X1W4S4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "phosphotyrosine residue binding", "id": "GO:0001784", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001784", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W4S4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4S4" } ], "pmid": "" }, { "name": "1-phosphatidylinositol-3-kinase regulator activity", "id": "GO:0046935", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046935", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W4S4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4S4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "positive regulation of gene expression", "id": "GO:0010628", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010628", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W4S4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4S4" } ], "pmid": "" }, { "name": "insulin receptor signaling pathway", "id": "GO:0008286", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008286", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W4S4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4S4" } ], "pmid": "" }, { "name": "phosphatidylinositol 3-kinase/protein kinase B signal transduction", "id": "GO:0043491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043491", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W4S4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4S4" } ], "pmid": "" }, { "name": "cell migration involved in sprouting angiogenesis", "id": "GO:0002042", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002042", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W4S4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4S4" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "phosphatidylinositol 3-kinase complex, class IA", "id": "GO:0005943", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005943", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W4S4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4S4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 220, "end_pos": 222, "annotation": "n_glycosylation_sequon" }, { "start_pos": 441, "end_pos": 443, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1W4S4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4S4" }, { "id": "PS50001", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50001" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SH2", "eco_id": "ECO_0000259", "start_pos": 65, "end_pos": 160, "start_aa": "Trp", "end_aa": "Val", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 220, "end_pos": 222 }, { "start_pos": 441, "end_pos": 443 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1W4T3-1", "uniprot_ac": "A0A4X1W4T3", "uniprot_id": "A0A4X1W4T3_PIG", "mass": { "chemical_mass": 29944.0, "monoisotopic_mass": 29944.0 }, "refseq": { "ac": "XP_001927254", "name": "single-strand selective monofunctional uracil DNA glycosylase isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001927254" }, "gene_names": [ { "name": "SMUG1", "type": "recommended", "evidence": [ { "id": "A0A4X1W4T3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4T3" } ] }, { "name": "SMUG1", "type": "synonym", "evidence": [ { "id": "XP_001927254", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001927254" } ] } ], "protein_names": [ { "name": "Single-strand-selective monofunctional uracil-DNA glycosylase 1", "type": "synonym", "evidence": [ { "id": "A0A4X1W4T3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4T3/entry#names_and_taxonomy" } ] }, { "name": "single-strand selective monofunctional uracil DNA glycosylase isoform X2", "type": "synonym", "evidence": [ { "id": "XP_001927254", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001927254" } ] } ], "function": [ { "annotation": "Recognizes base lesions in the genome and initiates base excision DNA repair. Acts as a monofunctional DNA glycosylase specific for uracil (U) residues in DNA with a preference for single-stranded DNA substrates. The activity is greater toward mismatches (U/G) compared to matches (U/A). Excises uracil (U), 5-formyluracil (fU) and uracil derivatives bearing an oxidized group at C5 [5-hydroxyuracil (hoU) and 5-hydroxymethyluracil (hmU)] in ssDNA and dsDNA, but not analogous cytosine derivatives (5-hydroxycytosine and 5-formylcytosine), nor other oxidized bases. The activity is damage-specific and salt-dependent. The substrate preference is the following: ssDNA > dsDNA (G pair) = dsDNA (A pair) at low salt concentration, and dsDNA (G pair) > dsDNA (A pair) > ssDNA at high salt concentration.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W4T3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4T3#function" }, { "database": "UniProtKB", "id": "ARBA00060140", "url": "https://www.uniprot.org/uniprotkb/ARBA00060140#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W4T3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4T3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SMUG1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4T3", "locus": { "chromosome": "5", "start_pos": 19398252, "end_pos": 19412648, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024221", "url": "https://www.ensembl.org/id/ENSSSCG00000024221" } ] } } ], "crossref": [ { "id": "A0A4X1W4T3", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1W4T3", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000024221", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024221", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd19374", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd19374", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100153912", "url": "https://www.ncbi.nlm.nih.gov/gene/100153912", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR005122", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005122", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036895", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036895", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039134", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039134", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100153912", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100153912", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VANYCPL", "url": "https://omabrowser.org/oma/group/VANYCPL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1W4T3", "url": "https://www.orthodb.org/?gene=A0A4X1W4T3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13235", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13235", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13235:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13235:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03167", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03167", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-110329", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-110329", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-110357", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-110357", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_001927254", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001927254", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1W4T3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4T3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W4T3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4T3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFZ8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFZ8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFZ8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFZ8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FKG9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FKG9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FKG9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FKG9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAVPQAFPLGPLHEPAGALMEPQPSPRSLAEGFLEEELRLNGELKQLQFSEPVGLIYNPVEYAWEPHRSYVTRYCQGPKQVLFLGMNPGPFGMAQTGVPFGEVSMVRDWLGIGGSVLTPPQEHPKRPVLGLECPQSEVSGARFWGFFRNLCGQPEVFFRHCFVHNLCPLLLLAPSGRNLTPAELPAKQREQLLGVCDAALCRQVQLLGVRLVVGVGRVAEQRARRALAGLMPEVQVEGLLHPSPRSPQANKGWEAVAKERLNELGLLPLLTK", "length": 272, "header": "tr|A0A4X1W4T3-1|A0A4X1W4T3_PIG Isoform 1 of Single-strand-selective monofunctional uracil-DNA glycosylase 1 OS=Sus scrofa OX=9823 GN=SMUG1 PE=1 SV=1 CANONICAL=A0A4X1W4T3-1" }, "isoforms": [ { "isoform_ac": "A0A4X1W4T3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4T3/entry", "sequence": { "sequence": "MAVPQAFPLGPLHEPAGALMEPQPSPRSLAEGFLEEELRLNGELKQLQFSEPVGLIYNPVEYAWEPHRSYVTRYCQGPKQVLFLGMNPGPFGMAQTGVPFGEVSMVRDWLGIGGSVLTPPQEHPKRPVLGLECPQSEVSGARFWGFFRNLCGQPEVFFRHCFVHNLCPLLLLAPSGRNLTPAELPAKQREQLLGVCDAALCRQVQLLGVRLVVGVGRVAEQRARRALAGLMPEVQVEGLLHPSPRSPQANKGWEAVAKERLNELGLLPLLTK", "length": 272, "header": "tr|A0A4X1W4T3-1|A0A4X1W4T3_PIG Isoform 1 of Single-strand-selective monofunctional uracil-DNA glycosylase 1 OS=Sus scrofa OX=9823 GN=SMUG1 PE=1 SV=1 CANONICAL=A0A4X1W4T3-1" }, "locus": { "chromosome": "5", "start_pos": 19402155, "end_pos": 19400312, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032497.4", "url": "https://www.ensembl.org/id/ENSSSCT00000032497.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024249.1", "url": "https://www.ensembl.org/id/ENSSSCP00000024249.1" } ] } }, { "isoform_ac": "A0A5G2QFZ8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFZ8/entry", "sequence": { "sequence": "MAVPQAFPLGPLHEPAGALMEPQPSPRSLAEGFLEEELRLNGELKQLQFSEPVGLIYNPVEYAWEPHRSYVTRYCQGPKQVLFLGMNPGPFGMAQTGVPFGEVSMVRDWLGIGGSVLTPPQEHPKRPVLGLECPQSEANKGWEAVAKERLNELGLLPLLTK", "length": 161, "header": "tr|A0A5G2QFZ8-1|A0A4X1W4T3_PIG Computationally mapped isoform of Single-strand-selective monofunctional uracil-DNA glycosylase 1 OS=Sus scrofa OX=9823 GN=SMUG1 PE=1 SV=1 CANONICAL=A0A4X1W4T3-1" }, "locus": { "chromosome": "5", "start_pos": 19402155, "end_pos": 19400312, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083725.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083725.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063168.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063168.1" } ] } }, { "isoform_ac": "A0A8W4FKG9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FKG9/entry", "sequence": { "sequence": "MAVPQAFPLGPLHEPAGALMEPQPSPRSLAEGFLEEELRLNGELKQLQFSEPVGLIYNPVEYAWEPHRSYVTRYCQGPKQVLFLGMNPGPFGMAQTGVPFGEVSMVRDWLGIGGSVLTPPQEHPKRPVLGLECPQSEVKFSVAAREGPEDLDLHPALRLVNPVTVDELTDLSKPQEPL", "length": 178, "header": "tr|A0A8W4FKG9-1|A0A4X1W4T3_PIG Computationally mapped isoform of Single-strand-selective monofunctional uracil-DNA glycosylase 1 OS=Sus scrofa OX=9823 GN=SMUG1 PE=1 SV=1 CANONICAL=A0A4X1W4T3-1" }, "locus": { "chromosome": "5", "start_pos": 19402155, "end_pos": 19399725, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000106853.1", "url": "https://www.ensembl.org/id/ENSSSCT00000106853.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079966.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079966.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFZ8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFZ8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100153912", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100153912", "resource": "KEGG Pathway" }, { "id": "R-SSC-110329", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-110329", "resource": "Reactome", "description": "Cleavage of the damaged pyrimidine" }, { "id": "R-SSC-110357", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-110357", "resource": "Reactome", "description": "Displacement of DNA glycosylase by APEX1" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7F7L8-1", "protein_name": "Single-strand selective monofunctional uracil DNA glycosylase isoform X1", "gene_name": "Smug1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MELQAIQGDSGMAVSQAFLPGPTHEPTGPLMEPLPCTRSLAEGFLEEELRLNAELRQLQFPEPVGVIYNPVDYAWEPHSNYVTRYCQGPKEVLFLGMNPGPFGMAQTGVPFGEVNVVRDWLGVGGSVRTPPQEHPKRPVLGLECTQSEVSGARFWGLFRALCGQPHVFFRHCFVHNLCPLLFLAPSGRNLTPAELPAKQREQLLMICDAALCRQVQLLGVRLVVGVGRLAEQRARRALAGLSPEVQVEGLLHPSPRSPQANKGWEAAARERLQELGLLPLLTSECPARSSTP", "length": 292 }, "evidence": [ { "id": "A0A4X1W4T3", "url": "https://omabrowser.org/oma/group/A0A4X1W4T3/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q53HV7-1", "protein_name": "Single-strand selective monofunctional uracil DNA glycosylase", "gene_name": "SMUG1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPQAFLLGSIHEPAGALMEPQPCPGSLAESFLEEELRLNAELSQLQFSEPVGIIYNPVEYAWEPHRNYVTRYCQGPKEVLFLGMNPGPFGMAQTGVPFGEVSMVRDWLGIVGPVLTPPQEHPKRPVLGLECPQSEVSGARFWGFFRNLCGQPEVFFHHCFVHNLCPLLFLAPSGRNLTPAELPAKQREQLLGICDAALCRQVQLLGVRLVVGVGRLAEQRARRALAGLMPEVQVEGLLHPSPRNPQANKGWEAVAKERLNELGLLPLLLK", "length": 270 }, "evidence": [ { "id": "A0A4X1W4T3", "url": "https://omabrowser.org/oma/group/A0A4X1W4T3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q59I47-1", "protein_name": "Single-strand selective monofunctional uracil DNA glycosylase", "gene_name": "SMUG1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAVPQPFPSGPHLQPAGALMEPQPSPRSLAEGFLQEELRLNDELRQLQFSELVGIVYNPVEYAWEPHRSYVTRYCQGPKQVLFLGMNPGPFGMAQTGVPFGEVSVVRDWLGLGGPVRTPPQEHPKRPVLGLECPQSEVSGARFWGFFRNLCGQPEVFFRHCFVHNLCPLLLLAPSGRNITPAELPAKQREQLLGVCDAALCRQVQLLGVRLVVGVGRVAEQRARRALASLMPEVQVEGLLHPSPRSPQANKGWEAVAKERLNELGLLPLLTS", "length": 272 }, "evidence": [ { "id": "A0A4X1W4T3", "url": "https://omabrowser.org/oma/group/A0A4X1W4T3/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q6P5C5-1", "protein_name": "Single-strand selective monofunctional uracil DNA glycosylase", "gene_name": "Smug1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAASQTFPLGPTHEPASALMEPLPCTRSLAEGFLEEELRLNAELSQLQFPEPVGVIYNPVDYAWEPHRNYVTRYCQGPKEVLFLGMNPGPFGMAQTGVPFGEVNVVRDWLGVGGPVLTPPQEHPKRPVLGLECPQSEVSGARFWGFFRTLCGQPQVFFRHCFVHNLCPLLFLAPSGRNLTPAELPAKQREQLLSICDAALCRQVQLLGVRLVVGVGRLAEQRARRALAGLTPEVQVEGLLHPSPRSAQANKGWEAAARERLQELGLLPLLTDEGSARPT", "length": 279 }, "evidence": [ { "id": 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"MLKRKLNQQKCNLEIGEPTKTSARQGSTSEFFDKPLWLKFYETEVKLNEALEKLNPPESTPFIYNPIVYASQLHCDYLRRYMDGPKKLVFVGMNPGPNGMAQTGIPFGNVRTVKLLMQLAGSVDQPPVVHPKRPVAGLDCRIEEPSGVRLWELFLRLAGSMQTFSQQCFVHNFCPLAFFGADGRNITPSEIRGAYKNQLGDLCLHTLEEQLKLLQPDVIVAVGEYVHSALKRSGYAKSNCVSVLRLPHPSPRSTNNTNWPEKAQAFLEEHNLIRFMRNEA", "length": 280 }, "evidence": [ { "id": "A0A4X1W4T3", "url": "https://omabrowser.org/oma/group/A0A4X1W4T3/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W4T3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W4T3" } ], "pmid": "" }, { "name": "uracil DNA N-glycosylase activity", "id": "GO:0004844", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004844", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W4T3", "url": 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"MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKVDKEDRQVTTEEAQAWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQLEHCMLGHTVDLNSGSKAGSSCC", "length": 201, "header": "tr|A0A4X1W519-1|A0A4X1W519_PIG Isoform 1 of small monomeric GTPase OS=Sus scrofa OX=9823 GN=RAB9B PE=1 SV=1 CANONICAL=A0A4X1W519-1" }, "isoforms": [ { "isoform_ac": "A0A4X1W519-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W519/entry", "sequence": { "sequence": "MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKVDKEDRQVTTEEAQAWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQLEHCMLGHTVDLNSGSKAGSSCC", "length": 201, "header": "tr|A0A4X1W519-1|A0A4X1W519_PIG Isoform 1 of small monomeric GTPase OS=Sus scrofa OX=9823 GN=RAB9B PE=1 SV=1 CANONICAL=A0A4X1W519-1" }, "locus": { "chromosome": "X", "start_pos": 84724757, "end_pos": 84724155, "strand": "+", "evidence": [ { "database": "Ensembl 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"name": "G protein activity", "id": "GO:0003925", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003925", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W519", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W519" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W519", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W519" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W519", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W519" } ], "pmid": "" }, { "name": "lysosome", "id": "GO:0005764", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005764", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W519", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W519" } ], "pmid": "" 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The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
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The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
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The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. 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"title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1W5W7-1", "uniprot_ac": "A0A4X1W5W7", "uniprot_id": "A0A4X1W5W7_PIG", "mass": { "chemical_mass": 46515.0, "monoisotopic_mass": 46515.0 }, "refseq": {}, "gene_names": [ { "name": "MFSD5", "type": "recommended", "evidence": [ { "id": "A0A4X1W5W7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5W7" } ] } ], "protein_names": [ { "name": "Solute carrier family 61 member 1", "type": "recommended", "evidence": [ { "id": "A0A4X1W5W7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5W7/entry#names_and_taxonomy" } ] }, { "name": "Major facilitator superfamily domain-containing protein 5", "type": "synonym", "evidence": [ { "id": "A0A4X1W5W7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5W7/entry#names_and_taxonomy" } ] }, { "name": "Molybdate transporter 2 homolog", "type": "synonym", "evidence": [ { "id": "A0A4X1W5W7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5W7/entry#names_and_taxonomy" } ] }, { "name": "Molybdate-anion transporter", "type": "synonym", "evidence": [ { "id": "A0A4X1W5W7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5W7/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Mediates high-affinity intracellular uptake of the rare oligo-element molybdenum.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W5W7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5W7#function" }, { "database": "UniProtKB", "id": "ARBA00003019", "url": "https://www.uniprot.org/uniprotkb/ARBA00003019#function" }, { "database": "UniProtKB", "id": "F1SFS4", "url": "https://www.uniprot.org/uniprotkb/F1SFS4#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W5W7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5W7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MFSD5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5W7", "locus": { "chromosome": "5", "start_pos": 18478737, "end_pos": 18476366, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000264", "url": "https://www.ensembl.org/id/ENSSSCG00000000264" } ] } } ], "crossref": [ { "id": "A0A4X1W5W7", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1W5W7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000000264", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000264", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd17487", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd17487", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100157167", "url": "https://www.ncbi.nlm.nih.gov/gene/100157167", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR008509", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008509", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036259", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036259", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100157167", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157167", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CCGWVVL", "url": "https://omabrowser.org/oma/group/CCGWVVL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SFS4", "url": "https://www.orthodb.org/?gene=F1SFS4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23516", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23516", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23516:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23516:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05631", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05631", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A4X1W5W7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5W7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W5W7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5W7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SFS4", "url": "https://www.uniprot.org/uniprotkb/F1SFS4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SFS4-1", "url": "https://www.uniprot.org/uniprotkb/F1SFS4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLVTAYLAFVVLLASCLGLELSRCRAKPSGRACSNPSFLRFQLDFYQVYFLALAADWLQAPYLYKLYQHYHFLEGQIAILYVCGLASTVLFGLVASSLVDWLGRKKSCVLFSLTYSLCCLTKLSQDYFVLLVGRALGGLSTALLFSAFEAWYIHEHVERHDFPAEWIPATFARAAFWNHVLAVMAGVAAEAVACWMGLGPVAPFVAAIPLLALAGALALHSWGENYDRQRAFSRTCAGGLRCLLSDRRVLLLGTIQALFESVIFIFVFLWTPVLDPHGAPLGIIFSSFMAASLLGSSLYRIATSKSPGQESPVESFIAFLLIELACGLYFPSMSFLRRKVIPDTEQTGVLNWFRVPLHLLACLGLLVLHDSDRKTGTRNMFSICSAVMVMALLAVVGLFTVVRHDAELRVPSPTGEPYAPEL", "length": 422, "header": "tr|A0A4X1W5W7-1|A0A4X1W5W7_PIG Isoform 1 of Solute carrier family 61 member 1 OS=Sus scrofa OX=9823 GN=MFSD5 PE=3 SV=1 CANONICAL=A0A4X1W5W7-1" }, "isoforms": [ { "isoform_ac": "A0A4X1W5W7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5W7/entry", "sequence": { "sequence": "MLVTAYLAFVVLLASCLGLELSRCRAKPSGRACSNPSFLRFQLDFYQVYFLALAADWLQAPYLYKLYQHYHFLEGQIAILYVCGLASTVLFGLVASSLVDWLGRKKSCVLFSLTYSLCCLTKLSQDYFVLLVGRALGGLSTALLFSAFEAWYIHEHVERHDFPAEWIPATFARAAFWNHVLAVMAGVAAEAVACWMGLGPVAPFVAAIPLLALAGALALHSWGENYDRQRAFSRTCAGGLRCLLSDRRVLLLGTIQALFESVIFIFVFLWTPVLDPHGAPLGIIFSSFMAASLLGSSLYRIATSKSPGQESPVESFIAFLLIELACGLYFPSMSFLRRKVIPDTEQTGVLNWFRVPLHLLACLGLLVLHDSDRKTGTRNMFSICSAVMVMALLAVVGLFTVVRHDAELRVPSPTGEPYAPEL", "length": 422, "header": "tr|A0A4X1W5W7-1|A0A4X1W5W7_PIG Isoform 1 of Solute carrier family 61 member 1 OS=Sus scrofa OX=9823 GN=MFSD5 PE=3 SV=1 CANONICAL=A0A4X1W5W7-1" }, "locus": { "chromosome": "5", "start_pos": 18478498, "end_pos": 18477149, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070522.2", "url": "https://www.ensembl.org/id/ENSSSCT00000070522.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066207.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066207.1" } ] } }, { "isoform_ac": "F1SFS4-1", "url": "https://www.uniprot.org/uniprotkb/F1SFS4/entry", "sequence": { "sequence": "MLVTAYLAFVVLLASCLGLELSRCRAKPSGRACSNPSFLRFQLDFYQVYFLALAADWLQAPYLYKLYQHYHFLEGQIAILYVCGLASTVLFGLVASSLVDWLGRKKSCVLFSLTYSLCCLTKLSQDYFVLLVGRALGGLSTALLFSAFEAWYIHEHVERHDFPAEWIPATFARAAFWNHVLAVMAGVAAEAVACWMGLGPVAPFVAAIPLLALAGALALHSWGENYDRQRAFSRTCAGGLRCLLSDRRVLLLGTIQALFESVIFIFVFLWTPVLDPHGAPLGIIFSSFMAASLLGSSLYRIATSKRYHLQPMHLLSFAVLIVVFSLFMLTFSTSPGQESPVESFIAFLLIELACGLYFPSMSFLRRKVIPDTEQTGVLNWFRVPLHLLACLGLLVLHDSDRKTGTRNMFSICSAVMVMALLAVVGLFTVVRHDAELRVPSPTGEPYAPEL", "length": 450, "header": "tr|F1SFS4-1|F1SFS4_PIG Computationally mapped isoform of Solute carrier family 61 member 1 OS=Sus scrofa OX=9823 GN=MFSD5 PE=3 SV=1 CANONICAL=A0A4X1W5W7-1" }, "locus": { "chromosome": "5", "start_pos": 18478498, "end_pos": 18477149, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039691.3", "url": "https://www.ensembl.org/id/ENSSSCT00000039691.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041839.1", "url": "https://www.ensembl.org/id/ENSSSCP00000041839.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W5W7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5W7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100157167", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157167", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1A628-1", "protein_name": "Solute carrier family 61 member 1", "gene_name": "MFSD5", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLLAAYASLAALLAAALGLELFSRRTPGPATNPAFARFQHRFLRAYLPALAADWLQGPYLYKLYHHYRFVEGQIAILYVCGFASAVLLGPPAALLVDRLGRRASCVLFSLSCAACCLTKLSRDYLVLAAGRVLGGLATALLFSAFEAWYVHEHVERHDFPAEWLAGTFARAAFWNNVLAVGAGVVATALAEWLGLGPVAPFMAAIPLLALAAVLVLKDWEENRGPPRALAKTCGDGLRCLLADGRVLLLGTVQALFESVVYIFIFLWTPVLDPHGPPLGIVFSSFMAASMLGSVLQRVAVSARYRLQPVHLLALAVLLAFLSLFMLTFSTGPGQESPAESFLAFLLLELACGLYFPSMGFLRRKVIPEKERAGVLHWFRVPLNLLACLGLLLLHGSDHRSGTRSIFALCAALMLLALLAVGRLFTVGRHDPELRLPPSQGPPESPEL", "length": 447 }, "evidence": [ { "id": "A0A4X1W5W7", "url": "https://omabrowser.org/oma/group/A0A4X1W5W7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3HV52-1", "protein_name": "Solute carrier family 61 member 1", "gene_name": "Mfsd5", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLVTAYLSFVGLLASCLGLELSRCRAKPPGRACSNPSFLQFQLDFYQVYFLALAADWLQAPYLYKLYQHYHFLEGQIAILYVCGLASTVLFGLVASSLVDWLGRKKSCVLFSLTYSLCCLTKLSQDYFVLLVGRALGGLSTALLFSAFEAWYIHEHVERHDFPAEWIPATFARAAFWNHVLAVAAGVAAEAVASWMGLGPVAPFVAAIPLLALAGALALRNWGENYDRQRAFSKTCAGGLRCLLSDRRVLLLGIIQALFESVIFIFVFLWTPVLDPHGAPLGIVFSSFMAASLLGSSLYRIATSKRYHLQPMHLLSLAVLIVVFSLFMLTFSTSPGQENPVESFIAFLLIELACGLYFPSMSFLRRKVIPETEQAGVLNWFRVPLHLLACLGLLVLHDSDRKTGTRNMFSICSAVMVMTLLAVVGLFTVVRHDAELRVPSPTGEPYAPEL", "length": 450 }, "evidence": [ { "id": "A0A4X1W5W7", "url": "https://omabrowser.org/oma/group/A0A4X1W5W7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q0VC03-1", "protein_name": "Solute carrier family 61 member 1", "gene_name": "SLC61A1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLVTAYLAFVVLLASCLGLELSRCRAKPSGRACSNPSFLRFQLDFYQVYFLALAADWLQAPYLYKLYQHYHFLEAQIAILYVCGLASTVLFGLVASSLVDWLGRKKSCVLFSLTYSLCCLTKLSRDYFVLLVGRALGGLSTALLFSAFEAWYIHEHLERHDFPTEWIPATFARAAFWNHVLAVAAGVAAEAVACWMGLGPVAPFVAAIPLLALAGALALHNWGENYDRQRAFSRTCAGGLRCLLSDRRVLLLGTIQALFESVIFIFVFLWTPVLDPHGAPLGIIFSSFMAASLLGSSLYRIATSKRYHLQPMHLLSLAVLIVVFSLFMLTFSTSPGQESPVESFIAFLLIELACGLYFPSMSFLRRKVIPETEQAGVLNWFRVPLHLLACLGLLVLHDSDRKTGTRNMFSICSAVMVMALLAVVGLFTVVRHDAELRVPSPTGEPYTPEL", "length": 450 }, "evidence": [ { "id": "A0A4X1W5W7", "url": "https://omabrowser.org/oma/group/A0A4X1W5W7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q54QU6-1", "protein_name": "Solute carrier family 61 member 1", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDFLFQFFITSLICGGLQFYIYSKKDNNNTTTTTNNNNNINNNNNNNSTLLDIGRNEEPNKKGEIDKSNFLTENEEKQFKKFQNKYLLTYLLAMASDWLQGPYVYVLYESYGFTKQEIAILFIFGFLSSLIFGMAVGPVIDKYGRKRMGILFGILYGLSCLTKVINNFSILLIGRLLGGIATSLLFSVFESWMIAEHNSRGFKEELLSSTFYKSSLLNGLVAIGSGLFASEVANRWGYVSPFLWAFSLLVTCSILIATQWNENYGDSSSPLVTTLKTSIQSLINDPAIISLGTVQSLFEASMYTFVFMWTPTLLESSDLLNVQLPFGLIFATFMVCVMIGSSIFNLFQKILKPEILIQYILLLSSICFIIPFFFNNSFIIYLSFLFFEILCGCYFPCAGTLRSKYIPESIRATVMNLFRVPLNLLVVTILVNIERISNQGIFLTCSIWLMIALIYYKISISKSQELIKVNK", "length": 471 }, "evidence": [ { "id": "A0A4X1W5W7", "url": "https://omabrowser.org/oma/group/A0A4X1W5W7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q6DG19-1", "protein_name": "Solute carrier family 61 member 1", "gene_name": "slc61a1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MFVTAYLAFIVLAGLCVALEITARRLTLSQATQTAVANPAFQRFQKLFLKAYLLALWADWLQGPYLYKLYRHYNFLESQIAILYVCGLASCVLFAPVAGWLPQFLGRRQTCLLFCLAYSVCCITKLSQDYFMLILGRVLGGLSTSLLTTTFEAWYVHGHVDIHDFPKEWIPVTFGKVANWNYGLAVGAGLVANLFAEWLGLGPVAPFLLAIPSLAACAWFVLSEWGQEDKQEGMNGDKNAPLLNSLNTPKLQLSARARFWRSCVDGLRCLLSDRRVMLLGGVQALFESVLYIFVFLWTPVLDPHGPPLGIVFSSLMAATMAGSTLFRLATSAPYRLQPGHLLCLAILLAFFSFFMLTFSTVPGQPRPRESLLAFLLLELACGLYFPAVSFLQGRVVPVERRAAVLAWFRLPLHLLACLGLLALHGEVSGSGAGEAGSGTRHMFAGCAGMMLAALLAVISLFTVGRNDADLRLEGPKLEGEI", "length": 481 }, "evidence": [ { "id": "A0A4X1W5W7", "url": "https://omabrowser.org/oma/group/A0A4X1W5W7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q6N075-1", "protein_name": "Solute carrier family 61 member 1", "gene_name": "SLC61A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLVTAYLAFVGLLASCLGLELSRCRAKPPGRACSNPSFLRFQLDFYQVYFLALAADWLQAPYLYKLYQHYYFLEGQIAILYVCGLASTVLFGLVASSLVDWLGRKNSCVLFSLTYSLCCLTKLSQDYFVLLVGRALGGLSTALLFSAFEAWYIHEHVERHDFPAEWIPATFARAAFWNHVLAVVAGVAAEAVASWIGLGPVAPFVAAIPLLALAGALALRNWGENYDRQRAFSRTCAGGLRCLLSDRRVLLLGTIQALFESVIFIFVFLWTPVLDPHGAPLGIIFSSFMAASLLGSSLYRIATSKRYHLQPMHLLSLAVLIVVFSLFMLTFSTSPGQESPVESFIAFLLIELACGLYFPSMSFLRRKVIPETEQAGVLNWFRVPLHSLACLGLLVLHDSDRKTGTRNMFSICSAVMVMALLAVVGLFTVVRHDAELRVPSPTEEPYAPEL", "length": 450 }, "evidence": [ { "id": "A0A4X1W5W7", "url": "https://omabrowser.org/oma/group/A0A4X1W5W7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q921Y4-1", "protein_name": "Solute carrier family 61 member 1", "gene_name": "Slc61a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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"MKDNFTLVTISKNITSSLHVGLVNISGNESTFNCSHKPSDKHLDAIPILYYIIFVVGFLVNTIVVTLFCCQKGPKKVSSIYIFNLAVADLLLLATLPLWATYYSYRYDWLFGPVMCKVFGSFLTLNMFASIFFITCMSVDRYQSVIYPFLSQRRNPWQASYIVPLVWCMACLSSLPTFYFRDVRTIEYLGVNACIMAFPPEKYAQWSAGIALMKNILGFIIPLIFIATCYFGIRKHLLKTNSYGKNRITRDQVLNMAAAVVLAFIICWLPFHVLTFLDALAWMGIINSCEVIAVIDLALPFAILLGFTNSCINPFLYCFVGNRFQQKLRRVFRVPITWLQGKRESVSCRKSSSLREMETFVS", "length": 362, "header": "tr|A0A4X1W622-1|A0A4X1W622_PIG Isoform 1 of Type-2 angiotensin II receptor OS=Sus scrofa OX=9823 GN=AGTR2 PE=3 SV=1 CANONICAL=A0A4X1W622-1" }, "isoforms": [ { "isoform_ac": "A0A4X1W622-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W622/entry", "sequence": { "sequence": 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"field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1W654-1", "uniprot_ac": "A0A4X1W654", "uniprot_id": "A0A4X1W654_PIG", "mass": { "chemical_mass": 79684.0, "monoisotopic_mass": 79684.0 }, "refseq": { "ac": "XP_003134813", "name": "transmembrane protein 168", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134813" }, "gene_names": [ { "name": "TMEM168", "type": "recommended", "evidence": [ { "id": "A0A4X1W654", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W654" } ] }, { "name": "TMEM168", "type": "synonym", "evidence": [ { "id": "XP_003134813", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134813" } ] } ], "protein_names": [ { "name": "Transmembrane protein 168", "type": "recommended", "evidence": [ { "id": "A0A4X1W654", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W654/entry#names_and_taxonomy" } ] }, { "name": "transmembrane protein 168", "type": "synonym", "evidence": [ { "id": "XP_003134813", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134813" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W654", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W654" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TMEM168", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W654", "locus": { "chromosome": "18", "start_pos": 32957960, "end_pos": 32927748, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016643", "url": "https://www.ensembl.org/id/ENSSSCG00000016643" } ] } } ], "crossref": [ { "id": "A0A4X1W654", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1W654", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd21494", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd21494", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100518941", "url": "https://www.ncbi.nlm.nih.gov/gene/100518941", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR029713", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029713", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100518941", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518941", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VNDQYIA", "url": "https://omabrowser.org/oma/group/VNDQYIA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1W654", "url": "https://www.orthodb.org/?gene=A0A4X1W654", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14437", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14437", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14437:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14437:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "XP_003134813", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134813", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1W654", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W654", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W654-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W654-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MCKSLRYCFSHCLYLAMTRLGEVNKEVNMHSSVRYLGYLARINLLVAICLGLYVRWEKIANSLILVIFILGLFVLGIASILYYYFSMEAASLSLSNLWFGFLLGLLCFLDNSSFKNDVKEESTKYLLLTSIVLRILCSLVERISGYVRHRPTLLTTVEFLELVGFAIASTTMLVEKSLSVILLVVALAMLIIDLRMKSFLAIPNLVIFSVLLFFSSLETPKNPVAFACFFICLITDPFLDIYFSGLSVTERWKPFLYRGRICRRLSVVFTGMIELTFFILSAFKLRDTHLWYFVIPGFSIFGIFWMICHIIFLLTLWGFHTKLNDCHKVYFTHRIDNNSLDRIMASKGMRHFCLISEQLVFFSLLATAILGAVSWQPTNGIFLSMFLIVLPLESMAHGLFHELGNCLGGTSVGYAIVIPTNFCSPDGQPTLLPPEHVQELNLRSTGMLNAIQRFFAYHMIETYGCDYSTSGLSFDTLHSKLKAFLELRTVDGPRHDTYILYYSGHTHGTGEWALAGGDILRLDTLLEWWREKNGSFCSRLIIILDSENSIPWVKEVRKINDQYIAVQGAELTKPVDIEEADPPQLGDFTKDWVEYNCNSSNNICWTEKGRTVKAVYGVSKRWSDYTLHLPTGSDVAKHWMLHFPRITYPLVHLANWLCGLNLFWICKTCFRCLKRLKMSWFLPTVLDTGQGFKLVKS", "length": 697, "header": "tr|A0A4X1W654-1|A0A4X1W654_PIG Isoform 1 of Transmembrane protein 168 OS=Sus scrofa OX=9823 GN=TMEM168 PE=3 SV=1 CANONICAL=A0A4X1W654-1" }, "isoforms": [ { "isoform_ac": "A0A4X1W654-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W654/entry", "sequence": { "sequence": "MCKSLRYCFSHCLYLAMTRLGEVNKEVNMHSSVRYLGYLARINLLVAICLGLYVRWEKIANSLILVIFILGLFVLGIASILYYYFSMEAASLSLSNLWFGFLLGLLCFLDNSSFKNDVKEESTKYLLLTSIVLRILCSLVERISGYVRHRPTLLTTVEFLELVGFAIASTTMLVEKSLSVILLVVALAMLIIDLRMKSFLAIPNLVIFSVLLFFSSLETPKNPVAFACFFICLITDPFLDIYFSGLSVTERWKPFLYRGRICRRLSVVFTGMIELTFFILSAFKLRDTHLWYFVIPGFSIFGIFWMICHIIFLLTLWGFHTKLNDCHKVYFTHRIDNNSLDRIMASKGMRHFCLISEQLVFFSLLATAILGAVSWQPTNGIFLSMFLIVLPLESMAHGLFHELGNCLGGTSVGYAIVIPTNFCSPDGQPTLLPPEHVQELNLRSTGMLNAIQRFFAYHMIETYGCDYSTSGLSFDTLHSKLKAFLELRTVDGPRHDTYILYYSGHTHGTGEWALAGGDILRLDTLLEWWREKNGSFCSRLIIILDSENSIPWVKEVRKINDQYIAVQGAELTKPVDIEEADPPQLGDFTKDWVEYNCNSSNNICWTEKGRTVKAVYGVSKRWSDYTLHLPTGSDVAKHWMLHFPRITYPLVHLANWLCGLNLFWICKTCFRCLKRLKMSWFLPTVLDTGQGFKLVKS", "length": 697, "header": "tr|A0A4X1W654-1|A0A4X1W654_PIG Isoform 1 of Transmembrane protein 168 OS=Sus scrofa OX=9823 GN=TMEM168 PE=3 SV=1 CANONICAL=A0A4X1W654-1" }, "locus": { "chromosome": "18", "start_pos": 32957876, "end_pos": 32932813, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061311.3", "url": "https://www.ensembl.org/id/ENSSSCT00000061311.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041190.1", "url": "https://www.ensembl.org/id/ENSSSCP00000041190.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W654", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W654" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100518941", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518941", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3L7IM98-1", "protein_name": "Transmembrane protein 168", "gene_name": "Tmem168", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MCKSLRYCFSHCLYLAMTRLEEVNREVNMHSSVRYLGYLARLNLLVAICLGLYVRWEKTANSLILVIFILGLFVLGIASILYYYFSMEAASLSLSNLWFGFLLGLLCFLDNSSFKNDVKEESTKYLLLTSIVLRVLCALVERVSGYVRHRPTLLTTVEFLELVGFAIASTTMLVEKSLSVILLVVALAMLIIDLRMKSFLAILNLIIFSVLLFVSSLETPKNPIAFACFFICLVTDPFLDIYFSGLSVTERWKPFLYRGRICRRLSVVFIGMIELTFFILSAFKLRDTHLWYFVIPGFSIFGIFWMICHIIFLLTLWGFHTKLNDCHKVYISHRADNNSLDRIMASKGMRHFCLISEQLVFFSLLATAILGAVSWQPTNGIFLSMFLIVLPLESLAHGLFHELGNCLGGTSVGYAIVIPTNFCSPDGQPTLLPPEHVQELNLRSTGMLNGIQRFFAYHMIETYGCDYSTSGLSFDTLHSKLKAFLELRTVDGPRHDTYVLYYSGHTHGSGEWALAGGDILRLDTLLEWWREKNGSFCSRLIIILDSENSTPWVKEVRKINDQYIAVQGAELAKTVDIEEADLPQLGDFTKDWVEYNCNPSNNICWTEKGRTVKAMYGVSKRWSDYTLHLPTGSDVAKHWMLHFPRITYPLVHLANWLCGLNLFWICKTCFRCLKRLKMSWFLPTVLDTGQGFKLVKS", "length": 697 }, "evidence": [ { "id": "A0A4X1W654", "url": "https://omabrowser.org/oma/group/A0A4X1W654/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8V0X8Q5-1", "protein_name": "Transmembrane protein 168", "gene_name": "TMEM168", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MCGSLRYCVSHCLYAAMTRLEEANREVNMHSSVRYLGCLARINLLAAIFVGLYVRWEKTADALILVIFILGLFVLGIASILYYYFSMETASLSLSNLWFGFLLGLLCFLNNSAFKNDVKEEATNNLLLSAIVLRVLCSLVERICGCIHHRPTLLTTAEFLELVGFAIASTIMLVEKSMSIILLVMALAMLIIDLRMKSFLAIPNLAIFGAIASLLFFPSLRIPTNPFALACFFSCLISDPLLDVYFSGLSVTERWKPYLYRGKICRRLSVISIGVVELIFFILAAFKLRYLDLWYFVIPGFSVFGIFWMICHVIFFITLWGFHTKLNDCHKVYYTHCAENNSLDRVMASKGMRHFCLISKQLVFFSLLATAVLGAVSWQPTNGIFMSAFLIVLPLESMAHGLFHELGNCLGGTCVGYAVVIPTNFCSPDGQPTLLPPDHVQELNLRSTGMLNAIQRFFAYHMIETYGCDYSTSGLSFDTLHSKIKSFLELRTADGPRHDTYILYYSGHSHGSGEWALAGGDALRLDTLLEWWREKNGTFCSRLIIVLDCENSQPWVKEVRKVNDQYVAVQGAEMARIVDVEEADPPQLGDFTRQWVEYNCNPNSNISWSEKGRTVKAVYGVSKRWSDYTLHLPTGSDVAKHWMIYFPRVTYPLVHLANWFCGLNMFWVCKACFRCLKRLKMIWFLPTVLDTGQGFKLVKS", "length": 700 }, "evidence": [ { "id": "A0A4X1W654", "url": "https://omabrowser.org/oma/group/A0A4X1W654/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0JNG0-1", "protein_name": "Transmembrane protein 168", "gene_name": "TMEM168", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MCKSLRYCFSHCLYLAMTRLEEVNREVNMHSSVRYLGYLARINLLVAICLGLYVRWEKTANSLILVIFILGLFVLGIASILYYYFSMETASLSLSNLWFGFLLGFLCFLDNSSFKNDVKEESTKYLLLTSIVLRILCSLVERMSGYVRHRPTLLTTVEFLELVGFAIASTTMLVEKSLSVILLVVALAMLIIDLRMKSFLALPNLVIFAVLLFFSSLETPKNPVAFACFFICLITDPFLDIYFSGLSVTERWKPFLYRGRICRRLSVVFTGMIELTFFILSAFKLRDTHLWYFVIPGFSIFGIFWMICHIIFLLTLWGFHTKLNDCHKVCFTHRVDNNSLDRIMASKGMRHFCLISEQLVFFSLLATAILGAVSWQPTNGIFLSMFLIVLPLESMAHGLFHELGSCLGGTSVGYAIVIPTNFCSPDGQPTLLPPEHVQELNLRSTGMLNAIQRFFAYHMIETYGCDYSTSGLSFDTLHSKLKAFLELRTVDGPRHDTYVLYYSGHTHGTGEWALAGGDILRLDTLLEWWREKNGSFCSRLIIILDSENSTPWVKEVRKINDQYIAVQGAEMTKTIDIEEADPPQLGDFTKDWVEYNCNTTNNICWTEKGRTVKAIYGVSKRWSDYTLHLPTGSDVAKHWMLYFPRITYPLVHLANWLCGLNLFWICKTCFRCLKRLKMSWFLPAVLDTGQGFKLVKS", "length": 697 }, "evidence": [ { "id": "A0A4X1W654", "url": "https://omabrowser.org/oma/group/A0A4X1W654/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5PQM0-1", "protein_name": "Transmembrane protein 168", "gene_name": "Tmem168", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCKSLRYCFSHCLYLAMTRLEEVNREVNMHSSVRYLGYLARFNLLVAICLGLYVRWEKTANSLILVIFILGLFVLGIASILYYYFSMEAASLSLSNLWFGFLLGLLCFLDNSSFKSDVKEETTKYLLLTSIVLRILCALVERLSGYVRHRPTLLTTVEFLELVGFAIASTTMLVERSLSVILLVMALAMLIIDLRMKSFLAIPNLIIFSVLLFFSSLETPQNPIAFACFFICLITDPFLDIYFSGLSVTERWKPFLYRGRICRRLSVVFTGMIELTFFTLSAFKLRDTHLWYFVIPGFSIFGIFWMICHIIFLLTLWGFHTKLNDCHKVYINHRADNNSLDRIMASKGMRHFCLISEQLVFFSLLATAILGAVSWQPTNGIFLSMFLIVLPLESMAHGLFHELGNCLGGTSVGYAIVIPTNFCSPDGQPTLLPPEHVQELNLRSTGMLNAIQRFFAYHMIETYGCDYSTSGLSFDTLHSKLKAFLELRTVDGPRHDTYVLYYSGHTHGSGEWALAGGDILRLDTLLEWWREKNGSFCSRLIIILDSENSTPWVKEVRKINDQYVAVQGAELAKTVDIEEADPPQLGDFTRDWVEYNCNSTNNICWTEKGRTVKAMYGVSKRWSDYTLHLPTGSDVAKHWMLHFPRITYPLVHLANWLCGLNLFWMCKACFRCLKRLKMSWFLPTVLDTGQGFKLVKS", "length": 697 }, "evidence": [ { "id": "A0A4X1W654", "url": "https://omabrowser.org/oma/group/A0A4X1W654/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q91VX9-1", "protein_name": "Transmembrane protein 168", "gene_name": "Tmem168", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCRSLRYCVSHCLYLAMTRLEEVNREVNMHSSVRYLGYLARINLLVAICLGLYVRWEKTANSLILVIFILGLFVLGIASILYYYFSMEAASLSLSNLWFGFLLGLLCFLDNSSFKSDVKEETTKYLLLTSIVLRILCALVERISGYVRHRPTLLTTVEFLELVGFAIASTTMLVEKSLSVILLVMALAMLIIDLRMKSFLAIPNLIIFSVLLFFSSLETPQNPIAFACFFICLVTDPFLDIYFSGLSVTERWKPFLHRGRICRRLSVLFTAMIELTFFILSAFKLRDTHLWYFVIPGFSIFGFFWMICHIIFLLTLWGFHTKLNDCHKVYINHRADNNSLDRIMASKGMRHFCLISEQLVFFSLLATAILGAVSWQPTNGIFLSMFLIVLPLESMAHGLFHELGNCLGGTSVGYAIVIPTNFCSPDGQPTLLPPEHVQELNLRSTGMLNAIQRFFAYHMIETYGCDYSTSGLSFDTLHSKLKAFLELRTVDGPRHDTYVLYYSGHTHGSGEWALAGGDILRLDTLLEWWREKNGSFCSRLIIILDSENSTPWVKEVRKINDQYVAVQGAELAKTVDIEEADPPQLGDFTRDWVEYNCNSTNNICWTEKGRTVRAVYGVSKRWSDYTLHLPTGSDVAKHWMLHFPRVTYPLVHLANWLCGLNLFWVCKACFRCLKRLKMSWFLPTVLDTGQGFKLVKS", "length": 697 }, "evidence": [ { "id": "A0A4X1W654", "url": "https://omabrowser.org/oma/group/A0A4X1W654/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H0V1-1", "protein_name": "Transmembrane protein 168", "gene_name": "TMEM168", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MCKSLRYCFSHCLYLAMTRLEEVNREVNMHSSVRYLGYLARINLLVAICLGLYVRWEKTANSLILVIFILGLFVLGIASILYYYFSMEAASLSLSNLWFGFLLGLLCFLDNSSFKNDVKEESTKYLLLTSIVLRILCSLVERISGYVRHRPTLLTTVEFLELVGFAIASTTMLVEKSLSVILLVVALAMLIIDLRMKSFLAIPNLVIFAVLLFFSSLETPKNPIAFACFFICLITDPFLDIYFSGLSVTERWKPFLYRGRICRRLSVVFAGMIELTFFILSAFKLRDTHLWYFVIPGFSIFGIFWMICHIIFLLTLWGFHTKLNDCHKVYFTHRTDYNSLDRIMASKGMRHFCLISEQLVFFSLLATAILGAVSWQPTNGIFLSMFLIVLPLESMAHGLFHELGNCLGGTSVGYAIVIPTNFCSPDGQPTLLPPEHVQELNLRSTGMLNAIQRFFAYHMIETYGCDYSTSGLSFDTLHSKLKAFLELRTVDGPRHDTYILYYSGHTHGTGEWALAGGDTLRLDTLIEWWREKNGSFCSRLIIVLDSENSTPWVKEVRKINDQYIAVQGAELIKTVDIEEADPPQLGDFTKDWVEYNCNSSNNICWTEKGRTVKAVYGVSKRWSDYTLHLPTGSDVAKHWMLHFPRITYPLVHLANWLCGLNLFWICKTCFRCLKRLKMSWFLPTVLDTGQGFKLVKS", "length": 697 }, "evidence": [ { "id": "A0A4X1W654", "url": "https://omabrowser.org/oma/group/A0A4X1W654/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nuclear 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smooth muscle", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020943030" }, "gene_names": [ { "name": "ACTG2", "type": "recommended", "evidence": [ { "id": "A0A4X1W7T6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7T6" } ] }, { "name": "ACTG2", "type": "synonym", "evidence": [ { "id": "XP_020943030", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020943030" } ] } ], "protein_names": [ { "name": "Actin gamma 2, smooth muscle", "type": "synonym", "evidence": [ { "id": "A0A4X1W7T6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7T6/entry#names_and_taxonomy" } ] }, { "name": "actin, gamma-enteric smooth muscle", "type": "synonym", "evidence": [ { "id": "XP_020943030", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020943030" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W7T6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7T6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ACTG2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7T6", "locus": { "chromosome": "3", "start_pos": 69096782, "end_pos": 69121351, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008294", "url": "https://www.ensembl.org/id/ENSSSCG00000008294" } ] } } ], "crossref": [ { "id": "cd10224", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd10224", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100520667", "url": "https://www.ncbi.nlm.nih.gov/gene/100520667", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004000", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004000", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004001", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004001", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020902", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020902", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043129", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043129", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100520667", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520667", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PXEREIV", "url": "https://omabrowser.org/oma/group/PXEREIV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1W7T6", "url": "https://www.orthodb.org/?gene=A0A4X1W7T6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11937", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11937", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00022", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00022", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-445355", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-445355", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9764561", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9764561", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9913351", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9913351", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9958825", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9958825", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020943030", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020943030", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1W6P1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W6P1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W6P1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W6P1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W7T1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7T1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W7T1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7T1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W7T6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7T6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W7T6-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7T6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W7U3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7U3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W7U3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7U3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W7V5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7V5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W7V5-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7V5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W8S5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W8S5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W8S5-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W8S5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0XCV9", "url": "https://www.uniprot.org/uniprotkb/A0A8D0XCV9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0XCV9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0XCV9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1SLA8", "url": "https://www.uniprot.org/uniprotkb/A0A8D1SLA8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1SLA8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1SLA8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FCZ8", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCZ8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FCZ8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCZ8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FNX1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FNX1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FNX1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FNX1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPEYDEAGPSIVHRKCF", "length": 376, "header": "tr|A0A4X1W7T6-1|A0A4X1W7T6_PIG Isoform 1 of Actin gamma 2, smooth muscle OS=Sus scrofa OX=9823 GN=ACTG2 PE=1 SV=1 CANONICAL=A0A4X1W7T6-1" }, "isoforms": [ { "isoform_ac": "A0A4X1W6P1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W6P1/entry", "sequence": { "sequence": "MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPEYDEAGPSIVHRKCF", "length": 333, "header": "tr|A0A4X1W6P1-1|A0A4X1W7T6_PIG Computationally mapped isoform of Actin gamma 2, smooth muscle OS=Sus scrofa OX=9823 GN=ACTG2 PE=1 SV=1 CANONICAL=A0A4X1W7T6-1" }, "locus": { "chromosome": "3", "start_pos": 69111814, "end_pos": 69097447, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076210.1", "url": "https://www.ensembl.org/id/ENSSSCT00000076210.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064185.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064185.1" } ] } }, { "isoform_ac": "A0A4X1W7T1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7T1/entry", "sequence": { "sequence": "MGSGPKAKEPTSNVTLTHGRLLFFSPTPKVLQPPVHSAALTMCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPEYDEAGPSIVHRKCF", "length": 417, "header": "tr|A0A4X1W7T1-1|A0A4X1W7T1_PIG Computationally mapped isoform of Actin gamma 2, smooth muscle OS=Sus scrofa OX=9823 GN=ACTG2 PE=1 SV=1 CANONICAL=A0A4X1W7T6-1" }, "locus": { "chromosome": "3", "start_pos": 69111937, "end_pos": 69097447, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064546.2", "url": "https://www.ensembl.org/id/ENSSSCT00000064546.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055602.1", "url": "https://www.ensembl.org/id/ENSSSCP00000055602.1" } ] } }, { "isoform_ac": "A0A4X1W7T6-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7T6/entry", "sequence": { "sequence": "MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPEYDEAGPSIVHRKCF", "length": 376, "header": "tr|A0A4X1W7T6-1|A0A4X1W7T6_PIG Isoform 1 of Actin gamma 2, smooth muscle OS=Sus scrofa OX=9823 GN=ACTG2 PE=1 SV=1 CANONICAL=A0A4X1W7T6-1" }, "locus": { "chromosome": "3", "start_pos": 69111814, "end_pos": 69097447, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079845.2", "url": "https://www.ensembl.org/id/ENSSSCT00000079845.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061522.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061522.1" } ] } }, { "isoform_ac": "A0A4X1W7U3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7U3/entry", "sequence": { "sequence": "MAVLQPPVHSAALTMCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPEYDEAGPSIVHRKCF", "length": 390, "header": "tr|A0A4X1W7U3-1|A0A4X1W7U3_PIG Computationally mapped isoform of Actin gamma 2, smooth muscle OS=Sus scrofa OX=9823 GN=ACTG2 PE=1 SV=1 CANONICAL=A0A4X1W7T6-1" }, "locus": { "chromosome": "3", "start_pos": 69119927, "end_pos": 69097447, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000009083.5", "url": "https://www.ensembl.org/id/ENSSSCT00000009083.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008854.3", "url": "https://www.ensembl.org/id/ENSSSCP00000008854.3" } ] } }, { "isoform_ac": "A0A4X1W7V5-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W7V5/entry", "sequence": { "sequence": "MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSMWISKPEYDEAGPSIVHRKCF", "length": 360, "header": "tr|A0A4X1W7V5-1|A0A4X1W7V5_PIG Computationally mapped isoform of Actin gamma 2, smooth muscle OS=Sus scrofa OX=9823 GN=ACTG2 PE=3 SV=1 CANONICAL=A0A4X1W7T6-1" }, "locus": { "chromosome": "3", "start_pos": 69111814, "end_pos": 69097447, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068159.2", "url": "https://www.ensembl.org/id/ENSSSCT00000068159.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064151.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064151.1" } ] } }, { "isoform_ac": "A0A4X1W8S5-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W8S5/entry", "sequence": { "sequence": "MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKVLIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPEYDEAGPSIVHRKCF", "length": 341, "header": "tr|A0A4X1W8S5-1|A0A4X1W7T6_PIG Computationally mapped isoform of Actin gamma 2, smooth muscle OS=Sus scrofa OX=9823 GN=ACTG2 PE=1 SV=1 CANONICAL=A0A4X1W7T6-1" }, "locus": { "chromosome": "3", "start_pos": 69111814, "end_pos": 69097447, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075630.2", "url": "https://www.ensembl.org/id/ENSSSCT00000075630.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069408.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069408.1" } ] } }, { "isoform_ac": "A0A8D0XCV9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0XCV9/entry", "sequence": { "sequence": "MPEREGPPLPWNGALAVLQPPVHSAALTMCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPEYDEAGPSIVHRKCF", "length": 404, "header": "tr|A0A8D0XCV9-1|A0A4X1W7T6_PIG Computationally mapped isoform of Actin gamma 2, smooth muscle OS=Sus scrofa OX=9823 GN=ACTG2 PE=1 SV=1 CANONICAL=A0A4X1W7T6-1" }, "locus": { "chromosome": "3", "start_pos": 69111989, "end_pos": 69097447, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052319.2", "url": "https://www.ensembl.org/id/ENSSSCT00000052319.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035875.2", "url": "https://www.ensembl.org/id/ENSSSCP00000035875.2" } ] } }, { "isoform_ac": "A0A8D1SLA8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1SLA8/entry", "sequence": { "sequence": "MPEREGPPLPWNGALAVLQPPVHSAALTMCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPEYDEAGPSIVHRKCF", "length": 340, "header": "tr|A0A8D1SLA8-1|A0A4X1W7T6_PIG Computationally mapped isoform of Actin gamma 2, smooth muscle OS=Sus scrofa OX=9823 GN=ACTG2 PE=1 SV=1 CANONICAL=A0A4X1W7T6-1" }, "locus": { "chromosome": "3", "start_pos": 69111989, "end_pos": 69097447, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": 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B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W8S5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W8S5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100520667", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520667", "resource": "KEGG Pathway" }, { "id": "R-SSC-445355", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-445355", "resource": "Reactome", "description": "Smooth Muscle Contraction" }, { "id": "R-SSC-9764561", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9764561", "resource": "Reactome", "description": "Regulation of CDH1 Function" }, { "id": "R-SSC-9913351", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9913351", "resource": "Reactome", "description": "Formation of the dystrophin-glycoprotein complex (DGC)" }, 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Acts specifically on glutathione, but not on other gamma-glutamyl peptides.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W6T0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W6T0#function" }, { "database": "UniProtKB", "id": "RU363081", "url": "https://www.uniprot.org/uniprotkb/RU363081#function" }, { "database": "UniProtKB", "id": "ARBA00045227", "url": "https://www.uniprot.org/uniprotkb/ARBA00045227#function" }, { "database": "UniProtKB", "id": "A0A4X1WC75", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WC75#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W6T0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W6T0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CHAC2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W6T0", "locus": { "chromosome": "3", "start_pos": 87405978, "end_pos": 87416260, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000037577", "url": "https://www.ensembl.org/id/ENSSSCG00000037577" } ] } } ], "crossref": [ { "id": "A0A4X1W6T0", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1W6T0", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd06661", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06661", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100517647", "url": "https://www.ncbi.nlm.nih.gov/gene/100517647", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006840", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006840", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036568", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036568", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100517647", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517647", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DHREKDG", "url": "https://omabrowser.org/oma/group/DHREKDG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1WC75", "url": "https://www.orthodb.org/?gene=A0A4X1WC75", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12192", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12192", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12192:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12192:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04752", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04752", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-174403", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174403", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020943891", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020943891", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "47724", "url": "https://www.rhea-db.org/rhea/47724", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1W6T0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W6T0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W6T0-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W6T0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1WC75", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WC75", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1WC75-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WC75-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MWVFGYGSLIWKVDFPYQDKLVGYITGYSRRFWQGSTDHRGVPGKGCVWGVAYRLPVGKEEEVKAYLDFREKGGYRTTTVNFYPKDSTTEPFSVLLYIGRCDNPNYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELANSIRSLVPEDADEHLFSLEKLVKERLEEKQNFSCLKRPNH", "length": 177, "header": "tr|A0A4X1W6T0-1|A0A4X1W6T0_PIG Isoform 1 of Gamma-glutamylcyclotransferase OS=Sus scrofa OX=9823 GN=CHAC2 PE=3 SV=1 CANONICAL=A0A4X1W6T0-1" }, "isoforms": [ { "isoform_ac": "A0A4X1W6T0-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W6T0/entry", "sequence": { "sequence": "MWVFGYGSLIWKVDFPYQDKLVGYITGYSRRFWQGSTDHRGVPGKGCVWGVAYRLPVGKEEEVKAYLDFREKGGYRTTTVNFYPKDSTTEPFSVLLYIGRCDNPNYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELANSIRSLVPEDADEHLFSLEKLVKERLEEKQNFSCLKRPNH", "length": 177, "header": "tr|A0A4X1W6T0-1|A0A4X1W6T0_PIG Isoform 1 of Gamma-glutamylcyclotransferase OS=Sus scrofa OX=9823 GN=CHAC2 PE=3 SV=1 CANONICAL=A0A4X1W6T0-1" }, "locus": { "chromosome": "3", "start_pos": 87416105, "end_pos": 87406673, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053708.2", "url": "https://www.ensembl.org/id/ENSSSCT00000053708.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034560.1", "url": "https://www.ensembl.org/id/ENSSSCP00000034560.1" } ] } }, { "isoform_ac": "A0A4X1WC75-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WC75/entry", "sequence": { "sequence": "MWVFGYGSLIWKVDFPYQDKLVGYITGYSRRFWQGSTDHRGVPGKPGRVVTLVEDPGGCVWGVAYRLPVGKEEEVKAYLDFREKGGYRTTTVNFYPKDSTTEPFSVLLYIGRCDNPNYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELANSIRSLVPEDADEHLFSLEKLVKERLEEKQNFSCLKRPNH", "length": 189, "header": "tr|A0A4X1WC75-1|A0A4X1WC75_PIG Computationally mapped isoform of Gamma-glutamylcyclotransferase OS=Sus scrofa OX=9823 GN=CHAC2 PE=3 SV=1 CANONICAL=A0A4X1W6T0-1" }, "locus": { "chromosome": "3", "start_pos": 87416105, "end_pos": 87406673, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045031.3", "url": "https://www.ensembl.org/id/ENSSSCT00000045031.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051521.1", "url": "https://www.ensembl.org/id/ENSSSCP00000051521.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W6T0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W6T0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100517647", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517647", "resource": "KEGG Pathway" }, { "id": "R-SSC-174403", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174403", "resource": "Reactome", "description": "Glutathione synthesis and recycling" } ], "orthologs": [ { "uniprot_canonical_ac": "F1NE73-1", "protein_name": "Gamma-glutamylcyclotransferase", "gene_name": "CHAC2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MWVFGYGSLIWKVDFPYQEKMVGRIRGYSRRFWQGSTDHRGVPGKPGRVVTLVEDPEGCVWGVAYRLPAGQECEVKAYLDFREKGGYRTTTVVFYPKDSSIKPFDVLLYIGTRDNPNYLGPAPLQEIAEQIIDAVGPSGRNTEYLFELANSMRNLVPEDVDEHLFSLEKLVKELLEKEQNLNCL", "length": 184 }, "evidence": [ { "id": "A0A4X1W6T0", "url": "https://omabrowser.org/oma/group/A0A4X1W6T0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3HFL4-1", "protein_name": "Gamma-glutamylcyclotransferase", "gene_name": "Chac2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MWVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPGGSVWGVAYKLPVGKEEEVKTYLDFREKGGYRTTTVIFYPKDTTKKPFSVLLYIGTCDNPNYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELADSIRKLVPEDADEHLFSLEKLVKERLEGK", "length": 178 }, "evidence": [ { "id": "A0A4X1W6T0", "url": "https://omabrowser.org/oma/group/A0A4X1W6T0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P32656-1", "protein_name": "Glutathione-specific gamma-glutamylcyclotransferase", "gene_name": "GCG1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTNDNSGIWVLGYGSLIYKPPSHYTHRIPAIIHGFARRFWQSSTDHRGTPANPGRVATLIPYEDIIRQTAFLKNVNLYSESAPIQDPDDLVTIGVVYYIPPEHAQEVREYLNVREQNGYTLHEVEVHLETNREHEAELGEALEQLPRHNKSGKRVLLTSVYIGTIDNEAFVGPETVDETAKVIAVSHGPSGSNYEYLAKLEQALAQMPIMKERGRITDHYLTALLETVNKYR", "length": 232 }, "evidence": [ { "id": "A0A4X1W6T0", "url": "https://omabrowser.org/oma/group/A0A4X1W6T0/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q0IIH4-1", "protein_name": "Putative glutathione-specific gamma-glutamylcyclotransferase 2", "gene_name": "CHAC2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MWVFGYGSLIWKVDFPYQDKLVGYISGYSRRFWQGSTDHRGVPGKGSVWGVAYKLPVGKEEEVKAYLDFREKGGYRTTTVIFYPKDSTTEPFSVLLYIGTRDNPNYLGPAPLEDIAEQIFNAAGPSGKNTEYLFELANSMRSLVPEDADEHLFSLEKLVKERLEGKQNFNCIKRPN", "length": 176 }, "evidence": [ { "id": "A0A4X1W6T0", "url": "https://omabrowser.org/oma/group/A0A4X1W6T0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q4KMJ1-1", "protein_name": "Putative glutathione-specific gamma-glutamylcyclotransferase 2", "gene_name": "chac2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MWVFGYGSLIWKVDFPYEDKRVGFVKGFSRRFWQGSTDHRGVPGKPGRVVTLIEDPEGCVWGVAYKLPSGQEQEVKEYLDYREKGGYGVITVTFHPKDEQQQPMQDTLLYIGSCDNPNYLGPAPLETIAQQIVKSVGPSGKNTDYLFELADALRQLVPEDLDDHLFSLERLVKQLQEQEDMD", "length": 182 }, "evidence": [ { "id": "A0A4X1W6T0", "url": "https://omabrowser.org/oma/group/A0A4X1W6T0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q641Z5-1", "protein_name": "Putative glutathione-specific gamma-glutamylcyclotransferase 2", "gene_name": "Chac2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPGGSVWGVAYKLPVGKEEEVKTYLDFREKGGYRTTTVIFYPKDSTTKPFSVLLYIGTCDNPNYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELADSIRKLVPEDADEHLFSLEKLVKERLEGK", "length": 178 }, "evidence": [ { "id": "A0A4X1W6T0", "url": "https://omabrowser.org/oma/group/A0A4X1W6T0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q84QC1-1", "protein_name": "Gamma-glutamylcyclotransferase 2-3", "gene_name": "GGCT2;3", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAMWVFGYGSLIWKTGFPFDESLPGFIKGYRRVFHQGSTDHRGTPDFPGRTVTLEAAHEEVCCGVAYKITKEEDKRDALLHLEVREKQYDQKEYLDFFTDSNASEPAVAGVMVYIASPDKKSNNNYLGPAPLEDIAKQIVKAKGPSGPNRDYLFNLEEALAQLGFKDKHVTDLANQVRHILSESEELDIDATAATANNV", "length": 199 }, "evidence": [ { "id": "A0A4X1W6T0", "url": "https://omabrowser.org/oma/group/A0A4X1W6T0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8WUX2-1", "protein_name": "Glutathione-specific gamma-glutamylcyclotransferase 2", "gene_name": "CHAC2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MWVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPAGCVWGVAYRLPVGKEEEVKAYLDFREKGGYRTTTVIFYPKDPTTKPFSVLLYIGTCDNPDYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELANSIRNLVPEEADEHLFALEKLVKERLEGKQNLNCI", "length": 184 }, "evidence": [ { "id": "A0A4X1W6T0", "url": "https://omabrowser.org/oma/group/A0A4X1W6T0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9CQG1-1", "protein_name": "Putative glutathione-specific gamma-glutamylcyclotransferase 2", "gene_name": "Chac2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPGGSVWGVAYKLPVGKEEEVKTYLDFREKGGYRTTTVIFYPKDSTTKPFSVLLYIGTCDNPNYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELADSVRKLVPEDADEHLFSLEKLVKERLEGK", "length": 178 }, "evidence": [ { "id": "A0A4X1W6T0", "url": "https://omabrowser.org/oma/group/A0A4X1W6T0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "gamma-glutamylcyclotransferase activity", "id": "GO:0003839", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003839", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W6T0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W6T0" } ], "pmid": "" }, { "name": "glutathione specific gamma-glutamylcyclotransferase activity", "id": "GO:0061928", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061928", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W6T0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W6T0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "glutathione catabolic process", "id": "GO:0006751", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006751", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W6T0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W6T0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W6T0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W6T0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 168, "end_pos": 170, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "47724", "name": "", "equation": "glutathione = L-cysteinylglycine + 5-oxo-L-proline", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "47724", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/47724" } ] }, { "id": "R-SSC-6785928", "name": "CHAC1,2 cleaves GSH to OPRO and CysGly", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6785928", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6785928" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 168, "end_pos": 170 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"database": "Ensembl Gene", "id": "ENSSSCG00000012643", "url": "https://www.ensembl.org/id/ENSSSCG00000012643" } ] } } ], "crossref": [ { "id": "A0A4X1W811", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1W811", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd10400", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd10400", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000980", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000980", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017289", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017289", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035876", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035876", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036860", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036860", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "YSPGRNE", "url": "https://omabrowser.org/oma/group/YSPGRNE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR46051", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46051", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46051:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46051:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00017", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00017", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A4X1W811", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W811", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W811-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W811-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1VSK3", "url": "https://www.uniprot.org/uniprotkb/A0A8D1VSK3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1VSK3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1VSK3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDAVTVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYQGYIYTYRVSQTETGSWSAETAPGVHKRFFRKIKNLISAFQKPDQGIVIPLQYPVEKKSSARSTQGATGRREDPDVFLKTP", "length": 128, "header": "tr|A0A4X1W811-1|A0A4X1W811_PIG Isoform 1 of SH2 domain-containing protein 1A OS=Sus scrofa OX=9823 GN=SH2D1A PE=4 SV=1 CANONICAL=A0A4X1W811-1" }, "isoforms": [ { "isoform_ac": "A0A4X1W811-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W811/entry", "sequence": { "sequence": "MDAVTVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYQGYIYTYRVSQTETGSWSAETAPGVHKRFFRKIKNLISAFQKPDQGIVIPLQYPVEKKSSARSTQGATGRREDPDVFLKTP", "length": 128, "header": "tr|A0A4X1W811-1|A0A4X1W811_PIG Isoform 1 of SH2 domain-containing protein 1A OS=Sus scrofa OX=9823 GN=SH2D1A PE=4 SV=1 CANONICAL=A0A4X1W811-1" }, "locus": { "chromosome": "X", "start_pos": 101847262, "end_pos": 101824602, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000013824.6", "url": "https://www.ensembl.org/id/ENSSSCT00000013824.6" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000013442.2", "url": "https://www.ensembl.org/id/ENSSSCP00000013442.2" } ] } }, { "isoform_ac": "A0A8D1VSK3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1VSK3/entry", "sequence": { "sequence": "MDAVTVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYQGYIYTYRVSQTETGSWSAETAPGVHKRFFRKIKNLISAFQKPDQGIVIPLQYPVEKKSSARSTQGATGMLGPLDPDF", "length": 125, "header": "tr|A0A8D1VSK3-1|A0A4X1W811_PIG Computationally mapped isoform of SH2 domain-containing protein 1A OS=Sus scrofa OX=9823 GN=SH2D1A PE=4 SV=1 CANONICAL=A0A4X1W811-1" }, "locus": { "chromosome": "X", "start_pos": 101846119, "end_pos": 101824602, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072018.1", "url": "https://www.ensembl.org/id/ENSSSCT00000072018.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070869.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070869.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D1VSK3", "url": "https://www.uniprot.org/uniprotkb/A0A8D1VSK3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2LVA5-1", "protein_name": "SH2 domain-containing protein 1A", "gene_name": "Sh2d1a", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDAVTVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYQGYIYTYRVSQTETGSWSAETAPGVHKRFFRKIKNLISAFQKPDQGIVIPLQYPVEKSSARSTQGTTGRSDSDVCLKAP", "length": 126 }, "evidence": [ { "id": "A0A4X1W811", "url": "https://omabrowser.org/oma/group/A0A4X1W811/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "E1BV81-1", "protein_name": "SH2 domain containing 1A", "gene_name": "SH2D1A", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEALPIYHGGITREAGEKLLLAAGADGSYLLRDSESIPGVYCLCVLHQGYVYTYRVSKTESGSWSAETAPGVHRRLFRKMHNLISAFQKPDQGIVTPLKHPVINCAKAKYSPGRSDGRDYLQPS", "length": 124 }, "evidence": [ { "id": 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"", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521269", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D3ZLM7-1", "protein_name": "Zinc finger CCCH domain-containing protein 10", "gene_name": "Zc3h10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPDRDSYANGTGSSGAGPGGGSSEEASGAGTGSGGATSDAICRDFLRNVCKRGKRCRYRHPDMSEVSNLGVSKNEFIFCHDFQNKECSRPNCRFIHGSKEDEDGYKKTGELPPRLRQKVAAGLGLSPADLPNGKEEVPICRDFLKGDCQRGTKCKFRHLQRDFEFEARGGGGTGGGGSTGSAPPGRRHDLYDIYDLPERGFEDHEPGPKRRRGGCCPPDGPHFESYECNLAPLRGVECRLLEEENALLRKRVEELKKQVSNLLATNEVLLEQNAQFRNQAKVMTLSSTAPATEQTLAPTVGTVATFNHGIAQTHTTLSSQALQPRPVSQQELVAPAGAPAAPPTNAAPPAAPPPPPPHLNPEITPLSAALAQTIAQGMAPPPVSMAPVAVSVAPVAPVAVSMAQPLAGITMSHTTTPMVTYPIASQSMRITAMPH", "length": 435 }, "evidence": [ { "id": "A0A4X1W9C6", "url": "https://omabrowser.org/oma/group/A0A4X1W9C6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3HRJ9-1", "protein_name": "Zinc finger 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Classification" ] }, { "id": "IPR000725", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000725", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100524142", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524142", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1W9N3", "url": "https://www.orthodb.org/?gene=A0A4X1W9N3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR48018", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48018", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13853", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13853", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003126261", "url": 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"MASAELDYSIEIPDQPCWSQKNRQGGKEAGKQQPVVILLGWGGCRDKNLAKYSAIYHKRGCIVIRYTAPWHMVFFSESLGIPSLRVIAQKLLELLFDYEIEREPLLFHVFSNAGVMLYRYVLELLQTHQRFRHLHVVGTIFDSGPGDSNLIGALRALATILERRPAVLRLLLLAAFALVVILFHFLLAPFTALFHTHFYDRLQDSGSCWPELYLYSRADKVVSARDVERMVEARLAHQVMVRGVDFVSSAHVSHLRDYPTYYTSLCVDFMHNCVQC", "length": 276 }, "evidence": [ { "id": "A0A4X1W9T2", "url": "https://omabrowser.org/oma/group/A0A4X1W9T2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "regulation of nucleocytoplasmic transport", "id": "GO:0046822", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046822", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W9T2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W9T2" } ], "pmid": "" }, { "name": "negative regulation of BMP signaling pathway", "id": "GO:0030514", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030514", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W9T2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W9T2" } ], "pmid": "" }, { "name": "negative regulation of osteoblast differentiation", "id": "GO:0045668", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045668", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W9T2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W9T2" } ], "pmid": "" }, { "name": "negative regulation of ossification", "id": "GO:0030279", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030279", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W9T2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W9T2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nuclear outer membrane", "id": "GO:0005640", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005640", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W9T2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W9T2" } ], "pmid": "" }, { "name": "nuclear membrane", "id": "GO:0031965", "url": 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"function": [ { "annotation": "Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WA78", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WA78#function" }, { "database": "UniProtKB", "id": "ARBA00003263", "url": "https://www.uniprot.org/uniprotkb/ARBA00003263#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WA78", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WA78" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "HOXC8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WA78", "locus": { "chromosome": "5", "start_pos": 19225835, "end_pos": 19222057, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000038644", "url": "https://www.ensembl.org/id/ENSSSCG00000038644" } ] } } ], "crossref": [ { "id": "A0A4X1WA78", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1WA78", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd00086", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00086", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100739594", "url": "https://www.ncbi.nlm.nih.gov/gene/100739594", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001356", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001356", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001827", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001827", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009057", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009057", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017970", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017970", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020479", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020479", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050948", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050948", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100739594", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100739594", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PSIMFPW", "url": "https://omabrowser.org/oma/group/PSIMFPW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1WA78", "url": "https://www.orthodb.org/?gene=A0A4X1WA78", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46166", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46166", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46166:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46166:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00046", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00046", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-9762293", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9762293", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020947391", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020947391", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1WA78", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WA78", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1WA78-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WA78-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSYFVNPLFSKYKGGESLEPAYYDCRFPQSVGRSHALVYGPGGSAPGFQHASHHVQDFFHHGTSGISNSGYQQNPCSLSCHGDASKFYGYEALPRQSLYGAQQEASVVQYPDCKSSANTNSSEGQGHLNQNSSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGARDEEKVEEEGNEEEEKEEEEKEENKD", "length": 242, "header": "tr|A0A4X1WA78-1|A0A4X1WA78_PIG Isoform 1 of Homeobox C8 OS=Sus scrofa OX=9823 GN=HOXC8 PE=3 SV=1 CANONICAL=A0A4X1WA78-1" }, "isoforms": [ { "isoform_ac": "A0A4X1WA78-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WA78/entry", "sequence": { "sequence": "MSSYFVNPLFSKYKGGESLEPAYYDCRFPQSVGRSHALVYGPGGSAPGFQHASHHVQDFFHHGTSGISNSGYQQNPCSLSCHGDASKFYGYEALPRQSLYGAQQEASVVQYPDCKSSANTNSSEGQGHLNQNSSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGARDEEKVEEEGNEEEEKEEEEKEENKD", "length": 242, "header": "tr|A0A4X1WA78-1|A0A4X1WA78_PIG Isoform 1 of Homeobox C8 OS=Sus scrofa OX=9823 GN=HOXC8 PE=3 SV=1 CANONICAL=A0A4X1WA78-1" }, "locus": { "chromosome": "5", "start_pos": 19224393, "end_pos": 19222256, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061015.3", "url": "https://www.ensembl.org/id/ENSSSCT00000061015.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034272.1", "url": "https://www.ensembl.org/id/ENSSSCP00000034272.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WA78", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WA78" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100739594", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100739594", "resource": "KEGG Pathway" }, { "id": "R-SSC-9762293", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9762293", "resource": "Reactome", "description": "Regulation of CDH11 gene transcription" } ], "orthologs": [ { "uniprot_canonical_ac": "E1BI54-1", "protein_name": "Homeobox C8", "gene_name": "HOXC8", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSSYFVNPLFSKYKGGESLEPAYYDCRFPQSVGRSHALVYGPGGSAPGFQHASHHVQDFFHHGTSGISNSGYQQNPCSLSCHGDASKFYGYEALPRQSLYGAQQEASVVQYPDCKSSANTNSSEGQGHLNQNSSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGARDEEKVEEEGNEEEEKEEEEKEENKD", "length": 242 }, "evidence": [ { "id": "A0A4X1WA78", "url": "https://omabrowser.org/oma/group/A0A4X1WA78/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P09025-1", "protein_name": "Homeobox protein Hox-C8", "gene_name": "Hoxc8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSYFVNPLFSKYKGGESLEPAYYDCRFPQSVGRSHALVYGPGGSAPGFQHASHHVQDFFHHGTSGISNSGYQQNPCSLSCHGDASKFYGYEALPRQSLYGAQQEASVVQYPDCKSSANTNSSEGQGHLNQNSSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGARDEEKVEEEGNEEEEKEEEEKEENKD", "length": 242 }, "evidence": [ { "id": "A0A4X1WA78", "url": "https://omabrowser.org/oma/group/A0A4X1WA78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P18866-1", "protein_name": "Homeobox protein Hox-C8", "gene_name": "Hoxc8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RHNQTGVLFCSAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGARDEEKVEEEGNEEEEKEEEEKEENKD", "length": 108 }, "evidence": [ { "id": "A0A4X1WA78", "url": "https://omabrowser.org/oma/group/A0A4X1WA78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P31273-1", "protein_name": "Homeobox protein Hox-C8", "gene_name": "HOXC8", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSSYFVNPLFSKYKAGESLEPAYYDCRFPQSVGRSHALVYGPGGSAPGFQHASHHVQDFFHHGTSGISNSGYQQNPCSLSCHGDASKFYGYEALPRQSLYGAQQEASVVQYPDCKSSANTNSSEGQGHLNQNSSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGARDEEKVEEEGNEEEEKEEEEKEENKD", "length": 242 }, "evidence": [ { "id": "A0A4X1WA78", "url": 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"categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003356504", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003356504", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1WAX2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WAX2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1WAX2-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WAX2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDKFVIRTPRIQSSPQKKDPGGKIYKQATIESLKRVVVIEDIKRWKTMLELPDQTKENLVEVLRELKKKIPSREVLKSTRIGHTVNKMRQHSDSEVACLAREVYTEWRTFIEEHVDRPSIVVRSDPKTETLRKNAQKLLSEALELEMDHLLVENIERETFHLCSRLINGPYRRTVRALVFTLKHQAEIRAQVKNGTLPVGTFVQTHKK", "length": 208, "header": "tr|A0A4X1WAX2-1|A0A4X1WAX2_PIG Isoform 1 of Transcription elongation factor A N-terminal and central domain containing 2 OS=Sus scrofa OX=9823 GN=TCEANC2 PE=4 SV=1 CANONICAL=A0A4X1WAX2-1" }, "isoforms": [ { "isoform_ac": "A0A4X1WAX2-1", "url": 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"Protein Classification" ] }, { "id": "PTHR11178:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11178:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01106", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01106", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08712", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08712", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-9857492", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9857492", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020943071", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020943071", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1WB62", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WB62", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1WB62-1", "url": 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"MAVAPRLGWGAAAAAAGLRRRLCQMMNPYTIKKQPLHQFVQRQLFPLPATLYNPVRYMFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFCSPLARQLFRIEGVKSVFFGPDFITVTKESEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAGSEDDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYIPEVEGVEQVMDDESDEKEANSP", "length": 253, "header": "tr|A0A4X1WB62-1|A0A4X1WB62_PIG Isoform 1 of NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Sus scrofa OX=9823 GN=NFU1 PE=1 SV=1 CANONICAL=A0A4X1WB62-1" }, "locus": { "chromosome": "3", "start_pos": 73013098, "end_pos": 72983168, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074532.2", "url": "https://www.ensembl.org/id/ENSSSCT00000074532.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070176.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070176.1" } ] } }, { "isoform_ac": "I3LRW0-1", "url": "https://www.uniprot.org/uniprotkb/I3LRW0/entry", "sequence": { "sequence": "MWLGSRVAVAWCRPAAIAPIRPLMMNPYTIKKQPLHQFVQRQLFPLPATLYNPVRYMFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFCSPLARQLFRIEGVKSVFFGPDFITVTKESEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAGSEDDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYIPEVEGVEQVYQYHMTL", "length": 246, "header": "tr|I3LRW0-1|A0A4X1WB62_PIG Computationally mapped isoform of NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Sus scrofa OX=9823 GN=NFU1 PE=1 SV=3 CANONICAL=A0A4X1WB62-1" }, "locus": { "chromosome": "3", "start_pos": 73010464, "end_pos": 72985690, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027178.3", "url": "https://www.ensembl.org/id/ENSSSCT00000027178.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000026851.3", "url": "https://www.ensembl.org/id/ENSSSCP00000026851.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 89, "start_aa": "Thr", "end_pos": 89, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr89", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LRW0", "url": "https://www.uniprot.org/uniprotkb/I3LRW0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:102165918", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102165918", "resource": "KEGG Pathway" }, { "id": "R-SSC-9857492", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9857492", "resource": "Reactome", "description": "Protein lipoylation" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7GHK9-1", "protein_name": "NFU1 iron-sulfur cluster scaffold homolog, mitochondrial", "gene_name": "Nfu1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAAAERAWGAAAGVARLCRRFCHVTPYTFKKQPLHQYVRRPPFLMCAPLFNPVRFMFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPPGEAGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPEVEGVEQVMDDESDEKEADSP", "length": 251 }, "evidence": [ { "id": "A0A4X1WB62", "url": "https://omabrowser.org/oma/group/A0A4X1WB62/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AC58G6J7-1", "protein_name": "NFU1 iron-sulfur cluster scaffold homolog, mitochondrial", "gene_name": "nfu1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPIQDVTSRSLGALTSMAAYRSVGFGRNLAAVLKRTYHGSGLIRPPVYTMGRSPVPQQTTTVFIRNMFIQTQDTPNPNSLKFLPGRAVLDSGTMDFAGPRDAFCSPLARQLFRIDGVKSVFFGPDFITITKTSGETEWKVIKPDVFATIMDFFTSGLPVINEADAPRADTAPSEDDDEVVAMIKELLDTRIRPTVQEDGGDVLYHGFEDGIVKLKLQGSCTSCPSSIITLKNGIQNMLQFYVPEVEGVEQVKEEDVEVA", "length": 259 }, "evidence": [ { "id": "A0A4X1WB62", "url": "https://omabrowser.org/oma/group/A0A4X1WB62/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "D3ZA85-1", "protein_name": "NFU1 iron-sulfur cluster scaffold homolog, mitochondrial", "gene_name": "Nfu1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAAERAWGAAVGVARLCRRLCHVATPHAFKKQPLHQYVQRPLFPLRTPLYNTVRFMFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPPGEAGSSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPEVEGVEQVMDDEESDEKEANSP", "length": 254 }, "evidence": [ { "id": "A0A4X1WB62", "url": "https://omabrowser.org/oma/group/A0A4X1WB62/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P32860-1", "protein_name": "NifU-like protein, mitochondrial", "gene_name": "NFU1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": 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"database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QAH3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAH3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNSYFTNPSLSCHLAGGQDVLPNVALNSTAYDPVRHFSTYGAAVAQNRIYSTPFYSPQENVVFSSSRGPYDYGSNSFYQEKDMLSNCRQNTLGHNTQTSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESNLTSTLSGGGGGAAADSLGGKEEKREETEEEKQKE", "length": 235, "header": "tr|A0A4X1WBT9-1|A0A4X1WBT9_PIG Isoform 1 of Homeobox C6 OS=Sus scrofa OX=9823 GN=HOXC6 PE=3 SV=1 CANONICAL=A0A4X1WBT9-1" }, "isoforms": [ { "isoform_ac": "A0A4X1WBT9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WBT9/entry", "sequence": { "sequence": "MNSYFTNPSLSCHLAGGQDVLPNVALNSTAYDPVRHFSTYGAAVAQNRIYSTPFYSPQENVVFSSSRGPYDYGSNSFYQEKDMLSNCRQNTLGHNTQTSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESNLTSTLSGGGGGAAADSLGGKEEKREETEEEKQKE", "length": 235, "header": "tr|A0A4X1WBT9-1|A0A4X1WBT9_PIG Isoform 1 of Homeobox C6 OS=Sus scrofa OX=9823 GN=HOXC6 PE=3 SV=1 CANONICAL=A0A4X1WBT9-1" }, "locus": { "chromosome": "5", "start_pos": 19242648, "end_pos": 19241217, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091976.1", "url": "https://www.ensembl.org/id/ENSSSCT00000091976.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077345.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077345.1" } ] } }, { "isoform_ac": "A0A5G2QAH3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAH3/entry", "sequence": { "sequence": "MLSNCRQNTLGHNTQTSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESNLTSTLSGGGGGAAADSLGGKEEKREETEEEKQKE", "length": 153, "header": "tr|A0A5G2QAH3-1|A0A5G2QAH3_PIG Computationally mapped isoform of Homeobox C6 OS=Sus scrofa OX=9823 GN=HOXC6 PE=3 SV=1 CANONICAL=A0A4X1WBT9-1" }, "locus": { "chromosome": "5", "start_pos": 19242648, 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A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WBT9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WBT9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100627932", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627932", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7F6T4-1", "protein_name": "Homeobox protein Hox-C6 isoform X3", "gene_name": "Hoxc6", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MNSYFTNPSLSCHLAGGQDVLPNVALNSTAYDPVRHFSTYGAAVAQNRIYSTPFYSPQENVVFSSSRGPYDYGSNSFYQEKDMLSNCRQNTLGHNTQTSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHSVCFVPGSLGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESNLTSTLSGGGGGAAADSLGGKEEKREDTEEEKQKE", "length": 243 }, "evidence": [ { "id": "A0A4X1WBT9", "url": "https://omabrowser.org/oma/group/A0A4X1WBT9/", 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"https://www.ensembl.org/id/ENSSSCG00000003905" } ] } } ], "crossref": [ { "id": "A0A4X1WBU3", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1WBU3", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd18067", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18067", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd18793", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18793", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000330", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000330", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001650", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001650", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014001", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014001", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038718", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038718", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049730", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049730", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050496", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050496", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "YTEHERM", "url": "https://omabrowser.org/oma/group/YTEHERM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR45629", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45629", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45629:SF7", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45629:SF7", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00176", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00176", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00271", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00271", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "13065", "url": "https://www.rhea-db.org/rhea/13065", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1WBU3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WBU3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1WBU3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WBU3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRRSLAPSQLAKRKPEVRPSDGEDWQPGAATPKKRKASNETQSQECFLSPFRKPLIQLTNQPPCLDSSQHEAFIRSILSKPFKIPIPNYQGPLGSRALGLKRAGVRRALHDPLEEGALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPVLSKVLRPHQREGVRFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGLLGTAHEFKKRFELPILKGRDAAASEEDRRLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELREGKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDGFAGALDFFPPGYSSKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGELKELFTLDEASLSDTHDRLRCRRCVNNQQVWPPPDGSDCTSDLAQWNHSTDKRGLADEVLQAAWHAASTAITFVFHQRSHEEQRGLR", "length": 747, "header": "tr|A0A4X1WBU3-1|A0A4X1WBU3_PIG Isoform 1 of DNA repair and recombination protein RAD54-like OS=Sus scrofa OX=9823 GN=RAD54L PE=3 SV=1 CANONICAL=A0A4X1WBU3-1" }, "isoforms": [ { "isoform_ac": "A0A4X1WBU3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WBU3/entry", "sequence": { "sequence": "MRRSLAPSQLAKRKPEVRPSDGEDWQPGAATPKKRKASNETQSQECFLSPFRKPLIQLTNQPPCLDSSQHEAFIRSILSKPFKIPIPNYQGPLGSRALGLKRAGVRRALHDPLEEGALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPVLSKVLRPHQREGVRFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGLLGTAHEFKKRFELPILKGRDAAASEEDRRLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELREGKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDGFAGALDFFPPGYSSKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGELKELFTLDEASLSDTHDRLRCRRCVNNQQVWPPPDGSDCTSDLAQWNHSTDKRGLADEVLQAAWHAASTAITFVFHQRSHEEQRGLR", "length": 747, "header": "tr|A0A4X1WBU3-1|A0A4X1WBU3_PIG Isoform 1 of DNA repair and recombination protein RAD54-like OS=Sus scrofa OX=9823 GN=RAD54L PE=3 SV=1 CANONICAL=A0A4X1WBU3-1" }, "locus": { "chromosome": "6", "start_pos": 165184194, "end_pos": 165157035, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059309.2", "url": "https://www.ensembl.org/id/ENSSSCT00000059309.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034469.1", "url": "https://www.ensembl.org/id/ENSSSCP00000034469.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WBU3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WBU3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2QIA9-1", "protein_name": "DNA repair and recombination protein RAD54-like", "gene_name": "Rad54l", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MRRSLAPSQLARRKPEGRSSDDEDWQPGTVTPKKQKSSNETQCFLSPFRKPLTQLINRPPCLDSSQHEAFIRSILSKPFKVPIPNYQGPLGCRALGLKKAGIRRALHDPLEEGALVLYEPPPLSVHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDRKLEGFMNQRGARVPSPILIISYETFRLHVGVLKKGNVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFELPILRSRDAAASEADRQLGEERLRELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPEEELREGKMSVSSLSSITSLKKLCNHPALIYDKCVSGEDGFEDTLDIFPPGYTSKAVEPQLSGKMLVLDYILAMTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGELKELFTLDEASLSDTHDRLHCRRCVNRRQVWPPPDGSDCTSDLAQWNHSTDKRGLQDEVLQAAWDASPTAITFVFHHRSHEEQRGLH", "length": 744 }, "evidence": [ { "id": "A0A4X1WBU3", "url": "https://omabrowser.org/oma/group/A0A4X1WBU3/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "F1Q8K0-1", "protein_name": "DNA repair and recombination protein RAD54-like", "gene_name": "rad54l", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRRSLAPSQVAKRKQGPDSDDEEDWEPDMEPQCKRDCREKYISPYRKPLTPLTNRPFCADGNEHEAFIRKILSKPFKIPIPNYTGVLGLRALGLRRAGVRKALHDPFEDGALVLYEPPVISAHDLIKADKEKLPVHVVVDPVLSKVLRPHQREGVKFLWDCVTGRRIENSYGCIMADEMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVVSPSSLVRNWYNEVGKWLGGRVQPVAIDGGSKDEIDSKLVNFISQQGMRIPTPILIISYETFRLHAEVLHKGKVGLVICDEGHRLKNSDNQTYLALNSMNAQRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKRFEIPILKGRDADASDKDRAAGEQKLQELISIVNRCLIRRTSDILSKYLPVKIEQVVCCNLTPLQKELYKLFLKQAKPVESLQTGKISVSSLSSITSLKKLCNHPALIYEKCLTGEEGFDGALDLFPQNYSTKAVEPQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKIVERFNNPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELRELFSLNEKTLSDTHDRFRCRRCVNGRQVRPPPDDSDCTCDLSNWHHCADKRGLRDPVLQASWDAAVSFVFHQRSHEDQRGVV", "length": 738 }, "evidence": [ { "id": "A0A4X1WBU3", "url": "https://omabrowser.org/oma/group/A0A4X1WBU3/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F7EM66-1", "protein_name": "DNA repair and recombination protein RAD54-like", "gene_name": "Rad54l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRRSLAPSQLARRKPEDISSDDEDWQPETVTPKKRKSTAETQAQQCFLSPFRKPLTQLLNRPPCLDSSQHEAFIRSILSKPFKVPIPNYQGPLGSRALGLKRAGVRRALHDPLEEGALVLYEPPPLSVHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLGGRIQPLAIDGGSKDEIDRKLEGFMNQRGARVPSPILIISYETFRLHVEVLKKGNVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKSRDAAASEADRQLGEERLRELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPEEELHEGKMSVSSLSSITSLKKLCNHPALIYDKCVAEEDGFEGTLGIFPPGYNSKAVEPQLSGKMLVLDYILAMTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKICYIYRLLSMLLAVFFGCLAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGELKELFTLDEASLSDTHDRLHCRRCVNNRQVWPPPDGSDCTSDLAQWNHNTDKRGLQDEVLQAAWDASSTAITFVFHQRSHEEQRGLHC", "length": 758 }, "evidence": [ { "id": "A0A4X1WBU3", "url": "https://omabrowser.org/oma/group/A0A4X1WBU3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "O76460-1", "protein_name": "DNA repair and recombination protein RAD54-like", "gene_name": "okr", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MRRSLAPSQRGPLRPESRHSFTPPLLKKNKRSCQQELEREQELDRRRLGALRDASNTSELPLPIRFTANSEYELAIAKVLARKFKVPMDNYVPDYGGKRVLGVRRCISRRPLHDPMACNALVLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMTSARLGTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADCNEKASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVLPSNYKPKDLNPELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTFDANILSDTHDKLKCKRCVQNIQMKPPPEDTDCTSHLSQWYHCSNNRGLPDNILAQAWMDCKCVSFVFHHRSQAQEIVPSAEEEATDQPEEKPESRKRSSTPASDDSADEDFRGF", "length": 784 }, "evidence": [ { "id": "A0A4X1WBU3", "url": "https://omabrowser.org/oma/group/A0A4X1WBU3/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "P32863-1", "protein_name": "DNA repair and recombination protein RAD54", "gene_name": "RAD54", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MARRRLPDRPPNGIGAGERPRLVPRPINVQDSVNRLTKPFRVPYKNTHIPPAAGRIATGSDNIVGGRSLRKRSATVCYSGLDINADEAEYNSQDISFSQLTKRRKDALSAQRLAKDPTRLSHIQYTLRRSFTVPIKGYVQRHSLPLTLGMKKKITPEPRPLHDPTDEFAIVLYDPSVDGEMIVHDTSMDNKEEESKKMIKSTQEKDNINKEKNSQEERPTQRIGRHPALMTNGVRNKPLRELLGDSENSAENKKKFASVPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDYLEAEAFNTSSEDPLKSDEKALTESQKTEQNNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLRRNVDQLKNCNVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALLSFSNPGLLGSRAEFRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRTNDILAKYLPCKYEHVIFVNLKPLQNELYNKLIKSREVKKVVKGVGGSQPLRAIGILKKLCNHPNLLNFEDEFDDEDDLELPDDYNMPGSKARDVQTKYSAKFSILERFLHKIKTESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDAKEDVERLFSSDNLRQLFQKNENTICETHETYHCKRCNAQGKQLKRAPAMLYGDATTWNHLNHDALEKTNDHLLKNEHHYNDISFAFQYISH", "length": 898 }, "evidence": [ { "id": "A0A4X1WBU3", "url": "https://omabrowser.org/oma/group/A0A4X1WBU3/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P70270-1", "protein_name": "DNA repair and recombination protein RAD54-like", "gene_name": "Rad54l", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRRSLAPSQLARRKPEDRSSDDEDWQPGTVTPKKRKSSSETQVQECFLSPFRKPLTQLLNRPPCLDSSQHEAFIRSILSKPFKVPIPNYQGPLGSRALGLKRAGVRRALHDPLEEGALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLGGRIQPLAIDGGSKDEIDRKLEGFMNQRGARVPSPILIISYETFRLHVGVLKKGNVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKSRDAAASEADRQRGEERLRELIGIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPEEELREGKMSVSSLSSITSLKKLCNHPALIYDKCVAEEDGFEGTLGIFPPGYNSKAVEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRVRRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGELKELFTLDEASLSDTHDRLHCRRCVNNRQVWPPPDGSDCTSDLAQWNHSTDKRGLQDEVLQAAWDASSTAITFVFHQRSHEEQRGLH", "length": 747 }, "evidence": [ { "id": "A0A4X1WBU3", "url": "https://omabrowser.org/oma/group/A0A4X1WBU3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q92698-1", "protein_name": "DNA repair and recombination protein RAD54-like", "gene_name": "RAD54L", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRRSLAPSQLAKRKPEGRSCDDEDWQPGLVTPRKRKSSSETQIQECFLSPFRKPLSQLTNQPPCLDSSQHEAFIRSILSKPFKVPIPNYQGPLGSRALGLKRAGVRRALHDPLEKDALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELLEGKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDGFVGALDLFPPGYSSKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGELKELFILDEASLSDTHDRLHCRRCVNSRQIRPPPDGSDCTSDLAGWNHCTDKWGLRDEVLQAAWDAASTAITFVFHQRSHEEQRGLR", "length": 747 }, "evidence": [ { "id": "A0A4X1WBU3", "url": "https://omabrowser.org/oma/group/A0A4X1WBU3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WBU3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WBU3" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WBU3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WBU3" } ], "pmid": "" }, { "name": "ATP-dependent DNA/DNA annealing activity", "id": "GO:0036310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036310", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WBU3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WBU3" } ], "pmid": "" }, { "name": "DNA helicase activity", "id": "GO:0003678", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003678", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WBU3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WBU3" } ], "pmid": "" }, { "name": "DNA translocase activity", "id": "GO:0015616", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015616", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WBU3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WBU3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WBU3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WBU3" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WBU3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WBU3" } ], "pmid": "" }, { "name": "site of double-strand break", "id": "GO:0035861", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035861", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WBU3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WBU3" } ], "pmid": "" }, { "name": "protein-containing complex", "id": "GO:0032991", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032991", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WBU3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WBU3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "reciprocal meiotic recombination", "id": "GO:0007131", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007131", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WBU3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WBU3" } ], "pmid": "" }, { "name": "double-strand break repair via synthesis-dependent strand annealing", "id": "GO:0045003", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045003", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WBU3", 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"MPGGKRGLVAPQNTFLENIVRRSSESSFLLGNAQIVDWPVVYSNDGFCKLSGYHRADVMQKSSTCSFMYGELTDKKTIEKVRQTFDNYESNCFEVLLYKKNRTPVWFYMQIAPIRNEHEKVVLFLCTFKDITLFKQPIEDDSTKGWTKFARLTRALTNSRSVLQQLTPMNKTEVVHKHSRLAEVLQLGSDILPQYKQEAPKTPPHIILHYCAFKTTWDWVILILTFYTAIMVPYNVSFKTKQNNIAWLVLDSVVDVIFLVDIVLNFHTTFVGPGGEVISDPKLIRMNYLKTWFVIDLLSCLPYDIINAFENVDEGISSLFSSLKVVRLLRLGRVARKLDHYLEYGAAVLVLLVCVFGLVAHWLACIWYSIGDYEVIDEVTNTIQIDSWLYQLALSIGTPYRYNTSAGIWEGGPSKDSLYVSSLYFTMTSLTTIGFGNIAPTTDVEKMFSVAMMMVGSLLYATIFGNVTTIFQQMYANTNRYHEMLNNVRDFLKLYQVPKGLSERVMDYIVSTWSMSKGIDTEKVLSICPKDMRADICVHLNRKVFNEHPAFRLASDGCLRALAVEFQTIHCAPGDLIYHAGESVDALCFVVSGSLEVIQDDEVVAILGKGDVFGDIFWKETTLAHACANVRALTYCDLHIIKREALLKVLDFYTAFANSFSRNLTLTCNLRKRIIFRKISDVKKEEEERLRQKNEVTLSIPVDHPVRKLFQKFKQQKELRNQGSTQSDPERNQLQVESHSFQNGASITGTSVVTVSQITPIQTSLAYVKTSESLKQNNRDAMERKPSGGADAKCLKVNSPIRMKNGNGKGWLRLKNNMGAHEEKKEDWNNVTKAESMGLLSEDPKGSDSENSVTKNPLRKTDSCDSGITKSDLRLDKAGEARSPLEHSPIQADAKHPFYPIPEQALQTTLQEVKHELKEDIQLLSCRMTALEKQVAEILKILSEKSVPQTSSPKSQMPLQVPPQIPCQDIFSVSRPESPESDKDEIHF", 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L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WCE0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WCE0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100510997", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100510997", "resource": "KEGG Pathway" }, { "id": "R-SSC-1296072", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1296072", "resource": "Reactome", "description": "Voltage gated Potassium channels" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2LMD2-1", "protein_name": "Potassium voltage-gated channel subfamily H member 5", "gene_name": "Kcnh5", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MPGGKRGLVAPQNTFLENIVRRSSESSFLLGNAQIVDWPVVYSNDGFCKLSGYHRADVMQKSSTCSFMYGELTDKKTIEKVRQTFDNYESNCFEVLLYKKNRTPVWFYMQIAPIRNEHEKVVLFLCTFKDITLFKQPIEDDSTKGWTKFARLTRALTNSRSVLQQLTPMNKTETVHKHSRLAEVLQLGSDILPQYKQEAPKTPPHIILHYCAFKTTWDWVILILTFYTAIMVPYNVSFKTKQNNIAWLVLDSVVDVIFLVDIVLNFHTTFVGPGGEVISDPKLIRMNYLKTWFVIDLLSCLPYDIINAFENVDEGISSLFSSLKVVRLLRLGRVARKLDHYLEYGAAVLVLLVCVFGLVAHWLACIWYSIGDYEVIDEVTNTIQIDSWLYQLALSIGTPYRYNTSAGIWEGGPSKDSLYVSSLYFTMTSLTTIGFGNIAPTTDVEKMFSVAMMMVGSLLYATIFGNVTTIFQQMYANTNRYHEMLNNVRDFLKLYQVPKGLSERVMDYIVSTWSMSKGIDTEKVLSICPKDMRADICVHLNRKVFNEHPAFRLASDGCLRALAVEFQTIHCAPGDLIYHAGESVDALCFVVSGSLEVIQDDEVVAILGKGDVFGDIFWKETTLAHACANVRALTYCDLHIIKREALLKVLDFYTAFANSFSRNLTLTCNLRKRIIFRKISDVKKEEEERLRQKNEVTLSIPVDHPVRKLFQKFKQQKELRNQGSAQSDPERSQLQVESRPLQNGASITGTSVVTVSQITPIQTSLAYVKTSESLKQNNRDAMELKPNGGAEQRCLKVNSPIRMKNGNGKGWLRLKNNMGAHEEKKEDWNNVTKAESMGLLSEDPKGSDSENSVTKNPLRKTDSCDSGITKSDLRLDKAGEARSPLEHSPIQADAKHPFYPIPEQALQTTLQEVKHELKEDIQLLSCRMTALEKQVAEILKLLSEKSLPQTPSPKPQMPLQVPPQIPCQDIFSVSRPESPESDKDEINF", "length": 988 }, "evidence": [ { "id": "A0A4X1WDN0", "url": "https://omabrowser.org/oma/group/A0A4X1WDN0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8V0Z394-1", "protein_name": "Potassium voltage-gated channel subfamily H member 5", "gene_name": "KCNH5", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPGGKRGLVAPQNTFLENIVRRSSESSFLLGNAQIVDWPVVYSNDGFCKLSGYHRADVMQKSSTCSFMYGELTDKKTIEKVRQTFDNYESNCFEILLYKKNRTPVWFYMQIAPIRNEHEKVVLFLCTFKDITLFKQPIEDDSTKGWTKFARLTRALTNSRSVLQQLTPMNKAEVVHKHSRLAEVLQLGSDILPQYKQEAPKTPPHIILHYCAFKTTWDWVILILTFYTAIMVPYNVSFKTKQNNIAWLVLDSVVDVIFLVDIVLNFHTTFVGPGGEVISDPKLIRMNYLKTWFVIDLLSCLPYDIINAFENVDEGISSLFSSLKVVRLLRLGRVARKLDHYLEYGAAVLVLLVCVFGLVAHWLACIWYSIGDYEVIDEVTNTIKTDSWLYQLALSIGTPYRYNTTGSGQWEGGPSKDSLYISSLYFTMTSLTTIGFGNIAPTTDGEKIFSVAMMMVGSLLYATIFGNVTTIFQQMYANTNRYHEMLNNVRDFLKLYQVPKGLSERVMDYIVSTWSMSKGIDTEKVLSICPKDMRADICVHLNRKVFNEHPAFRLASDGCLRALAVEFQTIHCAPGDLIYHAGESVDALCFVVSGSLEVIQDDEVVAILGKGDVFGDIFWKETSLAHACANVRALTYCDLHIIKREALLKVLDFYTAFANSFSRNLTLTCNLRKRIIFRKISDVKKEEEERMRQKNEVTLSIPVDHPVRKLFQKFKQQKEMRNQGSTHIDPERNQLQVESRSVQNGASITGTSVVTVSQITPIQTSLAYVKTSEAVKQNNRDAMELKPNGNGDQKCLKVNSPMRMKNGNGKGWLRLKNTMGTHEEKKEDWNNVTKAESMGLLSEDPKCNDSENGVNKNPLRKTDSCDSGITKSDLRLDKAGETRSPLEHSPIQADARHPFYPIPEQALQTTLQEVKHELKEDIQLLSSRMAALEKQVAEILKILSEKNVPQVSSPTSHLSPQRPPQIPCQDIFSVSRPASPESEKDEIHF", "length": 989 }, "evidence": [ { "id": "A0A4X1WDN0", "url": "https://omabrowser.org/oma/group/A0A4X1WDN0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1MP51-1", "protein_name": "Potassium voltage-gated channel subfamily H member 5", "gene_name": "KCNH5", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPGGKRGLVAPQNTFLENIVRRSSESSFLLGNAQIVDWPVVYSNDGFCKLSGYHRADVMQKSSTCSFMYGELTDKKTIEKVRQTFDNYESNCFEVLLYKKNRTPVWFYMQIAPIRNEHEKVVLFLCTFKDITLFKQPIEDDSTKGWTKFARLTRALTNSRSVLQQLTPMNKTEVVHKHSRLAEVLQLGSDILPQYKQEAPKTPPHIILHYCAFKTTWDWVILILTFYTAIMVPYNVSFKTKQNNIAWLVLDSVVDVIFLVDIVLNFHTTFVGPGGEVISDPKLIRMNYLKTWFVIDLLSCLPYDIINAFENVDEGISSLFSSLKVVRLLRLGRVARKLDHYLEYGAAVLVLLVCVFGLVAHWLACIWYSIGDYEVIDEVTNTIQIDSWLYQLALSIGTPYRYNTSAGIWEGGPSKDSLYVSSLYFTMTSLTTIGFGNIAPTTDVEKMFSVAMMMVGSLLYATIFGNVTTIFQQMYANTNRYHEMLNNVRDFLKLYQVPKGLSERVMDYIVSTWSMSKGIDTEKVLSICPKDMRADICVHLNRKVFNEHPAFRLASDGCLRALAVEFQTIHCAPGDLIYHAGESVDALCFVVSGSLEVIQDDEVVAILGKGDVFGDIFWKETTLAHACANVRALTYCDLHIIKREALLKVLDFYTAFANSFSRNLTLTCNLRKRIIFRKISDVKKEEEERLRQKNEVTLSIPVDHPVRKLFQKFKQQKELRNQGSTQSDPERNQLQVESRSLQNGAPITGTSVVTVSQITPIQTSLAYVKTSESLKQNNRDAMELKPSGGADPKCLKVNSPIRMKNGNGKGWLRLKNNMGTHEEKKEDWNNVTKAESMGLLSEDPKGSDSENSVTKNPLRKTDSCDSGITKSDLRLDKAGEARSPLEHSPIQADAKHPFYPIPEQALQTTLQEVKHELKEDIQLLSCRMTALEKQVAEILKILSEKSTPPISSPKSQMPLQVPPQIPCQDIFSVSRPESPESDKDEIHF", "length": 988 }, "evidence": [ { "id": "A0A4X1WDN0", "url": "https://omabrowser.org/oma/group/A0A4X1WDN0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q920E3-1", "protein_name": "Voltage-gated delayed rectifier potassium channel KCNH5", "gene_name": "Kcnh5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPGGKRGLVAPQNTFLENIVRRSSESSFLLGNAQIVDWPVVYSNDGFCKLSGYHRADVMQKSSTCSFMYGELTDKKTIEKVRQTFDNYESNCFEVLLYKKNRTPVWFYMQIAPIRNEHEKVVLFLCTFKDITLFKQPIEDDSTKGWTKFARLTRALTNSRSVLQQLTPMNKTETVHKHSRLAEVLQLGSDILPQYKQEAPKTPPHIILHYCAFKTTWDWVILILTFYTAIMVPYNVSFKTKQNNIAWLVLDSVVDVIFLVDIVLNFHTTFVGPGGEVISDPKLIRMNYLKTWFVIDLLSCLPYDIINAFENVDEGISSLFSSLKVVRLLRLGRVARKLDHYLEYGAAVLVLLVCVFGLVAHWLACIWYSIGDYEVIDEVTNTIQIDSWLYQLALSIGTPYRYNTSAGIWEGGPSKDSLYVSSLYFTMTSLTTIGFGNIAPTTDVEKMFSVAMMMVGSLLYATIFGNVTTIFQQMYANTNRYHEMLNNVRDFLKLYQVPKGLSERVMDYIVSTWSMSKGIDTEKVLSICPKDMRADICVHLNRKVFNEHPAFRLASDGCLRALAVEFQTIHCAPGDLIYHAGESVDALCFVVSGSLEVIQDEEVVAILGKGDVFGDIFWKETTLAHACANVRALTYCDLHIIKREALLKVLDFYTAFANSFSRNLTLTCNLRKRIIFRKISDVKKEEEERLRQKNEVTLSIPVDHPVRKLFQKFKQQKELRIQGSAQSDPERSQLQVESRPLQNGASITGTSVVTVSQITPIQTSLAYVKTSESLKQNNRDAMELKPNGGAEPKCLKVNSPIRMKNGNGKGWLRLKNNMGAQEEKKEDWNNVTKAESMGLLSEDPKGSDSENSVTKNPLRKTDSCDSGITKSDLRLDKAGEARSPLEHSPSQADVKHSFYPIPEQALQTTLQEVKHELKEDIQLLSCRMTALEKQVAEILKLLSEKSVPQTSSPKPQIPLQVPPQIPCQDIFSVSRPESPESDKDEINF", "length": 988 }, "evidence": [ { "id": "A0A4X1WDN0", "url": "https://omabrowser.org/oma/group/A0A4X1WDN0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPI9-1", "protein_name": "Voltage-gated delayed rectifier potassium channel KCNH5", "gene_name": "Kcnh5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPGGKRGLVAPQNTFLENIVRRSSESSFLLGNAQIVDWPVVYSNDGFCKLSGYHRADVMQKSSTCSFMYGELTDKKTIEKVRQTFDNYESNCFEVLLYKKNRTPVWFYMQIAPIRNEHEKVVLFLCTFKDITLFKQPIEDDSTKGWTKFARLTRALTNSRSVLQQLTPMNKTETVHKHSRLAEVLQLGSDILPQYKQEAPKTPPHIILHYCAFKTTWDWVILILTFYTAIMVPYNVSFKTKQNNIAWLVLDSVVDVIFLVDIVLNFHTTFVGPGGEVISDPKLIRMNYLKTWFVIDLLSCLPYDIINAFENVDEGISSLFSSLKVVRLLRLGRVARKLDHYLEYGAAVLVLLVCVFGLVAHWLACIWYSIGDYEVIDEVTNTIQIDSWLYQLALSIGTPYRYNTSAGIWEGGPSKDSLYVSSLYFTMTSLTTIGFGNIAPTTDVEKMFSVAMMMVGSLLYATIFGNVTTIFQQMYANTNRYHEMLNNVRDFLKLYQVPKGLSERVMDYIVSTWSMSKGIDTEKVLSICPKDMRADICVHLNRKVFNEHPAFRLASDGCLRALAVEFQTIHCAPGDLIYHAGESVDALCFVVSGSLEVIQDEEVVAILGKGDVFGDIFWKETTLAHACANVRALTYCDLHIIKREALLKVLDFYTAFANSFSRNLTLTCNLRKRIIFRKISDVKKEEEERLRQKNEVTLSIPVDHPVRKLFQKFKQQKELRNQGSAQSDPERSQLQVESRPLQNGASITGTSVVTVSQITPIQTSLAYVKTSETLKQNNRDAMELKPNGGAEPKCLKVNSPIRMKNGNGKGWLRLKNNMGAHEEKKEEWNNVTKAESMGLLSEDPKGSDSENSVTKNPLRKTDSCDSGITKSDLRLDKAGEARSPLEHSPSQADAKHPFYPIPEQALQTTLQEVKHELKEDIQLLSCRMTALEKQVAEILKLLSEKSVPQTSSPKPQIPLQVPPQIPCQDIFSVSRPESPESDKDEINF", "length": 988 }, "evidence": [ { "id": "A0A4X1WDN0", "url": "https://omabrowser.org/oma/group/A0A4X1WDN0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "calmodulin binding", "id": "GO:0005516", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005516", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WDN0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WDN0" } ], "pmid": "" }, { "name": "voltage-gated potassium channel activity", "id": "GO:0005249", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005249", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WDN0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WDN0" } ], "pmid": "" }, { "name": "delayed rectifier potassium channel activity", "id": "GO:0005251", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005251", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WDN0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WDN0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "monoatomic ion channel complex", "id": "GO:0034702", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034702", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WDN0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WDN0" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WDN0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WDN0" } ], "pmid": "" }, { "name": "cell surface", "id": "GO:0009986", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009986", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WDN0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WDN0" } ], "pmid": "" }, { "name": "voltage-gated potassium channel complex", "id": "GO:0008076", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008076", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WDN0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WDN0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "regulation of membrane potential", "id": "GO:0042391", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042391", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WDN0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WDN0" } ], "pmid": "" }, { "name": "potassium ion transmembrane transport", "id": "GO:0071805", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071805", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WDN0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WDN0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 101, "end_pos": 103, "annotation": "n_glycosylation_sequon" }, { "start_pos": 170, "end_pos": 172, "annotation": "n_glycosylation_sequon" }, { "start_pos": 235, "end_pos": 237, "annotation": "n_glycosylation_sequon" }, { "start_pos": 403, "end_pos": 405, "annotation": "n_glycosylation_sequon" }, { "start_pos": 466, "end_pos": 468, "annotation": "n_glycosylation_sequon" }, { "start_pos": 663, "end_pos": 665, "annotation": "n_glycosylation_sequon" }, { "start_pos": 830, "end_pos": 832, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "29463", "name": "", "equation": "K(+)(in) = K(+)(out)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "29463", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/29463" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A4X1WDN0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WDN0" }, { "id": "PS50042", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50042" } ], "ann_type": 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"end_pos": 103 }, { "start_pos": 170, "end_pos": 172 }, { "start_pos": 235, "end_pos": 237 }, { "start_pos": 403, "end_pos": 405 }, { "start_pos": 466, "end_pos": 468 }, { "start_pos": 663, "end_pos": 665 }, { "start_pos": 830, "end_pos": 832 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { 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"database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1WCE7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WCE7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1WCE7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WCE7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1WDN4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WDN4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1WDN4-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WDN4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"MALQIMPSRDMSSAPTTPPSVDKVDGFSRKSVRKARQKRSQSSSQFRSQGKPIELTPLPLLKDVPSSEQPELFLKKLQQCCVIFDFMDTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYPEVVRMVSCNIFRTLPPSDSSEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKFVLQLLELFDSEDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPSLTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQIAKCVSSPHFQVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALVYNVLKAFMEMNSTMFDELTATYKSDRQREKKKEKEREELWKKLEDLELKRGLRRDGIIPT", "length": 477, "header": "tr|A0A4X1WCE7-1|A0A4X1WDN4_PIG Computationally mapped isoform of Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit OS=Sus scrofa OX=9823 GN=PPP2R5E PE=1 SV=1 CANONICAL=A0A4X1WDN4-1" }, "locus": { "chromosome": "1", "start_pos": 194653149, "end_pos": 194507205, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000057247.3", "url": "https://www.ensembl.org/id/ENSSSCT00000057247.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050867.1", "url": "https://www.ensembl.org/id/ENSSSCP00000050867.1" } ] } }, { "isoform_ac": "A0A4X1WDN4-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WDN4/entry", "sequence": { "sequence": "MSSAPTTPPSVDKVDGFSRKSVRKARQKRSQSSSQFRSQGKPIELTPLPLLKDVPSSEQPELFLKKLQQCCVIFDFMDTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYPEVVRMVSCNIFRTLPPSDSSEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKFVLQLLELFDSEDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPSLTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQIAKCVSSPHFQVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALVYNVLKAFMEMNSTMFDELTATYKSDRQREKKKEKEREELWKKLEDLELKRGLRRDGIIPT", "length": 467, "header": "tr|A0A4X1WDN4-1|A0A4X1WDN4_PIG Isoform 1 of Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit OS=Sus scrofa OX=9823 GN=PPP2R5E PE=1 SV=1 CANONICAL=A0A4X1WDN4-1" }, "locus": { "chromosome": "1", "start_pos": 194653149, "end_pos": 194507721, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032151.3", "url": "https://www.ensembl.org/id/ENSSSCT00000032151.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023113.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023113.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WCE7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WCE7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-141430", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-141430", "resource": "Reactome", "description": "Inactivation of APC/C via direct inhibition of the APC/C complex" }, { "id": "R-SSC-141444", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-141444", "resource": "Reactome", "description": "Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal" }, { "id": "R-SSC-195253", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-195253", "resource": "Reactome", "description": "Degradation of beta-catenin by the destruction complex" }, { "id": "R-SSC-196299", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-196299", "resource": "Reactome", 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"resource": "Reactome", "description": "Mitotic Prometaphase" }, { "id": "R-SSC-9648025", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9648025", "resource": "Reactome", "description": "EML4 and NUDC in mitotic spindle formation" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A6F7R657-1", "protein_name": "Widerborst, isoform H", "gene_name": "wdb", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MISRYRFNTAINITQQQKLIQQLQQQQQQQAIAFREKKQKQKLKLQLQQPLQLQIGQDANGIGGGGEEGVELLGLPKGTENNCKTPNSTAKVANITHKIFGWLRKTRNKRPVEILNSDFGEDGDEGVGEGKGQGAGEGGGAAASAAGGAADQFPVASVKNKAGKLNTTQTATETAIDSNEPKSEKMSSGTFVDRIDPFAKRSLKKKGKKSQGSSRYRNSQDVELQQLPPLKADCSSLEQEELFIRKLRQCCVSFDFMDPVTDLKGKEIKRAALNDLSTYITHGRGVLTEPVYPEIIRMISCNLFRTLPPSENPDFDPEEDDPTLEASWPHLQLVYEVFLRFLESQDFQATIGKRVIDQKFVLQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVGELLEILGSIINGFALPLKAEHKQFLVKVLLPLHKVKCLSLYHAQLAYCIVQFLEKDPFLTEPVVRGLLKFWPKTCSQKEVMFLGEIEEILDVIDPPQFVKIQEPLFRQIAKCVSSPHFQVAERALYLWNNEYAMSLIEENNAVIMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSKLFDELTSSYKAERQKEKKRERDREELWKKLHELESNRSSGRTAGGSATTSNSAASAASTSLQPPSSAGLNSHQQQSNSGSSGSLSSGGAGGDNNPATTNAKIKQDKADN", "length": 709 }, "evidence": [ { "id": "A0A4X1WDN4", "url": "https://omabrowser.org/oma/group/A0A4X1WDN4/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "A0A8I5ZMG6-1", "protein_name": "Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit", "gene_name": "Ppp2r5e", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSAPTTPPSVDKVDGFSRKSVRKARQKRSQSSSQFRSQGKPIELTPLPLLKDVPTSEQPELFLKKLQQCCVIFDFMDTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYPEVVRMVSCNIFRTLPPSDSNEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKFVLQLLELFDSEDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPSLTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQIAKCVSSPHFQVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALVYNVLKAFMEMNSTMFDELTATYKSDRQREKKKEKEREELWKKLEDLELKRGLRRDGIIPT", "length": 467 }, "evidence": [ { "id": "A0A4X1WDN4", "url": "https://omabrowser.org/oma/group/A0A4X1WDN4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A4FV68-1", "protein_name": "Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform", "gene_name": "PPP2R5E", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSSAPTTPPSVDKVDGFSRKSVRKARQKRSQSSSQFRSQGKPIELTPLPLLKDVPSSEQPELFLKKLQQCCVIFDFMDTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYPEVVRMVSCNIFRTLPPSDSNEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKFVLQLLELFDSEDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPSLTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQIAKCVSSPHFQVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALVYNVLKAFMEMNSTMFDELTATYKSDRQREKKKEKEREELWKKLEDLELKRGLRRDGIIPT", "length": 467 }, "evidence": [ { "id": "A0A4X1WDN4", "url": "https://omabrowser.org/oma/group/A0A4X1WDN4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3H4Y5-1", "protein_name": "Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit", "gene_name": "Ppp2r5e", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSSAPTTPPSVDKVDGFSRKSVRKARQKRSQSSSQFRSQGKPIELTPLPLLKDVPTSEQPELFLKKLQQCCVIFDFMDTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYPEVVRMVSCNIFRTLPPSDSNEFDPEEDEPTLEASWPHLQLIYEFFIRFLESQEFQPSIAKKYIDQKFVLQLLELFDSEDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPSLTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQIAKCVSSPHFQVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALVYNVLKAFMEMNSTMFDELTATYKSDRQREKKKEKEREELWKKLEDLELKRGLRRDGIIPT", "length": 467 }, "evidence": [ { "id": "A0A4X1WDN4", "url": "https://omabrowser.org/oma/group/A0A4X1WDN4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q16537-1", "protein_name": "Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform", "gene_name": "PPP2R5E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSSAPTTPPSVDKVDGFSRKSVRKARQKRSQSSSQFRSQGKPIELTPLPLLKDVPSSEQPELFLKKLQQCCVIFDFMDTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYPEVVRMVSCNIFRTLPPSDSNEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKFVLQLLELFDSEDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPSLTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQIAKCVSSPHFQVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALVYNVLKAFMEMNSTMFDELTATYKSDRQREKKKEKEREELWKKLEDLELKRGLRRDGIIPT", "length": 467 }, "evidence": [ { "id": "A0A4X1WDN4", "url": "https://omabrowser.org/oma/group/A0A4X1WDN4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q61151-1", "protein_name": "Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform", "gene_name": "Ppp2r5e", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSAPTTPPSVDKVDGFSRKSVRKARQKRSQSSSQFRSQGKPIELTPLPLLKDVPTSEQPELFLKKLQQCCVIFDFMDTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYPEVVRMVSCNIFRTLPPSDSNEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKFVLQLLELFDSEDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPSLTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQIAKCVSSPHFQVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALVYNVLKAFMEMNSTMFDELTATYKSDRQREKKKEKEREELWKKLEDLELKRGLRRDGIIPT", "length": 467 }, "evidence": [ { "id": "A0A4X1WDN4", "url": "https://omabrowser.org/oma/group/A0A4X1WDN4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q93YV6-1", "protein_name": "Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform", "gene_name": "B'KAPPA", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MFKQFLSKLPRKSSKSDSGELNRSSSGPVSSPVQRSGTSGGGSGPVRSNSGKRMSSAVFPASVVAGIEPLVPFKDVPSSEKLNLFVSKVSLCCVTFDFSDPGKNSIEKDVKRQTLLELLDFVASGSVKFTEPAILAMCRMCAVNLFRVFPPNYRSSSGGENDDDEPMFDPAWPHLQIVYDLLLKFITSPCLDAKVAKKYLDHAFIVRLLDLFDSEDPRERECLKTILHRVYGKFMVHRPFVRKSMSNIFYRFVFETEKHSGIAELLEIFGSIVSGFALPLKEEHKIFLWRVLIPLHKPKSVGNYFQQLSYCITQFIDKEPKLGSVVIKGLLKFWPITNSQKEVMFLGEVEEIVEAMSVMEFQKIMVPLFLRIACCVTSSHFQVSERALFLWNNDQIVNLIGHNRQAILPIMFTALEKNAQNHWNQSVLNLTLNVRKMFCEMDEALFMSCHARFKEDEAKQCSAAEKRKEVWARLENAASMKPITGKTAVLVTPRATSIAC", "length": 500 }, "evidence": [ { "id": "A0A4X1WDN4", "url": "https://omabrowser.org/oma/group/A0A4X1WDN4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WDN4", "url": 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"url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072542", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WDN4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WDN4" } ], "pmid": "" }, { "name": "protein phosphatase regulator activity", "id": "GO:0019888", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019888", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WDN4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WDN4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 418, "end_pos": 420, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 418, "end_pos": 420 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A4X1WCF1-1", "uniprot_ac": "A0A4X1WCF1", "uniprot_id": "A0A4X1WCF1_PIG", "mass": { "chemical_mass": 14302.0, "monoisotopic_mass": 14302.0 }, "refseq": { "ac": "XP_020931067", "name": "glycoprotein hormone beta-5", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931067" }, "gene_names": [ { "name": "GPHB5", "type": "recommended", "evidence": [ { "id": "A0A4X1WCF1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WCF1" } ] }, { "name": "GPHB5", "type": "synonym", "evidence": [ { "id": "XP_020931067", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931067" } ] } ], "protein_names": [ { "name": "Glycoprotein hormone beta-5", "type": "recommended", "evidence": [ { "id": "A0A4X1WCF1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WCF1/entry#names_and_taxonomy" } ] }, { "name": "Thyrostimulin subunit beta", "type": "synonym", "evidence": [ { "id": "A0A4X1WCF1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WCF1/entry#names_and_taxonomy" } ] }, { "name": "glycoprotein hormone beta-5", "type": "synonym", "evidence": [ { "id": "XP_020931067", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931067" } ] } ], "function": [ { "annotation": "Functions as a heterodimeric glycoprotein hormone with GPHA2 able to bind and activate the thyroid-stimulating hormone receptor (TSHR), leading to increased cAMP production. Plays a central role in controlling thyroid cell metabolism.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WCF1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WCF1#function" }, { "database": "UniProtKB", "id": "ARBA00054534", "url": "https://www.uniprot.org/uniprotkb/ARBA00054534#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WCF1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WCF1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GPHB5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WCF1", "locus": { "chromosome": "1", "start_pos": 194743043, "end_pos": 194736877, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005116", "url": "https://www.ensembl.org/id/ENSSSCG00000005116" } ] } } ], "crossref": [ { "id": "A0A4X1WCF1", "url": "https://alphafold.ebi.ac.uk/entry/A0A4X1WCF1", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd00069", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00069", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100526029", "url": "https://www.ncbi.nlm.nih.gov/gene/100526029", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001545", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001545", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006208", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006208", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029034", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029034", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100526029", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100526029", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MAVRCDC", "url": "https://omabrowser.org/oma/group/MAVRCDC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1WCF1", "url": "https://www.orthodb.org/?gene=A0A4X1WCF1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11515", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11515", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11515:SF14", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11515:SF14", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00007", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00007", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-375281", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-375281", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020931067", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931067", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1WCF1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WCF1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1WCF1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WCF1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRLAHLVLGPMILLLLAGCACVLSTSSGNLRTFVGCAVREFTFLAKKPGCRGLRITTDACWGRCETWEKPILEPPYIEAYHRVCTYNETKQVTVKLPNCAPGVDPFYTYPMAVRCDCGACSTATTECETI", "length": 130, "header": "tr|A0A4X1WCF1-1|A0A4X1WCF1_PIG Isoform 1 of Glycoprotein hormone beta-5 OS=Sus scrofa OX=9823 GN=GPHB5 PE=3 SV=1 CANONICAL=A0A4X1WCF1-1" }, "isoforms": [ { "isoform_ac": "A0A4X1WCF1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WCF1/entry", "sequence": { "sequence": "MRLAHLVLGPMILLLLAGCACVLSTSSGNLRTFVGCAVREFTFLAKKPGCRGLRITTDACWGRCETWEKPILEPPYIEAYHRVCTYNETKQVTVKLPNCAPGVDPFYTYPMAVRCDCGACSTATTECETI", "length": 130, "header": "tr|A0A4X1WCF1-1|A0A4X1WCF1_PIG Isoform 1 of Glycoprotein hormone beta-5 OS=Sus scrofa OX=9823 GN=GPHB5 PE=3 SV=1 CANONICAL=A0A4X1WCF1-1" }, "locus": { "chromosome": "1", "start_pos": 194742039, "end_pos": 194737076, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005639.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005639.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005498.4", "url": "https://www.ensembl.org/id/ENSSSCP00000005498.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WCF1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WCF1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100526029", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100526029", "resource": "KEGG Pathway" }, { "id": "R-SSC-375281", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-375281", "resource": "Reactome", "description": "Hormone ligand-binding receptors" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0F7RPV8-1", "protein_name": "Glycoprotein hormone beta-5", "gene_name": "GPHB5", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLVYLFLGPMTLLLLAGCGCVISTSSENLRTFVGCAVREFTFLAKKPGCRGLRITTDACWGRCETWEKPILEPPYIEAHHRVCTYNETKQVTVKLPNCAPGVDPFYSYPVAVRCDCGACSTATTECETI", "length": 130 }, "evidence": [ { "id": "A0A4X1WCF1", "url": "https://omabrowser.org/oma/group/A0A4X1WCF1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8C2MBR3-1", "protein_name": "Glycoprotein hormone beta-5", "gene_name": "Gphb5", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKLAYLVLGAMTLLLLGGYDSVLSTSGRNLHTFVGCAVREFTFLAKKPGCRGLRITTDACWGRCKTWEKPILEPPYIEAHHRVCTYNETKQVTVKLPNCAPGVDPFYTYPMAVRCDCGTCSTATTECETI", "length": 130 }, "evidence": [ { "id": "A0A4X1WCF1", "url": "https://omabrowser.org/oma/group/A0A4X1WCF1/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q812B2-1", "protein_name": "Glycoprotein hormone beta-5", "gene_name": "Gphb5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { 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"MKLPCVTLGALLLLLLAGHGGTETSAIDLRTFIGCAVREFTFLAKKPGCKALRITTDACWGRCETWERPLLHPPYIESYHRVCTYNETKLVTVMLPKCGPGVDPFYTYPVAIRCNCDFCSTATTECETA", "length": 129 }, "evidence": [ { "id": "A0A4X1WCF1", "url": "https://omabrowser.org/oma/group/A0A4X1WCF1/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WCF1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WCF1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "G protein-coupled receptor signaling pathway", "id": "GO:0007186", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007186", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WCF1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WCF1" } ], "pmid": "" }, { "name": 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"https://www.ebi.ac.uk/interpro/entry/IPR047021", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100522657", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522657", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "TDTEQYM", "url": "https://omabrowser.org/oma/group/TDTEQYM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1WCN6", "url": "https://www.orthodb.org/?gene=A0A4X1WCN6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12801", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12801", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12801:SF57", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12801:SF57", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00929", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00929", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003121906", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003121906", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1WCN6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WCN6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1WCN6-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WCN6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVPREAPESTQCLCPSLGSSNAKDVLRRKHKRKSRQHQRFMARKALLQEQGLLSAPPEPGSSPLPMLLDAPPGTEASSSVRQRPKAESGGAPCSRKPTPRESAGPLPSKCVAIDCEMVGTGPRGRVSELARCSVVSYYGDVLYDKYIRPEMPIVDYRTRWSGITRQHMRKAIPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRGQTRDTTYVPNLLSQPGLHTRTRVSLKDLALQLLHKKIQVGQHGHSSVEDAVTAMELYRLVEVQWEQQEASSPRSHPEDREPDSSTDMEQYMEDQYWPEDLAPGTSSGSGEAQGRRE", "length": 325, "header": "tr|A0A4X1WCN6-1|A0A4X1WCN6_PIG Isoform 1 of Apoptosis enhancing nuclease OS=Sus scrofa OX=9823 GN=AEN PE=4 SV=1 CANONICAL=A0A4X1WCN6-1" }, "isoforms": [ { "isoform_ac": "A0A4X1WCN6-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WCN6/entry", "sequence": { "sequence": "MVPREAPESTQCLCPSLGSSNAKDVLRRKHKRKSRQHQRFMARKALLQEQGLLSAPPEPGSSPLPMLLDAPPGTEASSSVRQRPKAESGGAPCSRKPTPRESAGPLPSKCVAIDCEMVGTGPRGRVSELARCSVVSYYGDVLYDKYIRPEMPIVDYRTRWSGITRQHMRKAIPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRGQTRDTTYVPNLLSQPGLHTRTRVSLKDLALQLLHKKIQVGQHGHSSVEDAVTAMELYRLVEVQWEQQEASSPRSHPEDREPDSSTDMEQYMEDQYWPEDLAPGTSSGSGEAQGRRE", "length": 325, "header": "tr|A0A4X1WCN6-1|A0A4X1WCN6_PIG Isoform 1 of Apoptosis enhancing nuclease OS=Sus scrofa OX=9823 GN=AEN PE=4 SV=1 CANONICAL=A0A4X1WCN6-1" }, "locus": { "chromosome": "1", "start_pos": 191207432, "end_pos": 191202279, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005624.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005624.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005483.2", "url": "https://www.ensembl.org/id/ENSSSCP00000005483.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WCN6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WCN6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100522657", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522657", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YMC8-1", "protein_name": "Apoptosis enhancing nuclease", "gene_name": "AEN", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSPGKGQMTPLLLPKASAPTPKRTHGPAGPPSPRMTPQGPGSKKKSRRHQRFMERRALLERRGLLRPRRRLGTQGPPGGLSSVTPRGWKVSKLGLSVSPSASPNGIVGRCCGTSVGNAVTGVQLCPPRPNKYVAIDCEMVGTGPRGRQSELARCSIVSYDGDVIYDKYVLPLLPVVDFRTRWSGITKRHMESAIPFRAAQEEILKILKDRIVVGHAIHNDFQALKYFHPKEKTRDTSRIPLLNQRAGLPPGANASLKSLARHLLQKKIQVGCKGHSSVEDARTAMELYRLVEVPWEAELARSQPPRPPSPTDPITDSHQYMDDQYWPQDLMVGTL", "length": 335 }, "evidence": [ { "id": "A0A4X1WCN6", "url": "https://omabrowser.org/oma/group/A0A4X1WCN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "B2GUW6-1", "protein_name": "Apoptosis-enhancing nuclease", "gene_name": "Aen", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVPREVPESSLTSLKTKDVARRRHKRRSRQHQRFMARKALLQEQESLSMVPGPGLCPLPSPTQTPAGTEASGNRKQRTKARSGSKGLCSKRPVPREAPSSGPSKYVAIDCEMVGTGPQGRVSELARCSVVSYSGDVLYDKYIRPEMPIVDYRTRWSGITRQHMHKAIPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPGSQIRDTTYVPNLLSQPSSLTRARVSLKDLALNLLHKKIQVGHHGHSSVEDAMTAMELYQLVEVQWEQQVASTAKAHPEDRGPDSSTDVEQYMDDQYWPEDLAQSTRGDTREAQDRQEGEEGQGARSAPP", "length": 332 }, "evidence": [ { "id": "A0A4X1WCN6", "url": "https://omabrowser.org/oma/group/A0A4X1WCN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3ICD7-1", "protein_name": "Apoptosis-enhancing nuclease", "gene_name": "Aen", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MVLGEVPESTQCPSLTSLNTKDVVRKRHKRRSRQHQRFMARKALLQGNMAPGPESCPLSSPSQTPADTQASGSRRQRSKATPGGGGPCSKRPVTREAQRPGPSKCVAIDCEMVGTGPRGRVSELARCSVVSYNGDVLYDKYIRPEMPIVDYRTRWSGITRQHMLKAIPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRSQTRDTTYVPNLLSQPSFHTRARVSLKDLALHLLHKKIQVGHQGHSSVEDAMTAMELYQLVEVQWEQQEANNAKALPEDRGSDSSTDMEQYMEDQYWPDELAQSTSGEIREAQEGRE", "length": 320 }, "evidence": [ { "id": "A0A4X1WCN6", "url": "https://omabrowser.org/oma/group/A0A4X1WCN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8WTP8-1", "protein_name": "Apoptosis-enhancing nuclease", "gene_name": "AEN", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"MVAGEVPESTQCPSLTSLNTKDVVRRRHKRRSRQHQRFMARKALLQEQELLSTAPGPGLCLLPSPSQMPAVTEASDSRRQRPKARSGSNGLCSKKSVPREAPRPGPIKCVAIDCEMVGTGPQGRVSELARCSVVSYSGDVLYDKYIRPEMPIVDYRTRWSGITRQHMHKAIPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRSQTRDTTYVPNLLSQPSSLIRTRVSLKDLALNLLHKKIQVGHQGHSSVEDAMTAMELYQLVEVQWEQQVASSAQAPAEDRGPDSSTDVEQYMDDQYWPEDLTQSTGAETNGGPDRQEGEEGQGARSAPP", "length": 336 }, "evidence": [ { "id": "A0A4X1WCN6", "url": "https://omabrowser.org/oma/group/A0A4X1WCN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1WCN6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1WCN6" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": 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"https://www.uniprot.org/uniprotkb/A0A5G2Q6P4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q6P4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q6P4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SP03", "url": "https://www.uniprot.org/uniprotkb/F1SP03", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SP03-1", "url": "https://www.uniprot.org/uniprotkb/F1SP03-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHPGRGLGGPRARRSNMHFTSSSTGGLSSSQSSYSPSNREAMDPIAELLSQLSGVRRSAGGQLNSSGPSASQLQQLQMQLQLERQHAQAARQQLETARNATRRTNTSSVTTTITQSTATTNTANTESSQQTVQNSQFLLTRLNDPKMSETERQSMESERADRSLFVQELLLSTLVREESSSSDEDERGEMADFGAMGCVDIMPLDVALENLNLKESNKGNEPPPPPL", "length": 381, "header": "tr|A0A5G2Q6P4-1|A0A5G2Q6P4_PIG Isoform 1 of E3 ubiquitin-protein ligase KCMF1 OS=Sus scrofa OX=9823 GN=KCMF1 PE=1 SV=1 CANONICAL=A0A5G2Q6P4-1" }, "isoforms": [ { "isoform_ac": "A0A5G2Q6P4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q6P4/entry", "sequence": { "sequence": "MSRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHPGRGLGGPRARRSNMHFTSSSTGGLSSSQSSYSPSNREAMDPIAELLSQLSGVRRSAGGQLNSSGPSASQLQQLQMQLQLERQHAQAARQQLETARNATRRTNTSSVTTTITQSTATTNTANTESSQQTVQNSQFLLTRLNDPKMSETERQSMESERADRSLFVQELLLSTLVREESSSSDEDERGEMADFGAMGCVDIMPLDVALENLNLKESNKGNEPPPPPL", "length": 381, "header": "tr|A0A5G2Q6P4-1|A0A5G2Q6P4_PIG Isoform 1 of E3 ubiquitin-protein ligase KCMF1 OS=Sus scrofa OX=9823 GN=KCMF1 PE=1 SV=1 CANONICAL=A0A5G2Q6P4-1" }, "locus": { "chromosome": "3", "start_pos": 59708309, "end_pos": 59623862, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072210.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072210.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059678.1", "url": "https://www.ensembl.org/id/ENSSSCP00000059678.1" } ] } }, { "isoform_ac": "F1SP03-1", "url": "https://www.uniprot.org/uniprotkb/F1SP03/entry", "sequence": { "sequence": "GVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRAPRDLPFERQQGKNGVRHVRRMFHPGRGLGGPRARRSNMHFTSSSTGGLSSSQSSYSPSNREAMDPIAELLSQLSGVRRSAGGQLNSSGPSASQLQQLQMQLQLERQHAQAARQQLETARNATRRTNTSSVTTTITQSTATTNTANTESSQQTVQNSQFLLTRLNDPKMSETERQSMESERADRSLFVQELLLSTLVREESSSSDEDERGEMADFGAMGCVDIMPLDVALENLNLKESNKGNEPPPPPL", "length": 381, "header": "tr|F1SP03-1|F1SP03_PIG Computationally mapped isoform of E3 ubiquitin-protein ligase KCMF1 OS=Sus scrofa OX=9823 GN=KCMF1 PE=1 SV=4 CANONICAL=A0A5G2Q6P4-1" }, "locus": { "chromosome": "3", "start_pos": 59654086, "end_pos": 59623862, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000009026.5", "url": "https://www.ensembl.org/id/ENSSSCT00000009026.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008800.5", "url": "https://www.ensembl.org/id/ENSSSCP00000008800.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q6P4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q6P4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100524080", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524080", "resource": "KEGG Pathway" }, { "id": "R-SSC-6798695", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798695", "resource": "Reactome", "description": "Neutrophil degranulation" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q6P4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q6P4" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q6P4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q6P4" } ], "pmid": "" }, { "name": "synapse", "id": "GO:0045202", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045202", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q6P4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q6P4" } ], "pmid": "" }, { "name": "lysosome", "id": "GO:0005764", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005764", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q6P4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q6P4" } ], "pmid": "" }, { "name": "late endosome", "id": "GO:0005770", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005770", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q6P4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q6P4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 7, "go_terms": [ { "name": "response to oxidative stress", "id": "GO:0006979", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006979", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q6P4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q6P4" } ], "pmid": "" }, { "name": "proteasome-mediated ubiquitin-dependent protein catabolic process", "id": "GO:0043161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043161", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q6P4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q6P4" } ], "pmid": "" }, { "name": "protein K48-linked ubiquitination", "id": "GO:0070936", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070936", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q6P4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q6P4" } ], "pmid": "" }, { "name": "protein K63-linked ubiquitination", "id": "GO:0070534", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070534", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q6P4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q6P4" } ], "pmid": "" }, { "name": "HRI-mediated signaling", "id": "GO:0140468", "url": 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"name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q6P4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q6P4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 218, "end_pos": 220, "annotation": "n_glycosylation_sequon" }, { "start_pos": 253, "end_pos": 255, "annotation": "n_glycosylation_sequon" }, { "start_pos": 259, "end_pos": 261, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-6800434", "name": "Exocytosis of ficolin-rich granule lumen proteins", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "extracellular region, ficolin-1-rich granule lumen", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6800434", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6800434" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2Q6P4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 381, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2Q6P4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2Q6P4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2Q6P4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q6P4" }, { "id": "PS50157", "database": "PROSITE", "url": 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{ "start_pos": 253, "end_pos": 255 }, { "start_pos": 259, "end_pos": 261 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", 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Classification" ] }, { "id": "IPR017452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050427", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050427", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100522662", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522662", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ssc:110259446", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110259446", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FTVIPQM", "url": "https://omabrowser.org/oma/group/FTVIPQM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2Q7C4", "url": "https://www.orthodb.org/?gene=A0A5G2Q7C4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR48002", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48002", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13853", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13853", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020940306", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020940306", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2Q7C4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7C4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q7C4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7C4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MALRNHTRVSEFIFYGITQSQELSLLLFFFLSTVYVTTVLANLAIMVTVTWESRLHTPMYFLLRNLSVLDICFSSITAPKVLVDLLSRRKTISFNGCITQMFFFHLLGGADIFSLSVMAFDRYVAISKPLHYVTVMSRGRCTALIVASWLGGFVHSIVQVSLLLPLPFCGPNVVDGFYCDVPQVLKLACTDTFVLELLMISNNGLVTTLWFVLLLVSYTVILVMLRSHSGEGRKKAISTCTAHITVVTLHFVPCIYVYARPFTALPMDRAVSITFTVIIPVLNPMIYTLRNQEMKSAMRRLNGRLMLSARG", "length": 311, "header": "tr|A0A5G2Q7C4-1|A0A5G2Q7C4_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN=LOC110259446 PE=3 SV=1 CANONICAL=A0A5G2Q7C4-1" }, "isoforms": [ { "isoform_ac": "A0A5G2Q7C4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7C4/entry", "sequence": { "sequence": "MALRNHTRVSEFIFYGITQSQELSLLLFFFLSTVYVTTVLANLAIMVTVTWESRLHTPMYFLLRNLSVLDICFSSITAPKVLVDLLSRRKTISFNGCITQMFFFHLLGGADIFSLSVMAFDRYVAISKPLHYVTVMSRGRCTALIVASWLGGFVHSIVQVSLLLPLPFCGPNVVDGFYCDVPQVLKLACTDTFVLELLMISNNGLVTTLWFVLLLVSYTVILVMLRSHSGEGRKKAISTCTAHITVVTLHFVPCIYVYARPFTALPMDRAVSITFTVIIPVLNPMIYTLRNQEMKSAMRRLNGRLMLSARG", "length": 311, "header": "tr|A0A5G2Q7C4-1|A0A5G2Q7C4_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN=LOC110259446 PE=3 SV=1 CANONICAL=A0A5G2Q7C4-1" }, "locus": { "chromosome": "2", "start_pos": 11983042, "end_pos": 11982110, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082524.1", "url": "https://www.ensembl.org/id/ENSSSCT00000082524.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059700.1", "url": "https://www.ensembl.org/id/ENSSSCP00000059700.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q7C4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7C4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100522662", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522662", "resource": "KEGG Pathway" }, { "id": "ssc:110259446", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110259446", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2LKV1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100759941", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MALRNHTKVTEFIFCGLTQSQELSLLLFFFLFMVYLLTVLANVTIMVTVTSDSRLHTPMYFLLRNLSVLDICFSSITVPKVLVDLLSIRKTISFNGCFTQIFFFHLLGGADIFSLSVMAFDRYMAIFKPLHYVTIMSTGRCTALIVASWVGGFVHSIVQIYLLLPLPFCGPNVVDGFYCDVPQVLKLACADTFNLELLMISNNGLITTLWFVLLLVSYTVILTMLRSHTGEGKKKAISTCTSHITVVTLHFVPCIYVYARPFTALPMDRAVSVTLNSIVPVLNPMIYSLRNQEMKSAMKRLKKRLILSEVE", "length": 311 }, "evidence": [ { "id": "A0A5G2Q7C4", "url": "https://omabrowser.org/oma/group/A0A5G2Q7C4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "D3ZSJ2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4z4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELRNHTKVTEFIFCGLTQSQELSLLLFFFLSVVYIATVLVNVTIMVTVTWESHLHTPMYFLLRNLSVLDICFSSITVPKVLMDLLSRRKTISFNGCFTQIFFFHLLGGADIFSLSVMAFDRYMAIFKPLHYVTIMSKGRCTALIAASWVGGFIHSIVQISLLLPLPFCGPNVVDNFYCDVPQVLKLACTDTFVLELLMISNNGLITTLWFVLLLVSYTIILTMLRSHTGEGKRKAISTCTSHMTVVTLHFVPCIYVYARPFTALPMDRAISITLNIIVPVLNPMIYTLRNQEMKSAMKRLRKRLILSEVE", "length": 311 }, "evidence": [ { "id": "A0A5G2Q7C4", "url": "https://omabrowser.org/oma/group/A0A5G2Q7C4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8VFU9-1", "protein_name": "Olfactory receptor", "gene_name": "Or4z4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MELGNHTKVTEFIFCGLTQSQELSLLLFFFLSIVYITTVLVNVTIMVTVTWESRLHTPMYFLLRNLSVLDICFSSITVPKVLVDLLSRRKTISFNGCFTQIFFFHLLGGADIFSLSVMAFDRYMAIFRPLHYVTIMSRGRCTALIAASWVGGFVHSIVQIFLLLPLPFCGPNVVDSFYCDVPQVLKLACTDTFVLELLMISNNGLITTLWFVLLLVSYTVILTMLRSHTGEGRKKAISTCTSHITVVTLHFVPCIYVYARPFTALPMDRAVSITLNIIVPVLNPMIYTLRNQEMKSAMKRLRKRLILSEVE", "length": 311 }, "evidence": [ { "id": "A0A5G2Q7C4", "url": "https://omabrowser.org/oma/group/A0A5G2Q7C4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "G protein-coupled receptor activity", "id": 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"https://www.ensembl.org/id/ENSSSCT00000079468.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063034.2", "url": "https://www.ensembl.org/id/ENSSSCP00000063034.2" } ] } }, { "isoform_ac": "A0A5G2QJ33-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ33/entry", "sequence": { "sequence": "HKEKSTDVHSQGHHTQGCRLCTAQTPGRRVKIQPAFLSSRGAVFPTRPEALQLRAPGPAPLSCCLRARVAGPHHRLLQAAAPRVFRLHGGAARPRHVPGPAPRARARLTLSWALPTVQQTPVCAHRPDNPAFSDPPLEAVDVRQIYDKFPEKKGGLKELYEKGPPNAFFLVKFWADLNSTIQEGPGAFYGVSSQYSSAESMTISVSTKVCSFGKQVVEKVETEYARLENGRFVYRIHRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTSRDSQETLLVIAFVFEVSTSEHGAQHHVYKLVKD", "length": 309, "header": "tr|A0A5G2QJ33-1|A0A5G2Q7J7_PIG Computationally mapped isoform of Transcriptional enhancer factor TEF-5 OS=Sus scrofa OX=9823 GN=TEAD3 PE=4 SV=1 CANONICAL=A0A5G2Q7J7-1" }, "locus": { "chromosome": "7", "start_pos": 31339324, "end_pos": 31337893, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079379.1", "url": "https://www.ensembl.org/id/ENSSSCT00000079379.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064467.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064467.1" } ] } }, { "isoform_ac": "F1RYZ3-1", "url": "https://www.uniprot.org/uniprotkb/F1RYZ3/entry", "sequence": { "sequence": "IASNSWNASSSPGEAREDGPEGLDKGLDNDAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHLQVLARRKSREIQSKLKAMNLDQVSKDKALQSMASMSSAQIVSASVLQNKFSPPSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKPFAQPAYPVQPPLPPTLSSYEPLAPLPSAAASAPVWQDRTIASSRLRLLEYSAFMEVQRDPDTYSKHLFVHIGQNPAFSDPPLEAVDVRQIYDKFPEKKGGLKELYEKGPPNAFFLVKFWADLNSTIQEGPGAFYGVSSQYSSAESMTISVSTKVCSFGKQVVEKVETEYARLENGRFVYRIHRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTSRDSQETLLVIAFVFEVSTSEHGAQHHVYKLVKD", "length": 434, "header": "tr|F1RYZ3-1|A0A5G2Q7J7_PIG Computationally mapped isoform of Transcriptional enhancer factor TEF-5 OS=Sus scrofa OX=9823 GN=TEAD3 PE=4 SV=5 CANONICAL=A0A5G2Q7J7-1" }, "locus": { "chromosome": "7", "start_pos": 31351452, "end_pos": 31337893, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000001722.5", "url": "https://www.ensembl.org/id/ENSSSCT00000001722.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000001678.5", "url": "https://www.ensembl.org/id/ENSSSCP00000001678.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBE2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBE2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-2032785", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2032785", "resource": "Reactome", "description": "YAP1- and WWTR1 (TAZ)-stimulated gene expression" }, { "id": "R-SSC-8951671", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8951671", "resource": "Reactome", "description": "RUNX3 regulates YAP1-mediated transcription" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6A176-1", "protein_name": "TEA domain transcription factor 3", "gene_name": "Tead3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQLGGLARRGDCSGGFWMAGTRDTLGSLSYCPACARAQDLGAGNFGGKGGDALREAPPTPPHRPPPPRPGGWEARSVPGARAWPRRVPGCTPGAAGLEGLPPGLVSGVPFGLREPAGRGSTQALARARRCARCSRLRWDPARVSGSHGSGHPGGSGPEPRATSTIASNSWTANNSPGEAREDGSEGLDKGLDNDAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVCSHLQVLARRKSREIQSKLKAMNLDQVSKDKALQSMASMSSAQIVSASVLQNKFSPPSPLPQAVFSTSRFWSSPPLLGQQPGPSQDIKPFAQPAYPIQPPLPPTLNSYESLAPLPPAAATAASVPAWQDRTIASSRLRLLEYSAFMEVQRDPDTYSKHLFVHIGQTNPAFSDPPLEAVDVRQIYDKFPEKKGGLKELYEKGPPNAFFLVKFWADLNSTIQEGPGAFYGVSSQYSSADSMTISVSTKVCSFGKQVVEKVETEYARLENGRFVYRIHRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTSRDSQETLLVIAFVFEVSTSEHGAQHHVYKLVKD", "length": 601 }, "evidence": [ { "id": "A0A5G2Q7J7", "url": "https://omabrowser.org/oma/group/A0A5G2Q7J7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V1A931-1", "protein_name": "Transcriptional enhancer factor TEF-5", "gene_name": "TEAD3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MDKSLDNDAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARKKVREYQVGIKAMNLDQVSKDKALQSMASMSSAQIVSASVLQNKLSPPPPLPQAVFSAAPRFWSGPIPGQPGPSQDIKPFAQPAYPIQPPMPPSLASYEPLAPLPPAASAVPVWQDRTIASAKLRLLEYSAFMEVPRDAETYSKHLFVHIGQTNPSYSDPLLEAVDIRQIYDKFPEKKGGLKELYERGPQNSFFLVKFWADLNSTIQDGPGTFYGVSSQYSSAENMTITVSTKVCSFGKQVVEKVETEYARLENSRFVYRIHRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTNRDTQETLLCIAFVFEVSTSEHGAQHHVYKLVKD", "length": 411 }, "evidence": [ { "id": "A0A5G2Q7J7", "url": "https://omabrowser.org/oma/group/A0A5G2Q7J7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0AAA9TWQ4-1", "protein_name": "Transcriptional enhancer factor TEF-5", "gene_name": "TEAD3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": 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"url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7J7" } ], "pmid": "" }, { "name": "hippo signaling", "id": "GO:0035329", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035329", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q7J7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7J7" } ], "pmid": "" }, { "name": "embryonic organ development", "id": "GO:0048568", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048568", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q7J7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7J7" } ], "pmid": "" }, { "name": "asymmetric neuroblast division", "id": "GO:0055059", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055059", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q7J7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7J7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": 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More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1253282", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1253282" } ] }, { "id": "R-SSC-1253300", "name": "ERBB4 binds WWP1/ITCH ubiquitin ligases", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
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The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
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The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
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The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
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The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
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"length": 454, "header": "tr|F1SSN9-1|F1SSN9_PIG Computationally mapped isoform of DLG associated protein 5 OS=Sus scrofa OX=9823 GN=DLGAP5 PE=3 SV=3 CANONICAL=A0A5G2Q9D1-1" }, "locus": { "chromosome": "1", "start_pos": 184548077, "end_pos": 184525658, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005573.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005573.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005435.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005435.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9D1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9D1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "kinetochore assembly", "id": "GO:0051382", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051382", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9D1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9D1" } ], "pmid": "" }, { "name": "chromosome segregation", "id": "GO:0007059", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007059", 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CANONICAL=A0A5G2Q9H6-1" }, "locus": { "chromosome": "3", "start_pos": 18046588, "end_pos": 18043047, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069825.2", "url": "https://www.ensembl.org/id/ENSSSCT00000069825.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063950.2", "url": "https://www.ensembl.org/id/ENSSSCP00000063950.2" } ] } }, { "isoform_ac": "I3LRN6-1", "url": "https://www.uniprot.org/uniprotkb/I3LRN6/entry", "sequence": { "sequence": "MDPGNWSSFIFQGHAQNPLQVGAELQSRFFASQGCAQSPFQAAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAAAVAAAPPAPAAASTVDTAALKQPPAPPPPPPPVSAPAAEAAPPVSAATIAAAAATAVVAPTSTVAVAPVASALEKKTKSKGPYICALCAKEFKNGYNLRRHEAIHTGAKAGRVPSGAMKMPTMVPLSLLSVPQLSGAGGGGGEAGAGGGAAAVAAGGVVTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYHVRSHDGAVHKPYNCSHCGKSFSRPDHLNSHVRQVHSTERPFKCEKCEAAFATKDRLRAHTVRHEEKVPCHVCGKMLSSAYISDHMKVHSQGPHHVCELCNKGTGEVCPMAAAAAAAAAAAAAAVAAPPTAVGSLSGAEGVPVSSQPLPSQPW", "length": 456, "header": "tr|I3LRN6-1|A0A5G2Q9H6_PIG Computationally mapped isoform of Myc-associated zinc finger protein OS=Sus scrofa OX=9823 GN=MAZ PE=4 SV=3 CANONICAL=A0A5G2Q9H6-1" }, "locus": { "chromosome": "3", "start_pos": 18046588, "end_pos": 18042493, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027242.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027242.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000026774.3", "url": "https://www.ensembl.org/id/ENSSSCP00000026774.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 71, "start_aa": "Thr", "end_pos": 71, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr71", "evidence": [ { "id": "GLY_001152", 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"title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2Q9Z7-1", "uniprot_ac": "A0A5G2Q9Z7", "uniprot_id": "A0A5G2Q9Z7_PIG", "mass": { "chemical_mass": 62516.0, "monoisotopic_mass": 62516.0 }, "refseq": {}, "gene_names": [ { "name": "TRIM26", "type": "recommended", "evidence": [ { "id": "A0A5G2Q9Z7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9Z7" } ] } ], "protein_names": [ { "name": "Tripartite motif-containing protein 26", "type": "recommended", "evidence": [ { "id": "A0A5G2Q9Z7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9Z7/entry#names_and_taxonomy" } ] }, { "name": "2.3.2.27", "type": "synonym", "evidence": [ { "id": "A0A5G2Q9Z7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9Z7/entry#names_and_taxonomy" } ] }, { "name": "Zinc finger protein 173", "type": "synonym", "evidence": [ { "id": "A0A5G2Q9Z7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9Z7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9Z7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9Z7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TRIM26", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9Z7", "locus": { "chromosome": "7", "start_pos": 22756341, "end_pos": 22780259, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000001233", "url": "https://www.ensembl.org/id/ENSSSCG00000001233" } ] } } ], "crossref": [ { "id": "A0A5G2Q9Z7", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2Q9Z7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000001233", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000001233", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd15826", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd15826", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd16598", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd16598", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd19765", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd19765", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000315", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000315", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001841", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001841", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001870", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001870", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003877", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003877", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003879", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003879", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006574", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006574", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013320", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013320", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043136", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043136", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050143", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050143", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PFFWLNW", "url": "https://omabrowser.org/oma/group/PFFWLNW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR24103", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24103", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00622", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00622", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00643", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00643", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13765", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13765", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF15227", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15227", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2Q9Z7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9Z7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q9Z7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9Z7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5UP30", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UP30", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5UP30-1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UP30-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDIHPVSGGRPVCPLCKKPFTKENIRPVWQLASLVENIERLKVDTGRQPGEVAREQQDTRLCERHQEKLHYYCEDDGKLLCVMCRESREHRPHTAVLVEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAELKKLQDQRQRILAAFEQGHQFLWEREQHLLDQLAKLEQEVTEGREKYKTRGVGELARLAQVISELEGKAQQPAAELMQDTRDFLTRYPRKKFWIGKPIARVVKKRTGEFSDKLLSLQRGLREFQGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYSGLYQSSYLHPQQFECEPGVLGSKGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGAGFGYGDGYDDGADEDEESLGDEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTRPEAELFPAQRPRRVGIALDYEGGTVTFTNAESQELIYTFKATFTRRLLPFLWLRWPGTRLLLRP", "length": 544, "header": "tr|A0A5G2Q9Z7-1|A0A5G2Q9Z7_PIG Isoform 1 of Tripartite motif-containing protein 26 OS=Sus scrofa OX=9823 GN=TRIM26 PE=3 SV=3 CANONICAL=A0A5G2Q9Z7-1" }, "isoforms": [ { "isoform_ac": "A0A5G2Q9Z7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9Z7/entry", "sequence": { "sequence": "MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDIHPVSGGRPVCPLCKKPFTKENIRPVWQLASLVENIERLKVDTGRQPGEVAREQQDTRLCERHQEKLHYYCEDDGKLLCVMCRESREHRPHTAVLVEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAELKKLQDQRQRILAAFEQGHQFLWEREQHLLDQLAKLEQEVTEGREKYKTRGVGELARLAQVISELEGKAQQPAAELMQDTRDFLTRYPRKKFWIGKPIARVVKKRTGEFSDKLLSLQRGLREFQGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYSGLYQSSYLHPQQFECEPGVLGSKGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGAGFGYGDGYDDGADEDEESLGDEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTRPEAELFPAQRPRRVGIALDYEGGTVTFTNAESQELIYTFKATFTRRLLPFLWLRWPGTRLLLRP", "length": 544, "header": "tr|A0A5G2Q9Z7-1|A0A5G2Q9Z7_PIG Isoform 1 of Tripartite motif-containing protein 26 OS=Sus scrofa OX=9823 GN=TRIM26 PE=3 SV=3 CANONICAL=A0A5G2Q9Z7-1" }, "locus": { "chromosome": "7", "start_pos": 22767662, "end_pos": 22757797, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074988.3", "url": "https://www.ensembl.org/id/ENSSSCT00000074988.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060799.3", "url": "https://www.ensembl.org/id/ENSSSCP00000060799.3" } ] } }, { "isoform_ac": "A0ABB5UP30-1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UP30/entry", "sequence": { "sequence": "MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDIHPVSGGRPVCPLCKKPFTKENIRPVWQLASLVENIERLKVDTGRQPGEVAREQQDTRLCERHQEKLHYYCEDDGKLLCVMCRESREHRPHTAVLVEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAELKKLQDQRQRILAAFEQGHQFLWEREQHLLDQLAKLEQEVTEGREKYKTRGVGELARLAQVISELEGKAQQPAAELMQDTRDFLTRYPRKKFWIGKPIARVVKKRTGEFSDKLLSLQRGLREFQVSVTLDPQSASGYLQLSEDWKCVTYSGLYQSSYLHPQQFECEPGVLGSKGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGAGFGYGDGYDDGADEDEESLGDEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTRPEAELFPAQRPRRVGIALDYEGGTVTFTNAESQELIYTFKATFTRRLLPFLWLRWPGTRLLLRP", "length": 533, "header": "tr|A0ABB5UP30-1|A0ABB5UP30_PIG Computationally mapped isoform of Tripartite motif containing 26 OS=Sus scrofa OX=9823 GN=TRIM26 PE=4 SV=1 CANONICAL=A0A5G2Q9Z7-1" }, "locus": { "chromosome": "7", "start_pos": 22767662, "end_pos": 22757797, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107562.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107562.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000081953.1", "url": "https://www.ensembl.org/id/ENSSSCP00000081953.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9Z7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9Z7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2LLS2-1", "protein_name": "Tripartite motif-containing protein 26", "gene_name": "Trim26", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAASAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTGDIRPVSGSRPVCPLCKKPFKKENIRPVWQLASLVENIERLKVDNGRQPGELAREPQDMKLCERHQEKLHYYCEDDGKLLCVMCRESREHRPHTAVLVEKAALPHREKILNHLNTLRRDREKIQGFQAKGEADITAALTKLQEQRQYIVAEFKQGHQFLKKREQHLLDQLATLEQLLTEGREKFKTRGVSELGRLTLVISELEGKARQPAAELMQDACSTQDTKDFANRYPRKKFWIGKAIPHMVKRKAGEFSDKLLSLQRGLRQFQGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVIYTSHYQSDCLHPQQFDCEPGVLGSKGFTWGKVYWEVELEREGWSEDEEEDGEEEEDGEEEEDDEEAGYGDGYEEWETDEDEESLGEEEEEEEEEEEEVLESCMVGVAKDSMKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAQLFPVLRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP", "length": 546 }, "evidence": [ { "id": "A0A5G2Q9Z7", "url": "https://omabrowser.org/oma/group/A0A5G2Q9Z7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3X823-1", "protein_name": "Tripartite motif-containing protein 26", "gene_name": "LOC785873", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAASAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDIRSISGGRPVCPLCKKPFKKENIRPVWQLASLVENIERLKVDRGRQPGEVAQEQADVRLCERHREKLHYYCEDDGKLLCVMCRESREHRPHSAVLVEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKKLQDQRQCIVAEFEQGHQFLREREQHLLGQLAKLEQELTEGREKFKTRGVGELARLAQVISELEGKAQQPAAELMQDTRDFLNRYPRKKFWIGKPIARVVKKKTGEFSDKLQSLQRGLREFQGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYSGLYQGAYLYPQQFDCEPGVLGSKGFTWGKVYWEVEVEREGWSEDEDEGDEAEEGEEEEEEEEAGYRDGYDDWETDEDEESLGDEEEEAEEEEEEVLESCLVGVARDSVKRKGDLSLRPEDGVWALRLSSAGIWANTSPEAELFPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLLPFLWLKWPGTRLLLRP", "length": 539 }, "evidence": [ { "id": "A0A5G2Q9Z7", "url": "https://omabrowser.org/oma/group/A0A5G2Q9Z7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q12899-1", "protein_name": "Tripartite motif-containing protein 26", "gene_name": "TRIM26", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLLCVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKKLQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLALVISELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREFQGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEPGVLGSKGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDEESLGDEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAELFPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP", "length": 539 }, "evidence": [ { "id": "A0A5G2Q9Z7", "url": "https://omabrowser.org/oma/group/A0A5G2Q9Z7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q99PN3-1", "protein_name": "Tripartite motif-containing protein 26", "gene_name": "Trim26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAVSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTSDIRPISGNRPVCPLCKKPFKKENIRPVWQLASLVENIERLKVDNGRQPGELAREPQDMKLCERHQEKLHYYCEDDGKLLCVMCRESREHRPHTAVLVEKAALPHREKILNHLNTLRRDRDKIQGFQAKGEADILAALTKLQEQRQYIVAEFKQGHQFLKKREQHLLDQLATLEQLLTEGREKFKTRGVSELDRLTLVISELEGKARQPAAELMQDVCTTQDTKDFANKYPRKKFWIGKAIPHMVKRKAGEFSDKLLSLQRGLRQFQGKLLRDLEYKTVSVTLDPQSASGYLHLSEDWKCVTYTGQYQSDCLLPQQFDCEPGVLGSKGFTWGKVYWEVELEREGWSEDEEEGEEEEEGEEEEEDEEVGYGDGYEDWETDEEDESLGEEEEEEEEEEEEVQESCMVGVAKDSVKRKGDLSLRPEDGVWALRLSPSGIWANTSPEAQLFPVLRPRRVGIALDYEGGTVTFTNAESQELIYTFTTTFTRRLVPFLWLKWPGARLLLRP", "length": 545 }, "evidence": [ { "id": "A0A5G2Q9Z7", "url": "https://omabrowser.org/oma/group/A0A5G2Q9Z7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "suppression of viral release by host", "id": "GO:0044790", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0044790", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9Z7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9Z7" } ], "pmid": "" }, { "name": "positive regulation of non-canonical NF-kappaB signal transduction", "id": "GO:1901224", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901224", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9Z7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9Z7" } ], "pmid": "" }, { "name": "proteasome-mediated ubiquitin-dependent protein catabolic process", "id": "GO:0043161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043161", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9Z7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9Z7" } ], "pmid": "" }, { "name": "protein K11-linked ubiquitination", "id": "GO:0070979", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070979", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9Z7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9Z7" } ], "pmid": "" }, { "name": "host-mediated suppression of symbiont invasion", "id": 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"database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTFNCPNLHFYSLLIWFCFNYILREHQIVSSEMLPAFSETANVERKQDLSEDQTEHQKAGLGEGIEPISKRQMKKLMKQKQWEEQRELRKQKRKEKRKRKQLERQCQLESNSDGSDRKRIRRDVVHSTLRLIIDCSFDSLMVLKDIKKLHKQIQRCYAENRRALHPVQFYLTSHGGQLKKNMDENDKGWVNWKDIHIKPEHYSEFIKKEDLIYLTSDSPNVLKELDESKAYVIGGLVDHNHHKGLTYKQASDYGIDHAQLPLGNFVKMNSRKVLAVNHVFEIILEYLETRDWQEAFFTILPQRKGAVPTDKACESSSHDKEFATAEGGLNSDSSEEENSRNEQNSPHEEKQDKENSSESTVNSVPQVSCSHSPPLQDTVQDQQQDEVNNETKPQDGRTLGL", "length": 401, "header": "tr|A0A5G2QA23-1|A0A5G2QA23_PIG Isoform 1 of tRNA methyltransferase 10 homolog A OS=Sus scrofa OX=9823 GN=TRMT10A PE=4 SV=1 CANONICAL=A0A5G2QA23-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QA23-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA23/entry", "sequence": { "sequence": 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"https://www.uniprot.org/uniprotkb/A0A5G2R182/entry", "sequence": { "sequence": "MAAKSEHQIVSSEMLPAFSETANVERKQDLSEDQTEHQKAGLGEGIEPISKRQMKKLMKQKQWEEQRELRKQKRKEKRKRKQLERQCQLESNSDGSDRKRIRRDVVHSTLRLIIDCSFDSLMVLKDIKKLHKQIQRCYAENRRALHPVQFYLTSHGGQLKKNMDENDKGWVNWKDIHIKPEHYSEFIKKEDLIYLTSDSPNVLKELDESKAYVIGGLVDHNHHKGLTYKQASDYGIDHAQLPLGNFVKMNSRKVLAVNHVFEIILEYLETRDWQEAFFTILPQRKGAVPTDKACESSSHDKEFATAEGGLNSDSSEEENSRNEQNSPHEEKQDKENSSESTVNSVPQ", "length": 347, "header": "tr|A0A5G2R182-1|A0A5G2QA23_PIG Computationally mapped isoform of tRNA methyltransferase 10 homolog A OS=Sus scrofa OX=9823 GN=TRMT10A PE=4 SV=1 CANONICAL=A0A5G2QA23-1" }, "locus": { "chromosome": "8", "start_pos": 120900025, "end_pos": 120885624, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088415.1", "url": "https://www.ensembl.org/id/ENSSSCT00000088415.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064272.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064272.1" } ] } }, { "isoform_ac": "F1S0Z2-1", "url": "https://www.uniprot.org/uniprotkb/F1S0Z2/entry", "sequence": { "sequence": "MAAKSEHQIVSSEMLPAFSETANVERKQDLSEDQTEHQKAGLGEGIEPISKRQMKKLMKQKQWEEQRELRKQKRKEKRKRKQLERQCQLESNSDGSDRKRIRRDVVHSTLRLIIDCSFDSLMVLKDIKKLHKQIQRCYAENRRALHPVQFYLTSHGGQLKKNMDENDKGWVNWKDIHIKPEHYSEFIKKEDLIYLTSDSPNVLKELDESKAYVIGGLVDHNHHKGLTYKQASDYGIDHAQLPLGNFVKMNSRKVLAVNHVFEIILEYLETRDWQEAFFTILPQRKGAVPTDKACESSSHDKEFATAEGGLNSDSSEEENSRNEQNSPHEEKQDKENSSESTVNSVPQVSCSHSPPLQDTVQDQQQDEVNNETKPQDGRTLGL", "length": 382, "header": "tr|F1S0Z2-1|A0A5G2QA23_PIG Computationally mapped isoform of tRNA methyltransferase 10 homolog A OS=Sus scrofa OX=9823 GN=TRMT10A PE=4 SV=4 CANONICAL=A0A5G2QA23-1" }, "locus": { "chromosome": "8", "start_pos": 120917347, "end_pos": 120885624, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000010053.4", "url": "https://www.ensembl.org/id/ENSSSCT00000010053.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000009790.4", "url": 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"https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA23", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA23" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA23", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA23" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA23", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA23" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { 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"MINACRDFLALAETHSRKWQRALQYEQEQRVHLEETIEQLAKQHNSLERAFRSAPGRASNPTKSFSEGSLLTTKGEDSEEDEDTEYFDAMEDSTSYITVITEAKEDRKTESGTTGSVEWTSDNVLDGASLVPKGPKVKRRVRIPDKPNYSLNLWSIMKNCIGRELSKIPMPVNFNEPLSMLQRLTEDLEYHHLLDKAVHCTNSVEQMCLVAAFSVSSYSTTVHRIAKPFNPMLGETFELDRLDDMGLRSLCEQVSHHPPSAAHYVFSKHGWSLWQEITISSKFRGKYLSIMPLGAIHLEFQASGNHYVWRKSTSTVHNIIVGKLWIDQTGDIEIVNHRTKDRCQLKFLPYSYFSKEMARKVTGVVSDSQGKAHYVLSGSWDEQMECAKIVQSSPSSPSSDGKQKTVYQTLPAKLLWKKYPLPENAENMYYFSELALTLNEHEEGVAPTDSRLRPDQRLMEKGHWDEANTEKQRLEEKQRVNRRRRLEACARGCGAEEEKEAEVYVPLWFERRLDPLTGETACMYKGGYWEAKEKQDWHMCPNIF", "length": 544, "header": "tr|A0A5G2QMW5-1|A0A5G2QMW5_PIG Computationally mapped isoform of Oxysterol-binding protein OS=Sus scrofa OX=9823 GN=OSBP2 PE=3 SV=1 CANONICAL=A0A5G2QAH5-1" }, "locus": { "chromosome": "14", "start_pos": 47736581, "end_pos": 47689447, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081623.2", "url": "https://www.ensembl.org/id/ENSSSCT00000081623.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059656.1", "url": "https://www.ensembl.org/id/ENSSSCP00000059656.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 596, "start_aa": "Thr", "end_pos": 596, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr596", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAH5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAH5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAH5", "url": 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"MRPPVLVAVLLWLPGLWAEDNECHSQAEGPGGQSGGPPLSVSVGSRGRAASLAVSWAAGGPGRPSHLLRLSRLGPLGTPEGQQLQAHTNASSFEFQDLVPGSHYRLEVTVLHPCGQNATTILTAHTAPATVQDLQLQSFGSPTSLQAWWGAAPGRQDSYQLLLYELEPQMVAHNISMSPGTLRYNFSDLSPGSEYALEVTTWAATLQAKTSTHQWTAPVAPGQLGLHALGTSTLQAFWNGSGGAAWLHLVLTDLLGGPNLTAEVRRGVSNHTFRHLSPGTAYRLTLSAVAGPHWAAGPNTIEWTHPSAPLDLVLTPQPPGLSAHWRAGPGAQDGYLLRLSGLVETISLGPGALNATFPGPLPAGHYTLQLRVLAGPYDAWAQASAWLDAAAENRRGNGTELPLDVLEATREPGDQALLYPEGSPGLPGNTSVPPAATQVPLGGHGALYQVDAVSSLQNTTQNLANHTGPLAPQSLEVIGRGSPYDLSIGWAPAPGQREGYRVSWHQEGSQSPLDGLVDLGPDNSSLTLRGLVPGSCYTVSLWTWAGNLSSSIQMARACTLPVPPANLSLGLGAQPPALRASWSPPAGDWDGFLLRLYRLRPPALEGEETLAPEAQNFSWDQLAPGTEFLAWLATLRGPDESSGVNATGWTPPLAPPLVNVTSEGPTHLRASWVHAPGGRDGYQVTLYQAGVRVGSSPVGAQVDGASFSALTPGTKYEVEVVAQAGPLCAAAANASGWTSPHVPVELLVSMQAHSAVVSLAWASPLGHGVCHALLLEAGPLSKEHPLVLGQSHLVLRNLTPGRNLSLSVLCQAGPLQATTHPVVLPVEPDPVEDVQCQPEATRLVLAWTVPAGDVGTCLVVAEQLAAGGDAHLVFQAKTLRGSVLLSSLAPATSYRLSLSVLGRNGLWSRAVTLVCATSAQAWHPLELATAPQLEPKTGMGVIITPGMFGKDDGQIQWYGVIATTNMSLVLPPREAVNHTWYDHYYGGHDSYLAILLPNPFYPGPWAVPTSWMVPMGTEVCGHTQDICNGQLKPGSQYRFSVVAFTRYSAPETLIFFSAFSEPRASVSWAAVPVPAVVSVVAGCILSMGATLGLLYWRRVKGQRADETLYSQELTVSKLRRTHRPIPVHSFRQNYEAKRAHTHQAFFQEFEELKEVGKEQPRLEAEHPANTAKNRYPHVLPYDHSRVRLTLLDGEPHSDYINASFIPGYTHPQEFIATQGPLKKTLEDFWRLVWEQQVRVIVMLTVGMENGRVLCEHYWPANPTPVTHGHITVHLLAEEPEEEWTKREFQLQHAAQPPPRRVKQLQFTTWPDHSVPEAPSSLLAFMELVREQAREAQGTGPILVHCSAGVGRSGTFVALSRLLQQLEEEQTVDVFHTVYTLRLHRPLMIQTPSQYVFLHSCLLSRILEGPPSSSEATEARRGSWGASSAPRAAQAPPRPQPIPVRDLAQACAERAANADAGFLGEYKLLLQALKDQAGSMTPPPGCEQDGATSDGHCHEGSAPVEEGIHGEMPEAWLFPGGPSGRDHVVLTGPAGPAELWGLVWEHGARVLVSLCPPGLQEKEFWPTGTQPIVTDGVTVHWVAENSVAGWPCTLFSVTHVSLQLKVNCSKGAAPLGTFLAVDRLLQQAGAEGTVDIFTVALQPLSPHPLASAPRSSTHTSTAV", "length": 1662, "header": "tr|A0A5G2QAQ7-1|A0A5G2QAQ7_PIG Isoform 1 of protein-tyrosine-phosphatase OS=Sus scrofa OX=9823 GN=PTPRV PE=3 SV=2 CANONICAL=A0A5G2QAQ7-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QAQ7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAQ7/entry", "sequence": { "sequence": "MRPPVLVAVLLWLPGLWAEDNECHSQAEGPGGQSGGPPLSVSVGSRGRAASLAVSWAAGGPGRPSHLLRLSRLGPLGTPEGQQLQAHTNASSFEFQDLVPGSHYRLEVTVLHPCGQNATTILTAHTAPATVQDLQLQSFGSPTSLQAWWGAAPGRQDSYQLLLYELEPQMVAHNISMSPGTLRYNFSDLSPGSEYALEVTTWAATLQAKTSTHQWTAPVAPGQLGLHALGTSTLQAFWNGSGGAAWLHLVLTDLLGGPNLTAEVRRGVSNHTFRHLSPGTAYRLTLSAVAGPHWAAGPNTIEWTHPSAPLDLVLTPQPPGLSAHWRAGPGAQDGYLLRLSGLVETISLGPGALNATFPGPLPAGHYTLQLRVLAGPYDAWAQASAWLDAAAENRRGNGTELPLDVLEATREPGDQALLYPEGSPGLPGNTSVPPAATQVPLGGHGALYQVDAVSSLQNTTQNLANHTGPLAPQSLEVIGRGSPYDLSIGWAPAPGQREGYRVSWHQEGSQSPLDGLVDLGPDNSSLTLRGLVPGSCYTVSLWTWAGNLSSSIQMARACTLPVPPANLSLGLGAQPPALRASWSPPAGDWDGFLLRLYRLRPPALEGEETLAPEAQNFSWDQLAPGTEFLAWLATLRGPDESSGVNATGWTPPLAPPLVNVTSEGPTHLRASWVHAPGGRDGYQVTLYQAGVRVGSSPVGAQVDGASFSALTPGTKYEVEVVAQAGPLCAAAANASGWTSPHVPVELLVSMQAHSAVVSLAWASPLGHGVCHALLLEAGPLSKEHPLVLGQSHLVLRNLTPGRNLSLSVLCQAGPLQATTHPVVLPVEPDPVEDVQCQPEATRLVLAWTVPAGDVGTCLVVAEQLAAGGDAHLVFQAKTLRGSVLLSSLAPATSYRLSLSVLGRNGLWSRAVTLVCATSAQAWHPLELATAPQLEPKTGMGVIITPGMFGKDDGQIQWYGVIATTNMSLVLPPREAVNHTWYDHYYGGHDSYLAILLPNPFYPGPWAVPTSWMVPMGTEVCGHTQDICNGQLKPGSQYRFSVVAFTRYSAPETLIFFSAFSEPRASVSWAAVPVPAVVSVVAGCILSMGATLGLLYWRRVKGQRADETLYSQELTVSKLRRTHRPIPVHSFRQNYEAKRAHTHQAFFQEFEELKEVGKEQPRLEAEHPANTAKNRYPHVLPYDHSRVRLTLLDGEPHSDYINASFIPGYTHPQEFIATQGPLKKTLEDFWRLVWEQQVRVIVMLTVGMENGRVLCEHYWPANPTPVTHGHITVHLLAEEPEEEWTKREFQLQHAAQPPPRRVKQLQFTTWPDHSVPEAPSSLLAFMELVREQAREAQGTGPILVHCSAGVGRSGTFVALSRLLQQLEEEQTVDVFHTVYTLRLHRPLMIQTPSQYVFLHSCLLSRILEGPPSSSEATEARRGSWGASSAPRAAQAPPRPQPIPVRDLAQACAERAANADAGFLGEYKLLLQALKDQAGSMTPPPGCEQDGATSDGHCHEGSAPVEEGIHGEMPEAWLFPGGPSGRDHVVLTGPAGPAELWGLVWEHGARVLVSLCPPGLQEKEFWPTGTQPIVTDGVTVHWVAENSVAGWPCTLFSVTHVSLQLKVNCSKGAAPLGTFLAVDRLLQQAGAEGTVDIFTVALQPLSPHPLASAPRSSTHTSTAV", "length": 1662, "header": "tr|A0A5G2QAQ7-1|A0A5G2QAQ7_PIG Isoform 1 of protein-tyrosine-phosphatase OS=Sus scrofa OX=9823 GN=PTPRV PE=3 SV=2 CANONICAL=A0A5G2QAQ7-1" }, "locus": { "chromosome": "10", "start_pos": 24357840, "end_pos": 24340327, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087203.2", "url": "https://www.ensembl.org/id/ENSSSCT00000087203.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061102.2", "url": "https://www.ensembl.org/id/ENSSSCP00000061102.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAQ7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAQ7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAQ7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAQ7" } ], "pmid": "" }, { "name": "axon guidance", "id": "GO:0007411", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007411", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAQ7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAQ7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAQ7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAQ7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "protein tyrosine phosphatase activity", "id": "GO:0004725", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004725", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAQ7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAQ7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 117, "end_pos": 119, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1201, "end_pos": 1203, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1606, "end_pos": 1608, "annotation": "n_glycosylation_sequon" }, { "start_pos": 174, "end_pos": 176, "annotation": "n_glycosylation_sequon" }, { "start_pos": 185, "end_pos": 187, "annotation": "n_glycosylation_sequon" }, { "start_pos": 239, "end_pos": 241, "annotation": "n_glycosylation_sequon" }, { "start_pos": 259, "end_pos": 261, "annotation": "n_glycosylation_sequon" }, { "start_pos": 270, "end_pos": 272, "annotation": "n_glycosylation_sequon" }, { "start_pos": 354, "end_pos": 356, "annotation": "n_glycosylation_sequon" }, { "start_pos": 397, "end_pos": 399, "annotation": "n_glycosylation_sequon" }, { "start_pos": 429, "end_pos": 431, "annotation": "n_glycosylation_sequon" }, { "start_pos": 458, "end_pos": 460, "annotation": "n_glycosylation_sequon" }, { "start_pos": 465, "end_pos": 467, "annotation": "n_glycosylation_sequon" }, { "start_pos": 523, "end_pos": 525, "annotation": "n_glycosylation_sequon" }, { "start_pos": 547, "end_pos": 549, "annotation": "n_glycosylation_sequon" }, { "start_pos": 566, "end_pos": 568, "annotation": "n_glycosylation_sequon" }, { "start_pos": 616, "end_pos": 618, "annotation": "n_glycosylation_sequon" }, { "start_pos": 645, "end_pos": 647, "annotation": "n_glycosylation_sequon" }, { "start_pos": 659, "end_pos": 661, "annotation": "n_glycosylation_sequon" }, { "start_pos": 733, "end_pos": 735, "annotation": "n_glycosylation_sequon" }, { "start_pos": 797, "end_pos": 799, "annotation": "n_glycosylation_sequon" }, { "start_pos": 803, "end_pos": 805, "annotation": "n_glycosylation_sequon" }, { "start_pos": 89, "end_pos": 91, "annotation": "n_glycosylation_sequon" }, { "start_pos": 965, "end_pos": 967, "annotation": "n_glycosylation_sequon" }, { "start_pos": 977, "end_pos": 979, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "10684", "name": "", "equation": "O-phospho-L-tyrosyl-[protein] + H2O = L-tyrosyl-[protein] + phosphate", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "10684", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/10684" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QAQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAQ7" }, { "id": "PS50853", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50853" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Fibronectin type-III", "eco_id": "ECO_0000259", "start_pos": 37, "end_pos": 129, "start_aa": "Pro", "end_aa": "Ala", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A5G2QAQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAQ7" }, { "id": "PS50056", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50056" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Tyrosine specific protein 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"https://www.uniprot.org/uniprotkb/F1S1C7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QB37", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB37" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QB37", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB37" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QB37", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB37" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QB37", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB37" } ], "pmid": "" }, { "name": "protein serine/threonine phosphatase activity", "id": "GO:0004722", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004722", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QB37", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB37" } ], "pmid": "" }, { "name": "protein tyrosine/serine/threonine phosphatase activity", "id": "GO:0008138", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008138", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QB37", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB37" } ], "pmid": "" }, { "name": "protein tyrosine phosphatase activity", "id": "GO:0004725", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004725", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QB37", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB37" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "10684", "name": "", "equation": "O-phospho-L-tyrosyl-[protein] + H2O = L-tyrosyl-[protein] + phosphate", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "10684", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/10684" } ] }, { "id": "20629", "name": "", "equation": "O-phospho-L-seryl-[protein] + H2O = L-seryl-[protein] + phosphate", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "20629", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/20629" } ] }, { "id": "47004", "name": "", "equation": "O-phospho-L-threonyl-[protein] + H2O = L-threonyl-[protein] + phosphate", 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"https://www.ebi.ac.uk/interpro/entry/IPR046952", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR42737", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR42737", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR42737:SF6", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR42737:SF6", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00462", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00462", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02852", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02852", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07992", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07992", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QB47", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB47", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QB47-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB47-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R4I6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4I6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R4I6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4I6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L752", "url": "https://www.uniprot.org/uniprotkb/I3L752", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L752-1", "url": "https://www.uniprot.org/uniprotkb/I3L752-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "VEVSPPHGTSPGPGRGATPNRRLGNVRGVSVPSPPGRRARLSAPGTSRSSSAAREELRRRLLGLIEGHRVVIFSKSYCPHSTRVKELFSSLGVECNILELDQVDNGAMHMGGCDRTFQAHQSGLLQKLLQDDPAYDYDLIVIGGGSGGLACAQEAAILGRKVLVLDFVVPSPQGTSWGLGGTCVNVGCIPKKLMHQAALLGQALTDSRKFGWEYSQQVKHNWGTMTEAVQNHIGSLNWGYRLSLREKAVAYINSYGEFEVYFAFFKATNGKGQETCYTAAKFVIATGERPRYLGIQGDKEYCITSDDLFSLPYCPGTTLVVGASYVALECAGFLAGLGLDVTVMVRSVLLRGFDQEMAERVGSYMEQHGVRFLRKFVPVEVQQLEKGSPGKLKVMAKSTEGPETIEGVYNTVLLAIGRDSCTKKMGLEKIGVKINEKSGKIPVNDVEQTNVPYVYAVGDVLEGKPELTPIAVQAGKLLARRLFGGRLEKCDYVNVPTVVFTPLEYGCCGYSEERAIEVYQKENLEVYHTLFWPLEWTVACRDNNTCYAKIICNKLDNDRVIGFHVLGPNAGEIIQGFAAAMKCGLTKQLLDDTIGIHPTCAEVFTTLQITKASGLDVTQKGC", "length": 622, "header": "tr|A0A5G2QB47-1|A0A5G2QB47_PIG Isoform 1 of thioredoxin-disulfide reductase (NADPH) OS=Sus scrofa OX=9823 GN=TXNRD3 PE=3 SV=1 CANONICAL=A0A5G2QB47-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QB47-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB47/entry", "sequence": { "sequence": "VEVSPPHGTSPGPGRGATPNRRLGNVRGVSVPSPPGRRARLSAPGTSRSSSAAREELRRRLLGLIEGHRVVIFSKSYCPHSTRVKELFSSLGVECNILELDQVDNGAMHMGGCDRTFQAHQSGLLQKLLQDDPAYDYDLIVIGGGSGGLACAQEAAILGRKVLVLDFVVPSPQGTSWGLGGTCVNVGCIPKKLMHQAALLGQALTDSRKFGWEYSQQVKHNWGTMTEAVQNHIGSLNWGYRLSLREKAVAYINSYGEFEVYFAFFKATNGKGQETCYTAAKFVIATGERPRYLGIQGDKEYCITSDDLFSLPYCPGTTLVVGASYVALECAGFLAGLGLDVTVMVRSVLLRGFDQEMAERVGSYMEQHGVRFLRKFVPVEVQQLEKGSPGKLKVMAKSTEGPETIEGVYNTVLLAIGRDSCTKKMGLEKIGVKINEKSGKIPVNDVEQTNVPYVYAVGDVLEGKPELTPIAVQAGKLLARRLFGGRLEKCDYVNVPTVVFTPLEYGCCGYSEERAIEVYQKENLEVYHTLFWPLEWTVACRDNNTCYAKIICNKLDNDRVIGFHVLGPNAGEIIQGFAAAMKCGLTKQLLDDTIGIHPTCAEVFTTLQITKASGLDVTQKGC", "length": 622, "header": "tr|A0A5G2QB47-1|A0A5G2QB47_PIG Isoform 1 of thioredoxin-disulfide reductase (NADPH) OS=Sus scrofa OX=9823 GN=TXNRD3 PE=3 SV=1 CANONICAL=A0A5G2QB47-1" }, "locus": { "chromosome": "13", "start_pos": 73336264, "end_pos": 73275911, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081613.1", "url": "https://www.ensembl.org/id/ENSSSCT00000081613.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061268.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061268.1" } ] } }, { "isoform_ac": "A0A5G2R4I6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4I6/entry", "sequence": { "sequence": "MKHRVHRSSLKTSHSVFSLINPQAHQSGLLQKLLQDDPAYDYDLIVIGGGSGGLACAQEAAILGRKVLVLDFVVPSPQGTSWGLGGTCVNVGCIPKKLMHQAALLGQALTDSRKFGWEYSQQVKHNWGTMTEAVQNHIGSLNWGYRLSLREKAVAYINSYGELSNTTKSRSVRSAPRCPFSLCSDDLFSLPYCPGTTLVVGASYVALECAGFLAGLGLDVTVMVRSVLLRGFDQEMAERVGSYMEQHGVRFLRKFVPVEVSPKPAPLALSQCLSTLCFHSPFPELFLCPPSVLLAIGRDSCTKKMGLEKIGVKINEKSGKIPVNDVEQTNVPYVYAVGDVLEGKPELTPIAVQAGKLLARRLFGGRQTSTLMGFLCDYVNVPTVVFTPLEYGCCGYSEERAIEVYQKENLEVYHTLFWPLEWTVACRDNNTCYAKIICNKLDNDRVIGFHVLGPNAGEIIQGFAAAMKCGLTKQLLDDTIGIHPTCAEVGNRITKASGLDVTQKGC", "length": 506, "header": "tr|A0A5G2R4I6-1|A0A5G2QB47_PIG Computationally mapped isoform of thioredoxin-disulfide reductase (NADPH) OS=Sus scrofa OX=9823 GN=TXNRD3 PE=3 SV=2 CANONICAL=A0A5G2QB47-1" }, "locus": { "chromosome": "13", "start_pos": 73336264, "end_pos": 73294563, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091473.2", "url": "https://www.ensembl.org/id/ENSSSCT00000091473.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072118.2", "url": "https://www.ensembl.org/id/ENSSSCP00000072118.2" } ] } }, { "isoform_ac": "I3L752-1", "url": "https://www.uniprot.org/uniprotkb/I3L752/entry", "sequence": { "sequence": "MGNVRGVSVPSPPGRRARLSAPGTSRSSSAAREELRRRLLGLIEGHRVVIFSKSYCPHSTRVGRQGLLGLLVQDCANIFVNKVHMGGCDRTFQAHQSGLLQKLLQDDPAYDYDLIVIGGGSGGLACAQEAAILGRKVLVLDFVVPSPQGTSWGLGGTCVNVGCIPKKLMHQAALLGQALTDSRKFGWEYSQQVKHNWGTMTEAVQNHIGSLNWGYRLSLREKAVAYINSYGEFEVYFAFFKATNGKGQETCYTAAKFVIATGERPRYLGIQGDKEYCITSDDLFSLPYCPGTTLVVGASYVALECAGFLAGLGLDVTVMVRSVLLRGFDQEMAERVGSYMEQHGVRFLRKFVPVEVQQLEKGSPGKLKVMAKSTEGPETIEGVYNTVLLAIGRDSCTKKMGLEKIGVKINEKSGKIPVNDVEQTNVPYVYAVGDVLEGKPELTPIAVQAGKLLARRLFGGRLEKCDYVNVPTVVFTPLEYGCCGYSEERAIEVYQKENLEVYHTLFWPLEWTVACRDNNTCYAKIICNKLDNDRVIGFHVLGPNAGEIIQGFAAAMKCGLTKQLLDDTIGIHPTCAEVFTTLQITKASGLDVTQKGC", "length": 597, "header": "tr|I3L752-1|I3L752_PIG Computationally mapped isoform of thioredoxin-disulfide reductase (NADPH) OS=Sus scrofa OX=9823 GN=TXNRD3 PE=3 SV=5 CANONICAL=A0A5G2QB47-1" }, "locus": { "chromosome": "13", "start_pos": 73336264, "end_pos": 73276354, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027349.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027349.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019856.4", "url": "https://www.ensembl.org/id/ENSSSCP00000019856.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R4I6", "url": 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"https://www.ncbi.nlm.nih.gov/protein/XP_020936570", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QBA9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBA9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QBA9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBA9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MANAPSEIQGVSPKDESTGSESSITSPWCENSIIVDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLSLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASLLQGCSKKRSRTGGNVDNHNSDVAAETRGEDAFSASTNLNVPLIRWPYMSQRISNTTTPTRSGLSSPSSPSFRPPGQIVMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTEGPLSNPQPAAHPWFPMPVATDTSAASLSRPNPQSSSVSEHHPNYH", "length": 402, "header": "tr|A0A5G2QBA9-1|A0A5G2QBA9_PIG Isoform 1 of HSF-type DNA-binding domain-containing protein OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A5G2QBA9-1" }, 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"ENSSSCP00000078394.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078394.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 356, "start_aa": "Thr", "end_pos": 356, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr356", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [], "pathway": [ { "id": "ssc:110257904", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110257904", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": 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"DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBA9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBA9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 101, "end_pos": 103, "annotation": "n_glycosylation_sequon" }, { "start_pos": 199, "end_pos": 201, "annotation": "n_glycosylation_sequon" }, { "start_pos": 261, "end_pos": 263, "annotation": "n_glycosylation_sequon" }, { "start_pos": 352, "end_pos": 354, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QBA9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 402, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QBA9-F1.pdb", 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"database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QBN3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBN3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QBN3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBN3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MATTNNVTELIITGLFQDPEVQRVCFVVFLPVYLATVVGNGLIVLTVKVSQSLHSPMYFFLSYLSLVEISYSSTVAPKFIADLLSKVKTISLEGCVAQIFFFHFFGVAETFLLTVMAYDRYVAICKPLHYTVIMSRAVCHRLVAGSWLGGFFHSMVQIIVTLQLSFCGPNVIDHYFCDLHPLFKLACTDTSVEGLIVLANSGLLSIFSFLVLVSSYIVILVNLRNHSAEGRRKALSTCASHVTVVVLFFGPAIFLYMRPPSTFTEDKLVAVFYTMVTPMLNPIIYTLRNAEVKIAMRRLWGRKVNLGVE", "length": 309, "header": "tr|A0A5G2QBN3-1|A0A5G2QBN3_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN=LOC100523887 PE=3 SV=1 CANONICAL=A0A5G2QBN3-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QBN3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBN3/entry", "sequence": { "sequence": "MATTNNVTELIITGLFQDPEVQRVCFVVFLPVYLATVVGNGLIVLTVKVSQSLHSPMYFFLSYLSLVEISYSSTVAPKFIADLLSKVKTISLEGCVAQIFFFHFFGVAETFLLTVMAYDRYVAICKPLHYTVIMSRAVCHRLVAGSWLGGFFHSMVQIIVTLQLSFCGPNVIDHYFCDLHPLFKLACTDTSVEGLIVLANSGLLSIFSFLVLVSSYIVILVNLRNHSAEGRRKALSTCASHVTVVVLFFGPAIFLYMRPPSTFTEDKLVAVFYTMVTPMLNPIIYTLRNAEVKIAMRRLWGRKVNLGVE", "length": 309, "header": "tr|A0A5G2QBN3-1|A0A5G2QBN3_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN=LOC100523887 PE=3 SV=1 CANONICAL=A0A5G2QBN3-1" }, "locus": { "chromosome": "2", "start_pos": 14407738, "end_pos": 14406812, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089120.1", "url": "https://www.ensembl.org/id/ENSSSCT00000089120.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061908.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061908.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBN3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBN3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100523887", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100523887", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2JZJ2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4b1d", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MANVNVTELIITGLFQDLEVQKVCFVLFLPVYLATVLGNGLIVVTVNISKSLYSPMYFFLSYLSLVEILYSSTVVPKFITDLLHKIKTISLKGCLAQIFFFHFFGVTEILLLTVMAYDRYVAICKPLYYTTIMSRPICHRLVAGSWVGGFFHSIIQIFITIPLPFCGPNIIDHYFCDLHPLFKLACTDTFVVGVIMFVNSGLFSVFSFLFLVSSYIVILYNLRNHSAEGRRKALSTCASHIMVVVLFFGPAIFLYLRPASTYTEDKLVAVFYTVITPMMNPIIYTLRNAEVKNAVRRLWGKKVSSSLE", "length": 308 }, "evidence": [ { "id": "A0A5G2QBN3", "url": "https://omabrowser.org/oma/group/A0A5G2QBN3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3IC62-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100761793", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGSVNNVTELIITGLFRDPDVQKVCFVLFLPVYLATVLGNGLIVVTVNISKSLRSPMYFFLSYLSLVEICYSSTVVPKFISDLLAKVKTISFKGCLAQIFFFHFFGVTEILLLTVMAYDRYVAICKPLYYTTIMSRTVCHHLVAGSWVGGFFHSIIQIFITIPLPFCGPNVIDHYFCDLHPLFKLACTDTFVVGVIMFVNSGLFSVFSFLFLVSSYVVILFNLRNHSAEGRRKALSTCASHIMVVVLFFGPAIFLYLRPASTYTEDKLVAVFYTVITPMLNPIIYTLRNAEVKNAVKKLWGKKASSSLE", "length": 309 }, "evidence": [ { "id": "A0A5G2QBN3", "url": "https://omabrowser.org/oma/group/A0A5G2QBN3/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q7TQZ0-1", "protein_name": "Olfactory receptor", "gene_name": "Or4b1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAFVNVTELIITGLFQDPDVQKVCFVLFLPVYLATVLGNGLIVVTVNISKSLYSPMYFFLNYLSLVEILYSSTVVPKFITDLLNKIKTISPKGCLAQIFFFHFFGVTEILLLTVMAYDRYVAICKPLYYTTIMSRPKCHRLVAGSWVGGFFHSIIQIFITLPLPFCGPNVIDHYFCDLHPLFKLACTDTFVVGVIMFVNSGLFSVFSFLFLVSSYIVILYNLRNHSAEGRRKALSTCASHIMVVVLFFGPAIFLYLRPASTYTEDKLVAVFYTVITPMLNPIIYTLRNAEVKNAVRKLWGKKVSSSLE", "length": 308 }, "evidence": [ { "id": "A0A5G2QBN3", "url": "https://omabrowser.org/oma/group/A0A5G2QBN3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "G protein-coupled receptor activity", "id": "GO:0004930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004930", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBN3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBN3" } ], "pmid": "" }, { "name": "olfactory receptor activity", "id": "GO:0004984", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004984", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBN3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBN3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBN3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBN3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 225, "end_pos": 227, "annotation": "n_glycosylation_sequon" }, { "start_pos": 6, "end_pos": 8, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QBN3-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 309, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QBN3-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QBN3" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QBN3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBN3" }, { "id": "PS50262", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50262" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "G-protein coupled receptors family 1 profile", "eco_id": "ECO_0000259", "start_pos": 39, "end_pos": 285, "start_aa": "Gly", "end_aa": "Tyr", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 225, "end_pos": 227 }, { "start_pos": 6, "end_pos": 8 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QBR5-1", "uniprot_ac": "A0A5G2QBR5", "uniprot_id": "A0A5G2QBR5_PIG", "mass": { "chemical_mass": 66692.0, "monoisotopic_mass": 66692.0 }, "refseq": { "ac": "XP_005656826", "name": "ADP-ribosylation factor-binding protein GGA2 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005656826" }, "gene_names": [ { "name": "GGA2", "type": "recommended", "evidence": [ { "id": "A0A5G2QBR5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBR5" } ] }, { "name": "GGA2", "type": "synonym", "evidence": [ { "id": "XP_005656826", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005656826" } ] } ], "protein_names": [ { "name": "ADP-ribosylation factor-binding protein GGA2 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_005656826", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005656826" } ] }, { "name": "Golgi associated, gamma adaptin ear containing, ARF binding protein 2", "type": "synonym", "evidence": [ { "id": "A0A5G2QBR5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBR5/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBR5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBR5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GGA2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBR5", "locus": { "chromosome": "3", "start_pos": 22736581, "end_pos": 22695765, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000010798", "url": "https://www.ensembl.org/id/ENSSSCG00000010798" } ] } } ], "crossref": [ { "id": "A0A5G2QBR5", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QBR5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000010798", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000010798", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd17010", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd17010", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100524333", "url": "https://www.ncbi.nlm.nih.gov/gene/100524333", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002014", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002014", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004152", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004152", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008152", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008152", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008153", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008153", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008942", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008942", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013041", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013041", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027422", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027422", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038425", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038425", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041198", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041198", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100524333", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524333", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QBR5", "url": "https://www.orthodb.org/?gene=A0A5G2QBR5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F1SAB3", "url": "https://www.orthodb.org/?gene=F1SAB3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR45905", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45905", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45905:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45905:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00790", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00790", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02883", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02883", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03127", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03127", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18308", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18308", "database": "Pfam", "categories": [ "Protein Classification", 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"MAATATAVAAGAGATAGAESAEGPPGPAAALELWLNKATDPSMSEQDWSAIQNFCDQVNTDPNGPTHTPWLLAHKIQSPQEKEALYALTVLEMCVNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWTTEKVKGRIIEILYSWTVWFPEDIKIRDAYQMLKKQGIIKQDPKLPVDKILPPPSPWPKSSIFDADEEKSKLLTRLLKSNHPEDLQAANRLIKNLVKEEQEKSEKVSKRVSAVEEVRSHVKVLQEMLSRYRRPGQAPPDQEALQVVYERCEKLRPTLFRLASDTTDDDDALAEILQANDLLTQGVLLYKQVVEGRVTFGSTAVSSVEDTPVSRGCTKNCPLIDLEGDSGSAQAGVATPSLLHQDLAALGISDAPVTNKAAGQHCCQEEKTPTASTPPGGAVRSPSAERNLLDLLSPQPSPGPLNYIPQKSIPKEVPPGTKSSPGWSWEAGPLASSPSSQNTPLAHVFVPLESVKPSSLPPVIVYDRNGFRILLHFSQTGAPGHPEVQVLLLTMMSTATQPVWDIMFQVAVPKSMRVKLQPASSSKLPAFSPLMPPAVISQMLLLDNPHKEPIRLRYKLTFNQGGQPFSEVGEVKDFPDLAVLGAA", "length": 612, "header": "tr|A0A5G2QBR5-1|A0A5G2QBR5_PIG Isoform 1 of Golgi associated, gamma adaptin ear containing, ARF binding protein 2 OS=Sus scrofa OX=9823 GN=GGA2 PE=3 SV=2 CANONICAL=A0A5G2QBR5-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QBR5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBR5/entry", "sequence": { "sequence": "MAATATAVAAGAGATAGAESAEGPPGPAAALELWLNKATDPSMSEQDWSAIQNFCDQVNTDPNGPTHTPWLLAHKIQSPQEKEALYALTVLEMCVNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWTTEKVKGRIIEILYSWTVWFPEDIKIRDAYQMLKKQGIIKQDPKLPVDKILPPPSPWPKSSIFDADEEKSKLLTRLLKSNHPEDLQAANRLIKNLVKEEQEKSEKVSKRVSAVEEVRSHVKVLQEMLSRYRRPGQAPPDQEALQVVYERCEKLRPTLFRLASDTTDDDDALAEILQANDLLTQGVLLYKQVVEGRVTFGSTAVSSVEDTPVSRGCTKNCPLIDLEGDSGSAQAGVATPSLLHQDLAALGISDAPVTNKAAGQHCCQEEKTPTASTPPGGAVRSPSAERNLLDLLSPQPSPGPLNYIPQKSIPKEVPPGTKSSPGWSWEAGPLASSPSSQNTPLAHVFVPLESVKPSSLPPVIVYDRNGFRILLHFSQTGAPGHPEVQVLLLTMMSTATQPVWDIMFQVAVPKSMRVKLQPASSSKLPAFSPLMPPAVISQMLLLDNPHKEPIRLRYKLTFNQGGQPFSEVGEVKDFPDLAVLGAA", "length": 612, "header": "tr|A0A5G2QBR5-1|A0A5G2QBR5_PIG Isoform 1 of Golgi associated, gamma adaptin ear containing, ARF binding protein 2 OS=Sus scrofa OX=9823 GN=GGA2 PE=3 SV=2 CANONICAL=A0A5G2QBR5-1" }, "locus": { "chromosome": "3", "start_pos": 22733245, "end_pos": 22695822, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000073970.2", "url": "https://www.ensembl.org/id/ENSSSCT00000073970.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061489.2", "url": "https://www.ensembl.org/id/ENSSSCP00000061489.2" } ] } }, { "isoform_ac": "F1SAB3-1", "url": "https://www.uniprot.org/uniprotkb/F1SAB3/entry", "sequence": { "sequence": "MSEQDWSAIQNFCDQVNTDPNGPTHTPWLLAHKIQSPQEKEALYALTVLEMCVNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWTTEKVKGRIIEILYSWTVWFPEDIKIRDAYQMLKKQGIIKQDPKLPVDKILPPPSPWPKSSIFDADEEKSKLLTRLLKSNHPEDLQAANRLIKNLVKEEQEKSEKVSKRVSAVEEVRSHVKVLQEMLSRYRRPGQAPPDQEALQVVYERCEKLRPTLFRLASDTTDDDDALAEILQANDLLTQGVLLYKQVVEGRVTFGSTAVSSVEDTPVSRGCTKNCPLIDLEGDSGSAQAGVATPSLLHQDLAALGISDAPVTNKAAGQHCCQEEKTPTASTPPGGAVRSPSAERNLLDLLSPQPSPGPLNYIPQKSIPKEVPPGTKSSPGWSWEAGPLASSPSSQNTPLAHVFVPLESVKPSSLPPVIVYDRNGFRILLHFSQTGAPGHPEVQVLLLTMMSTATQPVWDIMFQVAVPKSMRVKLQPASSSKLPAFSPLMPPAVISQMLLLDNPHKEPIRLRYKLTFNQGGQPFSEVGEVKDFPDLAVLGAA", "length": 570, "header": "tr|F1SAB3-1|F1SAB3_PIG Computationally mapped isoform of Golgi associated, gamma adaptin ear containing, ARF binding protein 2 OS=Sus scrofa OX=9823 GN=GGA2 PE=3 SV=4 CANONICAL=A0A5G2QBR5-1" }, "locus": { "chromosome": "3", "start_pos": 22733245, "end_pos": 22705827, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011814.4", "url": "https://www.ensembl.org/id/ENSSSCT00000011814.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011511.4", "url": "https://www.ensembl.org/id/ENSSSCP00000011511.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBR5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBR5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100524333", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524333", "resource": "KEGG Pathway" }, { "id": "R-SSC-8854214", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8854214", "resource": "Reactome", "description": "TBC/RABGAPs" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "intracellular protein transport", "id": "GO:0006886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006886", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBR5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBR5" } ], "pmid": "" }, { "name": "Golgi to plasma membrane protein transport", "id": "GO:0043001", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043001", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBR5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBR5" } ], "pmid": "" }, { "name": "protein localization to cell surface", "id": "GO:0034394", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034394", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBR5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBR5" } ], "pmid": "" }, { "name": "Golgi to plasma membrane transport", "id": "GO:0006893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006893", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBR5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBR5" } ], "pmid": "" }, { "name": "protein localization to cell periphery", "id": "GO:1990778", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990778", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBR5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBR5" } ], "pmid": "" }, { "name": "protein localization to membrane", "id": "GO:0072657", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072657", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBR5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBR5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "early endosome membrane", "id": "GO:0031901", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031901", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBR5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBR5" } ], "pmid": "" }, { "name": "clathrin-coated vesicle", "id": "GO:0030136", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030136", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBR5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBR5" } ], "pmid": "" }, { 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"url": "https://www.ebi.ac.uk/interpro/entry/IPR002075", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005637", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005637", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009060", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009060", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012677", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012677", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015245", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015245", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018222", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018222", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR030217", "url": "https://www.ebi.ac.uk/interpro/entry/IPR030217", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032710", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032710", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035979", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035979", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057125", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057125", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "YGGHEAW", "url": "https://omabrowser.org/oma/group/YGGHEAW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR10662", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10662", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10662:SF27", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10662:SF27", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03943", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03943", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF09162", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09162", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22602", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22602", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24048", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24048", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-159227", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-159227", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-159230", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-159230", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-159231", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-159231", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-159236", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-159236", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QBS5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBS5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QBS5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBS5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LNX4", "url": "https://www.uniprot.org/uniprotkb/I3LNX4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LNX4-1", "url": "https://www.uniprot.org/uniprotkb/I3LNX4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKAGGRRTRGNSASQAQVLGGACNAKSRPRLVRSSNAHARLPVVPPITVGRRLRATRWPHKCGGIRRRSTSAGRAWAFGRLPVSRAATEPAPARCAMADEGKSYNEHDDRVSFPQRRKKGRGPFRWKCGEGNRRSARGGSSIRSSRLEEDDRDVAVSDAQDVPRLRYNPYAPRPNRRGDGWHERSRIHVTVPLRRDRVPPERGGAGTSQDGTSKNWFKITIPYGRKYDKSWLLGMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILDRENRRISIIINSSPPPHTVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRTDPDLVAQNIDVVLNRRSCMAAALRIIEENIPELLSLNLSNNKLYRLDDLSNIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNTLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIAFDVEAPTMLPPCKGSYFGTETLKNLVLHFLQQYYAVYDSGDRQRLLDAYHDGACCSLSIPFIPQNPARSNLAEYFKDSRNVKKLKDPSLRFRLLKHTRLNVVAFLNELPKTQHDINSFVVDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPGSNSGLCIVNDELFVRNASPDEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTHLKVREWVAKRDLQAFKRVK", "length": 721, "header": "tr|A0A5G2QBS5-1|A0A5G2QBS5_PIG Isoform 1 of Nuclear RNA export factor 1 OS=Sus scrofa OX=9823 GN=NXF1 PE=1 SV=1 CANONICAL=A0A5G2QBS5-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QBS5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBS5/entry", "sequence": { "sequence": "MKAGGRRTRGNSASQAQVLGGACNAKSRPRLVRSSNAHARLPVVPPITVGRRLRATRWPHKCGGIRRRSTSAGRAWAFGRLPVSRAATEPAPARCAMADEGKSYNEHDDRVSFPQRRKKGRGPFRWKCGEGNRRSARGGSSIRSSRLEEDDRDVAVSDAQDVPRLRYNPYAPRPNRRGDGWHERSRIHVTVPLRRDRVPPERGGAGTSQDGTSKNWFKITIPYGRKYDKSWLLGMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILDRENRRISIIINSSPPPHTVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRTDPDLVAQNIDVVLNRRSCMAAALRIIEENIPELLSLNLSNNKLYRLDDLSNIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNTLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIAFDVEAPTMLPPCKGSYFGTETLKNLVLHFLQQYYAVYDSGDRQRLLDAYHDGACCSLSIPFIPQNPARSNLAEYFKDSRNVKKLKDPSLRFRLLKHTRLNVVAFLNELPKTQHDINSFVVDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPGSNSGLCIVNDELFVRNASPDEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTHLKVREWVAKRDLQAFKRVK", "length": 721, "header": "tr|A0A5G2QBS5-1|A0A5G2QBS5_PIG Isoform 1 of Nuclear RNA export factor 1 OS=Sus scrofa OX=9823 GN=NXF1 PE=1 SV=1 CANONICAL=A0A5G2QBS5-1" }, "locus": { "chromosome": "2", "start_pos": 8981587, "end_pos": 8969780, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080600.2", "url": "https://www.ensembl.org/id/ENSSSCT00000080600.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060958.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060958.1" } ] } }, { "isoform_ac": "I3LNX4-1", "url": "https://www.uniprot.org/uniprotkb/I3LNX4/entry", "sequence": { "sequence": "MKAGGRRTRGNSASQAQVLGGACNAKSRPRLVRSSNAHARLPVVPPITVGRRLRATRWPHKCGGIRRRSTSAGRAWAFGRLPVSRAATEPAPARCAMADEGKSYNEHDDRVSFPQRRKKGRGPFRWKCGEGNRRSARGGSSIRSSRLEEDDRDVAVSDAQDVPRLRYNPYAPRPNRRGDGWHERSRIHVTVPLRRDRVPPERGGAGTSQDGTSKNWFKITIPYGRKYDKSWLLGMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILDRENRRISIIINSSPPPHTVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRTDPDLVAQNIDVVLNRRSCMAAALRIIEENIPELLSLNLSNNKLYRLDDLSNIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNTLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIAFDVEAPTMLPPCKGSYFGTETLKNLVLHFLQQYYAVYDSGDRQRLLDAYHDGACCSLSIPFIPQNPARSNLAEYFKDSRNVKKLKDPSLRFRLLKHTRLNVVAFLNELPKTQHDINSFVVDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPGSNSGLCIVNDELFVRNASPDEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTHLKAKGEIPEVAFIK", "length": 716, "header": "tr|I3LNX4-1|A0A5G2QBS5_PIG Computationally mapped isoform of Nuclear RNA export factor 1 OS=Sus scrofa OX=9823 GN=NXF1 PE=1 SV=2 CANONICAL=A0A5G2QBS5-1" }, "locus": { "chromosome": "2", "start_pos": 8981682, "end_pos": 8969780, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029108.4", "url": "https://www.ensembl.org/id/ENSSSCT00000029108.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000025799.2", "url": "https://www.ensembl.org/id/ENSSSCP00000025799.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 651, "start_aa": "Thr", "end_pos": 651, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr651", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LNX4", "url": "https://www.uniprot.org/uniprotkb/I3LNX4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-159227", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-159227", "resource": "Reactome", "description": "Transport of the SLBP independent Mature mRNA" }, { "id": "R-SSC-159230", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-159230", "resource": "Reactome", "description": "Transport of the SLBP Dependant Mature mRNA" }, { "id": "R-SSC-159231", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-159231", "resource": "Reactome", "description": "Transport of Mature mRNA Derived from an Intronless Transcript" }, { "id": "R-SSC-159236", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-159236", "resource": "Reactome", "description": "Transport of Mature mRNA derived from an Intron-Containing Transcript" } ], "orthologs": [ { "uniprot_canonical_ac": "O88984-1", "protein_name": "Nuclear RNA export factor 1", "gene_name": "Nxf1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADEGKSYNEHDDRVSFPQRRKKGRGPFRWKCGVGNRRSGRGGSGIRSSRFEEDDGDVAMNDPQDGPRVRFNPYTTRPNRRRDTWHDRDRIHVTVRRDRAPQERGGAGTSQDGTTKNWFKITIPYGKKYDKMWLLSMIQSKCSVPFNPIEFHYENTRAHFFVENATTASALKAVNYKIQDRENGRISIIINSSAPPYIVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRGCMAAALRIIEENIPELLSLNLSNNRLYKLDDMSSIVQKAPNLKILNLSGNELKSEWELDKIKGLKLEELWLDRNPMCDTFLDQSTYISTIRERFPKLLRLDGHELPPPIAFDVEAPTMLPPCKGSYFGTENLKSLVLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSTPSNPQNPVRHNLAKYFNDSRNVKKIKDTTTRFRLLKHTRLNVVAFLNELPKTHHDVNSFVVDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFIAVPASNSGLCIVNDELFVRNASPEEIQRAFAMPAPTPSSSPVPTLSQEQQDMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTHLKAKGEIPEVAFMK", "length": 618 }, "evidence": [ { "id": "A0A5G2QBS5", "url": "https://omabrowser.org/oma/group/A0A5G2QBS5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q1RMS5-1", "protein_name": "Nuclear RNA export factor 1", "gene_name": "NXF1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MADEGKSYNEHDDRVSFPQRRKKGRGPFRWKSGEGNRRSGRGGSSVRSSRLEDDDRDVAMSDVQDAPRVRYTPYAARPNRRGDNWNERTRIHVTLPLRRDRSAAERGGAGTSQDGTSKNWFKITIPYGRKYDKSWLLNVIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILDRENRRISIIINSSSPPHSVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNKLYRLDDLSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNTLCDTFRDQSTYISAVRERFPKLLRLDGHELPPPIAFDVEAPTTLPPCKGSYFGTETLKNLVLHFLQQYYAVYDSGDRQRLLDAYHDGACCSLSIPFTPQNPARSNLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDINSFVVDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPASNSGLCIVNDELFVRNASADEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTHLKAKGEIPEVAFMK", "length": 620 }, "evidence": [ { "id": "A0A5G2QBS5", "url": "https://omabrowser.org/oma/group/A0A5G2QBS5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q99257-1", "protein_name": "mRNA export factor MEX67", "gene_name": "MEX67", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSGFHNVGNINMMAQQQMQQNRIKISVRNWQNATMNDLINFISRNARVAVYDAHVEGPLVIGYVNSKAEAESLMKWNGVRFAGSNLKFELLDNNGASAGTSDTISFLRGVLLKRYDPQTKLLNLGALHSDPELIQKGVFSSISTQSKMFPAMMKLASTEKSLIVESVNLADNQLKDISAISTLAQTFPNLKNLCLANNQIFRFRSLEVWKNKFKDLRELLMTNNPITTDKLYRTEMLRLFPKLVVLDNVIVRDEQKLQTVYSLPMKIQQFFFENDALGQSSTDFATNFLNLWDNNREQLLNLYSPQSQFSVSVDSTIPPSTVTDSDQTPAFGYYMSSSRNISKVSSEKSIQQRLSIGQESINSIFKTLPKTKHHLQEQPNEYSMETISYPQINGFVITLHGFFEETGKPELESNKKTGKNNYQKNRRYNHGYNSTSNNKLSKKSFDRTWVIVPMNNSVIIASDLLTVRAYSTGAWKTASIAIAQPPQQQASVLPQVASMNPNITTPPQPQPSVVPGGMSIPGAPQGAMVMAPTLQLPPDVQSRLNPVQLELLNKLHLETKLNAEYTFMLAEQSNWNYEVAIKGFQSSMNGIPREAFVQF", "length": 599 }, "evidence": [ { "id": "A0A5G2QBS5", "url": "https://omabrowser.org/oma/group/A0A5G2QBS5/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q99JX7-1", "protein_name": "Nuclear RNA export factor 1", "gene_name": "Nxf1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADEGKSYNEHDDRVSFPQRRKKGRGPFRWKCGEGNRRSGRGGSGVQSSRFEEDDGDVAMNDPQDGPRVRYNPYTNRPNRRGDGWHDRDRIHITVRRDRAPAERGGAGTSQDGTTKNWFKITIPYGRKYDKTWLLSMIQSKCSVPFNPIEFHYENTRAHFFVEDATTASALKGVNHKIQDRENRRISIIINASAPPYTVQNELKPEQIEQLKLIMSKRYDGNQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSSNRLYKLDDMSSIVQKAPNLKTLNLSGNELKTERELDKIKGLKLEELWLDRNPMCDNFGDQSSYISAIRERFPKLLRLDGHELPPPISFDVEAPTMLPPCKGSYFGTENLKSLVLRFLQQYYVIYDSGDRQGLLYAYHDGACCSLSIPYNPQNPVRKNLAEYVKDSRNVKKLKEPTQRFRLLKHTRLNVVAFLNELPKTQHDVNAFVVDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFIAVPASNSGLCIVNDELFVRNASPEEIQRAFAMSAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTLLKAKGEIPEVAFMK", "length": 618 }, "evidence": [ { "id": "A0A5G2QBS5", "url": "https://omabrowser.org/oma/group/A0A5G2QBS5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9U1H9-1", "protein_name": "Nuclear RNA export factor 1", "gene_name": "sbr", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MPKRGGGSSQRYNNNVGNGGGRYNAPEDFDDFDVEDRQRRKDRNKRRVSFKPSQCLHNKKDIKLRPEDLRRWDEDDDMSDMTTAVKDRPTSRRRGSPIPRGKFGKLMPNSFGWYQVTLQNAQIYEKETLLSALLAAMSPHVFIPQYWRVERNCVIFFTDDYEAAERIQHLGKNGHLPDGYRLMPRVRSGIPLVAIDDAFKEKMKVTMAKRYNIQTKALDLSRFHADPDLKQVFCPLFRQNVMGAAIDIMCDNIPDLEALNLNDNSISSMEAFKGVEKRLPNLKILYLGDNKIPSLAHLVVLRNLSILELVLKNNPCRSRYKDSQQFISEVRRKFPKLVKLDGETLEPQITFDLSEQGRLLETKASYLCDVAGAEVVRQFLDQYFRIFDSGNRQALLDAYHEKAMLSISMPSASQAGRLNSFWKFNRNLRRLLNGEENRTRNLKYGRLACVSTLDEWPKTQHDRRTFTVDLTIYNTSMMVFTVTGLFKELNDETNNPASMELYDVRHFARTYVVVPQNNGFCIRNETIFITNATHEQVREFKRSQHQPAPGAMPSTSSAVTSPQAGAAAGLQGRLNALGVATGPVAILSGDPLAATAPVNSGSAAISTTAVAPGAQDESTKMQMIEAMSAQSQMNVIWSRKCLEETNWDFNHAAFVFEKLFKENKIPPEAFMK", "length": 672 }, "evidence": [ { "id": "A0A5G2QBS5", "url": "https://omabrowser.org/oma/group/A0A5G2QBS5/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9UBU9-1", "protein_name": "Nuclear RNA export factor 1", "gene_name": "NXF1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MADEGKSYSEHDDERVNFPQRKKKGRGPFRWKYGEGNRRSGRGGSGIRSSRLEEDDGDVAMSDAQDGPRVRYNPYTTRPNRRGDTWHDRDRIHVTVRRDRAPPERGGAGTSQDGTSKNWFKITIPYGRKYDKAWLLSMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIAFDVEAPTTLPPCKGSYFGTENLKSLVLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSIPFIPQNPARSSLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDVNSFVVDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFIAVPASNSGLCIVNDELFVRNASSEEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTHLKAKGEIPEVAFMK", "length": 619 }, "evidence": [ { "id": "A0A5G2QBS5", "url": "https://omabrowser.org/oma/group/A0A5G2QBS5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "poly(A)+ mRNA export from nucleus", "id": "GO:0016973", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016973", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBS5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBS5" } ], "pmid": "" }, { "name": "mRNA export from nucleus", "id": "GO:0006406", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006406", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBS5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBS5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBS5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBS5" } ], "pmid": "" }, { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBS5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBS5" } ], "pmid": "" } ] }, { "name": 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Classification" ] }, { "id": "IPR000725", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000725", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047132", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047132", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100512033", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512033", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NHTAITF", "url": "https://omabrowser.org/oma/group/NHTAITF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QBT1", "url": "https://www.orthodb.org/?gene=A0A5G2QBT1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR26454", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR26454", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR26454:SF77", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR26454:SF77", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13853", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13853", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013839577", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013839577", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QBT1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBT1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QBT1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBT1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRNHTVITTFILLGLTEDPKLQVLLCAFLLLTYMLSVAGNLIIITLTLSDPHLKTPMYFFLRNFSFLEVSFTTVCIPRFLYTMTTGDNTVSYNACATQLFFVVLFGATEFFLLAAMSYDRYVAICKPLHYTTIMNNRVCTTLVLCCWFAGLLIILPPLGVGLQLEFCDSNEIDHFGCDTSPVLQITCSDTVLIERIVLSFAVLTLLITLVCVVLSYTCIIKTILRFPAAQQRKKAFSTCSSHMIVVSITYGSCIFIYIKPSAKEGVAINKGVSVLTTSVAPLLNPFIYTLRNKQVKDAFKGTVKRMVFLTKK", "length": 312, "header": "tr|A0A5G2QBT1-1|A0A5G2QBT1_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN=LOC100512033 PE=3 SV=2 CANONICAL=A0A5G2QBT1-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QBT1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBT1/entry", "sequence": { "sequence": "MRNHTVITTFILLGLTEDPKLQVLLCAFLLLTYMLSVAGNLIIITLTLSDPHLKTPMYFFLRNFSFLEVSFTTVCIPRFLYTMTTGDNTVSYNACATQLFFVVLFGATEFFLLAAMSYDRYVAICKPLHYTTIMNNRVCTTLVLCCWFAGLLIILPPLGVGLQLEFCDSNEIDHFGCDTSPVLQITCSDTVLIERIVLSFAVLTLLITLVCVVLSYTCIIKTILRFPAAQQRKKAFSTCSSHMIVVSITYGSCIFIYIKPSAKEGVAINKGVSVLTTSVAPLLNPFIYTLRNKQVKDAFKGTVKRMVFLTKK", "length": 312, "header": "tr|A0A5G2QBT1-1|A0A5G2QBT1_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN=LOC100512033 PE=3 SV=2 CANONICAL=A0A5G2QBT1-1" }, "locus": { "chromosome": "5", "start_pos": 21000610, "end_pos": 20999675, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080070.2", "url": "https://www.ensembl.org/id/ENSSSCT00000080070.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061504.2", "url": "https://www.ensembl.org/id/ENSSSCP00000061504.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBT1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBT1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100512033", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512033", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6A155-1", "protein_name": "Olfactory receptor", "gene_name": "Or6c2b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"https://www.ebi.ac.uk/interpro/entry/IPR009170", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044414", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044414", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046341", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046341", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050331", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050331", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PRKGNWL", "url": "https://omabrowser.org/oma/group/PRKGNWL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR16515", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16515", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16515:SF37", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16515:SF37", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13912", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13912", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21549", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21549", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QC15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC15", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QC15-1", "url": 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"MNQNAAEPVAAAETLAEVPEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVGDKKKRSQVKNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNWACSGRPIAPGEELLVWYNGEDNPEIAAAIEEERASARSKRSSPKSRKGKKKSQENKNKANKTEDTQLKTSEPDSSSANMRDSAEGPQDEDEKPSASAVEQPAVPQEAGSQDVLPEREVPAPACEPQTGPEAELEATRCEANDVEEEEEEEEEEEEELEDEGDTVADVPNESSPKEPEIRCDEKPEDLLEEPKALLKETPEASPEVTPVSTVPRAKEEANGDVFETFLFPCQHCERKFTTKQGLERHTHIHLSTVNHAFKCKYCGKAFGTQINRRRHERRHEAGLKRKPSLTPPQPEDPADGLALGDAAAPREDAPPPALGQDCLALHSEKASQETVRSSVAEENGDVKELHPCKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLLEEPRPAGQAPPAQSVYVPSTEPEEEGEADDVYIMDISSNISENLNYYIDGKIPTSSSTSNCDVIEMESGPADVYGINCLLAPVTVEITQNIKTTQAPVTDDLPKEPSSSTNSESKKRRTTSPPVLPKIKAEAESEPVAASCSLSLPLSIATTEAVSFHKEKNVYLSSKLKQLLQTQEKLTPPAGISAAEIPKLGPVCVSAPASMLPVTSSRFKRRTSSPPSSPQHSPALRDFGKPGDGKATWTEAVLSSKKPKLESHSNSPAWSLSGRDERETGSPPGFDDYKVPKEWAASSSFSNVCNQQPLDLSSGVKQKAEGTGKMPVQWESVLDLSVHKKPCSDSEGKEFKENHLVQPACNAAKKKKPTTCMLQKVLLNEYNGVDLPVENAPDVTRSPSPCKPPDPHPDPDLLGPDSGLSAPAAESPPEVSPRSPAPQTSSLSSGQLPPLLTPTNPSSPPPCPPVLTVATPPPPLLPTLPLPAASSGTSPHACPSPLSNAAAQSPLPILSPTVSPSPSPIPSVEPLPSAASPGPPTLSSSSSSSSSSSFSSSSSSSSPSPPPLSAVSSVVSSGDNLEASLPMISFKQEELENEDLKAREEAQAAAERAVVQETFNKNFVCNVCESPFLSIKDLTKHLSVHAEDWPFKCEFCVQLFKAKTDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDEACTHHEFESGTLRPQNFTDPSKARAEHMQGLPEDPLETSKEEEELNDSSEELYTTIKIMASGIKTKDPDVRLGLNQHYPSFKPPPFQYHHRSPLGIGVTATNFTTHNIPQTFTTAIRCTKCGKGVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGVVVLDNAGKNAFRRMGQPKRLNFSVELSKMSSNKLKLNALKKKNQLVQKAILQKNKSAKQKADLKHAPEAASHICPYCSREFTYIGSLNKHAAFSCPKKPLSPSKKKVSHSSKKGGHPSPAGSDKSSSSSSHRRRTADAEIKMQSVQAPLGKTRARSSGPTSLPPPASSFRSKQNVKFAASVKSKKPSSSLRNSSPIRMAKVTHSEAKKPKAAAKNHAAQLSGKTSRSLHVRAQKSRAVLQSKSALASKKRTDRFNVKSRERSGGPITRSLQLAAAADPSESRREDSGGKQELKDLSYSLRLASRCPPPAASYITRQCRNVKATAAAQFQGSLFKE", "length": 1690, "header": "tr|A0A5G2QC15-1|A0A5G2QC15_PIG Isoform 1 of PR/SET domain 2 OS=Sus scrofa OX=9823 GN=PRDM2 PE=4 SV=1 CANONICAL=A0A5G2QC15-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QC15-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC15/entry", "sequence": { "sequence": "MNQNAAEPVAAAETLAEVPEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVGDKKKRSQVKNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNWACSGRPIAPGEELLVWYNGEDNPEIAAAIEEERASARSKRSSPKSRKGKKKSQENKNKANKTEDTQLKTSEPDSSSANMRDSAEGPQDEDEKPSASAVEQPAVPQEAGSQDVLPEREVPAPACEPQTGPEAELEATRCEANDVEEEEEEEEEEEEELEDEGDTVADVPNESSPKEPEIRCDEKPEDLLEEPKALLKETPEASPEVTPVSTVPRAKEEANGDVFETFLFPCQHCERKFTTKQGLERHTHIHLSTVNHAFKCKYCGKAFGTQINRRRHERRHEAGLKRKPSLTPPQPEDPADGLALGDAAAPREDAPPPALGQDCLALHSEKASQETVRSSVAEENGDVKELHPCKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLLEEPRPAGQAPPAQSVYVPSTEPEEEGEADDVYIMDISSNISENLNYYIDGKIPTSSSTSNCDVIEMESGPADVYGINCLLAPVTVEITQNIKTTQAPVTDDLPKEPSSSTNSESKKRRTTSPPVLPKIKAEAESEPVAASCSLSLPLSIATTEAVSFHKEKNVYLSSKLKQLLQTQEKLTPPAGISAAEIPKLGPVCVSAPASMLPVTSSRFKRRTSSPPSSPQHSPALRDFGKPGDGKATWTEAVLSSKKPKLESHSNSPAWSLSGRDERETGSPPGFDDYKVPKEWAASSSFSNVCNQQPLDLSSGVKQKAEGTGKMPVQWESVLDLSVHKKPCSDSEGKEFKENHLVQPACNAAKKKKPTTCMLQKVLLNEYNGVDLPVENAPDVTRSPSPCKPPDPHPDPDLLGPDSGLSAPAAESPPEVSPRSPAPQTSSLSSGQLPPLLTPTNPSSPPPCPPVLTVATPPPPLLPTLPLPAASSGTSPHACPSPLSNAAAQSPLPILSPTVSPSPSPIPSVEPLPSAASPGPPTLSSSSSSSSSSSFSSSSSSSSPSPPPLSAVSSVVSSGDNLEASLPMISFKQEELENEDLKAREEAQAAAERAVVQETFNKNFVCNVCESPFLSIKDLTKHLSVHAEDWPFKCEFCVQLFKAKTDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDEACTHHEFESGTLRPQNFTDPSKARAEHMQGLPEDPLETSKEEEELNDSSEELYTTIKIMASGIKTKDPDVRLGLNQHYPSFKPPPFQYHHRSPLGIGVTATNFTTHNIPQTFTTAIRCTKCGKGVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGVVVLDNAGKNAFRRMGQPKRLNFSVELSKMSSNKLKLNALKKKNQLVQKAILQKNKSAKQKADLKHAPEAASHICPYCSREFTYIGSLNKHAAFSCPKKPLSPSKKKVSHSSKKGGHPSPAGSDKSSSSSSHRRRTADAEIKMQSVQAPLGKTRARSSGPTSLPPPASSFRSKQNVKFAASVKSKKPSSSLRNSSPIRMAKVTHSEAKKPKAAAKNHAAQLSGKTSRSLHVRAQKSRAVLQSKSALASKKRTDRFNVKSRERSGGPITRSLQLAAAADPSESRREDSGGKQELKDLSYSLRLASRCPPPAASYITRQCRNVKATAAAQFQGSLFKE", "length": 1690, "header": "tr|A0A5G2QC15-1|A0A5G2QC15_PIG Isoform 1 of PR/SET domain 2 OS=Sus scrofa OX=9823 GN=PRDM2 PE=4 SV=1 CANONICAL=A0A5G2QC15-1" }, "locus": { "chromosome": "6", "start_pos": 73232786, "end_pos": 73137757, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076815.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076815.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061064.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061064.1" } ] } }, { "isoform_ac": "F1SUX9-1", "url": "https://www.uniprot.org/uniprotkb/F1SUX9/entry", "sequence": { "sequence": "MNQNAAEPVAAAETLAEVPEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVGDKKKRSQVKNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLEINRAIYYKTLKPIAPGEELLVWYNGEDNPEIAAAIEEERASARSKRSSPKSRKGKKKSQENKNKANKTEDTQLKTSEPDSSSANMRDSAEATVSAWRPGVLRQRPRTSPGSVGMSRPQRQPSSRDPSSKSRCFTCSLTAPEVTWNQ", "length": 263, "header": "tr|F1SUX9-1|A0A5G2QC15_PIG Computationally mapped isoform of PR/SET domain 2 OS=Sus scrofa OX=9823 GN=PRDM2 PE=4 SV=2 CANONICAL=A0A5G2QC15-1" }, "locus": { "chromosome": "6", "start_pos": 73238285, "end_pos": 73137757, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000003834.4", "url": "https://www.ensembl.org/id/ENSSSCT00000003834.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000003746.2", "url": "https://www.ensembl.org/id/ENSSSCP00000003746.2" } ] } }, { "isoform_ac": "I3LQ78-1", "url": "https://www.uniprot.org/uniprotkb/I3LQ78/entry", "sequence": { "sequence": "MNQNAAEPVAAAETLAEVPEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVGDKKKRSQVKNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNWACSGRPIAPGEELLVWYNGEDNPEIAAAIEEERASARSKRSSPKSRKGKKKSQENKNKANKTEDTQLKTSEPDSSSANMRDSAEGPQDEDEKPSASAVEQPAVPQEAGSQDVLPEREVPAPACEPQTGPEAELEATRCEANDVEEEEEEEEEEEEELEDEGDTVADVPNESSPKEPEIRCDEKPEDLLEEPKALLKETPEASPEVTPVSTVPRAKEEANGDVFETFLFPCQHCERKFTTKQGLERHTHIHLSTVNHAFKCKYCGKAFGTQINRRRHERRHEAGLKRKPSLTPPQPEDPADGLALGDAAAPREDAPPPALGQDCLALHSEKASQETVRSSVAEENGDVKELHPCKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLLEEPRPAGQAPPAQSVYVPSTEPEEEGEADDVYIMDISSNISENLNYYIDGKIPTSSSTSNCDVIEMESGPADVYGINCLLAPVTVEITQNIKTTQAPVTDDLPKEPSSSTNSESKKRRTTSPPVLPKIKAEAESEPVAASCSLSLPLSIATTEAVSFHKEKNVYLSSKLKQLLQTQEKLTPPAGISAAEIPKLGPVCVSAPASMLPVTSSRFKRRTSSPPSSPQHSPALRDFGKPGDGKATWTEAVLSSKKPKLESHSNSPAWSLSGRDERETGSPPGFDDYKVPKEWAASSSFSNVCNQQPLDLSSGVKQKAEGTGKMPVQWESVLDLSVHKKPCSDSEGKEFKENHLVQPACNAAKKKKPTTCMLQKVLLNEYNGVDLPVENAPDVTRSPSPCKPPDPHPDPDLLGPDSGLSAPAAESPPEVSPRSPAPQTSSLSSGQLPPLLTPTNPSSPPPCPPVLTVATPPPPLLPTLPLPAASSGTSPHACPSPLSNAAAQSPLPILSPTVSPSPSPIPSVEPLPSAASPGPPTLSSSSSSSSSSSFSSSSSSSSPSPPPLSAVSSVVSSGDNLEASLPMISFKQEELENEDLKAREEAQAAAERAVVQETFNKNFVCNVCESPFLSIKDLTKHLSVHAEDWPFKCEFCVQLFKAKTDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDEACTHHEFESGTLRPQNFTDPSKARAEHMQGLPEDPLETSKEEEELNDSSEELYTTIKIMASGIKTKDPDVRLGLNQHYPSFKPPPFQYHHRSPLGIGVTATNFTTHNIPQTFTTAIRCTKCGKGVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGVVVLDNAGKNAFRRMGQPKRLNFSVELSKMSSNKLKLNALKKKNQLVQKAILQKNKSAKQKADLKHAPEAASHICPYCSREFTYIGSLNKHAAFSCPKKPLSPSKKKVSHSSKKGGHPSPAGSDKSSSSSSHRRRTADAEIKMQSVQAPLGKTRARSSGPTSLPPPASSFRSKQNVKFAASVKSKKPSSSLRNSSPIRMAKVTHSEAKKPKAAAKNHAAQLSGKTSRSLHVRAQKSRAVLQSKSALASKKRTDRFNVKSRERSGGPITRSLQLAAAADPSESRREDSGGKQELKDLRNFL", "length": 1654, "header": "tr|I3LQ78-1|A0A5G2QC15_PIG Computationally mapped isoform of PR/SET domain 2 OS=Sus scrofa OX=9823 GN=PRDM2 PE=4 SV=3 CANONICAL=A0A5G2QC15-1" }, "locus": { "chromosome": "6", "start_pos": 73209747, "end_pos": 73137757, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025946.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025946.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000026256.3", "url": "https://www.ensembl.org/id/ENSSSCP00000026256.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SUX9", "url": "https://www.uniprot.org/uniprotkb/F1SUX9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QC15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC15" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QC15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC15" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QC15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC15" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QC15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC15" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 6, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QC15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC15" } ], "pmid": "" }, { "name": "RNA polymerase II transcription regulatory region sequence-specific DNA binding", "id": "GO:0000977", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000977", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QC15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC15" } ], "pmid": "" }, { "name": "DNA-binding transcription repressor activity, RNA polymerase II-specific", "id": "GO:0001227", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001227", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QC15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC15" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QC15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC15" } ], "pmid": "" }, { "name": "histone methyltransferase activity", "id": "GO:0042054", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042054", 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"https://www.uniprot.org/uniprotkb/A0A5G2QC89/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Plays an important role in centriole assembly and/or stability and ciliogenesis. Involved in early steps of centriole duplication, as well as in the later steps of centriole length control. Acts in concert with POC1B to ensure centriole integrity and proper mitotic spindle formation.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QC89", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC89#function" }, { "database": "UniProtKB", "id": "ARBA00059838", "url": "https://www.uniprot.org/uniprotkb/ARBA00059838#function" }, { "database": "UniProtKB", "id": "F1SIZ2", "url": "https://www.uniprot.org/uniprotkb/F1SIZ2#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QC89", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC89" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "POC1A", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC89", "locus": { "chromosome": "13", "start_pos": 34227457, "end_pos": 34308083, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011426", "url": "https://www.ensembl.org/id/ENSSSCG00000011426" } ] } } ], "crossref": [ { "id": "A0A5G2QC89", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QC89", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000011426", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011426", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00200", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00200", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100521113", "url": "https://www.ncbi.nlm.nih.gov/gene/100521113", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001680", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001680", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015943", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015943", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019775", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019775", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020472", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020472", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036322", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036322", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050505", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050505", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100521113", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521113", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LMIWHFK", "url": "https://omabrowser.org/oma/group/LMIWHFK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QC89", "url": "https://www.orthodb.org/?gene=A0A5G2QC89", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR44019", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44019", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44019:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44019:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00400", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00400", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020924536", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020924536", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QC89", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC89", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QC89-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC89-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SIZ2", "url": "https://www.uniprot.org/uniprotkb/F1SIZ2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SIZ2-1", "url": "https://www.uniprot.org/uniprotkb/F1SIZ2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASPYPEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDVIDYGEVLRVQRPPATLASSSGTLPEVDFAIPPGRGRSQELMQSQPQEPVSMPQTLTSTLEHIVGQLDVLTQTVSILEQRLTLTEDKLKQCLENQQLIMQRTTP", "length": 407, "header": "tr|A0A5G2QC89-1|A0A5G2QC89_PIG Isoform 1 of POC1 centriolar protein homolog A OS=Sus scrofa OX=9823 GN=POC1A PE=3 SV=1 CANONICAL=A0A5G2QC89-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QC89-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC89/entry", "sequence": { "sequence": "MASPYPEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDVIDYGEVLRVQRPPATLASSSGTLPEVDFAIPPGRGRSQELMQSQPQEPVSMPQTLTSTLEHIVGQLDVLTQTVSILEQRLTLTEDKLKQCLENQQLIMQRTTP", "length": 407, "header": "tr|A0A5G2QC89-1|A0A5G2QC89_PIG Isoform 1 of POC1 centriolar protein homolog A OS=Sus scrofa OX=9823 GN=POC1A PE=3 SV=1 CANONICAL=A0A5G2QC89-1" }, "locus": { "chromosome": "13", "start_pos": 34307718, "end_pos": 34228461, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079125.2", "url": "https://www.ensembl.org/id/ENSSSCT00000079125.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061144.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061144.1" } ] } }, { "isoform_ac": "F1SIZ2-1", "url": "https://www.uniprot.org/uniprotkb/F1SIZ2/entry", "sequence": { "sequence": "MASPYPEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDVIDYGEVLRVQRPPATLASSSGTLTVSILEQRLTLTEDKLKQCLENQQLIMQRTTP", "length": 359, "header": "tr|F1SIZ2-1|A0A5G2QC89_PIG Computationally mapped isoform of POC1 centriolar protein homolog A OS=Sus scrofa OX=9823 GN=POC1A PE=3 SV=4 CANONICAL=A0A5G2QC89-1" }, "locus": { "chromosome": "13", "start_pos": 34307718, "end_pos": 34228461, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012506.4", "url": "https://www.ensembl.org/id/ENSSSCT00000012506.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012178.4", "url": "https://www.ensembl.org/id/ENSSSCP00000012178.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SIZ2", "url": "https://www.uniprot.org/uniprotkb/F1SIZ2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100521113", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521113", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I5ZQ11-1", "protein_name": "POC1 centriolar protein homolog A", "gene_name": "Poc1a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAHSQEDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDTVDYGDMKARRPPPQASSAGTPPEMDLPVPPGRDRSLESVHSDAQEPISMPQTLTSTLEHIVGQLDVLTQTVSILEQRLTLTEDRLKQCLENQQLIMQRTPP", "length": 405 }, "evidence": [ { "id": "A0A5G2QC89", "url": "https://omabrowser.org/oma/group/A0A5G2QC89/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q2TBP4-1", "protein_name": "POC1 centriolar protein homolog A", "gene_name": "POC1A", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTAHCPEDPSLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDIVDYGEVLRVQRPPATRASSSGTLPEVDPLVPPGRGRSQESMQSHSQEPVSVPQSLTSTLEHIVGQLDVLTQTVSILEQRLTLTEDKLKQCLENQQLIMQRTTP", "length": 407 }, "evidence": [ { "id": "A0A5G2QC89", "url": "https://omabrowser.org/oma/group/A0A5G2QC89/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8JZX3-1", "protein_name": "POC1 centriolar protein homolog A", "gene_name": "Poc1a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAPSQEDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDIVDYGDMKARRPPPLTSSSGTLPKMDLPVPPGRDRSLESVQGEPQESISMPQTLTSTLEHIVGQLDILTQTVSILEQRLTLTEDRLKQCLENQQLIMQRTPP", "length": 405 }, "evidence": [ { "id": "A0A5G2QC89", "url": "https://omabrowser.org/oma/group/A0A5G2QC89/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8NBT0-1", "protein_name": "POC1 centriolar protein homolog A", "gene_name": "POC1A", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAPCAEDPSLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDIVDHGEVTKVPRPPATLASSMGNLPEVDFPVPPGRGRSVESVQSQPQEPVSVPQTLTSTLEHIVGQLDVLTQTVSILEQRLTLTEDKLKQCLENQQLIMQRATP", "length": 407 }, "evidence": [ { "id": "A0A5G2QC89", "url": "https://omabrowser.org/oma/group/A0A5G2QC89/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "spindle pole", "id": "GO:0000922", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000922", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QC89", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC89" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QC89", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC89" } ], "pmid": "" }, { "name": "centrosome", "id": "GO:0005813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005813", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QC89", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC89" } ], "pmid": "" }, { "name": "centriole", "id": "GO:0005814", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005814", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QC89", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC89" } ], "pmid": "" }, { "name": "ciliary basal body", "id": "GO:0036064", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036064", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QC89", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC89" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "cilium assembly", "id": "GO:0060271", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060271", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QC89", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC89" } ], "pmid": "" }, { "name": "cell projection organization", "id": "GO:0030030", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030030", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QC89", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC89" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 68, "end_pos": 70, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QC89-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 407, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QC89-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QC89" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 68, "end_pos": 70 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", 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"glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QCG3-1", "uniprot_ac": "A0A5G2QCG3", "uniprot_id": "A0A5G2QCG3_PIG", "mass": { "chemical_mass": 173878.0, "monoisotopic_mass": 173878.0 }, "refseq": {}, "gene_names": [ { "name": "UGGT2", "type": "recommended", "evidence": [ { "id": "A0A5G2QCG3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCG3" } ] } ], "protein_names": [ { "name": "UDP-glucose ceramide glucosyltransferase-like 1", "type": "recommended", "evidence": [ { "id": "A0A5G2QCG3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCG3/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Recognizes glycoproteins with minor folding defects. Reglucosylates single N-glycans near the misfolded part of the protein, thus providing quality control for protein folding in the endoplasmic reticulum. Reglucosylated proteins are recognized by calreticulin for recycling to the endoplasmic reticulum and refolding or degradation.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCG3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCG3#function" }, { "database": "UniProtKB", "id": "ARBA00045874", "url": "https://www.uniprot.org/uniprotkb/ARBA00045874#function" }, { "database": "UniProtKB", "id": "A0A5G2QEQ4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEQ4#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCG3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCG3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "UGGT2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCG3", "locus": { "chromosome": "11", "start_pos": 65307168, "end_pos": 65476544, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000009502", "url": "https://www.ensembl.org/id/ENSSSCG00000009502" } ] } } ], "crossref": [ { "id": "A0A5G2QCG3", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QCG3", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000009502", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000009502", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd06432", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06432", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR009448", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009448", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029044", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029044", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040497", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040497", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040525", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040525", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040692", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040692", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040693", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040693", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040694", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040694", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR11226", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11226", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11226:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11226:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06427", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06427", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18400", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18400", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18401", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18401", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18402", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18402", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18403", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18403", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18404", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18404", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "61304", "url": "https://www.rhea-db.org/rhea/61304", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QCG3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCG3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QCG3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCG3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QEQ4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEQ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QEQ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEQ4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAEAADAVRLLLSSTALWLLLLGAGTASASKAVTAHLTAKWPETPLLLEASEFMAEESNEKFWQFLETVQELAIYKKTESDYSYYNLILKKAGQFLDNLHINLLKFAFSIRAYSPTVQMFQQIAADEPPPDGCDAFVVIHKKHTCKINQIKKLLKKATSRPRPYLFKGDHKFPTNRENLPVIILYAEMGTRAFRQFHTVLSEKAQNGEILYVLRHYIQKPASQKMYLSGYGVELAIKSTEYKALDDTQVKTVTNTSVEDKTETNEVQGFLFGKLKERYSDLRDNLTTFQKYLIESNKEMMPLKVWELQDLSFQAASQIKSTPVYDAIKLMKDISQNFPVKARSLTRIAVNQHMREEIQENQKYLLDEFEIQPGDAYLYINGLHIDIDSYDPFSLLDMLKLEGKLMNGLHSLGINGEDMSTFLKLSSRGWEDTYALDIRHSSIMWINDLENDDLYASWPASCQELLKPVFPGSIPLIRRNFHNLVLFIDPAQEYTLDFIKLAELFYYHKIPLRIGFVFIVNTDDEVDGTNDAGVALWRAFNYIAEEHGVSQAFISIVHMYEKVKNKNILTVDNVKSVLQDKFPHANIWDILGVYSKYDDERKAGANFYKMTGLGPLPQALYNGESFDGEELNVNELEVAVLHRIMNVTKYLQKEVFMGTLNDETNAIDFLMDKDNVVPRINPLILQSKWQYLNLISTSVTADVEDFSTFLFLDSQDKSAVIAENMYYLTHEDGDVISLVTFWIIADFDKPSGRKVLFNALEHMETSVYSRLGIIYNPTSKIDEESTAISRGILAAFLTQRNNFLRNFLMKLTEEETATAIYSGAKIKTFLTEGMDKNAFEKKYNTIGVNIFRTHQLFCQEVLKLNPGEIGVVSNGKFLGPLDDNFYAEDFYLLEKITATNLIDAIEDIVETTEIDSEDLSDLIMKIDALVSSLPNHASRYDVTFLKENHSIIKINSQEEDMVFDVIAIVDPLTREAQKMAQLLIVLGKIINMKIKLFMNCRGKLSEAPLKSFYRFVLEPELTLTANDVAGPVAKFLDIPESPLLTLNMITPEGWLVETVHSNCDLDNIHLKDIERTVIAEYELEYLLLEGHCFDITTEQPPRGLQFTLGTKNKPVMVDTIVMANLGYFQLKANPGAWVLKLRQGKSEDIYQIVGHKGTDSQQERGDVVVVLNSFKSKILQVQVQKNPDRIKEDILSDKDGTKKGMWDSIKSFTKSLRKKDEKETDILNIFSVASGHLYERFLRIMMLSVLRNTKTPVKFWFLKNYLSPKFKEVIPHMAEEYGFQYELVQYRWPRWLHQQTEKQRIIWGYKILFLDVLFPLAVDKIIFVDADQIVRHDLKELRDFDLGGAPYGYTPFCDSRREMDGYRFWKTGYWASHLLRRKYHISALYVVDLKKFRKIAAGDRLRGQYQTLSQDPNSLSNLDQDLPNNMIYQVAIKSLPQDWLWCETWCDDESKQRAKTIDLCNNPKTKEPKLKAAARIVPEWVEYDTEIRRLLDHLENKKKNAILTHDEL", "length": 1511, "header": "tr|A0A5G2QCG3-1|A0A5G2QCG3_PIG Isoform 1 of UDP-glucose ceramide glucosyltransferase-like 1 OS=Sus scrofa OX=9823 GN=UGGT2 PE=3 SV=2 CANONICAL=A0A5G2QCG3-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QCG3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCG3/entry", "sequence": { "sequence": "MAEAADAVRLLLSSTALWLLLLGAGTASASKAVTAHLTAKWPETPLLLEASEFMAEESNEKFWQFLETVQELAIYKKTESDYSYYNLILKKAGQFLDNLHINLLKFAFSIRAYSPTVQMFQQIAADEPPPDGCDAFVVIHKKHTCKINQIKKLLKKATSRPRPYLFKGDHKFPTNRENLPVIILYAEMGTRAFRQFHTVLSEKAQNGEILYVLRHYIQKPASQKMYLSGYGVELAIKSTEYKALDDTQVKTVTNTSVEDKTETNEVQGFLFGKLKERYSDLRDNLTTFQKYLIESNKEMMPLKVWELQDLSFQAASQIKSTPVYDAIKLMKDISQNFPVKARSLTRIAVNQHMREEIQENQKYLLDEFEIQPGDAYLYINGLHIDIDSYDPFSLLDMLKLEGKLMNGLHSLGINGEDMSTFLKLSSRGWEDTYALDIRHSSIMWINDLENDDLYASWPASCQELLKPVFPGSIPLIRRNFHNLVLFIDPAQEYTLDFIKLAELFYYHKIPLRIGFVFIVNTDDEVDGTNDAGVALWRAFNYIAEEHGVSQAFISIVHMYEKVKNKNILTVDNVKSVLQDKFPHANIWDILGVYSKYDDERKAGANFYKMTGLGPLPQALYNGESFDGEELNVNELEVAVLHRIMNVTKYLQKEVFMGTLNDETNAIDFLMDKDNVVPRINPLILQSKWQYLNLISTSVTADVEDFSTFLFLDSQDKSAVIAENMYYLTHEDGDVISLVTFWIIADFDKPSGRKVLFNALEHMETSVYSRLGIIYNPTSKIDEESTAISRGILAAFLTQRNNFLRNFLMKLTEEETATAIYSGAKIKTFLTEGMDKNAFEKKYNTIGVNIFRTHQLFCQEVLKLNPGEIGVVSNGKFLGPLDDNFYAEDFYLLEKITATNLIDAIEDIVETTEIDSEDLSDLIMKIDALVSSLPNHASRYDVTFLKENHSIIKINSQEEDMVFDVIAIVDPLTREAQKMAQLLIVLGKIINMKIKLFMNCRGKLSEAPLKSFYRFVLEPELTLTANDVAGPVAKFLDIPESPLLTLNMITPEGWLVETVHSNCDLDNIHLKDIERTVIAEYELEYLLLEGHCFDITTEQPPRGLQFTLGTKNKPVMVDTIVMANLGYFQLKANPGAWVLKLRQGKSEDIYQIVGHKGTDSQQERGDVVVVLNSFKSKILQVQVQKNPDRIKEDILSDKDGTKKGMWDSIKSFTKSLRKKDEKETDILNIFSVASGHLYERFLRIMMLSVLRNTKTPVKFWFLKNYLSPKFKEVIPHMAEEYGFQYELVQYRWPRWLHQQTEKQRIIWGYKILFLDVLFPLAVDKIIFVDADQIVRHDLKELRDFDLGGAPYGYTPFCDSRREMDGYRFWKTGYWASHLLRRKYHISALYVVDLKKFRKIAAGDRLRGQYQTLSQDPNSLSNLDQDLPNNMIYQVAIKSLPQDWLWCETWCDDESKQRAKTIDLCNNPKTKEPKLKAAARIVPEWVEYDTEIRRLLDHLENKKKNAILTHDEL", "length": 1511, "header": "tr|A0A5G2QCG3-1|A0A5G2QCG3_PIG Isoform 1 of UDP-glucose ceramide glucosyltransferase-like 1 OS=Sus scrofa OX=9823 GN=UGGT2 PE=3 SV=2 CANONICAL=A0A5G2QCG3-1" }, "locus": { "chromosome": "11", "start_pos": 65476449, "end_pos": 65307756, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077595.2", "url": "https://www.ensembl.org/id/ENSSSCT00000077595.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062266.2", "url": "https://www.ensembl.org/id/ENSSSCP00000062266.2" } ] } }, { "isoform_ac": "A0A5G2QEQ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEQ4/entry", "sequence": { "sequence": "MAEAADAVRLLLSSTALWLLLLGAGTASASKAVTAHLTAKWPETPLLLEASEFMAEESNEKFWQFLETVQELAIYKKTESDYSYYNLILKKAGQFLDNLHINLLKFAFSIRAYSPTVQMFQQIAADEPPPDGCDAFVVIHKKHTCKINQIKKLLKKATSRPRPYLFKGDHKFPTNRENLPVIILYAEMGTRAFRQFHTVLSEKAQNGEILYVLRHYIQKPASQKMYLSGYGVELAIKSTEYKALDDTQVKTVTNTSVEDKTETNEVQGFLFGKLKERYSDLRDNLTTFQKYLIESNKEMMPLKVWELQDLSFQAASQIKSTPVYDAIKLMKDISQNFPVKARSLTRIAVNQHMREEIQENQKYLLDEFEIQPGDAYLYINGLHIDIDSYDPFSLLDMLKLEGKLMNGLHSLGINGEDMSTFLKLSSRGWEDTYALDIRHSSIMWINDLENDDLYASWPASCQELLKPVFPGSIPLIRRNFHNLVLFIDPAQEYTLDFIKLAELFYYHKIPLRIGFVFIVNTDDEVDGTNDAGVALWRAFNYIAEEHGVSQAFISIVHMYEKVKNKNILTVDNVKSVLQDKFPHANIWDILGVYSKYDDERKAGANFYKMTGLGPLPQALYNGESFDGEELNVNELEVAVLHRIMNVTKYLQKEVFMGTLNDETNAIDFLMDKDNVVPRINPLILQSKWQYLNLISTSVTADVEDFSTFLFLDSQDKSAVIAENMYYLTHEDGDVISLVTFWIIADFDKPSGRKVLFNALEHMETSVYSRLGIIYNPTSKIDEESTAISRGILAAFLTQRNNFLRNFLMKLTEEETATAIYSGAKIKTFLTEGMDKNAFEKKYNTIGVNIFRTHQLFCQEVLKLNPGEIGVVSNGKFLGPLDDNFYAEDFYLLEKITATNLIDAIEDIVETTEIDSEDLSDLIMKIDALVSSLPNHASRYDVTFLKENHSIIKINSQEEDMVFDVIAIVDPLTREAQKMAQLLIVLGKIINMKIKLFMNCRGKLSEAPLKSFYRFVLEPELTLTANDVAGPVAKFLDIPESPLLTLNMITPEGWLVETVHSNCDLDNIHLKDIERTVIAEYELEYLLLEGHCFDITTEQPPRGLQFTLGTKNKPVMVDTIVMANLGYFQLKANPGAWVLKLRQGKSEDIYQIVGHKGTDSQQERGDVVVVLNSFKSKILQVQVQKNPDRIKEDILSDKDGTKKGMWDSIKSFTKSLRKKDEKETDILNIFSVASGHLYERFLRIMMLSVLRNTKTPVKFWFLKNYLSPKFKEVIPHMAEEYGFQYELVQYRWPRWLHQQTEKQRIIWGYKILFLDVLFPLAVDKIIFVDADQIVRHDLKELRDFDLGGAPYGYTPFCDSRREMDGYRFWKTGYWASHLLRRKYHISALYVVDLKKFRKIAAGDRLRGQYQTLSQDPNSLSNLDQDLPNNMIYQVAIKSLPQDWLWCETWCDDESKQRAKTIDLCSNKRPDFSGFTYTHVQASLGVLSVSSFLHIMTQDQSPSILWLLHLLGSCHHPCSSGADPSSVTATCRIQP", "length": 1533, "header": "tr|A0A5G2QEQ4-1|A0A5G2QEQ4_PIG Computationally mapped isoform of UDP-glucose ceramide glucosyltransferase-like 1 OS=Sus scrofa OX=9823 GN=UGGT2 PE=3 SV=1 CANONICAL=A0A5G2QCG3-1" }, "locus": { "chromosome": "11", "start_pos": 65476449, "end_pos": 65318637, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089629.1", "url": "https://www.ensembl.org/id/ENSSSCT00000089629.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062674.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062674.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCG3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCG3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "endoplasmic reticulum lumen", "id": "GO:0005788", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005788", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCG3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCG3" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCG3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCG3" } ], "pmid": "" }, { "name": "protein-containing complex", "id": "GO:0032991", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032991", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCG3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCG3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "glycoprotein biosynthetic process", "id": "GO:0009101", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009101", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCG3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCG3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "UDP-glucose:glycoprotein glucosyltransferase activity", "id": "GO:0003980", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003980", "evidence": [ { "database": "UniProtKB", 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QCL1-1", "uniprot_ac": "A0A5G2QCL1", "uniprot_id": "A0A5G2QCL1_PIG", "mass": { "chemical_mass": 194262.0, "monoisotopic_mass": 194262.0 }, "refseq": {}, "gene_names": [ { "name": "C4A", "type": "recommended", "evidence": [ { "id": "A0A5G2QCL1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCL1" } ] } ], "protein_names": [ { "name": "Complement C4A (Rodgers blood group)", "type": "synonym", "evidence": [ { "id": "A0A5G2QCL1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCL1/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Precursor of non-enzymatic components of the classical, lectin and GZMK complement pathways, which consist in a cascade of proteins that leads to phagocytosis and breakdown of pathogens and signaling that strengthens the adaptive immune system.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCL1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCL1#function" }, { "database": "UniProtKB", "id": "ARBA00093394", "url": "https://www.uniprot.org/uniprotkb/ARBA00093394#function" }, { "database": "UniProtKB", "id": "A0A8W4FKZ4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FKZ4#function" }, { "database": "UniProtKB", "id": "A0ABB5UPQ4", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UPQ4#function" }, { "database": "UniProtKB", "id": "A0ABB5UPQ6", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UPQ6#function" }, { "database": "UniProtKB", "id": "A0ABB5US24", "url": "https://www.uniprot.org/uniprotkb/A0ABB5US24#function" } ] }, { "annotation": "Putative humoral mediator released following cleavage by complement proteases (C1S, MASP2 or GZMK, depending on the complement pathway). While it is strongly similar to anaphylatoxins, its role is unclear. Was reported to act as a mediator of local inflammatory process; however these effects were probably due to contamination with C3a and/C5a anaphylatoxins in biological assays.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCL1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCL1#function" }, { "database": "UniProtKB", "id": "ARBA00093351", "url": "https://www.uniprot.org/uniprotkb/ARBA00093351#function" }, { "database": "UniProtKB", "id": "A0A8W4FKZ4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FKZ4#function" }, { "database": "UniProtKB", "id": "A0ABB5UPQ4", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UPQ4#function" }, { "database": "UniProtKB", "id": "A0ABB5UPQ6", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UPQ6#function" }, { "database": "UniProtKB", "id": "A0ABB5US24", "url": "https://www.uniprot.org/uniprotkb/A0ABB5US24#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": 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"MRLLWVLIWASSFFALSLQKPRLLLFSPSVVHLGVPLSVGVQLQDAPPGQVVTGSVFLRNPSSTRDRCSPKVEFSLSSERDFVLLSLQISVAGAKECGLHLLRRAPDVQLVAQSSWLKDYLSKKTNIQGVNLFFSSRRGHIFLQTDQPVYNPGQRVRYRVFALDQKMRPTEETLTVMVENSHGLLVRKKEVYVPSSIFQDDLVIPDIAEPGTWKISARFSDGLDSNSSTQFEVKKYVLPNFEVTITPEQPYILTAPGFLNEIQMVIQARYVYGKPVQGVAYVRFGLLDEDDKKIFLRGLENQTKLVEGQCHISLPEAKVQGALQKLNITINDLPGKRLYVVAAVIESPGGEMEEAELTSWRFVSSPFSLDLSKTKRHLIPGAPFLLQALVRDVSGSPAAGIPVKVSAKLFSGSAPKNQDFQQNTDERGHVTVPIGIPKTISEMQLSVSAGSPHPATGTIIVRAPPPRSPGFLSIEQLDTRPPKVGDTLNLNLRAMGLVGSFSHFYYMILSRGQIVSVHRELRRDLTSVSVFVDHHLVPSFHFVAFYYQGGLPVANSLRVDIQAGACEGKLELNVDSGKAYHPGETLKIRLQTDSPALVALGAVDTALYAVGSKSHKPLNMAKVFEAINHYDLGCGPGGGDSATQVFEAAGLAFSDGDQLTPTRKSLGCPKKTKIRRKRNVNFQTAINEILGRYSSPLAKRCCQDGLTQLPMARTCAERVARVKNPACQEPFLSCCQFAEALRKKTRRGQGGFARAMELLQEEELIEEDDIPVRSFFPENWLWRVEEVPHSLQLSLLLPDSLTTWEIHGVSLSKSTGLCVATPARVRVFREFHLHLRLPVSIHRFEQLELRPVLYNYLDKDVPVSVHVSPVEGLCLAGGGGLAQQVLVPAGSARPVGFSVVPISAAAVSLKVVARGSFDFPVGDAVSKILQIANEGAIHQEELVYALNPQNVLGRNLEIPGHSDPNVIPDGDFRSFVRLTASDPLDTLGSEGALSPGGLASLLRLPRGCAEQTMFYLAPTLAASRYLDKTEQWSTLPPETKDHAVDLIQKGYTRIQEFRKNDGSYGAWLHRESSTWLTAFVLKVLSLAQEQVGGSPEKLQETAAWLLLQQKEDGSFHDPCPVIHRDMQGGLVGNDEKVALTAFVVIALHHGLAVFQDRNAEQFKRVENAISTANDFLGEKVSSGLLGSHAAAISAYALSLSGAPEQLQDIAHNNLMAMAQKIGDHLFWGTVPSSQSNTLSPTPAPQRPTDPMPQAPALWIETTAYALLHLLIREGKAEMADQTASWLTRQGSYKGGFRSTQDTVIALDALSAYWILSHTTEEKELNVTLSSMSRGGFKSHVVRLTNHQVKGLEEELQFSLGSKINVKVGGNSKGTLKARPEAFPERSVLASSVQILRAYNVIDLKNTTCQDLQIEVTVKGHVEYMLEANEDYEEYEYEDLPAQDDPGAHSQPVTPLQLFDGRRNRRRREAPKVAEEQESRVQYTVCIWRNGQVGLSGMAIADITLLSGFYAERADLEKLTSLSDRYVSHFETEGPHVLLYFDSVPTSRECVGFGAVQEVAIGLVQPASAVLYDYYNPEHKCSVFYGAPSKSKFLSTLCSADVCQCAEGKCPRQRRALERGLQDLDGYRMKFACYSPRVDYAFQVKVLREDSRAAFRLFETSITQVLHFTKDVKAAAAQARNFLVRASCRLHLEPGKEYLIMGLDGTTHDLKGDPQYLLDSNCWIEEMPSERLCRSTRHREPCAQLRDFIQEYSTQGCQV", "length": 1758, "header": "tr|A0A5G2QCL1-1|A0A5G2QCL1_PIG Isoform 1 of Complement C4A (Rodgers blood group) OS=Sus scrofa OX=9823 GN=C4A PE=1 SV=1 CANONICAL=A0A5G2QCL1-1" }, "locus": { "chromosome": "7", "start_pos": 24082950, "end_pos": 24068070, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079853.2", "url": "https://www.ensembl.org/id/ENSSSCT00000079853.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061845.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061845.1" } ] } }, { "isoform_ac": "A0A8W4FKZ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FKZ4/entry", "sequence": { "sequence": "MRLLWVLIWASSFFALSLQKPRLLLFSPSVVHLGVPLSVGVQLQDAPPGQVVTGSVFLRNPSSTRDRCSPKVEFSLSSERDFVLLSLQISVAGAKECGLHLLRRAPDVQLVAQSSWLKDYLSKKTNIQGVNLFFSSRRGHIFLQTDQPVYNPGQRVRYRVFALDQKMRPTEETLTVMVENSHGLLVRKKEVYVPSSIFQDDLVIPDIAEPGTWKISARFSDGLDSNSSTQFEVKKYVLPNFEVTITPEQPYILTAPGFLNEIQMVIQARYVYGKPVQGVAYVRFGLLDEDDKKIFLRGLENQTKLVEGQCHISLPEAKVQGALQKLNITINDLPGKRLYVVAAVIESPGGEMEEAELTSWRFVSSPFSLDLSKTKRHLIPGAPFLLQALVRDVSGSPAAGIPVKVSAKLFSGSAPKNQDFQQNTDERGHVTVPIGIPKTISEMQLSVSAGSPHPATGTIIVRAPPPRSPGFLSIEQLDTRPPKVGDTLNLNLRAMGLVGSFSHFYYMILSRGQIVSVHRELRRDLTSVSVFVDHHLVPSFHFVAFYYQGGLPVANSLRVDIQAGACEGKLELNVDSGKAYHPGETLKIRLQTDSPALVALGAVDTALYAVGSKSHKPLNMAKVFEAINHYDLGCGPGGGDSATQVFEAAGLAFSDGDQLTPTRKSLGCPKKTKIRRKRNVNFQTAINEILGRYSSPLAKRCCQDGLTQLPMARTCAERVARVKNPACQEPFLSCCQFAEALRKKTRRGQGGFARAMELLQEEELIEEDDIPVRSFFPENWLWRVEEVPHSLQLSLLLPDSLTTWEIHGVSLSKSTGLCVATPARVRVFREFHLHLRLPVSIHRFEQLELRPVLYNYLDKDVPVSVHVSPVEGLCLAGGGGLAQQVLVPAGSARPVGFSVVPISAAAVSLKVVARGSFDFPVGDAVSKILQIADRSPTRKPTALNEGAIHQEELVYALNPQNVLGRNLEIPGHSDPNVIPDGDFRSFVRLTASDPLDTLGSEGALSPGGLASLLRLPRGCAEQTMFYLAPTLAASRYLDKTEQWSTLPPETKDHAVDLIQKGYTRIQEFRKNDGSYGAWLHRESSTWLTAFVLKVLSLAQEQVGGSPEKLQETAAWLLLQQKEDGSFHDPCPVIHRDMQGGLVGNDEKVALTAFVVIALHHGLAVFQDRNAEQFKRVENAISTANDFLGEKVSSGLLGSHAAAISAYALSLSGAPEQLQDIAHNNLMAMAQKIGDHLFWGTVPSSQSNTLSPTPAPQRPTDPMPQAPALWIETTAYALLHLLIREGKAEMADQTASWLTRQGSYKGGFRSTQDTVIALDALSAYWILSHTTEEKELNVTLSSMSRGGFKSHVVRLTNHQVKGLEEELQFSLGSKINVKVGGNSKGTLKILRAYNVIDLKNTTCQDLQIEVTVKGHVEYMLEANEDYEEYEYEDLPAQDDPGAHSQPVTPLQLFDGRRNRRRREAPKVAEEQESRVQYTVCIWRNGQVGLSGMAIADITLLSGFYAERADLEKLTSLSDRYVSHFETEGPHVLLYFDSVPTSRECVGFGAVQEVAIGLVQPASAVLYDYYNPEHKCSVFYGAPSKSKFLSTLCSADVCQCAEGKCPRQRRALERGLQDLDGYRMKFACYSPRVDYAFQVKVLREDSRAAFRLFETSITQVLHFTKDVKAAAAQARNFLVRASCRLHLEPGKEYLIMGLDGTTHDLKGDPQYLLDSNCWIEEMPSERLCRSTRHREPCAQLRDFIQEYSTQGCQV", "length": 1752, "header": "tr|A0A8W4FKZ4-1|A0A5G2QCL1_PIG Computationally mapped isoform of Complement C4A (Rodgers blood group) OS=Sus scrofa OX=9823 GN=C4A PE=1 SV=1 CANONICAL=A0A5G2QCL1-1" }, "locus": { "chromosome": "7", "start_pos": 24082950, "end_pos": 24068070, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102168.2", "url": "https://www.ensembl.org/id/ENSSSCT00000102168.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080009.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080009.1" } ] } }, { "isoform_ac": "A0ABB5UPQ0-1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UPQ0/entry", "sequence": { "sequence": "MRLLWVLIWASSFFALSLQKPRLLLFSPSVVHLGVPLSVGVQLQDAPPGQVVTGSVFLRNPSSTRDRCSPKVEFSLSSERDFVLLSLQISVAGAKECGLHLLRRAPDVQLVAQSSWLKDYLSKKTNIQGVNLFFSSRRGHIFLQTDQPVYNPGQRVRYRVFALDQKMRPTEETLTVMVENSHGLLVRKKEVYVPSSIFQDDLVIPDIAEPGTWKISARFSDGLDSNSSTQFEVKKYVLPNFEVTITPEQPYILTAPGFLNEIQMVIQARYVYGKPVQGVAYVRFGLLDEDDKKIFLRGLENQTKLVEGQCHISLPEAKVQGALQKLNITINDLPGKRLYVVAAVIESPGGEMEEAELTSWRFVSSPFSLDLSKTKRHLIPGAPFLLQALVRDVSGSPAAGIPVKVSAKLFSGSAPKNQDFQQNTDERGHVTVPIGIPKTISEMQLSEGPDLCLCVCGPSPGALVPLRGLLLPRGPPGGQLPASGHPGWGLRGQAGAERGQWQGVPSWRDSKDPPANGFSSPGGAGSCGHGSVCRGQQVPQAPQHGQGL", "length": 548, "header": "tr|A0ABB5UPQ0-1|A0ABB5UPQ0_PIG Computationally mapped isoform of Complement C4A (Rodgers blood group) OS=Sus scrofa OX=9823 GN=C4A PE=1 SV=1 CANONICAL=A0A5G2QCL1-1" }, "locus": { "chromosome": "7", "start_pos": 24072673, "end_pos": 24068070, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107810.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107810.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000082196.1", "url": "https://www.ensembl.org/id/ENSSSCP00000082196.1" } ] } }, { "isoform_ac": "A0ABB5UPQ2-1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UPQ2/entry", "sequence": { "sequence": "MRLLWVLIWASSFFALSLQKPRLLLFSPSVVHLGVPLSVGVQLQDAPPGQVVTGSVFLRNPSSTRDRCSPKVEFSLSSERDFVLLSLQISVAGAKECGLHLLRRAPDVQLVAQSSWLKDYLSKKTNIQGVNLFFSSRRGHIFLQTDQPVYNPGQRVRYRVFALDQKMRPTEETLTVMVENSHGLLVRKKEVYVPSSIFQDDLVIPDIAEPGTWKISARFSDGLDSNSSTQFEVKKYGTSTGSQCRGWHMYALGSWMRMIKRFSFGGWRIRPSW", "length": 273, "header": "tr|A0ABB5UPQ2-1|A0ABB5UPQ2_PIG Computationally mapped isoform of Complement C4A (Rodgers blood group) OS=Sus scrofa OX=9823 GN=C4A PE=1 SV=1 CANONICAL=A0A5G2QCL1-1" }, "locus": { "chromosome": "7", "start_pos": 24070489, "end_pos": 24068070, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107811.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107811.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000082197.1", "url": "https://www.ensembl.org/id/ENSSSCP00000082197.1" } ] } }, { "isoform_ac": "A0ABB5UPQ4-1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UPQ4/entry", "sequence": { "sequence": "MRLLWVLIWASSFFALSLQKPRLLLFSPSVVHLGVPLSVGVQLQDAPPGQVVTGSVFLRNPSSTRDRCSPKVEFSLSSERDFVLLSLQISVAGAKECGLHLLRRAPDVQLVAQSSWLKDYLSKKTNIQGVNLFFSSRRGHIFLQTDQPVYNPGQRVRYRVFALDQKMRPTEETLTVMVENSHGLLVRKKEVYVPSSIFQDDLVIPDIAEPGTWKISARFSDGLDSNSSTQFEVKKYVLPNFEVTITPEQPYILTAPGFLNEIQMVIQARYVYGKPVQGVAYVRFGLLDEDDKKIFLRGLENQTKLVEGQCHISLPEAKVQGALQKLNITINDLPGKRLYVVAAVIESPGGEMEEAELTSWRFVSSPFSLDLSKTKRHLIPGAPFLLQALVRDVSGSPAAGIPVKVSAKLFSGSAPKNQDFQQNTDERGHVTVPIGIPKTISEMQLSVSAGSPHPATGTIIVRAPPPRSPGFLSIEQLDTRPPKVGDTLNLNLRAMGLVGSFSHFYYMILSRGQIVSVHRELRRDLTSVSVFVDHHLVPSFHFVAFYYQGGLPVANSLRVDIQAGACEGKLELNVDSGKAYHPGETLKIRLQTDSPALVALGAVDTALYAVGSKSHKPLNMAKVFEAINHYDLGCGPGGGDSATQVFEAAGLAFSDGDQLTPTRKSLGCPKKTKIRRKRNVNFQTAINEILGRYSSPLAKRCCQDGLTQLPMARTCAERVARVKNPACQEPFLSCCQFAEALRKKTRRGQGGFARAMELLQEEELIEEDDIPVRSFFPENWLWRVEEVPHSLQLSLLLPDSLTTWEIHGVSLSKSTGLCVATPARVRVFREFHLHLRLPVSIHRFEQLELRPVLYNYLDKDVPVSVHVSPVEGLCLAGGGGLAQQNEGAIHQEELVYALNPQNVLGRNLEIPGHSDPNVIPDGDFRSFVRLTASDPLDTLGSEGALSPGGLASLLRLPRGCAEQTMFYLAPTLAASRYLDKTEQWSTLPPETKDHAVDLIQKGYTRIQEFRKNDGSYGAWLHRESSTWLTAFVLKVLSLAQEQVGGSPEKLQETAAWLLLQQKEDGSFHDPCPVIHRDMQGGLVGNDEKVALTAFVVIALHHGLAVFQDRNAEQFKRVENAISTANDFLGEKVSSGLLGSHAAAISAYALSLSGAPEQLQDIAHNNLMAMAQKIGDHLFWGTVPSSQSNTLSPTPAPQRPTDPMPQAPALWIETTAYALLHLLIREGKAEMADQTASWLTRQGSYKGGFRSTQDTVIALDALSAYWILSHTTEEKELNVTLSSMSRGGFKSHVVRLTNHQVKGLEEELQFSLGSKINVKVGGNSKGTLKILRAYNVIDLKNTTCQDLQIEVTVKGHVEYMLEANEDYEEYEYEDLPAQDDPGAHSQPVTPLQLFDGRRNRRRREAPKVAEEQESRVQYTVCIWRNGQVGLSGMAIADITLLSGFYAERADLEKLTSLSDRYVSHFETEGPHVLLYFDSVPTSRECVGFGAVQEVAIGLVQPASAVLYDYYNPEHKCSVFYGAPSKSKFLSTLCSADVCQCAEGKCPRQRRALERGLQDLDGYRMKFACYSPRVDYAFQVKVLREDSRAAFRLFETSITQVLHFTKDVKAAAAQARNFLVRASCRLHLEPGKEYLIMGLDGTTHDLKGDPQYLLDSNCWIEEMPSERLCRSTRHREPCAQLRDFIQEYSTQGCQV", "length": 1693, "header": "tr|A0ABB5UPQ4-1|A0ABB5UPQ4_PIG Computationally mapped isoform of Complement C4A (Rodgers blood group) OS=Sus scrofa OX=9823 GN=C4A PE=1 SV=1 CANONICAL=A0A5G2QCL1-1" }, "locus": { "chromosome": "7", "start_pos": 24082950, "end_pos": 24068070, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107815.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107815.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000082201.1", "url": "https://www.ensembl.org/id/ENSSSCP00000082201.1" } ] } }, { "isoform_ac": "A0ABB5UPQ6-1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UPQ6/entry", "sequence": { "sequence": "MRLLWVLIWASSFFALSLQKPRLLLFSPSVVHLGVPLSVGVQLQDAPPGQVVTGSVFLRNPSSTRDRCSPKVEFSLSSERDFVLLSLQISVAGAKECGLHLLRRAPDVQLVAQSSWLKDYLSKKTNIQGVNLFFSSRRGHIFLQTDQPVYNPGQRVRYRVFALDQKMRPTEETLTVMVENSHGLLVRKKEVYVPSSIFQDDLVIPDIAEPGTWKISARFSDGLDSNSSTQFEVKKYVLPNFEVTITPEQPYILTAPGFLNEIQMVIQARYVYGKPVQGVAYVRFGLLDEDDKKIFLRGLENQTKLVEGQCHISLPEAKRCCQDGLTQLPMARTCAERVARVKNPACQEPFLSCCQFAEALRKKTRRGQGGFARAMELLQEEELIEEDDIPVRSFFPENWLWRVEEVPHSLQLSLLLPDSLTTWEIHGVSLSKSTGLCVATPARVRVFREFHLHLRLPVSIHRFEQLELRPVLYNYLDKDVPVSVHVSPVEGLCLAGGGGLAQQVLVPAGSARPVGFSVVPISAAAVSLKVVARGSFDFPVGDAVSKILQIANEGAIHQEELVYALNPQNVLGRNLEIPGHSDPNVIPDGDFRSFVRLTASDPLDTLGSEGALSPGGLASLLRLPRGCAEQTMFYLAPTLAASRYLDKTEQWSTLPPETKDHAVDLIQKGYTRIQEFRKNDGSYGAWLHRESSTWLTAFVLKVLSLAQEQVGGSPEKLQETAAWLLLQQKEDGSFHDPCPVIHRDMQGGLVGNDEKVALTAFVVIALHHGLAVFQDRNAEQFKRVENAISTANDFLGEKVSSGLLGSHAAAISAYALSLSGAPEQLQDIAHNNLMAMAQKIGDHLFWGTVPSSQSNTLSPTPAPQRPTDPMPQAPALWIETTAYALLHLLIREGKAEMADQTASWLTRQGSYKGGFRSTQDTVIALDALSAYWILSHTTEEKELNVTLSSMSRGGFKSHVVRLTNHQVKGLEEELQFSLGSKINVKVGGNSKGTLKILRAYNVIDLKNTTCQDLQIEVTVKGHVEYMLEANEDYEEYEYEDLPAQDDPGAHSQPVTPLQLFDGRRNRRRREAPKVAEEQESRVQYTVCIWRNGQVGLSGMAIADITLLSGFYAERADLEKLTSLSDRYVSHFETEGPHVLLYFDSVPTSRECVGFGAVQEVAIGLVQPASAVLYDYYNPEHKCSVFYGAPSKSKFLSTLCSADVCQCAEGKCPRQRRALERGLQDLDGYRMKFACYSPRVDYAFQVKVLREDSRAAFRLFETSITQVLHFTKDVKAAAAQARNFLVRASCRLHLEPGKEYLIMGLDGTTHDLKGDPQYLLDSNCWIEEMPSERLCRSTRHREPCAQLRDFIQEYSTQGCQV", "length": 1360, "header": "tr|A0ABB5UPQ6-1|A0ABB5UPQ6_PIG Computationally mapped isoform of Complement C4A (Rodgers blood group) OS=Sus scrofa OX=9823 GN=C4A PE=1 SV=1 CANONICAL=A0A5G2QCL1-1" }, "locus": { "chromosome": "7", "start_pos": 24082950, "end_pos": 24068070, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107816.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107816.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000082202.1", "url": "https://www.ensembl.org/id/ENSSSCP00000082202.1" } ] } }, { "isoform_ac": "A0ABB5UQS6-1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UQS6/entry", "sequence": { "sequence": "MRLLWVLIWASSFFALSLQKPRLLLFSPSVVHLGVPLSVGVQLQDAPPGQVVTGSVFLRNPSSTRDRCSPKVEFSLSSERDFVLLSLQISVAGAKECGLHLLRRAPDVQLVAQSSWLKDYLSKKTNIQGVNLFFSSRRGHIFLQTDQPVYNPGQRVRYRVFALDQKMRPTEETLTVMVENSHGLLVRKKEVYVPSSIFQDDLVIPDIAEWPGFQQQHPVRGEEICPSQL", "length": 229, "header": "tr|A0ABB5UQS6-1|A0ABB5UQS6_PIG Computationally mapped isoform of Complement C4A (Rodgers blood group) OS=Sus scrofa OX=9823 GN=C4A PE=1 SV=1 CANONICAL=A0A5G2QCL1-1" }, "locus": { "chromosome": "7", "start_pos": 24070011, "end_pos": 24068070, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107812.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107812.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000082198.1", "url": "https://www.ensembl.org/id/ENSSSCP00000082198.1" } ] } }, { "isoform_ac": "A0ABB5UQY5-1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UQY5/entry", "sequence": { "sequence": "MRLLWVLIWASSFFALSLQKPRLLLFSPSVVHLGVPLSVGVQLQDAPPGQVVTGSVFLRNPSSTRDRCSPKVEFSLSSERDFVLLSLQISVAGAKECGLHLLRRAPDVQLVAQSSWLKDYLSKKTNIQGVNLFFSSRRGHIFLQTDQPVYNPGQRVRYRVFALDQKMRPTEETLTVMVENSHGLLVRKKEVYVPSSIFQDDLVIPDIAEPGTWKISARFSDGLDSNSSTQFEVKKYVLPNFEVTITPEQPYILTAPGFLNEIQMVIQARYVYGKPVQGVAYVRFGLLDEDDKKIFLRGLENQTKLVEGQCHISLPEAKVQGALQKLNITINDLPGKRLYVVAAVIESPGGEMEEAELTSWRFVSSPFSLDLSKTKRHLIPGAPFLLQALVRDVSGSPAAGIPVKVSAKLFSGSAPKNQDFQQNTDERGHVTVPIGIPKTISEMQLSVSAGSPHPATGTIIVRAPPPRSPGFLSIEQLDTRPPKVGDTLNLNLRAMGLVGSFSHFYYMILSRGQIVSVHRELRRDLTSVSVFVDHHLVPSFHFVAFYYQGGLPVANSLRVDIQAGACEGKLELNVDSGKAYHPGETLKIRLQTDSPALVALGAVDTALYAVGSKSHKPLNMAKVFEAINHYDLGCGPGGGDSATQVFEAAGLAFSDGDQLTPTRKSLGCPKKTKIRRKRNVNFQTAINEILGRYSSPLAKRCCQDGLTQLPMARTCAERVARVKNPACQEPFLSCCQFAEALRKKTRRGQGGFARAMELLQEEELIEEDDIPVRSFFPENWLWRVEEVPHSLQLSLLLPDSLTTWEIHGVSLSKSTGLCVATPARVRVFREFHLHLRLPVSIHRFEQLELRPVLYNYLDKDVPVSVHVSPVEGLCLAGGGGLAQQVLVPAGSARPVGFSVVPISAAAVSLKVVARGSFDFPVGDAVSKILQIANEGAIHQEELVYALNPQNVLGRNLEIPGHSDPNVIPDGDFRSFVRLTASDPLDTLGSEGALSPGGLASLLRLPRGCAEQTMFYLAPTLAASRYLDKTEQWSTLPPETKDHAVDLIQKGYTRIQEFRKNDGSYGAWLHRESSTWGAWWEMTRRWRSQPSWSSPFITGWPSSRTGMRSSLRGWKTLSRQQMISWGRKCLPGSWAPTQLPSRPMRCRCPGPPSNCRILPTTTSWPWPRRLAIICSGAQSPVLRATPCHPRRLLRDQQTPCPRPRPCGLKPQPMPCCTC", "length": 1217, "header": "tr|A0ABB5UQY5-1|A0ABB5UQY5_PIG Computationally mapped isoform of Complement C4A (Rodgers blood group) OS=Sus scrofa OX=9823 GN=C4A PE=1 SV=1 CANONICAL=A0A5G2QCL1-1" }, "locus": { "chromosome": "7", "start_pos": 24076910, "end_pos": 24068070, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107813.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107813.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000082199.1", "url": "https://www.ensembl.org/id/ENSSSCP00000082199.1" } ] } }, { "isoform_ac": "A0ABB5US24-1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5US24/entry", "sequence": { "sequence": "MRLLWVLIWASSFFALSLQKPRLLLFSPSVVHLGVPLSVGVQLQDAPPGQVVTGSVFLRNPSSTRDRCSPKVEFSLSSERDFVLLSLQISVAGAKECGLHLLRRAPDVQLVAQSSWLKDYLSKKTNIQGVNLFFSSRRGHIFLQTDQPVYNPGQRVRYRVFALDQKMRPTEETLTVMVENSHGLLVRKKEVYVPSSIFQDDLVIPDIAEPGTWKISARFSDGLDSNSSTQFEVKKYVLPNFEVTITPEQPYILTAPGFLNEIQMVIQARYVYGKPVQGVAYVRFGLLDEDDKKIFLRGLENQTKLVEGQCHISLPEAKVQGALQKLNITINDLPGKRLYVVAAVIESPGGEMEEAELTSWRFVSSPFSLDLSKTKRHLIPGAPFLLQNTDERGHVTVPIGIPKTISEMQLSVSAGSPHPATGTIIVRAPPPRSPGFLSIEQLDTRPPKVGDTLNLNLRAMGLVGSFSHFYYMILSRGQIVSVHRELRRDLTSVSVFVDHHLVPSFHFVAFYYQGGLPVANSLRVDIQAGACEGKLELNVDSGKAYHPGETLKIRLQTDSPALVALGAVDTALYAVGSKSHKPLNMAKVFEAINHYDLGCGPGGGDSATQVFEAAGLAFSDGDQLTPTRKSLGCPKKTKIRRKRNVNFQTAINEILGRYSSPLAKRCCQDGLTQLPMARTCAERVARVKNPACQEPFLSCCQFAEALRKKTRRGQGGFARAMELLQEEELIEEDDIPVRSFFPENWLWRVEEVPHSLQLSLLLPDSLTTWEIHGVSLSKSTGLCVATPARVRVFREFHLHLRLPVSIHRFEQLELRPVLYNYLDKDVPVSVHVSPVEGLCLAGGGGLAQQVLVPAGSARPVGFSVVPISAAAVSLKVVARGSFDFPVGDAVSKILQIANEGAIHQEELVYALNPQNVLGRNLEIPGHSDPNVIPDGDFRSFVRLTASDPLDTLGSEGALSPGGLASLLRLPRGCAEQTMFYLAPTLAASRYLDKTEQWSTLPPETKDHAVDLIQKGYTRIQEFRKNDGSYGAWLHRESSTWLTAFVLKVLSLAQEQVGGSPEKLQETAAWLLLQQKEDGSFHDPCPVIHRDMQGGLVGNDEKVALTAFVVIALHHGLAVFQDRNAEQFKRVENAISTANDFLGEKVSSGLLGSHAAAISAYALSLSGAPEQLQDIAHNNLMAMAQKIGDHLFWGTVPSSQSNTLSPTPAPQRPTDPMPQAPALWIETTAYALLHLLIREGKAEMADQTASWLTRQGSYKGGFRSTQDTVIALDALSAYWILSHTTEEKELNVTLSSMSRGGFKSHVVRLTNHQVKGLEEELQFSLGSKINVKVGGNSKGTLKILRAYNVIDLKNTTCQDLQIEVTVKGHVEYMLEANEDYEEYEYEDLPAQDDPGAHSQPVTPLQLFDGRRNRRRREAPKVAEEQESRVQYTVCIWRNGQVGLSGMAIADITLLSGFYAERADLEKLTSLSDRYVSHFETEGPHVLLYFDSVPTSRECVGFGAVQEVAIGLVQPASAVLYDYYNPEHKCSVFYGAPSKSKFLSTLCSADVCQCAEGKCPRQRRALERGLQDLDGYRMKFACYSPRVDYAFQVKVLREDSRAAFRLFETSITQVLHFTKDVKAAAAQARNFLVRASCRLHLEPGKEYLIMGLDGTTHDLKGDPQYLLDSNCWIEEMPSERLCRSTRHREPCAQLRDFIQEYSTQGCQV", 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"evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FKZ4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FKZ4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-166663", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-166663", "resource": "Reactome", "description": "Initial triggering of complement" }, { "id": "R-SSC-174577", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174577", "resource": "Reactome", "description": "Activation of C3 and C5" }, { "id": "R-SSC-381426", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-381426", "resource": "Reactome", "description": "Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)" }, { "id": "R-SSC-8957275", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8957275", "resource": "Reactome", "description": "Post-translational protein phosphorylation" }, { "id": "R-SSC-977606", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-977606", "resource": "Reactome", "description": "Regulation of Complement cascade" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCL1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCL1" } ], "pmid": "" }, { "name": "cell surface", "id": "GO:0009986", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009986", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCL1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCL1" } ], "pmid": "" }, { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCL1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCL1" } ], "pmid": "" 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[], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD05", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD05" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD05", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD05" } ], "pmid": "" }, { "name": "tryptophan-tRNA ligase activity", "id": "GO:0004830", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004830", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD05", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD05" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD05", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD05" } ], "pmid": "" }, { "name": "mitochondrial matrix", "id": "GO:0005759", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005759", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD05", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD05" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "mitochondrial tryptophanyl-tRNA aminoacylation", "id": "GO:0070183", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070183", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD05", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD05" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "24080", "name": "", "equation": "tRNA(Trp) + L-tryptophan + ATP = L-tryptophyl-tRNA(Trp) + AMP + diphosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "24080", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/24080" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QD05-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 360, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QD05-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QD05" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QD63-1", "uniprot_ac": "A0A5G2QD63", "uniprot_id": "A0A5G2QD63_PIG", "mass": { "chemical_mass": 92083.0, "monoisotopic_mass": 92083.0 }, "refseq": { "ac": 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vitreous of the eye.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD63", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD63#function" }, { "database": "UniProtKB", "id": "ARBA00054091", "url": "https://www.uniprot.org/uniprotkb/ARBA00054091#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD63", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD63" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "COL9A1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD63", "locus": { "chromosome": "1", "start_pos": 50403361, "end_pos": 50498332, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004274", "url": "https://www.ensembl.org/id/ENSSSCG00000004274" } ] } } ], "crossref": [ { "id": "A0A5G2QD63", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QD63", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000004274", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004274", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100155319", "url": "https://www.ncbi.nlm.nih.gov/gene/100155319", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR008160", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008160", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013320", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013320", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048287", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048287", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050149", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050149", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100155319", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100155319", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QD63", "url": "https://www.orthodb.org/?gene=A0A5G2QD63", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24023", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24023", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24023:SF1113", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24023:SF1113", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24023:SF918", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24023:SF918", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01391", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01391", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-1650814", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1650814", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-186797", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-186797", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-2022090", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2022090", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-216083", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-216083", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-3000178", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3000178", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8948216", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8948216", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003121321", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003121321", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QD63", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD63", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QD63-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD63-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8X9AEQ8", "url": "https://www.uniprot.org/uniprotkb/A0A8X9AEQ8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8X9AEQ8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8X9AEQ8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTSFWKIPVFFFVCSFLGSWGSTTVKRRPRFPVNSNSNGENELCPKVRIGQDDLPGFDLISQFQIDKAASRRAIQRVVGSTALQVAYKLGKNVDFRIPTRQLYPSGLPEEYSFLTTFRMTGSTLEKNWSIWQIQDSSGKEQVGVKINGQTKSVAFSYKGLDGSLQTAAFSNLPSLFDSQWHKIMIGVERNSATLFVDCNRIESLPIKPRGQIDVDGFAVLGKLVDNPQVSVPFELQWMLIHCDPLRPSRETCHELPARITPSQTIDQRGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGPPGPPGPPGEPGKPGVPGKPGTPGADGLTGPDGSPGSVGPRGQKGEPGAPGPRGFPGRGIPGPPGPPGGAGLPGELGRVGPIGDPGRRGPPGPPGPPGPSGTIGFHDGDPLCPNSCPPGRSGYPGLPGMRGHKGAKGEVGEPGRQGHKGEEGDQGEPGEVGAQGPPGAQGLRGITGIAGAKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGDRGAQGSRGIPGLPGPKGDTGLPGVDGREGIPGMPGTKGEPGKPGPPGEAGLQGLPGIPGIPGAKGVAGEKGNTGAPGKPGQLGNSGKPGQQGPPGEVGPRGPRGLPGSRGEIGPVGPPGPPGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGVSGEEGEAGERGELGDIGLPGPKGSVGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGIEGPPGRAPTDQHIKQVCMRVMQEHFAAMAASLKRPESGASGLPGRPGPPGPPGPPGENGFPGQMGLRGLPGMKGPPGALGLRGPKGDMGERGDRGPPGRGPKGLPGATGLPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGPPGFCEPASCTMQAGQRAFNSKGPDQ", "length": 922, "header": "tr|A0A5G2QD63-1|A0A5G2QD63_PIG Isoform 1 of Collagen alpha-1(IX) chain OS=Sus scrofa OX=9823 GN=COL9A1 PE=3 SV=1 CANONICAL=A0A5G2QD63-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QD63-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD63/entry", "sequence": { "sequence": "MTSFWKIPVFFFVCSFLGSWGSTTVKRRPRFPVNSNSNGENELCPKVRIGQDDLPGFDLISQFQIDKAASRRAIQRVVGSTALQVAYKLGKNVDFRIPTRQLYPSGLPEEYSFLTTFRMTGSTLEKNWSIWQIQDSSGKEQVGVKINGQTKSVAFSYKGLDGSLQTAAFSNLPSLFDSQWHKIMIGVERNSATLFVDCNRIESLPIKPRGQIDVDGFAVLGKLVDNPQVSVPFELQWMLIHCDPLRPSRETCHELPARITPSQTIDQRGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGPPGPPGPPGEPGKPGVPGKPGTPGADGLTGPDGSPGSVGPRGQKGEPGAPGPRGFPGRGIPGPPGPPGGAGLPGELGRVGPIGDPGRRGPPGPPGPPGPSGTIGFHDGDPLCPNSCPPGRSGYPGLPGMRGHKGAKGEVGEPGRQGHKGEEGDQGEPGEVGAQGPPGAQGLRGITGIAGAKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGDRGAQGSRGIPGLPGPKGDTGLPGVDGREGIPGMPGTKGEPGKPGPPGEAGLQGLPGIPGIPGAKGVAGEKGNTGAPGKPGQLGNSGKPGQQGPPGEVGPRGPRGLPGSRGEIGPVGPPGPPGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGVSGEEGEAGERGELGDIGLPGPKGSVGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGIEGPPGRAPTDQHIKQVCMRVMQEHFAAMAASLKRPESGASGLPGRPGPPGPPGPPGENGFPGQMGLRGLPGMKGPPGALGLRGPKGDMGERGDRGPPGRGPKGLPGATGLPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGPPGFCEPASCTMQAGQRAFNSKGPDQ", "length": 922, "header": "tr|A0A5G2QD63-1|A0A5G2QD63_PIG Isoform 1 of 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"MGKVAAAALGAEVGVRIALFAAFLVTELLPPFQRLIQPEEMWLYRNPYFEAEYFPTKPMFVIAFLSPLSLILLAKCLKKADTADSQQACLAASLALALNGVFTNTVKLIVGRPRPDFFYRCFPDGQAHPDSVCTGDKDVVNEGRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPRGRGKSWRFCAFLSPLLLAAVIALSRCDYKHHWQDVLVGSAMGLTFAYVCYRQYYPPLTDAECHKPLQRSPALPTTEKQPGAPYHFAV", "length": 263, "header": "tr|A0A5G2QDB9-1|A0A5G2QDB9_PIG Isoform 1 of Phospholipid phosphatase 5 OS=Sus scrofa OX=9823 GN=PLPP5 PE=3 SV=1 CANONICAL=A0A5G2QDB9-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QDB9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDB9/entry", "sequence": { "sequence": "MGKVAAAALGAEVGVRIALFAAFLVTELLPPFQRLIQPEEMWLYRNPYFEAEYFPTKPMFVIAFLSPLSLILLAKCLKKADTADSQQACLAASLALALNGVFTNTVKLIVGRPRPDFFYRCFPDGQAHPDSVCTGDKDVVNEGRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPRGRGKSWRFCAFLSPLLLAAVIALSRCDYKHHWQDVLVGSAMGLTFAYVCYRQYYPPLTDAECHKPLQRSPALPTTEKQPGAPYHFAV", "length": 263, "header": "tr|A0A5G2QDB9-1|A0A5G2QDB9_PIG Isoform 1 of Phospholipid phosphatase 5 OS=Sus scrofa OX=9823 GN=PLPP5 PE=3 SV=1 CANONICAL=A0A5G2QDB9-1" }, "locus": { "chromosome": "15", "start_pos": 48250552, "end_pos": 48246109, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068993.2", "url": "https://www.ensembl.org/id/ENSSSCT00000068993.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062606.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062606.1" } ] } }, { "isoform_ac": "F1RZJ4-1", "url": "https://www.uniprot.org/uniprotkb/F1RZJ4/entry", "sequence": { "sequence": "MGKVAAAALGAEVGVRIALFAAFLVTELLPPFQRLIQPEEMWLYRNPYFEAEYFPTKPMFVIAFLSPLSLILLAKCLKKADTADSQQACLAASLALALNGVFTNTVKLIVGRPRPDFFYRCFPDGQAHPDSVCTGDKDVVNEGRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPRGRGKSWRFCAFLSPLLLAAVIALSRCDYKHHWQDPFIW", "length": 214, "header": "tr|F1RZJ4-1|A0A5G2QDB9_PIG Computationally mapped isoform of Phospholipid phosphatase 5 OS=Sus scrofa OX=9823 GN=PLPP5 PE=3 SV=3 CANONICAL=A0A5G2QDB9-1" }, "locus": { "chromosome": "15", "start_pos": 48250093, "end_pos": 48246109, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017227.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017227.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016765.4", "url": "https://www.ensembl.org/id/ENSSSCP00000016765.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1RZJ4", "url": "https://www.uniprot.org/uniprotkb/F1RZJ4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-2029485", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2029485", "resource": "Reactome", "description": "Role of phospholipids in phagocytosis" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDB9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDB9" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDB9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDB9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "phospholipid metabolic process", "id": "GO:0006644", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006644", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDB9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDB9" } ], "pmid": "" }, { "name": "phospholipid dephosphorylation", "id": "GO:0046839", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046839", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDB9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDB9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "phosphatidate phosphatase activity", "id": "GO:0008195", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008195", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDB9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDB9" } ], "pmid": "" }, { "name": "diacylglycerol diphosphate phosphatase activity", "id": "GO:0000810", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000810", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDB9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDB9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "27429", "name": "", "equation": "a 1,2-diacyl-sn-glycero-3-phosphate + H2O = a 1,2-diacyl-sn-glycerol + phosphate", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "27429", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/27429" } ] }, { "id": "27449", "name": "", "equation": "a 1,2-diacyl-sn-glycerol 3-diphosphate + H2O = a 1,2-diacyl-sn-glycero-3-phosphate + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "27449", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/27449" } ] }, { "id": "39835", "name": "", "equation": "1-(9Z-octadecenoyl)-sn-glycero-3-phosphate + H2O = 1-(9Z-octadecenoyl)-sn-glycerol + phosphate", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "39835", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/39835" } ] }, { "id": "42856", "name": "", "equation": "1,2-dioctanoyl-sn-glycero-3-diphosphate + H2O = 1,2-dioctanoyl-sn-glycero-3-phosphate + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "42856", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/42856" } ] }, { "id": "42860", "name": "", "equation": "1,2-dioctanoyl-sn-glycero-3-phosphate + H2O = 1,2-dioctanoyl-sn-glycerol + phosphate", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "42860", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/42860" } ] }, { "id": "R-SSC-2029468", "name": "Conversion of PA into DAG by PAP-1", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-2029468", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2029468" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QDB9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 263, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QDB9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QDB9" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QDB9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDB9" }, { "id": "SM00014", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00014" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Phosphatidic acid phosphatase type 2/haloperoxidase", "eco_id": "ECO_0000259", "start_pos": 88, "end_pos": 226, "start_aa": "Ala", "end_aa": "Tyr", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QDE7-1", "uniprot_ac": "A0A5G2QDE7", "uniprot_id": "A0A5G2QDE7_PIG", "mass": { "chemical_mass": 46901.0, "monoisotopic_mass": 46901.0 }, "refseq": {}, "gene_names": [ { "name": "GORASP2", "type": "recommended", "evidence": [ { "id": "A0A5G2QDE7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDE7" } ] } ], "protein_names": [ { "name": "Golgi reassembly stacking protein 2", "type": "synonym", "evidence": [ { "id": "A0A5G2QDE7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDE7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDE7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDE7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GORASP2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDE7", "locus": { "chromosome": "15", "start_pos": 77130620, "end_pos": 77048136, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015943", "url": "https://www.ensembl.org/id/ENSSSCG00000015943" } ] } } ], "crossref": [ { "id": "A0A5G2QDE7", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QDE7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000015943", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015943", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR007583", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007583", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR024958", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024958", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036034", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036034", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "GLPEVMH", "url": "https://omabrowser.org/oma/group/GLPEVMH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR12893", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12893", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12893:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12893:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04495", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04495", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-162658", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-162658", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QDE7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDE7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QDE7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDE7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QEQ1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEQ1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QEQ1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEQ1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R6D3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6D3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R6D3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6D3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S1U5", "url": "https://www.uniprot.org/uniprotkb/F1S1U5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S1U5-1", "url": "https://www.uniprot.org/uniprotkb/F1S1U5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGSSQSVEIPGGGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELRETSVTPSNMWGGQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTVMNESEDLFSLIETHEAKPLKLYVYNTDTDNCREVIITPNSAWGGEGSLGCGIGYGYLHRIPTRPFEEGKKISLPGQMTGTPITPLKDGFTEVQLSSVNPPSLSPPGTTEIEQGLSGLSISSTPPAVSNVLSTGVPTVPLLPPQVNQSLTSVPPMNPATTLPGLIPLPAGLPNLPTLPNLNLPAPIVPGVGLPELVNPGLPPLPSLPPRNLPGIAPLPLPTEFLPSFLVPEVSTAAGSGELLSSLPPASSPPSDPVPTSVRADAASALAVAVTPPTPKAPTTAEDRASESAPASEKPASAGTDANASESP", "length": 451, "header": "tr|A0A5G2QDE7-1|A0A5G2QDE7_PIG Isoform 1 of Golgi reassembly stacking protein 2 OS=Sus scrofa OX=9823 GN=GORASP2 PE=1 SV=1 CANONICAL=A0A5G2QDE7-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QDE7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDE7/entry", "sequence": { "sequence": "MGSSQSVEIPGGGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELRETSVTPSNMWGGQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTVMNESEDLFSLIETHEAKPLKLYVYNTDTDNCREVIITPNSAWGGEGSLGCGIGYGYLHRIPTRPFEEGKKISLPGQMTGTPITPLKDGFTEVQLSSVNPPSLSPPGTTEIEQGLSGLSISSTPPAVSNVLSTGVPTVPLLPPQVNQSLTSVPPMNPATTLPGLIPLPAGLPNLPTLPNLNLPAPIVPGVGLPELVNPGLPPLPSLPPRNLPGIAPLPLPTEFLPSFLVPEVSTAAGSGELLSSLPPASSPPSDPVPTSVRADAASALAVAVTPPTPKAPTTAEDRASESAPASEKPASAGTDANASESP", "length": 451, "header": "tr|A0A5G2QDE7-1|A0A5G2QDE7_PIG Isoform 1 of Golgi reassembly stacking protein 2 OS=Sus scrofa OX=9823 GN=GORASP2 PE=1 SV=1 CANONICAL=A0A5G2QDE7-1" }, "locus": { "chromosome": "15", "start_pos": 77129808, "end_pos": 77099493, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080881.1", "url": "https://www.ensembl.org/id/ENSSSCT00000080881.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062156.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062156.1" } ] } }, { "isoform_ac": "A0A5G2QEQ1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEQ1/entry", "sequence": { "sequence": "MGSSQSVEIPGGGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELRETSVTPSNMWGGQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTVMNESEDLFSLIETHEAKPLKLYVYNTDTDNCREVIITPNSAWGGEGSLGCGIGYGYLHRIPTRPFEEGKKISLPGQMTGTPITPLKDGFTEVQLSSVNPPSLSPPGTTEIEQGLSGLSISSTPPAVSNVLSTGVPTVPLLPPQVNQSLTSVPPMNPATTLPGLIPLPAGLPNLPTLPNLNLPAPIVPGVGLPELVNPGLPPLPSLPPRNLPGIAPLPLPTEFLPSFLWFQRSLPQQAQGSCCPPSRLPAAHPPTPSRPL", "length": 401, "header": "tr|A0A5G2QEQ1-1|A0A5G2QDE7_PIG Computationally mapped isoform of Golgi reassembly stacking protein 2 OS=Sus scrofa OX=9823 GN=GORASP2 PE=1 SV=1 CANONICAL=A0A5G2QDE7-1" }, "locus": { "chromosome": "15", "start_pos": 77129656, "end_pos": 77099493, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090245.1", "url": "https://www.ensembl.org/id/ENSSSCT00000090245.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063171.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063171.1" } ] } }, { "isoform_ac": "A0A5G2R6D3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6D3/entry", "sequence": { "sequence": "FLQVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELRETSVTPSNMWGGQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTVMNESEDLFSLIETHEAKPLKLYVYNTDTDNCREVIITPNSAWGGEGSLGCGIGYGYLHRIPTRPFEEGKKISLPGQMTGTPITPLKDGFTEVQLSSVNPPSLSPPGTTEIEQGLSGLSISSTPPAVSNVLSTGVPTVPLLPPQVNQSLTSVPPMNPATTLPGLIPLPAGLPNLPTLPNLNLPAPIVPGVGLPELVNPGLPPLPSLPPRNLPGIAPLPLPTEFLPSFLWFQRSLPQQAQGSCCPPSRLPAAHPPTPSRPL", "length": 383, "header": "tr|A0A5G2R6D3-1|A0A5G2QDE7_PIG Computationally mapped isoform of Golgi reassembly stacking protein 2 OS=Sus scrofa OX=9823 GN=GORASP2 PE=1 SV=2 CANONICAL=A0A5G2QDE7-1" }, "locus": { "chromosome": "15", "start_pos": 77129656, "end_pos": 77114493, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000086036.2", "url": "https://www.ensembl.org/id/ENSSSCT00000086036.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072639.2", "url": "https://www.ensembl.org/id/ENSSSCP00000072639.2" } ] } }, { "isoform_ac": "F1S1U5-1", "url": "https://www.uniprot.org/uniprotkb/F1S1U5/entry", "sequence": { "sequence": "MGSSQSVEIPGGGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELRETSVTPSNMWGGQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTVMNESEDLFSLIETHEAKPLKLYVYNTDTDNCREVIITPNSAWGGEGSLGCGIGYGYLHRIPTRPFEEGKKISLPGQMTGTPITPLKDGFTEVQLSSVNPPSLSPPGTTEIEQGLSGLSISSTPPAVSNVLSTGLIPLPAGLPNLPTLPNLNLPAPIVPGVGLPELVNPGLPPLPSLPPRNLPGIAPLPLPTEFLPSFLWFQRSLPQQAQGSCCPPSRLPAAHPPTPSRPL", "length": 372, "header": "tr|F1S1U5-1|A0A5G2QDE7_PIG Computationally mapped isoform of Golgi reassembly stacking protein 2 OS=Sus scrofa OX=9823 GN=GORASP2 PE=1 SV=4 CANONICAL=A0A5G2QDE7-1" }, "locus": { "chromosome": "15", "start_pos": 77129656, "end_pos": 77099493, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017360.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017360.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016896.4", "url": "https://www.ensembl.org/id/ENSSSCP00000016896.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 414, "start_aa": "Thr", "end_pos": 414, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr414", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEQ1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEQ1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-162658", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-162658", "resource": "Reactome", "description": "Golgi Cisternae Pericentriolar Stack Reorganization" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZZQ2-1", "protein_name": "Golgi reassembly stacking protein 2", "gene_name": "GORASP2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGASQSVEIPGGGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLVYSSKTLELRETSVTPSNMWGGQGLLGVSIRFCSFDGANENVWHVLEVEPNSPAALAGLRPHSDYIIGADTVMNETEDLFSLIETHEAKPLKLYVYNTDTDNCREVVITPNSAWGGEGSLGCGIGYGYLHRIPTRPFEEGKKISLPGQLPSASLSPLKDGFTEVQLSSVNPSPALPPGPAGLEQSLSGLSISSPSTTVSNVLSTAGVPTVPLLPPQVSQSLTSVPPVNPATTLPGLMPLPAGLPNLTDLSKLNLPAPHIVPEMVQPGMPTLPSLPPLNLMGITPPLMPPKCVPLLPLVTEVSTVPTDLLPTMTQAGSFSVDPGTTVNVEQTSPLTLDSATPTSKATIVDRSSESSAVNEKASSVTDTHASES", "length": 442 }, "evidence": [ { "id": "A0A5G2QDE7", "url": "https://omabrowser.org/oma/group/A0A5G2QDE7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q99JX3-1", "protein_name": "Golgi reassembly-stacking protein 2", "gene_name": "Gorasp2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSSQSVEIPGGGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELREASVTPSNLWGGQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTVMNESEDLFSLIETHEAKPLKLYVYNTDTDNCREVIITPNSAWGGEGSLGCGIGYGYLHRIPTRPFEEGKKISLPGQMTGTPITPLKDGFTEVQLSSVSPPSLSPPGTTGVEQSLSGLSISSAPPAVSNVLSTGVPTVPLLPPQVNQSLASMPPMNPATTLPSLMPLSAGLPSLPNLPSLSNFNLPAPHIMPGVGLPELGSPGLPPLPSLPPRNLPGIAPLPMLSDFLPSFPLVPEGSSAASAGEPLSSLPAMGPPSDPVMTTAKADASSLTVDVTSPASKVPTTVEDRVSDCTPAVEKPVSDADASEPS", "length": 451 }, "evidence": [ { "id": "A0A5G2QDE7", "url": "https://omabrowser.org/oma/group/A0A5G2QDE7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H8Y8-1", "protein_name": "Golgi reassembly-stacking protein 2", "gene_name": "GORASP2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGSSQSVEIPGGGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELRETSVTPSNLWGGQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTVMNESEDLFSLIETHEAKPLKLYVYNTDTDNCREVIITPNSAWGGEGSLGCGIGYGYLHRIPTRPFEEGKKISLPGQMAGTPITPLKDGFTEVQLSSVNPPSLSPPGTTGIEQSLTGLSISSTPPAVSSVLSTGVPTVPLLPPQVNQSLTSVPPMNPATTLPGLMPLPAGLPNLPNLNLNLPAPHIMPGVGLPELVNPGLPPLPSMPPRNLPGIAPLPLPSEFLPSFPLVPESSSAASSGELLSSLPPTSNAPSDPATTTAKADAASSLTVDVTPPTAKAPTTVEDRVGDSTPVSEKPVSAAVDANASESP", "length": 452 }, "evidence": [ { "id": "A0A5G2QDE7", "url": "https://omabrowser.org/oma/group/A0A5G2QDE7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9R064-1", "protein_name": "Golgi reassembly-stacking protein 2", "gene_name": "Gorasp2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGSSQSVEIPGGGTEGYHVLRVQENSPGHRAGLEPFFDFIVSISGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELREASVTPSNLWGGQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTVMNESEDLFSLIETHEAKPLKLYVYNTDTDNCREVIITPNSAWGGEGSLGCGIGYGYLHRIPTRPFEEGKKISLPGQMTGTPITPLKDGFTQVQLSSVSPPSLSPPGTAGVEQSLSGLSISSAPPAVSNVLSTGVPTVPLLPPQVNQSLASVPPMNPAATLPSLMPLSAGLPNLPNLPSLSNFNLPAPHIMPGVGLPELGKPGLPPLPSLPPRNVPGIAPLPMPSDFLPSFPLVPEGSSAASAGEPLSSLPAMGPPSDPVMTTAKADTSSLTVDVMSPASKVPTTVEDRVSDCTPAMEKPVSAVTDANASGAS", "length": 454 }, "evidence": [ { "id": "A0A5G2QDE7", "url": "https://omabrowser.org/oma/group/A0A5G2QDE7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDE7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDE7" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDE7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDE7" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDE7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDE7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDE7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDE7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "Golgi organization", "id": "GO:0007030", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007030", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDE7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDE7" } ], "pmid": "" }, { "name": "response to endoplasmic reticulum stress", "id": "GO:0034976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034976", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDE7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDE7" } ], "pmid": "" }, { "name": "establishment of protein localization to plasma membrane", "id": "GO:0061951", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061951", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDE7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDE7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 144, "end_pos": 146, "annotation": "n_glycosylation_sequon" }, { "start_pos": 287, "end_pos": 289, "annotation": "n_glycosylation_sequon" }, { "start_pos": 446, "end_pos": 448, "annotation": "n_glycosylation_sequon" }, { "start_pos": 44, "end_pos": 46, "annotation": "n_glycosylation_sequon" }, { "start_pos": 52, 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"https://www.ncbi.nlm.nih.gov/protein/XP_013851668" }, "gene_names": [ { "name": "NDUFAF7", "type": "recommended", "evidence": [ { "id": "A0A5G2QDK9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDK9" } ] }, { "name": "NDUFAF7", "type": "synonym", "evidence": [ { "id": "XP_013851668", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013851668" } ] } ], "protein_names": [ { "name": "Protein arginine methyltransferase NDUFAF7", "type": "recommended", "evidence": [ { "id": "A0A5G2QDK9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDK9/entry#names_and_taxonomy" } ] }, { "name": "2.1.1.320", "type": "synonym", "evidence": [ { "id": "A0A5G2QDK9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDK9/entry#names_and_taxonomy" } ] }, { "name": "protein arginine methyltransferase NDUFAF7, mitochondrial isoform X2", "type": "synonym", "evidence": [ { "id": "XP_013851668", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013851668" } ] } ], "function": [ { "annotation": "Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDY8", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDY8#function" }, { "database": "UniProtKB", "id": "RU364114", "url": "https://www.uniprot.org/uniprotkb/RU364114#function" }, { "database": "UniProtKB", "id": "A0A5G2QDK9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDK9#function" }, { "database": "UniProtKB", "id": "ARBA00054758", "url": "https://www.uniprot.org/uniprotkb/ARBA00054758#function" }, { "database": "UniProtKB", "id": "F1S4P7", "url": "https://www.uniprot.org/uniprotkb/F1S4P7#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDK9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDK9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NDUFAF7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDK9", "locus": { "chromosome": "3", "start_pos": 102938970, "end_pos": 102964165, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008494", "url": "https://www.ensembl.org/id/ENSSSCG00000008494" } ] } } ], "crossref": [ { "id": "A0A5G2QDK9", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QDK9", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000008494", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008494", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100522486", "url": "https://www.ncbi.nlm.nih.gov/gene/100522486", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003788", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003788", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029063", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029063", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038375", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038375", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100522486", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522486", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YYHPQRN", "url": "https://omabrowser.org/oma/group/YYHPQRN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QDK9", "url": "https://www.orthodb.org/?gene=A0A5G2QDK9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12049", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12049", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12049:SF7", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12049:SF7", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02636", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02636", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6799198", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6799198", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_013851668", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013851668", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "48108", "url": "https://www.rhea-db.org/rhea/48108", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QDK9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDK9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QDK9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDK9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDY8", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDY8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDY8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDY8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S4P7", "url": "https://www.uniprot.org/uniprotkb/F1S4P7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S4P7-1", "url": "https://www.uniprot.org/uniprotkb/F1S4P7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSVLARVAAGRLAAARAVIPCLWRGQYFSSGKEPAEDNSVTPMLRHLIYKIKSTGPITVAEYMREVLTNPAKGYYVTRDMLGEKGDFITSPEISQIFGELLGIWFISEWIATGKNAAFQLVELGPGRGTLSGDILRVFSQLGSVLKNCDISIHLVEVSQKLSEIQALTLTEEKVPLEREAGSPVYMKGVTKSGIPISWYRDLQDVPKGYSFYLAHEFFDVLPVHKFQKTPQGWREVLIDIDPQVSDKLRFVLAPCATPAEAFIQKDETRDHVEVCPDAGVIIQELAQRISLTGGAALIADYGHDGTKTDTFRGFCGHQLHDVLIAPGTADLTADVDFSYLRRMSQGKVASLGPISQQTFLRNMGIDVRLKILLDKSDEPSLREQLLQGYRMLMNPEKMGERFNFFALVPHQRLHGRHHQMNACQSKPSPSPVAGFGELVWR", "length": 441, "header": "tr|A0A5G2QDK9-1|A0A5G2QDK9_PIG Isoform 1 of Protein arginine methyltransferase NDUFAF7 OS=Sus scrofa OX=9823 GN=NDUFAF7 PE=1 SV=1 CANONICAL=A0A5G2QDK9-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QDK9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDK9/entry", "sequence": { "sequence": "MSVLARVAAGRLAAARAVIPCLWRGQYFSSGKEPAEDNSVTPMLRHLIYKIKSTGPITVAEYMREVLTNPAKGYYVTRDMLGEKGDFITSPEISQIFGELLGIWFISEWIATGKNAAFQLVELGPGRGTLSGDILRVFSQLGSVLKNCDISIHLVEVSQKLSEIQALTLTEEKVPLEREAGSPVYMKGVTKSGIPISWYRDLQDVPKGYSFYLAHEFFDVLPVHKFQKTPQGWREVLIDIDPQVSDKLRFVLAPCATPAEAFIQKDETRDHVEVCPDAGVIIQELAQRISLTGGAALIADYGHDGTKTDTFRGFCGHQLHDVLIAPGTADLTADVDFSYLRRMSQGKVASLGPISQQTFLRNMGIDVRLKILLDKSDEPSLREQLLQGYRMLMNPEKMGERFNFFALVPHQRLHGRHHQMNACQSKPSPSPVAGFGELVWR", "length": 441, "header": "tr|A0A5G2QDK9-1|A0A5G2QDK9_PIG Isoform 1 of Protein arginine methyltransferase NDUFAF7 OS=Sus scrofa OX=9823 GN=NDUFAF7 PE=1 SV=1 CANONICAL=A0A5G2QDK9-1" }, "locus": { "chromosome": "3", "start_pos": 102964127, "end_pos": 102948366, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076787.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076787.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061711.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061711.1" } ] } }, { "isoform_ac": "A0A8W4FDY8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDY8/entry", "sequence": { "sequence": "MSVLARPPGAAARAVIPCLWRGQYFSSGKEPAEDNSVTPMLRHLIYKIKSTGPITVAEYMREVLTNPAKLLGIWFISEWIATGKNAAFQLVELGPGRGTLSGDILRVFSQLGSVLKNCDISIHLVEKTPQGWREVLIDIDPQVSDKLRFVLAPCATPAEAFIQKDETRDHVEVCPDAGVIIQELAQRISLTGGAALIADYGHDGTKTDTFRGFCGHQLHDVLIAPGTADLTADVDFSYLRRMSQGKVASLGPISQQTFLRNMGIDVRLKILLDKSDEPSLREQLLQGYRMLMNPEKMGERFNFFALVPHQRLHGRHHQMNACQSKPSPSPVAGFGELVWR", "length": 340, "header": "tr|A0A8W4FDY8-1|A0A5G2QDK9_PIG Computationally mapped isoform of Protein arginine methyltransferase NDUFAF7 OS=Sus scrofa OX=9823 GN=NDUFAF7 PE=1 SV=1 CANONICAL=A0A5G2QDK9-1" }, "locus": { "chromosome": "3", "start_pos": 102964127, "end_pos": 102948366, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000100466.1", "url": "https://www.ensembl.org/id/ENSSSCT00000100466.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076525.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076525.1" } ] } }, { "isoform_ac": "F1S4P7-1", "url": "https://www.uniprot.org/uniprotkb/F1S4P7/entry", "sequence": { "sequence": "MSVLARVAAGRLAAARAVIPCLWRGQYFSSGKEPAEDNSVTPMLRHLIYKIKSTGPITVAEYMREVLTNPAKGYYVTRDMLGEKGDFITSPEISQIFGELLGIWFISEWIATGKNAAFQLVELGPGRGTLSGDILRVFSQLGSVLKNCDISIHLVEVSQKLSEIQALTLTEEKVPLEREAGSPVYMKGVTKSGIPISWYRDLQDVPKGYSFYLAHEFFDVLPVHKFQKTPQGWREVLIDIDPQVSDKLRFVLAPCATPAEAFIQKDETRDHVEVCPDAGVIIQELAQRISLTGGAALIADYGHDGTKTDTFRGFCGHQLHDVLIAPGTADLTADVDFSYLRRMSQGKVASLGPISQQTFLRNMGIDVRLKMTIYREQHLCSKISVHNMKSFLNEVISSLIIKDLLPCHLDWEP", "length": 413, "header": "tr|F1S4P7-1|A0A5G2QDK9_PIG Computationally mapped isoform of Protein arginine methyltransferase NDUFAF7 OS=Sus scrofa OX=9823 GN=NDUFAF7 PE=1 SV=3 CANONICAL=A0A5G2QDK9-1" }, "locus": { "chromosome": "3", "start_pos": 102964127, "end_pos": 102941289, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000009296.5", "url": "https://www.ensembl.org/id/ENSSSCT00000009296.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000009060.4", "url": "https://www.ensembl.org/id/ENSSSCP00000009060.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 257, "start_aa": "Thr", "end_pos": 257, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr257", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDY8", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDY8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100522486", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522486", "resource": "KEGG Pathway" }, { "id": "R-SSC-6799198", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6799198", "resource": "Reactome", "description": "Complex I biogenesis" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0XS06-1", "protein_name": "Protein arginine methyltransferase NDUFAF7", "gene_name": "NDUFAF7", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQPIMPPPPACRALLATALGLAGRHRLPCHRAPLAARLSSGAGGEVEAAGSGEAGGVLRHLLLKLRATGPVTVAEYMREALTNPGQGYYTRRGGVGEDFITSPEISQIFGELIGIWYISEWMAMGKQNAFQLVELGPGMGTLTGDILRVFNQLASLLSKCDVSIHLVEVSPKLSAIQAEMLTGGKVQSNPENKSAYMKGISKTGIPIYWYRDIQDVPQGYSFYLAHEFLDALPIHKFQRTEKGWHEVLVDIDPEVPDQLRFVLSPSRTPATENFIQPEETRDHVEVCPEAGVLIQRLACRIEKDGGAALIADYGHDGTKTDTFRGFRNHKLHDVLKAPGTADLTADVDFSYLRKMAEGRTATLGPIKQREFLKNMGIDLRLQVLLQHSRDSATHEQLLHSFDMLMNPKKMGDCFHFFALLPHHRVVRPTKKDNPQSKSPLPPVAGFGELSLK", "length": 452 }, "evidence": [ { "id": "A0A5G2QDK9", "url": "https://omabrowser.org/oma/group/A0A5G2QDK9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1MJQ5-1", "protein_name": "Protein arginine methyltransferase NDUFAF7", "gene_name": "NDUFAF7", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNFLAAAGVRRLCAMRAVLPCLWRGKYFSSGNEPAENNTVTPMLRHLIYKIKSTGPITVAEYMKEVLTNPAKGYYMNRDMLGEEGDFITSPEISQMFGELLGIWFISEWIAAGKNAAFQLVELGPGKGTLLGDILRVFSQLGSLLKNCDISLHLVEVSQKLSEIQALTLTEEKVPLERNAESPVYMKGVTKSGIPVSWYRDLQDVPKEYSFYLAHEFFDVLPVHKFQKTPHGWREVLVDIDPQVSDKLRFVLAPCATPAEAFIQNDETRDHVEVCPEAGVVIQELSQRISLTGGAALIADYGHDGTKTDTFRGFCGHRLHDVLTAPGTADLTADVDFSYLRRMSQGKVASLGPVEQQTFLRNMGIDVRLKILLDKTDDPSLRQQLLQGYNMLMNPMKMGERFNFLALVPHQRLHGRNHQTNARQSKPSPSPVAGFGELAWQ", "length": 441 }, "evidence": [ { "id": "A0A5G2QDK9", "url": "https://omabrowser.org/oma/group/A0A5G2QDK9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q08BY0-1", "protein_name": "Protein arginine methyltransferase NDUFAF7, mitochondrial", "gene_name": "ndufaf7", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRTLLRLKRLMPEVLWTKRSCSSSSINKSILKHLASKIIATGPISVAEYMREALTNPVLGYYVKNDMLGAGGDFITSPEISQIFGELLGVWCISEWMAAGKSSALQLVELGPGRGSLTSDILRVFSQLKGVLGETGISIHLVEVSPKLSQVQAECLTGNQTQTYDNNHTFYRSGTTCTGLPIYWYHSIEDVPRGFSIFLAHEFFDALPIHKFQRTENGWREVLVDIDPENPGKLRFVVSHRPTLASSTLIQKDESRRHVEVCAEAGVIVQKLASRIAEDGGAALIVDYGHDGTKTDTFRGFKGHQIHDVLEAPGLADLTADVDFSYLRKMAGDQVICLGPITQRSFLKNMGIDSRMQVLLSSNDPSIRAQLIHSYDMLINPEKMGERFQFFSVLNTARLAQREQMQKSTVMPVAGFTELEMQ", "length": 422 }, "evidence": [ { "id": "A0A5G2QDK9", "url": "https://omabrowser.org/oma/group/A0A5G2QDK9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q54S83-1", "protein_name": "Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial", "gene_name": "midA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFRSITQRVIRNNCYKQSTKSITSSTSFINNSLSYTTTSNENDIKDKNEEHDHRAKGKGRELLLSFDKSGLAQFPKQVFKNRKYPITDFEKYLQDITKVRGPMSIDTFIKEVLTNPKYGYYMNKDVFGKGGDFITAPEVSQLFGEMIGIWCVATWEAMGKPKKLQIVEMGPGRGTLMKDILRSTKVFKEFYDSISVHLVEASPANKKTQKQNLLYFKDKAINFDHKTIGETPNGIKVTWVGKLEEVPTDIPTLFLAQEFFDALPIHVFRFSREKNDWCEVLVDEDITEHGEYYLRFVQSKGPTLMTTAVKHLLPEFGLDGYQVELGLAGLAISQQIANRIDKSGGAALIIDYGYDKIVKSSLQAIRDHEFVDILDKPGTADLSVWVDFQTIRKTVKLLKNKSTAIGPVDQGIFLKEMGIEHRLAQIGRKLDSNEKFEELVMGYKKLVDPKEMGTNYKVITICDKNITPIGFSTSKTYDDEDLMI", "length": 484 }, "evidence": [ { "id": "A0A5G2QDK9", "url": "https://omabrowser.org/oma/group/A0A5G2QDK9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q5XI79-1", "protein_name": "Protein arginine methyltransferase NDUFAF7, mitochondrial", "gene_name": "Ndufaf7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNALVRRCVARTGIPSIWRRKCFSSGNEPAESNHVTPMLRHLMYKIKSTGPITVAEYMKEVLTNPAKGYYVHHDMLGEKGDFITSPEISQIFGELLGVWFVSEWMASGKSTAFQLVELGPGRGTLTADILRVFSQLGSVLKTCDISIHLVEVSQKLSEIQALTLTEETVPLERDAESLVYMKGVTKSGIPISWYRDLKDVPTGYSFYLAHEFFDVLPVHKFQKTPHGWREVFVDIDPQSPDKLRFVLAPCATPAEAFIQRDERREHVEVCPDAGVVIQELSQRIASTGGAALIADYGHDGTKTDTLRGFYEHQLHDVLTAPGTADLTADVDFSYLRRMAQGRVASLGPVEQRTFLKNMGIDVRLKVLLDKAGDPSLQQQLLRGYDMLMNPQKMGERFHFFALLPHQRLHVGSQGGKACQSEAPSTSVPGFDELVWH", "length": 436 }, "evidence": [ { "id": "A0A5G2QDK9", "url": "https://omabrowser.org/oma/group/A0A5G2QDK9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7L592-1", "protein_name": "Protein arginine methyltransferase NDUFAF7, mitochondrial", "gene_name": "NDUFAF7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSVLLRSGLGPLCAVARAAIPFIWRGKYFSSGNEPAENPVTPMLRHLMYKIKSTGPITVAEYMKEVLTNPAKGYYVYRDMLGEKGDFITSPEISQIFGELLGIWFISEWMATGKSTAFQLVELGPGRGTLVGDILRVFTQLGSVLKNCDISVHLVEVSQKLSEIQALTLTKEKVPLERNAGSPVYMKGVTKSGIPISWYRDLHDVPKGYSFYLAHEFFDVLPVHKFQKTPQGWREVFVDIDPQVSDKLRFVLAPSATPAEAFIQHDETRDHVEVCPDAGVIIEELSQRIALTGGAALVADYGHDGTKTDTFRGFCDHKLHDVLIAPGTADLTADVDFSYLRRMAQGKVASLGPIKQHTFLKNMGIDVRLKVLLDKSNEPSVRQQLLQGYDMLMNPKKMGERFNFFALLPHQRLQGGRYQRNARQSKPFASVVAGFSELAWQ", "length": 441 }, "evidence": [ { "id": "A0A5G2QDK9", "url": "https://omabrowser.org/oma/group/A0A5G2QDK9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9CWG8-1", "protein_name": "Protein arginine methyltransferase NDUFAF7, mitochondrial", "gene_name": "Ndufaf7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNALVRRCVARAGLPCIWRGKCYSSGNEPAESNQVTPMLRHLMYKIKSTGPITVAEYMKEVLTNPAKGYYVHQDMLGEKGDFITSPEISQIFGELLGVWFVSEWIASGKSPAFQLVELGPGRGTLTADILRVFSQLGSVLKTCAISIHLVEVSQKLSEIQALTLAEEKVPLERDAESLVYMKGVTKSGIPVSWYRDLKDVPEGYSLYLAHEFFDVLPVHKFQKTPRGWREVFVDVDPQASDKLRFVLAPCATPAEAFIQRDERREHVEVCPDAGVIIQELSQRIASTGGAALIADYGHDGTKTDTLRGFYGHQLHDVLIAPGTADLTADVDFSYLRRMAQGKVASLGPVEQRTFLKNMGIDVRLKVLLDKAGEPSAKQQLLGGYDMLMNPQKMGERFHFFALLPHQRLHGGSQERNACQSKTPSSSVAGFDELVWQ", "length": 436 }, "evidence": [ { "id": "A0A5G2QDK9", "url": "https://omabrowser.org/oma/group/A0A5G2QDK9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9VGR2-1", "protein_name": "Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial", "gene_name": "", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MLREALRIGNRRWYSYKSVRRPNLGATGTPKMEPPKEQPEASSKAESGHGSLAKQLRAKILSTGPIPVAEYMREVLTNPQAGYYMNRDVFGREGDFITSPEISQIFGELVGIWLVSEWRKMGSPSPFQLVELGPGRGTLARDVLKVLTKFKQDAEFSMHMVEVSPFLSKAQAQRFCYSHQTLPEDAQLPHYQEGTTASGTKAFWHRRLEDVPQGFSLVLAHEFFDALPVHKLQLVDGKWQEVLIDVASSDGAQEASFRYVLSRSQTPVSSLYRPLPGETRSCLEHSLETERQVGLLAERIERDGGIALIMDYGHFGEKTDTFRAFKQHKLHDPLVEPGSADLTADVDFKLVRHIAETRGNVHCCGPVEQGLFLQRMQGEARLEQLLAHALPENQEIIRSGYEMLTDPAQMGTRFKFLAMFPGVLAAHLDKYPVVGFS", "length": 437 }, "evidence": [ { "id": "A0A5G2QDK9", "url": "https://omabrowser.org/oma/group/A0A5G2QDK9/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDK9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDK9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "enzyme binding", "id": "GO:0019899", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019899", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDK9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDK9" } ], "pmid": "" }, { "name": "protein-arginine omega-N symmetric methyltransferase activity", "id": "GO:0035243", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035243", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDK9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDK9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "mitochondrial respiratory chain complex I assembly", "id": "GO:0032981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032981", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDK9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDK9" } ], "pmid": "" }, { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDK9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDK9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "48108", "name": "", "equation": "L-arginyl-[protein] + 2 S-adenosyl-L-methionine = N(omega),N(omega)'-dimethyl-L-arginyl-[protein] + 2 S-adenosyl-L-homocysteine + 2 H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "48108", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/48108" } ] }, { "id": "R-SSC-6799179", "name": "Peripheral arm subunits bind the 815kDa complex to form a 980kDa complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial inner membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6799179", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6799179" } ] }, { "id": "R-SSC-6799191", "name": "Intermediate 2 binds MT-ND1:NDUFAF5:NDUFAF6 to form a 315kDa subcomplex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial inner membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6799191", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6799191" } ] }, { "id": "R-SSC-6799196", "name": "The MCIA complex, NDUFAF2-7 all dissociate from the 980kDa complex, resulting in Complex I", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial inner membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6799196", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6799196" } ] }, { "id": "R-SSC-6799202", "name": "The 315kDa subcomplex binds the 370kDa subcomplex to form the 550kDa complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial inner membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6799202", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6799202" } ] }, { "id": "R-SSC-6799203", "name": "IP subcomplex binds NDUFAF3, NDUFAF4, TIMMDC1 to form Intermediate 1", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial inner membrane, mitochondrial matrix", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6799203", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6799203" } ] }, { "id": "R-SSC-6800868", "name": "NDUF subunits bind to form the IP subcomplex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6800868", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6800868" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QDK9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 441, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QDK9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QDK9" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": 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"total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", 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"name": "olfactory receptor 52A1-like", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005653696" }, "gene_names": [ { "name": "LOC100519554", "type": "synonym", "evidence": [ { "id": "XP_005653696", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005653696" } ] } ], "protein_names": [ { "name": "Olfactory receptor", "type": "recommended", "evidence": [ { "id": "A0A5G2QDL6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDL6/entry#names_and_taxonomy" } ] }, { "name": "olfactory receptor 52A1-like", "type": "synonym", "evidence": [ { "id": "XP_005653696", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005653696" } ] } ], "function": [ { "annotation": "Odorant receptor.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDL6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDL6#function" }, { "database": "UniProtKB", "id": "ARBA00002936", "url": "https://www.uniprot.org/uniprotkb/ARBA00002936#function" } ] }, { "annotation": "Putative odorant or sperm cell receptor.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDL6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDL6#function" }, { "database": "UniProtKB", "id": "ARBA00003929", "url": "https://www.uniprot.org/uniprotkb/ARBA00003929#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDL6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDL6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDL6", "locus": {} } ], "crossref": [ { "id": "A0A5G2QDL6", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QDL6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000041678", 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Classification" ] }, { "id": "ssc:100519554", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519554", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HTFQGME", "url": "https://omabrowser.org/oma/group/HTFQGME/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QDL6", "url": "https://www.orthodb.org/?gene=A0A5G2QDL6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR26450", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR26450", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR26450:SF98", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR26450:SF98", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13853", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13853", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005653696", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005653696", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QDL6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDL6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QDL6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDL6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSISNVTILTPSVLTLTGIPGLESVQSWIGIPFCAMYLTAVLGNSWLLSIIRSERSLREPMYLFLGMLAATDIALSTSIVPKMLGIFWFHVSEIYFDACLLQMWLIHTFQGIESGILLAMALDRYVAICSPLRHAAIFTQQLVTQIGAVVTLRAAIIVAPCLVLIKCRLHFYHTTVISHSYCEHMAIVKLAAENVQVNKIYGLFVAFTVAGFDLTVITLSYVEIFMAVFRLPQKEARLKAVHTCIPHICVFLQFYLLAFFSFFTHRFGGHIPPYIHILFSSIYLVVPPCLNPLVYGAKTKQIRIHVTKMLCS", "length": 312, "header": "tr|A0A5G2QDL6-1|A0A5G2QDL6_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A5G2QDL6-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QDL6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDL6/entry", "sequence": { "sequence": "MSISNVTILTPSVLTLTGIPGLESVQSWIGIPFCAMYLTAVLGNSWLLSIIRSERSLREPMYLFLGMLAATDIALSTSIVPKMLGIFWFHVSEIYFDACLLQMWLIHTFQGIESGILLAMALDRYVAICSPLRHAAIFTQQLVTQIGAVVTLRAAIIVAPCLVLIKCRLHFYHTTVISHSYCEHMAIVKLAAENVQVNKIYGLFVAFTVAGFDLTVITLSYVEIFMAVFRLPQKEARLKAVHTCIPHICVFLQFYLLAFFSFFTHRFGGHIPPYIHILFSSIYLVVPPCLNPLVYGAKTKQIRIHVTKMLCS", "length": 312, "header": "tr|A0A5G2QDL6-1|A0A5G2QDL6_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A5G2QDL6-1" }, "locus": { "chromosome": "9", "start_pos": 4918867, "end_pos": 4917932, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071013.1", "url": "https://www.ensembl.org/id/ENSSSCT00000071013.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061721.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061721.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig 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"A0A3Q1MBY9-1", "protein_name": "Olfactory receptor", "gene_name": "OR52A1E", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSISNVTIFMPSVLTLIGIPGLESVQCWIGIPFCAMYLIAMIGNFLLLIIIISEHSLHQPMYIFLGMLGVTDIALSTSIVPKMLGIFWFHVTEIYFDSCLLQMWLIHTFQCTESGILLAMALDRYVAICYPLRHAAIFSHQLVTQIAAMVTLRAAILVAPCLVLIRFRLQFYHTTVISHSYCEHMAVVKLAAENIRVNKIYGLFVAFTVAGLDIVLIMLSYIQIFITVFRLPQKEARLKAFNTCVAHICVFLQFYSLGFFSFFAHRFGSHIPPYIHILFSSTYLLVPPFLNPLVYGAKTKQIRVPMVKIFCSKNLL", "length": 316 }, "evidence": [ { "id": "A0A5G2QDL6", "url": "https://omabrowser.org/oma/group/A0A5G2QDL6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9UKL2-1", "protein_name": "Olfactory receptor 52A1", "gene_name": "OR52A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QDS6-1", "uniprot_ac": "A0A5G2QDS6", "uniprot_id": "A0A5G2QDS6_PIG", "mass": { "chemical_mass": 63312.0, "monoisotopic_mass": 63312.0 }, "refseq": { "ac": "XP_003481127", "name": "nitrogen permease regulator 3-like protein isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003481127" }, "gene_names": [ { "name": "NPRL3", "type": "recommended", "evidence": [ { "id": "A0A5G2QDS6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDS6" } ] }, { "name": "NPRL3", "type": "synonym", "evidence": [ { "id": "XP_003481127", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003481127" } ] } ], "protein_names": [ { "name": "GATOR complex protein NPRL3", "type": "recommended", "evidence": [ { "id": "A0A5G2QDS6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDS6/entry#names_and_taxonomy" } ] }, { "name": "Nitrogen permease regulator 3-like protein", "type": "synonym", "evidence": [ { "id": "A0A5G2QDS6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDS6/entry#names_and_taxonomy" } ] }, { "name": "nitrogen permease regulator 3-like protein isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003481127", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003481127" } ] } ], "function": [ { "annotation": "As a component of the GATOR1 complex functions as an inhibitor of the amino acid-sensing branch of the TORC1 pathway.", "evidence": [ { "database": "UniProtKB", "id": "F1RGW2", "url": "https://www.uniprot.org/uniprotkb/F1RGW2#function" }, { "database": "UniProtKB", "id": "RU368069", "url": "https://www.uniprot.org/uniprotkb/RU368069#function" }, { "database": "UniProtKB", "id": "F1RGW4", "url": "https://www.uniprot.org/uniprotkb/F1RGW4#function" }, { "database": "UniProtKB", "id": "A0A5G2QDS6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDS6#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDS6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDS6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NPRL3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDS6", "locus": { "chromosome": "3", "start_pos": 41540717, "end_pos": 41479193, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000007981", "url": "https://www.ensembl.org/id/ENSSSCG00000007981" } ] } } ], "crossref": [ { "id": "A0A5G2QDS6", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QDS6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000007981", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000007981", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100521441", "url": "https://www.ncbi.nlm.nih.gov/gene/100521441", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR005365", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005365", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008979", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008979", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056603", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056603", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "CNLAFRY", "url": "https://omabrowser.org/oma/group/CNLAFRY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QDS6", "url": "https://www.orthodb.org/?gene=A0A5G2QDS6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13153", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13153", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13153:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13153:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03666", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03666", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24064", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24064", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-9639288", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9639288", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003481127", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003481127", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QDS6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDS6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QDS6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDS6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RGW2", "url": "https://www.uniprot.org/uniprotkb/F1RGW2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RGW2-1", "url": "https://www.uniprot.org/uniprotkb/F1RGW2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RGW4", "url": "https://www.uniprot.org/uniprotkb/F1RGW4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RGW4-1", "url": "https://www.uniprot.org/uniprotkb/F1RGW4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGDNTSPISVILVSSGSRGNKLLFRYPFQRSQEHPASQTTKPRSRYAVNSTGEHAEDQDGDSRFSDVILATILATKSEMCGQKFELKIDNVRFVGHPTLLQHALGQVSKTDPSPKREAPTMILFNVVFALRANADPSVISCLHNLSRRIATVLQHEERRCQYLTREAKLILALQDEVSAMADAPDGPQSPFHHILPKCKLARDLKDAYDSLCTSGVVRLHVNSWLEVSFCLPHKIHYAAASLIPPEAIERSLKAIRPYHALLLLSDEKTLLGELPLDCSPALVRVIKTTSAMKNLQQLAQDADLALLQVFQLAAHLVYWGKAIVIYPLCENNVYMLSPHASVCLFSPLAEHFSRQFPPHDLPSVLAKFSLPISLSELRNPLAPPVQETQLIQMVVWMLQRRLLVQLHTYVCLMASPGEDEPRSREDDMPLSTRAGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNRRVTESLLASLSEHERAAILSVPAAQNPEDLRMFARLLHYFRGRHHLEEIMYNENTRRSQLLALVDKFRSVLVVTSHEDPVIAVFQALLT", "length": 569, "header": "tr|A0A5G2QDS6-1|A0A5G2QDS6_PIG Isoform 1 of GATOR complex protein NPRL3 OS=Sus scrofa OX=9823 GN=NPRL3 PE=3 SV=2 CANONICAL=A0A5G2QDS6-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QDS6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDS6/entry", "sequence": { "sequence": "MGDNTSPISVILVSSGSRGNKLLFRYPFQRSQEHPASQTTKPRSRYAVNSTGEHAEDQDGDSRFSDVILATILATKSEMCGQKFELKIDNVRFVGHPTLLQHALGQVSKTDPSPKREAPTMILFNVVFALRANADPSVISCLHNLSRRIATVLQHEERRCQYLTREAKLILALQDEVSAMADAPDGPQSPFHHILPKCKLARDLKDAYDSLCTSGVVRLHVNSWLEVSFCLPHKIHYAAASLIPPEAIERSLKAIRPYHALLLLSDEKTLLGELPLDCSPALVRVIKTTSAMKNLQQLAQDADLALLQVFQLAAHLVYWGKAIVIYPLCENNVYMLSPHASVCLFSPLAEHFSRQFPPHDLPSVLAKFSLPISLSELRNPLAPPVQETQLIQMVVWMLQRRLLVQLHTYVCLMASPGEDEPRSREDDMPLSTRAGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNRRVTESLLASLSEHERAAILSVPAAQNPEDLRMFARLLHYFRGRHHLEEIMYNENTRRSQLLALVDKFRSVLVVTSHEDPVIAVFQALLT", "length": 569, "header": "tr|A0A5G2QDS6-1|A0A5G2QDS6_PIG Isoform 1 of GATOR complex protein NPRL3 OS=Sus scrofa OX=9823 GN=NPRL3 PE=3 SV=2 CANONICAL=A0A5G2QDS6-1" }, "locus": { "chromosome": "3", "start_pos": 41540165, "end_pos": 41506613, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090017.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090017.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062298.2", "url": "https://www.ensembl.org/id/ENSSSCP00000062298.2" } ] } }, { "isoform_ac": "F1RGW2-1", "url": "https://www.uniprot.org/uniprotkb/F1RGW2/entry", "sequence": { "sequence": "MILGSAPWRPGDSLTSNSDLSPPAPQRPHTGAGASLSGDLFIDMHRPGPVVAEATRRTQRYFSVSTTATPIRNLSQAACISTVNSPCRWDASTTWKHWISSCGREAAKPRSRYAVNSTGEHAEDQDGDSRFSDVILATILATKSEMCGQKFELKIDNVRFVGHPTLLQHALGQANADPSVISCLHNLSRRIATVLQHEERRCQYLTREAKLILALQDEVSAMADAPDGPQSPFHHILPKCKLARDLKDAYDSLCTSGVVRLHVNSWLEVSFCLPHKIHYAAASLIPPEAIERSLKAIRPYHALLLLSDEKTLLGELPLDCSPALVRVIKTTSAMKNLQQLAQDADLALLQVFQLAAHLVYWGKAIVIYPLCENNVYMLSPHASVCLFSPLAEHFSRQFPPHDLPSVLAKFSLPISLSELRNPLAPPVQETQLIQMVVWMLQRRLLVQLHTYVCLMASPGEDEPRSREDDMPLSTRAGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNRRVTESLLASLSEHERAAILSVPAAQNPEDLRMFARLLHYFRGRHHLEEIMYNENTRRSQLLALVDKFRSVLVVTSHEDPVIAVFQALLT", "length": 611, "header": "tr|F1RGW2-1|A0A5G2QDS6_PIG Computationally mapped isoform of GATOR complex protein NPRL3 OS=Sus scrofa OX=9823 GN=NPRL3 PE=3 SV=4 CANONICAL=A0A5G2QDS6-1" }, "locus": { "chromosome": "3", "start_pos": 41540165, "end_pos": 41489212, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008745.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008745.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008521.4", "url": "https://www.ensembl.org/id/ENSSSCP00000008521.4" } ] } }, { "isoform_ac": "F1RGW4-1", "url": "https://www.uniprot.org/uniprotkb/F1RGW4/entry", "sequence": { "sequence": "MGDNTSPISVILVSSGSRGNKLLFRYPFQRSQEHPASQTRCCWSTLVAQWVKDPLLSLQGPRCCCSPRTFTCQGDSLASQETKPRSRYAVNSTGEHAEDQDGDSRFSDVILATILATKSEMCGQKFELKIDNVRFVGHPTLLQHALGQVSKTDPSPKREAPTMILFNVVFALRANADPSVISCLHNLSRRIATVLQHEERRCQYLTREAKLILALQDEVSAMADAPDGPQSPFHHILPKCKLARDLKDAYDSLCTSGVVRLHVNSWLEVSFCLPHKIHYAAASLIPPEAIERSLKAIRPYHALLLLSDEKTLLGELPLDCSPALVRVIKTTSAMKNLQQLAQDADLALLQVFQLAAHLVYWGKAIVIYPLCENNVYMLSPHASVCLFSPLAEHFSRQFPPHDLPSVLAKFSLPISLSELRNPLAPPVQETQLIQMVVWMLQRRLLVQLHTYVCLMASPGEDEPRSREDDMPLSTRAGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNRRVTESLLASLSEHERAAILSVPAAQNPEDLRMFARLLHYFRGRHHLEEIMYNENTRRSQLLALVDKFRSVLVVTSHEDPVIAVFQALLT", "length": 611, "header": "tr|F1RGW4-1|A0A5G2QDS6_PIG Computationally mapped isoform of GATOR complex protein NPRL3 OS=Sus scrofa OX=9823 GN=NPRL3 PE=3 SV=3 CANONICAL=A0A5G2QDS6-1" }, "locus": { "chromosome": "3", "start_pos": 41540165, "end_pos": 41506613, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008744.4", "url": "https://www.ensembl.org/id/ENSSSCT00000008744.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008520.3", "url": "https://www.ensembl.org/id/ENSSSCP00000008520.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1RGW2", "url": "https://www.uniprot.org/uniprotkb/F1RGW2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-9639288", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9639288", "resource": "Reactome", "description": "Amino acids regulate mTORC1" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6AV56-1", "protein_name": "GATOR complex protein NPRL3", "gene_name": "Nprl3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGDNTSPISVILVSSGSRGNKLLFRYPFQRSQEHPASQTNKPRSRYAVNNTGEHVDDQDGDSSKPCPPTDEQLVAGFSDAILATILATKSEMCGQKFELKIDNVRFVGHPTLLQHALGQVSKTDPSPKREAPTMILFNVVFALRANADPSVINCLHTLSRRIATVLQHEERRCQYLTREAKLILALQDEVSAMADANEGPQSPFHHILPKCKLARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKIHYAASSLIPPEAIERSLKAIRPYHALLLLSDEKSLLSELPIDCSPALVRVIKTTSAVKNLQQLAQDADLALLQVFQLAAHLVYWGKAVIIYPLCENNVYVLSPNASVCLYSPLAEQFSRQFPSHDLPSVLAKFSLPVSLSEFRSPLAPPAQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEEEPRPREDDVPFTARVGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNKRMTENLLASLSEHERAAILNVPAAQNPEDLRMFARLLHYFRGRHHLEEIMYNENTRRSQLLMLFDKFRSVLVVTTHEDPVIAVFQALLT", "length": 582 }, "evidence": [ { "id": "A0A5G2QDS6", "url": "https://omabrowser.org/oma/group/A0A5G2QDS6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A9J7JUB2-1", "protein_name": "GATOR complex protein NPRL3", "gene_name": "Nprl3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGDNTSPISVILVSSGSRGNKLLFRYPFQRSQEHPASQTNKPRSRYAVNNTGEHIDDQDGDSSKPCPPTDEQLVAGFSDVILATILATKSEMCGQKFELKIDNVRFVGHPTLLQHALGQVSKTDPSPKREAPTMILFNVVFALRANADPSVINCLHNLSRRIATVLQHEERRCQYLTREAKLILALQDEVSAMADANEGPQSPFHHILPKCKLARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKIHYAASSLIPPEAIERSLKAIRPYHALLLLSDEKSLLGELPIDCSPALVRVIKTTSAVKNLQQLAQDADLALLQVFQLAAHLVYWGKAVIIYPLCENNVYVLSPNASVCLYSPLAEQFSRQFPSHDLPSILAKFSLPVSLSEFRSPLAPPAQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEEEPRLREDDVPFTARVGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNKRMTENLLASLSEHERAAILSVPAAQNPEDLRMFARLLHYFRGRHHLEEIMYNENTRRSQLLTLFDKFRSVLVVTTHEDPVIAVFQALLT", "length": 582 }, "evidence": [ { "id": "A0A5G2QDS6", "url": "https://omabrowser.org/oma/group/A0A5G2QDS6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q12980-1", "protein_name": "GATOR1 complex protein NPRL3", "gene_name": "NPRL3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRDNTSPISVILVSSGSRGNKLLFRYPFQRSQEHPASQTSKPRSRYAASNTGDHADEQDGDSRFSDVILATILATKSEMCGQKFELKIDNVRFVGHPTLLQHALGQISKTDPSPKREAPTMILFNVVFALRANADPSVINCLHNLSRRIATVLQHEERRCQYLTREAKLILALQDEVSAMADGNEGPQSPFHHILPKCKLARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKIHYAASSLIPPEAIERSLKAIRPYHALLLLSDEKSLLGELPIDCSPALVRVIKTTSAVKNLQQLAQDADLALLQVFQLAAHLVYWGKAIIIYPLCENNVYMLSPNASVCLYSPLAEQFSHQFPSHDLPSVLAKFSLPVSLSEFRNPLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEEEPRPREDDVPFTARVGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNQRMTENLLASLSEHERAAILSVPAAQNPEDLRMFARLLHYFRGRHHLEEIMYNENTRRSQLLMLFDKFRSVLVVTTHEDPVIAVFQALLP", "length": 569 }, "evidence": [ { "id": "A0A5G2QDS6", "url": "https://omabrowser.org/oma/group/A0A5G2QDS6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8VIJ8-1", "protein_name": "GATOR1 complex protein NPRL3", "gene_name": "Nprl3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGDNTSPISVILVSSGSRGNKLLFRYPFQRSQEHPASQTNKPRSRYAVNNTGEHADDQDGDSRFSDVILATILATKSEMCGQKFELKIDNVRFVGHPTLLQHALGQVSKTDPSPKREAPTMILFNVVFALRANADPSVINCLHNLSRRIATVLQHEERRCQYLTREAKLILALQDEVSAMADANEGPQSPFQHILPKCKLARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKIHYAASSLIPPEAIERSLKAIRPYHALLLLSDEKSLLSELPIDCSPALVRVIKTTSAVKNLQQLAQDADLALLQVFQLAAHLVYWGKAVIIYPLCENNVYVMSPNASVCLYSPLAEQFSRQFPSHDLPSVLAKFSLPVSLSEFRSPLAPPAQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEEEPRLREDDVPFTARVGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNKRMTENLLASLSEHERAAILNVPAAQNPEDLRMFARLLHYFRGRHHLEEIMYNENTRRSQLLMLFDKFRSVLVVTTHEDPVIAVFQALLT", "length": 569 }, "evidence": [ { "id": "A0A5G2QDS6", "url": "https://omabrowser.org/oma/group/A0A5G2QDS6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9VUB4-1", "protein_name": "GATOR complex protein NPRL3", "gene_name": "Nprl3", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "METNVNPLAVILVYFDSKGDRLLYRYPYQTLGQTEVANDEQRKSRKRNPYAVANTDDLLQTPTHLGAAKSQGQLQGFADEVLSALFAVKPQLCNQKFELKLNDVRFVSHPTLIPQKEQRSGPMAKQQMLINIVFALHAQASYSIVKCYHELSKRLGLALKFEEQRSGYLTEQTAQMARTHDEQQQQPLERTLELIAERCSLAQALRSIFHDLCTTGLLSTSLNHNLTLCFCLPAKAHQLHKKGSMVDPETIDRCLRALKPYHGMLLLVDFAELLDCVPPTGARMLWQLVDVYDPLISLQSMSSNADLSIEHVYKLVSHLVYWAKATIIYPLCETNVYVIAPDAPLHTKSHLVEKFSARFAGMSLFEVISDFSLPTSIGHLTTPLQQPARQGILAQMVIWMLQHHLLMQLHTYVQFMPSEDEFGDSASCSNHLRDAISDEEGDQEPDADELHGSMLSMSSHPLPVPAVLVGGHRREASEDHSSLASDNIAVQPSSSHKSNFSITASMSTDNCDSLDSMEDEQKLKELLQVFSDADRAAIRRIPASANVDDLSLLVKLYQMGYFKSEHHLEEIMYFENLRRSQLLQLLDKFRDVLIIYETEDPAIASMYNTK", "length": 610 }, "evidence": [ { "id": "A0A5G2QDS6", "url": "https://omabrowser.org/oma/group/A0A5G2QDS6/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "lysosome", "id": "GO:0005764", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005764", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDS6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDS6" } ], "pmid": "" }, { "name": "GATOR1 complex", "id": "GO:1990130", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990130", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDS6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDS6" } ], "pmid": "" }, { "name": "lysosomal membrane", "id": "GO:0005765", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005765", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDS6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDS6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "positive regulation of autophagy", "id": "GO:0010508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010508", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDS6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDS6" } ], "pmid": "" }, { "name": "cellular response to amino acid starvation", "id": "GO:0034198", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034198", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDS6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDS6" } ], "pmid": "" }, { "name": "negative regulation of TORC1 signaling", "id": "GO:1904262", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1904262", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDS6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDS6" } ], "pmid": "" }, { "name": "negative regulation of TOR signaling", "id": "GO:0032007", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032007", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDS6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDS6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 144, "end_pos": 146, "annotation": "n_glycosylation_sequon" }, { "start_pos": 465, "end_pos": 467, "annotation": "n_glycosylation_sequon" }, { "start_pos": 49, "end_pos": 51, "annotation": "n_glycosylation_sequon" }, { "start_pos": 4, "end_pos": 6, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QDS6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 569, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QDS6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QDS6" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QDS6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDS6" }, { "id": "PF24064", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24064" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "GATOR1 complex protein NPRL3 C-terminal HTH", "eco_id": "ECO_0000259", "start_pos": 491, "end_pos": 552, "start_aa": "Ser", "end_aa": "Val", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 144, "end_pos": 146 }, { "start_pos": 465, "end_pos": 467 }, { "start_pos": 49, "end_pos": 51 }, { "start_pos": 4, "end_pos": 6 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QDV7-1", "uniprot_ac": "A0A5G2QDV7", "uniprot_id": "A0A5G2QDV7_PIG", "mass": { "chemical_mass": 110042.0, "monoisotopic_mass": 110042.0 }, "refseq": {}, "gene_names": [ { "name": "PCDH15", "type": "recommended", "evidence": [ { "id": "A0A5G2QDV7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDV7" } ] } ], "protein_names": [ { "name": "Protocadherin-15", "type": "recommended", "evidence": [ { "id": "A0A5G2QDV7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDV7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDV7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDV7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PCDH15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDV7", "locus": {} } ], "crossref": [ { "id": "A0A5G2QDV7", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QDV7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000010426", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000010426", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd11304", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd11304", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR002126", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002126", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015919", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015919", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020894", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020894", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR030718", "url": "https://www.ebi.ac.uk/interpro/entry/IPR030718", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041149", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041149", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050971", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050971", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24025", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24025", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24025:SF31", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24025:SF31", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00028", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00028", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18432", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18432", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QDV7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDV7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QDV7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDV7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QQE2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQE2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QQE2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQE2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9E7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9E7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9E7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9E7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFQKFYLWKWLASGIILGSLFTICLGQYDDDCKLARGGPPATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKDNVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQCINKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPDDPTSNDTFEIPLMLTGNIVLRKRLNYEDKTRYFVIIQANDRAQNLNERRTTTTTLTVDVLDGDDLGPMFLPCVLVPNTRDCRPLTYQAAIPELRTPEELNPIIVTPLIQAIDQDQNIQPPSDRPGILYSILVGTPEDYPRFFHMHPRTAELSLLEPVNRDFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATISDSLNLTTPLRIVALDKDIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQIYTFSITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYDVYVYTDMNPGDSVIQLTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVELIVGRTYALTVQAADNAPPAERRHSICTVYIEVLPPNNQSPPRFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSETTGILTLGKALDRESTDRYILIVTASDGRPDGEKAKKVRKPKVEIREPSEEEEVVVTIEKPPAAEPTYTTWKRARIFPMIFKKVKGLADRRAVIHLEDEEWQRRLEEEDKDYLKLTLDQEEATESTVESEEEESSSDYTEYSEEESEFSESETTEEESESETPSEEEESSTPESEESESTESEGEKARKNIVLARRRPVVEEVKEVKGRKEKPPQEPEEPKVKEEEEGPAEVQESELAPVEEPIDLESQHITEEGSAESASVEGGVESEEESESGSSSISSESQSGGPWGFQVPEYDPSKHANQKKSPGANSEGYNTAL", "length": 984, "header": "tr|A0A5G2QDV7-1|A0A5G2QDV7_PIG Isoform 1 of Protocadherin-15 OS=Sus scrofa OX=9823 GN=PCDH15 PE=4 SV=1 CANONICAL=A0A5G2QDV7-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QDV7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDV7/entry", "sequence": { "sequence": "MFQKFYLWKWLASGIILGSLFTICLGQYDDDCKLARGGPPATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKDNVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQCINKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPDDPTSNDTFEIPLMLTGNIVLRKRLNYEDKTRYFVIIQANDRAQNLNERRTTTTTLTVDVLDGDDLGPMFLPCVLVPNTRDCRPLTYQAAIPELRTPEELNPIIVTPLIQAIDQDQNIQPPSDRPGILYSILVGTPEDYPRFFHMHPRTAELSLLEPVNRDFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATISDSLNLTTPLRIVALDKDIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQIYTFSITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYDVYVYTDMNPGDSVIQLTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVELIVGRTYALTVQAADNAPPAERRHSICTVYIEVLPPNNQSPPRFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSETTGILTLGKALDRESTDRYILIVTASDGRPDGEKAKKVRKPKVEIREPSEEEEVVVTIEKPPAAEPTYTTWKRARIFPMIFKKVKGLADRRAVIHLEDEEWQRRLEEEDKDYLKLTLDQEEATESTVESEEEESSSDYTEYSEEESEFSESETTEEESESETPSEEEESSTPESEESESTESEGEKARKNIVLARRRPVVEEVKEVKGRKEKPPQEPEEPKVKEEEEGPAEVQESELAPVEEPIDLESQHITEEGSAESASVEGGVESEEESESGSSSISSESQSGGPWGFQVPEYDPSKHANQKKSPGANSEGYNTAL", "length": 984, "header": "tr|A0A5G2QDV7-1|A0A5G2QDV7_PIG Isoform 1 of Protocadherin-15 OS=Sus scrofa OX=9823 GN=PCDH15 PE=4 SV=1 CANONICAL=A0A5G2QDV7-1" }, "locus": { "chromosome": "14", "start_pos": 96386696, "end_pos": 95658738, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075842.1", "url": "https://www.ensembl.org/id/ENSSSCT00000075842.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060240.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060240.1" } ] } }, { "isoform_ac": "A0A5G2QQE2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQE2/entry", "sequence": { "sequence": "MFQKFYLWKWLASGIILGSLFTICLGQYDDDCKLARGGPPATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKDNVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQCINKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPDDPTSNDTFEIPLMLTGNIVLRKRLNYEDKTRYFVIIQANDRAQNLNERRTTTTTLTVDVLDGDDLGPMFLPCVLVPNTRDCRPLTYQAAIPELRTPEELNPIIVTPLIQAIDQDQNIQPPSDRPGILYSILVGTPEDYPRFFHMHPRTAELSLLEPVNRDFHQKFDLVIKEKAKKVRKPKVEIREPSEEEEVVVTIEKPPAAEPTYTTWKRARIFPMIFKKVKGLADRRAVIHLEDEEWQRRLEEEDKDYLKLTLDQEEATESTVESEEEESSSDYTEYSEEESEFSESETTEEESESETPSEEEESSTPESEESESTESEGEKARKNIVLARRRPVVEEVKEVKGRKEKPPQEPEEPKVKEEEEGPAEVQESELAPVEEPIDLESQHITEEGSAESASVEGGVESEEESESGSSSISSESQSGGPWGFQVPEYDPSKHANQKKSPGANSEGYNTAL", "length": 653, "header": "tr|A0A5G2QQE2-1|A0A5G2QDV7_PIG Computationally mapped isoform of Protocadherin-15 OS=Sus scrofa OX=9823 GN=PCDH15 PE=4 SV=1 CANONICAL=A0A5G2QDV7-1" }, "locus": { "chromosome": "14", "start_pos": 96386696, "end_pos": 95658738, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088268.1", "url": "https://www.ensembl.org/id/ENSSSCT00000088268.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067117.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067117.1" } ] } }, { "isoform_ac": "A0A5G2R9E7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9E7/entry", "sequence": { "sequence": 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In the mature brain, plays a role in the dynamics of neuronal structure and function, including synaptic plasticity.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QE80", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE80#function" }, { "database": "UniProtKB", "id": "ARBA00060042", "url": "https://www.uniprot.org/uniprotkb/ARBA00060042#function" }, { "database": "UniProtKB", "id": "A0A8W4FI28", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FI28#function" }, { "database": "UniProtKB", "id": "A0A5G2QF75", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QF75#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QE80", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE80" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "L1CAM", "url": 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"CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR003598", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003598", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003599", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003599", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003961", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003961", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013098", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013098", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR026966", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026966", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036116", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036116", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051170", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051170", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR12231", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12231", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12231:SF241", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12231:SF241", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00041", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00041", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07679", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07679", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13882", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13882", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13927", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13927", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QE80", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE80", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QE80-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE80-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QF75", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QF75", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QF75-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QF75-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FI28", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FI28", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FI28-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FI28-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7GN08", "url": "https://www.uniprot.org/uniprotkb/K7GN08", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7GN08-1", "url": "https://www.uniprot.org/uniprotkb/K7GN08-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAVALRYLWPLLLCSPCLLIQIPEEYEGHHVMEPPVITEESPRRVVVFPTDDISLKCEASGKPAVQFRWTRDGVHFKPKEEPGVTVSQAPHSGSFTMEGNNSNFAQSFQGTYRCFASNKLGTAMSHEIQLMAEGTPKWPKETVKPVEVEEGESVVLPCHPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMMDRRPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLRLSGPMPADRVTYQNHNKTLQLLNVVEEDDGEYHCLAENPLGSDRHVYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIHHGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVELPAKILTPDNETYMAVQGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNMTIVANLQVKDATQILQGPRSAIEKKGSRVAFTCQAYFDSSLQHSITWRGDGQDLRELGDSDKYFIEEGRLVIHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGPVPQLEVSDQHLLRQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSATLKLSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVVTWKPLRWMDWNAPQVQYRVQWRPQGTQGAWQEQIVSDPLLVVSNTSTFVPYEIKVQAVNSQGKGPEPQITIGYSGEDYPQASPELEEIQILNSSTVLVRWRHLDPQVKGHLRGYNVTYWWEGSQRKHSKRHVHKGHVVVPANATSAILGGLRPYSTYHLEVQAFNGRGPGPASSRSFSTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYVLSYHPLDDEGKEQLSFDLPDPELRTHNLTNLSPHLRYRFQLQATTKEGPGEAIVREGSTMAFSGTPDFGNISAMAGENYSVVSWVPKEGQCNFRFQIWFKALGDGKLGPPLLPQYISYNQSSYTQWDLQPDTNYEIHLFKESVLMHRMAVKTNGTGRVGLPPAGFEPEGWFIGFVSAIILLLLVLLILCFIKRSKGGKYSVKDKEDTQVDSEARPMKDETFGEYRSLESDNEEKAFGSSQPSLNGDLKPLGSDDSLADYGGSVDVQFNEDGSFIGQYSGKKEKEAAGGNDSSGAASPINPAGTLE", "length": 1256, "header": "tr|A0A5G2QE80-1|A0A5G2QE80_PIG Isoform 1 of Neural cell adhesion molecule L1 OS=Sus scrofa OX=9823 GN=L1CAM PE=1 SV=2 CANONICAL=A0A5G2QE80-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QE80-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE80/entry", "sequence": { "sequence": "MAVALRYLWPLLLCSPCLLIQIPEEYEGHHVMEPPVITEESPRRVVVFPTDDISLKCEASGKPAVQFRWTRDGVHFKPKEEPGVTVSQAPHSGSFTMEGNNSNFAQSFQGTYRCFASNKLGTAMSHEIQLMAEGTPKWPKETVKPVEVEEGESVVLPCHPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMMDRRPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLRLSGPMPADRVTYQNHNKTLQLLNVVEEDDGEYHCLAENPLGSDRHVYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIHHGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVELPAKILTPDNETYMAVQGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNMTIVANLQVKDATQILQGPRSAIEKKGSRVAFTCQAYFDSSLQHSITWRGDGQDLRELGDSDKYFIEEGRLVIHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGPVPQLEVSDQHLLRQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSATLKLSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVVTWKPLRWMDWNAPQVQYRVQWRPQGTQGAWQEQIVSDPLLVVSNTSTFVPYEIKVQAVNSQGKGPEPQITIGYSGEDYPQASPELEEIQILNSSTVLVRWRHLDPQVKGHLRGYNVTYWWEGSQRKHSKRHVHKGHVVVPANATSAILGGLRPYSTYHLEVQAFNGRGPGPASSRSFSTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYVLSYHPLDDEGKEQLSFDLPDPELRTHNLTNLSPHLRYRFQLQATTKEGPGEAIVREGSTMAFSGTPDFGNISAMAGENYSVVSWVPKEGQCNFRFQIWFKALGDGKLGPPLLPQYISYNQSSYTQWDLQPDTNYEIHLFKESVLMHRMAVKTNGTGRVGLPPAGFEPEGWFIGFVSAIILLLLVLLILCFIKRSKGGKYSVKDKEDTQVDSEARPMKDETFGEYRSLESDNEEKAFGSSQPSLNGDLKPLGSDDSLADYGGSVDVQFNEDGSFIGQYSGKKEKEAAGGNDSSGAASPINPAGTLE", "length": 1256, "header": "tr|A0A5G2QE80-1|A0A5G2QE80_PIG Isoform 1 of Neural cell adhesion molecule L1 OS=Sus scrofa OX=9823 GN=L1CAM PE=1 SV=2 CANONICAL=A0A5G2QE80-1" }, "locus": { "chromosome": "X", "start_pos": 124609457, "end_pos": 124596656, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082165.3", "url": "https://www.ensembl.org/id/ENSSSCT00000082165.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062478.2", "url": "https://www.ensembl.org/id/ENSSSCP00000062478.2" } ] } }, { "isoform_ac": "A0A5G2QF75-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QF75/entry", "sequence": { "sequence": "MAVALRYLWPLLLCSPCLLIQIPEEYEGHHVMEPPVITEESPRRVVVFPTDDISLKCEASGKPAVQFRWTRDGVHFKPKEEPGVTVSQAPHSGSFTMEGNNSNFAQSFQGTYRCFASNKLGTAMSHEIQLMAEGTPKWPKETVKPVEVEEGESVVLPCHPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMMDRRPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLRLSGPMPADRVTYQNHNKTLQLLNVVEEDDGEYHCLAENPLGSDRHVYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIHHGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVELPAKILTPDNETYMAVQGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNMTIVANLQVKDATQILQGPRSAIEKKGSRVAFTCQAYFDSSLQHSITWRGDGQDLRELGDSDKYFIEEGRLVIHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGPVPQLEVSDQHLLRQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSATLKLSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVVTWKPLRWMDWNAPQVQYRVQWRPQGTQGAWQEQIVSDPLLVVSNTSTFVPYEIKVQAVNSQGKGPEPQITIGYSGEDYPQASPELEEIQILNSSTVLVRWRHLDPQVKGHLRGYNVTYWWEGSQRKHSKRHVHKGHVVVPANATSAILGGLRPYSTYHLEVQAFNGRGPGPASSRSFSTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYVLSYHPLDDEGKEQLSFDLPDPELRTHNLTNLSPHLRYRFQLQATTKEGPGEAIVREGSTMAFSGTPDFGNISAMAGENYSVVSWVPKEGQCNFRFQIWFKALGDGKLGPPLLPQYISYNQSSYTQWDLQPDTNYEIHLFKESVLMHRMAVKTNGTGRVGLPPAGFEPEGWFIGFVSAIILLLLVLLILCFIKRSKGGKYSVKDKEDTQVDSEARPMKDETFGEYSDNEEKAFGSSQPSLNGDLKPLGSDDSLADYGGSVDVQFNEDGSFIGQYSGKKEKEAAGGNDSSGAASPINPAGTLE", "length": 1252, "header": "tr|A0A5G2QF75-1|A0A5G2QF75_PIG Computationally mapped isoform of Neural cell adhesion molecule L1 OS=Sus scrofa OX=9823 GN=L1CAM PE=1 SV=2 CANONICAL=A0A5G2QE80-1" }, "locus": { "chromosome": "X", "start_pos": 124609457, "end_pos": 124596656, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068258.2", "url": "https://www.ensembl.org/id/ENSSSCT00000068258.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062850.2", "url": "https://www.ensembl.org/id/ENSSSCP00000062850.2" } ] } }, { "isoform_ac": "A0A8W4FI28-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FI28/entry", "sequence": { "sequence": "VPLSRCFLWSLLSGPLQSVCLLHSFHGPGLMEPPVITEESPRRVVVFPTDDISLKCEASGKPAVQFRWTRDGVHFKPKEEPGVTVSQAPHSGSFTMEGNNSNFAQSFQGTYRCFASNKLGTAMSHEIQLMAEGTPKWPKETVKPVEVEEGESVVLPCHPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMMDRRPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLRLSGPMPADRVTYQNHNKTLQLLNVVEEDDGEYHCLAENPLGSDRHVYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIHHGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVELPAKILTPDNETYMAVQGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNMTIVANLQVKDATQILQGPRSAIEKKGSRVAFTCQAYFDSSLQHSITWRGDGQDLRELGDSDKYFIEEGRLVIHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGPVPQLEVSDQHLLRQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSATLKLSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVVTWKPLRWMDWNAPQVQYRVQWRPQGTQGAWQEQIVSDPLLVVSNTSTFVPYEIKVQAVNSQGKGPEPQITIGYSGEDYPQASPELEEIQILNSSTVLVRWRHLDPARSRATSVTYWWEGSQRKHSKRHVHKGHVVVPANATSAILGGLRPYSTYHLEVQAFNGRGPGPASSRSFSTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYVLSYHPLDDEGKEQLSFDLPDPELRTHNLTNLSPHLRYRFQLQATTKEGPGEAIVREGSTMAFSGTPDFGNISAMAGENYSVVSWVPKEGQCNFRFQIWFKALGDGKLGPPLLPQYISYNQSSYTQWDLQPDTNYEIHLFKESVLMHRMAVKTNGTGRVGLPPAGFEPEGWFIGFVSAIILLLLVLLILCFIKRSKGGKYSVKDKEDTQVDSEARPMKDETFGEYSDNEEKAFGSSQPSLNGDLKPLGSDDSLADYGGSVDVQFNEDGSFIGQYSGKKEKEAAGGNDSSGAASPINPAGTLE", "length": 1248, "header": "tr|A0A8W4FI28-1|A0A5G2QE80_PIG Computationally mapped isoform of Neural cell adhesion molecule L1 OS=Sus scrofa OX=9823 GN=L1CAM PE=1 SV=1 CANONICAL=A0A5G2QE80-1" }, "locus": { "chromosome": "X", "start_pos": 124606427, "end_pos": 124596656, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000094818.1", "url": "https://www.ensembl.org/id/ENSSSCT00000094818.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079101.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079101.1" } ] } }, { "isoform_ac": "K7GN08-1", "url": "https://www.uniprot.org/uniprotkb/K7GN08/entry", "sequence": { "sequence": "VPLSRCFLWSLLSGPLQSVCLLHSFHGPGLMEPPVITEESPRRVVVFPTDDISLKCEASGKPAVQFRWTRDGVHFKPKEEPGVTVSQAPHSGSFTMEGNNSNFAQSFQGTYRCFASNKLGTAMSHEIQLMAEGTPKWPKETVKPVEVEEGESVVLPCHPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMMDRRPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLRLSGPMPADRVTYQNHNKTLQLLNVVEEDDGEYHCLAENPLGSDRHVYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIHHGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVELPAKILTPDNETYMAVQGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNMTIVANLQVKDATQILQGPRSAIEKKGSRVAFTCQAYFDSSLQHSITWRGDGQDLRELGDSDKYFIEEGRLVIHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGPVPQLEVSDQHLLRQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSATLKLSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVVTWKPLRWMDWNAPQVQYRVQWRPQGTQGAWQEQIVSDPLLVVSNTSTFVPYEIKVQAVNSQGKGPEPQITIGYSGEDYPQASPELEEIQILNSSTVLVTYWWEGSQRKHSKRHVHKGHVVVPANATSAILGGLRPYSTYHLEVQAFNGRGPGPASSRSFSTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYVLSYHPLDDEGKEQLSFDLPDPELRTHNLTNLSPHLRYRFQLQATTKEGPGEAIVREGSTMAFSGTPDFGNISAMAGENYSVVSWVPKEGQCNFRFQIWFKALGDGKLGPPLLPQYISYNQSSYTQWDLQPDTNYEIHLFKESVLMHRMAVKTNGTGRVGLPPAGFEPEGWFIGFVSAIILLLLVLLILCFIKRSKGGKYSVKDKEDTQVDSEARPMKDETFGEYSDNEEKAFGSSQPSLNGDLKPLGSDDSLADYGGSVDVQFNEDGSFIGQYSGKKEKEAAGGNDSSGAASPINPAGTLE", "length": 1233, "header": "tr|K7GN08-1|A0A5G2QE80_PIG Computationally mapped isoform of Neural cell adhesion molecule L1 OS=Sus scrofa OX=9823 GN=L1CAM PE=1 SV=4 CANONICAL=A0A5G2QE80-1" }, "locus": { "chromosome": "X", "start_pos": 124606427, "end_pos": 124596656, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000034202.4", "url": "https://www.ensembl.org/id/ENSSSCT00000034202.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000029257.4", "url": "https://www.ensembl.org/id/ENSSSCP00000029257.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QEI4-1", "uniprot_ac": "A0A5G2QEI4", "uniprot_id": "A0A5G2QEI4_PIG", "mass": { "chemical_mass": 92293.0, "monoisotopic_mass": 92293.0 }, "refseq": { "ac": "XP_020931806", "name": "disintegrin and metalloproteinase domain-containing protein 23 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931806" }, "gene_names": [ { "name": "ADAM23", "type": "recommended", "evidence": [ { "id": "A0A5G2QEI4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEI4" } ] }, { "name": "ADAM23", "type": "synonym", "evidence": [ { "id": "XP_020931806", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931806" } ] } ], "protein_names": [ { "name": "ADAM metallopeptidase domain 23", "type": "synonym", "evidence": [ { "id": "A0A5G2QEI4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEI4/entry#names_and_taxonomy" } ] }, { "name": "disintegrin and metalloproteinase domain-containing protein 23 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020931806", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931806" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEI4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEI4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ADAM23", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEI4", "locus": { "chromosome": "15", "start_pos": 109886148, "end_pos": 109695282, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016131", "url": "https://www.ensembl.org/id/ENSSSCG00000016131" } ] } } ], "crossref": [ { "id": "A0A5G2QEI4", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QEI4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000016131", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016131", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd04269", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04269", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100518044", "url": "https://www.ncbi.nlm.nih.gov/gene/100518044", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000742", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000742", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001590", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001590", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001762", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001762", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002870", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002870", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006586", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006586", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013111", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013111", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR024079", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024079", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR034027", "url": "https://www.ebi.ac.uk/interpro/entry/IPR034027", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036436", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036436", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100518044", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518044", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ECDCTES", "url": "https://omabrowser.org/oma/group/ECDCTES/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QEI4", "url": "https://www.orthodb.org/?gene=A0A5G2QEI4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11905", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11905", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11905:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11905:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00200", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00200", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01421", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01421", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01562", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01562", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07974", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07974", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08516", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08516", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-5682910", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5682910", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020931806", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931806", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QEI4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEI4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QEI4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEI4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SHD2", "url": "https://www.uniprot.org/uniprotkb/F1SHD2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SHD2-1", "url": "https://www.uniprot.org/uniprotkb/F1SHD2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKPPGNSSPRPPQAGCSLSRASSGPRGGPAGPAPIRALARAPPCRLLLVLLLLPPLAASSRPRAWGAAAPSAPHWNETAEKILRVLADEDNTLQQNNSSNISYSNAMQKEITLPSRLIYYINQDSESPYHVLDTKARHQQKHNKAVHLAQASFQIEAFGSKFILDLTLNNGLLSSDYVEIHYENGKPQYSKGGEHCYYHGHIRGVKDSRVALSTCNGLHGMFEDNTFVYMIEPLELTHDEKSTGRPHVIQKTLAGQYSKQMKNHSMESSDHWPILPELQWLRRRRKRAVNPSRGVFEEMKYLELMIVNDHKTYKKCRSSHAHTNNFAKSVVNLVDSIYKEQLNTRVVLVAVETWSEKDHIDITTNPVQMLHEFSKYRQRIKQHADAVHLISRVTFHYKRSSLSYFGGVCSHTRGVGVNEYGLPMAVAQVLSQSLAQNLGIQWEPSSRKPKCDCTESWGGCIMEETGVSHSRKFSKCSILEYRDFLQRGGGACLFNRPTKLFEPTECGNGYVEAGEECDCGIHVECYGLCCKKCSLSNGAHCSDGPCCNSTSCLFQPRGYECRDAVNGCDITEYCTGDSGQCPPNLHKQDGYACNQNQGRCYNGECKTRDNQCQYIWGTKASGSDKFCYEKLNTEGTEKGNCGKDGDRWIQCSKHDVFCGFLLCTNLTRAPRIGQLQGEIIPTSFYHQGRVIDCSGAHVVLDDDTDVGYVEDGTPCGPSMMCLDRKCLQIQALNMSSCPLDSKGKVCSGHGVCSNEATCICDFTWAGTDCSIRDPVRNLHPPKDEGPKVNMATSRLIGAVAGTILALGVIFGGTGWGIENVKKRRFDPTQQGPI", "length": 833, "header": "tr|A0A5G2QEI4-1|A0A5G2QEI4_PIG Isoform 1 of ADAM metallopeptidase domain 23 OS=Sus scrofa OX=9823 GN=ADAM23 PE=4 SV=1 CANONICAL=A0A5G2QEI4-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QEI4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEI4/entry", "sequence": { "sequence": "MKPPGNSSPRPPQAGCSLSRASSGPRGGPAGPAPIRALARAPPCRLLLVLLLLPPLAASSRPRAWGAAAPSAPHWNETAEKILRVLADEDNTLQQNNSSNISYSNAMQKEITLPSRLIYYINQDSESPYHVLDTKARHQQKHNKAVHLAQASFQIEAFGSKFILDLTLNNGLLSSDYVEIHYENGKPQYSKGGEHCYYHGHIRGVKDSRVALSTCNGLHGMFEDNTFVYMIEPLELTHDEKSTGRPHVIQKTLAGQYSKQMKNHSMESSDHWPILPELQWLRRRRKRAVNPSRGVFEEMKYLELMIVNDHKTYKKCRSSHAHTNNFAKSVVNLVDSIYKEQLNTRVVLVAVETWSEKDHIDITTNPVQMLHEFSKYRQRIKQHADAVHLISRVTFHYKRSSLSYFGGVCSHTRGVGVNEYGLPMAVAQVLSQSLAQNLGIQWEPSSRKPKCDCTESWGGCIMEETGVSHSRKFSKCSILEYRDFLQRGGGACLFNRPTKLFEPTECGNGYVEAGEECDCGIHVECYGLCCKKCSLSNGAHCSDGPCCNSTSCLFQPRGYECRDAVNGCDITEYCTGDSGQCPPNLHKQDGYACNQNQGRCYNGECKTRDNQCQYIWGTKASGSDKFCYEKLNTEGTEKGNCGKDGDRWIQCSKHDVFCGFLLCTNLTRAPRIGQLQGEIIPTSFYHQGRVIDCSGAHVVLDDDTDVGYVEDGTPCGPSMMCLDRKCLQIQALNMSSCPLDSKGKVCSGHGVCSNEATCICDFTWAGTDCSIRDPVRNLHPPKDEGPKVNMATSRLIGAVAGTILALGVIFGGTGWGIENVKKRRFDPTQQGPI", "length": 833, "header": "tr|A0A5G2QEI4-1|A0A5G2QEI4_PIG Isoform 1 of ADAM metallopeptidase domain 23 OS=Sus scrofa OX=9823 GN=ADAM23 PE=4 SV=1 CANONICAL=A0A5G2QEI4-1" }, "locus": { "chromosome": "15", "start_pos": 109882491, "end_pos": 109695556, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076220.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076220.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062593.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062593.1" } ] } }, { "isoform_ac": "F1SHD2-1", "url": "https://www.uniprot.org/uniprotkb/F1SHD2/entry", "sequence": { "sequence": "MKPPGNSSPRPPQAGCSLSRASSGPRGGPAGPAPIRALARAPPCRLLLVLLLLPPLAASSRPRAWGAAAPSAPHWNETAEKILRVLADEDNTLQQNNSSNISYSNAMQKEITLPSRLIYYINQDSESPYHVLDTKARHQQKHNKAVHLAQASFQIEAFGSKFILDLTLNNGLLSSDYVEIHYENGKPQYSKGGEHCYYHGHIRGVKDSRVALSTCNGLHGMFEDNTFVYMIEPLELTHDEKSTGRPHVIQKTLAGQYSKQMKNHSMESSDHWPILPELQWLRRRRKRAVNPSRGVFEEMKYLELMIVNDHKTYKKCRSSHAHTNNFAKSVVNLVDSIYKEQLNTRVVLVAVETWSEKDHIDITTNPVQMLHEFSKYRQRIKQHADAVHLISRVTFHYKRSSLSYFGGVCSHTRGVGVNEYGLPMAVAQVLSQSLAQNLGIQWEPSSRKPKCDCTESWGGCIMEETGVSHSRKFSKCSILEYRDFLQRGGGACLFNRPTKLFEPTECGNGYVEAGEECDCGIHVECYGLCCKKCSLSNGAHCSDGPCCNSTSCLFQPRGYECRDAVNGCDITEYCTGDSGQCPPNLHKQDGYACNQNQGRCYNGECKTRDNQCQYIWGTKASGSDKFCYEKLNTEGTEKGNCGKDGDRWIQCSKHDVFCGFLLCTNLTRAPRIGQLQGEIIPTSFYHQGRVIDCSGAHVVLDDDTDVGYVEDGTPCGPSMMCLDRKCLQIQALNMSSCPLDSKGKVCSGHGVCSNEATCICDFTWAGTDCSIRDPVRNLHPPKDEGPKGPSATNLIIGSIAGAILVAAIVLGGTGWGFKNVKKRRFDPTQQGPI", "length": 833, "header": "tr|F1SHD2-1|F1SHD2_PIG Computationally mapped isoform of ADAM metallopeptidase domain 23 OS=Sus scrofa OX=9823 GN=ADAM23 PE=4 SV=3 CANONICAL=A0A5G2QEI4-1" }, "locus": { "chromosome": "15", "start_pos": 109882491, "end_pos": 109695556, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017564.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017564.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017091.3", "url": "https://www.ensembl.org/id/ENSSSCP00000017091.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEI4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEI4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100518044", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518044", "resource": "KEGG Pathway" }, { "id": "R-SSC-5682910", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5682910", "resource": "Reactome", "description": "LGI-ADAM interactions" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q2U8D8-1", "protein_name": "ADAM metallopeptidase domain 23", "gene_name": "ADAM23", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKPPGSISLRRPRRPALLPLLVAPLLLLHGYARSRAAAADDLHWNETAGRTEGVLADEENAFQLNRSSGGENNSHSSAIQKEITLPSRLIYYINKDSETPYHVLDTRARHQQKHNKAVHLAQASFQIEAFGSKFILDLTLNNDLLSSNYVEIHYEDGKQKFSKGGEHCYYHGNIRGIKDSKVALSTCNGLHGMFEDSAYVYLIEPMDLTHSAESKSRPHIIQRTYGTRASMQLQDHETESSSEWPFISELLWLKRKRRRRAASRGVFEEMKYLELMIVNDHKMFKKHRSSNAYTNNFAKSVVNLVDAIYKEQLNTRVVLVAVETWTDRDRINIHPDPLQMLHDFSKYRQHYIKQHADAVHLLSNVTFHYKRSSLSYFGGVCSVTRGVGVNEYGLPLAMAQELAQSLAQNLGIQWEPAARKPKCDCTESWGGCIMEETGVYHSRKFSKCSIAEYKEFLLRGGGACLFNRPTKLFETTECGNGYVEAGEECDCGFRMECYADCCKKCSLSNGAHCSDGPCCNTSCLFFPRGYDCRYAVNECDIAEFCTGDSGQCPPNLHKQDGYACDSNQGRCYNGECKTRDNQCKYIWGSKSSGSDKFCYEKLNTEGTKKGNCGKDGDRWIQCSKHDVFCGFLLCTNLTKVPRVGQVQGEIIPNSFYHQGRIVDCSGAHVLLDDDTDLGYVEDGAPCGPQMMCLDKKCLPIQSLNISSCPIGSNGKVCSGHGVCSNEATCICNFSWAGTDCSIDDPIRDTGNKKDEGPKGPSATNLIIGSIAGAILVAAIVLGGTGWGFKLSDFHMNIRYCGVKSKSNKCQKTKVRSKSTRPYLKKRNSRSCFFHYWILGMLSLL", "length": 844 }, "evidence": [ { "id": "A0A5G2QEI4", "url": "https://omabrowser.org/oma/group/A0A5G2QEI4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D3ZT36-1", "protein_name": "ADAM metallopeptidase domain 23", "gene_name": "Adam23", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKPPGSSSRRPPLTGCSLPGASRGPGRCPAGPVPARAPPCRLLLVLLLLPALAASSRPRARGAAALSALHWNETAENSPGVVADEDSTLQQNGSRNTSYSSAVQKEITLPSRLVYYINQDSESPYHVLDTKARHQQKHNKAVHLAQASFQIEAFGSKFILDLILNNGLLSSDYVEIHYEDGKQMYSKGGEHCYYHGSIRGVKDSRVALSTCNGLHGMFEDDTFVYMIEPLELTHDEKSTGRPHIIQKTLAGQYSKQMKNLSTDGSDQWPLLPELQWLRRRKRAVNPSRGVFEEMKYLELMIVNDHKTYKKHRSSHAHTNNFAKSVVNLVDSIYKEQLNTRVVLVAVETWTEKDQIDITINPVQMLHEFSKYRQRIKQHADAVHLISRVTFHYKRSSLSYFGGVCSRVKGVGVNEYGLPMAVAQVLSQSLAQNLGIQWEPSSRKPKCECIESWGGCIMEETGVSHSRKFSKCSILEYRDFLQRGGGACLFNRPTKLFEPTECGNGYVEAGEECDCGFHVECYGVCCKKCSLSNGAHCSDGPCCNNTSCLFQSRGYECRDAVNSCDITEYCTGDSGQCPPNLHKQDGYACNQNQGRCYNGECKTRDNQCQYIWGTKASGSDKFCYEKLNTEGTEKGNCGKDGDRWIQCSKHDVFCGFLLCTNLTRAPRIGQLQGEIIPTSFYHQGRVIDCSGAHVVLDDDTDVGYVEDGTPCGPSMMCLDRKCLQIQALNMSSCPLDSKGKVCSGHGVCSNEATCICDFTWAGTDCSIRDPVRNPNPPKDEGPKVNMATSRLIGAVAGTVLALGVIFGGTGWGIENVKKRRFDPTQQGPI", "length": 828 }, "evidence": [ { "id": "A0A5G2QEI4", "url": "https://omabrowser.org/oma/group/A0A5G2QEI4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "O75077-1", "protein_name": "Disintegrin and metalloproteinase domain-containing protein 23", "gene_name": "ADAM23", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKPPGSSSRQPPLAGCSLAGASCGPQRGPAGSVPASAPARTPPCRLLLVLLLLPPLAASSRPRAWGAAAPSAPHWNETAEKNLGVLADEDNTLQQNSSSNISYSNAMQKEITLPSRLIYYINQDSESPYHVLDTKARHQQKHNKAVHLAQASFQIEAFGSKFILDLILNNGLLSSDYVEIHYENGKPQYSKGGEHCYYHGSIRGVKDSKVALSTCNGLHGMFEDDTFVYMIEPLELVHDEKSTGRPHIIQKTLAGQYSKQMKNLTMERGDQWPFLSELQWLKRRKRAVNPSRGIFEEMKYLELMIVNDHKTYKKHRSSHAHTNNFAKSVVNLVDSIYKEQLNTRVVLVAVETWTEKDQIDITTNPVQMLHEFSKYRQRIKQHADAVHLISRVTFHYKRSSLSYFGGVCSRTRGVGVNEYGLPMAVAQVLSQSLAQNLGIQWEPSSRKPKCDCTESWGGCIMEETGVSHSRKFSKCSILEYRDFLQRGGGACLFNRPTKLFEPTECGNGYVEAGEECDCGFHVECYGLCCKKCSLSNGAHCSDGPCCNNTSCLFQPRGYECRDAVNECDITEYCTGDSGQCPPNLHKQDGYACNQNQGRCYNGECKTRDNQCQYIWGTKAAGSDKFCYEKLNTEGTEKGNCGKDGDRWIQCSKHDVFCGFLLCTNLTRAPRIGQLQGEIIPTSFYHQGRVIDCSGAHVVLDDDTDVGYVEDGTPCGPSMMCLDRKCLQIQALNMSSCPLDSKGKVCSGHGVCSNEATCICDFTWAGTDCSIRDPVRNLHPPKDEGPKGPSATNLIIGSIAGAILVAAIVLGGTGWGFKNVKKRRFDPTQQGPI", "length": 832 }, "evidence": [ { "id": "A0A5G2QEI4", "url": "https://omabrowser.org/oma/group/A0A5G2QEI4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9R1V7-1", "protein_name": "Disintegrin and metalloproteinase domain-containing protein 23", "gene_name": "Adam23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKPPGSISRRPTLTGCSLPGASCGPGRCPAGPVPARAPPCRLLLVLLLLPALATSSRPRARGAAAPSAPHWNETAEKTLGVLADEDNTLQQNSSSRNTSYSSAVQKEITLPSRLVYYINQDSESPYHVLDTKARHQQKHNKAVHLAQASFQIEAFGSKFILDLTLNNGLLSSDYVEIHYEDGKQMYSKGGEHCYYHGSIRGVKDSRVALSTCNGLHGMFEDDTFVYMIEPLELTDDEKSTGRPHIIQKTLAGQYSKQMKNLSTDGSDQWPLLPELQWLRRRKRAVNPSRGVFEEMKYLELMIVNDHKTYKKHRSSHAHTNNFAKSVVNLVDSIYKEQLNTRVVLVAVETWTEKDHIDITINPVQMLHDFSKYRQRIKQHADAVHLISRVTFHYKRSSLSYFGGVCSRIRGVGVNEYGLPMAVAQVLSQSLAQNLGIQWEPSSRKPKCECIESWGGCIMEETGVSHSRKFSKCSILEYRDFLQRGGGACLFNRPTKLFEPTECGNGYVEAGEECDCGFHVECYGVCCKKCSLSNGAHCSDGPCCNNTSCLFQSRGYECRDAVNSCDITEYCTGDSGQCPPNLHKQDGYSCNQNQGRCYNGECKTRDNQCQYIWGTKAAGSDKFCYEKLNTEGTEKGNCGKDGDRWIPCSKHDVFCGFLLCTNLTRAPRIGQLQGEIIPTSFYHQGRVIDCSGAHVVLDDDTDVGYVEDGTPCGPSMMCLDRKCLQIQALNMSSCPLDSRGKVCSGHGVCSNEATCICDFTWAGTDCSIRDPVRNPNPPKDEGPKGPSATNLIIGSIAGAILVAAIVLGGTGWGFKNVKKRRFDPTQQGPI", "length": 829 }, "evidence": [ { "id": "A0A5G2QEI4", "url": "https://omabrowser.org/oma/group/A0A5G2QEI4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "metalloendopeptidase activity", "id": "GO:0004222", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004222", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEI4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEI4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEI4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEI4" } ], "pmid": "" }, { "name": "integrin-mediated signaling pathway", "id": "GO:0007229", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007229", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEI4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEI4" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "presynaptic membrane", "id": "GO:0042734", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042734", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEI4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEI4" } ], "pmid": "" }, { "name": "glutamatergic synapse", "id": "GO:0098978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098978", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEI4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEI4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 100, "end_pos": 102, "annotation": "n_glycosylation_sequon" }, { "start_pos": 263, "end_pos": 265, "annotation": "n_glycosylation_sequon" }, { "start_pos": 548, "end_pos": 550, "annotation": "n_glycosylation_sequon" }, { "start_pos": 665, "end_pos": 667, "annotation": "n_glycosylation_sequon" }, { "start_pos": 6, "end_pos": 8, "annotation": "n_glycosylation_sequon" }, { "start_pos": 733, "end_pos": 735, "annotation": "n_glycosylation_sequon" }, { "start_pos": 76, "end_pos": 78, "annotation": "n_glycosylation_sequon" }, { "start_pos": 96, "end_pos": 98, "annotation": "n_glycosylation_sequon" }, { "start_pos": 97, "end_pos": 99, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QEI4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 833, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QEI4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QEI4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QEI4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEI4" }, { "id": "PS50214", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50214" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Disintegrin", "eco_id": "ECO_0000259", "start_pos": 503, "end_pos": 589, "start_aa": "Pro", "end_aa": "Asp", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A5G2QEI4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEI4" }, { "id": "PS50026", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50026" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "EGF-like", "eco_id": "ECO_0000259", "start_pos": 733, "end_pos": 770, "start_aa": "Asn", "end_aa": "Ser", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A5G2QEI4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEI4" }, { "id": "PS50215", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50215" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Peptidase M12B", "eco_id": "ECO_0000259", "start_pos": 300, "end_pos": 497, "start_aa": "Lys", "end_aa": "Pro", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 100, "end_pos": 102 }, { "start_pos": 263, "end_pos": 265 }, { "start_pos": 548, "end_pos": 550 }, { "start_pos": 665, "end_pos": 667 }, { "start_pos": 6, "end_pos": 8 }, { "start_pos": 733, "end_pos": 735 }, { "start_pos": 76, "end_pos": 78 }, { "start_pos": 96, "end_pos": 98 }, { "start_pos": 97, "end_pos": 99 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QEJ3-1", "uniprot_ac": "A0A5G2QEJ3", "uniprot_id": "A0A5G2QEJ3_PIG", "mass": { "chemical_mass": 95996.0, "monoisotopic_mass": 95996.0 }, "refseq": {}, "gene_names": [ { "name": "CSF2RB", "type": "recommended", "evidence": [ { "id": "A0A5G2QEJ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEJ3" } ] } ], "protein_names": [ { "name": "Colony stimulating factor 2 receptor subunit beta", "type": "synonym", "evidence": [ { "id": "A0A5G2QEJ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEJ3/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEJ3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEJ3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CSF2RB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEJ3", "locus": { "chromosome": "5", "start_pos": 10816376, "end_pos": 10840618, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000136", "url": "https://www.ensembl.org/id/ENSSSCG00000000136" } ] } } ], "crossref": [ { "id": "A0A5G2QEJ3", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QEJ3", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000000136", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000136", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00063", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00063", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR003531", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003531", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003961", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003961", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015321", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015321", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036116", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036116", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048668", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048668", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR23037", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23037", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23037:SF22", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23037:SF22", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF09240", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09240", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21460", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21460", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-512988", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-512988", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-5673001", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5673001", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-912526", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-912526", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QEJ3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEJ3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QEJ3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEJ3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SKK0", "url": "https://www.uniprot.org/uniprotkb/F1SKK0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SKK0-1", "url": "https://www.uniprot.org/uniprotkb/F1SKK0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MELTWRLLPIALLVLCWGLRGAGAQETFLLQNLRCYNDYTSRTICRWADTQDAQRLINVTLYHRLNEDLPQPVSCDLSDDLTWLDHPCPGCVARRCVIPYKAFVIADYDYFSFRPDRPLGAQLSVTLTQHVQPPAPRGLHVSAAQGCFLLSWTVAHEGPQSPWLSSLEFEVVYRRLQDSWEDAHTIHSGSPQVTLGPEHLLPSSTYVARVRTRLAPGSGLSGRPSHWSPEVHWVSQPGDEAQPQNLQCFFDGAALLRCSWEVRSKVTSSVSFTLFYKSSPDAREKECSPVQKEDTSSPYIRHRCQIPVPDPKNHSQYIISVRPKEEEKLIKSSDNIQMAPPTLNLTKDREGYILHWKEEKMNYPHIGYIFQVQYKKDADSWEETKTEVLQKGHSMSLPPLEPATRYQARVRVKPDPGSYNGTWSKWSKEQSWDTEWVLPMWVLVFILVVTTLIVLPVLRFCGIYGYRLNRKWEEKIPNPSKSHLFQNGSAGLRLPGNMSILSSGSRPHKGPWGGGYPELEGASPVDFGHSEVSPLTTEDPKEACDLSSESGVTLGVLNLPTEPPPEPPPGLAASSGGPESRVSGFDFNGPYLGPPHSRSLPDIVGQQGPPQAGGSSKPQPPGSLEYLCLPAGGRVQLVPLAQVMGQDKARPVERGSSPGPEGSPSLESGAPHPEPGLMAGGQDPKARAPTLLPTGSWDPKDSIAASGYVTTADLTLTPPTGAPSASQAPSLNLPSDQNPSPCPGLAGGPPGSSGPLKPEFEGYVALPPTTCPFPQPPLTSPATPAVSSPVPSPGPARTDVSPGSPPPEGLLILQQVGDYCFLPGPASGPLSPQSKPTSPGPCPEIRDLSQVFQTKRPPSQAIPQVPAIQLFKALVPPRLGSSGTT", "length": 885, "header": "tr|A0A5G2QEJ3-1|A0A5G2QEJ3_PIG Isoform 1 of Colony stimulating factor 2 receptor subunit beta OS=Sus scrofa OX=9823 GN=CSF2RB PE=4 SV=1 CANONICAL=A0A5G2QEJ3-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QEJ3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEJ3/entry", "sequence": { "sequence": "MELTWRLLPIALLVLCWGLRGAGAQETFLLQNLRCYNDYTSRTICRWADTQDAQRLINVTLYHRLNEDLPQPVSCDLSDDLTWLDHPCPGCVARRCVIPYKAFVIADYDYFSFRPDRPLGAQLSVTLTQHVQPPAPRGLHVSAAQGCFLLSWTVAHEGPQSPWLSSLEFEVVYRRLQDSWEDAHTIHSGSPQVTLGPEHLLPSSTYVARVRTRLAPGSGLSGRPSHWSPEVHWVSQPGDEAQPQNLQCFFDGAALLRCSWEVRSKVTSSVSFTLFYKSSPDAREKECSPVQKEDTSSPYIRHRCQIPVPDPKNHSQYIISVRPKEEEKLIKSSDNIQMAPPTLNLTKDREGYILHWKEEKMNYPHIGYIFQVQYKKDADSWEETKTEVLQKGHSMSLPPLEPATRYQARVRVKPDPGSYNGTWSKWSKEQSWDTEWVLPMWVLVFILVVTTLIVLPVLRFCGIYGYRLNRKWEEKIPNPSKSHLFQNGSAGLRLPGNMSILSSGSRPHKGPWGGGYPELEGASPVDFGHSEVSPLTTEDPKEACDLSSESGVTLGVLNLPTEPPPEPPPGLAASSGGPESRVSGFDFNGPYLGPPHSRSLPDIVGQQGPPQAGGSSKPQPPGSLEYLCLPAGGRVQLVPLAQVMGQDKARPVERGSSPGPEGSPSLESGAPHPEPGLMAGGQDPKARAPTLLPTGSWDPKDSIAASGYVTTADLTLTPPTGAPSASQAPSLNLPSDQNPSPCPGLAGGPPGSSGPLKPEFEGYVALPPTTCPFPQPPLTSPATPAVSSPVPSPGPARTDVSPGSPPPEGLLILQQVGDYCFLPGPASGPLSPQSKPTSPGPCPEIRDLSQVFQTKRPPSQAIPQVPAIQLFKALVPPRLGSSGTT", "length": 885, "header": "tr|A0A5G2QEJ3-1|A0A5G2QEJ3_PIG Isoform 1 of Colony stimulating factor 2 receptor subunit beta OS=Sus scrofa OX=9823 GN=CSF2RB PE=4 SV=1 CANONICAL=A0A5G2QEJ3-1" }, "locus": { "chromosome": "5", "start_pos": 10832826, "end_pos": 10817686, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000085649.2", "url": "https://www.ensembl.org/id/ENSSSCT00000085649.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063095.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063095.1" } ] } }, { "isoform_ac": "F1SKK0-1", "url": "https://www.uniprot.org/uniprotkb/F1SKK0/entry", "sequence": { "sequence": "MELTWRLLPIALLVLCWGLRGAGAQETFLLQNLRCYNDYTSRTICRWADTQDAQRLINVTLYHRLNEDLPQPVSCDLSDDLTWLDHPCPGCVARRCVIPYKAFVIADYDYFSFRPDRPLGAQLSVTLTQHVQPPAPRGLHVSAAQGCFLLSWTVAHEGPQSPWLSSLEFEVVYRRLQDSWEDAHTIHSGSPQVTLGPEHLLPSSTYVARVRTRLAPGSGLSGRPSHWSPEVHWVSQPGDEAQPQNLQCFFDGAALLRCSWEVRSKVTSSVSFTLFYKSSPDAREKECSPVQKEDTSSPYIRHRCQIPVPDPKNHSQYIISVRPKEEEKLIKSSDNIQMAPPTLNLTKDREGYILHWKEEKMNYPHIGYIFQVQYKKDADSWEETKTEVLQKGHSMSLPPLEPATRYQARVRVKPDPGSYNGTWSKWMLPMWVLVFILVVTTLIVLPVLRFCGIYGYRLNRKWEEKIPNPSKSHLFQNGSAGLRLPGNMSILSSGSRPHKGPWGGGYPELEGASPVDFGHSEVSPLTTEDPKEACDLSSESGVTLGVLNLPTEPPPEPPPGLAASSGGPESRVSGFDFNGPYLGPPHSRSLPDIVGQQGPPQAGGSSKPQPPGSLEYLCLPAGGRVQLVPLAQVMGQDKARPVERGSSPGPEGSPSLESGAPHPEPGLMAGGQDPKARAPTLLPTGSWDPKDSIAASGYVTTADLTLTPPTGAPSASQAPSLNLPSDQNPSPCPGLAGGPPGSSGPLKPEFEGYVALPPTTCPFPQPPLTSPATPAVSSPVPSPGPARTDVSPGSPPPEGLLILQQVGDYCFLPGPASGPLSPQSKPTSPGPCPEIRDLSQVFQTKRPPSQAIPQVPAIQLFKALKQQDYLALPPWDVGRPGEVC", "length": 884, "header": "tr|F1SKK0-1|F1SKK0_PIG Computationally mapped isoform of Colony stimulating factor 2 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"https://www.ncbi.nlm.nih.gov/gene/100622635", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002657", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002657", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004710", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004710", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038770", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038770", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057103", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057103", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100622635", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622635", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "IQLMDPH", "url": "https://omabrowser.org/oma/group/IQLMDPH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QFC8", "url": "https://www.orthodb.org/?gene=A0A5G2QFC8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "I3LHU4", "url": "https://www.orthodb.org/?gene=I3LHU4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10361", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10361", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10361:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10361:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01758", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01758", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24690", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24690", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020936404", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020936404", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QFC8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFC8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFC8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFC8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LHU4", "url": "https://www.uniprot.org/uniprotkb/I3LHU4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LHU4-1", "url": "https://www.uniprot.org/uniprotkb/I3LHU4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVSRRGRGSPLWWPGPGGGGGHTGPAGVLGAALLLASLPWGAQGTAGAHPSAALGRAVPLARGRYLSIGDGSVMEFEFPEESEGIIVISSQYPGRGNGTGPGPALQVTSLDTEVLAIKNVSAITWGGGGGFVVSIHSGLPGLAPLYIQLVDPHEAPPKLIEERRDFRIKVSPAEDPPATLGAGLAHFSENPILYLLLPLIFVNKCSFGCKVELEVLKGLLQSPQPMLLGLLGQFLVMPFYAFLMAKVFMLPKALALGLILTCSSPGGGGSYLFSLLLGGDVTLAISMTFISTVAATGFLPLSSAVYSRLLSIHETLHVPISKILGTLLFIAIPIAAGVVIKSKLPKFSQLLLQVIKPFSFVLLLGGLFLAYRMGVFILAGVRLPIVLVGLTVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQLSLRRLQADYASQAPFIVALSGTSEMLALVIGHFIYSSVCTVP", "length": 477, "header": "tr|A0A5G2QFC8-1|A0A5G2QFC8_PIG Isoform 1 of P3 protein OS=Sus scrofa OX=9823 GN=SLC10A3 PE=3 SV=1 CANONICAL=A0A5G2QFC8-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QFC8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFC8/entry", "sequence": { "sequence": "MVSRRGRGSPLWWPGPGGGGGHTGPAGVLGAALLLASLPWGAQGTAGAHPSAALGRAVPLARGRYLSIGDGSVMEFEFPEESEGIIVISSQYPGRGNGTGPGPALQVTSLDTEVLAIKNVSAITWGGGGGFVVSIHSGLPGLAPLYIQLVDPHEAPPKLIEERRDFRIKVSPAEDPPATLGAGLAHFSENPILYLLLPLIFVNKCSFGCKVELEVLKGLLQSPQPMLLGLLGQFLVMPFYAFLMAKVFMLPKALALGLILTCSSPGGGGSYLFSLLLGGDVTLAISMTFISTVAATGFLPLSSAVYSRLLSIHETLHVPISKILGTLLFIAIPIAAGVVIKSKLPKFSQLLLQVIKPFSFVLLLGGLFLAYRMGVFILAGVRLPIVLVGLTVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQLSLRRLQADYASQAPFIVALSGTSEMLALVIGHFIYSSVCTVP", "length": 477, "header": "tr|A0A5G2QFC8-1|A0A5G2QFC8_PIG Isoform 1 of P3 protein OS=Sus scrofa OX=9823 GN=SLC10A3 PE=3 SV=1 CANONICAL=A0A5G2QFC8-1" }, "locus": { "chromosome": "X", "start_pos": 125011790, "end_pos": 125010360, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000073579.2", "url": "https://www.ensembl.org/id/ENSSSCT00000073579.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067978.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067978.1" } ] } }, { "isoform_ac": "I3LHU4-1", "url": "https://www.uniprot.org/uniprotkb/I3LHU4/entry", "sequence": { "sequence": "MVSRRGRGSPLWWPGPGGGGGHTGPAGVLGAALLLASLPWGAQGTAGAHPSAALGRAVPLARGRYLSIGDGSVMEFEFPEESEGIIVISSQYPGRGNGTGPGPALQVTSLDTEVLAIKNLVDPHEAPPKLIEERRDFRIKVSPAEDPPATLGAGLAHFSENPILYLLLPLIFVNKCSFGCKVELEVLKGLLQSPQPMLLGLLGQFLVMPFYAFLMAKVFMLPKALALGLILTCSSPGGGGSYLFSLLLGGDVTLAISMTFISTVAATGFLPLSSAVYSRLLSIHETLHVPISKILGTLLFIAIPIAAGVVIKSKLPKFSQLLLQVIKPFSFVLLLGGLFLAYRMGVFILAGVRLPIVLVGLTVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQLSLRRLQADYASQAPFIVALSGTSEMLALVIGHFIYSSVCTVP", "length": 448, "header": "tr|I3LHU4-1|A0A5G2QFC8_PIG Computationally mapped isoform of P3 protein OS=Sus scrofa OX=9823 GN=SLC10A3 PE=3 SV=2 CANONICAL=A0A5G2QFC8-1" }, "locus": { "chromosome": "X", "start_pos": 125011790, "end_pos": 125010360, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031822.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031822.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023641.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023641.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LHU4", "url": "https://www.uniprot.org/uniprotkb/I3LHU4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100622635", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622635", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "P09131-1", "protein_name": "P3 protein", "gene_name": "SLC10A3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVLMQDKGSSQQWPGLGGEGGGTGPLSMLRAALLLISLPWGAQGTASTSLSTAGGHTVPPTGGRYLSIGDGSVMEFEFPEDSEGIIVISSQYPGQANRTAPGPMLRVTSLDTEVLTIKNVSAITWGGGGGFVVSIHSGLAGLAPLHIQLVDAHEAPPTLIEERRDFCIKVSPAEDTPATLSADLAHFSENPILYLLLPLIFVNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALALGLIITCSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHETLHVPISKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFLAYRMGVFILAGIRLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQLSLRRLQADYASQAPFIVALSGTSEMLALVIGHFIYSSLFPVP", "length": 477 }, "evidence": [ { "id": "A0A5G2QFC8", "url": "https://omabrowser.org/oma/group/A0A5G2QFC8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P21129-1", "protein_name": "P3 protein", "gene_name": "Slc10a3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVVKKSRGSSQQLPGLGGQGGCTGFVGMLGTALLFISLPWGAQVMASANISTALGHTSGHYLSIGDGSVTEFDFPEKSEGIIVISSQYTGQTNGTGPSPILKVISLDTEVLTIKNVSAITWSSGGGFVVGIHSGLAGLAPLHLQLMDFYEAPPLLIEERRDFCIRVSPAEDLPSALNTNLGHFSENPILYLLLPLIFVNKCSFGCKVELEVLKELLQSPQPMLLGLLGQFLVMPFYAFLMAKVFMLPKALALGLIITCSSPGGGGSYLFSLLLGGDVTLAISMTFISTVAATGFLPLSSAIYSYLLSIHETLHVPISKILGTLLFIAIPIAAGVVIKSKLPKFSELLLQVIKPFSFILLLGGLFLAYHMGVFILVGVRLPIVLVGFTVPLVGLLVGYSLAICLKLPVAQRRTVSIEVGVQNSLLALAMLQLSLRRLQADYASQAPFIVALSGTSEMLALVIGQFIYSILFPVP", "length": 473 }, "evidence": [ { "id": "A0A5G2QFC8", "url": "https://omabrowser.org/oma/group/A0A5G2QFC8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q0V8N6-1", "protein_name": "P3 protein", "gene_name": "SLC10A3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVFRSGEGHSLQWPGPEGGTGCTGPQSMLRATLLLVSLLWGARGTPSASLSPALGHPMPLTRGRYLSIGDGSVMEFEFPEESEGIIVITSQYPGQGNGTGPSPMLRVTSLDPEVLAIKNVSSIALGSGGSFVVSIRSGLPGIAPLHIQLTDPREAPPRLIEERRDFCIKVSPAEDTPITLGTDLVHFSENPILYLLLPLIFVNKCSFGCKVELEVLKGLLQNPQPMLLGLLGQFLVMPFYAFLMAKVFMLPKALALGLIITCSSPGGGGSYLFSLLLGGDVTLAISMTFISTVAATGFLPLSSAIYSRLLSIHETLHVPVSKILGTLLFIAIPIAAGVVIKSKLPKFSQLLLHVIKPFSFVLLLGGLFLAYRMGVFILAGVRLPIVLVGFTVPLVGLLVGYGLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQLSLRRLQADYASQAPFLVALSGTSEMLALVIGHFIYSSVCAVP", "length": 477 }, "evidence": [ { "id": "A0A5G2QFC8", "url": "https://omabrowser.org/oma/group/A0A5G2QFC8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5RJP6-1", "protein_name": "Solute carrier family 10, member 3", "gene_name": "Slc10a3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVVRKSRDSSQQLPGLRGQGGCTGFVGMLGTALLFISLTWGAQVMASANISTALGHRIGHYLSIGDGSVTEFDFPEKSEGIIVISSQYTGQANGTGPSPTLRVISLDTEVLTVKNVSAITWGSGGGFVVSIHSGLAGLAPLHLQLMDSHEAPPLLIEERRDFCIRVSPAEDLSSALNANLGHFSENPILYLLLPLIFVNKCSFGCKVELEVLKELLQSPQPMLLGLLGQFLVMPFYAFLMAKVFMLPKALALGLIITCSSPGGGGSYLFSLLLGGDVTLAISMTFISTVAATGFLPLSSAIYSYLLSIHETLHVPISKILGTLLFIAIPIAAGVVIKSKLPKFSELLLQVIKPFSFVLLLGGLFLAYHMGVFILVGVRLPIVLVGFTVPLVGLLVGYSLAICLKLPVAQRRTVSIEVGVQNSLLALAMLQLSLRRLQADYASQAPFIVALSGTSEMLVLVIGQFIYSSFFPVP", "length": 473 }, "evidence": [ { "id": "A0A5G2QFC8", "url": "https://omabrowser.org/oma/group/A0A5G2QFC8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFC8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFC8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "bile acid and bile salt transport", "id": "GO:0015721", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015721", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFC8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFC8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "bile acid:sodium symporter activity", "id": "GO:0008508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008508", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFC8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFC8" } ], "pmid": "" }, { "name": "symporter activity", "id": "GO:0015293", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015293", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFC8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFC8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 119, "end_pos": 121, "annotation": "n_glycosylation_sequon" }, { "start_pos": 97, "end_pos": 99, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QFC8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFC8" }, { "id": "PF24690", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24690" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "NTCP5/P3 N-terminal", "eco_id": "ECO_0000259", "start_pos": 64, "end_pos": 172, "start_aa": "Arg", "end_aa": "Pro", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 119, "end_pos": 121 }, { "start_pos": 97, "end_pos": 99 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, 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Classification" ] }, { "id": "PTHR26453", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR26453", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13853", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13853", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003130055", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130055", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QFL3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFL3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFL3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFL3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTNKSLVTTFILAGLPHPPQLDTLLFATFLLIYVLSVLGNLLILLVITVDPHLHTPMYFFLTNLSFIDMWFSTVTVPKVLMSLVSPAGGALSFHSCVAQLYSFHFLGSTECFLYTVMSYDRYLAISHPLRYSGLMRGRTCALLATTTWLSGALHSAVQTTLTFRLPYCGPSRIQHYFCDAPPILKLACADTSAVEMVIFINIGVVASGCFLLIVLSYVSIVCSILKIRTSEGRHRAFQTCASHCIVVLCFFVPCVFIYLRPGSKAAVDGVVAVFYTVLTPLLNPVVYTLRNKEVKKALLKLKDKVAYSRDK", "length": 311, "header": "tr|A0A5G2QFL3-1|A0A5G2QFL3_PIG Isoform 1 of G-protein coupled receptors family 1 profile domain-containing protein OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A5G2QFL3-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QFL3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFL3/entry", "sequence": { "sequence": "MTNKSLVTTFILAGLPHPPQLDTLLFATFLLIYVLSVLGNLLILLVITVDPHLHTPMYFFLTNLSFIDMWFSTVTVPKVLMSLVSPAGGALSFHSCVAQLYSFHFLGSTECFLYTVMSYDRYLAISHPLRYSGLMRGRTCALLATTTWLSGALHSAVQTTLTFRLPYCGPSRIQHYFCDAPPILKLACADTSAVEMVIFINIGVVASGCFLLIVLSYVSIVCSILKIRTSEGRHRAFQTCASHCIVVLCFFVPCVFIYLRPGSKAAVDGVVAVFYTVLTPLLNPVVYTLRNKEVKKALLKLKDKVAYSRDK", "length": 311, "header": "tr|A0A5G2QFL3-1|A0A5G2QFL3_PIG Isoform 1 of G-protein coupled receptors family 1 profile domain-containing protein OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A5G2QFL3-1" }, "locus": { "chromosome": "9", "start_pos": 50953131, "end_pos": 50952199, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069837.1", "url": "https://www.ensembl.org/id/ENSSSCT00000069837.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062540.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062540.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFL3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFL3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100518267", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518267", "resource": "KEGG Pathway" }, { "id": "ssc:100518623", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518623", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "G3N2K0-1", "protein_name": "Olfactory receptor family 10 subfamily G member 9E", "gene_name": "OR10G9E", "tax_id": 9913, "organism": "Bos taurus", "sequence": { 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"https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1ABU1-1", "protein_name": "Paralemmin-1", "gene_name": "PALM", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MELRPACTGQKSMNLFAGAHETRAVEANTLQQERLQAIAEKRKRQTEIENKRRQLEDDRRQLQHLKSKALRERWLLEGAPSSASEEDEAMKKQMQEDEVKTKELEETIQRLERELESLENSSSATSTKENLAEAAAPAKEEKKENIPSVQKSPLGTAIAEKKVSSSPMKAVQGTDMMKAAMYSVEITVEKDRVTGETKVLSSTTLLPQNHCVQGIKVYEDELKVVHAVSAEDGALQNGAQPLSSSEVDELLHKADEVTLGEATASGDAPGSATSSQKATPRREITGLQAKPRENSTEGAEPSREQPVTMIFMGYQNVEDENETKKVLGLEGTIKAELVVIEDAESKAEPEGKDHAPPNGTALEPAAAPLQGDEVPGGQKPGTNATEAKEAEPDMDAKKQRCKCCTVM", "length": 407 }, "evidence": [ { "id": "A0A5G2QJ80", "url": "https://omabrowser.org/oma/group/A0A5G2QJ80/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1N3Q4-1", "protein_name": "Paralemmin-1", "gene_name": "PALM", "tax_id": 9913, "organism": "Bos taurus", "sequence": { 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"url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ80" } ], "pmid": "" }, { "name": "postsynapse", "id": "GO:0098794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098794", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJ80", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ80" } ], "pmid": "" }, { "name": "filopodium", "id": "GO:0030175", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030175", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJ80", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ80" } ], "pmid": "" }, { "name": "filopodium membrane", "id": "GO:0031527", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031527", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJ80", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ80" } ], "pmid": "" }, { "name": "synaptic membrane", "id": "GO:0097060", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097060", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJ80", "url": 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"authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QG88-1", "uniprot_ac": "A0A5G2QG88", "uniprot_id": "A0A5G2QG88_PIG", "mass": { "chemical_mass": 76801.0, "monoisotopic_mass": 76801.0 }, "refseq": {}, "gene_names": [ { "name": "PLK2", "type": "recommended", "evidence": [ { "id": "A0A5G2QG88", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ] } ], "protein_names": [ { "name": "Serine/threonine-protein kinase PLK", "type": "recommended", "evidence": [ { "id": "A0A5G2QG88", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88/entry#names_and_taxonomy" } ] }, { "name": "2.7.11.21", "type": "synonym", "evidence": [ { "id": "A0A5G2QG88", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88/entry#names_and_taxonomy" } ] }, { "name": "Polo-like kinase", "type": "synonym", "evidence": [ { "id": "A0A5G2QG88", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PLK2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88", "locus": { "chromosome": "16", "start_pos": 37299119, "end_pos": 37305114, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016925", "url": "https://www.ensembl.org/id/ENSSSCG00000016925" } ] } } ], "crossref": [ { "id": "A0A5G2QG88", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QG88", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000016925", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016925", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd13117", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13117", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd13118", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13118", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd14188", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd14188", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "397251", "url": "https://www.ncbi.nlm.nih.gov/gene/397251", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000719", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000719", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000959", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000959", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008271", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008271", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011009", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011009", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017441", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017441", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR033695", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033695", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR033701", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033701", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036947", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036947", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042825", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042825", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:397251", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:397251", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NMPESDH", "url": "https://omabrowser.org/oma/group/NMPESDH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SLJ2", "url": "https://www.orthodb.org/?gene=F1SLJ2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24345", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24345", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24345:SF44", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24345:SF44", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00069", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00069", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00659", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00659", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6804115", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6804115", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "17989", "url": "https://www.rhea-db.org/rhea/17989", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "46608", "url": "https://www.rhea-db.org/rhea/46608", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QG88-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SLJ2", "url": "https://www.uniprot.org/uniprotkb/F1SLJ2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SLJ2-1", "url": "https://www.uniprot.org/uniprotkb/F1SLJ2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MELLRTITYQPAASTKMCEQALGKACGGDSKKKRPQPPPEEPQQPQPQAQVQPVISRIIVDPTTGKRYCRGKVLGKGGFAKCYEMTDLTNNKVYAAKIIPHSRVAKPHQREKIDKEIELHRILHHKHVVQFYHYFEDKENIYILLEYCSRRSMAHILKARKVLTEPEVRYYLRQIVSGLKYLHEQEILHRDLKLGNFFINEAMELKVGDFGLAARLEPLEHRRRTICGTPNYLSPEVLNKQGHGCESDIWALGCVMYTMLLGRPPFETTNLKETYRCIREARYTMPSSLLAPAKHLIASMLSKNPEDRPSLDDIIRHEFFLQGFTPDRLSSSCCHTVPDFHLSSPAKNFFKKAAAALFGGKKDKARYIDTHNRVSKEDEEIYKLRHDLKKTSITQQPSKHRTDEELQPPTTTVARSGTPAVENKQQIGDAIRMIVRGTLGSCSSSSECLEDSTMGSVADTVARVLRGCLENMPEADCIPKEQLSTSFQWVTKWVDYSNKYGFGYQLSDHTVGVLFNNGAHMSLLPDKKTVHYYAELGQCSVFPATDAPEQFISQVTVLKYFSHYMEENLMDGGDLPSVTDVRRPRLYLLQWLKSDKALMMLFNDGTFQVNFYHDHTKIIICSQNEEYLLTYINEDRISTTFRLTTLLMSGCSLELKNRMEYALNMLLQRCN", "length": 671, "header": "tr|A0A5G2QG88-1|A0A5G2QG88_PIG Isoform 1 of Serine/threonine-protein kinase PLK OS=Sus scrofa OX=9823 GN=PLK2 PE=3 SV=1 CANONICAL=A0A5G2QG88-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QG88-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88/entry", "sequence": { "sequence": "MELLRTITYQPAASTKMCEQALGKACGGDSKKKRPQPPPEEPQQPQPQAQVQPVISRIIVDPTTGKRYCRGKVLGKGGFAKCYEMTDLTNNKVYAAKIIPHSRVAKPHQREKIDKEIELHRILHHKHVVQFYHYFEDKENIYILLEYCSRRSMAHILKARKVLTEPEVRYYLRQIVSGLKYLHEQEILHRDLKLGNFFINEAMELKVGDFGLAARLEPLEHRRRTICGTPNYLSPEVLNKQGHGCESDIWALGCVMYTMLLGRPPFETTNLKETYRCIREARYTMPSSLLAPAKHLIASMLSKNPEDRPSLDDIIRHEFFLQGFTPDRLSSSCCHTVPDFHLSSPAKNFFKKAAAALFGGKKDKARYIDTHNRVSKEDEEIYKLRHDLKKTSITQQPSKHRTDEELQPPTTTVARSGTPAVENKQQIGDAIRMIVRGTLGSCSSSSECLEDSTMGSVADTVARVLRGCLENMPEADCIPKEQLSTSFQWVTKWVDYSNKYGFGYQLSDHTVGVLFNNGAHMSLLPDKKTVHYYAELGQCSVFPATDAPEQFISQVTVLKYFSHYMEENLMDGGDLPSVTDVRRPRLYLLQWLKSDKALMMLFNDGTFQVNFYHDHTKIIICSQNEEYLLTYINEDRISTTFRLTTLLMSGCSLELKNRMEYALNMLLQRCN", "length": 671, "header": "tr|A0A5G2QG88-1|A0A5G2QG88_PIG Isoform 1 of Serine/threonine-protein kinase PLK OS=Sus scrofa OX=9823 GN=PLK2 PE=3 SV=1 CANONICAL=A0A5G2QG88-1" }, "locus": { "chromosome": "16", "start_pos": 37304989, "end_pos": 37299718, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083840.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083840.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063283.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063283.1" } ] } }, { "isoform_ac": "F1SLJ2-1", "url": "https://www.uniprot.org/uniprotkb/F1SLJ2/entry", "sequence": { "sequence": "MELLRTITYQPAASTKMCEQALGKACGGDSKKKRPQPPPEEPQQPQPQAQVQPVAPHHHHHHSHSGAEISRIIVDPTTGKRYCRGKVLGKGGFAKCYEMTDLTNNKVYAAKIIPHSRVAKPHQREKIDKEIELHRILHHKHVVQFYHYFEDKENIYILLEYCSRRSMAHILKARKVLTEPEVRYYLRQIVSGLKYLHEQEILHRDLKLGNFFINEAMELKVGDFGLAARLEPLEHRRRTICGTPNYLSPEVLNKQGHGCESDIWALGCVMYTMLLGRPPFETTNLKETYRCIREARYTMPSSLLAPAKHLIASMLSKNPEDRPSLDDIIRHEFFLQGFTPDRLSSSCCHTVPDFHLSSPAKNFFKKAAAALFGGKKDKARYIDTHNRVSKEDEEIYKLRHDLKKTSITQQPSKHRTDEELQPPTTTVARSGTPAVENKQQIGDAIRMIVRGTLGSCSSSSECLEDSTMGSVADTVARVLRGCLENMPEADCIPKEQLSTSFQWVTKWVDYSNKYGFGYQLSDHTVGVLFNNGAHMSLLPDKKTVHYYAELGQCSVFPATDAPEQFISQVTVLKYFSHYMEENLMDGGDLPSVTDVRRPRLYLLQWLKSDKALMMLFNDGTFQVNFYHDHTKIIICSQNEEYLLTYINEDRISTTFRLTTLLMSGCSLELKNRMEYALNMLLQRCN", "length": 685, "header": "tr|F1SLJ2-1|A0A5G2QG88_PIG Computationally mapped isoform of Serine/threonine-protein kinase PLK OS=Sus scrofa OX=9823 GN=PLK2 PE=3 SV=1 CANONICAL=A0A5G2QG88-1" }, "locus": { "chromosome": "16", "start_pos": 37304989, "end_pos": 37299718, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018432.5", "url": "https://www.ensembl.org/id/ENSSSCT00000018432.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017934.2", "url": "https://www.ensembl.org/id/ENSSSCP00000017934.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SLJ2", "url": "https://www.uniprot.org/uniprotkb/F1SLJ2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:397251", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:397251", "resource": "KEGG Pathway" }, { "id": "R-SSC-6804115", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6804115", "resource": "Reactome", "description": "TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain" } ], "orthologs": [ { "uniprot_canonical_ac": "F1NB57-1", "protein_name": "Serine/threonine-protein kinase PLK", "gene_name": "PLK2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MELLRTIAYPPGGGGASSTTAAARGCEAAVGRAGSAEPRRKKAEEQPHQHAHPAAEVSRIITDPTTGKRYCRGKVLGKGGFAKCYEMTDLTTNKVYAAKIIPHSRVAKPHQREKIDKEIELHRMLNHRHVVQFYHYFEDRENIYILLEYCSRRSMAHILKARKVLTEPEVRYYLRQIVSGLKYLHEQEILHRDLKLGNFFINENMELKLGDFGLAARLEPLEHRRRTICGTPNYLSPEVLNKQGHGCESDIWALGCVMYTMLLGRPPFETTNLKETYRCIREARYSLPSSLLAPAKHLIASMLSKNPEDRPSLDEIIRHDFFVQGFTPDRLSASCCHTVPDFHLSSPAKNFFKKAAAALFGGKKDKARYFDNHNRLAKEDEEIYKLRHDLKKTSITQQPQKHRTDEEIQPLITTVAKPGALPETKQIGDSIRMIVRGTLGSCSSSSECLEDSTMGSVADTVARVLRGCLENMPEADSIPKEQLTTSFQWVTKWVDYSNKYGFGYQLSDHTVGVLFNNGAHMSLLPDKKTVHYYAELGQCSVFTAAEAPEQFISQVTVLKYFSHYMEENLMDGGDLPSLTDVRRPRLYLLQWLKSDKALMMLFNDGTFQVNFYHDHTKIIICNQSEEYLLTYINEDRISTTFRLTTLLVSGCSLELKRRMEYALNMLLQRCN", "length": 671 }, "evidence": [ { "id": "A0A5G2QG88", "url": "https://omabrowser.org/oma/group/A0A5G2QG88/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "P53351-1", "protein_name": "Serine/threonine-protein kinase PLK2", "gene_name": "Plk2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MELLRTITYQPAAGTKMCEQALGKACGGDSKKKRPQQPSEDGQPQAQVTPAAPHHHHHHSHSGPEISRIIVDPTTGKRYCRGKVLGKGGFAKCYEMTDLTNNKVYAAKIIPHSRVAKPHQREKIDKEIELHRLLHHKHVVQFYHYFEDKENIYILLEYCSRRSMAHILKARKVLTEPEVRYYLRQIVSGLKYLHEQEILHRDLKLGNFFINEAMELKVGDFGLAARLEPLEHRRRTICGTPNYLSPEVLNKQGHGCESDIWALGCVMYTMLLGRPPFETTNLKETYRCIREARYTMPSSLLAPAKHLIASMLSKNPEDRPSLDDIIRHDFFLQGFTPDRLSSSCCHTVPDFHLSSPAKNFFKKAAAALFGGKKDKARYNDTHNKVSKEDEDIYKLRHDLKKVSITQQPSKHRADEEPQPPPTTVARSGTSAVENKQQIGDAIRMIVRGTLGSCSSSSECLEDSTMGSVADTVARVLRGCLENMPEADCIPKEQLSTSFQWVTKWVDYSNKYGFGYQLSDHTVGVLFNNGAHMSLLPDKKTVHYYAELGQCSVFPATDAPEQFISQVTVLKYFSHYMEENLMDGGDLPSVTDIRRPRLYLLQWLKSDKALMMLFNDGTFQVNFYHDHTKIIICNQSEEYLLTYINEDRISTTFRLTTLLMSGCSLELKNRMEYALNMLLQRCN", "length": 682 }, "evidence": [ { "id": "A0A5G2QG88", "url": "https://omabrowser.org/oma/group/A0A5G2QG88/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NYY3-1", "protein_name": "Serine/threonine-protein kinase PLK2", "gene_name": "PLK2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MELLRTITYQPAASTKMCEQALGKGCGADSKKKRPPQPPEESQPPQSQAQVPPAAPHHHHHHSHSGPEISRIIVDPTTGKRYCRGKVLGKGGFAKCYEMTDLTNNKVYAAKIIPHSRVAKPHQREKIDKEIELHRILHHKHVVQFYHYFEDKENIYILLEYCSRRSMAHILKARKVLTEPEVRYYLRQIVSGLKYLHEQEILHRDLKLGNFFINEAMELKVGDFGLAARLEPLEHRRRTICGTPNYLSPEVLNKQGHGCESDIWALGCVMYTMLLGRPPFETTNLKETYRCIREARYTMPSSLLAPAKHLIASMLSKNPEDRPSLDDIIRHDFFLQGFTPDRLSSSCCHTVPDFHLSSPAKNFFKKAAAALFGGKKDKARYIDTHNRVSKEDEDIYKLRHDLKKTSITQQPSKHRTDEELQPPTTTVARSGTPAVENKQQIGDAIRMIVRGTLGSCSSSSECLEDSTMGSVADTVARVLRGCLENMPEADCIPKEQLSTSFQWVTKWVDYSNKYGFGYQLSDHTVGVLFNNGAHMSLLPDKKTVHYYAELGQCSVFPATDAPEQFISQVTVLKYFSHYMEENLMDGGDLPSVTDIRRPRLYLLQWLKSDKALMMLFNDGTFQVNFYHDHTKIIICSQNEEYLLTYINEDRISTTFRLTTLLMSGCSSELKNRMEYALNMLLQRCN", "length": 685 }, "evidence": [ { "id": "A0A5G2QG88", "url": "https://omabrowser.org/oma/group/A0A5G2QG88/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9R012-1", "protein_name": "Serine/threonine-protein kinase PLK2", "gene_name": "Plk2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELLRTITYQPAAGTKMCEQALGKACGGDSKKKRPQQPSEDGQSQAQVTPAAPHHHHHHSHSGPEISRIIVDPTTGKRYCRGKVLGKGGFAKCYEMTDLTNNKVYAAKIIPHSRVAKPHQREKIDKEIELHRILHHKHVVQFYHYFEDKENIYILLEYCSRRSMAHILKARKVLTEPEVRYYLRQIVSGLKYLHEQEILHRDLKLGNFFINEAMELKVGDFGLAARLEPLEHRRRTICGTPNYLSPEVLNKQGHGCESDIWALGCVMYTMLLGRPPFETTNLKETYRCIREARYTMPSSLLAPAKHLIASMLSKNPEDRPSLDDIIRHDFFLQGFTPDRLSSSCCHTVPDFHLSSPAKNFFKKAAAALFGGKKDKARYNDTHNKVSKEDEDIYKLRHDLKKTSITQQPSKHRTDEELQPPPTTFAKSGTSAVENKQQIGDAIRMIVRGTLGSCSSSSECLEDSTMGSVADTVARVLRGCLENMPEADCIPKEQLSTSFQWVTKWVDYSNKYGFGYQLSDHTVGVLFNNGAHMSLLPDKKTVHYYAELGQCSVFPATDAPEQFISQVTVLKYFSHYMEENLMDGGDLPSVTDIRRPRLYLLQWLKSDKALMMLFNDGTFQVNFYHDHTKIIICNQNEEYLLTYINEDRISTTFRLTTLLMSGCSLELKHRMEYALNMLLQRCN", "length": 682 }, "evidence": [ { "id": "A0A5G2QG88", "url": "https://omabrowser.org/oma/group/A0A5G2QG88/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "pmid": "" }, { "name": "ATP-dependent protein binding", "id": "GO:0043008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043008", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 8, "go_terms": [ { "name": "dendrite", "id": "GO:0030425", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030425", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "pmid": "" }, { "name": "centriole", "id": "GO:0005814", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005814", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "pmid": "" }, { "name": "spindle pole", "id": "GO:0000922", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000922", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "pmid": "" }, { "name": "centrosome", "id": "GO:0005813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005813", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "pmid": "" }, { "name": "kinetochore", "id": "GO:0000776", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000776", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 11, "go_terms": [ { "name": "memory", "id": "GO:0007613", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007613", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "pmid": "" }, { "name": "regulation of synaptic plasticity", "id": "GO:0048167", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048167", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "pmid": "" }, { "name": "positive regulation of cell migration involved in sprouting angiogenesis", "id": "GO:0090050", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090050", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "pmid": "" }, { "name": "negative regulation of cellular senescence", "id": "GO:2000773", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000773", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "pmid": "" }, { "name": "positive regulation of autophagy", "id": "GO:0010508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010508", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "pmid": "" }, { "name": "negative regulation of angiogenesis", "id": "GO:0016525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016525", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "pmid": "" }, { "name": "G1/S transition of mitotic cell cycle", "id": "GO:0000082", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000082", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "pmid": "" }, { "name": "positive regulation of protein catabolic process", "id": "GO:0045732", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045732", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "pmid": "" }, { "name": "regulation of centriole replication", "id": "GO:0046599", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046599", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "pmid": "" }, { "name": "mitotic spindle organization", "id": "GO:0007052", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007052", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "pmid": "" }, { "name": "negative regulation of apoptotic process in bone marrow cell", "id": "GO:0071866", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071866", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "17989", "name": "", "equation": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "17989", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/17989" } ] }, { "id": "46608", "name": "", "equation": "L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "46608", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/46608" } ] }, { "id": "R-SSC-6801666", "name": "PLK2 phosphorylates CENPJ", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [ "R-SSC-380291" ], "output_participant_list": [ "R-SSC-6801670" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6801666", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6801666" } ] }, { "id": "R-SSC-6801675", "name": "PLK2 phosphorylates NPM1", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [ "R-SSC-3008211" ], "output_participant_list": [ "R-SSC-6801679" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6801675", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6801675" } ] } ], "reaction_participants": [ { "participant_id": "R-SSC-3008211", "participant_name": "NPM1 [cytosol]", "crossref": [ { "id": "I3LUP6", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000016998", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCP00000027846", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000028813", "database": "ENSEMBL", "url": "" }, { "id": "XP_013846116.1", "database": "RefSeq", "url": "" }, { "id": "104010", "database": "VGNC", "url": "" } ] }, { "participant_id": "R-SSC-380291", "participant_name": "CENPJ [cytosol]", "crossref": [ { "id": "XP_020921072.1", "database": "RefSeq", "url": "" }, { "id": "XP_020921071.1", "database": "RefSeq", "url": "" }, { "id": "XP_020921074.1", "database": "RefSeq", "url": "" }, { "id": "86550", "database": "VGNC", "url": "" }, { "id": "I3LLB9", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000029393", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCP00000024887", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000026789", "database": "ENSEMBL", "url": "" }, { "id": "XP_020921075.1", "database": "RefSeq", "url": "" } ] }, { "participant_id": "R-SSC-6801670", "participant_name": "phospho-CENPJ [cytosol]", "crossref": [ { "id": "XP_020921071.1", "database": "RefSeq", "url": "" }, { "id": "ENSSSCP00000024887", "database": "ENSEMBL", "url": "" }, { "id": "86550", "database": "VGNC", "url": "" }, { "id": "XP_020921075.1", "database": "RefSeq", "url": "" }, { "id": "I3LLB9", "database": "UniProt", "url": "" }, { "id": "ENSSSCT00000026789", "database": "ENSEMBL", "url": "" }, { "id": "XP_020921074.1", "database": "RefSeq", "url": "" }, { "id": "XP_020921072.1", "database": "RefSeq", "url": "" }, { "id": "ENSSSCG00000029393", "database": "ENSEMBL", "url": "" } ] }, { "participant_id": "R-SSC-6801679", "participant_name": "phospho-NPM1 [cytosol]", "crossref": [ { "id": "ENSSSCP00000027846", "database": "ENSEMBL", "url": "" }, { "id": "I3LUP6", "database": "UniProt", "url": "" }, { "id": "XP_013846116.1", "database": "RefSeq", "url": "" }, { "id": "104010", "database": "VGNC", "url": "" }, { "id": "ENSSSCT00000028813", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCG00000016998", "database": "ENSEMBL", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QG88-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 671, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QG88-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QG88" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QG88", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" }, { "id": "PS50078", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50078" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "POLO box", "eco_id": "ECO_0000259", "start_pos": 489, "end_pos": 567, "start_aa": "Trp", "end_aa": "Glu", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A5G2QG88", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG88" }, { "id": "PS50011", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50011" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Protein kinase", "eco_id": "ECO_0000259", "start_pos": 68, "end_pos": 320, "start_aa": "Tyr", "end_aa": "Phe", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QKD9-1", "uniprot_ac": "A0A5G2QKD9", "uniprot_id": "A0A5G2QKD9_PIG", "mass": { "chemical_mass": 28466.0, "monoisotopic_mass": 28466.0 }, "refseq": {}, "gene_names": [ { "name": "PRDX3", "type": "recommended", "evidence": [ { "id": "A0A5G2QKD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9" } ] } ], "protein_names": [ { "name": "Thioredoxin-dependent peroxide reductase, mitochondrial", "type": "recommended", "evidence": [ { "id": "A0A5G2QKD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9/entry#names_and_taxonomy" } ] }, { "name": "1.11.1.24", "type": "synonym", "evidence": [ { "id": "A0A5G2QKD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9/entry#names_and_taxonomy" } ] }, { "name": "Thioredoxin-dependent peroxiredoxin 3", "type": "synonym", "evidence": [ { "id": "A0A5G2QKD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. Acts synergistically with MAP3K13 to regulate the activation of NF-kappa-B in the cytosol. Required for the maintenance of physical strength.", "evidence": [ { "database": "UniProtKB", "id": "F1S418", "url": "https://www.uniprot.org/uniprotkb/F1S418#function" }, { "database": "UniProtKB", "id": "ARBA00045559", "url": "https://www.uniprot.org/uniprotkb/ARBA00045559#function" }, { "database": "UniProtKB", "id": "A0A5G2QKD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PRDX3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9", "locus": { "chromosome": "14", "start_pos": 129079051, "end_pos": 129090830, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000010682", "url": "https://www.ensembl.org/id/ENSSSCG00000010682" } ] } } ], "crossref": [ { "id": "A0A5G2QKD9", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QKD9", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000010682", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000010682", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd03015", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03015", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100154143", "url": "https://www.ncbi.nlm.nih.gov/gene/100154143", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "F1S418", "url": "https://www.ebi.ac.uk/intact/interactors/id:F1S418*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR000866", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000866", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013766", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013766", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019479", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019479", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036249", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036249", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050217", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050217", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100154143", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154143", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KDSKQYF", "url": "https://omabrowser.org/oma/group/KDSKQYF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1S418", "url": "https://www.orthodb.org/?gene=F1S418", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10681", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10681", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10681:SF128", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10681:SF128", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00578", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00578", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF10417", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10417", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-3299685", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3299685", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "62620", "url": "https://www.rhea-db.org/rhea/62620", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QKD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QKD9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S418", "url": "https://www.uniprot.org/uniprotkb/F1S418", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S418-1", "url": "https://www.uniprot.org/uniprotkb/F1S418-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "LFRAAPAAYGSSQAGVIRHVSAVPWGISASAALRPAPSRRTCLTSVLWSGSSQAKFAFSTSSSHHSPAVTQHAPYFKGTAVVNGEFKELSLDDYKGKYLVLFFYPLDFTFVCPTEIIAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQFVETHGEVCPANWTPDSPTIKPHPTDSKEYFEKVHQ", "length": 260, "header": "tr|A0A5G2QKD9-1|A0A5G2QKD9_PIG Isoform 1 of Thioredoxin-dependent peroxide reductase, mitochondrial OS=Sus scrofa OX=9823 GN=PRDX3 PE=1 SV=1 CANONICAL=A0A5G2QKD9-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QKD9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9/entry", "sequence": { "sequence": "LFRAAPAAYGSSQAGVIRHVSAVPWGISASAALRPAPSRRTCLTSVLWSGSSQAKFAFSTSSSHHSPAVTQHAPYFKGTAVVNGEFKELSLDDYKGKYLVLFFYPLDFTFVCPTEIIAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQFVETHGEVCPANWTPDSPTIKPHPTDSKEYFEKVHQ", "length": 260, "header": "tr|A0A5G2QKD9-1|A0A5G2QKD9_PIG Isoform 1 of Thioredoxin-dependent peroxide reductase, mitochondrial OS=Sus scrofa OX=9823 GN=PRDX3 PE=1 SV=1 CANONICAL=A0A5G2QKD9-1" }, "locus": { "chromosome": "14", "start_pos": 129089560, "end_pos": 129079823, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088511.2", "url": "https://www.ensembl.org/id/ENSSSCT00000088511.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062532.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062532.1" } ] } }, { "isoform_ac": "F1S418-1", "url": "https://www.uniprot.org/uniprotkb/F1S418/entry", "sequence": { "sequence": "MAAAAAAAAGRLLRASVIRHVSAVPWGISASAALRPAPSRRTCLTSVLWSGSSQAKFAFSTSSSHHSPAVTQHAPYFKGTAVVNGEFKELSLDDYKGKYLVLFFYPLDFTFVCPTEIIAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQFVETHGEVCPANWTPDSPTIKPHPTDSKEYFEKVHQ", "length": 261, "header": "tr|F1S418-1|A0A5G2QKD9_PIG Computationally mapped isoform of Thioredoxin-dependent peroxide reductase, mitochondrial OS=Sus scrofa OX=9823 GN=PRDX3 PE=1 SV=1 CANONICAL=A0A5G2QKD9-1" }, "locus": { "chromosome": "14", "start_pos": 129090777, "end_pos": 129079823, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011683.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011683.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011381.2", "url": "https://www.ensembl.org/id/ENSSSCP00000011381.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S418", "url": "https://www.uniprot.org/uniprotkb/F1S418" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100154143", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154143", "resource": "KEGG Pathway" }, { "id": "R-SSC-3299685", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3299685", "resource": "Reactome", "description": "Detoxification of Reactive Oxygen Species" } ], "orthologs": [ { "uniprot_canonical_ac": "G3H7R4-1", "protein_name": "Thioredoxin-dependent peroxide reductase, mitochondrial", "gene_name": "Prdx3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAAAAGRLLWSSVAQHVSAISRGISASAVLRPVASRRTCLTDILWSASAQGKFAFSTSSSFHTPAVTQHAPYFKGTAVVNGEFKELSLEDFKGKYLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNITLLSDLTKQISRDYGVLLEGAGIALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQFVETHGEVCPANWTPESPTIKPSPTASKEYFEKVHQ", "length": 257 }, "evidence": [ { "id": "A0A5G2QKD9", "url": "https://omabrowser.org/oma/group/A0A5G2QKD9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P20108-1", "protein_name": "Thioredoxin-dependent peroxide reductase, mitochondrial", "gene_name": "Prdx3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAAGRLLWSSVARHASAISRSISASTVLRPVASRRTCLTDILWSASAQGKSAFSTSSSFHTPAVTQHAPYFKGTAVVNGEFKELSLDDFKGKYLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNITLLSDITKQISRDYGVLLESAGIALRGLFIIDPNGVVKHLSVNDLPVGRSVEETLRLVKAFQFVETHGEVCPANWTPESPTIKPSPTASKEYFEKVHQ", "length": 257 }, "evidence": [ { "id": "A0A5G2QKD9", "url": "https://omabrowser.org/oma/group/A0A5G2QKD9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P30048-1", "protein_name": "Thioredoxin-dependent peroxide reductase, mitochondrial", "gene_name": "PRDX3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAAVGRLLRASVARHVSAIPWGISATAALRPAACGRTSLTNLLCSGSSQAKLFSTSSSCHAPAVTQHAPYFKGTAVVNGEFKDLSLDDFKGKYLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGSGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQYVETHGEVCPANWTPDSPTIKPSPAASKEYFQKVNQ", "length": 256 }, "evidence": [ { "id": "A0A5G2QKD9", "url": "https://omabrowser.org/oma/group/A0A5G2QKD9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P35705-1", "protein_name": "Thioredoxin-dependent peroxide reductase, mitochondrial", "gene_name": "PRDX3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAATAGRLFRASLIRHVSAIPWGISASAALRPAASRRMCLTNALWSGSDQAKFAFSTSSSYHAPAVTQHAPYFKGTAVVSGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQFVEAHGEVCPANWTPESPTIKPHPTASREYFEKVNQ", "length": 257 }, "evidence": [ { "id": "A0A5G2QKD9", "url": "https://omabrowser.org/oma/group/A0A5G2QKD9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9C5R8-1", "protein_name": "2-Cys peroxiredoxin BAS1-like, chloroplastic", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSMASIASSSSTTLLSSSRVLLPSKSSLLSPTVSFPRIIPSSSASSSSLCSGFSSLGSLTTNRSASRRNFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRYEEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDITKSISKSFGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKLSKEYFSAI", "length": 273 }, "evidence": [ { "id": "A0A5G2QKD9", "url": "https://omabrowser.org/oma/group/A0A5G2QKD9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9Z0V6-1", "protein_name": "Thioredoxin-dependent peroxide reductase, mitochondrial", "gene_name": "Prdx3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAAAGRLLWSSVARPASTIFRSISASTVLRPVASRRTCLTDMLWSACPQAKFAFSTSSSFHTPAVTQHAPHFKGTAVVNGEFKELSLDDFKGKYLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNITLLSDLTKQISRDYGVLLESAGIALRGLFIIDPNGVIKHLSVNDLPVGRSVEEPLRLVKAFQFVETHGEVCPANWTPESPTIKPSPTASKEYFEKVHQ", "length": 257 }, "evidence": [ { "id": "A0A5G2QKD9", "url": "https://omabrowser.org/oma/group/A0A5G2QKD9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "thioredoxin-dependent peroxiredoxin activity", "id": "GO:0140824", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140824", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9" } ], "pmid": "" }, { "name": "protein kinase binding", "id": "GO:0019901", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019901", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9" } ], "pmid": "" }, { "name": "cysteine-type endopeptidase inhibitor activity involved in apoptotic process", "id": "GO:0043027", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043027", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9" } ], "pmid": "" }, { "name": "thioredoxin peroxidase activity", "id": "GO:0008379", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008379", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9" } ], "pmid": "" }, { "name": "early endosome", "id": "GO:0005769", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005769", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9" } ], "pmid": "" }, { "name": "protein-containing complex", "id": "GO:0032991", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032991", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 10, "go_terms": [ { "name": "response to oxidative stress", "id": "GO:0006979", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006979", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9" } ], "pmid": "" }, { "name": "positive regulation of cell population proliferation", "id": "GO:0008284", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008284", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9" } ], "pmid": "" }, { "name": "negative regulation of apoptotic process", "id": "GO:0043066", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043066", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9" } ], "pmid": "" }, { "name": "regulation of mitochondrial membrane potential", "id": "GO:0051881", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051881", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9" } ], "pmid": "" }, { "name": "response to hydrogen peroxide", "id": "GO:0042542", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042542", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9" } ], "pmid": "" }, { "name": "positive regulation of canonical NF-kappaB signal transduction", "id": "GO:0043123", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043123", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9" } ], "pmid": "" }, { "name": "cell redox homeostasis", "id": "GO:0045454", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045454", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9" } ], "pmid": "" }, { "name": "mitochondrion organization", "id": "GO:0007005", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007005", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9" } ], "pmid": "" }, { "name": "hydrogen peroxide catabolic process", "id": "GO:0042744", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042744", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9" } ], "pmid": "" }, { "name": "cellular response to reactive oxygen species", "id": "GO:0034614", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034614", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKD9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 236, "end_pos": 238, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "62620", "name": "", "equation": "a hydroperoxide + [thioredoxin]-dithiol = an alcohol + [thioredoxin]-disulfide + H2O", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "62620", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/62620" } ] }, { "id": "R-SSC-3322995", "name": "PRDX3,5 catalyze TXN2 reduced + H2O2 => TXN2 oxidized + 2H2O", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [ "R-ALL-1614617", "R-SSC-3323048" ], "output_participant_list": [ "R-SSC-3323059" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-3322995", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3322995" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-1614617", "participant_name": "H2O2 [mitochondrial matrix]", "crossref": [ { "id": "16240", "database": "ChEBI", "url": "" }, { "id": "C00027", "database": "COMPOUND", "url": "" }, { "id": "11533079", "database": "PubChem Substance", "url": "" }, { "id": "HMDB0003125", "database": "HMDB Metabolite", "url": "" } ] }, { "participant_id": "R-SSC-3323048", "participant_name": "TXN2 [mitochondrial matrix]", "crossref": [ { "id": "A0A287A349", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000000144", "database": "ENSEMBL", "url": "" }, { "id": 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"A0A5G2QGL7-1", "uniprot_ac": "A0A5G2QGL7", "uniprot_id": "A0A5G2QGL7_PIG", "mass": { "chemical_mass": 34963.0, "monoisotopic_mass": 34963.0 }, "refseq": {}, "gene_names": [ { "name": "UOX", "type": "recommended", "evidence": [ { "id": "A0A5G2QGL7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7" } ] } ], "protein_names": [ { "name": "Uricase", "type": "recommended", "evidence": [ { "id": "A0A5G2QGL7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7/entry#names_and_taxonomy" } ] }, { "name": "1.7.3.3", "type": "synonym", "evidence": [ { "id": "A0A5G2QGL7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7/entry#names_and_taxonomy" } ] }, { "name": "Urate oxidase", "type": "synonym", "evidence": [ { "id": "A0A5G2QGL7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.", "evidence": [ { "database": "UniProtKB", "id": "I3LL15", "url": "https://www.uniprot.org/uniprotkb/I3LL15#function" }, { "database": "UniProtKB", "id": "PIRNR000241", "url": "https://www.uniprot.org/uniprotkb/PIRNR000241#function" }, { "database": "UniProtKB", "id": "ARBA00003860", "url": "https://www.uniprot.org/uniprotkb/ARBA00003860#function" }, { "database": "UniProtKB", "id": "RU004455", "url": "https://www.uniprot.org/uniprotkb/RU004455#function" }, { "database": "UniProtKB", "id": "A0A5G2QGL7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGL7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "UOX", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7", "locus": { "chromosome": "6", "start_pos": 129375724, "end_pos": 129343592, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000022206", "url": "https://www.ensembl.org/id/ENSSSCG00000022206" } ] } } ], "crossref": [ { "id": "A0A5G2QGL7", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QGL7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000022206", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000022206", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00445", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00445", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR002042", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002042", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019842", "url": 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"Protein" ] }, { "id": "A0A5G2QGL7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LL15", "url": "https://www.uniprot.org/uniprotkb/I3LL15", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LL15-1", "url": "https://www.uniprot.org/uniprotkb/I3LL15-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "AYHYQESHLFNDEVEFVRTGYGKDMIKVLHIQRDGKYHSIKEVATSVQLTLSSKKDYLHGDNSDVIPTDTIKNTVNVLAKFNGIKSIETFAVTICEHFLSSFKHVIRAQVYVEEVPWKRFEKNGVKHVHAFIYTPTGTHFCEVEQIRNGPPVIHSGIKDLKVLKTTQSGFEGFIKDQFTTLPEVKDRCFATQVYCKWRYHQGRDVDFEATWDTVRSIVLQKFAGPYDKGEYSPSVQKTLYDIQVLTLGQVPEIEDMEISLPNIHYLNIDMSKMGLINKEEVLLPLDNPYGRITGTVKRKLTSRL", "length": 304, "header": "tr|A0A5G2QGL7-1|A0A5G2QGL7_PIG Isoform 1 of Uricase OS=Sus scrofa OX=9823 GN=UOX PE=3 SV=1 CANONICAL=A0A5G2QGL7-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QGL7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7/entry", "sequence": { "sequence": "AYHYQESHLFNDEVEFVRTGYGKDMIKVLHIQRDGKYHSIKEVATSVQLTLSSKKDYLHGDNSDVIPTDTIKNTVNVLAKFNGIKSIETFAVTICEHFLSSFKHVIRAQVYVEEVPWKRFEKNGVKHVHAFIYTPTGTHFCEVEQIRNGPPVIHSGIKDLKVLKTTQSGFEGFIKDQFTTLPEVKDRCFATQVYCKWRYHQGRDVDFEATWDTVRSIVLQKFAGPYDKGEYSPSVQKTLYDIQVLTLGQVPEIEDMEISLPNIHYLNIDMSKMGLINKEEVLLPLDNPYGRITGTVKRKLTSRL", "length": 304, "header": "tr|A0A5G2QGL7-1|A0A5G2QGL7_PIG Isoform 1 of Uricase OS=Sus scrofa OX=9823 GN=UOX PE=3 SV=1 CANONICAL=A0A5G2QGL7-1" }, "locus": { "chromosome": "6", "start_pos": 129374819, "end_pos": 129353341, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089288.1", "url": "https://www.ensembl.org/id/ENSSSCT00000089288.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063912.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063912.1" } ] } }, { "isoform_ac": "I3LL15-1", "url": "https://www.uniprot.org/uniprotkb/I3LL15/entry", "sequence": { "sequence": "MAHYRNDYKKNDEVEFVRTGYGKDMIKVLHIQRDGKYHSIKEVATSVQLTLSSKKDYLHGDNSDVIPTDTIKNTVNVLAKFNGIKSIETFAVTICEHFLSSFKHVIRAQVYVEEVPWKRFEKNGVKHVHAFIYTPTGTHFCEVEQIRNGPPVIHSGIKDLKVLKTTQSGFEGFIKDQFTTLPEVKDRCFATQVYCKWRYHQGRDVDFEATWDTVRSIVLQKFAGPYDKGEYSPSVQKTLYDIQVLTLGQVPEIEDMEISLPNIHYLNIDMSKMGLINKEEVLLPLDNPYGRITGTVKRKLTSRL", "length": 304, "header": "tr|I3LL15-1|A0A5G2QGL7_PIG Computationally mapped isoform of Uricase OS=Sus scrofa OX=9823 GN=UOX PE=3 SV=2 CANONICAL=A0A5G2QGL7-1" }, "locus": { "chromosome": "6", "start_pos": 129374819, "end_pos": 129343642, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024132.3", "url": "https://www.ensembl.org/id/ENSSSCT00000024132.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024781.2", "url": "https://www.ensembl.org/id/ENSSSCP00000024781.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LL15", "url": "https://www.uniprot.org/uniprotkb/I3LL15" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1NMP3-1", "protein_name": "Uricase", "gene_name": "UOX", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "CFYYHWLNDEVEFVRTGYGKDMVKVLHIQRDGKYHSIKEVATSVQLTLNSRREYLHGDNSDIIPTDTIKNTVQVLAKFKGIKSIETFAMNICEHFLSSFNHVIRVQVYVEEVPWKRFEKNGVKHVHAFIHTPTGTHFCEVEQLRSGPPVIHSGIKDLKVLKTTQSGFEGFLKDQFTTLPEVKDRCFATQVYCKWRYHQGRDVDFEATWEAVRGIVLKKFAGPYDKGEYSPSVQKTLYDIQVLSLSQLPEIEDMEISLPNIHYFNIDMSKMGLINKEEVLLPLDNPYGRITGTVKRKLTSRL", "length": 301 }, "evidence": [ { "id": "A0A5G2QGL7", "url": "https://omabrowser.org/oma/group/A0A5G2QGL7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8V0Z8J2-1", "protein_name": "Uricase", "gene_name": "LOC101747367", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MIRPPRNVLNSVIAATHKDIFPKHFSFYQDLEIFSLSQIKDIEVLNCEYGKNTIKFLRLHREGKKHFVKEVEVCTHLRLTSAHEYLDGNNSFVIPTDTIKNIVLVLAKKNGISSIEQFAIDICKHFMTTFCQVAYVKTYIQEVPWQRQYQNGVPHIHSFILVPDGIRFCEAEQCRNGPLVVCAGIKDLKLMKTTQSGFEGFYRNEHTTLPERNDRILCGEFFCKWSYGECRDFDFDCIWSKVRECILEAFSGPPDCGEYSPSYQRTVNCIQMCVLSRVPQVQVIEVILNNNFYNVVDMKALGCTNDKEVLVPVETPYGSCACTLGRKKYLEAQSHMIKDEKQSQFGLVAAQGK", "length": 353 }, "evidence": [ { "id": "A0A5G2QGL7", "url": "https://omabrowser.org/oma/group/A0A5G2QGL7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "O04420-1", "protein_name": "Uricase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAQEADGIRLDQRHGKARVRVGRVWRHAHDGSHHFVEWNVSISLLSHCLSSYRLDDNSDIVATDTIKNTVYVKAKECGDRLSVEEFAILIGKHFCSFYPQVFTAIVNIIEKPWERVSIDGKPHLHGFKLGSENHTTEARVEKSGALNLTSGIGGLALLKTTQSGFERFVRDKYTILPETRERMLATEVNASWRYSYESVASIPTKGLYFSEKFMDVKKVLMDTFFGPPETGVYSPSVQRTLYLMGSAVLKRFADVSSIHLKMPNIHFLPVNLSTKENPSMVKFKDDVYLPTDEPHGSIEATLSRITSKL", "length": 309 }, "evidence": [ { "id": "A0A5G2QGL7", "url": "https://omabrowser.org/oma/group/A0A5G2QGL7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P09118-1", "protein_name": "Uricase", "gene_name": "Uox", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAHYHDDYGKNDEVEFVRTGYGKDMVKVLHIQRDGKYHSIKEVATSVQLTLRSKKDYLHGDNSDIIPTDTIKNTVHVLAKFKGIKSIETFAMNICEHFLSSFSHVTRAHVYVEEVPWKRFEKNGVKHVHAFIHTPTGTHFCDVEQVRNGPPIIHSGIKDLKVLKTTQSGFEGFIKDQFTTLPEVKDRCFATQVYCKWRYQNRDVDFEATWGAVRDIVLKKFAGPYDRGEYSPSVQKTLYDIQVLTLSQLPEIEDMEISLPNIHYFNIDMSKMGLINKEEVLLPLDNPYGKITGTVRRKLPSRL", "length": 303 }, "evidence": [ { "id": "A0A5G2QGL7", "url": "https://omabrowser.org/oma/group/A0A5G2QGL7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P16163-1", "protein_name": "Uricase", "gene_name": "Uro", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MFATPLRQPAAANHQTPKNSAGMDEHGKPYQYEITDHGYGKDAVKVLHVSRNGPVHAIQEFEVGTHLKLYSKKDYYQGNNSDIVATDSQKNTVYLLAKKHGIESPEKFALLLARHFINKYSHVEEAHVHVEAYPWQRVCQEETRTNVNGKCENGVQGNCDFSSIDNRSLHNHAFIFTPTALHYCDVVIRRTDPKQTVITGIKGLRVLKTTQSSFVNFVNDEFRSLPDQYDRIFSTVVDCSWEYSDTENLDFLRAWQTVKNIIIRNFAGDPQVGVSSPSVQHTLYLSERQVLDVLPQVSVISMTMPNKHYFNFDTKPFQKIAPGDNNEVFIPVDKPHGTIYAQLARKNINSHL", "length": 352 }, "evidence": [ { "id": "A0A5G2QGL7", "url": "https://omabrowser.org/oma/group/A0A5G2QGL7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "P25688-1", "protein_name": "Uricase", "gene_name": "Uox", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAHYHDNYGKNDEVEFVRTGYGKDMVKVLHIQRDGKYHSIKEVATSVQLTLRSKKDYLHGDNSDIIPTDTIKNTVHVLAKLRGIRNIETFAMNICEHFLSSFNHVTRAHVYVEEVPWKRFEKNGIKHVHAFIHTPTGTHFCEVEQMRNGPPVIHSGIKDLKVLKTTQSGFEGFLKDQFTTLPEVKDRCFATQVYCKWRYQRRDVDFEAIWGAVRDIVLQKFAGPYDKGEYSPSVQKTLYDIQVLSLSQLPEIEDMEISLPNIHYFNIDMSKMGLINKEEVLLPLDNPYGKITGTVKRKLPSRL", "length": 303 }, "evidence": [ { "id": "A0A5G2QGL7", "url": "https://omabrowser.org/oma/group/A0A5G2QGL7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q54LT2-1", "protein_name": "Uricase", "gene_name": "uox", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MATLIDNRYGKARVRVLRVFKGPNEYHKVFDFDCRVLLRGAEFSETYLTGDNSKVVATDTMKNTVYVIAQKEEFKSLEEYGILLGKHFLATYSWVNGVEVVMRENQWRRIKTSNGKEQAHSFQRDREIHSVTVTSSRDKSPVVVSGIDDLLIMKTTQSGFEGFHRDKYTSLKETKDRVFATVVTANWTYNTLSVDYSKVFEQFKLSVFDIFAQTYSRSVQETLFLIAKDVISKVPQVEQVHLSLPNKHAFGFDFSRLNIENNQTVFQPVEEPSGLIEGTIKRSHSRL", "length": 287 }, "evidence": [ { "id": "A0A5G2QGL7", "url": "https://omabrowser.org/oma/group/A0A5G2QGL7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 15, "go_terms": [ { "name": "urate catabolic process", "id": "GO:0019628", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019628", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGL7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7" } ], "pmid": "" }, { "name": "adenosine catabolic process", "id": "GO:0006154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006154", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGL7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7" } ], "pmid": "" }, { "name": "deoxyadenosine catabolic process", "id": "GO:0006157", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006157", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGL7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7" } ], "pmid": "" }, { "name": "AMP catabolic process", "id": "GO:0006196", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006196", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGL7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7" } ], "pmid": "" }, { "name": "xanthine catabolic process", "id": "GO:0009115", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009115", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGL7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7" } ], "pmid": "" }, { "name": "guanine catabolic process", "id": "GO:0006147", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006147", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGL7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7" } ], "pmid": "" }, { "name": "inosine catabolic process", "id": "GO:0006148", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006148", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGL7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7" } ], "pmid": "" }, { "name": "deoxyinosine catabolic process", "id": "GO:0006149", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006149", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGL7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7" } ], "pmid": "" }, { "name": "deoxyguanosine catabolic process", "id": "GO:0006161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006161", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGL7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7" } ], "pmid": "" }, { "name": "GMP catabolic process", "id": "GO:0046038", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046038", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGL7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7" } ], "pmid": "" }, { "name": "dAMP catabolic process", "id": "GO:0046059", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046059", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGL7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7" } ], "pmid": "" }, { "name": "hypoxanthine catabolic process", "id": "GO:0009114", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009114", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGL7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7" } ], "pmid": "" }, { "name": "IMP catabolic process", "id": "GO:0006204", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006204", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGL7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7" } ], "pmid": "" }, { "name": "dGMP catabolic process", "id": "GO:0046055", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046055", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGL7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7" } ], "pmid": "" }, { "name": "purine nucleobase catabolic process", "id": "GO:0006145", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006145", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGL7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "peroxisome", "id": "GO:0005777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005777", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGL7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "urate oxidase activity", "id": "GO:0004846", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004846", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGL7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "21368", "name": "", "equation": "urate + O2 + H2O = 5-hydroxyisourate + H2O2", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "21368", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/21368" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QGL7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 304, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QGL7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QGL7" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", 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"title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QIY7-1", "uniprot_ac": "A0A5G2QIY7", "uniprot_id": "A0A5G2QIY7_PIG", "mass": { "chemical_mass": 123585.0, "monoisotopic_mass": 123585.0 }, "refseq": {}, "gene_names": [ { "name": "ADCY2", "type": "recommended", "evidence": [ { "id": "A0A5G2QIY7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIY7" } ] } ], "protein_names": [ { "name": "Adenylate cyclase type 2", "type": "recommended", "evidence": [ { "id": "A0A5G2QIY7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIY7/entry#names_and_taxonomy" } ] }, { "name": "4.6.1.1", "type": "synonym", "evidence": [ { "id": "A0A5G2QIY7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIY7/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. Down-stream signaling cascades mediate changes in gene expression patterns and lead to increased IL6 production. Functions in signaling cascades downstream of the muscarinic acetylcholine receptors.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIY7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIY7#function" }, { "database": "UniProtKB", "id": "ARBA00057708", "url": "https://www.uniprot.org/uniprotkb/ARBA00057708#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIY7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIY7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ADCY2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIY7", "locus": { "chromosome": "16", "start_pos": 74306418, "end_pos": 74729974, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000017101", "url": "https://www.ensembl.org/id/ENSSSCG00000017101" } ] } } ], "crossref": [ { "id": "A0A5G2QIY7", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QIY7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000017101", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000017101", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07302", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07302", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001054", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001054", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009398", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009398", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018297", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018297", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029787", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029787", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR030672", "url": "https://www.ebi.ac.uk/interpro/entry/IPR030672", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032628", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032628", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR45627", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45627", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45627:SF6", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45627:SF6", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00211", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00211", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF06327", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06327", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16214", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16214", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "15389", "url": "https://www.rhea-db.org/rhea/15389", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QIY7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIY7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QIY7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIY7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MWQEAMRRRRYLRDRAEAAAAAAAGGGGGDGLQRSRDWLYESYYCMSQQHPLIVFLLLIVMGACVALLAVFFALRLDVEDHVAFLITVPTALAIFFAIFILVCIESVFKKLLRLFSLVIWICLVAMGYLFMCFGGTVSPWDQVSFFLFIIFVVYTMLPFNMRDAIIASVLTSSSHTIVLSVCLSATPGAKEHLVWQILANVIIFICGNLAGAYHKHLMELALQQTYQDTCNCIKSRIKLEFEKRQQERLLLSLLPAHIAMEMKAEIIQRLQGPKAGQMENTNNFHNLYVKRHTNVSILYADIVGFTRLASDCSPGELVHMLNELFGKFDQIAKENECMRIKILGDCYYCVSGLPISLPNHAKNCVMGLDMCEAIKKVRDATGVDINMRVGVHSGNVLCGVIGLQKWQYDVWSHDVTLANHMEAGGVPGRVHISSVTLEHLNGAYKVEDGDGDIRDPYLKQHLVKTYFVINPKGERRSPHLFRPRHTLDGAKMRASVRMTRYLESWGAAKPFAHLHHRDSMTTENGKISTTDVPMGQHSFQNRTLRTKSQKKRFEEELNERMIQAIDGINAQKQWLKSEDIQRISLLFYNKILEKEYRATALPAFKYYVTCACLIFFCIFIVQILVLPKTSILGISFGAAFLSLAFILFVCFAGQLLQCSKKASASLLWLLKSSGIIANRPWPRISLTVVTTAIILTMAVVNMFFLSESEETIPPTANTSNMSLSALNNQAAILRAQNLFFLPYFIYSCILGLISCSVFLRINYELKMLIMMAALVGYNTIFLHTHAHLLDDYSQVLFERPGIWKDLKTMGSVSLFIFFVTLLVLGRQNEYYCRLDFLWKNKFKKEREEIETMENLNRVLLENVLPAHVAEHFLARSLKNEELYHQSYECVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGEKIKTIGSTYMAATGLSAVPSQEHAQEPDRQYMHIGTMVEFAFALVAKLDAINKHSFNDFKLRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTLGYTCTCRGIINVKGKGDLKTYFVNAEMSRSLSQSNLAS", "length": 1094, "header": "tr|A0A5G2QIY7-1|A0A5G2QIY7_PIG Isoform 1 of Adenylate cyclase type 2 OS=Sus scrofa OX=9823 GN=ADCY2 PE=1 SV=2 CANONICAL=A0A5G2QIY7-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QIY7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIY7/entry", "sequence": { "sequence": 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"length": 1094, "header": "tr|A0A5G2QIY7-1|A0A5G2QIY7_PIG Isoform 1 of Adenylate cyclase type 2 OS=Sus scrofa OX=9823 GN=ADCY2 PE=1 SV=2 CANONICAL=A0A5G2QIY7-1" }, "locus": { "chromosome": "16", "start_pos": 74729974, "end_pos": 74307484, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088849.3", "url": "https://www.ensembl.org/id/ENSSSCT00000088849.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064761.2", "url": "https://www.ensembl.org/id/ENSSSCP00000064761.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 186, "start_aa": "Thr", "end_pos": 186, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr186", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIY7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIY7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "adenylate cyclase activity", "id": "GO:0004016", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004016", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIY7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIY7" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIY7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIY7" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIY7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIY7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIY7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIY7" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIY7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIY7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "cAMP biosynthetic process", "id": "GO:0006171", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006171", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIY7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIY7" } ], "pmid": "" }, { "name": "intracellular signal transduction", "id": "GO:0035556", "url": 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"id": "F1SGC2-1", "url": "https://www.uniprot.org/uniprotkb/F1SGC2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSEFLAELHWEDGFAIPVANEENKILEDQLSKLQNERSSLQDQLRDYEDRINAMTSHFKNVKQEFLFTQSLCKAREHEIESEEHFKMIAERELGRVKDEIQRLENETASIQEKKSDKENYIFKTIQKLDGLKCQMNWDQQALEAWLEESARKDSDAFTLQKYAQQDDNKIRALTLQLERLTVECNQRRKVLDNELAETLSAQLELDKAAQDFRKIHSERQELIKQWENTIEQMQQRDRDIDNCALLDSLKATVNRSSSDLEALRKNISKIKKDINEETTRLHKIKNHNQIVRKKLKQITEKTMSVEEKATNLEDMLKEEERGVKEVEVQLNILKDVLFKKVRELQTETMKEKAIVSEIEGTRSSLKHLNHQLHKLDFETLKQQEIMYSQDFYIQQVERRMSRLKGEINSEERQALEAKTVELKKTLEEKKSTLSLLEVQIKKLHNDLYFIKKSNSKNCDEKQSLMTKINELNLFNDRSEKELNKVKALKQDLMIEDNLLKLEVKRAREMLHSKAKEVLSLEKRKQQLHTAMEERTEEIKVHKTMLASQIRYVDQERQNVSAEFHERLSKIDKLKNRYEILTVVMLPPEGEEEKTQAYYVIKAAQEKEELQREGDSLDAKINKAEKEIYALGNTLQVLNSCNNNYKQSFKKVTPSSDEYELKIQLEEQKRAVDEKYRYKQRQIRELQEDIQSMENTLAVIEHVTNNVKEKMSEKQAYALQLSRETEEQKPKLERVTKQCAKLTKEIRLLKDTKDVTLEEHDIKLREVKRLHKIIDEMLADIAEENAEIGTILQTYFQQSGLELPTASTKGSHHSSRSPSQTSLLSSARSSKSTSTSTSQTSIKVLELNFPASPLIGSTSRPASVSSGSSNGKSKKSNK", "length": 878, "header": "tr|A0A5G2QJI8-1|A0A5G2QJI8_PIG Isoform 1 of Coiled-coil domain-containing protein 39 OS=Sus scrofa OX=9823 GN=CCDC39 PE=3 SV=1 CANONICAL=A0A5G2QJI8-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QJI8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJI8/entry", "sequence": { "sequence": "MSSEFLAELHWEDGFAIPVANEENKILEDQLSKLQNERSSLQDQLRDYEDRINAMTSHFKNVKQEFLFTQSLCKAREHEIESEEHFKMIAERELGRVKDEIQRLENETASIQEKKSDKENYIFKTIQKLDGLKCQMNWDQQALEAWLEESARKDSDAFTLQKYAQQDDNKIRALTLQLERLTVECNQRRKVLDNELAETLSAQLELDKAAQDFRKIHSERQELIKQWENTIEQMQQRDRDIDNCALLDSLKATVNRSSSDLEALRKNISKIKKDINEETTRLHKIKNHNQIVRKKLKQITEKTMSVEEKATNLEDMLKEEERGVKEVEVQLNILKDVLFKKVRELQTETMKEKAIVSEIEGTRSSLKHLNHQLHKLDFETLKQQEIMYSQDFYIQQVERRMSRLKGEINSEERQALEAKTVELKKTLEEKKSTLSLLEVQIKKLHNDLYFIKKSNSKNCDEKQSLMTKINELNLFNDRSEKELNKVKALKQDLMIEDNLLKLEVKRAREMLHSKAKEVLSLEKRKQQLHTAMEERTEEIKVHKTMLASQIRYVDQERQNVSAEFHERLSKIDKLKNRYEILTVVMLPPEGEEEKTQAYYVIKAAQEKEELQREGDSLDAKINKAEKEIYALGNTLQVLNSCNNNYKQSFKKVTPSSDEYELKIQLEEQKRAVDEKYRYKQRQIRELQEDIQSMENTLAVIEHVTNNVKEKMSEKQAYALQLSRETEEQKPKLERVTKQCAKLTKEIRLLKDTKDVTLEEHDIKLREVKRLHKIIDEMLADIAEENAEIGTILQTYFQQSGLELPTASTKGSHHSSRSPSQTSLLSSARSSKSTSTSTSQTSIKVLELNFPASPLIGSTSRPASVSSGSSNGKSKKSNK", "length": 878, "header": "tr|A0A5G2QJI8-1|A0A5G2QJI8_PIG Isoform 1 of Coiled-coil domain-containing protein 39 OS=Sus scrofa OX=9823 GN=CCDC39 PE=3 SV=1 CANONICAL=A0A5G2QJI8-1" }, "locus": { "chromosome": "13", "start_pos": 118682133, "end_pos": 118627350, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070203.2", "url": "https://www.ensembl.org/id/ENSSSCT00000070203.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064966.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064966.1" } ] } }, { "isoform_ac": "F1SGC2-1", "url": "https://www.uniprot.org/uniprotkb/F1SGC2/entry", "sequence": { "sequence": "MSSEFLAELHWEDGFAIPVANEENKILEDQLSKLQNERSSLQDQLRDYEDRINAMTSHFKNVKQEFLFTQSLCKAREHEIESEEHFKMIAERELGRVKDEIQRLENETASIQEKKSDKENYIFKTIQKLDGLKCQMNWDQQALEAWLEESARKDSDAFTLQKYAQQDDNKIRALTLQLERLTVECNQRRKVLDNELAETLSAQLELDKAAQDFRKIHSERQELIKQWENTIEQMQQRDRDIDNCALALARIKQEIREKENLVKEKIKFLESEIGNNTEYEKKISVADRKVLKCRTEYQRHETNRSQLKDELDSLKATVNRSSSDLEALRKNISKIKKDINEETTRLHKIKNHNQIVRKKLKQITEKTMSVEEKATNLEDMLKEEERGVKEVEVQLNILKDVLFKKVRELQTETMKEKAIVSEIEGTRSSLKHLNHQLHKLDFETLKQQEIMYSQDFYIQQVERRMSRLKGEINSEERQALEAKTVELKKTLEEKKSTLSLLEVQIKKLHNDLYFIKKSNSKNCDEKQSLMTKINELNLFNDRSEKELNKVKALKQDLMIEDNLLKLEVKRAREMLHSKAKEVLSLEKRKQQLHTAMEERTEEIKVHKTMLASQIRYVDQERQNVSAEFHERLSKIDKLKNRYEILTVVMLPPEGEEEKTQAYYVIKAAQEKEELQREGDSLDAKINKAEKEIYALGNTLQVLNSCNNNYKQSFKKVTPSSDEYELKIQLEEQKRAVDEKYRYKQRQIRELQEDIQSMENTLAVIEHVTNNVKEKMSEKQAYALQLSRETEEQKPKLERVTKQCAKLTKEIRLLKDTKDVTLEEHDIKLREVKRLHKIIDEMLADIAEENAEIGTILQTYFQQSGLELPTASTKGSHHSSRSPSQTSLLSSARSSKSTSTSTSQTSIKVLELNFPASPLIGSTSRPASVSSGSSNGKSKKSNK", "length": 942, "header": "tr|F1SGC2-1|A0A5G2QJI8_PIG Computationally mapped isoform of Coiled-coil domain-containing protein 39 OS=Sus scrofa OX=9823 GN=CCDC39 PE=3 SV=2 CANONICAL=A0A5G2QJI8-1" }, "locus": { "chromosome": "13", "start_pos": 118682133, "end_pos": 118627350, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012879.5", "url": "https://www.ensembl.org/id/ENSSSCT00000012879.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012538.3", "url": "https://www.ensembl.org/id/ENSSSCP00000012538.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SGC2", "url": "https://www.uniprot.org/uniprotkb/F1SGC2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100525008", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525008", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A061IPR2-1", "protein_name": "Coiled-coil domain-containing protein 39", "gene_name": "Ccdc39", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSSEFLSELHWEDGFAIPVANQENKMLEDQLSKLQKEKSNLQDQLRDYEDRINSMTSHFKNVNQEFSFTQALYKAREYEIESEEHFKAIAERELGRVKDEIQRLEKEMTAIRERKNDTENAIFKATQKLDGLKCQMNWDQQALEAWLEESAHKDSDTFTLQKYAQQDDNKIRALTLQLERLTVECNEKRKLLDNELTETLSVQLELDKAAQDFRKIHLERQELIQQWESTIEQMKRRDQEIDNFALTLSRIKQETREKEGLVKEKIKFLENEVGNNVEYERRISAAERKVLKFRMEYQRHETSRTQLKDELDTLKATLNRTSSDLEALRKNISKVKKDIHDETSKLQKLKRHNEVVKHKLNMITEKTMSVEEKATNMEDMLKEEEKSVREVEVQLNIVKDVLFKKVQELQNETMKEKALVSEIEGTRCALKHLNHRLHKLDFETLKQQEIMYSQDFYIQQVERRMSRLKGEINSEEKQSLETKIVELKKTLDEKKSTLSLLEAQIKKLHNDLYFLKKSNSKNNDEKQSVMNKINELHLFVDRSEKELNKAITAKQDLMIDDNLLKLEVKRTRELLYSKAEEVLSLEKRKQQLYTTMKERAEEIKVHKAMLASQIKYVDQQRQTVSFEFQERLSKIDKLKNRYEILTVVMLPPEGEEEKTQAYYVIKAAQEKEELQREGDSLDAKINKAEKEIYALQNTLQVLNSCNNNYKQSFKKVTPSSDEYGMKIQLEEQKRSADEKYRCRQRQIRELQEDIQSMENTFEVLEHLANNVKEKLTEKQSYSLQLSKETEEQLPKLERVTKQCGRLKREIRILKETNDETLEEQDIELREIKQYHRDIDQMLVTIMEDTEVNIILQTYFEQNGLELPAVKGQSSRSSSQSSLSSVRSPEVPVTPVVPVTPVSPTSVKVLQQSLPESPTGSNSSRSASNGSNSSTPKGKKPSK", "length": 942 }, "evidence": [ { "id": "A0A5G2QJI8", "url": "https://omabrowser.org/oma/group/A0A5G2QJI8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AAA9TAX0-1", "protein_name": "Coiled-coil domain-containing protein 39", "gene_name": "CCDC39", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSSEFLAELRWEDGFAIPVANEENKTLEEQLSKLQDERSSMQDQLRDYEDRINAMTSHFKNVKQEFLFTQSLCKARDHEIESEEHFKMIAERELGRVKDEIQRLENEITSIREKKNDKENSIFKTTQKLDGLKCQMNWDQQALEAWLEESAHKDSDALTLQKYAQQDDNKIRALTLQLERLTVECNQRRKVLDNEFAETLSVQLELDKAAQDFRKIHNERQKLILQWESTIEQMQKRDKDIDNCAVLDSLKATVNRSSSDLEALRKNISKVKMDINEETARLGKIKNHNQIVRKKLKEITEKTMSVEEKATNLEDMLREEERGVKEVEVQLNIVKDVLFKKVQELQTETMKEKALVSEIEGTRSSLKHLNHQLHKLDFETLQQQEIMYAQDFYIQQVERRMSRLKGDINSEEKQALEAKTVELQKTLEEKKSALCLLETQIKKLHNDLYFTKKSNSKYRDEKQSLMTKINELTLFNDRSEKELTKAKALKQDLMIEDNLLKLEVKRTRELLHSKAEEVLSLEKRKQQLHTAMEERTEEIKVHKTMLASQIRYVDQERQNISAEFHERLSKIDKLKNRYEILTVVMLPPEGEEEKTQAYYVIKAAQEKEELQREGDSLDAKINKAEKEIYALGNTLQVLNSCNNNYKQSFQKVTPSSAEYEVKIQLEEQKRAVDEKYRYKQRQIRELQEDIQSMENTLTVIEHLTNNVKEKVTEKQAYVLQLNRETEEQKPKLERVTKQCAKLTKEVRLLKDTKDETLEEQDIKLREVKQLHKIIDEMIVDITQENAEIGVILQTYFQQSGLELPTTSTKGSRHSSRSPSQTSLLSARSSKSTSTSASQTSIKVLELNFPASPLTGSTSRPTSASSASSTGKSRKTNK", "length": 877 }, "evidence": [ { "id": "A0A5G2QJI8", "url": "https://omabrowser.org/oma/group/A0A5G2QJI8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "D3Z8K2-1", "protein_name": "Coiled-coil domain-containing protein 39", "gene_name": "Ccdc39", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSEFLSELHWEDGFAIPVANQENKILEDQLAKLHKEKSNLQDQLRDYEDRINSMSSHLKNVNQEFLFTQSLYKARECEIESEEHFKAIAERELGRVKDEIQQLEKEMAIILERKNDKENAIFKATQKLDGLKCQMNWDQQALEAWLEESAHKDSDSLTLQKYSQQDNNKIRALTLKLEKLTMECNEKRKLLDNELTETLSAQLELDKAAQDFRKIHVERQELIQQWENTIEQMQRRDQEIDNCALALARIKQEAREKEGVVREKIKFLENEVGNNVEYERRISIAERKVSKCRMEYQRQEANRNQLKDELDTLKTTLNRTSSDLEALRKNISKVKKDILDETGRLQKLKHHNEIVKHKLKMITEKTISIEEKATNMEDMLKEEEKNLKEVEVQLNIVKGVLFKKVQELQSAITKEKALGSEIEGTRSSLKHLNQRLHKLDFETLKQQEIMYSQDFYIQQVERRMSRLKGEINSEEKQALEVKIVELRKTMEERKSTLSLLEEQIKKLHNDLYFIKKSNGKNKDEKESLMNKIGELHLFVDRSEKELNKAKAVKEDLMIEDNLLKLQVKRARELLYSKAEEVLSLEKRKQQLCTAMEERVEEIKVHKAMLTSQIRYVDQQRQTVSSEFHERLSKIDKLKNRYEILTVVMLPPEGEEEKTQSYYVIKAAQEKEELQREGDSLDAKISKAEKEIYALQNTLQVLSSCNNNYKQSFKKVTPSSDEYGIKIQLEEQKRSADEKYRCKQRQIRELQEDIQSMENTFEVIEHLANNAREKLSEKQTLSFQLRKETEEQKPKIQRVTKQCGRLRREIRILRQTNDETLEEQDIQLREIIQFHKDIDQMLVNAMENAEIHVIFQTYFQQNGLELPTAKGPSSRSSSQSSLSSIRSLEDSIPISPPTAKVIELRFPGPPARSDSSRSSSGSNSNIPKGKKLNK", "length": 934 }, "evidence": [ { "id": "A0A5G2QJI8", "url": "https://omabrowser.org/oma/group/A0A5G2QJI8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9D5Y1-1", "protein_name": "Coiled-coil domain-containing protein 39", "gene_name": "Ccdc39", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCSEFLSELHWEDGFAIPVANQENKILEDQLAKLREEKSNLQDQLHDYEERINSMTSHLKNVNQEFLFTQSLYKARESEIESEEHFKAIAERELGRVKNETQLLEKEMAIIRERKSQMENNIFKTTQKLDDLKCQMNWDQQALEAWLEESAHKDSDSLTLQKYSQQDDNKIRALTLQLEKLTMEYNEKRKLLDSELTETLSAQLELDKAAQDFRKIHLERQELIQQWENTIEQMQRRDQEIDNCALALSRIKQEAREKEGVVKEKIKFLENEVENNIEYERKISVAERKVSKCRMDYQRHEGNRSQLKDELDTLKTTLNRTSSDLQALRKNISKVKKDIFDETLRLQKLKHHNEVVKHKLKMITEKTLSIEEKATNMEDMLKEEEKGLKEVEVQLGIVKDVLFKKVQELQNEIAKEKALVSEIEGTRSSLKHLNKQLHKLDFETLKQQEIMYSQDFYIQQVERRMSRLKGEINSEEKQALEAKILELKKTMDEKKSTLSLLESQIKKLHNDLYFIKKSNGKNNDEKESLMNKISELNLFIDRSEKELSKAKAVKEDMMIEDNLLKLQVKRARELLYSKAEEVLSLEKRKQQLGKDMEERAEEIKVHKAMLTSQIRCVEQQRKTMSSEFHERLSKIDKLKNRYEILTVVMLPPEGEEEKTQSYYVIKAAQEKEELQREGDSLDAKINKAEKEIYALQNTLQVLNSCNSNYKQSFKKVTPSSDEYALKIQLEEQKRTADERYRCKQRQIRELQEDIQSMENTFEVIGHLANNAKEKLTEKQTLAFQLRKETEEQKPKLQRITKQCGRLRREIRILKQTDNETLEEQDIQLREIIQFHKDIDQMLVNAMENAEIHAIFKTYFEQNGLELPTARGPSSRSSSQSSSLSSFRSLEDVTLQSPPTAKVIQLRFPEPPPATNDSSRSASSGSNSNIPKEKKLSK", "length": 937 }, "evidence": [ { "id": "A0A5G2QJI8", "url": "https://omabrowser.org/oma/group/A0A5G2QJI8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9UFE4-1", "protein_name": "Coiled-coil domain-containing protein 39", "gene_name": "CCDC39", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSSEFLAELHWEDGFAIPVANEENKLLEDQLSKLKDERASLQDELREYEERINSMTSHFKNVKQELSITQSLCKARERETESEEHFKAIAQRELGRVKDEIQRLENEMASILEKKSDKENGIFKATQKLDGLKCQMNWDQQALEAWLEESAHKDSDALTLQKYAQQDDNKIRALTLQLERLTLECNQKRKILDNELTETISAQLELDKAAQDFRKIHNERQELIKQWENTIEQMQKRDGDIDNCALELARIKQETREKENLVKEKIKFLESEIGNNTEFEKRISVADRKLLKCRTAYQDHETSRIQLKGELDSLKATVNRTSSDLEALRKNISKIKKDIHEETARLQKTKNHNEIIQTKLKEITEKTMSVEEKATNLEDMLKEEEKDVKEVDVQLNLIKGVLFKKAQELQTETMKEKAVLSEIEGTRSSLKHLNHQLQKLDFETLKQQEIMYSQDFHIQQVERRMSRLKGEINSEEKQALEAKIVELRKSLEEKKSTCGLLETQIKKLHNDLYFIKKAHSKNSDEKQSLMTKINELNLFIDRSEKELDKAKGFKQDLMIEDNLLKLEVKRTREMLHSKAEEVLSLEKRKQQLYTAMEERTEEIKVHKTMLASQIRYVDQERENISTEFRERLSKIEKLKNRYEILTVVMLPPEGEEEKTQAYYVIKAAQEKEELQREGDCLDAKINKAEKEIYALENTLQVLNSCNNNYKQSFKKVTPSSDEYELKIQLEEQKRAVDEKYRYKQRQIRELQEDIQSMENTLDVIEHLANNVKEKLSEKQAYSFQLSKETEEQKPKLERVTKQCAKLTKEIRLLKDTKDETMEEQDIKLREMKQFHKVIDEMLVDIIEENTEIRIILQTYFQQSGLELPTASTKGSRQSSRSPSHTSLSARSSRSTSTSTSQSSIKVLELKFPASSSLVGSPSRPSSASSSSSNVKSKKSSK", "length": 941 }, "evidence": [ { "id": "A0A5G2QJI8", "url": "https://omabrowser.org/oma/group/A0A5G2QJI8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "axoneme", "id": "GO:0005930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005930", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJI8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJI8" } ], "pmid": "" }, { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJI8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJI8" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJI8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJI8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 9, "go_terms": [ { "name": "cilium movement", "id": "GO:0003341", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003341", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJI8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJI8" } ], "pmid": "" }, { "name": "inner dynein arm assembly", "id": "GO:0036159", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036159", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJI8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJI8" } ], "pmid": "" }, { "name": "lung development", "id": "GO:0030324", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030324", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJI8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJI8" } ], "pmid": "" }, { "name": "heart looping", "id": "GO:0001947", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001947", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJI8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJI8" } ], "pmid": "" }, { "name": "determination of pancreatic left/right asymmetry", "id": "GO:0035469", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035469", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJI8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJI8" } ], "pmid": "" }, { "name": "cilium-dependent cell motility", "id": "GO:0060285", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060285", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJI8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJI8" } ], "pmid": "" }, { "name": "epithelial cilium movement involved in determination of left/right asymmetry", "id": "GO:0060287", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060287", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJI8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJI8" } ], "pmid": "" }, { "name": "determination of digestive tract left/right asymmetry", "id": "GO:0071907", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071907", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJI8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJI8" } ], "pmid": "" }, { "name": "determination of liver left/right asymmetry", "id": "GO:0071910", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071910", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJI8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJI8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 106, "end_pos": 108, "annotation": "n_glycosylation_sequon" }, { "start_pos": 255, "end_pos": 257, "annotation": "n_glycosylation_sequon" }, { "start_pos": 267, "end_pos": 269, "annotation": "n_glycosylation_sequon" }, { "start_pos": 559, "end_pos": 561, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QJI8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 878, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QJI8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QJI8" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 106, "end_pos": 108 }, { "start_pos": 255, "end_pos": 257 }, { "start_pos": 267, "end_pos": 269 }, { "start_pos": 559, "end_pos": 561 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"mass": { "chemical_mass": 29874.0, "monoisotopic_mass": 29874.0 }, "refseq": {}, "gene_names": [ { "name": "YWHAQ", "type": "recommended", "evidence": [ { "id": "A0A5G2QM17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM17" } ] } ], "protein_names": [ { "name": "Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta", "type": "synonym", "evidence": [ { "id": "A0A5G2QM17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM17/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Adapter protein implicated in the regulation of a large spectrum of both general and specialized signaling pathways. Binds to a large number of partners, usually by recognition of a phosphoserine or phosphothreonine motif. Binding generally results in the modulation of the activity of the binding partner. Negatively regulates the kinase activity of PDPK1.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QZA1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZA1#function" }, { "database": "UniProtKB", "id": "ARBA00025150", "url": "https://www.uniprot.org/uniprotkb/ARBA00025150#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM17", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM17" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "YWHAQ", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM17", "locus": { "chromosome": "3", "start_pos": 126772778, "end_pos": 126738862, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008638", "url": "https://www.ensembl.org/id/ENSSSCG00000008638" } ] } } ], "crossref": [ { "id": "A0A5G2QM17", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QM17", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000008638", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008638", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd10023", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd10023", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100048964", "url": "https://www.ncbi.nlm.nih.gov/gene/100048964", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000308", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000308", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023409", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023409", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023410", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023410", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036815", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036815", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042584", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042584", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100048964", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100048964", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CFLMYYL", "url": "https://omabrowser.org/oma/group/CFLMYYL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QZA1", "url": "https://www.orthodb.org/?gene=A0A5G2QZA1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR18860", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR18860", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00244", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00244", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QM17", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM17", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QM17-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM17-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QZA1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZA1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QZA1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZA1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SA98", "url": "https://www.uniprot.org/uniprotkb/F1SA98", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SA98-1", "url": "https://www.uniprot.org/uniprotkb/F1SA98-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKHNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTVSFSFFQFYFLFRNKTISVLFRLFMYSFLVGIQKY", "length": 258, "header": "tr|A0A5G2QM17-1|A0A5G2QM17_PIG Isoform 1 of Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta OS=Sus scrofa OX=9823 GN=YWHAQ PE=1 SV=2 CANONICAL=A0A5G2QM17-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QM17-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM17/entry", "sequence": { "sequence": "MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKHNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTVSFSFFQFYFLFRNKTISVLFRLFMYSFLVGIQKY", "length": 258, "header": "tr|A0A5G2QM17-1|A0A5G2QM17_PIG Isoform 1 of Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta OS=Sus scrofa OX=9823 GN=YWHAQ PE=1 SV=2 CANONICAL=A0A5G2QM17-1" }, "locus": { "chromosome": "3", "start_pos": 126772253, "end_pos": 126739409, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083637.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083637.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065070.2", "url": "https://www.ensembl.org/id/ENSSSCP00000065070.2" } ] } }, { "isoform_ac": "A0A5G2QZA1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZA1/entry", "sequence": { "sequence": "MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAEN", "length": 245, "header": "tr|A0A5G2QZA1-1|A0A5G2QM17_PIG Computationally mapped isoform of Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta OS=Sus scrofa OX=9823 GN=YWHAQ PE=1 SV=1 CANONICAL=A0A5G2QM17-1" }, "locus": { "chromosome": "3", "start_pos": 126771783, "end_pos": 126739409, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078754.1", "url": "https://www.ensembl.org/id/ENSSSCT00000078754.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063565.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063565.1" } ] } }, { "isoform_ac": "F1SA98-1", "url": "https://www.uniprot.org/uniprotkb/F1SA98/entry", "sequence": { "sequence": "MEKTELIQKAKLAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAEN", "length": 224, "header": "tr|F1SA98-1|A0A5G2QM17_PIG Computationally mapped isoform of Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta OS=Sus scrofa OX=9823 GN=YWHAQ PE=1 SV=4 CANONICAL=A0A5G2QM17-1" }, "locus": { "chromosome": "3", "start_pos": 126771783, "end_pos": 126739409, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000009450.5", "url": "https://www.ensembl.org/id/ENSSSCT00000009450.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000009207.4", "url": "https://www.ensembl.org/id/ENSSSCP00000009207.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QZA1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZA1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100048964", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100048964", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "P27348-1", "protein_name": "14-3-3 protein theta", "gene_name": "YWHAQ", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAEN", "length": 245 }, "evidence": [ { "id": "A0A5G2QM17", "url": "https://omabrowser.org/oma/group/A0A5G2QM17/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P68254-1", "protein_name": "14-3-3 protein theta", "gene_name": "Ywhaq", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAEN", "length": 245 }, "evidence": [ { "id": "A0A5G2QM17", "url": "https://omabrowser.org/oma/group/A0A5G2QM17/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P68255-1", "protein_name": "14-3-3 protein theta", "gene_name": "Ywhaq", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAEN", "length": 245 }, "evidence": [ { "id": "A0A5G2QM17", "url": "https://omabrowser.org/oma/group/A0A5G2QM17/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q3SZI4-1", "protein_name": "14-3-3 protein theta", "gene_name": "YWHAQ", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAEN", "length": 245 }, "evidence": [ { "id": "A0A5G2QM17", "url": "https://omabrowser.org/oma/group/A0A5G2QM17/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5ZMD1-1", "protein_name": "14-3-3 protein theta", "gene_name": "YWHAQ", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MDKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDTSDKKMQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAEN", "length": 245 }, "evidence": [ { "id": "A0A5G2QM17", "url": "https://omabrowser.org/oma/group/A0A5G2QM17/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM17", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM17" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", 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"https://www.ensembl.org/id/ENSSSCP00000070428.1" } ] } }, { "isoform_ac": "A0A8D1L3U6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1L3U6/entry", "sequence": { "sequence": "MSSTRRLFKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKIECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTYNN", "length": 146, "header": "tr|A0A8D1L3U6-1|A0A5G2QHC8_PIG Computationally mapped isoform of Ubiquitin conjugating enzyme E2 V2 OS=Sus scrofa OX=9823 GN=UBE2V2 PE=1 SV=1 CANONICAL=A0A5G2QHC8-1" }, "locus": { "chromosome": "4", "start_pos": 79637767, "end_pos": 79622092, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090655.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090655.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060690.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060690.1" } ] } }, { "isoform_ac": "A0A8W4FGG2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGG2/entry", "sequence": { "sequence": "MSSTRRLFKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTYNN", "length": 104, "header": "tr|A0A8W4FGG2-1|A0A5G2QHC8_PIG Computationally mapped isoform of Ubiquitin conjugating enzyme E2 V2 OS=Sus scrofa OX=9823 GN=UBE2V2 PE=1 SV=1 CANONICAL=A0A5G2QHC8-1" }, "locus": { "chromosome": "4", "start_pos": 79637767, "end_pos": 79622092, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105019.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105019.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077399.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077399.1" } ] } }, { "isoform_ac": "I3L6T2-1", "url": "https://www.uniprot.org/uniprotkb/I3L6T2/entry", "sequence": { "sequence": "MAVSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKIECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTYNN", "length": 145, "header": "tr|I3L6T2-1|A0A5G2QHC8_PIG Computationally mapped isoform of Ubiquitin conjugating enzyme E2 V2 OS=Sus scrofa OX=9823 GN=UBE2V2 PE=1 SV=2 CANONICAL=A0A5G2QHC8-1" }, "locus": { "chromosome": "4", "start_pos": 79652447, "end_pos": 79622092, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026021.4", "url": "https://www.ensembl.org/id/ENSSSCT00000026021.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019734.2", "url": "https://www.ensembl.org/id/ENSSSCP00000019734.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L6T2", "url": "https://www.uniprot.org/uniprotkb/I3L6T2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100627960", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627960", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q15819-1", "protein_name": "Ubiquitin-conjugating enzyme E2 variant 2", "gene_name": "UBE2V2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAVSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTYNN", "length": 145 }, "evidence": [ { "id": "A0A5G2QHC8", "url": "https://omabrowser.org/oma/group/A0A5G2QHC8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q3SZ43-1", "protein_name": "Ubiquitin-conjugating enzyme E2 variant 2", "gene_name": "UBE2V2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAVSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTYNN", "length": 145 }, "evidence": [ { "id": "A0A5G2QHC8", "url": "https://omabrowser.org/oma/group/A0A5G2QHC8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5F3Z3-1", "protein_name": "Ubiquitin-conjugating enzyme E2 variant 2", "gene_name": "UBE2V2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAGSTVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPTVRFVTKINMNGINNSNGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTYNN", "length": 144 }, "evidence": [ { "id": "A0A5G2QHC8", "url": "https://omabrowser.org/oma/group/A0A5G2QHC8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q6PEH5-1", "protein_name": "Ubiquitin-conjugating enzyme E2 variant 2", "gene_name": "ube2v2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAASSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPARTNYENRIYSLKVECGPKYPEVPPTVRFVTKISMNGINNSNGMVDARSIPILAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTYSN", "length": 145 }, "evidence": [ { "id": "A0A5G2QHC8", "url": "https://omabrowser.org/oma/group/A0A5G2QHC8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q7M767-1", "protein_name": "Ubiquitin-conjugating enzyme E2 variant 2", "gene_name": "Ube2v2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAVSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGSKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTYNN", "length": 145 }, "evidence": [ { "id": "A0A5G2QHC8", "url": "https://omabrowser.org/oma/group/A0A5G2QHC8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9D2M8-1", "protein_name": "Ubiquitin-conjugating enzyme E2 variant 2", "gene_name": "Ube2v2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAVSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGSKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVILQELRRLMMSKENMKLPQPPEGQTYNN", "length": 145 }, "evidence": [ { "id": "A0A5G2QHC8", "url": "https://omabrowser.org/oma/group/A0A5G2QHC8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHC8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHC8" } ], "pmid": "" }, { "name": "UBC13-MMS2 complex", "id": "GO:0031372", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031372", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHC8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHC8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "DNA double-strand break processing", "id": "GO:0000729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000729", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHC8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHC8" } ], "pmid": "" }, { "name": "positive regulation of double-strand break repair", "id": "GO:2000781", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000781", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHC8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHC8" } ], "pmid": "" }, { "name": "positive regulation of protein K63-linked ubiquitination", "id": "GO:1902523", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902523", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHC8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHC8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 116, "end_pos": 118, "annotation": "n_glycosylation_sequon" }, { "start_pos": 117, "end_pos": 119, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QHC8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 169, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QHC8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QHC8" } ], "lectin_list": [], 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"tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QIN7-1", "uniprot_ac": "A0A5G2QIN7", "uniprot_id": "A0A5G2QIN7_PIG", "mass": { "chemical_mass": 81129.0, "monoisotopic_mass": 81129.0 }, "refseq": {}, "gene_names": [ { "name": "ADAM7", "type": "recommended", "evidence": [ { "id": "A0A5G2QIN7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIN7" } ] } ], "protein_names": [ { "name": "ADAM metallopeptidase domain 7", "type": "synonym", "evidence": [ { "id": "A0A5G2QIN7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIN7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIN7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIN7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ADAM7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIN7", "locus": { "chromosome": "14", "start_pos": 8554869, "end_pos": 8483329, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000009646", "url": "https://www.ensembl.org/id/ENSSSCG00000009646" } ] } } ], "crossref": [ { "id": "A0A5G2QIN7", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QIN7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000009646", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000009646", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd04269", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04269", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100157954", "url": "https://www.ncbi.nlm.nih.gov/gene/100157954", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001590", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001590", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001762", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001762", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002870", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002870", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006586", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006586", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018358", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018358", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR024079", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024079", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR034027", "url": "https://www.ebi.ac.uk/interpro/entry/IPR034027", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036436", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036436", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100157954", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157954", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287BL44", "url": "https://www.orthodb.org/?gene=A0A287BL44", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11905", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11905", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11905:SF21", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11905:SF21", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00200", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00200", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01421", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01421", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01562", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01562", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08516", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08516", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZIY5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIY5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZIY5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIY5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BL44", "url": "https://www.uniprot.org/uniprotkb/A0A287BL44", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BL44-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BL44-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QIN7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIN7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QIN7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIN7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RM85", "url": "https://www.uniprot.org/uniprotkb/F1RM85", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RM85-1", "url": "https://www.uniprot.org/uniprotkb/F1RM85-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSNSHYLSALFSREFLASNYSETYYSTKGEEVTTHPQIMDHCFYQGSIIHEFDSAASISTCSGLRGFFRVNDQRYLIEPVKYSDEGEHLVFRYNPKVQHAANYSCTELNFTRTAVLKDNTKSMEDSKMESIEKEKHIELFIVADNNVYHRNPNSKVRNRVWGMVNFVNMIYKTLDIHVTLVGLETWTNGDKIEIDSNIETTLKRFSAWQEIILKKKKNFDHVVLLSGKWLYTSAQGTSYPGGMCLPYYSSSVVKDLLPDLNTIASRMAHQLGHSLGMKHDDYPCTCTLGKCVMDSGGSIPALKFSKCSRTQYQQYLKDFKPTCMFDIPFSDKLSDYPYCGNKKLDDGEECDCGPVQECTNPCCDARKCMLKPEFTCAEGECCESCQVKKAGSLCRPAKDECDFPETCTGHSPACPKDQFQVNGFPCKDAKGYCFMGNCPTRDDQCSELFDNEAKDSSDICYKMNKNGNKFGYCKNEEQTLIPCEEKDVKCGKIFCTGGKHASILGEEKVYHLKKPLTQNVTECKTFFLYHKSKDFGLVAPGTKCGEGKVCSNSECVTIEKAYNSTDCPSPCNENAVEDGDLGCQCEGVQASVDWEETLNVTNISILVVVLILVIIGVLSAVLLIRYQKCIKLKQVQRPPSEALGVENKGYTGDEQQTRTEPILPDIHPLHRRTAESLARLPTSFSSPHYITLKPASKEPRGTADPNPSAKVSLKLDIQNGCASLS", "length": 725, "header": "tr|A0A5G2QIN7-1|A0A5G2QIN7_PIG Isoform 1 of ADAM metallopeptidase domain 7 OS=Sus scrofa OX=9823 GN=ADAM7 PE=1 SV=1 CANONICAL=A0A5G2QIN7-1" }, "isoforms": [ { "isoform_ac": "A0A286ZIY5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIY5/entry", "sequence": { "sequence": "MFGSLFFTILLISQIKEKVIFGVKGQELVYPKKLPLIQKRNVWHIHEDDIQEAYEEELLYELSLNRKTLILHLLKSREFLASNYSETYYSTKGEEVTTHPQIMDHCFYQGSIIHEFDSAASISTCSGLRGFFRVNDQRYLIEPVKYSDEGEHLVFRYNPKVQHAANYSCTELNFTRTAVLKDNTKSMEDSKMESIEKEKHIELFIVADNNVYHRNPNSKVRNRVWGMVNFCHMGKWLYTSAQGTSYPGGMCLPYYSSSVVKDLLPDLNTIASRMAHQLGHSLGMKHDDYPCTCTLGKCVMDSGGSIPALKFSKCSRTQYQQYLKDFKPTCMFDIPFSDKLSDYPYCGNKKLDDGEECDCGPVQECTNPCCDARKCMLKPEFTCAEGECCESCQVKKAGSLCRPAKDECDFPETCTGHSPACPKDQFQVNGFPCKDAKGYCFMGNCPTRDDQCSELFDNEAKDSSDICYKMNKNGNKFGYCKNEEQTLIPCEEKDVKCGKIFCTGGKHASILGEEKVYHLKKPLTQNVTECKTFFLYHKSKDFGLVAPGTKCGEGKVCSNSECVTIEKAYNSTDCPSPCNENAVEDGDLGCQCEGVQASVDWEETLNVTNISILVVVLILVIIGVLSAVLLIRYQKCIKLKQVQRPPSEALGVENKGYTGDEQQTRTEPILPDIHPLHRRTAESLARLPTSFSSPHYITLKPASKEPRGTADPNPSAK", "length": 717, "header": "tr|A0A286ZIY5-1|A0A5G2QIN7_PIG Computationally mapped isoform of ADAM metallopeptidase domain 7 OS=Sus scrofa OX=9823 GN=ADAM7 PE=1 SV=2 CANONICAL=A0A5G2QIN7-1" }, "locus": { "chromosome": "14", "start_pos": 8552530, "end_pos": 8483329, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065666.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065666.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031442.3", "url": "https://www.ensembl.org/id/ENSSSCP00000031442.3" } ] } }, { "isoform_ac": "A0A287BL44-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BL44/entry", "sequence": { "sequence": "MDHCFYQGSIIHEFDSAASISTCSGLRGFFRVNDQRYLIEPVKYSDEGEHLVFRYNPKVQHAANYSCTELNFTRTAVLKDNTKSMEDSKMESIEKEKHIELFIVADNNVYHRNPNSKVRNRVWGMVNFVNMIYKTLDIHVTLVGLETWTNGDKIEIDSNIETTLKRFSAWQEIILKKKKNFDHVVLLSGKWLYTSAQGTSYPGGMCLPYYSSSVVKDLLPDLNTIASRMAHQLGHSLGMKHDDYPCTCTLGKCVMDSGGSIPALKFSKCSRTQYQQYLKDFKPTCMFDIPFSDKLSDYPYCGNKKLDDGEECDCGPVQECTNPCCDARKCMLKPEFTCAEGECCESCQVKKAGSLCRPAKDECDFPETCTGHSPACPKDQFQVNGFPCKDAKGYCFMGNCPTRDDQCSELFDNEAKDSSDICYKMNKNGNKFGYCKNEEQTLIPCEEKDVKCGKIFCTGGKHASILGEEKVYHLKKPLTQNVTECKTFFLYHKSKDFGLVAPGTKCGEGKVCSNSECVTIEKAYNSTDCPSPCNENAVEDGDLGCQCEGVQASVDWEETLNVTNISILVVVLILVIIGVLSAVLLIRYQKCIKLKQVQRPPSEALGVENKGYTGDEQQTRTEPILPDIHPLHRRTAESLARLPTSFSSPHYITLKPASKEPRGTADPNPSAKVSLKLDIQNGCASLS", "length": 687, "header": "tr|A0A287BL44-1|A0A287BL44_PIG Computationally mapped isoform of ADAM metallopeptidase domain 7 OS=Sus scrofa OX=9823 GN=ADAM7 PE=1 SV=1 CANONICAL=A0A5G2QIN7-1" }, "locus": { "chromosome": "14", "start_pos": 8553604, "end_pos": 8523532, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046971.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046971.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057331.1", "url": "https://www.ensembl.org/id/ENSSSCP00000057331.1" } ] } }, { "isoform_ac": "A0A5G2QIN7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIN7/entry", "sequence": { "sequence": "MSNSHYLSALFSREFLASNYSETYYSTKGEEVTTHPQIMDHCFYQGSIIHEFDSAASISTCSGLRGFFRVNDQRYLIEPVKYSDEGEHLVFRYNPKVQHAANYSCTELNFTRTAVLKDNTKSMEDSKMESIEKEKHIELFIVADNNVYHRNPNSKVRNRVWGMVNFVNMIYKTLDIHVTLVGLETWTNGDKIEIDSNIETTLKRFSAWQEIILKKKKNFDHVVLLSGKWLYTSAQGTSYPGGMCLPYYSSSVVKDLLPDLNTIASRMAHQLGHSLGMKHDDYPCTCTLGKCVMDSGGSIPALKFSKCSRTQYQQYLKDFKPTCMFDIPFSDKLSDYPYCGNKKLDDGEECDCGPVQECTNPCCDARKCMLKPEFTCAEGECCESCQVKKAGSLCRPAKDECDFPETCTGHSPACPKDQFQVNGFPCKDAKGYCFMGNCPTRDDQCSELFDNEAKDSSDICYKMNKNGNKFGYCKNEEQTLIPCEEKDVKCGKIFCTGGKHASILGEEKVYHLKKPLTQNVTECKTFFLYHKSKDFGLVAPGTKCGEGKVCSNSECVTIEKAYNSTDCPSPCNENAVEDGDLGCQCEGVQASVDWEETLNVTNISILVVVLILVIIGVLSAVLLIRYQKCIKLKQVQRPPSEALGVENKGYTGDEQQTRTEPILPDIHPLHRRTAESLARLPTSFSSPHYITLKPASKEPRGTADPNPSAKVSLKLDIQNGCASLS", "length": 725, "header": "tr|A0A5G2QIN7-1|A0A5G2QIN7_PIG Isoform 1 of ADAM metallopeptidase domain 7 OS=Sus scrofa OX=9823 GN=ADAM7 PE=1 SV=1 CANONICAL=A0A5G2QIN7-1" }, "locus": { "chromosome": "14", "start_pos": 8553604, "end_pos": 8523418, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088459.2", "url": "https://www.ensembl.org/id/ENSSSCT00000088459.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063771.2", "url": "https://www.ensembl.org/id/ENSSSCP00000063771.2" } ] } }, { "isoform_ac": "F1RM85-1", "url": "https://www.uniprot.org/uniprotkb/F1RM85/entry", "sequence": { "sequence": "MFGSLFFTILLISQIKEKVIFGVKGQELVYPKKLPLIQKRNVWHIHEDDIQEAYEEELLYELSLNRKTLILHLLKSREFLASNYSETYYSTKGEEVTTHPQIMDHCFYQGSIIHEFDSAASISTCSGLRGFFRVNDQRYLIEPVKYSDEGEHLVFRYNPKVQHAANYSCTELNFTRTAVLKDNTKSMEDSKMESIEKEKHIELFIVADNNVYHRNPNSKVRNRVWGMVNFCHMGKWLYTSAQGTSYPGGMCLPYYSSSVVKDLLPDLNTIASRMAHQLGHSLGMKHDDYPCTCTLGKCVMDSGGSIPALKFSKCSRTQYQQYLKDFKPTCMFDIPFSDKLSDYPYCGNKKLDDGEECDCGPVQECTNPCCDARKCMLKPEFTCAEGECCESCQVKKAGSLCRPAKDECDFPETCTGHSPACPKDQFQVNGFPCKDAKGYCFMGNCPTRDDQCSELFDNEAKDSSDICYKMNKNGNKFGYCKNEEQTLIPCEEKDVKCGKIFCTGGKHASILGEEKVYHLKKPLTQNVTECKTFFLYHKSKDFGLVAPGTKCGEGKVCSNSECVTIEKAYNSTDCPSPCNENAVEDGDLGCQCEGVQASVDWEETLNVTNISILVVVLILVIIGVLSAVLLIRYQKCIKLKQVQRPPSEALGVENKGYTGDEQQTRTEPILPDIHPLHKPASKEPRGTADPNPSAK", "length": 695, "header": "tr|F1RM85-1|A0A5G2QIN7_PIG Computationally mapped isoform of ADAM metallopeptidase domain 7 OS=Sus scrofa OX=9823 GN=ADAM7 PE=1 SV=4 CANONICAL=A0A5G2QIN7-1" }, "locus": { "chromosome": "14", "start_pos": 8552530, "end_pos": 8483329, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000010574.4", "url": "https://www.ensembl.org/id/ENSSSCT00000010574.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000010298.4", "url": "https://www.ensembl.org/id/ENSSSCP00000010298.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIY5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIY5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100157954", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157954", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A075B5S0-1", "protein_name": "Immunoglobulin heavy variable 16-1", "gene_name": "Ighv16-1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "EVQLVESGGSLGQPGGSTKLSCEEASGFTFSDHWMDWFRQAPGMRLEWLANTNHDESGKGYAESVKDRFSISRDNSENLLYLQMNSLRNEDTALYYCAR", "length": 99 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B603-1", "protein_name": "T cell receptor alpha variable 6D-6", "gene_name": "Trav6-6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSPGFVAVILLILGRTHGDSVTQTEGPVTVSESESLIINCTYSATSIAYPNLFWYVRYPGEGLQLLLKVITAGQKGSSRGFEATYNKETTSFHLQKASVQESDSAVYYCALG", "length": 114 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B625-1", "protein_name": "T cell receptor alpha variable 4N-3", "gene_name": "Trav4n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERNLGAVLGILWVQICWVSGDKVKQSPSALSLQEGTNSALRCNFSIAATTVQWFLQNPRGSLMNLFYLVPGTKENGRLKSAFDSKESYSTLHIRDAQLEDSGTYFCAAE", "length": 110 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B695-1", "protein_name": "T cell receptor alpha variable 9D-3", "gene_name": "Trav9d-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLALLPVLGIHFLLRDAQAQSVTQPDARVTVSEGASLQLRCKYSYFGTPYLFWYVQYPRQGLQLLLKYYPGDPVVQGVNGFEAEFSKSNSSFHLRKASVHWSDWAVYFCAVS", "length": 113 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6B4-1", "protein_name": "T cell receptor alpha variable 6-4", "gene_name": "Trav6-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNTSPVLVTVMLLFMLGMRKTHGDSVTQKQGQVTLSEDDFLFINCTYSTTTYPTLLWYVQYLGQGPQLLLKVTTANNKGISRGFEATYDKGTTSFHLQKASVQESDSAVYFCALV", "length": 115 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6D8-1", "protein_name": "T cell receptor alpha variable 3-3", "gene_name": "Trav3-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "GEQVEQRPPHLSVREGDSAVITCTYTDPNSYYFFWYKQEPGASLQLLMKVFSSTEINEGQGFTVLLNKKDKRLSLNLTAAHPGDSAAYFCAV", "length": 92 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B759-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4E", "gene_name": "PPIAL4E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A075B767-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4H", "gene_name": "PPIAL4H", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFDITVDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTDDKSIYGEKFDDENLIRKHTGSGILSMVNAGPNTNGSQLFICTAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WP50-1", "protein_name": "Secretoglobin, family 1B, member 15", "gene_name": "Scgb1b17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMLAGAVVIFGVALLLLSSWGDCGICPAMKEDVHLFLNGTSEEYVEYVKQYKDDPEILENTEKIKQCVDSTLMEEDKAHANGFIEKIEASPLC", "length": 93 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPA9-1", "protein_name": "Secretoglobin, family 2B, member 18", "gene_name": "Scgb2b18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQSCYSEERIRNILLEPKIMEAMVASPECRSYHSFNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPG5-1", "protein_name": "Predicted gene 13283", "gene_name": "Gm13283", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLADLRSVPGHQCLRDRTDFPCPWKEGTNITQMTLGETTSCYSQSLRQVLHRFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPY7-1", "protein_name": "RNA binding motif protein Y-linked family member 4", "gene_name": "Rbmyf4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKR", "length": 166 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQA9-1", "protein_name": "Secretoglobin, family 2B, member 21", "gene_name": "Scgb2b21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACVPFFEGYASVVSGSRVWMYQEFQAFDATAEEKVALEKIQGCYREESLRNILLEPKIMEAMVASPECLSYYSSNNIRCILDLLSKLLGQ", "length": 112 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQJ0-1", "protein_name": "Secretoglobin, family 1B, member 11", "gene_name": "Scgb1b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLVAAVVILGAALLLLTSGGDCGICPAIKEDVRLFLNGTSEEYVEYVKQYKDDPVILENTAKINQCVDSTLTEKDMTHTTTFLKKIEDSLLC", "length": 93 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQP8-1", "protein_name": "Predicted gene, 21698", "gene_name": "Gm21698", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHGQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR36-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r90", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNEAMKTTEEVALQIVLLCQFGIGTMANILLFIHNFSPLLTGCQLRPKQVICTNMAVSSILILFMTVFPNNVFVVQRNLMNDLQCKLEYFLRMVARSINLCSTCVLSTYQFVTLLPGNFGEMMVRGRRSKVISYSCCSCWLFGVLYNVYIPMKVSGPQNTHNKTDIKSKWFCVTSGFSVGIMFLWFAHDAIFISIMIWTSVSMVLLLYRHYQRLQYIFPPHQGTRGYAEIRAAHSIAMLVVTFVSFYLLHCICFILHIVFVDSRLWLRHVGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYRKPVI", "length": 309 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR44-1", "protein_name": "BTB domain containing 35, family member 15", "gene_name": "Btbd35f15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR49-1", "protein_name": "Secretoglobin, family 2B, member 11", "gene_name": "Scgb2b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQGCYSEERIRNILLEPKIMEAMVASPECRSYHSLNNFRSILEFISNLLGE", "length": 112 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSM5-1", "protein_name": "Predicted gene 29049", "gene_name": "Gm29049", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTSLKKKSRRKPSSQALGNIVGCRISYGWKEGNEPVTHWKAIILGQLPTNPSLYLVKYDGIDSVYGQELHSDERILNLKVLPHKVVFLQVRDVHLASALVCREVQHKFEGKDGSEDNWSGMVLAQVPFLQDYFYISYKKDPVLYVYQLLDDYKEGNLHIIPETPLAEARSGDDNDFLIGSWVQYTRDDGSKKFGKVVYKVLANSTVYCIKFLGDLHIYVYTLVSNIT", "length": 227 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSN2-1", "protein_name": "BTB domain containing 35, family member 16", "gene_name": "Btbd35f16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLLFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLNFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WUL8-1", "protein_name": "NBPF family member NBPF19", "gene_name": "NBPF19", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRNLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLFHSQERELTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGPYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNSVLMEVEEPEVLQDSLDGCYSTPSMYFELPDSFQHYRSVFYSFEEEHISFALYLDNRFFTLTVTSLHLVFQMLVIFPQ", "length": 3843 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WXS9-1", "protein_name": "TBC1 domain family member 3I", "gene_name": "TBC1D3I", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKMKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087X179-1", "protein_name": "TBC1 domain family member 3E", "gene_name": "TBC1D3E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDQAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKKSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0A0MQP3-1", "protein_name": "BTB domain containing 35, family member 12", "gene_name": "Btbd35f12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDSDLSITPLEVPQGLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YW58-1", "protein_name": "Immunoglobulin heavy variable V8-2", "gene_name": "Ighv8-2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGRLTFSFLLLLPVPAYVLSQVTLKVSGPGILQPSQTLSLACTFSGISLSTSGMGLSWLRKPSGKALEWLASIWNNDNYYNPSLKSRLTISKETSNYQVFLKLTSVDTADSATYYGAWR", "length": 119 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXW2-1", "protein_name": "Predicted gene, 20773", "gene_name": "Gm20773", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKIFKVEKS", "length": 232 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXX7-1", "protein_name": "Predicted gene, 20807", "gene_name": "Gm20807", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHTFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKVLEVEKS", "length": 232 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0B4J1J8-1", "protein_name": "T cell receptor gamma, variable 4", "gene_name": "Trgv4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNPGSQALLPLYLPWEANLADENPLLKVVIFLCLLTFGHGKLEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYG", "length": 138 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JE01-1", "protein_name": "Predicted gene, 21663", "gene_name": "Gm21663", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADPPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JGR8-1", "protein_name": "Predicted gene, 21680", "gene_name": "Gm21680", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPSESNEGRRRWTWRMWMAHRQTTSPVPVTSKKQFEKEEKELIKKIQLTTKEINELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELVLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JMD5-1", "protein_name": "PRAME family member 33", "gene_name": "PRAMEF33", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSLQAPSRLLELAGQSLLRNQFLTIFTLDELPREVFPLMFMEAFSMRRFEALKLMVQAWPFLRLPLGSLMKTPHLETLQAVLRGLDTLVAQKVRPRRWKLQVLDLQDVDENFWTIWSGARVLSCSPEAMSKRQTVEDCPRMGEHQPLKVFIDLCLKESTLDECLSYLFGWIHYRRGLVHLCCSKVQNYSMPTSSFRNLLERIYPDSIQELEVWKKCSLNKTGKFAPYLSQMSNLRELFLAFGYERELYVSVQWPCIPDLDSPFLCLYYPQMLYIKKISNIKEHLEHLLRYLKNPLGAFIFSDAYLADRDMECLSQYPSLSQLKELRLIHILMWTTNLQPLGALLEKVAATLKTLVLKDCRIQDPQLRVLLPALSHCSQLTTFNFHGNETSMNALKDLLRHTRGLSKLGLELYPAPLESLDYKGHVNWEILTPIRAELMRTLREVRQPKRIFFGPVPCPTCGSWPSEKVDFHLCS", "length": 474 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JNH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC124905359", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKIANNTVVTEFILLGLTQSQDIQLLVFVLILIFYLIILPGNFLIIFTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFFSEKKVISYRGCITQLFFLHFLGGGEGLLLVVMAFDRYIAICRPLHCSTVMNPRACYAMMLALWLGGFVHSIIQVVLILRLPFCGPNQLDNFFCDVRQVIKLACTDMFVVELLMVFNSGLMTLLCFLGLLASYAVILCHVRRAASEGKNKAMSMCTTRVIIILLMFGPAIFIYMCPFRALPADKMVSLFHTVIFPLMNPMIYTLRNQEVKTSMKRLLSRHVVCQVDFIIRN", "length": 316 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JTV6-1", "protein_name": "RIKEN cDNA 4931429L15 gene like", "gene_name": "4931429L15Rikl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQFNPFSQDTWRHGHRRAYSNISERLSCLTLQEPSVSHLYQIFSPGDRRSYLLDDSLSNSIQRESLAVPMGLEDSGSRGQQKQQQPGAVLEDLEEQEIAPTDVKYRLQLLDEAPLRSKSSSVQSQGHKPGWIPSSKTHREWFKPWKMDMTYPENERSHSGHTQGRRMTPRAQWRHVEYDSQDQDTQSPVWSQALFPGLDKSSQGVIQCTQHVSREREMVSGWSMTHAPQEMGQAKQGPAFLKTKGTAKFNVATTARMSCLPPLKLLEKKVKSRCPPNTPGIFQDWRAQPQGLYGSDERLLAPFEDQVNTRVTYMPLFTEKVKFVSPKTAVSNPKQTHSQLSRTNQPAFPGQFRNWTSGREHLEKGLPE", "length": 368 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JVP7-1", "protein_name": "40S ribosomal protein S26", "gene_name": "Rps26-ps4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKKRRNNGRTKKGRGHVQPIGCANCSWCVPKDKAIKKFVIWNIVETAAVRDISEARIFDAYVLPKLYVKLHYCVSLAIHSKVIRNQSHEARKDRTSPPRFRPAGAAPRPPPKPM", "length": 115 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW93-1", "protein_name": "High mobility group protein B4", "gene_name": "Hmgb4l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGKDSKVRPKVNVSPYVHFMMDFRNQTREQQPNTYYDFTEFSRKCSEKWKTISKKEKKKYEALAKRDKDRYQREMRNYSGPRRERRRRDPDAPRKPPSSFLLFSQDHFDEIKEQHPNWTVAQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAYYHQCQRGE", "length": 168 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW96-1", "protein_name": "Zinc finger protein 94 like 1", "gene_name": "Zfp94l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLPRGSCDVMLESLRNVASLGHRIGTPDGLLRLKREDMFWLLTVARWSSGSMGDKNLEDMEFLEEVGLRHLPHEELFCSQIWQRITRELTKVRDCRVRVGENGSPMKRDNREDEYSKHSSQNSVFQVHHRECHEEEANERDFGCSHHLRTSTGEKSYKCEKCHNASHWFSSLQSHQGVCDRPRWNKSVSQFKIFRQWPLFHYQQSMPNGENAQEYEACGNAGKNSSGQTALFVHTAEEPYSCEECGARFSQSSYLQVHQRVHTGEKPYKCEECGKGFGWLSQLHAHHQSHTGEKPYTCDACGKGFSYSSHLNIHCRIHTGEKPYQCEECGKGFSQASNLLAHQRGHTGEKPYQCDACGKGFSRISDFNIHIRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGEKPYKCNTCGKSFRRSSDLNVHCRIHTGEKPYRCEKCDKVFSQFSSLQVHQRVHTGEKPYQCSECGKGFSVGSQLQAHQRCHTGERPYQCEECGKGFCRASNFLAHHGVHTGEKPYRCDMCGKHFRQRSYLQAHHRVHTGEKQFRCEECGKGFSWSSYLQAHQRVHMGEKPYKCEECGKGFSWSSSLLTHQRVHAEDEGQKDLSSSGGSYRK", "length": 616 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JYP5-1", "protein_name": "Olfactory receptor", "gene_name": "Or8g52b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEGNHSRVTEFILTGLTDKPELQLPLFLLFLGIYLLTVLGNLGMIILILLSSHLQTPMYFFLSGLSFIDLGYSTVIIPKMLVNFVTEKNVISYPGCMTQLYCFIAFVLCECYMLSAMAFDRYVAICNPLRYNVTMSYQVCFWMIGGVYSIGFIEATIHTVCMLQVFFCKANVVNHFFCDLLPLFQLACSSTFVNETVLLCLSTLNFCVPTLTILSSYSFIIARIIRIKSTESRFKAFSTCSSHFSSVAVFFGSLGFVYFQPSSVSSKDQGKVSSVFYTIIVPMLNPLIYSLRNKDVKLALNKLFQKKIFHM", "length": 312 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K381-1", "protein_name": "Killer cell lectin-like receptor, subfamily A, member 4", "gene_name": "Klra4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQEVTYSTLRFHNSSGLQNQVKTNETQGPRETGHRGCSVSWHLIMIPLGILCSILLVTVAVLVTHIFQYSQEKHELQEALNKLHHNYSTMQNESYLNEEMLGNKSSECDAYKSVLDSLNRQQNTCLRLTNIVLDCLQHKGRQVNVHLFCCGIKCYYFIMDKKQWKECEQACQGCKLSLLTIDDEDELKFLQLQVTPDSYWIGLSYDNKKHDSAWIDNNPSKL", "length": 224 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K3S0-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c109", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNQSFVNEFILLGLSQNPQIKKISFVIFLLVYIATLVGNMMIVVTIAYSPALLGSPMYFFLAVLSFLDACVSSVVTPKMIVDMVYERKSISFECCMTQVFAVHFLTAVEVIVLAAMAYDRYVAICKPLHYSSIMNRRLCGTLVGVAWAGGFLHSIIQIAFTLPLPFCGPNVIDHFICDLFPLLKLACTDTHIFIILVFANSGSICIIIFSFLLISYGVILFALRAHSSEGRRKALSTCGSHITVVVFFFVPCILIYARPTSAFSFEKNVFVFTDVLTPLLNPMVYTFRNKEMINAIRKMWKRLIVVSDKY", "length": 311 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K622-1", "protein_name": "Histone RNA hairpin-binding protein", "gene_name": "Slbpl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLSSRMEMVSVGVTTEPCHARWEVETDEVVLRRRQKQIDYGKCTPGYQSFLQQVPRAQRQPGFHPQTPNKNRRYSRRSWDAQIRQWRRALHTWDPPSQPLHDRQAEGKAAGNFLRPVDTAPLDDLLDNWPQDPESSENWDRGEKEAQFAYLKVPASCPPQLKDELLHH", "length": 169 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K698-1", "protein_name": "Lamin tail domain containing 1", "gene_name": "Lmntd1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSHLASSHRVQKSSLARPERRAKSPSYTDISFWVPVMHRVGSQYQFESVCEQSSGYPGMPAQQVTPVPSQRGGILRKEEKTGTITPSKQHSSVHFFPKVMDSSSTLHLLSGSFSHEASANFHQIPSAQDSLSPGGLLTSKSNVPSCSRKDSIPGKQSTHQAASPGTSLMTLKKQPKPSSDLDTYVLGDGEDYFLSLFGDSKKLTSHTSQAEDVSKHLSVILEEVGQFVSSSLGDIKIAEVNVKGFFVRLVNSSNEKEVEIGNYILQQNVNGQAVSLYRFPHNITMQASGTVTVWAAASEAKPQQPTDFVWEEQSRFRSSPDCTTILCKPSGEAIAWYTPIHWKQAWEKLETDIEFERCSVVIPSLKSHIFGRTTSSVSSINKEKQEPTQKTPPQVCSVLLREKEILLTVLPNKSPWCRSPDTPPHPYSSLIEWHDSDFPGSSLGTQPKPQSTKPKPDPGTKEKKSTR", "length": 467 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6E6-1", "protein_name": "Rho GTPase-activating protein 20-like", "gene_name": "LOC120093152", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDEELVRANKTCTCKTIFFYWATGNALATFRSEEQKVQWYTFLTSRSISEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHKIEDYQLWFSPGHKEAPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERRRKSCMTSCFHGGCVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTKSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAVASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQAEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKMFYGRDLSKKLSIIQFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKANTKELEMSSAVPHEGGPTAGHNGTTSKYNVPQEIILHD", "length": 835 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6V9-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVVFFLGQGSYGRVRLAWHRRTQALVAIKTVEISKDTIRGILSEMTTLESLNHPNIISLYEVLITGTGVHFILQYAPGGNLGKLISEEGPLPEEKAKKMFGQVVSAIRYCHSLDIVHRDIKPQNILIDGEGNIKLIDFGQAIKCKPGTLLSRHCGTRDFNAPELVLREPYDGKSSDVWSLGVVLYFFTTGYLPFRGKTINDVEERITTGTYTIPTHLSGQLENLIHQILRVSPDMRPSVEEIENHPWIKKCEFKILPKTDPDYKIIEMLCAMGYKAKDILESLQKKRYDEPMGAYLSLKDHVSKGFDVGYITPAKPGDPCPPPPPSPAHPSVFGLPLRRRASEPIFGLHHRPPSREQNPLDLILSGLKMSRCVSMPPIAVYYPKKERSTSTRALHSTPVACPCVSNNMSEVEIILPPKQDIEMNTSSPPQRMGWFKRLRKGIRDCFSRLCCLPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K894-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAHLLNVTEFIFLGLSPNKEGQRVCFVLFLLLYMAIVLGNLLMVVTVAASRNLGSPMYFFLSFLSFVEICYSSTTAPKLIFDLLAEKKSISVWGCMTQLFFMHFFGGTEIFLLTMMAYDRYVAICKPLHYTSIMNQQVCAVLVGSAWIGGFVHSFSQILLILPLSFCGPNVIDHYFCDLLPVLKLACSDTFLIGLLIVVNGGTLSVISFVVLLASYLVILFHLRTQSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRPSDTLPVDKMIAVFYTVITPLLNPLIYSLRNAEVKKAMKNLWFRIMKADEK", "length": 309 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KB39-1", "protein_name": "Myb/SANT DNA binding domain containing 5 like 1", "gene_name": "Msantd5l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQREANQGESLENTEESNVGKSVKEEEQRPSGRSRSSWTDSEIRVFLQEWEVVEQEMGQPGRKLHKKTKSLCQRLYQQGLKKSWKSCFHLLLSLQDLHRTLCNERPGIEPLFSPYSEALYRILGSTPHESWFPGPLYDEADDSMLPVYPQPPMYQPSDYGITVPSAQLQGNPVPMMCQEDSPFPTWEPWNPSYPLSVPHLLPGFAPGDPSLQQPWSMCDLHQDPQ", "length": 225 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KBC9-1", "protein_name": "Leukocyte immunoglobulin-like receptor subfamily B member 3-like", "gene_name": "Lilrb3l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTFTFTALLCLGLTLRLWIPVLTGSLPKPILRVQPDSVVSMGTKVTFVCEETIGVKESHLYRNGNLQRTVLKNHQKPTNKTEFSFSNVDQQMQQYQCSYRTQTKSSDYSEPLELVVTGAYSKPSLSAQTNPVVTSGGYVTLKCEPSQDNHTLILTVEGSQKHSWRKDPECNRYTEKCHALFYVGPLTSNQRWIFRCYSYEKHTPQVWSAPSEPVELLVSGKLQKTTIKAEPGSVIRSGRAMTIWCQGDLDAEIYFLHKEGSHNTQSTQTLQQPGNKAKFLIPSVTQRHAGQYRCYCYSSAGWSEPSDTLELVVTGIYYYGVKLSGLPSPVVPEGGNVTLHCTSHSNYDKFILTKEDQKFTSSLDAEYIPSTGQHQALFVMGPMTPNYSGTFRCYGYYKHTPQLWSVPSELLKIFISGPSRKPSLLSHQGHILEPGMSLTLQCYSDTKYDKFALYKEGGTDIIESFSQWTKAGLSMTNFTLSVMPNSTVHSGENVTLMCWSTYSVDTFILSKEGSGQPPLRLKSKIQDQQYQSEFSMSGVTSKLSGTYRCYGSHDSSLYLKALIGVSVAFLLFLFILIFILLRRRHQEKFRKDDEDAQKGKELQLSTGAAEPVTRDRGHQKRSNPAAATQEESLYASVEDMETKDGVELDTWKPPEGDPQGETYAQVEPSRLRRAGAISPVVSREQLNTKYEQAEEGQEVDSQATESEEPQDVTYAQLCSRTLRQGTAAPPLSQAGEAPEEPSVYAALATARPGAVPKNKKQ", "length": 761 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KIH5-1", "protein_name": "Major histocompatibility complex class I LLA precursor", "gene_name": "mhc1lla", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTGKVLFVLFLLSAPTTVLTDSHSLWLLGTYIKGETQFPKLSFTVMLDDLRVGFYNSETKEFIPRDNTTNEDEAVSDVLTVIQNTLEPFMMSTLTFKNGTESPQLFQITWHCELLDNDKPGQIIFKIAFSGSTTDEVSFYNDNFTCQCQNNMATVPLESFQMHYETVCYPNCIATIRDYLKKRQTQVNGKVQPKVRLIKKVHPKSGGFRLSCLATEFYPHSINLTLLRDGQPVSDHEVTGGNLLPNGDGTYQMRKSLEIRADEREKHKYTCSVSHLSLDKILDIDFEFDPSFLIKIVIPVVVLLSLMLVLTAVLIHKCKNKRAESKETITTASTPEPTEMSETLRK", "length": 346 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IEQ0-1", "protein_name": "Guanine nucleotide-binding protein subunit alpha", "gene_name": "gna11a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTLESMMACCMSEEAKESKRINAEIDKQLRRDKRDARRELKLLLLGESGKSTFIKQMRIIHGTGYTDEDKRGYTKLVYQNIFTSMQAMIRATEHLKIPFRFEDNKKNALLVREVDVEKVCSFEQPYVAAINKLWMDPGIQEAYDRRREYQLSDSTKYYLNDLERISSRGYMPTQQDVLRVRVPTTGIIEYPFDLENIIFSYLSDLERISDPSYLPTQQDVLRVRIPTTGIIEYPFDLQSIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKILCSHLVDYFPEFDGPQNDAQSAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQHNLKEYNLV", "length": 400 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4ILG2-1", "protein_name": "FXYD domain-containing ion transport regulator", "gene_name": "fxyd2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGVESPEHSDADFTYDYELIRRGGLIFAAVLFCLGMVIIFSKKLRCGKSSATHEDNGDL", "length": 59 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IU63-1", "protein_name": "Metabotropic glutamate receptor 5", "gene_name": "grm1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMLILRMNFFIVFLLFCTRLHLSTERSAVSRAASRSVARMDGDIIIGALFSVHHQPSAEKVAERKCGEIREQYGIQRVEAMFYTLDRINSDPYLLPNITLGCEIRDSCWHSSVALEQSIEFIRDSLISIRDEREGPKWCVEGNPSAQPPATKKPIAGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSIDLSDKTLYKYFLRVVPSDTLQARALLDIVKRYNWTYVSAVHTEGNYGESGMEAFKELASQEGLCIAHSDKIYSNAGEKHFDRLLRKLRERLPKARVVVCFCEGMTVRGLLMAMRRLGVAGEFLLIGSDGWADRDEVVEGYEEEAVGGITVKLQTEEVTSFNDYFLKLRLATNNRNPWFAEFWQHRFQCRLAGHPQENTNYRKNCSGYESLEDNYVQDSKMGFVINAIYAMAHGLHDMHEHLCPGHVGLCEEMDPIDGSKLLDFLLKTSFAGVSGEDVWFDENGDSPGRYDIMNLQYVEPGVFDYINVGSWHEGILSIDDYMIQMNRSEMVRSVCSEPCSKGEIKVIRKGEVSCCWICTPCKDNEYVQDEFTCKACELGWWPDEELQVCEPLPLRYLEWSHPESIAAVVFSCLGILVTSFVTLVFILYRDTPVVKSSSRELCYIILAGIFLGYICPFTLIARPSIASCYLQRLLVGLSASMCYSALVTKTNRIARILAGSKKKICTRKPRFMSAWAQVVIAFILISMQLTLEVTLIILEPPEPIKSYPSIREVFLICNTSNMGMVAPLGYNGLLILSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTSFSVSLSVTVALGCMFTPKMYIIIAKPERNVRSAFTTSDVVRMHVGDGKIACRSNSLLNMFKRKKNASGNANSNGKSVSWSEPGSRHPPKGEHMWHRLSVHVKKQEAGSNQTAIIKPLTNTYNNPGMEFSDLSTKTLYNVAEEDEIDPIRYNPSNSPHLMAPVSKPMKEVGANLTFYTPEQHVPQQNSVLPQHAMIEHFQDDVVKYNSNMADLDEIISLPEPTDGIILALQPQVLHPHPILPMNVYQDEPSSPLEEVENEQFGLLHGYMYDNAQIHDEEELVQIKMAMEDSMALMPPSPFRDSLGSGSPVRNSPVSESVLCTPPSVTYASVILRDYKQSSSTL", "length": 1158 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IUN8-1", "protein_name": "Trypsin inhibitor ClTI-1-like precursor", "gene_name": "spink2.9", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLAQIVLLLCLSVMATAADKCPSVPNCSRYHPHACTMEYWPVCGSDGNTYGNECELCATIFEEKLNIILISKKGEC", "length": 76 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4J2B9-1", "protein_name": "BTB domain containing 35, family member 23", "gene_name": "Btbd35f23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPVSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFTNILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQKCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICNLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNQEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A140T8Q5-1", "protein_name": "BTB domain containing 35, family member 21", "gene_name": "Btbd35f21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMILYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GQX3-1", "protein_name": "Cortexin domain containing 2", "gene_name": "Ctxnd2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCVLMEDSSMSNGIDVDKGFAIAFVVLVFVFLIVMVFRCVKLVKNPYEVSSTTADLPLN", "length": 59 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GRH6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 3", "gene_name": "Zscan4-ps3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVRQFPHGARRASQGTPSHHVDIQSPPTTADVTMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGFPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCKSHQKRFCRDAKLYKCEECSRMFKHARSLSSHQKTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GS00-1", "protein_name": "Predicted gene, 36210", "gene_name": "Gm36210", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHPGSPAAPGVSEPGPRELCAFVSGASAHMLRALQPRRIRPSKRRPNHRRFLHNQICREFAKIEAATQHLALTILSQKAPAQRPPFRRPPPPPPSPFLGVACAEAPMEAPHGSPSLSPVALDTSTLDLFDDILLTPTPRPLVTPDSFCQTLPAGNPQVASDVISHALGPGDQGQPTPIQAPRFSNLLLPPQKAQGGSLEPAALGCGWVDSWEAPYACDPQGVLDSWGAL", "length": 229 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSB3-1", "protein_name": "Family with sequence similarity 236, member D", "gene_name": "Fam236d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATEGVATAHTMLTSRGPRDTREPAPPTRSWRSRFQRALARVSKFFRRGRRTARG", "length": 72 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSI2-1", "protein_name": "Family with sequence similarity 236, member C", "gene_name": "Fam236c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATAHTKENSSRGPRETREPAPCTRSWRSRFQRAVARVSKFFRRRRRST", "length": 66 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYU6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 2", "gene_name": "Zscan4-ps2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEGNVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSVPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYV3-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 1", "gene_name": "Zscan4-ps1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWAIQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYTLTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNTSCNATEGNVGERCGGNEMDSLLIIQKEQHPEHEEGNVVCRFPHGARRASQGNSSHHVDFRSALTPADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSSDNIPRKKTDSLSINKRIYHPEPEVGDIPYGVPHDSTRASQGTSTCLQESLGECFSEKDPREVPGLESRQEEPISDPVLLGKNHEANLPCESHHKRFRRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCFTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1D5P3Y4-1", "protein_name": "Large ribosomal subunit protein uL24m", "gene_name": "MRPL24", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MRLSALLRLAAPPKLPKGYRHGTWRPGTAAERLRNPPGQRRKKIFVEPISREDWKVFRGDTVQVLTGKDAGKQGMVTQVVRARNWVVVEGLNTHYRYVNRDAKYSSTYIASEAPLLLNQISLVDPEDRKPTEVDWRYTEEGERVRVSLRTGRIIPLPLWQRRDGIVPEQWIDGPKDTSVDDALDKTYTPSLKTFEEEIMDAMGIVETRRAKKSYWY", "length": 216 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5PNZ8-1", "protein_name": "ODF3A protein", "gene_name": "LOC124417034", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPATKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5RLF0-1", "protein_name": "F-box and WD-40 domain protein 27", "gene_name": "Fbxw27", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METHLPSLPLMKIFSYLDAYSLLQVAQVNKNWNALASSDVLWRKLCQKRWLFCDMVTLQLQDKETWKQFFVYRTWQEHSKTRANPRDFTYKEIPLQYGPCGYACYISGCGITRKGQDKSVVCMVNSKNTISTWDVHKSVITWVSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNILESPCKSLKAVITKDDPIVLVSDILGNLYIFRIPDLHLISTVNVLPCDIDEIYCSPQKKWVLLSKKQPYILPKVFYMSSLLRTSEFSAPVSTLLEISLCQEAFWTPRREDRLTLMSRSGCSKITKFETYDMKLEEFGNKIIVKGNSIAGFLLPYYTESLNWFGVSDKDTIVCSTEFSLLLFTNNGHRLQTFQYFSETIVRLSVDPVHVIVTCNDGSLDVYAWEERSLLLRKCYRLKNRRHLSPRGFINKTLCDDVSIIQLMIDGHDTWFLMAYALNICS", "length": 466 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1P8ASP4-1", "protein_name": "Serine/threonine-protein kinase PRP4 homolog", "gene_name": "PRP4KB", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVSDKHVESNHRKHRRSFSPSDEVFKSPKRHKSRHHHRRHGHRHHRDEEVQYNDDENVNGGDLDMEEGEILGKEGIGETLKKKLESVDEFGDIKSGQFRENNLAFNGDDGFPLICKSWIRVYNYLSYKCHGRNQRRERECEKRKEIEPDRERRKERGSVDRDSRGDREKDYLRDRDNDRGRSRDKARYSSRERGRENERERRSEKDRDKGREFQSDREKHKSLDDGYGEVRHKHSGHSRHDAEDDLELRSPTSVNGHDPNSGDVKETRGNVERTRIDNDDKGDVVVWEVEQEDEELNLIEESRRRTQAIMEKYKKKLEQQNGFSSHDLELANIPKQSSTVADVLGSGTLGPVTSAVNQAKAGLDIDAVDGEVAKLSSAVGESPAQLVISDSDRTLASTGLGEGSPKDKISDDMFTDDIFGESPADSQKMVCTLTQIIDLVFIEFSNSGFICFVFPVHHLTRYSRNGLPFVHYIFVGYLRGKGNGIPIVRSGLDDNWDDAEGYYSYQLGELLDDRYEIMATHGKGVFSTVVRAKDTKAELGEPEEVAIKIIRNNETMHKAGQTEIQILKKLAGSDPENKRHCVRFLSTFKYRNHLCLVFESLHLNLREIVKKYGRNIGIQLSGVRVYATQLFISLKHLKNCGVLHCDIKPDNMLVNEGRNTLKLCDFGSAMFAGTNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELFSGKIMFPGSTNNEMLRLHMELKGAFPKKMLRKGAFIDQHFDKDLCFYATEEDSVTRKTTKRMMVNIKPKEFGSVIKQRYKDEDSKLLVHFRDLLDRIFILDPQKRITVSQALAHPFITGK", "length": 834 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1P8BFV1-1", "protein_name": "Bax inhibitor-1 family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGLKDFSRISPAIQSHLMRVYFSLFCILAASAFGAYLHMRLNIGGTITKLGWVLSLLEHVVSCPPYKHKIRFSLLLLFGVLHGASVGPCIKSTIDIDSSILITAFLGTAVIFFCFSAVAMLARRREYIYLGGLLSSGFSLLTWLKNSDQFASATVEIQMYLGLLLFVGCIVVNTQEIIEKAHCGDMDYAVHSLILYIGFVRVFLQILSIMWNTSADRIRRNNEET", "length": 226 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1W2P6Q8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7S8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKMRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLIGGLNTPLHESDFSGVTPQQQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLHINPEDGMADHSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQATRDAERVKEMKRMHKAVQKDLPRPSEVNETILRPFDVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGFATNDSEHITYLEHSPYEKFSKEDLKKAQDALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPAQSCYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLEEDVQRQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7Z8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P855-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAIMKYRKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2PP81-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 5", "gene_name": "TAF11L5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A1Y7VLT7-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1Y7VNG9-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRHRGKNENESEKRELVFKEYGQEYAQVTKMLGCLWLEAMCFDGVKRLCHIRGKLRKKVWISTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINETDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YCH8-1", "protein_name": "Predicted gene, 47985", "gene_name": "Gm47985", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGAPHNSAKRHRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPIVLQRAWLTWQLSHAGAALHWALHTVKSILTSQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YD13-1", "protein_name": "Predicted gene 8947", "gene_name": "Gm8947", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKREQLLDKKAEDKQPPESRCNNGRSSKSSPMGKENTWPSREAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDQRSQPRSPVRTLKRSRSGDRQGAPHNYAKRRRQTFPPEASCSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYIWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 301 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YE43-1", "protein_name": "Predicted gene, 47996", "gene_name": "Gm47996", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGVPHNSAKRCRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286ZIN6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258935", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANLTSMSGFLLMGFSDDHKLQILHALLFLVIYLLALTGHLLIITITTLDHHLHSPMYYFLKHLSLLDLCFISVTVPQSIANSLMNNGYISLGQCILQVFFFIALASSEVAILTVMSYDRYVATCQPLQYETIMDPWACRQAVIAVWVTGGLSGLTHTAINLSVPLCGDRVIHQFFCDVPQMLKLACSYEFINEIAVAAFTTSTAFFCLISILLSYTRIFSAVLRIPSAQGRTKVFSTCLPHLLVVTFFLSAAGFEFLRPPSDSQSAMDFMFSIFYTVVPLTLNPVIYSLRNKAMKAALRKVLSKEEFAQRKKYFKALFQL", "length": 321 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZIP8-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259124", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "QEYKANGGDNTTTIIHFVLLGFSDFPHIRPALFVVFLVIYILTLTWNLCLIVLIRLDSHLHTPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECCLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVQVLTAIFTVFFGIINALVIMMSYVYIVISVMKITSAKGRSKAFNTCASHLTAVTLFYTSGIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 316 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZLI4-1", "protein_name": "C-C motif chemokine ligand 24", "gene_name": "CCL24", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFSPSSLIKASGQLQCPAGNRLLAPTLSSCIAALSPELPLLLSRHGRPVTVAASLLFLGLCAYSFAPADSVTMPSSCCIYFISKKIPESRVASYQLSNSSVCPQAGVIFTTRKGQKFCGDPKQLWVQKYMKKLDAKRKKASTRIRAMGTGAPVRRGPANSTSI", "length": 163 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZSE3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258059", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPKLQVLIFIFLFVAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEISFISSCIPRYLYSIATGDKVITYNACVIQVCFTDLCGVTEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSVQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZU87-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100152920", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILETMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDHYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSTVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSWRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZVC9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258401", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZWC4-1", "protein_name": "Zinc finger protein 16", "gene_name": "ZNF16", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLPLSQVPAMPSLRTRPGKAEMEPSVPGPSLRTPGTQVSVSDAPAVTHPGSALHGPLSCGDTEPGATPPHHQLADWDLRTEGSQLLQKEDASEDLESQAGTSEDYVGAGSQAPERGELCADVLGSDWGVPQGERLSLCQEGGFMPAYLLPGSPLEEPEIDTEPLERNFGLIITPVASPGEPEEETPQPFDACDQSVHCGVDLAGHEGLHAAESSFICGECGESVGLHSDLLRHRLSHRGEKPHVCAECGEAFSQSASLESHQRSHEPAKPFQCSTCGKAFGRSSSLIKHHKVHTRERPHACGECGRPFSRFSNLVKHRRVHTGEKPYRCSECGKAFSQSSSLLQHRRVHTGEKPHVCPVCGKAFSYSSVLRKHQIIHTGVKPYSCSACGKAFSHSSALIQHQGVHSGDKPYECRECGKTFGRSSNLILHQRVHTGEKPYECAECGKTFSQSSTLIQHQRIHNGLKPHECDQCGKAFNRSSNLIHHQKVHTGEKPYTCVECGKGFSQSSHLIQHQIIHTGERPYKCGECGKAFSQRSVLTQHQRVHTGEKPYDCEACGKAFSQRSKLVKHQLIHARE", "length": 576 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZX75-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100156955", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "IFIMEWENQTASSDFILMGIFSHTPTHIFLFSLVLGIFTVALLANTVMVLLICLDRRLHTPMYFLLSQLSLMDLMLICTTVPKMARNYLSGRKSISVAGCETQIFFSVSLFGAECFLLAVMAYDRYAAICYPLQYPQLMNWNVCGLLAASSWILGVFDGIVDIAATLSFSYCGSREIPQFFCDITALLRLSCTDTSTFETLVFICCVVMLLFPLSLIIISYTRVIITVIRMSSGEGRHKAFTTCSSHLVVVGMYYGAAMFIYMRPTSNRSPAQDKMVSAFYTILTPMLNPLIYSLRNKDVAKAFSRCWGREI", "length": 312 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZY56-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258501", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "METDNDTQILEFLLLGFSKQPESQPIIFGLFCSMYLITVFGNLLIILAVISDYHLHIPMYFFLSKLSFVDICFTSTTIPKMLWNIQTQSKAITYEGCITQIYFLILFAVLDILLLTVMAYDRFVAICHPLHYTVIMNPRLCGLLVLVPWIMSVLNSLLQTLMMMQLSFCTNFEIPHFFCELNQMIQLACSDTFLNTIVMYFAAALLCGGPFFGILCSYSKIVSSIYRISSAQGKYKAFSTCASHLSVVSLFYCTMLGVYLSSAAAHSSHSSATASVMYTVITPMLNPFIYSLRNKDMKRALKALFVKGPM", "length": 310 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZZP6-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHLPNYH", "length": 402 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7E2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258743", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFPDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKVACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7J9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258750", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVKEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLAFVDLCYATAITPKVLQNLMSTEKSISFIGCMVQLFVYGTFVTSDGYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSCFMGFLNACVNGSLTFQLNFCKSNKINHFFCDAPPILALSCSSIYFNIMLLAAFVGFNLMFTVSIIIFSYIFILAAILKISSAAGRKKAFSTCGSHLTAVTIFHGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMLNPLIYSLRNQDVREALKEIGKKML", "length": 309 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A951-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "LOC100514137", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVHMNVLTDALESINNSEKRGKRQVLTRLCFKVIVRFLTVMMKHGTPIGKFEIMDDPRARKIVVNLTGRLNKCGVISPRFDGQLKDLEKWQNKLLPSCQFGFIVLTTSAGIMHHEEAR", "length": 118 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ACV2-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDAPTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLIKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEDSAWNKLQFYHNPNFKRGCPNLLVRMKRRVRVKNASPVSASLLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSTSTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSVRPPGQIVMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYHRISNFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSVASLSRPNPQSSSISEHHPNYY", "length": 402 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AEV7-1", "protein_name": "Uncharacterized protein", "gene_name": "WFDC10AL", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKWWGLQWLMLSCLAILPASGNWQERISASLEALTQSKLIPGMKPCKTIPTKEQCTYFCDLPRACPTGLLCCSASCGNVCMPPKGHGNRRSSHKISNFLFTAEPIKQQ", "length": 108 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AF12-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTNTKGKRRGTRSMSSSPFRKHGVVPLATYMRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRVYNVTQHAVGTVVNKQVKGTILAKRINVHIVHIKHSKRGDNFLKRVKENDQKKKEAKEKVTWVQLKHQTAPAREAHFVRTNGKEPELLEPNP", "length": 155 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AGK9-1", "protein_name": "DM domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDPDEMPTVPCCPLDSTTGLETGAPWGIEFGPRRAIRRCARCHNHGITDQIKDQEHLCLFQACECHKCVLFSEHCSILPAESALKTMQELHLKRQLTQGLIKSGTTSPKAHSHVKKSSIQTGVLSKLPRCSADRSGIGIFVSVLDSSTLEEATNNFTFQEVTQAPCPAQQAPKTSDQDSDSASLEWQRKLEAAEALLTLRESSQAPSGPTPLLQPSAAPAPAGERGLQPPSRSLRPRPASSISLPIGHVGCISLLS", "length": 256 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AKK8-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100155397", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDVRNHSIVSEFVFLGFTNSWEIQLLLFVFSFLFYSSSMMGNLVIVFTVTLDSHLHSPMYFLLANLPAIDMVFCSITAPKMIGNIFKKHKAISFCGCITQIFFTHAAGGTEMVLLIAMAFDRYVAKCRPHHYLTIINPRICLCFLVTSWIIGLIHSMAQLFFVVDLPFCDLNVLDSFYCDLPRLLRLACTDTQELQFMVTVNSGLLSMGSFVLLIISYIFILFTIWKHASGGSSKALSTLSAHITMVVLYFGPLIFFYTWPSPTSHLDKYLAIFDAFITPFLNPVIYTLRNKEMKVAMRRLFSHLVHYRNIS", "length": 312 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AP00-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258730", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "SRHDLHCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLTGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCDHLAMVSWGVGCMAALGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSMPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTVVTSMLNPIIYSLRNKDVKAALRRTLGKKKVLAHR", "length": 322 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ARD5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258934", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLFYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AT12-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLSFNRTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQFFIIHCIFMSESGILLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIFLRSYCTVFPIIFLLKRLTFCRNNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDILLIFVSYMLILRAVFHMPSQDARHKALSTCGSHVCIIILFYGPGILTTLAQRFGRHIPAHIHILLANVCVLAPPMLNPIIYGIKTKQIQEQVAHLFLKQK", "length": 313 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AUC4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MERINKSHPEEFILLGFADRPWLELPLFIILPMYFFLTNLSFLDMCYTTSIVPQMLFHLGGSEKTISYLGCAVQLYFFHTMGGTECLLLALMSFDHYVAICKPLHYTLIMNRCTCILLVATVWLSGMTYAVSEATVTLHLPLCGHNTLDHLICEIPVLIKAPCGEKGTNELTLSVVCIFMLAVPLCFILASYASIGHAVFKIKSSEGRKKAFGTCSSHLIVVFFFYGPDISMYLQPPSSISRDLPKFMALFHGVVTPTLNPFIYTLRNKDVKGAWGNLVRSVFTSK", "length": 286 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AXC2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVNEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEMLQNFVGTEQSISFIGCMVQLLIYGAFVTSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSYLIGFLNASVHVSFILPLNFCKSNKINHFFCDAPPILALSCSSIYFNVMLLAAFVGFNLTCTVLVVIFSYIFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 281 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AY25-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100155405", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLSNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSRRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDRFFCNLPLVIELACMDTYKVEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRLSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNHHVNSWKY", "length": 311 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B1Z6-1", "protein_name": "Short stature homeobox", "gene_name": "SHOX", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEELTAFVSKSFDQKSKESSGGGGGGGGKKDSITYREVLESGLARSRELGGSDSNLQDITEGSGHCPVHLFKDHVDNDKDKLKEFGTGRAAEGIYDCKDKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTASHLDACRVAPYVNMGALRMPFQQVQAQLQLEGVAHAHPHLHPHLAAHAPYLMFPPPPFGLPIASLAESASAAAVVAAAAKSNSKNSSIADLRLKARKHAEALGL", "length": 292 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B9C9-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWRSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTECPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHHPNYH", "length": 402 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BB76-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100157512", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLGNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSHRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDSFFCDLPLVIELACMDTYKIEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRHSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNRHVNSWKY", "length": 311 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BC21-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152520", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYVAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BF45-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100513333", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPELQVLIFIFLFLAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEVSFISSCIPRYLYSIATGDKIITYNACFIQVCFTDLCGITEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSDQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BGE2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENNQSWIAEFILVGFQLSEEMELFFFIIFFLLYIFNLLANGMILGLICLDPRLHSPMYYFLTHLAVTDISYASSNLPNMLENLVKHKKTIPFVSCTLQMLFYLAFASVECLILVVMSYDRYVAICHPLQYTVIMNWKLCTVLAIISWACGFFLALVQVSLFLRLPFCGPQKVNHFFCEIRSVLKVTCGETWINKIFLFADGVFILVTPISLMLVSYVRILWAILKIQSKEGRKKAFSTCSSHLCVVGFYFGIAMMVYLVPDDSHQQEEQQKILFLFYTFFNPLLNPLVYSLRNAQVKAAFHRIFQKNRTM", "length": 311 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BIM6-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGKRSRRKSPGRQGRTCARTTRAGLSASVSHMERLLREGPYAQCLSSSARVFLAATIEYLTARVLELAGDEAQIVGRRCITPELVAMAVHNNALLSAFFGTLAISQVAPTQE", "length": 113 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BK27-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVTEFIFLGLSNSQELQTFLFVFFLVFYVGIVFGNLLIVLTVMIADFFRKCKVISFKGCLAQIFLLHFFGGSELVILIAMAFDRYVAICKPLRYTTIMSSNVCVGIVAAAWGTGFLHSVSQLAFAVNLTFCGPNEVDSFYCDLPRVIKLSCTDTYRLDIMVIANSGVLTVCSFVLLIISYTVILVTIQHLPSQKSSKALSTLTAHITVVLLFFGPCIFIYAWPFPIKSLDKFLAVFYSVVTPLLNPIIYTLRNKDMKTAMKRLRKWNMNSRIKP", "length": 274 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKA6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259008", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTFNCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLMGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCVHLAMVSWGVGCMVGLGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSIPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTMVTSMLNPIIYSLRNKEVKVALRRTVGKKKVLAHR", "length": 320 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKW4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258932", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILVTMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSTIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSLRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BLZ6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258167", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGGKNSTTITKFILLGFSEFPKLTAVLFSVFLRISLMTVSWNMGLIMLIRMDSHLHTPMYFFLSNLSLLDICYVSTIAPRMLSDFFKKYKFISFMGCTMQYFFSSLALTECCLLAAMAYDHYAAICNPLLYTAIMSPTLCVQMVAGSCVTGFFGSFIQLCALFQLHFCGQNVTNHFFCDLPQLLILSCSDTFFFQVMTSVLTVIFGLTSVLVIIISYGYIIATILKITSSEGRSKAFNTRASHLTAVTLFFGSGIFIYMYPNSGDSLSQNKLVSVLYTVIISMLDPLIYSLRNKEIQDSLSRWRKTIFSWCY", "length": 313 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BNL4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "TVLNARNVSTPKVFILLGFSDHPWLEMPLFIIVLAAYIRTLVGNISIIVVSRVDPNLDSPMYFFLSNLSFLDLCFTTTTIPQLLLNLWGPDKSISYGGCVTQFYMFHFWGATECIFLAVMSMDLQAICKPLRYPVIMHQQLCIFLVVMAWLSGLVNSLLQSSLTIQLPLCGNNKVDDFLCEVPVMIKMSCTDTTFNVAMLSIVGTFYSLVPLSLILVSYGFIVATVLRIQSSEGKKKAFNTCSSHTIAVSLFYGPVISMYVQPSAANSQDKNKLMSLFYSLVTPMLNPFIYTLRNKDMKGAMMRLLVSLYHQRRG", "length": 315 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BSD4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100525471", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENENSTVVAEFIFVGLTQSRNIQLLVFVLILIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNLRACYALLVALWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLMTLLCFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPAIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKRLLNQQLA", "length": 307 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A2R8VHJ9-1", "protein_name": "Predicted gene, 36245", "gene_name": "Gm36245", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSTKNEEQNEDQSEGVVIPHIQDHHCLAILAFCFFFPLGYLAYRSSCKTRTYIEQKEYEKAKATSRCTFAFVLSSIAGGSIIFFCLFSRLFFM", "length": 93 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A3L7ICH5-1", "protein_name": "Cytochrome c oxidase subunit 7A2-like, mitochondrial", "gene_name": "LOC100756118", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYYKFSGFTHKLAGAWALESYSPQGLKPVASTEAPPIVFATPTKLTSSVTAYVYAGKNKVPELQKFFQNFFHLKRGLPDQMLYRTPMALTVGGTIYCLSALYMASQTPNK", "length": 110 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A3Q1LL21-1", "protein_name": "BTB domain-containing protein", "gene_name": "LOC112445444", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGPLNSRNLQCRESGTGELQQPEAQAGPSYVSGSRKRKQSTGPSLGPESEMSHNQEEDLQQVVCTRQGKKVKIKSEYAYQTLFLNGETSDIKIRALGKVWCLHKRFLCQSDYFATMFRDSGKECHKDIIDLEINDQNINVESLQFVLGSLYRNEYVLIKPLQVPRVLATACLLQVEDLIQQCDKTMKETINVKTVCSFYVAAETYGLHSVKTGCFEWLLHNLMTHPSVELYKKLSTDLMNLVISSSNLFVMQKEIDIYTTLKQWMFLRLNPGWKGTMKQLLVNANNWFSRHKEHDGSISFLETKQGIVFQPVFKNLRFQHIICDLASTKVIEQDALIPSEWLSCVYKRQWYTLLRAQQYREIGPRDITETELEEYSMRCGKRIVRDGTYAWKWSGYNFGVHLYVVFTSHFIIFKRHAFSQPYDGSICLQPQRNIAFRLTLVYFGSSGKLSFRKTTGYKILTFEKDEEQMVMKLDSVALSFPLYIFCNFLFISLENPGN", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LLV6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIIIGTLITGYMVTCTCFLHYSCDSEEAHKATKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LUU6-1", "protein_name": "Guanylyl cyclase domain containing 1", "gene_name": "GUCD1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTGPRCRRKQRPSGRPGPRGTRAPQHPTPDAGWTARRAAGAAGAEARGRDLPPQRKPAKPTAPGKGRPERGECPRRADRGGGDPEERAGGRPAWGPGAGRGGAWGRSRLPPLLPPGRWCWRPGKPARAGRALSSPVDARAAAGAGPGPWEPRAARVMRTEVDAEAAGPPLEPDEPTQSLSIQDQETAFLLEDSCQLKPGQPLPGRPWPSGDFVQLPVPIIQQLYHWDCGLACSRMVLRYLGQLDDAEFEQALQELRLTRSIWTIDLAYLMRRFGVRHRFCTQTLGVDKGYRSQSFYRKHFDTEETRVNQLFAQAKTCKVLVEKCRVSVQDIQAHLAQGHVAIVLVNSGVLRCDLCSSPPKYCCFTPSGPRCFCRSPDYQGHFIVLRGYSRAAGCVFYNNPAYADRMCSASISNFEEARTSYGTDEDILFVYADS", "length": 434 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1M0W3-1", "protein_name": "IF rod domain-containing protein", "gene_name": "LOC787600", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTCGSACFSSRSGVRSSSSCVTTQRYAPGRTFSCVSACGPRPSRCCITAAPYRGVSCYRGLTGGFSSRSVCGGSRAGSSSRSFGYRSGGPSPPCITSVSVNQSLLKPLNLEIDPNAQRIKHQEKEQIKSLNSKFAAFIDKVCFLEQQNKLLETKWKFYQNQRCCESNLEPLFNGYIETLRREAERVEADTGRLASELNSLQEVLQGYKKKYEEEVALKTTAENEFVKIKQEVNRAYVLKGDLEANAHSLVEEVGFLKTLYEEELRVMQAHISDTSVVVKMDNSRYLNMDSIVAEIKAHYDEIASRSRAEAESWYRSKYEEIKATVIRHGETLRRTKEEINELNRLIQRLTAEIENAKSQNSKLEAAVTQAEQQGEAALNDARGKLAGLEKTLQKAKQDMACLLKEYQEVMSAKLGLDIEIATYRRLLEGEEQRLCEGISAVNVRVSSSRGGVVCGDLSATRTCGIGSYGVGACGSSCKKC", "length": 480 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MFB0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112441459", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELWRRLLIIVIGTLITGYMVTCTCLLHYSCDSEEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKSTWPPSLQCRVKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVTLFSRELKHFYKSYKKKQPIYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDMFKNSQNN", "length": 361 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MI36-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGSSSGSKAEFIVGGKYKLVRKIRSGSFGDMYLAINITNGEEVAVKLESQKARHPQLLYESKLCKILQGEVGIPHIRWYGQQKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMMGRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASISAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRHLFHILFRTLNHQYDYTSDWTMLKQKAAQQAASSSGQGQQAQTPTGF", "length": 325 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MQ28-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "KEQVLQPTTVVSLEGAVAEISCNHSVSDVYDFFWYLHFPGFAPRLLIKGLGPSQQGRYNMTYERFSSSLLILQVQTADAGVYYCALRYTEAGHP", "length": 94 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MT47-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112444909", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLGCEGGKRPLKPPKKQAKETDEEGKAFKHKQKEEQKTLEGLKGQIMGKVPLATGGIKESGKQ", "length": 63 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MUP8-1", "protein_name": "E3 ubiquitin-protein ligase", "gene_name": "LOC100336539", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSRLTERALPTGTSNGAPSSRRAPVLTGTTVSNNDLASLFECPVCFEYVLPPITQCKSGHLVCGNCRPKLTRCPTCRVPLTSIRNLAMEKVANLVLFPCKYTSSGCGKTMPPTEKADHEEHCEFRPCRCPCPGTSCGWQGSMDAVVPHLMQHYNESIITLRGEVVVFLAVNINLAGTLEWVMLQSCFGFHFLLVLEKLEIYDGHQKFFAVVQLIGTREQAENFTYQLELNGNRRRLSWEATPLSIHEGIATALINSDCLIFDSEVAELFAENGNLSIDVTISMC", "length": 284 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q2TUK0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC121109925", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDEKGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A3Q2UEY0-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418381", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSSYTIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A494C0N9-1", "protein_name": "Protein FAM246B", "gene_name": "FAM246B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATPGRPWAQARSAYRASEVLRRVTGRRRDPGPQSNGPGREDARAPGRLARLLRQLRAEAASRSEVPRLLKLVERAGAGAAGAGERTGAHSRGSVCSVCGEPRGRATYPAGVLEVSERRLQEGLAAVREELGAEIEALRAELRAELDALRALLPPPPPSPPARREPRAVPRAAPRGPTLLRTLGTVSALVAASRPADDAPDGPAECGAHRAPARKNHKKMPVPPGAPQGGGD", "length": 232 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A494C0Z2-1", "protein_name": "Speedy protein E13", "gene_name": "SPDYE13", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A4X1TRA8-1", "protein_name": "Small ribosomal subunit protein eS19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGVTVKDVNQQEVVRALAAFLRKSGKLKVPEWVDTVKLVKHKELAPYDENWFYTRAASTPRHLYLWGIAGVGSMTKTYRGHQRDRVMPSHFSRGSKSVAHRLLQAREGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAAKKKH", "length": 145 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1TY10-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100627324", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENYNQTSIYFILLGLFPSSRIGMFLFIIIVLIFLIALFGNFSMILLIFLDNNLHTPMYFLLSQLSLMDLTYISTIVPKMAYNFLFNDKSISFIGCGIQSFFFLTLAGAEGLLLAAMAYDRFVAICFPLHYHIRVSKRICVLMIIGSWIMGSINSFAHTAYALNIPYCQSRAINHFFCDVPAMLTLACIDTWVYESTVFVSTTIFLLVPFTCIAFSYGRILLVVHHMNSTEGKKKAYSTCSTHLTVITLYSAPFAYTYLRPKFLRTPTEDKVLAMLYTIFTPMLNPIIYSLRNKEVMGALRRVIQRICSVKM", "length": 312 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1U699-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSVSMSKFVLVGLHIWPEQQGMVFALFLGMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLAFSDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFFSCIDNLLLAVMAYDRYVAICHPLRYAIIMKEELCLCLLAGSWLLSCAYALTHTLLLAQLSFCADNIIPHFFCDLASLIKLSCSDTSLNELVIFSLGPAVFIFPLSGILVSYGCIVVSILSVHSPKGIFKALSTCGSHLSVVSLFYGTSMAVYLSSSSGQSHDKDTIASIMYTVVTPLLNPFIYSLRNRDMTLALQILFRNSNLLAK", "length": 315 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1VK25-1", "protein_name": "Elongin-C", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RSYGGCEGPDASYGKLIASDKFIVKREHVLTSGAIKAMFSSPGQFAEKETDVVNFRETPSGIPSAALWKVCMYLPHKVCYTSNTSEIPEFPINSEFPIAPDIALEPLMAANLLDC", "length": 115 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A571BD55-1", "protein_name": "BTB domain containing 35, family member 26", "gene_name": "Btbd35f26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BF50-1", "protein_name": "WD repeat domain 88", "gene_name": "Wdr88", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTKDNEEILNSPDQVRKGSPDVKKKKKIKKKRVKPKGDLDSKKLDFVEDSWWKGSLKNKNLDFAEYNWVLVDNRRVSVDSRKSSADSKRGSADSKRGSADSKRGSADSKRGSADSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKNRFSPKKMDFSEDREISQPTFLRAQQSKVPWALMRALGLFKLSLPDIRRYYNLTSHDPLALDKDRQPREKSHMATVKKFWGNQQPLSKIPYKILIGHDHIVSSCHFCMNDTRFLSSSYDCSVKLWDAEDGTVIWDFEPRPKAPVLECSITADNRRIVASSYDKTVRAWDVETGQLLWKVRHDTFVVCCKFSPNGKFVLSALDVDRGIYLMDPENITTVIHMKDHHQRSITSCCFDPDSQKVASVSMDRCIKIWDITSRTTLFTIPKAHYNAISDCCFTSTGHFLCTSSWDKNIKIWNVHTGEFRNRGACVTLMKGHEGCVSSCCIARDSSFLISGGFDKTVAIWDVGGGYRKLALKGHEDWVTDVAISNNKKWILSASKDSSMRLWNIEEIDKIPLVSENKKAMGLKVRQVGIR", "length": 565 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG45-1", "protein_name": "BTB domain containing 35, family member 25", "gene_name": "Btbd35f25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGLQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG86-1", "protein_name": "BTB domain containing 35, family member 8", "gene_name": "Btbd35f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESRHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A5G2QG78-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100523228", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTRGENTTNITDFVLLGFSDFPQIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHTPMYFFLRNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECGLMTVMAYDRYAAICNPLLYSSTMSPSLCGRMVLGSYMAGLSASLSQVCAMLQLHFCGPNVIHHFFCDMPQLLVLSCSDTFFLQLLTLVLTVIFGILNALVIMMSYVYIVISVMKITSTKGWSKAFNTCASHLTAVTLFYTSIIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDAWKRLKKRKECC", "length": 312 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QM02-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100623139", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTGGENTTNITAFVLLGFSDFPHIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHIPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYVVFSTMGLSECGLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVRVLTAVFTVIFGIINALVIMMSYVYIVISIMKITSAKGWSKAFNTCASHLTAVTLFYTSGIFVNLNSSSGGSSGLDRFAAVFYTLVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 312 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QUE5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524011", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSNVSKFLLLGLPIQQEQQGMFFALFLGVYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFASVTVPKMLMNMQAQDHSISYAGCVTQTYFFMFFACIDNLLLTVMAYDRYVAICHPLRYTIIMREELCICLLAGCWLLSCAYALTHTLLLAQLSFCVDNIIPNFFCDLAALLQLSCSDTSLNELVIYTSGAAVFIFPPSGILVSYGRIGISILRVPSTKGICKALSTCGSHLSVVSLFYGTIMALYFSPSFGQSHYKGIIASVMYTVVTPMLNPFIYSLRNRDMTLALEILIRNKNLFTT", "length": 313 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QWK6-1", "protein_name": "Calmodulin 3", "gene_name": "CALM3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VSAEREEEGVALKFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVTASPVLGPAREGPRASAPSWGGKQPLAIACNQPRRSSGFSWDLPSFENLLSSTLWSPASGDGRGVEHSGRPS", "length": 214 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2R7Y6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524140", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLVAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINHLSGTKSISFVGCATQYFLFLSLGGAECLLLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIVLISASYVFILHSVIHMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2RGH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524855", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGRRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYTVLMNRKVGQMMAVTSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYETAVYISDIVLLLLPIILISASYIFILHSVIRMHSAGSKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALRRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A668KLA6-1", "protein_name": "Predicted gene, 52955", "gene_name": "Gm52955", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMGALLANSPLLLCWLVFGAQLSVGEGILLTLTLMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKQCGVFFFALNLALFGIFAFAQCFNPLVYGLHNRDLQSKLYPSLCCQKKLLP", "length": 296 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KLA7-1", "protein_name": "Predicted gene 7582", "gene_name": "Gm7582", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMWALLANSPLLLCWLVFGAQLSVGEGILLTLTFMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKRCGVFFFALNLALFGIFAFAQCFNPLFYGLHNRDVQSKLYPFLCCRKKLLP", "length": 296 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KM50-1", "protein_name": "RIKEN cDNA A930007A09 gene", "gene_name": "A930007A09Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSLSELPQKNTDLAEMQSGPLGRCSHFFWLGVAFDAVGVAVLFTGVFANLLFYDMLLYLGSIIIFVSLLWWISWYTGNIEALPEDPLRGTSPRESGVHRSGSRRFSLTLRSVSDTFQRIRRRRRRRLHPRVVQRISSISSTDPGQLERNCDARTSGGRALFRSAKPEAVLNQFSRVQTSKSLPLGIVHTGLSICTSRSQPVFSVTSQTYPLASDSNSQMAMSSDSHVYLDSHSQEHSKISVASQIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASQIYPLEQEESQSHFLVPMPSDSFPVVPMTSQSQIQGSLAQQSHLQNLPLASQTPETDKASKSHTLAKGVPGVPPGSAQTQHPQASLAQTSQISSPVRKVPKN", "length": 636 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A8C2LDI6-1", "protein_name": "Large ribosomal subunit protein eL33", "gene_name": "LOC100774916", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRLWCKAIFAGYKRGLCKQRGHTALLKIEGVYARAETEFYLGKRYAYVYKEKNNTVTLRCKPNKARVIWGKVTKAHGNSGMVHAKFRSNLPAKVIGHRIRVVLYPSRI", "length": 110 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LMV8-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC100755948", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTNTEGKRRGTRYMFSRPFRKSEVVPLAMYMRIYKKGDIVDIKGMDTVQKGMPHKCYHGKTGRVYNVTKHAVGIIVNKQVKGKILAKRINVQMKHIKHSKSRDSFLKQVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPQLLEPISYEFMA", "length": 160 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LSR6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "LOC100751955", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSQDEGEKENPMWELHICKLCLSICVEESRDRLTRAAKVLEQLKGETPVFSKARYTMRSFGIRSNEKIAVQCTVHGTKTEEILEKGLKVQEYELWRNNFTDTGNFGFEIQEHIDLAIKYDPSIRIHGLDFYVVLGRPGFTIADKHRTGCIGAKHRISKEEAMRWFQHKYDGIILPGK", "length": 177 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LUM6-1", "protein_name": "Tubulin alpha-1C chain-like", "gene_name": "LOC100757824", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MCECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETDTGKHIPRVVFVDLEPTAIDEVRTGTYRQLFHPEQLITGNEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSRFTSLLMEWLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYPTPLPE", "length": 288 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LZU4-1", "protein_name": "Glia maturation factor", "gene_name": "Gmfg", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSDSLAVCEVDPELKEKLRKFRFRKETDNAAIIMKVDKARQMVVLEEEIQNVSPEELRLELPERQPRFVIYSYKYLHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRATDDLTEAWLQEKLAFFG", "length": 142 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2M625-1", "protein_name": "U3 small nucleolar RNA-associated protein 15 homolog", "gene_name": "LOC100755487", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAGYKPVAIQTYPVLGEKITQDTLYWNNYKTPVQIKEFGAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEIQTFREHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNKNVLCVEHGQPVESVLLFPSGGLLVSSGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAASILSLALSHEDETIVVGMTNGILSVKHRKSEAKKESLSRRRRPAYRTFVKGKIYMKQRDDIMINRPAKKHLEWYDKDLKSFRISKALDRVLEPNCVIKTPEVTVSIIKELNRRGVLANALAGRDEKEITRVLNFLIRNLSQPRFAPVLINAAEIVIDIYLPVIGQSPVVDKKFIVLQGLVEKEIDYQRELLETLGMMDMLFATMSRNDSVSLSENVPAELPEKTESPCQPGDTDKNS", "length": 527 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2MXE3-1", "protein_name": "Glycerol-3-phosphate acyltransferase 1, mitochondrial", "gene_name": "Gpam", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDESSVTLGTIDVSYLPNSSEYSLGRCKHATEDWGDCGFKTTFFRSATLKWKESLMSRKRPFVGRCCYSCTPQSWERFFNPSIPSLGLRNVIYINETHTRHRGWLARRLSYILFVQERDVHKGMFATSVTENVLNSSRVQEAIAEVAAEMNPDGSAQQQSKAIQKVKKKARKILQEMVATVSPGMIRLTGWVLLKLFNSFFWNIQIHKGQLEMVKAATETNLPLLFLPVHRSHIDYLLLTFILFCHNIKAPYIASGNNLNIPIFSTLIHKLGGFFIRRRLDETPDGRKDVLYRALLHGHVVELLRQQQFLEIFLEGTRSRSGKTSCARAGLLSVVVDTLSSNTIPDILVIPVGISYDRIIEGHYNGEQLGKPKKNESLWSVARGVIRMLRKNYGYVRVDFAQPFSLKEYLESQSQKPTSAPLSLEQALLPAILPARPNDAAESEDTSSNEPRNTADEAFRRRLIANLGEHILFTASKSCAIMSTHIVACLLLYRHRQGIHLSTLVEDFFVMKEEVLARDFDLGFSGNSEDVVMHAIQLLGNCVTITHTSRKDEFFITPSTTVPSVFELNFYSNGVLHVFIMEAIIACSLYAVLNKRGSGASAGGPGSFISQEQLVRKAASLCYLLSNEGTISLPCQTFHQVCHETVGKFIQYGVLTVAEQDDQEDVSPGLAEQHWDKKLPEPLNWRSDEEDEDSDFGEEQRDCYLKVSQSKEHQQFITFLQRLLGPLLEAYSSAAIFVHNFSGPVPETEYLQKLHRYLITRTERNVAVYAESATYCLVKNAVKMFKDIGVFKETKRKRVSVLELSGTFLPQCNRQKLLEYILSFVVL", "length": 827 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8D1BQI2-1", "protein_name": "Uncharacterized protein", "gene_name": "LCE5A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSCQQNQQQCQPPPKSLPKYSTPKFPGPCPPLVSSCCGSRSGHGRCYSSGGGGCCLSHHRRRRYHPCQPQSSNCCDSGGGQQSGGSGCSHSSGGSGCCSGGCC", "length": 103 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8D1VKI8-1", "protein_name": "Uncharacterized protein", "gene_name": "NCR3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARMLLLILIRVHSGSCALWVSQPPEICTQEGTPAFLPVPSTPARGDWPLALSHGTGTNWPQGRRVVVLGQGVRTGNGTPLVVERGPAQLATPTIFLLRAGFYAFGFLSVAIGSTIYYQGKCHRHMGTHCRSADGL", "length": 136 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8I5XVN6-1", "protein_name": "SPATA31 domain-containing protein", "gene_name": "LOC689526", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MESFLLLMNSAIESWMNTSTMDIATDLSIAILCGVGLFFLLIPFLKDCPLSPASGNKTDIPKDVKRGRSNTRRKTDVEKGCRDGGKTVEETKTPSQPMKILTRQLLQDSTPQIFWNSSQKLDHLLLSQLFSSLTSLEDLILQKFNRRFWGTSSIFSESVVAMAHVLRNPSFPQQKSVRFSDPCVTDQAPSQAQGLRQQHRYHPRLHRQRKTSLVGMTWVPEKKILPISTPKQIHPCLKRRAYGVSCPTTEKGIQTSLPPECLSHKHGLYSKAVKGYVKRNHQKAIGKPPGNWLRDTLKTKAIRPASILSEHLRMFLHHKEPQTKDKATNVEKQQGTCIRSPPSKKLKQFQGRFPPNTDHYCKRRPQLSQPGQPSILNSKSYKLRKIIQSVLAGMTLMKDRADFSMQSQFSQAPQSSVCNAKRYKYSKRMGSVPRRVPLKKDTARYDMGKPIKKCLGAGTKNVPHSACSILGKRLRARNLALKKGQASVMNPTGNYCLHDSKAEMKLASNNTALPVQCRRTPYLQILEALNPIPPGVLASKLPRIVFPSSPICDFKEEYYSKAATVLKNLHHQDPGGTRVKSTSAASLESALSMCSAAKIQKTQRAPPPAASRGLSKAHTDLLKRHLSIQHSALYFEQGRIIQGTGKGSLQQNTNPQKAKHAPLKSFHEGDSRHHSWNGTMVGPGKRVPPAAAKQTKAVEVKKETPYAWSLGSNESHTGKDINISPRVFGSLGAKRSPGHLQTCTPQHSQDSTLRTQGHRNIILCSNKQPQPRPGRHDPECPSTVHPAKVNLSSEHSMSSFQNTCQKPKTAQGSCERADTKENRVLKDKIRINHLKDLCPHKERQGSIRPTAISQGGRLGRSRPCSLSSTQLKDTAKTRTSDKRQATSKSSWKSDIREVLKYGYVGSKDIIGQEDTSKKDQPPAVTERTEEDWTGEKAMCNMIAHLQYLTNFLFEIMEDTEWDPSKLQGCEVESLTFQLGSSSDSSEGDDDINQGTSTSTMSFGQTSPEMHNCSFTKTGIGDKTQSEIKAKTACDQHLNQVNRGMFSDQLPMPKEYDLSCRYRGIQHQQELGLPDQTFYQYKLRMTHCPHGGTKGHNYSFGYRKLGDQQQPDFTHKALDPHQSAKEDMGCVSCLSPKGSRPVKHRRTDCFSP", "length": 1151 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5XWP3-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "ENSRNOG00000063695", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQRDMCHMTPYRLLCVLVALALSGCNVAQEVTQVQSTASRQEGEEVTLDCSYETSYVAYYLSWYKQHLSGDIIFLIHQISSSTAEERSGRYSLVFQKSLKSISLVISASQPEDSGKYFCALSDLTQC", "length": 127 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y4M0-1", "protein_name": "Large ribosomal subunit protein uL14", "gene_name": "LOC108350588", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQRRGGSSGAKFRISLGLQVGAVINRADSTGTKNVYIISVKEIKGRLDRLPAAGVGHMVMATVQKSRPQLRKKVHPAMVIRQQKSCGRKDGVSLYFEEDAEVIVNNKGKMKGSAITGPIAKEHADSWPRIASNAGSTA", "length": 140 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y5C9-1", "protein_name": "Ribosomal protein L32 like 2", "gene_name": "Rpl32l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALRPLMKPKIIQKRTKKFIRHQSDRYVKIKRNWRKPRGINNRVRRRFKGQILVPNIGYGNNKKTKHMLPSCFRKFLVHNVKELEVLLMCSKSYCAEIAHNVSSKNRKAILERAAQLAIRVTNPNDRLCSKENE", "length": 135 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y6V7-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "Pate4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNTEPLFDIVINCPIAPQFILKILLFPYPANTNLICNTCNRSENSECKNGTGQCTAPEGGSCSTISIYHGQRHVLSKQMCLGHCEEKPHYNGDFMIYVMCCSKNLCNSF", "length": 110 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y7P1-1", "protein_name": "Heterogeneous nuclear ribonucleoproteins A2/B1", "gene_name": "ENSRNOG00000069815", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEREKEQFCKLFLGGLSFETTGESLRNYYERWGKLTDCVVMRDPASKRSRGFGFVTFSSMARPHSIDGRVVEPKRAVAREESGDPGAHVTVKKLFVVGIKEDTEVHHFRDYFEEYGKIDTTEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSGQEMQKAQSSRSGRGGNFGFGNSRDGGGNFGPGQGSNFRRGSGGWESSDGYGSGRGFGDGYNGYGGGTGGGNFGGSPGYGEGRGGYGGGGPGYGNQDGSYRGGYDNYGGGNYGKGNYNDFGNHNQQPSNCGPMKSGNFGGSRNMGGPRDEHRSFPSWKGYNGVFGKQSPLTWIKTHSL", "length": 347 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZKP8-1", "protein_name": "Glycerol-3-phosphate dehydrogenase [NAD(+)]", "gene_name": "Gpd1l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGATTLRVCIVGFWSWGSAIAKIIGTNVKNQQKFASTVKMWVSEEAVNGRKLTDIINHYHENVKYLPGHKLPENVVAVANLSEAVQDADLLVFTTPHQFIHKICNEITGRVPKKALGIIHMESIDEGPRGLMLISDIIREKIGMDVSVLMGANTAREVAAGEFCETTIGSKVIQNGILFKELLQTSNFCITVVDDADAVELCGALKHIVAMGTNFCNGLHCGNNSKAAVLRLGLVEMITFTRIFCKSQVSTTTFLESCGFANPITICYRGSDCKEAKTFPRIGKTMGNLQKEVLNGQTLQGLKTSALVYQFLKQKGLLAKFPLFVTVYRICYEGRPSTEILTCLQNHPAHM", "length": 351 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZL63-1", "protein_name": "Ankyrin repeat domain 13a", "gene_name": "Ankrd13a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSDQSRKAAAEGGSSPMVWSRPARAPPGGRADGRGPIVERTTGEGRAGDESRRARTVGFVRGDLGLPKGPAVPQNGGGRVSRRGGLVGRHGAGLGPFRKSGPPPRSVMERLAYFPVRGGSAGSSRFASCQRGRERAGRGVGAAERVPEPVPSPARDPGPPAPPAPDSEALVVRCARHLAARRSPPLALRPVGRAPETPSGGSRLVAGGRSGLGGDLLAMSSARDTSSRFPLHLLVWNNDYRQLEKELRDQNAEALDPRGRTLLHLAVSLGHLESARVLLRHKADVTKENGQGWTVLHEAVSTGDPEMVYTVLQHRDYHNTSMALEGVPELLHKILEAPDFYVQMKWEFTSWVPLVSRICPNDVCRIWKSGAKLRVDITLLGFENMSWIRGRRSLIFKGGDNWAELMEVNHDDRVVTTEHFDLSQEMERLTLDLMKPKSREVERRLTSPVINTSLDTKNVAFERTKSGFWGWRTDKAEVVNGYEAKVYSVNNVSVITKIRTEHLTEEEKKRYKEDRNPLESLLGTVEHQFGAQGQDLTTECATVNNPTAITPDEYFDEDFDLKDRDIGRPKELTIRTQKFKATLWMCEEFPLSLVEQVIPIIDLMARTSAHFARLRDFIKLDFPPGFPVKIEIPLFHVLNARITFGNVNGCSTAEERQSVEGTQAECAASDATNFEVDQSVFEIPESYHVQDNGRNVHLQDEDYEIMQFAIQQSLLESSRSQDLSGPASNGGVSHAHSYEAQYERAIQESLLTNMEGRCPGGLSDSSRFDSDLRLAMELSAKELAEQELRLQEEEAELQQVLQLSLTEK", "length": 809 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZP24-1", "protein_name": "Large ribosomal subunit protein uL30", "gene_name": "ENSRNOG00000064315", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAVPEKEKKVAAVPGTLKKKKVPAVPETLKKKRRNFSELKVRRLRKKFALKTLRKARRKLICEKAKHYHKECRQMYLTEIRMARMARKAGNVYVSAEPTLAFVIRIRGISGVSPKVREVLQLLRLRQILNGTFVKLSKASVKMLRIVEPYIAWGYPNLKSVNELIYKRGYGKIRKKRIALTDNSLMARSLGKFGIICMEDLIHEIYTVGKHFKEANNFLWPLKLSSPRGGMKKKTTHFVEGGDAGNRETR", "length": 251 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZPV0-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ENSRNOG00000066253", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIVQRIFRLSSVLPSAVSVHLRSNPGVTAVAFNKEPDPVQKLFVDKIREYKTKRQVSGGPVDTGPEYHQDLDREPFKLKQLYGKGEMDKFPTFKFEDPKFVVIDKPQS", "length": 108 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZRI3-1", "protein_name": "Natural killer cell cytotoxicity receptor 3 ligand 1", "gene_name": "Ncr3lg1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASQSCQRGPENAHMHPKGPCCSALCFLCSLGSSPHGSSLGPLRKCGRRSKPVQSSPEGSRVAEWPDGLLSLLLLLWSLLPSAGGLELEMAGTTQIVFLHEDVTIPCKILGSLHLDLSIVGVIWSLKKDGDESEVFKFYGDQLEAVRPGANVSLLGLEHGDASLYLPRFELWEAGEYQCKVVVTPEKKEGTTRLEVVAHPNMSLSEKPATARGGKEKLIICQLDGFYPEALDIKWMGSALKDSHFQEITEGVVTGPTVKNDDGTFSVTSSLALKPALEDHMYQCVVWHRSWLMPQSLNVTVFENTRDSTHGTVPPTAEVGPPVSEPRSVMIYVTIIGLCILLFSVIVCGLWKWKRLTTSNTGLCLRLDVRC", "length": 371 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZS91-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134482834", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPTETEEELPTPTPKPSISEEGNFHSQYQVLGTSGQGGNGKVLLAHNRLTGTPVAVKVLRKDKQWFQPAMMEANIMRKINHPNIVSLIQVIEKETRIYLIMELVEGQELYQYIRESGHIEEDEARQIFEQILSAVSYCHGKGIVHRDLKLDNIMIDKNKKVKVIDFGLSTQFPPGKMLNHHCGTHSFGSSELLLGHRYDRPKNDMWIIGVVLYCMVVGKLTFDSVIIQDLQRQVVAGVYPAPCGVSKELEDLLSKLLRVNPNFRPTARKAMKHPWFKEHWNGLIVPYEELLPLTPDPAILDAMKSIGLQASVVKHTLKQRKYNEEMATYFFLQKQALQGDGCTAQAQQVSPVAAPFPSLDPAAAFRLEPKRSGSLPVLGTLRVSSSHGHVSHYGQNAHPKGGKRYTVAGRLRPLPMTPTQDHYHKCAVSVPCIQTTSIFSEKSSNKKIKEDNPLSHRAPLEDKPIPSRVRHRGFKGWTRNIANALIKLCCCMPRRKKPRLGQNRISPQK", "length": 509 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZT61-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134479845", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVAFFLGQGSYGSVKLAWHRRTQALVAIKTVEISKNTIRAILSEMTTLELLHHPNIISLFQILVTANQIHFILQYAPGGNLVQLISEEGPLPEEKAKKMFGQIVSAIRHCHSLDIVHRDIKPQNILIDGEGNVKLIDFGLAVKCRPGTLLSRHCGTRGFNAPELVLRQPYDGKSSDVWSLGVLLYFITTGYFPFRGNTIDEIEQKITTGTYTVPHHLSGQLENLIHQIFTVSPEMRPSIEEIENHPWIKKCELKIPPMSDPDYKIIEMLCGMGYNAKDILESLQKKRYDEPMGAYLSLKNHVSEGYDLASITPTKPGDPCPPPPPSPAHPSVFGLPLRRRASEPNFGLLHRQPSREQNPLDLILSGLNMGRCVSMPPIAVYYPKKQRSTSTRALHSRPVASPCVYNNMLGVEIILPHKQDIEMNTSSPPQTMGWFKRLRKGIGDCFSRLCCFPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZXB5-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb2l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLSSLPGRNLAMARLLLLLLSAACLHTGNSAGYQEKNDFGVDQPDVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKHYHGEFIYTSTRPFIHEHFKGRLIMNWTPGQTSGVLRILNLKENDQATYFSSVFLQTPEGMKLWQSIPGTKLIIHALDTTMRSPSIIPSVVPTDDLEYTQGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZY57-1", "protein_name": "40S ribosomal protein S26", "gene_name": "LOC134478821", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSPGPRRPRQEAGSKPRELQQRVLASVKRRCLFSSLGSNTTKKKRNNGRAKKGHGHVQPIRCTNCARCVPKDKAIKMFVIRNILEAAAVRGISEANVFDAYVPPKLYLKLHYCVSCAIHSKVVGNRSCEARKDQTPPPRFRPSGAAPQPPPKPM", "length": 154 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYE5-1", "protein_name": "Oligosaccharyltransferase complex subunit", "gene_name": "Ostcl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METKHSALLRTFPFLVLECPNLKLKKPPWVHMLLAMTMYALVVVSYFFITGGIIYDVSIEPPSVDSMTDEHGHQRPVAFLARRVNGQYIMEGLASSFLFTMGGLGFIILDRSNTPNIPKLSGFLLLFDFVCVLLSFFIARVFMRMKLPDCLMG", "length": 153 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYN2-1", "protein_name": "Non-selective voltage-gated ion channel VDAC2", "gene_name": "AABR07051831.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAECCVLVCPRPMCIPPPYADLGKAARDIFNKGFGLGLVKLDVKTMSCSGGEFSISGSSNTDTGKVSGTLETKYKWCGYALTFTEKWNTNNTLGTEIAIENQICQGLKLTFDTMFSPNTGKKSGKIKSAYKRECINLGYDVDFDFDFGWLAGYQMTFDSAKSKLTRNNFAVCYRTGDFQLHTNVNNGTEFGGSIYQKVLCEDFDTSVNLAWTSGTNCTRFDIIAKYQLDPTASISAKVNNSSLIGVGYAQTLRPGVKLTPSALVYGKSFNAGGHKLGLDLELEV", "length": 284 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYX3-1", "protein_name": "Methyl-CpG binding domain protein 3 like 3", "gene_name": "Mbd3l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LGELGNAGRLTGSMIPSRLQKRRKIQVAKSKRKAKHKSGTTLRNPLRLTSCIFPQPVTVITSYPENKTRYRRDEAKLKKPQQLCALERLKNFQFGGDSKENLSCPLELANAVERIARGMQDEASNQSGDKDQLTSGQVTSDQPPYLETNEHVALQLSPSFSSQGVTLPVPLHLSPSYFLRKVTTGDIQRQAWKVKKARKRLAEALEADRLARQTENMRE", "length": 219 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZU9-1", "protein_name": "Keratin-associated protein", "gene_name": "ENSRNOG00000070302", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "SPSTCELSSSLHSDCQETCIEPSICQRSCVASSPCQMPCYYPRSSTACSPCQGTYDGSMGVGSNSLKSFGGFTGSLGYGNSGFGSFGFGSCGIRSQGFGCNFHRPGYFSSKSVQSSYYQPGYTSGFC", "length": 127 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZY5-1", "protein_name": "Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein", "gene_name": "ENSRNOG00000064452", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKIKAVTEESEAQGEGCSQQHRYQELLVYLNPIAQHPGFPPPDLRKIEKGKKKKKRRPTKQKQIRHGVKEVQKFVNKGKKGIMVLTGDTLRGTAIFQLCARTRICPTSIFPLTDLGAAMGSKHPTCVIMVKLHEEYHEAYDKCLEEVQTLATPL", "length": 155 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A2Z7-1", "protein_name": "Developmental pluripotency associated 1, pseudogene 1", "gene_name": "Dppa1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MMPPQVLISGLLLLLPAAWTTTVTSSDQLWNNHTEVVPTQSPLKISTKDLYIGTSVSAALLILLAGVLAVLKYRHRRKKILESAVVFHGFQNGVFQSTEQSQAVDVYVIEDSKVPVAH", "length": 118 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3D9-1", "protein_name": "Small nuclear ribonucleoprotein Sm D3", "gene_name": "Snrpd3l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSIGRPIEVLQEAQGYMVTRETITGEVYPGKLIEAEDNMNCQMSNITVTYRDGPVAQPEQVYICDTKIRFPILPNMLKNAPVLENLKNKNQGSRAGQGKAAILKAQVAARGRGHEMGPWKLPEAKTVFSIKENFPSCLLLGF", "length": 142 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3N0-1", "protein_name": "Uncharacterized protein", "gene_name": "Pramef20-ps2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQTPPTLEKLAIQSLIRNEDVAMSSLGELPAVLFPALFKEAFTGKHINLVKEVVAAWPFPCLLVGALMKTPNLETLQAVLDGVDMQLTRKFHTRRTKLQVLDLRNMHHYFWNIQAGEEDSSCSAENSKEKKVVKVFHRYALRKRVKVIVELYIHSCLKEEQTCLLKWAQQRKGSLHFCCTKMKVWNLSLCGIGEILKVFDPQHITELELHTEWTLLELAHFAPYFGQMRNLQKAFLAPLHRIMFSNSNGKRDREAKCIKKFISQFSKFNCLQHLHMFCVHFLRDHMNQVLGCLMTPLTLSITYYLISQKDLDSLSRSQSLFQLKHLDLRGVVLCDLDIMPLRGLLEKVADTLETLDLQWCKMTDSQLYALLPALRHCCQLTMVNFYSNNFSVPILKDLMQHIANWSRIRVQQYPAPLECYDDLAQVSVKRFAKLSSELMYTLGVIRQTKNISFATDICHTCGQRCVYHNGSRLCCCWH", "length": 480 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3R7-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "LOC120093241", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAARKALTVVAVLGSGAGVGSILFALVTPGELQKQLMLQEMPERDSRRRDAAVRTKELVMATLKDAAATKENVAWRRNWTVRGDGRSA", "length": 89 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3T5-1", "protein_name": "Large ribosomal subunit protein mL62", "gene_name": "Mrpl58", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EHGGRLGPTLEPEPSWNLVAPAARALCSPDSAQTGERHRVQEHLQPGQAVPRIQGRGYRLEGPGEPRKAGRKGRFLLLLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQKIALTHKNKINKAGELVLTSESSRYQFRNLAECLQKIRDMIAKASQVPKEPSKEDAQLQRLRIEKMNRERLRQKRINSTIKTSRRMTMD", "length": 211 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A478-1", "protein_name": "T-cell activation Rho GTPase-activating protein", "gene_name": "LOC134485907", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDVELVRANQTCTCKTIFFYWATGNALATFRSKEQKVQWYTFLTRSINEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHNIEDYQLWFSPGHKETPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERPRKSCMTSCFHGGSVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTNSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAAASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQSEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKTLFGRDLSKKLSIIKFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKSNTKKLEMSSAVPHEGGPTAGHNGTTSKYNVPQEKILHD", "length": 834 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A4C1-1", "protein_name": "RRM domain-containing protein", "gene_name": "ENSRNOG00000063783", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LTCCAINSDPHPDSGLKMEGHDPKEPEQLRKLFIGGLSFEATDDSLREHFEKWGTLTDCVVMRDPQTKRSRSFSFVTYSCVKEVDAAMCAQPHNVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIKTMEVMEDRLIDKIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGRGGNFDGRGGYGGGGGGSRGSYVGGDGGYNGFGGDSGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGGYDSYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGRMKRGRFGGRSSGSPYGGGYGSGGGSGGYGSRKF", "length": 350 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5E5-1", "protein_name": "Paired immunoglobulin-like type 2 receptor alpha", "gene_name": "Pilrb1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQILLLLLSATCLHTGNSGGYTRKNYFGVNQPAVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKEVHGEFIYQSTLSFIHEHFKDRLILNWTQGQTFGVLRILNLKENDQATYFSQVCLQTTEGMKCWQSIPGTKLIVTHGVICSLLISPQLSYDHEDPLHHHLCRPHSWPGEHKGPKESFTAEPGGHHWDGRGQSCSHHPPLRMDDLSVVEAKASRVTPKPQPE", "length": 230 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5T5-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "Rpl21l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRGTRYMFSRPFRNHGVIPLATYIRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRAYNVTQHAVGIIVNKQVKGKIPAKRINVRIEHTKHSKSRDGFLKRVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPELLERSPYEFMA", "length": 160 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A8T3-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RMNCSQAPGFILLGLSRDPEKWQLFFSVFLVLYLLGLSGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKILQTLWTGDGSISFSGCLTQLYFFAVFADMDNLLLAVMAIDRYAAICHPLLYPLLMTPCRCGVLVSGSWGVAHCVSLTHTLLLSQLYFHTNQMIPHFFCDFGPLLLLSCSDAHLNEGLMMALAGVFGISALLCIVSSYSCIFYAVARVPSAQGKRKALATCSSHLSVVLLFYSTVFTTYLKPPSSSYSSGEVVAAVMYTLVTPTLNPFIYSLRNKDVKSSLRRILNMVKSPD", "length": 310 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A969-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000067430", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFFLFWTFPGLELDKLALLSFESSSSIHPRACASTPAFQRSHNPGDAAQQEAKQREAEMRNSILTRVLDQSAWVRLSDLALVKPDKTKAVEHRVQMARYGQLSGTVSEQGFIETPEKVSQQTEEKATVKFNRREVTDSDEDDDY", "length": 144 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A9H4-1", "protein_name": "NAD(P)(+)--arginine ADP-ribosyltransferase", "gene_name": "Art3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQATARGVIKRKAFPGRQLSLSTTSCPGGKITPAESGNRFESGHHLNVLQRHKRQKRKMKMGHFELVTTLLAAMVLMDVFQVQAEVLDMAENVFDDEYLKCNSRMEMKYIPRMHGEELANDELLQSVWDKAGIQWEAQKAQLSLPKNFKDAYGIALTAYVTEAQDQSPFYHTFNRAVKIAGLSRRRYIYNFPFKAFHFYLVRALQLLRRPCEESYKNVVYSTSPNISFAFGEQNQARLGNFTLAYSAKPQTANEQRLLTIQTCFGVAVGKLLNKESEGIVLIPLSEVFQVSRKGTDDDLILHSINSTCSYYECSFLGGLKAGSCTTNPENPDPGYLNNPDLDSQKLEDSGRKSLDSVKMPEIKVLQGEENPLLPDEKPEDRNRGKANVPTPGLVPVPGPKSHPSSSSGHRLLPSDTASTILLIAAAVDFIAL", "length": 433 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AA84-1", "protein_name": "Ankyrin repeat domain 10", "gene_name": "Ankrd10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSAGAGAGVEAGFSSEELLSLRFPLHRACRDGDLVALCSLLPHTPRAHLAAEDSFYGWTPVHWAAHFGKVGAGTLRRHFPRGVLLGSERTPPCLESAATARSAPPAPPEGSRAHVQQSGLGVKGWGRGGAEAALAPPGVQGACAAARSPGPRGARGVMGGGAEMGSVWPAPRRTQGACAHLWLFRAGRADRMQLRRFARRPSGFGEWCGRLLLEARREPGASRSCLMETGRRAPLRHKGMDAALAAGGVRSAPAVVDGGLAARPTGPLSQLGPPCLECLIQLVRAGASLNVSTTRYAQTPAHIAAFGGHPQCLVWLIQAGANINKPDCEGETPIHKAARSGSLECISALVGNGAQTDLRNASGLTAADIAQTQGFQECTQFLLSLQNHQMSRFCPNGTLSGGHENILPNHINLGTNRKRCLEDSESLGVKKARTRVPSLDHTMPLANGDAEDDADRMHVDREFAAVSDMKNSSSVLNTLTNGSVINGHLDFPCVAQLNGMESRSDPCLTGSNGISNGQPFPSGQGPVCANGTEEPEKTMGVNPEMCGSLHLNGSPSSCVASRPSWVGDIGESLHYGHYHGFGDTAESIPELSSVLEHSSCVRVEQRYDSAVLGAMQLHHGS", "length": 621 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ABF4-1", "protein_name": "Nuclear transport factor 2", "gene_name": "AABR07018058.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGDKPIWEQIGSSFIQNYYPLFDNDRTQLGAIYIGASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSIMAQQYQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRLALHNSS", "length": 127 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC04-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r38", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSMLSQNKTLKSIEEVALHVILLCQVGVGTVANFLLFIHNFSVILTNCQLTPIQVIVTNLAVASAFNLLLLAFPNNVTLFVPRKAPSDLSCKLWYFICLVARSTNLSSTCVLSTYQFVMLLPGNWSRVILKGRAPKIVNYSCYGCWIFSVLNNAYIPVKVSGPQKTQNDTDFKDKWVCSTSGFSVGMSFLRFAHDALFISIMIWTNVSMVILLNRHHHRLQHIHSSNQDHRAYADTRAAHTILMLVVTFLSFYLLDCICTFFHISFVDSRLLLRRIKEVLTASFPTISPFLLIFRGPKNPCSLLSRS", "length": 307 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC51-1", "protein_name": "Non-histone chromosomal protein HMG-17", "gene_name": "Hmgn2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKADAGKDANNPAENGDAKTDQAQKADGAGDAK", "length": 90 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC66-1", "protein_name": "Eukaryotic translation initiation factor 6", "gene_name": "Eif6-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVVRASFENNCEVSCFARLTNTYSLVAIGGSENFYSVFEGELSDTIPVVHASIASCRIIGRGTSVWGTGMGYWYPTTTTDQELQHIHDSLLDSVQIRRVEEGLSALDNVTTCNDYVALVHPDLDRETEEILAGVLKVEVLTVADQVLVGSYCVFSNQGGLVYPKTSIEDQDELSSPLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSLIDRLT", "length": 245 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ACC5-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000069094", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LPLLAFEKYVVCDGELQRLQVSCEVLGDVDPPQRLSASVVQMKQSVVEFLGTLVEQDAQGAAEDMDNALVGDNEEAEGENNSTRTNSDGPFTERPNQRLNNR", "length": 102 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AEL7-1", "protein_name": "Protein phosphatase 4 regulatory subunit 3C like 1", "gene_name": "Ppp4r3cl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEDKLYRVKVYVMMEDKQWKDIGAGQISSKYIDRLQGVCLLVHSESDGSPILECKIQPNVPYQKHQGKVIIWSEAKNHGTAIHFQEPNDCQETWEVICQVQGKDPNVEITQLLTDDLESFKDMLLSWNKVEMSSCELHTLENIADLLSFVNEAPSHKKILTLVLEKEGYIKKLLQLFKTCEKHQNIDGLHYLNNIIRGILFLDNIHLFNIMFSDEFIMDVVGCLEYGPGLDEPKQHRQFLTQNVKFKNVMQITHSQLRKKIQQTYRMQYIYDIVLPTPSIFEVNLLHDLSTMIFFNKIEIITMLQEDEHFLLEVLAQLKDNTVSNERRHELLLFFKEFCAFAKTLHFQKKNTLLKTLIKLGIISALKVVVHMHDYQIQVAALELFAHLVEYSPRLIRAYAMKEAQYSEDNDGLLINIMIKQMTCDSDPEFSRSIILTTVLHAILDPENMRVTTKGHERRKFLNYFYRHCMNKLIEPILSITVENNSDDNRVNICPDNYQNAQLLGAILEILTFCVQYHSKYVKNYIISKNLLSRILILMSSKHTFLILCAVRFMRKMIGLKDKMYNLYIVEKNLFEPVVNAFMHNGHRYNMLNSAIIELFEFIRQENIKSLIANIVEKFFMFFESIQYVQTFKGLKTKYEEEKKKKRERQLRKSLHNIIYQRIYCRHIKAMEVKVKADIFCRQITDKEEEREKGGGGGEGGGGRGGEGEGGREGGGREGEGGGGGKGGRGEGGAVLSMGSDIPSHYDMFVKINEMNERENVIECRKRKSSATSEYSTSCGDTSDNGISTVYCSSLVPLVDYAYDTDGEDDDGSYGNNENEEEEEEEEEEEPPKKKPYFHP", "length": 840 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AFG0-1", "protein_name": "Cytochrome b5", "gene_name": "ENSRNOG00000064959", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFAKEKGKFEDMAKDVKCYTLGEIQKHQDIKNSWAMLHHRVYDLTKFLEEHLGEEEVLRERAGGHASENFEDVGCSTNVQGLSKVHIIGLFHPALITTIKLNSNWWDQLCSPTSQVVVAHTFNPSTREVGAVGFP", "length": 135 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGM4-1", "protein_name": "Proline rich 18", "gene_name": "Prr18", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLRLLGRVMSFSPMPPPPPPPPPPARTQGGPAARQLSRRPCGPPAASPPAPAAAAAGEKKRRPPEMLLSSSWPSATLKRPPARRGPGLGPGTPQPPTSARVPPQPSPGRGGTSATCSAPRRIACSHIPAGSTASGTSAGAGAGPEDATRFSLSLTPEAILVIQRRHLEKQLLARPRRPFPAPSADPRRPLVPCPRTRSSTLRRGGPTSVPDAPLAVAVSSRPPRASLLPGGLQATMPSPRPSSLRPVLKVSLLNEKHKYDDEEYEEEVEVVDEGLVRKCTEWLRGVESAAAARGRTGHLDSLPHLSTL", "length": 308 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGS9-1", "protein_name": "Olfactory receptor", "gene_name": "Or5aq7b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVWNSTGVKEFILIGLTENPNWQVPLFLLFCIIYFIILVGNCGMIFLIWLNVQLHTPMYFFLSNLSFCDICYSTIIAPKMIINFLSEHKSTRLFACILQSFFFAVYATTEVVLLSMMAYDRYVAIANPLMYTVIMTQSICTQMILASYLTGLINSLIHTIGLLKLNFCGPNIVNHFFCDVPPLLKLACSDSHINEILLLVFSGIIAISTLIIVIVSYIHIIIAILRIRSAMGRGKAFSTCASHLTAVALFYGSLTFSYIQPSSQYSMEQEKVSAVFYTLVIPMLNPLIYSLRNKDVKEAAQKLMLGKRNAC", "length": 312 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AIA3-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065493", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIFVPFFPHPGSIRKDGVVYAHTMENSSNSPRETREPAPLRRTWRGCFQRALPRVSKFFRRGRGSTGGWDNGSPRQGPMHSDQDLRHLRSLLSKESCPVMSK", "length": 102 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AK52-1", "protein_name": "Olfactory receptor", "gene_name": "Or9s14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAIEVHRNGSLSAMSLQGFVLLGFRGGAETQALLFTVFLVLYVVTVLGNLTMIMVITLDARLHSPMYFFLKNLSFVDLCLSTVVVPNALASIFFSSKTISFAGCATQFFFFSLLAATEAVLLAVMAYDRFMAICSPLRYPVTMCPMTCVRLVLGTFCVACLNSIVQTSLTFRLPFCSSNRIDHFYCDVPPLLQLACASTALNELVMFGICGFIIVCAVFVVIISYVYITVTILRMHSGSGRHKLFSTCGSHMTAVSLFYGTGFAVYGQPGGVASMEQGKVVSIIYILIIPMLNPLIYSLRNKDVKDALRRLGQRHSLAKESG", "length": 322 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMC4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "ENSRNOG00000068014", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCVFKNAWGHRNMCSMALCSQFGTHLHVSLTDAHSLSCNLIIRSPTKAEPLRYEGHCSMDEIVFLSFNNVNKTMPLGNQEKMANATKVQKCLTQWIDLLGQDLRDKVSEIKVHTTKTSGHPTLRVTMLSKHRHGEIIGASWEFNISENYSFILDLKTMKWKPQDIMKEWKDDETLMKHLNLSIVECSQKFNEFLNQHEERTSRYYLDSALPPAPPPLFKGFTILLWHSYTPAISPTSSDTHSSFINFRDGLIDINFPL", "length": 258 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMN7-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "ENSRNOG00000070681", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPGYITLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLACAEKKAAGKGDVSTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVLYCIIKGKARLGRLVHRKTCTTVVFTQVNSEDKGALAKLVGAIRTNYNDRYNEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMX9-1", "protein_name": "Ribosomal biogenesis factor", "gene_name": "Rbis", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKNKLKGQKSRNVFHIASHKPLKAKNKAKPVTTNLKKINIMNHEKVNRMNRAFVNIQKELANFSKSLSLKSVQKELHHEKEPANVDEATRLMAQL", "length": 96 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ARJ3-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "Or8b101l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTLGNVSSVKEFILLGLTQQPELQLPLFFLFLGIYVVSVVGNLGLIVLIVLNPHLHTPMYYFLFNLSFTDLCYSTVITPRMLVGFVKQNIISHAECMTQLFSFCFFVIDECYILTAMAYDRYAAICKPLLYQVTMSHQICLLMTVGVYMMGFVGAMAHTGSMLSLTFCEGNIINHYMCDIPPLQKLSCTSTSINELVVFTVVGVNVIIPTLTLFVSYTLILSNILSIHSAEGRSKAFSTCGSYIIAVSIFFGAVLFMYFKPSSASVDGDKVSTIFYTILGPMLNPFIYSIRNKDVHVALRRTLKKRIFT", "length": 309 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ATM0-1", "protein_name": "ELAV-like protein", "gene_name": "Elavl3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKDAGAGSCRYKGLGAAAVRPRARSAQRGPVGGREGGREERTHYPAPDRPDRGPAAEGRAAEISVGKSDFCGPRGAALRAPSTARPLPPSTCRQGSGRRSAHPQARVSSRPSRAPPPPSSPLRRPQSQTPGRDPGVSTRRPPRSARPPEPPSIRTAPAGHTRMVTQILGAMESQVGGGPAGPALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSKQHKA", "length": 522 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AUS4-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "ENSRNOG00000062467", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTAAGKTLAVVAVLGAGAGVGSILFALVTPGELQKQSMLQEMPERDSRRRNEAVRTKELVIATLKDAAATKGNVAWRRTGQLEGQGRMCGTKGTNKCSLPIKWISQLDI", "length": 110 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AWY6-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065059", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKATKKSKNTTSDVEPSTSSAKSKKAKTCYQYQTRAGEKKSRWSGSDCSVNVQKTTKKAKRTLPRIAENNTSEKTVPPTKKTKRAKDEQLFGHYHRLMDEISTSTERGPEQSSTDSSSASTSDEESQ", "length": 128 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B5G4-1", "protein_name": "protein-tyrosine-phosphatase", "gene_name": "Ptp4a1l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARMNCPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCKATHDTTLVEKESIHVLEWHFDDGAPPSNQIVDDWLSLVKIKFPEEPGCRIAVRCVAGLGRAPGLVALALIEGGMNYEDAVQFIRQKRRGAFNGQQRLPLEKYHPKMWLRFKDSNSHRNNCCIQ", "length": 173 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B646-1", "protein_name": "Ankyrin repeat domain 66", "gene_name": "Ankrd66", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSREARLHHQTPGDQEAGAACLLSWGGGGASFHGVNTLTLRPAMMACSTELLKDTDSVMELSKLSDMTKLHQAVAAGDYNSVKKILKKGLCDPNYKDVDWNDRTPLHWAAIRGQMEVIHLLIQYGARPCLVTDVGWTAAHFAAESGHLNVLKTLHALHAAIDAADFFGDTPKRIAQIYGQKDCVDFLDTAEPECRDHRQRGLLFDERDPDWDLKKRELELSLPVPDQNTNKKKKRIRGSTRVNHSKAWRI", "length": 251 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G1V0-1", "protein_name": "Ankyrin repeat domain 62 like", "gene_name": "Ankrd62l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRVAGLSSKKSRWLLQSLLDQQRHSLGTGFESANILLSPKYHLKDKDLRKIHKAARDGDAARVQQLLLGKHCVNDKDKKKRTALHIACAYGHPKVVMALVEGKCEVNATDSEECTSLVKAVQCQEEECATILLENNADPNIVDAQGNSALHYAVYYKNTSLAAKLLDHEVNIEATNKDGFTPFLLAVSENKLKIAKFLLMKNASIHAADNQKRTALMHAVSHDSTNLVRFVLEQGVDLFVKDAFGLTAIDYAADFKYNSNMEILLEYKAKRYEESERANLVEKSSEEDSSRRKDQQSQELENMEKEELTEPGNGTEEQEPDGGVTSVEEPRRLDDRGDDQPQEAVTAPRTREKEQELPFTDMCTVVTGKEDEDESSWDSESVSENLPLIRIGVDGLLLVNGQAVENPEKYLHWLHNRKGEESVPNETKGVGDLQAFTPAEPGLELTSEEKHEELSRNEDCQPQVEEERTQEWSGWGAPEALCAAALDHGDIGSPLTRENGHPRARQSPSVDSEEQDGGSGLNIKEEKTRDHEEWSGDFLMDRTSKESEPAAGDLLQVKDSWSLNDTDPNKGSPAKRKSKEKHKVRGEMNAMEDADDFTPLSESCSDNKAELCCNTHQAETETESCELLTRQTGNMEGGVAGEVLKTEPARSREALKETEETGEGARVKMQLPGKDELYSEDAERQQYDMALSALHLKTKQTVRQLQETQDRQREVVRSSQRMQDHLQKLQAGCSEAEAMVQEQGKKTAELQKLHAGMIHELKEKWETIASKYLPLNIQLKYLEQELLSIKIAQKQYEKLHEDQRTLQRDAVDLQHQVQENMAKLDDEKQAMALRDSNNDSLMSQVELRIKNLESNLQKLQAEKESNERNVEKYLQRYIRERELSKTLSHTLHRTNSKLSRVRTDILLVTERNRTVQNTLTTRPVPKSPGVTEHSAYVNRNPNFIASRNLEAAMSSPQPSPELMRRRLLKKQKNMVKNITEEVDKAAAELESWSLEAYPSGSK", "length": 1003 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G430-1", "protein_name": "Large ribosomal subunit protein eL24", "gene_name": "LOC689816", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLETCRNLSAIGYIWEDNSTEEYCKSSRRHGRPTSVTMKVNLCSFSGYKIYSGHERLYARTDGKFSSFLMPNVSPHSFPKGTLGKLTGLSSTEENTRKDSRKKFKRKEPTLQKFQRAITGASLADIMAKRNQKPEVRKAQQEQAIRDAKEAKKAKQASKKTAMAAAKAPTKAAPKQKIVKPVKVSAPRVGGKR", "length": 193 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G808-1", "protein_name": "Paired immunoglobulin-like type 2 receptor beta", "gene_name": "Pilrb2l7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARILLLLLSAACLHTGNSAGYPKKYDYGVDQPAVLSGVQSGSIEIPFSFYFPWELAKDPQMRIAWRWKVFHGEFIYNSTQPFIHEHFKGRLIMNWTQGQTSGVLRILNLKENDQATYFSRVFLRTTEGMKSWQSIPGTQLIIHALITTPGSPSIIPSAVPTTGLEDTRGQRTPSLLNLGAMVGMVVSKVVVIIPLYGWVIFLWWKQRTQFRRDLVSEHPWKNFVPILPAESSSFL", "length": 236 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GB91-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c117b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TNRYYFNIFMIIMQNQSFVTEFILLGLSQNPNVENILCVVFLFIYLATIGGNMIIVVTIIYSPALLGSPMYFFLIFLSLLDACTSSTVTPKMIVDFFYERKTISFECCMTQLFAIHFFTGIEVIILSAMAYDRYVAICKPLHYSSIMTQRLCGILVIVSWAGGFLHSIIQIIFTLQLPFCGPNVIDHYLCDLFPLLKLACTEPHIFVILVFSNSGSISIIIFSILLVSYGIILFSLRAHSSEGRRKALSTCGSHITVVLLFFVPCFLIYARPTSAFSSEKNAFVFATIITPLLNPMVYTFRNKEMKNAIRKMWKRLIMVSCNY", "length": 323 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GF85-1", "protein_name": "Ceramide-1-phosphate transfer protein", "gene_name": "ENSRNOG00000064148", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "HFFLEYLNNLKIMLIFLSPPTGGWASDHHSPTTGTHLRFLNSLGAAFSFISKEVVSKLQIMEHPRSSPQSEHCSSLQSMAAYEVSNKLLDLARRSGPLHSNSGCRTVLCLHRALHWLQLFLEGLRTSSEDARTSTLCTEAYSAMLCAYHSWIRQAVTVAFCALPSGKVFLEMLGEALPFMEQMCDISQFYVEHFLLDLP", "length": 199 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GFV7-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f21c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLTMYLATVLGNLLIILAISTDARLHTPMYFFIMILSFTDVCFSSTTVPKVLANYMLRSQTISFSGCLTHLYFLCVFADMDNFLLAVMAYDRFVAICHPLHYTTKMTNKFCVLLIVGSWVLTNLNALLHTLLMAQLSFCGDNIIPHFFCDATPLLKLSCSDTHLNDLMILTEGTMIVVTPFFCILISYIHITCAVLRVSSPRGGWKAFSTCVSHLAVVCLFYGTIISLYFNPSSSHFAGKDMAGAIMYTVVTPMLNPFIYSLRNRNMKGVLRKVLILRFPSKQ", "length": 313 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GGC1-1", "protein_name": "Histocompatibility 60b like 1", "gene_name": "H60bl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKGATSKCNHSLTLSLLVLLNSLGTMQVDGTDSLSCNFTVQYKVSLGQCSVNGMTVLCFDDVRQNSPVCKTEKKGNATKLCNDLNQCLSYSFYEMMKLESGLFESKGNHTLRVTVQSQYNQGEFMDGCWAFMIDRQYPFYFYPKNMTWRENQPNAIKTMSQWENNRELFQSLKFLSTGDFSLCLKKLLTDSRELTRSTIKAPDTTQPTSTTQSPSTGNSTPAMSSNQSPSTGNSTQPTSTTDYLIVFEFTAIFLALIVVSMEKKKVLPAAPLPLQYELQSPSPAVLEES", "length": 290 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GIM2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x11c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADLFNVTEFIFLGLSPNKEVQRVCFVLFLLLYMAIVLGNLLMVVTVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLILDLLAEMKSISVWGCMTQLFFLHYFGGIEIFLLTVMAYDRYVAICKPLHYTSIMNRKVCIVLVGTAWTGGFVHSFAQIVLIFPLPFCGPNTIDHYFCDVLPLLKLACSDTFLIGLLIVANAGTLSVIIFVVLLASYVVILFHLRTLSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRRSDTLPVDKMIAVFYTVITPLLNPLIYSLRSAEVKKAMKNLWFRTMKADEK", "length": 309 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJN1-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein A1", "gene_name": "Hnrnpa1-ps20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LSQSPPRNRTEQLWKLFIDGLSFETTDESLRSHFERWGTLTDCVVMRDPNTKRPRGFGFVTYTTVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGSIKEDTEEHHLREYFEQYGKIEVIEIMTDRGSGQKRGFVFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGRNGSGNFGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGSRSSGSYGGGGQYFANPRNQGGYGGSSSSSSYGSGRRF", "length": 319 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJR0-1", "protein_name": "Aspartate aminotransferase", "gene_name": "Got2-ps6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLHSRMATTFHPGLAAAASARASSWWTHVEMGPPDPILGVAEAFKRDTNSKKMNLGVCAYRDDNGKPYMIPSIRRQRPRLLEKIWTKNAYPSGDWLVFVRLLQRSEPVFCKDILSLAKMSFYPNHPGETTRPSSGMPACSYKVIDTMTHKTCGFDFSGALEDISRIPEQSVLLLHACAHNPMGVDPRPEKWKEMVSVVKKKSLFAFFDMAYQGFASGDGDKDAWAVQHFIEQGINVCLCQSYAKNMGLYGERVGSFTVVCKDEEEAKRVESQLKILIRPLYSSPPLNGARIAATILTSPDLRKQWLQEVKGMADRIISKRTQLISNLKKEGLFHNWQHITDQIGMFFYMIKDGRISVAGVTSGNVCYLTHAIHQVTK", "length": 379 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GL73-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC134481331", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLVSLPEQNLAMARILLLFLSAACLHTGNSSGYRRVNDFGVNQPAVLSGVQSGSIEIPFSFYFPWELANDRSMSIAWIWKYFHGEVIYNSTQPFLHEHFKGRLIMNWTQGQTSGVLRILNLKENDQARYFSRVFLRTTEGMKSWQSIPGTQLIIHALNTTMGSPSIIPSAVPTAGLEDKRGQRNPSLLNLGVMVGMVLAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GLF3-1", "protein_name": "Heat shock protein 90 alpha family class B member 1, pseudogene 13", "gene_name": "Hsp90ab1-ps13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEEVHHGEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLWELISNASDALDKIRYESQTDPSKLDSGKELKIDIIPNPQERMLTLVDTGIGMTKADLINNLGTIAKSEDQTEYLEERRVKEVVEKHLQFIGYPITLYLEKEREKEISADEAEEEKREKEEEDKEDEEKPKIEDVGSDEEDESSKDKKKKTKTIKEKSIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNAWEDHLAMTSLSGYVSRMKETQKPIYYISGESKEQVANSAFVERVWKRGFEVVNMTEPIDDYCVQQLKEFNGKSLVSVTKEGLELPEDEEEKKKMEESQTKFENLCKLMKEILDKKVEKVTIPSRLVSSPCCIVTSTCGWTANMERIMKARALRDNSTMEYVMAKKHLDINPDHPMVETLRQKAEADTNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNCIYCMIKLGLGIDEDEVTAEELSAAVREEIPPWRVMRMPLAWKKWIKGSWEAPALCIVSLGLPQQP", "length": 518 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GM54-1", "protein_name": "MAGE domain-containing protein", "gene_name": "Mageb11l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPHDQKSKLHSRENSYQAGGGAQAYGDAEEIAEAAAEAAEESSAKSQSQPGAEYSRNHRAPPKAKPSAKLILSSSSSESDESSHEESEPSVQKDRPFLHQDLIERRVAILLQYLLHNYNLKQLTTKEEMLKVITKKYEKDFPEILRKASEKLEDAFAVEVREVSSSQPSYDLISKLKLPNNGRIRAGKGLPKTGFLMSILGIIFIQGNSASEEDIWKILKKKRIYPGKKHRVFGEPRKLMTQYLVKLKYLEYRQVAHSDPPRYEFLWGPQAHAETSKMKVLEYLAKINKTTPHAISALYQEALKDEKERAEVRDEDNTDTTDQSTEGSPEKSPTASTTPVDT", "length": 342 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8J8YII4-1", "protein_name": "Coiled-coil domain containing 188", "gene_name": "Ccdc188", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEGPEPLGPCGHSHTQHPPAPVSNNHGGCLNQPCQGFVRWPCLVPLQSTQSLESSRPFPAPGTGSGGPRMRGEAPGMFLSSEGEIPRQRAREPAGARQEEVEVEWDWPLHPGHEQGPPRQTAPPTSGPRPCPCPTLPPRGRATASSRQAPTQLQGGTLESAQQSFLQLEQENHSLKRQNQDLREQLGALLGPGQQFLPLCSEHSSCTALAWVSGNTRSRTHAAAPPAVHSLGPDPGALPQSPESARTRLLEDRAPVQLLRQQELCPGKESFVRQSQSELQQIRLSFERKKMAITEVWDGVAEVHMALNNQATGLLNLKKDIRGVLEQMEDIQLEILGERAQCRTQARKQQQMMEAAGLEAAAGCSAGLHSGLRVRGGPHTLRGAGATPAEPSQRLEAQGLTGSLLTPGGGRLPAFLEQKPSGPSKEARWLVLPQGLRGLTGPCLQHCGTWPLPEAAEKGGGRASPEGWACSWIYSHDTLCM", "length": 481 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8M9PVG7-1", "protein_name": "5-hydroxytryptamine receptor 7", "gene_name": "htr7a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLGDTNRTIIAKSHGETMKSLMAEERARETGASVETFNGIMISEVLVPRLFKIAHESGEVAVAAGSGSMDMKPSSSPILLEMMEVANGTRCAEQILSYGEVEKVLIGGVLTMLTLITICGNMLVVISVCFVKKLRQPSNYLIVSLALADLSVALAVMPFVSITDLIGGRWIFGKFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGWCMAKMVLSVWLLSASITLPPLFGWAQNVNDDRVCLISQDFGYTIYSTAVAFYIPMTVMLVMYYRIFRAAKLSAAKHTITGFPRVEQEEVEEDEVEEDGGDGAEEPTGVDCVTVAIKLQREVEECARLPRILRGVGRRCSDRRSISIFKREQKAAATLGIVVGAFTICWLPFFLLSTARPFICGTECSCIPLWVERTLLWLGYANSLINPFIYAFFNRDLRTTYRSLLSCRYRNINRRLSAAGMHEALRLVERPEVVVSG", "length": 479 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M9QGZ8-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "pimr118", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLFTVLGVIALFLRERDTNNTEEEVQNDVPPVRNSDGQEIDDWCKEPSLLEPVSVHSEEPSLEEPVSAHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLKEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPSLDLSFFSAESSWSEDLSSSFLTVESSWSDDLSSGFLTAESGCGDDEPLFVDSAEPEKLKEDKETQIIEINSHCYAIEAQLGEGGCGAVFSATRLEDGLQVAVKLSDFEEEKRFISVDGFEDPLPLEIALHFLANKGPKVKEIIELLDWKVEADRYFMVLEQPIPCMSLHEFLLDCEGIIPENKLRTIMYQTTVAAQTCCQRGVLHRDIKLENLLINPDTLEVKLIDFGCGDLLTEDSFQYFRGTREYFPPEFSSTGRYHGEPATVWSLGVVLFLLVFYRFPEQSDLPRMNNRRLRIKGLSRDCCDFFHGCLQLDPKDRLELQNLSSHKWIRTRTRRNDENCPNLTDGSSHSNHPITSN", "length": 567 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8V0WZU8-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6B2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMVVNLILGWWLVAVSRAQKLPRPSLSLHPSQGASLGDNVTLRCHLPQPAAWVRLYRYQNPTYIEQKDNVQDMAEFSLTSIKQEDAVIYQCQYQGLAPAGTSQKSDPMELLVTDHRYPPPGISLSPKEHVEMGSNITIQCWNKDYGASFLLHKGGHSAPIQHQEPDYWGTATFTLFGVTPADSGTYRCSYRIGGCCLLFSPLGDNVTLEVIPRPAPPGVNGGPSRNLVAAVAGGCAAAIVIITVSFLLVALRRQMQRAERPGATPRSPEAVQFQVSPGDSEGLTYAQLQAVTPSTHPPTSSTTPEPPIIYAEVGTRGPR", "length": 321 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEA0-1", "protein_name": "C-type lectin like 8, MHCY region", "gene_name": "YLEC8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 276 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XED4-1", "protein_name": "C-type lectin like 18, MHCY region", "gene_name": "YLEC50", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYLSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKAHPQ", "length": 276 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEJ6-1", "protein_name": "Sulfotransferase", "gene_name": "LOC769841", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVCRAAAPNSHPSTMPVHYVTYKGIKFPPAYNSVHSLSFAHNEFLVRDDDVFNITYPKSGTVWMTEILSLIRSHGHPSWNQTVLNSDRMPWFSTRLGLEAALSYPSPRLLTCHLPRHIFPKSFSHSTAKVIYTLRDPRDVVVSYFYFCKMCNSYEDPVSFEQFLRDFLSGELPHGSWFEHVRGWMQMKDRENFFFITYEELKQDLQGSVRRLCHFLGQNLDDDAISSVVQNASFMAMRQNPMCSSILLPADIMDQTKGQFLRKGICGDWKNHFTVAQTETFNRIYLEKMRGLNVAFPWDRDQDPDLTEQ", "length": 309 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGU1-1", "protein_name": "C-type lectin domain-containing protein", "gene_name": "YLEC62", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTGSDPQLPEEDVHISVLESNTSTPAMGEGDQQETFLEHKAVTEPLGQSGEKPQWGSRCHGTGRRRSRVQLIAVHAAVGALILMLVVLVISTVCRRASIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCNAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 277 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGW1-1", "protein_name": "NHL repeat-containing protein 3", "gene_name": "NHLRC3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAPAVLWRLQRLSAAERLEARLSGAVRKEPGRGEARQSEKKPHSPHCPLRCSYACPGRTPMTSESGRKALSHLGRQQQCLNKMAELRARLEAFPAPECLFKTLNPFMGFLRLFFAPQPLGGEQALFRAAQCAEASPRIPAPQAWAGRSRGCHGNAARPASMGRKQAVGPRLVMAGALLTLLGLLWGSQMLKAFDYFSSWKGDGEQQMYKLDISWPKIPEYFSGQTFCVAVDSLHGLVYVGQRGDDIPKVLVFSVEGYFLYSWNDTVEMPHGIFVLNTATDSSVWITDVGSGKYGHTVKQYSPSGKLLQVLGTPGNAGSSLNPLQFDQPAEIFVEESGEMYIVDGDGGMNNRLLKLSQDYKEIWLSGENGTGIGQFKIPHSVTVDPFGRVWVADRDNRRIQVFDKVTGEWLGAWSSCFLEDGPYSVRFTGNYKYLIVAHLNINRLAILAAPPVGEIGDCAIVSTIQLADETKPHLVDVDVKSGAIYIAEIGAQQVQRFVPLS", "length": 502 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPN1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR2A13", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMAVALILGWWLVAASRAQQLPRPSLSLHPSQGVSLGDNVTLRCHLPRPAAWVWLYLEGRWSYAKYIDKKQDTTEFSFLSASHDQAGTYLCQYQVSESEDVSVTSDPVKLVLTDRSFPPPHISLHPEERVGTGTNVTICCWNKDYGATFLLHKDGRSDPIQRLVPDDVGAVSFTLFGVTPADSGTYRCSYHPKNYPFLSSPLGDSVTLEVTPTPAPPGAELVSRGNLVVAVVRGCAAALIFGLGVFFVIDARSLWIRRDESLGGEGI", "length": 269 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPP6-1", "protein_name": "SUN domain-containing protein", "gene_name": "LOC776146", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDETGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XQE0-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6A8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEPMAVNLILGWWLVAGSRAQQLPRPSLSLHPSRGVSLGNLVTLRCHLPRLAAWVWLYRGGGWSYKKGKKKEQDAAEFSFASTLREHAGRYRCQYRVYESAEVSVESDPVELVLTDVRYPPSSISLQPEQHVGTGTSVTIHCWNKDYGATFFLHKDGSSDPLQRQDSSGGGTATFTLFGVTPADSGTYRCSYRHWRYAFMSSPLGDSVMLEVTPTPAPPGAELVSRGNLVVAVVRGCAAVLIFALGVFFVIDARSLWIGRDESLGGKGI", "length": 269 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XTD2-1", "protein_name": "Coiled-coil domain containing 97", "gene_name": "CCDC97", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKEDPKEAEGPTASKWIPIASNGNPTASKWIPIASNGDPTAPKWVPISSNGDPNWVPISSNRDPMASKWIPVSSDRDPTVTKENPPSSNETPAAEWDPKVPPEGRPVEEGDPKASPTEDPPAEPDPKASNCAPLSSHWAPEAAVWDPTSPHRDPTAEPQCSASPEQHRAAQRDPASPMEEDRYPATHGVRPATRADPAPYGDHPEAEEDPLPAAVEAMLAAVAASPVRVRSQQQGDPELTAAERRRDLRALFLRKPLVFLERFHGALQAEHLPCFAHLPPRYEVAFYCRQVRARRQQNPQTGLSRWPRRPGARTRLRNRRYAALRQLIAGGEYFSEEEMRAREPLLYEHYIGQYRDAETPPGTPPCPPHPGTPPGTTWAAALLRSVEEAAVQQRLQRQRLREGDSGEEDEDEDEAEEPHIPDAGELEVLREEFRSRMYQRFLDGEDRDFDYSQVDENPDMDNLDIESRDAEERYFDEEEPSAAPQLE", "length": 487 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Y889-1", "protein_name": "Transmembrane protein 65", "gene_name": "TMEM65", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWLGRAVLLLGRPGGPAAPSSSSRLCSLRGPPRCCCRRRLSSLRGGADGLLPARGAPPGRALGTHPKKEPMEALNTAQGARDFIYSLHSTERSCLLRELHRFESIAIAQDPIAARASCQQYGETWAHQEPSGACSSVHSQAYHQKEAVPSSNCPSTKYDRTHYLWPPLMAEAAGKPGRCPHCCAEGWSSEKLEVAPPSPGQLRHVFFHNALPFVGFGFLDNAIMIAAGTQIELSIGVVLGISTMAAAALGNLVSDLAGLGLAGYVEALASRLGLSIPDLTPKQADMWQTRLSAHLGKAIGVTVGCILGMFPLLFFGDEEEKLEEKN", "length": 328 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YA34-1", "protein_name": "SWIM-type domain-containing protein", "gene_name": "LOC100859602", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAERGQLPPYAKRLCCRPGYGSGCRLGQQAGDTGPGSGTFCAGPSSAAAAAAAAAAATAASLVLLPLGKTQSPESLLDIAARKVAEKWPFQRVEEQFERIPEPVQRRIVYWSFPRSEREICMYSSFDTGAEGFTAPGSAAGNTASGGAVDAVADENRLPFRRGMALLDGGCVDNVLQVGFHLSGTVTEPAMQSEPETVFNVAISFDRCKITSVTCSCGNKDIFYCAHVVALSLYRIRKPDQVKLHLPISETLFQMNRDQLQKFVQYLITVHHTEVLPTAQKLADEILSQNSEISQVHGAPDPTAGASIDDENCWHLDEEQVQEQVKLFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITDQFMADPRLLLWRQQGTAMTDKYRQLWDELGALWMCIVLNPHCKLEQKTSWLKQLKKWNCVDVCPWEDGNHGNELPNLTNALPQGANANQDSSNRPHRTVFTRAIEACDLHWQDSHLLHIISSDLYTNYCYHDDTESSLFDSHGWPLWHEHVPTACARVDALRSHGYSREALRLAIAIVNTLRRQQQKQLEMFQARKKELLYRGITSITNLEGWVGHPLDPIGTLFSSLMEACRVDDDNFHGFSDFMENTSQHKSLEYQHLPAHKFLEEGESYLMLAVEVALIGLGQQRIMPDGLYAQEKVCRNEEQLISKLQEIELDDTLVKIFRKQAVFLLEAGPYSGLGEVIHRESVPMHTFAKYLFTSLLPHDAELAYKITLRAMRLLVLESTAPSGDMSHPHHIASIVPNRYPRWFNLSHIESQQCELASTMLSAAKGDVQRLETVLQSIQKNIHSSSHIFKLAQDAFKIATLTDSLPDITLLKVSLELGLQVMRMTLSTLNWRRREMVRWLVTCATELGVHALDSIMQNWFTLFTPTEATSIVATTVMSNSTIVRLHLDCLQQEKLAGSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAATTGMSYSQLFTIARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACALSHSLGKNELAAIIPLVVKSVKCATVLSDILRRCTLTTPGMVGLQGRRNSVKLMSLDKAPLRQLLDATIGAYINTTHSRLTHISPRHYGEFIEFLSKARETFLMSHDGQIQFTQFINNLKQIYKGKKKLMMLVRERFG", "length": 1168 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YDY5-1", "protein_name": "SKA complex subunit 1", "gene_name": "SKA1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEAEGLEALSRHLAAKIGLIKRLLQLRGLGRREMLAEVGMEVAVLHGLLGRMEEEVNQRRQLAAALQEMRKRAEKEKWEAERLQLVKKAAKEAPLVNDAPLISDEEFESVPGYMRGRLTLAQTNAALRALHAAAASKYRLLRHPPKSLPSSSRALCHRFREEETKETQGLTFVVEADLKEFTQLKVDRTFHRIVGVLRHCRRLREVRGARLVRYVLP", "length": 217 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Z0M2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 10", "gene_name": "TNFSF10", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLPAGGPSPAHTCGAVLVAAVLLQSVCVAVTYIYFTNELKQFANADLVHSCERGHPLSPPPPPDVPQTAVTRPTKAEGGAAPVGASCSIGQSRRAQSDLRQRAANAASPQHGPPCAARSRARCSCPRCTAGPRVCRRTQQKLWDTYSRSGTACLTGEELGDLIQNLDVVESKDRVADPCWQVKWHLGKLIKKMMSRILQENMSAINGDRTQALPRRDEPPQGPTLRIAAHLTGSSKRSSASPHIDYLSYRGIGHKIHSWESSRRGHSFLYNVELWNGELVVPQTGFYYIYSQTYFRFRENEDEDSGLLERIKNPKQLVQYIYKLTNYPDPILLMKSARTSCWSKKAEYGLYSIYQGGVFQLKREDRIFVSVSNSDIVDMDKEASFFGAFMIS", "length": 392 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZCD9-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418390", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMSALLFTLLHYWKIWFCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEREEQQEQVEEEEQLERVEELEQEDQVEHVEQEEQEEREDQGEQVQQEEQVEEVEQEDEEEEYFHHSALTRYIARRAWEKMQGKATKCVLVEELMSDLLQTYTFVCSNSFYPVLQPAIGVGSAFEGWSPCEEDIVYRLLVPIKAPHGHVFHPELGEEGEVLARNSRIRVELVCMCTREQQLGDVLCFLHHSEEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRTWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKVLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRVLRDFKELKDRLFRLLLFGR", "length": 542 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZD85-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418382", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAIFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZE07-1", "protein_name": "LIM domain only 1", "gene_name": "LIMO1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVLDKEDGVPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRDSNPMGWYGSHPVTAAWEAEARTTSLGQPGVRAAELP", "length": 158 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZGC1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "LOC124416945", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVAGSPALLLLLSLGLCFTGAQGQGNTMAVSFLNRSMKHPKEGQRLGLECHTYKTSWGVSWIRLDKDGNLHFIVYISKFSSTTFPGNKGASSQFEVSKQGSSYRLTVKNFRAQDQGIYFCIANINQVLHFSSGQRAFFPVTTTTAAPTTLRAVTLTATTQSSQVTMKDISQHSPDPGRSKENMPNFCCKLVMWVNLACACLLLLTAITITTTHCQRPSSP", "length": 220 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZPB4-1", "protein_name": "trypsin", "gene_name": "LOC107049069", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKFLVLVAFVGVAVAFPIRDEDDDKIVGGYSCARSAAPYQVSLNSGCHFCGGSLISSQWVLSAAHCYKSSIQVKLGEYNLAAQDGSEQTISSSKVIRHSGYNANTLNNDTMLIKLSKAATLNSYVNTVPLPTSCVTAGTTCLISGWGNTLSSGSLYPDVLQCLNAPVLSSSQCSSAYPGRITSNMICIGYLNGGKDSCQGDSGGPVVCNGQLQGIVSWGFGCAQKGYPGVYTKVCNYVSWIKTTMSSN", "length": 248 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A1Z3-1", "protein_name": "Bridging integrator 2", "gene_name": "BIN2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPSLYHPNAIPVPFPSHPCTTLMSSLTHHIIPVPSSCLPNVIPIPYHPHVISTLSLLHPHFIPMAFLNLPHAIPVPPLIHSCAVPMSYHPFPISFSFPSPSHPSIAPMQSPSYPYPTPVPPPFHLLPIPIPTPVPPPCHSCSIPIQPRCRLHAILVPFPPHCHPHPVPAPSPPHPSAIPMPSHFHPHPIPVPPHTISIPSPPQCHLHAIPVPSPTHPHPIPSHPRFPHPLWAQGHPHPRGSNLSPPIPPPPPNTFALQNEGNKLYKDLKAFVGAVKVMHESSRKVAETLQEIYSTEWDGHVELKAIADSNDLLWDDYEAKLGDQALRLMENYLAQFGDIKERIAKRGRKLVDYDSARHHLEALQNAKKKDEAKIAKAEEEFNRAQAVFEELNRELREELPVLYGSRIACYVTIFQNISNLRDIFYKEMSKLNRDLYEVMGKLDKQHSSKVFIIKGVPSKRRSLLISAPVSPPAAYPCPGKAPNWDPSSGAEQTPTSPRVGSDATEDVPNGLAAPGPAEPGAPMPGPPPASPTSVRSASESESECSEESREIDLSPKEMEVSVGSGCPEYPKTEGAAKGEVEGIAASMASMIVSEAIAAATGAAPGDSDGVGGGDSTDSEISPAEGAWGGPSPGGSEERVEGTDVSPEVGSDAGPCEHGTPEPPQQDVSCDPPQDPSESLTPL", "length": 682 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A7J1-1", "protein_name": "Mitochondrial transcription termination factor 4", "gene_name": "MTERF4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAGRLLGLLRARAPRAVLPAPGPASRHRCGTAGPEEGEAAELLAMGFSQAQARRLRLLRPGLEPQRRAEAAAQLLLLGLSAEAALGLLERSPGLLRMETARLKERAEYLRRLGLEGERGGPLPRGVHAAPAEDGGGGAAAAGAVSVHGRAADRAAAELPRGAAGGAGPRAAPLPGAGRRAGRSGGVAGAARPALSSARLHAQYAYFRMGVRQKEMVKARLFRTPFAELRNRHVFLERRGLYRTPHKGQSQSGNPALRDVLRPTEGDFVAGVARASPDEYEVFKRLLAREEEEMEEEEEEDEEEEEEEEGSAALHAEGGDRDWHSSEPSPIAPCPPAPQ", "length": 338 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AKD9-1", "protein_name": "Borealin", "gene_name": "LOC121107214", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPARRKAAAGARGRKLSAFLKDFDREVRSRVEQLRTNGERLVKEMENLYDVELLRLPAALREMNWLEFFAKGGSQKVVEEAVTADLGITEINKLTAELIQTPLKIVTKEKSKQGIEATEEAAEVPLLPPAKKAKHDSQLLLEQAAASTNPRNGKVRTSTKKAPVSRSRRAPSARVKRVSKRSSKSSFITPATGRNLDLCARGGASIVTPRFDSRVFKTPGLRTPAVNERVYTISANGSPLADGNDVFITVPVGGGESIRLTASDLTKKNLLHLNPEARGIMKKLSVRLAQACSSAKTHR", "length": 300 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AMC7-1", "protein_name": "ODF3A protein", "gene_name": "LOC121107218", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPVTKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8W4F7J1-1", "protein_name": "40S ribosomal protein S26", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQPIHCTNCARCMPKDKAIEKFIIRNIVEAAAVGVISEVSVFAAYVLPKLYAKRHYCESCAIHSKVIRNRSREAQKVRTPPPRFRPTGAALRPPPKCM", "length": 98 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F8K9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTVTTFILLGLTDEPQLKTLVFIFLFLTYMLSVTGNIISLTSTDSHLKTAMYFFLQNFSFLEIAFTSACIPKYLYNIATGDKTITYNSCATQLFFTDLFAVTEFFLLATMSYDRYVAICKPLHYVTIVNHTVCRRLIFGSWLAGLLIIIPPLSLGLKLEFCDSNVIDHFVCDAAPLLKISCSETWLIEQMVIVCAVLTFIMTLMCVVLSYVHILKTILQFPSAQQRKKAFSTCSSHMIMVSISYGSCIFIYVKPSPKDSLAVNKGVTILTTSIAPMLNPFIYTLRNKQVKQAFNDAIKRIALFSKN", "length": 309 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F9E2-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RLEFSSLSPAEVPLVAAAGGRGAFDMRCHECDTKNTFACDHIVTCPRGIRRCLTLSIRLSSREIYVYKGCTRNCTFIYADEQPPPGERKPPRSNSLYFVQCCNAITCNRGGPINLEKDITPPLILEEELGGTVRLGEATLFLSVASVLVSHALT", "length": 154 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBC5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLTHSFSFFSSSSSSSTYSSSYPLLPLLLQPQNQFRIWALKDYGQRNSTSLHDFILLGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSTAGQRKAINTCGSHLTVVSIFYGAIIYLYLQPGNSASKDQGKFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 331 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBS2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258626", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTAITTFILLGLTEDPQLQLLLFLFLFLTYILSVAGNLTIITLTLLDPHLKTPMYFFLQNFSLLEISFTTACIPRFLYSISTGDRTITYNTCFTQLFLTDLFVITEFFLLATMAYDRYVAICKPLHYMTIMSNKLCKTMVVCCWLAALLIILPPFSLCFHLEFCDSNLIDHFACDASPLLKISCSDTWLIEQMVIACAVLTFIITLVGVVLSYIYIIRTILKFPSAQQRKKAFSTCSSHMIVVSITYGSCIFIYINPSAKEEVNLNKSVSLLISPISPVLNPFIYTLRNKQVKQALHDSLKKTAFLLRK", "length": 312 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FCJ2-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSRKRNLPQCNPPKKQALSRSSRAELQFPVSRVDRYLREGRYAQRLSSHTPVFLAGVLEYLTANILELAAGEAHSSRKMRIAPEHVQRARSHNETLSSLFQASSVSRGAEEEAEEPLPEAGR", "length": 122 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FD42-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFIILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLNCCITQLFFIHSIFVFESGLLLVMAFDRYVAICYPLRYTTILTHPLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLLLDILLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVCIIILFYGPGIFTALTQRFGRHIPAHIHILLANVCILVPPMLNPIIYGIKTKAIQEQVALILFPKYR", "length": 314 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FH98-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VCHYGNYYSGLSCSCGYGCGYSRCGCNCDYDKCGYRCGYGGYVYGCCHLSCCGRYRPYGFY", "length": 61 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FHY5-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "DTGSCGAIVLTQTPLSLSVSPGEPASISCRSSQSLEEYGKNWLSWYQQKPGQSPRLLIYQATNRASWVPERFSGSGSGTDFTLKISRVEAEDAGVYYCQQYKEFPPTVIQPLTQTPLLGAQLHTWLCVVWGAEGQKL", "length": 137 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FIZ4-1", "protein_name": "Envelope glycoprotein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRPTLSRRHLPTRGGEPKRLRIPLSFASITWFLTLTITPQASSKRLVDSLTSPKPLSLTWLLTDSSTGITINSTQREAPLGTWWPELHVCLRLVIPGLNTMSTPPDILRAYGFYVCPGPPNNEEYCGNPRDFFCKKWSCVTSNDGYWKWPTSRQDRVTFSFVNSYTSYNQFNYGHGRWKDWQRQTQNRQISCSPSDLDYLKISFTEKGKRENIQKWINGMSWGVVYYRGSWGGEGSILTIRLRIETQMEPPVAVGPNKVLTEQGPPIQGQRPSPNPSDFNTTSG", "length": 284 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJ61-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSTKNKHLMKGSKKGPKKKVADPFSKKDWYDGKAPAMLTKKRNIRKTLVTGTQRTKITSDGLKGHVFSSEPCQSAE", "length": 77 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJT7-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKNPEVRKIHSAVFLITYLSTILGNLLIVVTMVTSQSLRSPMYFFLTSLSLMYVTYSSVIAPKMIVDSFSETTAISLEGCMAQLFAEHFFGGVGIILIIVMAYDHYVVCCLLLGGAWVGGSIHATIQLLFICQTPFCGPNVIDCFMCDLFTLLKLACMDTHLLGILVILNSGVMCMAIILILITSYVVILCSLKSYSFEGQHKALSTCGSHLIVVVLFFVPCIFLYVMPVATYPIDKAMAVSFTIVAPMLNPLTCTLRNAEVNNAMRKLWMKQNTLCYH", "length": 279 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKQ6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVQDQDEKKNPMWELGIHKLCLNICEGESGNRLTRAAEVLKQLTGQSPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEIFERHLRVREYKVQEHISLGTKYDPSIGIYSLDFYVVLGRPGFSFADKKHRTGCIGAKHGISKEDAMSWFQQKYDEIILPGK", "length": 163 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKY3-1", "protein_name": "Large ribosomal subunit protein eL27", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGKFVKPGKVVLVLAGRYSGRKAVIVKNTDDGTSDQPYSHALVAGIDRYPRKVTAAMGKKKIAKSSKIQSFVKYSVDIPLHKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKCFFQKLRF", "length": 125 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FLM5-1", "protein_name": "Small ribosomal subunit protein uS14", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGHQQLYWSHLRKFGQGSRSCCVCSNWHGLIRKYSLDMCHQRFCQHMKDPGFIRLD", "length": 56 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FNC8-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLTNYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIALISASYVFILHSVIRMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 301 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP10-1", "protein_name": "Ribosomal protein L19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSVLRLQKRLASSVLRCGKKKVWLDPDETREIANAKSRQQIWKLIKDGLSIQKPGTVHSRARCQKNTLRKGTASAGMPKKSVPERDGNVFKNKRILMEHTHQLKADKARKKLLADQPEARRSKTKEARKRRQERLQAKKEERNRTEVETKFCRLI", "length": 155 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP36-1", "protein_name": "Small ribosomal subunit protein eS24", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQDTASIRTRKFRTNQLLPGKQRVIRVLHPGKATVPKTEIWGKLAKMNKRTPDVIFVFGFRTHFGGGKTTGFGMSHDSLDDYTKTNEPKHKRARHGLYEKSKTSRKQRKERKNRMKKVGGTAKANAGAGQKGGV", "length": 134 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FQE1-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQLFFIHSIFIFESGLLLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDVLLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVSVIILFYGPGFFTTLTQRFGRHIPAHIHILLANVCVLVPPMLNPIIYGIKTKAIREQVAHLLFPKQK", "length": 314 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A9J7F7T0-1", "protein_name": "Protein transport protein Sec61 subunit gamma", "gene_name": "LOC100757015", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDYVMQFVEPSGQFVKDSIWLVKRCTKLDRKEFQKVAMSTAMVFAIMGFTGFVKLIHIPVNNIIVGG", "length": 67 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GY23-1", "protein_name": "Tetratricopeptide repeat protein 16 isoform X2", "gene_name": "Ttc16", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTDSSTEESVNVQTQKIPKLQVPETRETTLQRIFGTSQVFYSVSGVVKPRLTESTVPFRVREYYHQGHHCLEQEDWEMAVLYFSRALHLNPDQVEFYIFRAEAFIQLCDFSSALQNLRRAYSYEPENSKYLERLAFVLYLQGQCLYELCDFQEALYVFLQASDLQPQNPSFSYRCMACLLALNRHQDCLSLVTREVKQGRATADVYILRARIYNFFQKPKLCYQDLRSALLFNPKHPQAKGLLQVMVDQAKKSLQDASILAVQGKLHRALKRISCAIENNPLDPNLFLFRGTLHRRLQQFDPAVEDFLKAMDMVTDSQDNLVQKTQRQLLLTYNDFAVHCYTQGAYQEGVLLLNKAIRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQALELCPKDEGANLRMGVLQEKMGLCEQTRRQFQKAEDHFSAAIKYNPVNAQYYLHRAKNRQLLQNIVGACQDIATVLLLNPKYPKMAPLMAKLFPGMSVEEVLNSHVAQLAKLQLRRMIESGPKASHPQSIVAKRLIERQKAQALMESWNWEQLFTRNPEEEVAPSESLQGKTLREKIEFKREVVEEKKVKILRKVTSLSDSYVDQTSSGSEFSILSPSTLETEVSTMEYKSTSNTAASSAERLLPQYLVTTKYKESLGLSMAPNVTQVSEDLHKSLTENIPDDGPRHHSSKAEATQRPKPRKTEPSQSLGKQRPSQRPSITEATKGPKPRKNRPALSPRQRLRRAKAVQAQNWKPRTNSNSQKTSSLLSNIAVIISSSNEAQDQSPVPSKADDISSYNDSTATSSTNTDSLRLSIHLSKPKYSKDQSPSHNKEEVSPTSNNYAAP", "length": 835 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GZF8-1", "protein_name": "Protein EURL homolog isoform X2", "gene_name": "C4H21orf91", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MIIKRKATVIHHKGTMNEEEQFVNIDLNDDNICSVCKLGTDKETLSFCHICFELNLEGVPKSNLLHTRSLRGHKDCFEKYHLIANQDCSRSKLSKSTYEGVKTLLTKKINWIVQYAQNKDMDLDSECSKNTRHHLFNFRHKPDKKLLPQFDSQVPKYSVKGIAGSTGGLSSYTQRILEQRENTDFGLAILQDSDALWPHKHNQAQKKEETSSGPENVQTQNPRYSREELNSMTLDEVEQLNTKLQQQIQEVFEELTHQVQEKDSLASELHVRHVAIEQLLKNYSKLPCLQVGRAGPRSHLPINN", "length": 304 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7JMJ4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100771730", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDFVNISLVTEFFLVGLTDQPELQMPLFFLFLAVYLITALGNLCLIILTVLNSNLHTPMYFFLFNLSFIDICYCSVFTPQMLMNFILRENIISYMECMAQVFFFCFFVVSECYVLTSMAYDRYMAIYNPLLYNVVMSPNLCLNLMFGSYFIGFSNAVAHTVCMLRLTFCDTNIINHYFCDIPPLLQLSCTSTYVNKLVIFVFASINIIVPTSTILVSYGFILSSIFHISSSEGRSKAFSTCSSHIIAVSLFFGSGALVYFKPSSAVYMNEGKISSVFYTNVVPMLNPLIYSLRNKDIKVALMKSLNSRNL", "length": 310 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AA74KSW7-1", "protein_name": "Predicted gene 3002", "gene_name": "Gm3002", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLNSSKLGVWAAGVPPSSPTLLFRRWVMKVESLISQPMTSGKNELQDHLIFISEKALHKRLFQKENGDEGVTRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSPAESRTWHRPGHDLPQREVLEEEH", "length": 280 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0AAA9RU54-1", "protein_name": "Small integral membrane protein 17", "gene_name": "SMIM17", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MQSLRPEQVRGLLEPERAKTLLPRENKAWEKRAAFAKDWVAVEVGASGCGSDEKDLPSPKTLVPQEWSSVEEDDESEDSQPHWAAALPTSPSCPSQDTGTGSGADLCLQCSSPRTPPWLPWAFSHTIESALPTPPRAWLWSLL", "length": 143 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0AAA9RY85-1", "protein_name": "Core Histone H2A/H2B/H3 domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNMPEPAKSAPAPKKGSKKAVTKAQKKDSKKRKRSRKESYSVYVYKVLKQVHPDTGISSKALGIMNSFLNDIFERITGKTSRLVHYNKRSTITSREIQTTVRLLLPGELAKHAESEGTKAVTSIPALSKYNMPSRC", "length": 136 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0ABK0KVZ2-1", "protein_name": "Eukaryotic translation initiation factor 1", "gene_name": "Eif1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EFGFRSVASAGWGAACPLGLRHVISCGGRAGLEQKARALSSSSTGLFPEGQQRAPPDFSDDICTDKKKNQERGINKWPTTTRNKNYFFVDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLIEIGLAKDDQLKVHGF", "length": 192 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0L002-1", "protein_name": "Oocyte specific homeobox 2 like 1", "gene_name": "Obox2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ILQSVQNTDMIEGPSFLPKFQMSSYTPMDTSSQLPQEPSWNLAFQMGQSPLVTSRTPMQSSPSVPEQNLNWQESQGSSRESSIQMQPGPVMDPGFPTLRSPSGHPSHQRPSRPSSRSGFHVPIEPMALSDKHGGKQTGPVAPRKCRKERTQYSAKQKSVLQEHFAECQYPDKKLCLELATLFGVTENEIKVWFKNNRAKCKQKNVPEALPETNGGPEAVSWSTDFPGSIAVVGCDQGEPMATAILDVDSTPKLNCSQESSLDGNWTYDGAMCCLPEDVLDGNDPVTAGDSGESAPVEAQSDLAAAGAPVAMAVDTQNPEECEDLPLLDEGVWQWMLEDFHQLEDWFTKNYIESPSSASHPLD", "length": 362 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LHI6-1", "protein_name": "CD27 antigen", "gene_name": "Cd27", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAWPPLYWLCMLGTLVGLLATPAPNNCPDRHYWIGAGLCCQMCGPGTFLVKHCDQDRAAAQCDPCIPGTSFSPDYHTRPHCESCRHCNSGFLIRNCTVTANAECTCSKGWQCRDQECTECDPPLNPALTSQPSEAPSPQLPPPTHLPYATEKPSWPPQRQLPDSTVYSRLPSQRPLCSSDCIRIFVTFSSMLLVFVLGGILFFHQRRNHGPNEDSQAVPEELCPYSCPREEEGSVIPIQEDYRKPEPASYP", "length": 251 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LYA6-1", "protein_name": "Prostate and testis expressed 2", "gene_name": "Pate2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLSCLTSELQGSACLCLPSTGSYKHILQHLDLGTMCYKCKKYHLGLCYGLMRSCTLKHRQSCAAENFYILTNRGQSMYHYSRLSCMTNCEDINFLSFERRTELICCKHSSYCNLPMGL", "length": 118 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0M6C3-1", "protein_name": "Prohibitin", "gene_name": "AABR07037878.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNKNIKNSISISVCVGGVGGVRARAHAHAHTSPHACTRVIHAFVMLEVGPRDFVHIKKAFRGIDVKKPVIFDCRSQPRNVPVVTGSKDLQNVNITLRILFRPVTSQLPRIYTSIGLDYAERVLPSITSEILKSVVARFNAEELITQRELVSKQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAETARFVVEKAEHQKAAAIISAEGDAKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSSSQNITYLPVGPSSVGPSVRQSMFLRLPQ", "length": 286 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0AC58FXL6-1", "protein_name": "Cytochrome P450 2X10.2 isoform X2", "gene_name": "cyp2x10.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSDLRGIYSYMLSTVNSLVRDSSLTNFKKEFCVHAYLLSVCIQYQSSVWSSSRSVTMLTALVLLCLGAFLLYLQLRIRRPKNFPPGPAPVPIFGNLLQLNRISPLKDFDKFAQHYGSIYGIYIGSQPAVVLTGQKMIKEALITQAAEFSGRSNNMMFSHVTGGKGVIMADYGESWREHRRFALTTLRNFGLGKKSMEQRILEEVKHICLLLEESAGKSIDPQHLYHQAASNIIASVIFGSRFNYKDAYFQTLITSVEDLTKITIGPWAMLYEIAPVLRIFPLPFQKAFQYFEQITKHVLKVVEEHKTSRVAGEPRDLIDCYLEEMENKSDHRTSFDESQMVTLLFDLFIAGTETTSNTLRTLTLYLMTYTHIQEQCQREIDEVLGARDHVTYEDRNAMHFVQAVIHEGQRVADIAPLSMFHSAKTDTQLRGYSIPKGTIIIPYLSSSLREEGQWKFPHEFNPQNFLNEKGEFVKNDAFMPFSAGPRVCLGENLARMELFLILVTVLRRFRLVWPKDAGEPDFTYIYGGTQSVKPYRVIVEPRMHGEACKFVD", "length": 552 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58J797-1", "protein_name": "Uncharacterized protein isoform X1", "gene_name": "si:dkey-233e3.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANAKQLLKNSLDELVEAELKEFQWYLINDHRDISKAEMEKADRLKTVDKMVSCFGPKGAVKTTVDILRKINQNELAEELENKHKQGNCMSARAEGAVLETCKSPPFDYTNTSRELKKKLKEDYEKILVGNSQTGHKKYLEDIYTDLYVVENETGGRERQHEVIQMESKHNQQDRPLKCNDMFKVQPDTGRKHRRILTLGIAGVGKTVSVNKFILDWAEGKDNQEIVFIFPLPFRRLNLIKEEKYSLIGLLNKYFFSISGGLSSLPEKQGKVMFIFDGLDEYRFKLNFKKDDGFTDVNKEMTVSEIITNLLKRHLVPSSLMWITSRPAASSLIPRDLIDQVTEVRGFIDEQKEHYFIKNSSPEVARNIIGHIKKSRSLYIMCHIPVFCLISLTVLQPLLGQESNEKTPTTLTGMYINFLLSQKQQMKEKYRNDTESEANACSFDEIVLKLGKLAFKQLQKGQLIFYKTDLEKCGLDVRQGSVFSGLCTRMFQEENHYSGEQVYSFVHLSVQEFIAALYVFFTYKNKKANLFLDSWKKELKWKLSEKPLFKLHTAAVKKTLQSKNGHLDLFLRFLMGLSLESNQSDMKELLPWLKLKTGMIKDTTDYIKKKIEEENSAERTINLFHCLNELNDDFVEELQKSLCSGNLTAQDLSSAQWSGLVFVLLMSEETQEKFELQKYRRSDEALMRLIPVVKNTTRALLQCCNLTAQSCESLSSALQSSNCVLRELDLSNNDLQDSGVNLLSNGLKSPKCKLEILRLSGCMVTEEGCGFLSSALTSNPSHLRELDLSYNHPGDSGLKLLSQKLEDPNYTLNKLNLDHGGEKWFTAGLHKYACFLTLAPNTAHIELRLSEENRRVTRVGERQQYPDHPDRFDHHAHVLCRESVCGRCYWEIEMNAGDRVDIAVSYKSIKRKGRGYECVLGQNAQSWALICYVNRVAFRHNMIETRLPVKLMSRRIGVFVDHSAGTLIFHNIYRDSMSLIHSVQTTFTEPLYPGFWVEYGSSVKLC", "length": 1006 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58JHM1-1", "protein_name": "Phoenix isoform X1", "gene_name": "pho", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDLRSKGDTSVGEVMEADPRAELIFETPPPDVVSSINACFEEIDSALKIRRDPSVHSPPSDSDSESLFITQSVTKVVHTKRRLRSSKKPDSISDDSGYVRERRLSENQQTECEEESRSLRSSRRKRSKWEMYASARKATFPFLMKSLKTQHLPIRKHQILENSEVGGFFKCIKKIKTGSVKMGKVISSHLFQSPISDSSEEEDQNSEHDVISVDKALFVPGYKRGINFKWLPDFIRERRTLENYLSNGVDKEKKTEQIIEYRQRNQHPQRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDLEIAECAENSHEGHKVVIEETQRQTVEEASAHLEHEDDLNCKVVEYRKRKRHPKRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDIESVECAENSHEDHNVVIEETQRQTVEEASAHLEHEDDLNCKNQPDVDQPNESNFIGPPQEGDISTQSDTQQTDSDIGSVDLFSPLNSPKRDDQIPNTTSITANVEENDQDSDVTQIESEGQHVSTFTQETQKCFANEEYDSDETHIDTESLSRFKPRTPNKQFTSTKHPEIPQFRVQSPKPPSRQAETVNVQLSPKHLPLSNVPLSEVPISPCESAIVGRQKTMVETETDSPMFKITGPSFLKRKRKRTKDKNAAADFKQHDTNGDVGQMVSCPGDDITGLKAVPIENIEACGVEHEMAIGEQTEELGLKSKELLEESVLSTVNSVSTKSKREKMKKYKVKECEAVENQLVETSKKAKKKKKDKERIATSYPEENNLTNIQSNEGFDSAELRVKEVNQSSQSLNTDQPTCVQTSEEITGETELKKKTTRHETDDPLYESVGLDVTLASQFDVGLRIDEQQEGLVTEEAERDERLQGKAMKVAKGKKKIQDTSFQVDHDIGLDKQRSDSGAKPANLDLDGLESLTIKKKKKKKKKHKLKEKTDPKLDFDFDHNVQFFQTDRLQTTDSVLLDSTHTNKQKKKKLKCQNDTDQSSDLKQLHVVGSKLQTIDLPKTDKHMERTGVSSSDALLEHMDDRTLGMRENNTIQTDQIEHLQTSEEVTRCSSPRLSSDKKREKTSVHPNLDASSVFQFDGFKANEDQAITQNTTKEKQISSEQLENNLVGPPSQVENIANVNSSVLLDHTHMNTLREGQLKEQTYKELALAFGLKQLCIVVNKLKTTDLPKTNKNMEGTGVGSSDELLKHTDDRTLETRENNTIQTNQIEHLQTSEKVERHSSPRVTRLSFAKKWMKTSVDSNLDASSGSQFDGLNSMAKEDWTFSQNMDLPLKRTKNKQKDKERTGVSSDALLKRMDDRPPEMRKKNTIQTNQIEYLQTSEKVTRRSSPRLTRLSLAKKMEKTSVDPNLDASSGSQFDGLKEASKEDRTAPRNSIEEKQSDAISSEGLENNPAHLVSTNKSDNTSPSSQVDNIVGLQSDANSVLLDHTHTDKQKKKKIKHKLIEQTEKELTSEVEDNVQPFQFIELRAMDLPSKRITNKKLKDRKRTGVSSSDAVLKHIDDGPSDMRENNSIQTDKIEHLQTSEEMTRCPSPRLSSDKKRKKKYVDTNLDASSGFQFNWSNGMAKEYSKNSTNISSLDNMHTSKQKKKKKQKLKEQKNVESVGDNVYSLEPDQFSGLQITEIKTKKKDKKRTKQANVEENDLKGILSNKAFKASQTYQLEHIQTSEEIKGRSPNAASKSAKKKKKKKNETKNPQYESVNLDLSLAKEDRTTTQNHTEETQGDGNAVEHLEMNPAGLIKVSKKKKKRENAGIVQLDNIIGLQSGSSTDVKSSVLSDSTDTNKHKKKKRKTLKEQENVEAEGDDVQSVEPDPFSGLQITEMTTKKKRKHKRCEEQRCLRGVSSHEAFKAPPTNLLQHIQTSEEISQCQSPNVAALENGGSPYQLENITEMQPGNSIDINSSEILYSTCTHKQKWKKLKQQENVEADANDVHSAELNLFSELKISEPTTKKKKHKKCVEKCALKDISSNEGIKAPQTSQLEHVQTSKEITQCQSPNAATLKSEKKKKQKRDETEVPQYLDASSVSQFDDVTRLKKQAKVDRTTTQNSSEETQNDDISSKQLEMNPAHLIKVSKRKKKREKAGSPYKVDKIVGLQSGNFTDVNFSQLSDSKRTDKQKKKKKIKLKEQENAEADVDDVHSVELDQFSGLQITKPTTKKKRKHKRCVEESGLRDISSNEAYKAPQTNQLEHIQTSEEITPFQAPNVAALKSAKKKKKKRDKTVEPQCLDASSVSQFDDVKTRAKEDQTLTPNSSKETQGDDSAVECLETNPAGLMKVSKKKKKRENAASPYKVDNIVGLESGNSADVSSSVPSDSTDTNKHKKKKRKKLKKQEIVEADLQTSEEIIQCQSPNVATLKSVKKKKDETKEHQRLDVSSVSQFDDVSRLKKRAKEDRTTIQNSSEETQSADISSEQLEINPAHLIKVSKRKKKRENGRSPSQVGNIVGLQSGNFTDISSSVLSDSTRTDKQKSKQKKKLKEQENVEADANDFHSAEPDQFSGLQITEMTTKKKKKHKRCVEESGLRDISSNYAFKAPQTNQLEHVQTSEEITQCQSPNVAALKSEKKKKNKRDKTDKPQYLDESSVSQFDDVKKRAKADRTTTHNSSEETQKDNISSECLELNPAHLMKISKRKRENKSLGLLSENTADLNSSSLLDGTDTDKHKKKKRKKLEGQENVEADVDDVHSAEPDQFSELQIPEMTTKKKKKHKRCVEESGLKDISSNEALKALQTNQLEHIETSEEMTIKTVKKEKKKRDATEEPHYKSVDLDVSPTESTTEAKLNPTKHKKKRKQSFSGSHDAHEAPERKRKKDRN", "length": 2809 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0MGZ5-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 1-B", "gene_name": "hs6st1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNDTERNMVERTSKFLLIVVGSVFFMLILYQYVAPGVINFGSPHGYLLGEEDMTIFPTPDPHYVKKYYFPIKDLERKIDFEIKGEDVIVFLHIQKTGGTTFGRHLVQNVRLELPCDCRPGQKKCTCYRPNRKETWLFSRFSTGWSCGLHADWTELTNCVPGVLNKRESKSKKMRKFYYITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQQFMDCPYNLANNRQVRMLADLSLVGCYNLSTVPEKRRSQLLLESAKKNLRDMAFYGLTEFQRKTQYLFERTFHLKFIRPFMQYNSTRAAGVDLDNDTIQRIEELNDLDMKLYDYAKDLFQQRYQYKHMLDRREQRLLRGHASFHSPFREDGAGGEGTARLPTEDYMNHIINGW", "length": 407 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A1EC97-1", "protein_name": "Dual specificity phosphatase 14", "gene_name": "Dusp14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSRGHSTLPRTLMAPRMISEGDIGGIAQITSSLFLGRASVASNRHLLQARGITCVVNATIEIPNFNWPQFEYVKVPLADIPHAPIRLYFDTVADKIHSVSKKHGATLVHCAAGVSRSATLCIAYLMKFHNLCLLEAYNWVKARRPVIRPNLGFWRQLIDYESQLFGKSSVKMVQTPYGIIPDVYEKESRHLMPYWGI", "length": 198 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A1XQX2-1", "protein_name": "Neurexin-1b", "gene_name": "nrxn1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMILHLGAHLLFIGLIVCKANAGSSLRFTGSDEQWVAFPMWNACCESEMSFSVKTTHLNGLLVYFDDEGFCDFLELHVHVGKLRLCFSIFCAESTCVLSDVAINDNRWHSVSIMRNFRNTTLIVDDEVKWEEVKSKRRDMTVFSHLFLGGIPSELRSVSLQLTSKTVKDHTSFTGWIMDVKVNDSEPAIISSAGVHEDLCGSENTCLNGGVCSVVEDKPTCDCSQTGYQGKDCSEGLAHLMMLDRGMEEYVATFRGSEYFCYDLSLNPIQSSSDEITLSFRTLQRNGLMLHTGKIADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNEWHDVKVLRNLRQHSGVGYAMVTISVDGILTTTGYTQEEYTMLGSDDFLYVGGSPSTADLPGSPVSNNFMGCLREVVYKNNDAELELSRLAYQGDPKLQIHGVVAFKCESVATLDAITFETPESFLTLPKWNAKKSGSISFDFRTTEPNGLLLFSCGRAKQHNKEAKSPVTLKVDFFAIEMLDGLLYLLLDMGSGTTKTLALNKKVNDGEWYHVDFQRDGKSGTISINSVRTPYLCPGDSELLDLDDPLYLGGVPESSSGTVFPTGAWSALLNYGYVGCVRDLFIDGRSVDVRRAAELQRAAGVKPSCGKEPSGKCVSEPCLNRGVCREGWSRYICDCTGTGFLGHSCERDATILSFDGSKFLKVQFSAAMHTEAEDVSLRFRSLRAYGVLMASTSTHTTDTLRLELEAGRVRLTVNLDCNRINCTTSKGPESLFAGQNLNDDEWHTVRVIRRGKSLKLSVDDLPTVDGEIPGDHTQLEFHNIETGIITGKRQLPTMPSNFIGHLQSLMFNGKPYIDLCKNGDIDYCQTNAPIGFKSIIADPVTFKSCSSYVTLPSLQAYYYMYLFFQFKTTSADGLILYNSGDGNDFIAVELVKGYLHYISDLGNGAHLIKGNSIKPLNDNHWHNVMISRDPNNLHTVRIDTKTTSQTTLGAKNLDLKGDLFVGGVPEQMYKDLPKLVHAKEGFQGCLASVDLNGRLPDLMTEALVCIGQIERGCEGPSSSCEEDSCANQGVCLQQWENFTCDCSMTTYAGPLCADPGSTYVFGRQGGVITYSWPPHDRPSTRVDRLALGFITLMEDATLVRVDSSAGLGDYLKLHIVKGNVVAVFNVGTYDINIEENGKLVNDGNYHIVRLTRSGGNATLQVDDLPVIERFPPGHIDSHRLGTGRLPYRRLVEESLPKNGRQLTIFNSQMTIRIGGWQKQQVSGFQGQMSGFYYNGLKVFSMAADGDPNVRMEGSVRLVGELQSSSTPHGGATVYQSSVTEISSTTSNTITITYSTPADEQQTTDELLVASAECPSDDEDIDPCEPSSGTLCCFVPPAGPTGPAISSFPGPAEVFRESNGTTGMVVGIVAGAALCILILLYAMYKYRNRDEGSYHVDESRNYICNSNGAALKEKNTADDDSGSKSKKNKNKEYYV", "length": 1470 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A2A7I1-1", "protein_name": "Zinc finger protein 978", "gene_name": "Zfp978", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFAPHQESGRRTTKRMSASLENTAQCLLTFKDVFLDFSSEEWECLNFAQRTLYMDVMLENYNNLLFVENHCICGNYEKEKVVEQDTQHIFNEHGHIQEKSFKCNESSNIIHESSESTPHKTNHRDATLQSSNLKRHKTGTTKQVCTYKDCVNCLKGSSIISLNQGTHVEKKEHNRNKNLDEVLVSKHKPIVRQNNSEMNTYTCGEFDKCFTQSDNLQSQQRIYPGKKSYKYSESDKCFTQPSHLSIHHTIHSGEKPYKCSECDKCFTDKCTLRKHQRIHTGEKPYKCNECDKCFTDKGSLRVHQRIHTGEKPYKCSECDKCFTQTSHLSIHRRIH", "length": 335 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A8N2-1", "protein_name": "PRAME like 25", "gene_name": "Pramel25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICGHCPDQDESLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPEWPFPYLSLGKQINNCNLETLKAILEGLDILLAQKVQTSRCKLRVINWRDHDLNLWAGSHEGEGLSEFTTEKQPIENSPGCEVKKELKVMTEVLRMKGRLDESTTYLLQWAQQRTDSINLFCRKLVIEGLTKASVIEIFKTVHADCIQELILRRICIEELAFLNPYLKLMKRLFTLTLDHIIGTFSFGDSEKLDEEIIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDYLPYCLNICELKHLHLSDICLRDLLLEPLGFLLERVGDTLKILELESCCIVDFQFSALLPALSQCSHLREVTFYDNNFSLPFLKQLLHHTALLSQLISECYPAPLECYDDSGVILTHRLESFCPELLDILKAKRQLQSVSFETTQCSKCGGCYIYDQETQCCHFVELLLA", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A9Q9-1", "protein_name": "MAGE family member B5B", "gene_name": "Mageb5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRGQKNKHHRNRLKNKKHNQEKVHPQKDESQEKGHHKRDDFQDHKEARDNAAVEEKSSCSSPSVPGETLEKPPASKTSSDAGWLSCVSSPATVCGDELEFDDGTYFHCGGNSLYSEYRTCQENPCKHCLDMYVNLVEQYVLYKFKMKKLIDRNKLIDLIEPKYRYNFSDIFKRAFENIEIVFAASVIEIDSTNHVYDLVSKLKLPNKGRVCPGRGLPKTGLLMTILAMIFMNGTSASEEDIWKFLNYMQVYPGRKHFIYREPRKLITQDFVKLKYLEYKQISLSDPPCYRFQWGPKAYTETTKMKVLEFMAKGSGVEPSTFSVQYTEALREENQKTKIRKWYPILAQKHCPGHSHQHVQKVMKPQ", "length": 366 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ADW8-1", "protein_name": "Predicted gene 15128", "gene_name": "Gm15128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANREDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHDSRRSRNRFRRAPVQSERSHVYSGRTNNYTDRPQHDLSNRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIAHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESFDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW6-1", "protein_name": "PRAME like 22", "gene_name": "Pramel22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHRLLREEALAISSLKDLPNMLFPVLFEEAFIFGYTKILKAMIPEWPFPYLSIAVLIDNCNLESLKAVLEGLDILLAQKVHSSRCKLKEISWRDTNHGLDGIRPGSHEVEGLSEFMEQKHPNCVEKKELKVTTELSVMNGRLNESDTYLLEWTQQRKDSIHLFCRKLVIQSLTKATVIEIFKIVNADCIPELELCSLCLEDLAFLNPYLRQMDNLLELTLDHITDSLSIGDSEMLEERMITLVSQLPTFPCLQKLCINDVYFIYGNLKEFLGCLKKPLVSFCISNCELSQSDLDYLPYCLNIFELKCLYIINIHLQYLCLEPLGFLLESVRHTLGCLALKSCNMGEPHFKSLLPALSQCFHLTDVNFQENELSLLSLKQLLQHTSKLTQLSYEMYPAPHECYDDRGVILSHRIEQFCPEVLDMLRAKRQPKDINFVTTQCSKCGIYYVYDLETQRCRFLK", "length": 460 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW7-1", "protein_name": "PRAME like 23", "gene_name": "Pramel23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNVNSPPTLMKLASQRLLREEALAISALKDLPNMLFPVMFEEAFINGHTKILKAMIPLWPFPYFSLGMMIKNLTLDTLKAVLQEIDILISKVVHSSRCKLKEIKWKNTDYGLQGIWPGSHEFDGLSEFMEQKQPDCGVKKELKVITHLKLMEGSLDECATYLLQWAQQRKDSIHLCCRKLKIQGSINATVIEIFKIVHADCIQELELCCLCLEDLDFLNPYLKQINNLIRLKLDEIKGTVSMGESRNIDEEKVITLISQLPTLQHLEKLCINDVSFIEGNLKECLRCLKKTLEILCITNCYLLQSDLDYLPYCLNILELKCLDFSNIPLSHLFLEHLRFLFERVRHTLECPILKSCEMGESQFNSLLPAISQCCQLTEVNFYDNELSLIFLKKFLHHTAKLSQLTYELYPAPLECYDNRDIILSHRLENFCPELLNILRAKKTAQGGHLCYNPML", "length": 455 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AHC7-1", "protein_name": "SSX member B14", "gene_name": "Ssxb14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVISCEKIPMEVLHKPKNICKAFQDISTYFSGEEWGKLTEWQKSAYMYMKRNYTRMTGVTVNQPVFMSGKEQAKQSLVKGIEVHDSEDECFEESFGVTPRKRMKLTSVTISIHNVEGSLASGENDSNLAETDGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 168 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AK42-1", "protein_name": "Pre-mRNA-splicing factor CWC22 homolog", "gene_name": "Cwc22rt5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKSSVAHMKQSSGHNRRETHSSYCRSSSPEDRYTEQERFPRDRDYSDYSRSDYERSRRGYSYDDSMESRSRDREKRRERERDADHRKRPWKSPSPDRSPARGIRQSSPQEEPTWKKKKDELDPLLTRTGGAYIPPAKLRMMQEQITDKSSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLAQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDSDSNTDQGAGSSEDEEEEEEEEEEEEEEGEDEEGGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFAESQTKELCNMILDCCAQQRTYENFFGLLAGRFCMLEKEYMESFESIFKEQYDTIHRLETNKLRNVAKVFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPEAEQKKTALTSSSSESSSASDSSDSDSDSSESSSESSSEASDSSSSSSTQSSTSAKGTRKKRQGKARGEEVDKLARGHQALERRQGGREDQRHQEGRTERARSERHRAQNSRDADWRDSLAKHIDDRSHENSHSRVGNGREQGSHREPEDRHGEPKKKQREKRFFL", "length": 830 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE0-1", "protein_name": "Reproductive homeobox 2F", "gene_name": "Rhox2f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYLLDVGPEEDEENANGVKTLMVLLAGDGRNEGESGRGLPGSGASAAEGYRAGEISAGGPAAQVADLMDDSNQEDLGATACDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHLWRHSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE1-1", "protein_name": "Reproductive homeobox 3F", "gene_name": "Rhox3f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSMSNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDNTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEALRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREKYRWYKRL", "length": 215 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ASJ1-1", "protein_name": "PRAME like 14", "gene_name": "Pramel14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDLEAPPTLLQLAAQCTVRKEVLTISVLQNLPMKLFPPLFKEADILRKAKMIKLLVEYWPYPSLLVGLLIDKTNLETFQAILEGVGTWLKRKYRPRMGKLQVVDLRNGHHDFWDMLAGREGGDQLVETMPEKQEVEGHSRRQRLRVFSDLSFKSSRHEDKQQTHLLQWAKDREGFLHLCCEKLEIGALGVSKVKKVLKLLQPEFIKELELNTVGNLSKLTKLVPCISKMRNLQKLMLVRIFGRHTYTPLEERNVTKILSLFPKLSYLQHLTIDDVYFLRDHMNELFRYLEAPLLSLTITLCQISQSDLESFSQHWNYGQLKHLCLKGVSLSTLNVTPLKFFLESVADTLQTLELEDCRMKDSHLRILLPALTKCTRLTSINFYDNNISRDVLQDLLHRTANMSQLTMELYPAPVEVYNEWSYVQVERFSQLCAELMNTLITVRRPKSVCFGTYSCYDCDTHCIYGNQTTFCECLE", "length": 475 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ATW2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADIHNVTEFFFLGLSSNQEVQRVCFVIFLFLYMAIVLGNLLMVVIVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLIVDLLAEKKSISVWGCMAQLFFMHFFGGIEMFLLMMMAYDRYVAICKPLHYTSIMNRQVCTVLVGMAWMGGFVHSLAQVLLIFRLPFCGPNIIDHYFCDVLPVLKLVCSDTFLIGLLIVVNGGTLTVISFVVLLSSYAVILFHLRTQSAEGRRKALSTCGSHVTVVVIFFAPCVFIYLRPTATLPIDKMVTVFYTVITPLLNPIIYSLRNAEVKKVIKILCTRATKVDKK", "length": 309 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWL9-1", "protein_name": "Reproductive homeobox 2C", "gene_name": "Rhox2c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSVNYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGASAAEGYRAGELSAGGLAAPVADLMDNSNQEDLGATGCDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHGWQQSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWM0-1", "protein_name": "Reproductive homeobox 3C", "gene_name": "Rhox3c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVERAGRNLFQVNGHRSALLPELPQDYHRASRSVYGCETKMDSTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BED8-1", "protein_name": "Predicted gene, 58953", "gene_name": "Samt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQFVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEE3-1", "protein_name": "Spermatogenesis associated multipass transmembrane protein 1d", "gene_name": "Samt1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQLVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI6-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 10", "gene_name": "Msantd5f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLAWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI8-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 8", "gene_name": "Msantd5f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLVWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFR3-1", "protein_name": "Histone H2A", "gene_name": "H2al1j", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTHSQRGEFPLSLVDRFLPEGNHSGRLSSSAPVILDSVLEYLSSNILELAGEVAYTTGRKRIAPEDVGLVVQNNEQLCQLFKPGATSVFDPPEPDDN", "length": 109 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFZ7-1", "protein_name": "BTB domain containing 35, family member 9", "gene_name": "Btbd35f11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BH64-1", "protein_name": "Secretoglobin, family 1B, member 30", "gene_name": "Scgb1b30", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLTGALLLLGAALLLTSEGDCGLCPVLQKKVHKFFDGTTEEYVEYLKQYNNDPLVLENAANIKKCSDRMLAEEDKTQATNFINKVTGSRSC", "length": 92 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BHG6-1", "protein_name": "BTB domain containing 35, family member 7", "gene_name": "Btbd35f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSFGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI40-1", "protein_name": "X-linked lymphocyte-regulated 4A", "gene_name": "Xlr4a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSDDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKTVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI45-1", "protein_name": "X-linked lymphocyte-regulated 5A", "gene_name": "Xlr5a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKKKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQHTIVEKEISKVQNRVIMETQDQDISMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI50-1", "protein_name": "X-linked lymphocyte-regulated 5B", "gene_name": "Xlr5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKRKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQQTIVEKEISKVQNRVIMETQDQDIAMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI74-1", "protein_name": "SSX member B6", "gene_name": "Ssxb6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSSCEKIPMEVLYEPKNICKAFQDISTYFSDEEWVKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMRGKEQAKQSLVEGIEIHDSDDECFEGSFGVTPIKRMKLTSVTISIHNVEGSHDSGENDSNLAETGGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BIM8-1", "protein_name": "Major urinary protein 18", "gene_name": "Mup18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 181 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CEK7-1", "protein_name": "Major urinary protein 14", "gene_name": "Mup14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG71-1", "protein_name": "BTB domain containing 35, family member 19", "gene_name": "Btbd35f20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLQPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKMRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTLKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG92-1", "protein_name": "BTB domain containing 35, family member 10", "gene_name": "Btbd35f10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CGC2-1", "protein_name": "BTB domain containing 35, family member 3", "gene_name": "Btbd35f4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQRMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 496 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A3KG49-1", "protein_name": "PWWP domain containing 4C", "gene_name": "Pwwp4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSEYVLCGWKSQLCPARVLSRPRTPAHSKRRGVPFLEVQILPVGEKRRVRSSKVRPLAKSEIISINSLAGKESRGRGSPGQTRASRRALKVALDGLGEGSSFFQGGRAGSRRTSTLAPKVPKEQASSSSSSLGQRLRLRLRQLLPLSLCQRLHLHLRLRLHLHMHLCLQGRNQKGQGLSQRSPGKRVRPDPGPVMMGSQNVPAVPVGEAQAHTAAGLPRSEVEGDVLRGTRVWPSYSKKTPLGKAGGNPGKRKPGTGKRKLRSLSAPASRKGTRSKTEQQAASGPPRHISISPKALKQRVRCAGLEIRAAGAQRKTALAENKDHPGLGTPKPDSKRASAACMPPVLRLRRSLRIASRKKKTHVLCALCGLPEWEPQVHSKVTNTRFKRRGARVQKDAKATNVVSAQEPSTIEQGTLVWFKFQDLPFWPAVVKSVSKIDKMARVLLIEGNMQFERRGIRVPLRKLKHLDCGEKVSLVRRASRLYAQGINWCFSVIDHYREGLSRGSLLGSFMDYYTTQASYPLRRAVQEGDLHIDFPKVSYAELEDWEEETALGGKGPYKKLLPDRMRAAWDRANQKLVDFIVKRKGADQHLLDIVKGRKPSRWLDDLWKSKREVFCIETYLEDDDQLHLVARHLQEVAKEADEALLSLARGDKVRFTMEVLFPEAIIYSIAALDELSYKEAEEKYLRGPPVHYREKELFDKTILKAARKRSAARIRAARDPPVPTP", "length": 728 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A5WVZ0-1", "protein_name": "2.7.1.138", "gene_name": "cerk", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEKQSTLLCSELSVQRRLYEVTLNCAILAWKDVQNAKKHTGRAIYGAVKAGSHCVPVCEIIAVQEKEDDSPCKDTGKWQKVPQSPTDSCQHAFTVYYVERTRQHCWRCSNVTFQYSEHSLCLLWIQTIKEQLALLSAQSTEELAGVHQPLRRKTTRQADLRPQSGPHLFPGFHFHRRDWPHSFSAHPSELRFYIIADGKEPVMKCTGDCFSPRVQLHHLMQLIDGLHQASRKMQFNCQMNIMMFLPPLYHQPGNNGFSLFVSIVTEHANHARDHLKAEADLKKYDGVVCVGGDGMFSEIMHGLVSRTQQDAGVDENSTEETLIPCGLRIGIIPAGSTDCICYATVGSNDPVTSALHMVVGDSQPMDVCSVHSDDRFLRYSVSLLGYGFYGDVLKDSERKRWMGPARYNISGVKTFLSHRYYEGTVSFLPAEENLGTPRDKVQCRSGCSICRRSSSDKLLSKEDEASVSDVDCRDTWTVIRGKFLAINAANMSCACPRSPKGLSPSAHLADGTTDLILVRKCSRVDFLRHLLRHTNKKDQFDHSFVEVYRVKQFRFTPRFQECGSEMDLRESRAGGKHFFCQICRENRACGCMSSQSNWNCDGEILPHTAIQVRVHCQLIKLFARGIEEQPVFEDLYAHCQLNNPPNHEP", "length": 649 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A5WWD5-1", "protein_name": "alpha-1,2-Mannosidase", "gene_name": "man1b1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLPSTRKDFVSLTLSESGSYSNSKQWRRQSCWRKWKQLSRLQRSLILLTLMLLLVCGIATSPTLIGHWRGMNGDDVKNSFVVDLKNEYRSILPEPPSERKDFDRRGAFGLEKLLQGKVNVSGVLGDQNHGLDLKNADKGSEGQKPIISWRGAVIEEEQASDTDTKDTENQGDPASLALAESRLEAVREAFRHAWKGYKDFAWGHDELKPISKSYGEWFGLGLTLIDALDTMWILGLQEEFAEAREWVAKELSFDKNVDVNLFESTIRILGGLLSTYHLTGDNLFLDKAKEIGFRLMPAFSTPSKIPYSDVNIGKGTAHPPRWTSDSTVAEVTSIQLEFRELSRLTGDPKYKLAVMEVMKQVHKLDGKQDGLVPMFINTNNGLFTHQGIYTLGARADSYYEYLLKQWIQGGRIEQELLEDYLQAVEGVKKNLLKKSTPLGLTFVGELSHGHFSPKMDHLVCFLPGTLALGVHYGLPADHMELAKQLIETCYQMYAQMETGLSPEIAHFNMHDGSTQDVDVKIADRHNLLRPETVESLFYLYRLTRDKKYQQWGWEILQNFNKYTRVPTGGYTSINNVRDPSYTSPRDKMESFFLGETLKYFYLLFSEDPTLISLDKYVFNTEAHPLPVWPQAE", "length": 632 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A6NCW0-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 3", "gene_name": "USP17L3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALASGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NCW7-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4", "gene_name": "USP17L4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGYYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATEESTLDHWKFPQEQNKMKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSMNSTDQESMNTGTLASLQGRTRRSKGKNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NDS4-1", "protein_name": "TBC1 domain family member 3B", "gene_name": "TBC1D3B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDISGTLRKHMFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQSKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGRKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NJZ7-1", "protein_name": "RIMS-binding protein 3C", "gene_name": "RIMBP3C", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAKDSPSPLGASPKKPGCSSPAAAVLENQRRELEKLRAELEAERAGWRAERRRFAARERQLREEAERERRQLADRLRSKWEAQRSRELRQLQEEMQREREAEIRQLLRWKEAEQRQLQQLLHRERDGVVRQARELQRQLAEELVNRGHCSRPGASEVSAAQCRCRLQEVLAQLRWQTDGEQAARIRYLQAALEVERQLFLKYILAHFRGHPALSGSPDPQAVHSLEEPLPQTSSGSCHAPKPACQLGSLDSLSAEVGVRSRSLGLVSSACSSSPDGLLSTHASSLDCFAPACSRSLDSTRSLPKASKSEERPSSPDTSTPGSRRLSPPPSPLPPPPPPSAHRKLSNPRGGEGSESQPCEVLTPSPPGLGHHELIKLNWLLAKALWVLARRCYTLQEENKQLRRAGCPYQADEKVKRLKVKRAELTGLARRLADRARELQETNLRAVSAPIPGESCAGLELCQVFARQRARDLSEQASAPLAKDKQIEELRQECHLLQARVASGPCSDLHTGRGGPCTQWLNVRDLDRLQRESQREVLRLQRQLMLQQGNGGAWPEAGGQSATCEEVRRQMLALERELDQRRRECQELGTQAAPARRRGEEAETQLQAALLKNAWLAEENGRLQAKTDWVRKVEAENSEVRGHLGRACQERDASGLIAEQLLQQAARGQDRQQQLQRDPQKALCDLHPSWKEIQALQCRPGHPPEQPWETSQMPESQVKGSRRPKFHARPEDYAVSQPNRDIQEKREASLEESPVALGESASVPQVSETVPASQPLSKKTSSQSNSSSEGSMWATVPSSPTLDRDTASEVDDLEPDSVSLALEMGGSAAPAAPKLKIFMAQYNYNPFEGPNDHPEGELPLTAGDYIYIFGDMDEDGFYEGELDDGRRGLVPSNFVEQIPDSYIPGCLPAKSPDLGPSQLPAGQDEALEEDSLLSGKAQGMVDRGLCQMVRVGSKTEVATEILDTKTEACQLGLLQSMGKQGLSRPLLGTKGVLRMAPMQLHLQNVTATSANITWVYSSHRHPHVVYLDDREHALTPAGVSCYTFQGLCPGTHYRVRVEVRLPWDLLQVYWGTMSSTVTFDTLLAGPPYPPLDVLVERHASPGVLVVSWLPVTIDSAGSSNGVQVTGYAVYADGLKVCEVADATAGSTVLEFSQLQVPLTWQKVSVRTMSLCGESLDSVPAQIPEDFFMCHRWPETPPFSYTCGDPSTYRVTFPVCPQKLSLAPPSAKASPHNPGSCGEPQAKFLEAFFEEPPRRQSPVSNLGSEGECPSSGAGSQAQELAEAWEGCRKDLLFQKSPQNHRPPSVSDQPGEKENCYQHMGTSKSPAPGFIHLRTECGPRKEPCQEKAALERVLRQKQDAQGFTPPQLGASQQYASDFHNVLKEEQEALCLDLRGTERREERREPEPHSRQGQALGVKRGCQLHEPSSALCPAPSAKVIKMPRGGPQQLGTGANTPARVFVALSDYNPLVMSANLKAAEEELVFQKRQLLRVWGSQDTHDFYLSECNRQVGNIPGRLVAEMEVGTEQTDRRWRSPAQGHLPSVAHLEDFQGLIIPQGSSLVLQGNSKRLPLWTPKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYYGELGGHRGLVPAHLLDHMSLHGH", "length": 1639 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A7TZG3-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 9", "gene_name": "Skint9", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSASCLPGFFMSFLLLQNTVLTQAMRSDIKINIQVPDTEGLLLECTSGSLIPPAEMTWRDSNGNIIPHSTAFNSQDRDGLLYLKSSILLKNRAKGPITCSIYNVTTNQEKKRSIVLPDALFKSENMSLMSNKFSCPSIYLITIIFLNFLRGILVFCCLRRKPVCFRNLMSTVMEALYSKMGVCCLLIWECLLLVLYIAFLPIYVSFRSRAFLLDDTYPLYTNWLWNICIILTVIMVLFPGLILCLLWTLNCYGQVSSLPPTSMELSTKDSEQNSSKSDDSQENYDVNCKILETCESKIFSQHQESCEDDTASTLFIS", "length": 319 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A7XV14-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 11", "gene_name": "Skint11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEPSASCLPGFFMVCILLKITVLTQVMSLDIQINTQIPDTEEGVLVECTAESLFPPAEMTWRDSKGNIIPPSSTFDSQDRAGLLCLKSTILLKNRTEGPITCSIYNKTTNQEKRRSIILSDVLFRPQYMSLMSNNLLYLGIYLIFILFLNFLKGILFCLTKRLVHFRKRMIKIKKVWSNKTRACCPLIWEFLEIVLFIAFLPLYLMFRIRVFTLDEAHILYNNWLWKVCKTLIAMMILFTVLILFLLWTLNRYGKMPCLSSMNIDVSTHDAEQNSSKSAKFQENYDVAGQMILETYEETIFCQHQESCEEYNYDPLLLSSLDALGTCEDEKFSQHQESFEEDEDLQSFSDFKIELYSKLGNLTH", "length": 364 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B0BMZ6-1", "protein_name": "Cilia- and flagella-associated protein 119", "gene_name": "Cfap119", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MITPRSSQSLEMKVQTELEHSPKLQEEPDRSPSLVDSSVIRIGTDEQNESPAEATSSPVEVAEDPGANLFPPPLPQPRICMWKYLDIHSMHRLEKAATVEEMREVLAELLELGGPEQSLRDAIILDLFSHALIFCRQQGFSLEQTSAACALLQDLHKACVATPLGNVEECYRYFTSVLFCHGVRRPPFSIDLFKEEQLLALADYVVNTYFRHFKLYKYVFTPQVRLDLSLSYMGLQSLHLWPEEKEDEEATVEQAATPQEEEPEAVTEAEQQPSEVCILQTYIKCQLNKELRQLQQLVEERLKESEERLSNRLAALERPYQTPPSKGKSKAK", "length": 332 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B0G0Z9-1", "protein_name": "Probable polyketide synthase 6", "gene_name": "pks6", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLKNIDLIEKGVAIVGIGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSEASLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGASNIDYQHTNKHQDSVLKNAIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSDISIVGGVNLILDVEMTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECVGVVVLKNLQDAIKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSAPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTAIQIYSKSNYLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQSTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNLNIELPLYQWSDELYFAQNQVLEQHRKGGPPIDHLGLSNSYYSPFKNSYKTLIDINYKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDHKSNEWIQSSNSNFQLLDHGNDIPSNYNIKEIIKNKCNLSKLTKNELYKNIKSKTGLNYTGVFQGVTECYIGDNCTLSVVSLESQTNSFLNIPILDTCLHGMLILINDQCQIVFDKAIGFKYYSSNIPADFKENKDSFYVYSNLRPRVGGDSYHGTIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFQSSLNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSFEEKDDTYFEFNKVIIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKIYKCSYLRKKNQVISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYHPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLTTNGQLVFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCGMPQQSWYQLLNSCNFKDIVMSKECIFFGSVIQAQKPPISLLNSQPKYDNIIIYGGSINSSFVENIKLDSNSKSLFQIETIQEFNKLISKSTITNDSIVYFIKTLETLSLDNFKQITLEYIEINQKLLQINSLCKHVLIVSDSRKTNYLASSAIGAARYFDEFPLLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKKIQIKPSKISHIEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGRDGFGLSTFEILKWKGFKSNLFVTVNSDKTKQYLLKKYGDLITGIYSNTDKSYVAEIKNKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLTKYGRIIDLNSNHLNQSEFLKNINFKYNHGYHNFELSLFQKNKILKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINDILNENQQIRNIDSIFHFAFQQIACKVQEINMKHLNISHGAKSMGAINLHNQSIKRNWKLINFVMASSALSFIDSTDQCTYACANTLLDSFSKYRVSLGLPSTCINLGLIESTGFVSKNESISVFLDGNGIIPTPINRVLGLLDLQIQNASKFTNSMISNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQNKYLPSNRIDYWKNEMKFEESIKPIPNEIRSRNNNSGKIILLTGTTGFLGGFLLFNMLRLDSCKLIYCLIRNKSKSSYPLDEIINNLKYHQLYEKLNKSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKNYNIPSILIRPPSIFLNPETGIGHSSDLTLLMIQSCYELGYCPNQILNGFILINTITWLSNNITNIIMNDNCWTNSKMNIYNVHGKQIQSSLIIKPLEKHFNCKQINNNDWIDMVNNSNKKSCIKLKSFHSLENIFKSENKGYKSNESQSISLSTKSLLESMGSYNTDLKITDKMIISHIKHIFK", "length": 2924 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G100-1", "protein_name": "Probable polyketide synthase 7", "gene_name": "pks7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNFKNINLIEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYLHTNKHQDSVLKNVIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAISQGYHSILNGTSDISIVGGVNLILDVETTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECAGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNEKLSVNEIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRKNEKPVSMMINNFGVTGSNCCLLISEFKKQDYEPYENNYKSNNKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLCQRSVIAASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLINSKLSKYYGYSVLEKLRSIGDDDTTSIHDPNISQPAVCMISVSLFELYCHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYHRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSVLKLNIQSNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIINPVRFTQTISNIYKHIESNQLNNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNKKIDLPLYQWSDETYFAQTQTLEQHREEGPPIDHLGISNSFISPFNNSYKTLIDINNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNQWTQSSNSNFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTHIKSKTGLNYTGVFKGVTECYIGDNCSLSVVSLESQTNSFLNIPILDTCLHGMLVLINDQCQIVFDKTIGFKYYSSNIPAYFKENKDCFYVYSHLKSKSADSYHGSIIVMLSDGSVLYEIQEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSQIPTPSYFKSIIYENDSFHSIVNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKFYKCNNFKKKNQIISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYLPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQVVEQMYQLLTPNGQLVFVEPPYKSILIDSIVGSFDQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDIVMSKECIFGSVIQAQKPPISLLNSQPKHDNIIIYGGGNNSRFFENIKLYSNSKSLIQIETIQEFNQFINKSTITNDSIIYFIKTLETLSLDNFAQITLEYIEINKKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSKISHIEASSIPIDYLASFISLFNVGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFKSNLFVTVNSDETKQYLLDRYGDFISGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKNARIIDLTSNHLNQSEFLKNINFKYNHSYHNFQLSLFQKNKIQKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSIDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYACANTLLDSFSKYRVSLGLPSACINFGSIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNSGKFTNSMLSNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENIGNKNIDELFIEKVSELFSTDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQCGREI", "length": 2513 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G101-1", "protein_name": "Probable polyketide synthase 8/35", "gene_name": "pks8", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLEIINLIDKGVAIVGVGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSDAHQIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYQHINKHQDSVLKNVIAQSAYAVSNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVGMIKAYSYLSMLSKTHGKCKAFDESGDGFTRGECATIVVLKNLQDAVKDGNRIYCVINGSSSNVDGGGHMDKVNLYSPSKQSQFNNINSAFKSTNGKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRINEKPVSMMINNFGVTGSNCCLLISEFKKQDYESYENNNNNKSNHKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLYQRSVVIASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNDEIFKKSIDLIDSKLSKYYGYSVWGKLTTIKDDDLTSIHDPIFAQPALCMLSVSLFEIYCHWGVNPSFILGHSLGEISAAYCSGMIDLDTFCYTVYYRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNDIVFIEIAPHPTISFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYSINFKCQLENKKSNQSINLPLYQWDDELYFAQTQTLEQYTKEGPPIDHLGLSNSYYSPFKNSYRTFIDINNKPFQYLKGHMVKGKYYFPGCGYIDIIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTQIKSKTGLNYTGVFQGATECYLGNDCSLSVLSLKSQTNSFLNIPILDTCLHGMLVLINDQSQIVFDKAIGFKYYSSNIPSDLKEYKDSIYVYSNLKPKNADSYHGSIIVMLSDGSVLYEIQEVIFKSLIPIKHSLKIEYPNDELYKVHLQSKDSQIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKNQRLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSKIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCSYLRKKYQMISHVIIHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYRSLTIDESLLENQAIKPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFIEPPYKSVLIDSIIGSFEQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDILMSKECIFVGSVIHAQKPPISLLNSQPKHDNIIIYGGGGNLSFVENIKLDSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNYKQITLEYIEINQRLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILVDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNNNNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSNISHNEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVDLDETKQYLLDRYGDFITGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKSGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFQLSLIQKNKIQKCLYEISHAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAVNLHNQSIKRNWKLINFVMASSALSLIGSTDQCTYACANLLLDSFSKYRESLGLPSACINLGSIESTGFVSKNESISEFTDGIGYVPTPINLVLGLLDLQIQNAGKFTNSMLSNLISSKFKNIQQTSLFLKFDYLMNLNDNSEQTKKENIGNKNIDELFIEKVSELFSTDQSRINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIKQLQNNTINISIKMILNSLMKNNQI", "length": 2514 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G110-1", "protein_name": "Acyl-coenzyme A oxidase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKNRIEIIKKHLEVNNSQTTNNKDEVLEKELFNSIDTNINVGELKLLIDSVEESKYKDETREFIRNHPKFKENFIGLDMATYRQLVLEQCAAIANRGLIHFTDIKNNLHRYIGALEMFALYNNNILTKLSVQYTLFGGPIIFLGTSRHEKYIEDANTLKTMGCFAMTEIGHGSNVRGIETTAHYDKQTKEFIIHSPTPTSEKFWIGCAYLHATYAVVFANLIIDGTNYGIHAFIVPLRCPKSGAIMKGITIKDCGHKLGLNGIDNGQIRFDQVRIPRENLLNKYSDVSEDGVYKSQFNTPIKNFAATMSPFIVGRMAITKGCSGAAKTSLSIAIEFSHIRKQFGPSSNKELPLITLSSQQRRLMAPLARTILFDLYIQRLTNELCQEKLPASIHAHCSGIKAVYSWFCVAALQTCREACGGQGYRSANRIAEFKNDCDIICTYEGDNTVLMQQLAKYLLGVKQKQTNTTTNRIYLDGEDAKSLFFNFSNINQLFETREEMRLAELKQIIDNSKESAYFAFNNAIPWAVKLGFAHMTKIVFQNSINTLKLKNVKPLTHLIMLDALVSIEEDLGWFVSNHLISPNVAQSIPFLIQDLCFEVTKVSKQIIASFDIPENCKPSSKDLISDLF", "length": 629 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G138-1", "protein_name": "Probable polyketide synthase 21", "gene_name": "pks21", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLENKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSIAMGFQSIQNGTSNLSIVGGVSLLLDPYISKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSKTSTPSKPLLIGSLKSNIGHSEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNNNEKPVSMVINNFGVTGSNCCLILSQFIEQSINQNGNGHSYPAESQQQQQQRFLIPFSANSVKSLKNYEDLIINDIKISTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTNNDKSSNITIKRNQPLVVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLNLKENNIFCAFLGSLSSFHTSSQHSTKNEILPLDIPSKQSRIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDVNFKCQFNHNDDDVSSIRNSKVNISLPNYQFDEQHYWKVDINFEQYRLNGPNVFNSLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNQDIIINNLEFLAPFVLKENVKHTLQTNVYQLGNTDYRVTFNIKDNKTNQWVQTCTGNFQLISLKDNNNDHSSKYDINQLLSECNFTTLSKQEVYKHSRSITGITHLGAFQGIEELYFGNDCIISKIQVNTENFDIDGKPVYQTYDKSFFNTALLDSCSQTIVGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLESDSYKSSVLVLLEDGTKLLEMDCISLHSTLPLLNSLLINNPTTELFTNNLQCKDSLVNILSIDNNQTFSSISSSNTVTEIIKQTIKPIINEKIVFRILQSFSDLELSKQIIETLNQIFDDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDGDDETIIKSIFNILSSNGLLLIIGDDIGDKYNIDSLINLGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKESKYTNEFMKLISNNHISCKQTIISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGTARYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNQIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISNENQNCEFKVGDNVFGIACDTTASHVIADVLYVSHKPENISHVEAASLPVIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIELMHINKKVVSRLLKSISNALNENKLKPIPITTFQIEDVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKSVDVGDPIEMRKSINQILLENPNIDNIDSIFHYAFAQITKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCSYVSANLVLDSLSRYRKSIGLPSTCTNWGAIKSAGFVSRNELVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKNSNLIVSKFNYDSIKKLSSETSTFQRLDFILNSIKEKDNDSNGGENSVSESIQTKILNKISELLSIEQSKINTDIRLSDYGADSLTSVQLKNFIDKDIKSNVITLQQLQNNTIDMNIQTILEQIKKLDSNETKGKSKNIIKKDSAPTLDYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKIKVIVGNLASPLLGLSKLDFDYISNQINLIINSGADINLASNYEESKVVNIGGFIELIKLSTTGDYQKPIVGFSSVSVFFNASNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLLREVAKRGIPSMLIRPPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPKIDKNILTSPIGWISLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSAMNPSFSFLEKQYGCEMVEYEQWKNIINQSKILSCVKLKTFHSLDDLYNIYNLGNGFGVSKKTKELLQSMNSYEGGMVNEKMIQNHINYIFKN", "length": 2779 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G149-1", "protein_name": "Transmembrane protein 184F", "gene_name": "tmem184F", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLSHINIIYIIWILLFFFTCLISFFLVNRHLVNYSSPNVQKNVVRIVMFLPLNSGLSILSSIFPGIAIFNSLVRNCYMAFTAHCFFSMMTNSIGEKNMLDLFESQGKMKFLCCKVMKLNRKLFNTLRFGSIQFFIVKIFCSIATITCISISEEVHSILNVQSFAPYEFLISLVASIFCTISLSIFLAISKEKLSQYWPMTKYRIMIFIFFIEQFEYLFFALIFLRGPFFLGFKNSFDQTIFILHFTVVVTMFLFSIVYLFIYSYKNYRNKASNEPLVGRNFKDSFGLLNYLDVLNPKDLFIDFASIFKTNNNKFKELVEENGDKKPKKNIEDQNQENSNDQPLSIQMA", "length": 348 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G188-1", "protein_name": "GATA zinc finger domain-containing protein 16", "gene_name": "gtaP", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSYQIQNQPYQQIQNTHPSFQQVQPMQVPHLQQQQQHQTMIAQQQHTPPQQHTPPQMNMIQQHTQPMLSQPQISLQMQPPSPILASQQQQQHMQSSPILASSNLTNSNNASQTTLPIITSKLLLKKEPIDQEVVNSTHKTTTTNNKPPKQSKRKEKERLEEEKQTVAQQQQYQPPFIPLASNESNSDNPFKGSHAYGVSTTPYGNSQFNNNNNNNNNNNNNNNNSNNNSNNNNGNNNINNNNNNSNNNNNNNSNNNNNNSNNNNGNNNNNNNNNNNNNNNNHNTNNNNSNSNNNNNNGYQQDKKDDYSMMIWSEVGRKINILIRTTSKATKGTPISTQEIAEAIGASNGVTADLVELIKSINDPTYVRKLPPSSISNTPTMGSQSGGMVYNSSPMLSPSTMSPILQHGNYQMGGDMYFGGNNQFSGDKQSALNNVKNSKGGNTNNSGGGSSSGGTNDTQAKKPARRRKMRYGGTELSCHTCGVTNTPEWRRGPNGAKTLCNACGLAWAKSVKSEKQKELLANSTGVNITEPKKAQKRKKESSDNNNNNNNSSDSNKVLKSDDGSNNTNLTNDDDNGYPSSPNSSNSTSPSSHNINNNNNNNNNNNNNNNNNNNNNNNNNNNNIGNNNNNNINNNNTTNSITTPTTTPFPTTIPAMQIVSQLPVMVPQTQQQPHMSGNIISFQALHQNSGYQHYK", "length": 695 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0R191-1", "protein_name": "C-X-C motif chemokine 11-6", "gene_name": "cxcl11.6", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MKTLAAFLLLSCLIAGEVNGQDRSSRARCFCVDKGLNMVLLKNLDKVEIFPPSPSCNKHEIVVTLKNGAGQKCLNPDSKFTKNVVLKAIGKRMQQSVPHSTTTGTVKSSMTSSTSAPTAFK", "length": 121 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "B1AV09-1", "protein_name": "Leucine zipper protein 4", "gene_name": "Luzp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANHEDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHYSRRSRNRFRRAPVHSERSHVYSGRTNNYTDRPHHDLSDRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIDHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESLDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AY40-1", "protein_name": "SSX member B8", "gene_name": "Ssxb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSFCEKVPMEVLYEPKNICKAFQDISTYFSDEEWGKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMSGKEQDKQSLVEGIEVHDSEDECFEGSFGVTPIKQMKLTPVTISIHNVEGSLASGENNSNLAETSGIQVNVWSHRLRERKYRVIYEEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AYI3-1", "protein_name": "Predicted gene 13272", "gene_name": "Gm13287", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLAELRSVPGHQCLRDRTDFPCPWKEGTNITPMTLGETTSCYSQTLRQVLHLFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AZM5-1", "protein_name": "Predicted gene 12886", "gene_name": "Gm12886", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLPCSLWLLSVCLLSWCCDAKLPVALDPESESVPKPPVLKTATEIAAIVVFMKTSNETPKSGTYGQSLQDGKNKIKDVEKEVLDACSQLCQSLAQDPNLHHGYILRAYFKEHQFLCCF", "length": 119 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1B0R2-1", "protein_name": "Spindlin family, member 2D", "gene_name": "Spin2d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSKLTKKRAGRKRQRSRSPALPKRNIVGCRISHKWKEGDEHITQWNGTVLDQVPVNPSLYLVKYDGIDSVHALELYKDKRVLSLKVISKRVVSSGVTDSSFADAIVGKEVNHLFEGEHGSKEEWRGMVLSQAPILDNSFYITYERDPILYTYQLLDDFKEGDLQIMEGFSDPPSLDIDLELVDGLIGKHVEYTNDDGSKRDGLIIYQIETKPRVYLVKYEDDVHIHVTHLEKEL", "length": 236 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B4F7F0-1", "protein_name": "Claudin", "gene_name": "Cldn6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASTGLQILGIVLTLLGWVNALVSCALPMWKVTAFIGNSIVVAQMVWEGLWMSCVVQSTGQMQCKVYDSLLALPQDLQAARALCVITLLIVLLGLLLYLAGAKCTTCVEDKNSKSRLVLISGVIFVISGVLTLIPICWTAHAIIQDFYNPLVADAQKRELGASLYLGWAASGLLLIGGGLLCCACSSGGTQGPSHYVARYSSPVPHSRGPSEYPSKNYV", "length": 219 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B7ZW38-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein C-like 3", "gene_name": "HNRNPCL3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASNVTNKMDPHSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIAGCSVHKGFAFVQYDKEKNARAAVAGEDGRMIASQVVDINLAAEPKVNRGNAGVKRSAAEMYGSSFDLDYNLQRDYYGGMYSFPARVPPPPPIALAVVPSKRQRISGNTSRRGKSGFNSKSGKRGSSKSGKLKGDDLQAIKQELTQIKQKVDSLLENLEKIEKEHCKQGVEVKNAKSEEEQTSSSSKKDKTHVKMESEGGADDSVEEGDLLCDDDNEDQGDNQLELIKDDEKGAEEGEDDRDRANGQDDS", "length": 293 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "B8JKF6-1", "protein_name": "BTB domain containing 35, family member 13", "gene_name": "Btbd35f13", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRFLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGAINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD1-1", "protein_name": "Spermatogenesis-associated protein 31F1B", "gene_name": "Spata31f1b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD2-1", "protein_name": "Spermatogenesis-associated protein 31F1C", "gene_name": "Spata31f1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD3-1", "protein_name": "Spermatogenesis-associated protein 31F1D", "gene_name": "Spata31f1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HLM6-1", "protein_name": "Small integral membrane protein 20", "gene_name": "Smim20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAARNLRTALIFGGFISMVGAAFYPIYFRPLLRLEEYQKEQAVNRAGIVQEDVQPPGLKVWSDPFGRK", "length": 69 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "C7G009-1", "protein_name": "Thioredoxin fold domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLILNGNWLVKFGAGWSGHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEYESICIKYNIIGYPSLVFFDEGEIKHYRGPRLFENFKEAIDKHLNKEFVAFSQNQPSKIIVITNENLDLLLTGNWLVKFGAAWSLHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEDNSICKKYNITGYPSLVFFNEGQIKHYTGPRQFENFKEAIDKHFKYGVKWSGHCKKFQPVLENLAQHYNSDIENSKIKVAQVHCEGDDSICKKYNITGYPSLVFFDEGETKPYRGLREFDKIKEATDKHFK", "length": 303 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G010-1", "protein_name": "Calcineurin-like phosphoesterase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLKIKFSIISLFILKLVISKPILKFNNNNQFKIIQFTDLHYGSEPVDDIDTIFSQVNILDYEKPDLVILSGDMVTGYEEQFEDDDRNYWKYWNVFTRPFVERNIPWAITFGNHDGEGALSTNEILKIDQTFNLSLSQSNPVEMHGIANYVLKISSSNSLKSEPASLVYIFDSSTKGCSKLDWGCVHQDQVDWFKNTSKSFNKTDSIAFVHIPPVEIIDLWNNYPVYGNYSETSCCFDNDYGDFVSSLVESGDVHGLYFGHDHENDFHGDYKGVDLGYGRKSGAGSYSSKKPLGARVFQLTESPFTLSTWIREEDGNIVSQVIHPPSEFDRKPLQCKMKDKYSKKELIAIKVIGGFLIFLGIVVVGLIGFFGFKHYKKFKKQTLEMQNLV", "length": 390 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G064-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKDEKQFQQFPNKGRTVQANTDLPKGSTVFRCAPFASSIEDSDKLATEKYCGFCLQRIPKSDSKECLCKNCKLYSVCKSCRSINESAVEPFQIIIKSTFHLGSDTRDMRLLLRIIANIANGKQGMQTPIDDYQDFMGLTSTLDKVDKEHMTKFKRGVTSISSLISSVRGVGYLKNTITIHEILECFSSVLTNAHQFSYATSKEIGRGVCPTGYFNHSCMPNTTWSLDDQGMLLFSTSSNVKKGDELSLGYLANEYPLKNRRRELLDGYYFFCQCPLCEFQSNLSGYLCEKCKEPLLNDSIVYHEPSLTNPLDTGIGLIKHLRKMIDFRQQSVEFKKMFSSEQLSNILQKGVPKHIQSVFNCDASDNEELQQIVEISERSIKSLPLINGEPIDFYPLSDRNYYEYFKQLKNSKISSPEELQRIKDKILSLINPTIYNSFKDKIDKRLLI", "length": 449 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C9JPN9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 12", "gene_name": "USP17L12", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLKLSSTTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "D3YTW8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r258", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSIHQFVILVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAESRATQTILIVVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNL", "length": 314 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTX5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r259", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY1-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r107", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLDFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r138", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YXI8-1", "protein_name": "Predicted gene 10377", "gene_name": "Gm10376", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQAGSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQNNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKILCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAVMSNPCA", "length": 184 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYI9-1", "protein_name": "Predicted gene 7347", "gene_name": "Gm7347", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYY1-1", "protein_name": "Secretoglobin, family 2B, member 7", "gene_name": "Scgb2b7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACFPFFEAYASVLSGSRVWLYQELQAFDATAEEKVALEKIQDCYSEESIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z236-1", "protein_name": "Predicted gene 3676", "gene_name": "Gm3676", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQTVSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQHNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKTLCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAAMSNPCA", "length": 184 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z8D1-1", "protein_name": "SIGLEC family like 1", "gene_name": "Siglecl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLWGLRSLLLLHLGFLSPVLVDTKKTAVEDGLCSTVPCVIEFSKAPLRKPMIVSYRLNENISFHAGTSQPRGPVADLSTEEVEYCILLTHNMLGRKNMTYSLYVGLGAQKDLTQKQELHIPGSSMAGEPVSLTCTIHSTCQESKALFLSWKGPIMSSSTTVPINPSSALAIDPKPEDQDTTLRCHLKLSLDNLSSSKVVKLQLVSPARLLNYSCLLKRTLTCSCSFHGIPTPSVQWWVGRTPVSVNSIDAILHMTSTTLESWTNSTIHLMWEPEIIKSLRCEGKNQYGVHASGIFLIPDKSSVSSVFLRGLIQGIVYGAIASALFFFFLVVLGMKILNWWEENQTCKNEEAPTLKKPVWGGAKPAEVGS", "length": 369 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z8T0-1", "protein_name": "High mobility group nucleosomal binding domain 2, pseudo 3", "gene_name": "AABR07053402.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAERDAQGDEAKAKDEPQRRSARLSAKPAPSKPKKAPAKKREKIPKRKERKADAGKDANNPAENRDAKTGQAQKAEGAGVAK", "length": 86 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z9U8-1", "protein_name": "S100 calcium binding protein A7 like 2", "gene_name": "S100a7l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSSEQEVMKLFDLFQNYHVRRTDKLDVQETKRVLREFFPNFMKALNASGIKILNDLEKEITLDEIWDMIGRMAMAYNKKNSNALKD", "length": 91 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZAM9-1", "protein_name": "Olfactory receptor", "gene_name": "Or4f60b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKKVNYSVTSEFVFLGFTNSWDIQLLLFLVSSMFYVACIMGNCLIIFTVASDTHLHSPMYFLLANLSFIDVGISSATSPKMISDLLKKHKVISFRGCVIQIFFNQAIGGAEMVLLIAMAFDRYVAICKPLHYLTMMSPQMCLFFLITAWVVGLMHSVIQLIFIVNLPLCGPNILDSFFCDLPQFIKLACMNTYRLELLVSISSGFMSLVSFFLLSISYIVIILTVLKHSSSGAYKALSTLSAHVTVVVLFFGPAIFFYIWPSSTHLDKFLVLFDAVVTPFLNPVIYTLRNKEMKRAMRRVFRHLMGYRQIS", "length": 311 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZC26-1", "protein_name": "Ferritin", "gene_name": "Fthl17fl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEDAINNHIRLLLQASYSYLSMAFYFDRDDVALGNFKRFFLSKSHNCKASAEMFVFMQNKRGGHVFLPSIAKPDRESWHGGLRAMECAFRMEMTINQSLLNMHELAKGKDDAHLCDFLGQHCLDQQVHVLKKMGGYLTNLRQMGAPEQGLAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCM9-1", "protein_name": "Dynein axonemal assembly factor 3", "gene_name": "Dnaaf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTTPAGSGNGFGTVSWWGLSPALDLQAESPPVDPDSQSKTEHKIPELDALLLGSVDGRHMLRTLARAMLWPLRRFNFYVLENNLEAVARHMLIFSLALEEPEKMGLQERSETFLELWGNALLRPSVAAFLRAQASHLSNLVPEPDRLEELLPWLSLRPLKFRERDALEAVFRFWSGGEKGPEVFPMSRLWDSRLRHYLGSRYDARRGVADWDLRMKLHDRGAQVIHFHEFRRWRDTGVAFELRDLSAYHVPNRTMASGRLLSHRGERVAARGYWGDIATGPFVAFGIEADDKSLLRTSNGQPVKTASEITQHNVTELFRDVAAWRGPRAIKGNVEETKSPEPDAPAQEPFTIHFLPLDSSQTLHHKTCYRGRFQLLYVSCGMIHLLSPELGACVAPGGNLVVELARYLVDLRPKELKAFSDRVVEIAQAAGFAPHTGTKPSETFARFYKLGDSTRGGGDSAVESGPVPSKVLAPTPESINPPQADQAPSLEVMSPPKVDQTPPLEAMSPPEADQAPPLEAMSPPRADQIPPLEAMSPLQAEVVLPLEAISPPQADLAPPPEVISPVQEALAMSSAIAPLKHVT", "length": 583 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCW3-1", "protein_name": "SPATA31 subfamily E, member 1", "gene_name": "Spata31e1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METFLLLMNSISDFWMSSSSMSTVMDMIFAILCGVGFFFLLIPFLKEYPGSPPPGSKKNISEVVKRRQSKDRKKSVTVDGCRDSQKNSLDIQHDLQTMESPIQHLLLDSSPHPFWNSKEKLNQLSLPQLFSYLKVLEALIQQKFNQLLLGLSSVLSESVVATAWVSREPSSGERKTVRFSDSLGFDQALPLAKGPPQRCLDQPLPHQLVTPSLVGMTEIQEQENLPNSISYQTPSIFQSRARGTAYPTTATGIQVPLPTTNEPCHPGLNWKDIPSCKVQNCQGASSQPTESLARCTLPTKNTRSASIPPEHYLMVHHHEQPQHEEKAINLGEQQRTHARFLPSKEPAQLQGDSPPNSNGYGKNWPELNQPAQPSTLNSKTYKWNQMMGPVPTGMLLKKVIAKYGIPNTIKKDLKLRVKDLLCTSSSTPGESLETKNLTLRTDEHSMNTTENLSFLDPKTTMMKSNIMQLPMKHRQLPCDSKAEPYTKAAFILENLHHQDPGGIRVETASSARLRSPLFEQSPPEVQKTQSSPPPIDSHGHSRSHPDQWQRYQSVQPHALCSQAQPQQSRSIQGTGRSILQPNISVWMSKHERWMRSEDVASGHTSWSSRTVGYRDRVSPSVAKQTNILKIKEESPHVWRANLGSGEITNEQALNNSNEDFEPIEAKRSQGHLQMPTQQNTGYLHLKTEEYSNNDLKVNKQPQAWSVSHHADGSNTVHHAMVKLPSQHSLPSLQNGWQDPKTSQGLGDLLMNRDQSVETQFRVHKDKTEATNDSVFHPSEKRPSNLKYGGISQGERLGRVKSSISSFTQLKDSAKTESKSSPNIGGKREAPSKSSLKFIWNGAQYENLSTKLKGQRDSLKKDIPPPVTEQTQEVVHRINVIYSTAVELQSLMDSLVHKLVKTVGEPSELTRKHMTKVQEYKMESLPFQLGSSSQPSKGLHDPNKSRSVRRMSDDHTSPKEPNNHTFTYRGNRDKMQAGVDVQRVCYQHLDKVKIGFGQHSTPMRNGNPCFHKKAGDKQESSLADQSTGDADQTKPKNEIVGSPHRIPERHNQSSRYREIRDNQEPSVDHKAIDPHQNTKKGMGYSQLMSPKENHPVKISGTAAQGASDPEEIRTKSGKECSPHRSPKMHDHSLRHREVRDKPQPGINTQRAYDQHLNSPKKRMTSENLLTPKGTNHPCWHRVTGDKQQSSLSDQRACDPEQMRRSGMSSYPQRSPKVYHLSCSSEKIGEKLLPLVNDQRTHDKHPNSVKTRGCDNLPTPKGSNHPQGYRVIEDKQQLGLAYRRTCDPGQIKKSGMGKGPCKDTEECNLLYRYKIIGNKQQPGIVHRACDRHQSSKEGMGQGQPMNPKVCHSAKHRRTGGQDQSGVAAQGASNPR", "length": 1373 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDD6-1", "protein_name": "Synaptonemal complex central element protein 3", "gene_name": "Syce3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADSDPGERSYDNMLKMLSDLNKDLERLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCKEEMEKNWQELLTETKRKQ", "length": 88 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDJ1-1", "protein_name": "Olfactory receptor", "gene_name": "Or13c3f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDDMDKNNQTFVSEFLLLGLSGYPKTEILYFVIVLVMYLVILTGNGVLIIASIFDSHLHTPMYFFLGNLSFLDICYTTSSVPSTLVSLISKKRNISFSGCTVQMFVGFAMGSTECLLLGMMAFDRYVAICNPLRYSVIMSKEVYVSMASASWFSGGINSVVQTSLAMRLPFCGNNVINHFTCEVLAVLKLACADISLNIVTMVISNMAFLVLPLLLIFFSYVFILYTILRMNSASGRRKAFSTCSAHLTVVVIFYGTIFSMYAKPKSQDLTGKDKFQTSDKIISLFYGVVTPMLNPIIYSLRNKDVKAAVKYILKQKYIP", "length": 320 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDT4-1", "protein_name": "Transmembrane protein 92-like", "gene_name": "LOC100364194", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQEAWVLDALTVIFGLLFSLQGVSSNKTIYKCEDIHCPKGFRCCDNECCLERKIWNTDNEPFRILFIILLVMLPLLCICGLVRRFCPKCRELQHEVRTADHQSPPDPPSIAPLESIWVTSLDPPPPYSQVVQKSTPTEPPPPYSLRPEDSTCPMRETSHETL", "length": 162 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFJ9-1", "protein_name": "Family with sequence similarity 24 member B", "gene_name": "Fam24b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSSFDLRTIIMIVIGSGILAAMFLLTGVVLCLYSKIARALNPSGTGKELDDQLCSDPCKTTQDQIIRVNSLNADTCRPFHGSTIGLENCQPLQCFSACGTYEGANSLTPCLCNTKEGL", "length": 119 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFW5-1", "protein_name": "Transmembrane protein 107", "gene_name": "Tmem107", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRISGLVPSRFLTLLAHLVIVITLFWSRESNIQACLPLKFTPEEYEKQDNQLVAALCLTLGLFAVELAGFLSGVSMFNSTQSLLSIAAHCSASVALSFFIFERWECTTYWYIFAFCSAFPAVTETALFIAVFGLKKKPF", "length": 140 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZG05-1", "protein_name": "40S ribosomal protein S12", "gene_name": "LOC120100003", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEEGIAAGGVMDINTALQEVPKTALIHDGLARGICEAAKALDKRQGHLCVLASNYDEPMYVKLVAALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFEYKK", "length": 132 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGM7-1", "protein_name": "Peptidase inhibitor 16", "gene_name": "Pi16", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNCRVSWMPQHSSAAVSGICPPQEGPWSSYSLWPEPPLLREKEAVAKDSRGVDSTLVQTQGTQPSWRHCVSWAGPPDTAPAAPPQPGWCLCGKDFKSSRQTPDRERQRGLATMHSSCSPWVMLPQLPLLLLLLLLLLTATGPATALTEDEKQTMVELHNHYRAQVSPPASDMLQMRWDDELAAFAKAYAQKCVWGHNKERGRRGENLFAITDEGMDVPLAVGNWHEEHEYYNLSTATCDPGQMCGHYTQVVWSKTERIGCGSHFCETLQGVEEANIHLLVCNYEPPGNVKGRKPYQEGTPCSQCPLGYSCVNSLCEPERKPEKAQDSPPRVTEVPGSRETGIPSLATSESLHFSSVTKVSDSLATEPSPAVETKAPPSLATEGPSSMATEAQSFLTEVPSVSATHIQPSLDEGPVNFLTSTHIPVPKSTDKEASSKSRAASVSPEKSLYPKMSPTETGESPPQIQEEAEPKAELPEREDELPEAEVELPEAEAELPEAKAELPVSSEALVPVLPAQERGGPKASLEHSSYPVPTYLPNFPSASGNATGGRTLALQSSRTGAEDPEKASWDSKNSAPVWGPFPGLLLPLLLLAGIF", "length": 596 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGX2-1", "protein_name": "C-type lectin domain family 2, member M", "gene_name": "Clec2m", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTESSLRLSQSSHHRLTFDLKKVVTLWILVIGVIAVLLWGFFSFPKKFTVTRQTKNEVCSDGVKICLHGWNKLNRNCFTHFSHANSWFTAKETCKFHDATLAVFNDQTELDIVMKQMEDIQTFWIGLYKKDFRGPWVWTNGSKYNNWYEVQDYGHCAFLHKSGIDSTNCNDLKEYICTQEGHCP", "length": 185 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZIZ8-1", "protein_name": "Ferritin", "gene_name": "RGD1560203", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEEAVNTHIRLLLQASYSYLSMAFYFDRDDVALENFKRFFLSKSHDCKASVEMFVFMQNKRGGHVFLPSIAKPDRKSWQGGFRAMECAFRMEMTINQSLLNLHELAKGKGDAHLCNFLGQHCLDQQVHVLKKIGGYLTNLRQMGAPEQALAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKK4-1", "protein_name": "Zinc finger protein 869", "gene_name": "Zfp869", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDTPIVGLSSPDQGLVSFEDLVVHFTQDEWDLLEASQKSLYGDVMLETFRNLTAVGYEWEDEAIEDHCEEPEVNLRDIVSHSEYTHEYEHKEYEEKPPDANFLTSVEGCVETKTSSGPSVCEVCLKTFGLYHLTYNGHHNYDYKELRGSQTEENDCEGNSCDKTSGSLQKEDKIHTGKKLYVCQECGKAFRYPSALQLHERIHTGEKPYECKDCGKAFRGLSALHLHERIHTGEKPYECKQCGRAFTYLSALQLHERIHTEERPCECKQCGKTFRYSRALKLHERIHTGEKPYECKQCGKFFRSHRTLKLHKRIHTGEKPYECKECGKAFRWLTSLKLHEKIHTGEKPYECQECGKAFRCQASYHRHKITHGGETLYECKECGKSFIYPSLLQVHERTHTGEKPFECKLCGKAFRCQSSLRLHERTHTGEKPYECKHCGKAFSSYNYLRFHERSHTGEKPYECKECGKTFTHRSYLRSHERRHTGEKPYQCIQCGRSFSRHSSFKRHQSVHGESPYEQYLIPLSPFSSKE", "length": 530 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKM3-1", "protein_name": "Protein GPR15LG", "gene_name": "Gpr15lg", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRLLTLSGLFFMLFLCLCVLSSEGRKRPAKFPKLRPCCHLSPRSKPITWKGNHTRPCRPCRKLESNSWVVPGALPQI", "length": 77 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZL22-1", "protein_name": "Olfactory receptor", "gene_name": "Or1x2b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSKWGENETGVIEFLLLGITNDPQQQRILFWAFLCMYLVTVAGNTLIFLAISSDPHLHTPMYFFLANLSFDDVCFTTNIIPRLLAGHVSGTETISYAYCLTQMYFLISFGNVDTFLLAAMALDRFVAICYPLQYHTIITPRLCVGLASVVWISSGLIALVHTLLMSRLTFCSSIPEISHFYCDAYLLMKLACSDTRINQLVFLGAVVFFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDSFSTQDTVATIMFTVVTPMLNPFIYSLRNKDMKETVTRLLHRGSKSS", "length": 313 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZLG9-1", "protein_name": "N-terminal Ras-GEF domain-containing protein", "gene_name": "AABR07047293.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSCCVWTTEGSGLKKDKNEGQGGTWKFMLLSCLQCLWPFAQKEIDLTRDNQAQDHEDQGEHEYAPQVVTEPCRESRISADMVENLVNRLVSSLQGGDPFFIPAFLYGYRQFTTTQHVLDRLLKRFAYFYLGCEEDEQIKSSLCCFLDTWIDQYPEEFSQTILKKLKTYLTVNMPSSDLNLRVHMLLKELRQESNESEGKDDDSVSLPVTLLYKTASAADLSSSVEVGSHTSGDLDIEVWFPSQKVQPEPAYPHETETPQSTIKVISWD", "length": 269 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZMT2-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3", "gene_name": "Ndufa3-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGRSSDFFKNAQAKEPVLVVSFSVWGLAVILPMISPYIKYAGVISKATPYNCPVPVRDNGNVPGVPSQPQERLSPSLERLKNL", "length": 84 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNA3-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "AABR07049918.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQETKNVVNPLFEKRSKNFGIGQDIQPKRDLTRFVKWPHYIRLQWQRAILYKQVKVPPAINQFLQALVRQTVTQLLKLAHKYRPETKQEKKQRLLAHAEKKAAGKGDVPTERPPVLRAGVNTVTTLVENKKAQLVVTAHDVDPIELVVFLPALCRKMGVPYCIIRGKARLGRLVHRKTCTTVAFTQVNSKDKGALAKLVEAIRTNYDDRYDEIRCHWGGNVLGPKSVARIAKLEKVKAKEFATKLG", "length": 266 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNR1-1", "protein_name": "Elongin-B", "gene_name": "Elobl9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVFLMIRRKKTTIFIEAQELTTVLELKRIVQGILKRPPEEQLLFKDDQLLDESKTLRDCGFTSRVAKAQDPATVGLVFREDASEGLQIHPYSTPLLPSVMKTGTDSLE", "length": 109 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNU6-1", "protein_name": "Olfactory receptor", "gene_name": "Or5p66b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSWLENGNHTTVAEFLLLGLTDDPVLRVILFTIILCIYLVTVSGNLSTILLIRVSSQLHHPMYFFLSHLASVDIGYSSSVTPNMLVNFLVERNIISYLGCGIQLSLVAFFGAAECFLLAAMAYDRFMAICNPLLYSTKMSTQVCILLVVASYIGGFLNASFAMVSFCSFLFCGPNIINHFFCDFAPLIELSCSDVSVYVIATSFSAGSVTMITALVIAISYSYILITILKMHSTEGRQKAFSTCTSHLTAVTLFYGTVTFIYVMPKSSFSIDQNKIVSVFYLLVIPMLNPLIYSLRNNEIKSALKKQIWRKTVS", "length": 314 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZPU6-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC134485591", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRSTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAEGIIVNKQVKGKILTKRINVRIEHIKHSKSRDSFLKRVKENDQKEKEAKEKGTWVPLKRQPAPPREAHFVRTNGKEPERLEPSPYGFMA", "length": 160 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQ96-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC102550668", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKVKRRGTRYVFSRPFRKHGVVPLVTYMRLYKKGDIVDIKGMGAAQKGMTHKCYHGKTVRVYNVTQHAVGIIVNKQVKGKILAKRINVWIEHIKHSKSRDSFLKQVKENDQKKEEAKEKGTWVQLSLQPAPPREAHFVRTNGKEPELLEPVP", "length": 155 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQD9-1", "protein_name": "Developmental pluripotency-associated protein 3-like", "gene_name": "LOC120096627", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDKSSEKVDPVVNPETQMNDGSQREDEEDSPDDSEILQPETLVKVMKKLTLNPSAKPPKYHRHQRVRLRIKSQPVGNRSERIMREVQSAFPKTRVRTLLSVLKDPIARMRRFVRIEQRQRQLEGNERRDEPFRCLCTFCHYQRWDPSENAKIGQNQKN", "length": 158 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQT0-1", "protein_name": "Glyceraldehyde-3-phosphate dehydrogenase", "gene_name": "AABR07071101.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MILCIKPSSTTKYCLNQCYLISCINKPNLLDGVNGIPLDIVAINDPFIDLNYVVYMFQYDSTHGKFNGTVKAENGKLVINGKPTTIFQERDLANIKWGDADAKYVMESTGIFTTMEKAGAHLKGGTKMVIISAPLADAPILKYDNSLKIVSNASYTTNCLAPLTKVIHDNFGIVEGLMTTVHTITATQKIVDGPSGKLWRGGHGAAQNINPETTGVAKAVGKVIPELNGKLTGIAFHVLTPNVSVVDLTCHLKKPAKYDDIKKVVKQASKGPLKGILGYTEDQVVSCDFNSNSHSSTFDARTGIALNDNFVKLISWCDNEYGYSNRVVDLMAYMASKE", "length": 338 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZTK7-1", "protein_name": "Uncharacterized protein", "gene_name": "AABR07012426.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSGDLEAKISGYTHISVQRFCYKWTISNFSFCMDGIRENITSPVFSLEGNEEVQWCLRIFPNGVDEESKDYLSVSLGLHSCPKSPVLAKVQFWIINAQGEKHQIKEIPNILSFSPKHQWGLRKFILREFLLSRRHGLLPEDQLILCCKVSVVGPSFSTPGHNMTPANKDPRQMLADDVGELWENSLFTDCSLVVAGQEFRAHKAILAARSPVFRAMFEHEMLESLTNRIEIHDIHLQVFKEMMAFIYTGKAPHLHSHSMATELLAAADMYDLQDLKVMCEDSLCRNLSVKTAVPTLMADLHSTELLKTRVMDFIILHASEVSETLEWKSMVESHPHLVEEAFGSLASMHYFFLEPSLKR", "length": 359 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZV50-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLVARSWVCHKTYVTPRRPFEKSRLDQELKLIGEYGLRNKHEVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIVVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLRLAKSIHHAHVLIRQRHIRVRKQVVNIPSFIVCLDSHKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEKKEK", "length": 195 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZWL0-1", "protein_name": "Ribosomal protein L32 like 1", "gene_name": "Rpl32l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALQPLVKLKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILKPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNLNARLRSAENE", "length": 135 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A176-1", "protein_name": "Golgi associated RAB2 interactor 5A", "gene_name": "Garin5a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPRLRTSARSPAPAVRMAISPSGPLGFTSPVTQPRREASPGVPTTQGRGVAMKGGRDLKPASGRADRPLAQAYAPCRPGRLQRHLLSGEFDQLRDFPIFESNFVQVTRFGEVANKVTMGVAASSPALELPDLLLLAGPDKENGHLQLLGLFPLQFVQLFVHDVSRQQLKVKFRTGRAFYLQLRAPPETRDCEFGRWVRLLYRLRFHSPTCAVPFTHEDTVPEESEDEDEVEEGQLQPPEVRAGPRAQGCWARKDGKGPVSCHRGQTRPAGLRTLGALIQPRSFQITKGPEIKPAQLRAREMDF", "length": 303 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A9N2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a77d", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQNNSVSEFILLGLTEDPAGQKTLFVVFLLIYIGTMVGNLLIVWTVIASPSLDSPMYFFLAYLSLIDALYSSTILPKLLIDLLCDKKTISLTACLVQLFVEHLFGGVEIFLLVFMAYDRYVAICKPLYYLTIMNQRVCVCLVVVSWIGAFAHALVQVFSVYKLPFCGPNIIDHFACDMYPLLGLACTDTYFLGLTVVGNNGAISVVVFMLLLLSYGIILNSLKTHSQEGRRKALSTCSSHIMVIVLFFVPCIFMYVRPVSNFPLDKFITVFYTVFTPMLNPLIYTLRNLEIKKSMEKLCRKIFTSDRIRISSCYS", "length": 316 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAM5-1", "protein_name": "Preferentially expressed antigen in melanoma-like", "gene_name": "Pramel", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVKTPNKLLELAIHSLLNEESAAIQALEEIPRELFVPLFIAAFEGGHKNVLSAMVKVWPYYCLHIGSLSIQEPQHELLKAMIENLPVYPAPSSSSRGPKLRILDLRQDTDCRITCPEVSTKTPSCFYSCAYSDRSITKIERQLCCVNAECKTLLPRPVELLVDLSLDGSLMEKEFLVLLMYKIEESLGSLHVCCRDLQIDKLCKCKCTLKFLDLKCIDQLSVDRGSLSDITSILCRMIHLESLSLSNVTFRSLSGKVFKIFLSHLQRMEHLKELSLSSFCLKNHLDRVLRILPPGLDFLYLPFCDLSYRDFKFMSQSPQVTHLKLLNLSNNPMYWGDFEPFHTVLINLSGTLQHLEINHCLISDSAMSALIPALIRCTRLRVLGFASNPISMPMLVNIMHNLTPMKELKYVIYPIPVHCYERWHFQGSLDRQKLAIVQLQLKAMLELAHREDMNWITYCE", "length": 461 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAN9-1", "protein_name": "Similar to human chromosome 6 open reading frame 52", "gene_name": "C17h6orf52", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVETQSPGKECAVLPLWVLTVTSCPLPSAIREQLRVHHSLRCHRDNHYELLHSFYWLSCYSRGSTLSGNGLGPLCVTENPELLAGPWAIPEETTDPAENQEEDFLRDPNLHLNIEESDKEFMAVREELYDSLMNRRWHCLDTVLSNVPDELPQCEVF", "length": 157 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ABB6-1", "protein_name": "Olfactory receptor", "gene_name": "Or13a27c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "VNCIWHSKMVSPNQTVVTEFVLQGFSEHPSLRLFLTGCFMSLYTIALMGNIVIIALVTSSTGLHSPMYFFLCNLATMDIICTSSVLPKALVGLLSEENTISFKGCMTQLFFLVWSGSSELLLLTVMAYDRYVAICAPLHYSSRMSPQLCGALAMGVWSICAANASMHTGLMARLSFCGPKVITHFFCEIPPLLLLSCSPTYVNSIMTLIADAIYGGINFVLTLLSYGCIIASILRMRSAEGKRKAFSTCSSHLIVVAMYYSSVFFAYISPGSSYNPERSKFTSVLYSVLSPTLNPLIYTLRNKDVKLALGRILASFSH", "length": 318 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ADX2-1", "protein_name": "Olfactory receptor family 4 subfamily A member 80", "gene_name": "Or4a80", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQSKIVTEFVLLGFTQDPAGQKALFVMFSLMYIATMVGNLLIVGTVIVSPSLGSPMYFFLASLSLMDAVYSTAISPKLIVDLLREKKTISFRACISQLFIEHLFGGVDIVILVAMAYDCYVAICKPLHYLIIMNRRVCILFLVMAWAGGFAHALFQVLAVYNLPFCGPNIIDHFGCDIYPLLLLACTDTYLIGLTIIANGGAMCIVIFILLLLSYAIILRSLQNHSQEGRHKALSTCSSHITVFFLFFVPCILMYVRPVSSFPIDKSITVIYTVVTPVLNPLIYTLRNSEMKNSMEKLLQKILSPNRLRLLCCLYY", "length": 317 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AEJ6-1", "protein_name": "Peroxisomal biogenesis factor 11 gamma", "gene_name": "Pex11g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLNGLASALESYRGRDRLVRGSVGPWRDRSDLEFGQDSEMRKTGQRGGPKGTDIGRLVSYMRTSYLSLPNCWPYKCVLALQIRTLGYGCQLIGGVLVEQCPSRSEVGRRLLVVSAQLSHCRTVLRLFDDLAMFVYTKQYGLGAEEEDVFIRWLSVLSNMADQLYYPCEHVAWAADAKVLQVDSARWWTLSTAFWSLSLLLGAVKSLWTMLKLRQKLRSPTGHFASQLPRSKWRAVEARIWSEALTLLSNLADLANAVHWLPPGVLWAGCFPPWLVGLMGTISSILSVYQAARAGKQAEVDSP", "length": 304 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D6R901-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 21", "gene_name": "USP17L21", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "E0CXP6-1", "protein_name": "UMAP1-MVP12 associated (UMA) domain containing 1", "gene_name": "Umad1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFHFFRKPAESKKPSGPEPEADGFVLLGATANEVRCKTSEAEGSQALETGKEDTSSVTVSGPETENQTGQTLQNNSLTAELLSDVPFTLAPHVLAAQGTISDLPDHVLSYDVGDNLSRFWYDFTLENSVLCDL", "length": 133 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E0CZF1-1", "protein_name": "PRAME like 34", "gene_name": "Pramel34", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGQTPPTHTLLTHEALIMSSLEELPTVVFPALFKEAFAGRHTNLLKAMVAAWPFPCLPVGPLMKKPNLETLQALLDGIDMRLTREFHPRRAKLQVLDMRNMYHAFWNIRADANDSDCKSKTLDEKQLVKVLPRYARRQRLKVIVNLSISSHFNKSKAYFLNWAKQRIGSLYFCCIKMRIWDPPDQVIRDIFNVFDPEHITELELNTDWTLLQLAHFASYFGHMKNLQKVFLAPLHKNTSPIINITNATEAKCVHKIISQFSQFNCLQHIFMKHVHFLRDYMNQVLGCLMTPLETLSITQCLISQRDFDLFSCSQNLFKLKHLEIRGMILYALDLMPLRVLLEKVADTLEILDFQWCRMKDSQINALLPALSQCTQLNQINFYNNDFSMCTLKALFQHTANWSKMNVEQYPAPLQCYSELGHVSVERFVQLCQELMYTLRAIRQPKSISFATDNCQKCGKPCVYDQGPILCSCFQ", "length": 475 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E1B8K9-1", "protein_name": "40S ribosomal protein S6", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKLNISFPATGCQKVIEVDDERKLRTFYEKRMATEVAADTLGEEWKGHVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKCKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPHRLGPKRASRIRKLFNLSKEDDVRQYVVRNSLNKDGKKPRTKAPKIQRLMTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK", "length": 249 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BBD9-1", "protein_name": "RNA polymerase II subunit A C-terminal domain phosphatase SSU72", "gene_name": "LOC112445820", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPFLPLRLAVVCSSNQNRSMEAHNILSKRGFSILSFGTGTNMKLPGPARDRPNVYDFRAMYDDVYKDLLRKDKERYMQNGVLRMLERNMEKEMPRPERFQECKDLFDLILTCEERVYDQVVEDMNSGEQETCQPVHVINVNILDTNKEATLGAFLICDLCQCVQLMGDMEDRIGELLQAFEEKSGRSFLHTVCFY", "length": 195 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BLY1-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIIRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLSSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E7F638-1", "protein_name": "Moesin b", "gene_name": "msnb", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSINVRVTTMDAELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYQDSKGFSTWLKLNKRVTAQDVRKENPLLIKFRAKFYPEDVAEELIQEATQRLFFLQVKEAILNDDIYCPPETAVLLASYAVQMKHSDYNSEHHIPGYLCRDKLLPQRVLEQHKLTKEQWEQRIQVWHEQHKSMSREDAMIEYLKISQDLEMYGVNYFSIKNKKGSELWLGVDALGLNIYERSDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKSPDFVFYAPRLRINKRILALCMGNHDLYMRRRKPDTIEVQQMKAQAREEKNKRQQERALLENEKKRRENAEKETEKIARETMELMERLRQIEEQTKKAQEELEEQTKRALELERERKFAQEEAEKLEKDRRIAEDVKTALLQQSENQTKNKDNLATELAELTSKINLLEDAKKKKEDEARKWQRRAIMVEVDLEKTKEELKSKLIGVHIQATSQTENDHDENDESSAEASAELTSTGSFRDRSEEQRITETEKNEPLQKRLQALSSELADARDDSKKTANDLIHAENVRLGRDKYKTLRQIRQGNTKQRIDEFESM", "length": 577 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FA22-1", "protein_name": "Protein tyrosine phosphatase type IVA 3", "gene_name": "ptp4a3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAWLNGLYPVEVCYNSMRFVITHNPTNQTLDTFIEDLKRYDAKTVVRVCESTYDKTPLEKHGITVMDWPFDDGAPPPTKIVDDWISLLKKSFSEDPGCCVAVHCVAGLGRAPVLVAVALIEGGMKYEEAIHLIRLKRHGAFNSKQLTYLEKYRSKKRLRFKDPFKHRSKCWLM", "length": 173 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FE27-1", "protein_name": "Beta-1,4-N-acetylgalactosaminyltransferase", "gene_name": "b4galnt4b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMRFPLKKIRKQFKLLLLLVLLMFAIGFTYLHINQGKAIKLHFNYGKDMERQAEGIGSSPKKHLSSSINPFEHGDAADSQEDGWGGEELNESAQESRANAEMHTLLAQKFLGLPWKPEYKGQANLHVFEDWCGSSVSQLRKNLHFPLYPHTRTTVKKIAVAPKWKNYGLRVFGFIHPYKDGDFQFAIASDDNSELWLSSDESPLNARLLVYVGQHGSEWTAPGEFSKFRSQTSKPVRLMSSRRYYFEVLHKQDDRGSDHVEVGWRPFLPGQKFDVIDSAYISLYTDESSLKMNSVHHIPQTLASHSLALQIYHRTETHTADMLKPDPRDTFYKIPMIDQSRLENVLPSCVYSPTYVVKDFPIARYQGLQFVYLSYVYPNDFTRLTHMEKTNKCFYRESPVYLEKFGFYKYMKMDEEEDDQPVFFPKPDDFLEEEEGVDPEEAINSSNRPVKRSGPSYQTSRITAATASSKPDRLDGGSKSSVFQQEKQYVQFKEQERSKKRTKGERFYRHSQVVDDEMTEIRQVKGSTGVLESQSGSLNEQTGPSEENGDSQTLSLVQRGRSLAWVLPDPALQSESKLIETASPTVKERSPFKLPHLYVLANRILGNAGKPVVEKESNSNKIYITRPRPPVSRPKPPVEVFPGVFLYQSRKSKRLVDLSSKWRSLKTQAAASAPWANFPLMDHKTSTQSALLKQSHLSSPTEPGPHNKGDPTASISDPDSVPPSSSEKRDHPGLNSSSQPPEEEPTKISEMAEGLDVAPQSRGLEEGEMSEYSYEEAEVRPHLAEEAINWQRTFSVNPVDFELLRSDWNDLRCNVSGNLQLAENEVIDVISQFMERLNERNRGIYTLARIVNVEKRRDSARGNRYLVELLLMEGGKRLVRLSEYIYLLLHRSRFEEGIESREGTVPSSHRTPSKIPLPSGSSAQTHTTTPWSTSWAKPLLCQPIMLQWRHDVMVHFVVPVKNQARWVQQFISDMELLHRETKDENFSVIIVDFQSDDMDVEQALKESTVPRYEYLKREGNFERSSGLQMGVDTIEDSHSIVFLCDLHIHFPHNILESIRKHCVEGRLAFAPIVMRLDCGSSPLEPDGFWEVNGFGLFGIYKSDFDKIGGMNTEEFKDHWGGEDWELLDRVLQNGLEVERLRLRNFYHYFHSKRGMWNVPVKRASQG", "length": 1167 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FFR8-1", "protein_name": "Ubiquinol-cytochrome c reductase complex assembly factor 5", "gene_name": "uqcc5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLRKSQNLKYMLSLVPGKKRFGVYRFLPVFFCIGGVMEWIMINVRIGRETFYDVYRRKQSERAYQQKTEEGLIMLTDSQAK", "length": 81 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9PUW9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r143", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PUZ0-1", "protein_name": "Apolipoprotein L 11b", "gene_name": "Apol11b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWNEISEDIRKVECRTFEKVIDNATEDLITDLRSLITEDGAWNGFVEAVELSSEEGEALRDALKERLAQDPTDENDRPQREQQKERFLREFPQLKKKLEDHIRKLRDLADKFDQVHKDCTISNVVSTSASAASGVLALLGLVLSTVTAGASLALSASSVALGATSSVSSFTTTVVEDSMTLSYESEARNLIGASMNVLEEILSIMPKITCKFYNTVADLVKAFKTLKGQIQTIRRARSISRRGAQARNLTSTGRSSGQGVSQMTRGARIRAGVFTSVFLGWDVYDLVTKQRICMMGEKQSQVEHCGTWLASWRRTFRNLSRSTMLCSQTCLSDALP", "length": 337 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PV04-1", "protein_name": "Eukaryotic initiation factor 4A-III", "gene_name": "Eif4a3l1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATTTRMATSGSARKRLLKEDGMTKVEFETSEEVDATPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIMKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACVGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLTTRAIKMLVLDEADEMLNRGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTNKFMTHPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCITKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNLADLI", "length": 411 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVP9-1", "protein_name": "Predicted gene 4884", "gene_name": "Gm4884", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSENLQSSPFFGTESTLHPSLPLLSNSKQPAGTVCNFSRVSTPDVSSAWLLPSASSTSLQPLMVVQMETSLGLPPSGQTYCQLQSPELCNTCVQVSQIRPPAVNGDKALTAPIHSPSQFLALPPAPSLEQPENKTMPEIKEGTKENQDTPVLTLEHPDLQQPLHCTDTESLRQKPDSDNAHLGCICMGPKELVGLENEIGSSFDFKDITRFGADIQLPQLLNTLTDIDQDQSCENWRVTSGLFDQVRENKHKSFELLEGAPQAKFQHWDLVEGEGAVGVAGASDRAIDNMAKHPEGKAPKGPPSKNRRARKQEQERPSGPENKSKKTQELKQSRNRVKAEKEPSIPKTKRKRNPPELSQNSFKKPRTNLAMHMLESVQVFHPLGKKSEKKTGISSFRGLRTFTSNKDSGPGSVTTTVLNMPCESQGPPKSPGKVQSAESSVGKDCLSPSQYELPPAGKVKLVPLPFPTLDKPQSRPASRKPLSLALRRPTAVYPVQHHSHSVQPTTLRPAQPPPASSSLIASAKPAPPISSSATGPNVTNPNQSSAVPQLATSRPVPYRASSHTSFQRELVSAARNKVPSPPRPVPYRASSNTSFQRELVSAARNKVPSPPKPQTQYLLHDFSRQPIPWKKVDILGPVVSQPITKEQRPEREAMKRRSQQERENAVKNPSTGKLQIFLQRERDMEISQYYGYAM", "length": 694 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVW0-1", "protein_name": "Major urinary protein 8", "gene_name": "Mup8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCVGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKVHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNAMDLVPEHVLVLTRQIAASRPENEEWPEPPVLSGDFSPGLHHHPFLSIQHPQYKFCDLHSILSH", "length": 235 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVZ7-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKYFCLPRFSIISMLTGNGSFVTEFVLAGLTDRPELQLPLFYLFLIIYTVTVVGNLGLIILIGLNPHLYTPMYYFLFNLSFIDLCYSSVSSPKMLMNFVFEKNSISYEGCMTQLFFFLFFVISECYMLTSMAYDRYVAICNPLLYKVTMSPQVCSMLSFASYGMAFAGASAHTGCMLRLIFCNANVINFYLCDILPLLQLSCTSTYVNEVVVLIVVGINITVPSFTILISYVFILANILNIKSTQGRSKAFSTCSSHIMAISLFFGSGAFMYLNHSGSMNQGKISSVFYTNVVPMFNPLIYSLRNKDVKIALKKVMMRVHSRFIS", "length": 325 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW18-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r257", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW59-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b50", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALANGSFVTEFILLGLTDQPDLQMPLFLIFLIIYLITAFGNLTLIILIVLNSHLHTPMYFFLFNLSFIDLCYSSLITPKMLMNFVLEKNIISYMGCMTQFYFFGFFAISECYVLTAMAYDRYVAICNPLLYSVAMSPKMCSYFILGSYFMGFSGAMIHTGCVMRLTFCDGNTINHYFCDLLPLLQLSCTSTYVNEIELFIVTGKDIIVPTVIIFASYGFILSNILKIRSTSGRSKAFSTCSSHIIAVSMFFGSSAFMYLKPSSAVSMNEAKFSSIFYSIVVPMMNPLIYSLRNKDVKVGLKKTLSRMFSHNLISL", "length": 316 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXC3-1", "protein_name": "Cytochrome P450, family 2, subfamily c, polypeptide 69", "gene_name": "Cyp2c69", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDPFVVLVLCLSFMLLLSLWRQRSARRNLPPGPTPLPIIGNYHLIDMKDIGQCLTNFSKTYGPVFTLYFGSQPIVVLHGYEAIKEALIDHGEVFSGRGSFPFFDKVSKGKGIGFSHGNVWKATRVFTVNTLRNLAMGKRTIENKVQEEAQWLMKELKKTNGSPCDPQFIIGCAPCNVICSIVFQNRFDYKDKDFLSLIGKVNECTEILSSPGCQIFNAVPILIDYCPGRHNKFFKNHTWIKSYLLEKIKEHEESLDVTNPRDFIDYFLIQRRQDKGIEHMEYTIEHLATLVTDLVFGGTETLSSTMRFALLLLMKHTHITAKVQEEIDNVIGRHRSPCMQDRKHMPYTNAMVHEVQRYVDLGPTSLVHEVTCDTKFRNYFIPKGTQVMTSLSSVLHDSTEFPNPEVFDPGHFLDDNGNFKKSDYFVPFSAGKRICVGESLARMELFLFLTTILQNFKLKPLVDPKDIDTTPKYSGFSKIPPKFQMCFIPVE", "length": 491 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXM9-1", "protein_name": "F-box and WD-40 domain protein 24", "gene_name": "Fbxw24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLSSFPMMEIFSYLDAYSLLQVAQVNKNWNALASNDFLWRKLCQERWLFCDMVTLQLLGKETWKQFFVYRTWQEHVKSRAIPEDFTYKEIPLECGVRGYAGYISGCALTRNGQGKSVVCMVSSKNKISTWDISESVITWVSPVQPASIKLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLAGDILGNLYIFRIPDLHLISTVNVFPCGFDKIDCSPQKKWVLLSQNHPCIYPKVFYMSSLLRTSEFSDPVSTVLEFSLCKRAFWTPRREDRITLMSRRGRPIVTRFETFDMKLEENGNKTIVKGDLVASFSLQDYNENPKWMGVSDKSVIVCSTGSSLLLFSMKGLHLQTFQYSPEMIVRLWVDPVHVIITCNDGSIDVYMWEERSLLLKMCYRLQNGRHLPPFGFIKNLLCDDVSIVQLMIDRQGPCFLMAYTLNICS", "length": 466 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q069-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r157", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCHFEVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q0V3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r68", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGVAIIKENQTQSKMDFWNMGIKILFLSQTTTGILGNFSLIIYYVVNYIVHTLKPTDLILMHLMTSNALMVLSTGVLHTMAAFGLAHLLNDLGCRLILYIQRVGRSTSIGTICLLSIFQAITISHRVSCYKGQKIKSSKYIGYSISLLWVLHMFLNFILFVDIFIKRNRNNMTSDRDFKYYSIVERNEFSDSLYVALVVCPEIFSSVLITCSSGSMIGILYRHKQRVQHIRSFHVSSRNSPEWRATQNILVLVSTFLAFYTLSSVLQGCIALLNNPNWWLVNITRLTSLCFPTFAPCVLMSHYSFMPRFSLVWTWNKTS", "length": 319 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1C7-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A2", "gene_name": "Speer4a2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWMGETREGRKDADLPSKSNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHNLEMENMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIHQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 252 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1N7-1", "protein_name": "Predicted gene 8126", "gene_name": "Gm8126", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNRNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKITQSINDTIEKYKEFIEDKDSYSFMHTYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEENRFCHESSKNIHPKY", "length": 198 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q328-1", "protein_name": "RIKEN cDNA 5430401F13 gene", "gene_name": "5430401F13Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASSRILLVLLSIALLALTSAQRVNEDDGSALQEEDALEIGDSNQQHDDIHERLNEIKNHFQDQISQHGKEAIKSKKGKNGPRSRRSSDDDNLEVQDHQSGNEQAGGGQGGRGRSELKGQNGKGSQKGKKGKGGQQEQKGKGGQQKQKGKGGQKTKRGKGGQRSQQDNVQEVYQE", "length": 175 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q346-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r160", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSKLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q366-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4f2", "gene_name": "Speer4f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTMCVRLRRLFQRANVDGRETREGSMDAGLPCERNEGRRRWTWRMWMAHRQTSSPVPVTSNQFEKEEEELMEEIQLISQEKNGLRDYLNLTLGSKITRLNQSYEELKLKQKELMTLQHDLEMATMEAREENEELKKEINFYSNLHSRALMENNLIKKKLMTLQQESKEVQAEWASIQQHLDVNLSGKDEQENNSILDTQEHQVSETARELGLATDQEDSILQDELPPQEAPAEELSPQEAPAEELPPQEAPAEQLPPQEGPAEELPPQESPAEHHLQHPQSFSDESSYITYPEWE", "length": 295 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q3G0-1", "protein_name": "Zinc finger and SCAN domain containing 4B", "gene_name": "Zscan4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPIPDNAQMPVDTTQDRLLATGQENSENECNTSCNATEVNVGESCSGNEKDSLLITQKEQNHEHEEGNVVCQFPRGARRASQDTSSHHVDFPSALTPADVPMEEQPMDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKTDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQPISDPVLGKNHEANLPCESHQKRFHRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCITCQKIFKRVSDLRTHEIIHMSEKPFKCSTCEKSFSHKTNLKYHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 505 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q4E0-1", "protein_name": "RIKEN cDNA 5031410I06 gene", "gene_name": "5031410I06Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q501-1", "protein_name": "Predicted gene 2237", "gene_name": "Gm2237", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENVDEGETRPTEKEEGILSHEKGRRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSPAESRTWH", "length": 211 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q5G7-1", "protein_name": "Oogenesin-1", "gene_name": "Oog1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGYIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSAGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFSLGDSEKLDEETIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPYCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELDSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPLECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVELL", "length": 496 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q6D7-1", "protein_name": "RIKEN cDNA 1700024B05 gene", "gene_name": "1700024B05Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESHDNPVSAGRTSSQNCNITNHMKNMNKLDDMKFYIRKINAELEELFRILDIDMNTDLNYRMNTEFTIIKSQHEKTMLDMEKMKQSISDSIDKYKEFIEDNDSYSIRHTHLLKECNQLKEKVRMLLNENRKLLVEQADQEASFGEEKSSVMRPARTYIPSAKQQQL", "length": 167 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q7M8-1", "protein_name": "Predicted gene 5796", "gene_name": "Gm5796", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQSGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8A4-1", "protein_name": "F-box and WD-40 domain protein 28", "gene_name": "Fbxw28", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSVPMMEILSYLDAYSLLQAAQVNKNWNELASSDVLWRKLCQKRWLYCYMFTLPLHGLETWKQFFFDKTWQEHAKTRAKPEDFTYKEFPVEFEFRAHPWYISRHGLTRNGQEKSAVCMTSMNRISTWDIHEGAMTWESPKQPSYIVWMTTLPEMQIAVTIDMQSTIKLWDCHNKEVLASKTGLFFGCKLLQSEFTKDGPIVLVGDACGNLYIFRIPDLHLISKVNVFPYSIDELYFSPQKKWVFLIGHRLNDLTKVFYMSSLLRPSEFSAPVSTVLKVPVIRKVFWTPRREDRITLMSLILPKNITKFDTFDMKLEGIGNKVTIQGYLTASFSLAEDEGRPDYFGVSDKDVIVCSTRFSLLLFDINGLRLQTFHYCPEEIWRLWVDPVHVIVTCDAGSLDIYAWEKRSLLLRKCYRLRNRNYQQMSGYIIKTLCDDMSIISVANNSPKPCCLMAYTLSVCS", "length": 466 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8I6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r55", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDLVPKNPPTDLKCKLAHFFHMVARGTNMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVRYSCYSCWLFSVLNNAYIPMNVRGPKKSHNDSDSQGKRMCSISVVNVDMNYLQFSYDIIFIGIMVWTSVSMVIHLNRHHQRMHYIHNPNQSNRGHAETRAAHTILMLVVTFVSLYILNCICVLFHVSFVESRRWLRNVIEFLALSFPTISPLLLIFRDPRGPCSLYFNVGLEIHVTGKVITEEQ", "length": 310 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8L6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r132", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8T0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSFKNVLYFQTGLGVLANTVLLFFYVFIILGHRPKPTDLISCQLSFVHIMVVLIGGDILLADIFESLNIGNDFKCKTTFYLFRVMRGLSICITCLLSVFQAVTISPNTSVLAKFKQKVKKYMTHVFLCIWFFNLSFSTNQIFYVGGFTNVSETNQMQVTKSCSLLPMNYIIRGLIFTISISRDVFLVGVMLTTSVYMVIFLFRHQRQCKHLHSFSHPRESPEKRATQTIMLLVSFFVVLYWMDFIISFTSEMLRMYDPVILTLQKFMMYAYPTITPLVQISSDNRIIIMLKNIQSKCHPSFSLKDFFFFI", "length": 311 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8V7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r173", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSALNKALKTTEEVALQIILLCQVGIAAVANILLLVHNLSPNFAGPQLRPKHVILAHITVGNLLIILLTGFPSNIIVFVPRNPLNDLNCKLEYFIRLVARSANMCTTCVLSTYQFIVLVPGKWSRMILRGNTSTFVHYSCNSCWIISVLNNVYIPIKISGPWNTDNDTDLNSKWVCSMSGFELVMVFLRFVHDTMFISIMVWTSVSMMLLLYRHHQSLKHIHRSNGSLGLQPEARAAYTILMLVVTFVCFYLLDCMCIFFHISFVHFRVWLRHVNEILAASFPTLSPLMLIFRGPKKISAKGINTENAFINSH", "length": 313 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q9N3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r152", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFASKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFGSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAETRATHTILMLVVTFVRFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QAN3-1", "protein_name": "Predicted gene 1979", "gene_name": "Gm1979", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPPESNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QD93-1", "protein_name": "Granzyme K", "gene_name": "gzma", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDICRNLIVFHFLVFTFFKVTVCSDVSIVGGKDVKKALSWMVSIQVNQNHKCGGILIHKEWVLTAAHCKEDSYSSVTVLIGSLSLSKGSQRIAIHNYEIPETFNKKTKKDDIMLIRLSKKVKAKPYKIPKKEKDVQPGTKCVVRGWGTTDYKGKQASDKLQMLEVLVVDRVQCNRYYNRNPVITKDMLCAGNTQQHRGTCLGDSGGPLECEKNLVGVLSGSHGCGDPKKPTVYTLLSKRHITWINKILKQQFNSTRF", "length": 257 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9QLQ1-1", "protein_name": "Defensin, alpha, 35", "gene_name": "Defa35", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHDELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F1LPT0-1", "protein_name": "Gap junction protein", "gene_name": "Gjc3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCCSFLRQLLARESQHSTPVGRFLLPVLVGFRLLILVSSGPGVFGNDENEFMCHLGQPGCKTICYDVFRPLSPLRFWAFQVILMAVPSAIYVAFTLYHVIGYWEVPGRNKEQEAQICKGGRCKDVSGAMSLKLLWAYVAHLGVRLVLEGAALGVQYHLYGFKMPSTFICREDPCIGSTTCFQSHPSEKTILLNTMFGISGACLLFIFLELVLLGLGRVWKTYRHKLPLFKNLSTSERSVRHKDTTDDLSVVETKEPF", "length": 257 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LT33-1", "protein_name": "Cytochrome P450", "gene_name": "Cyp2b14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVFLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFIDTYLLHMEKEKSNHHTEFHHQNLVISVLSLFFAGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVISSHRLPTLDDRIKMPYTDAVIHEIQRFADLAPIGLPHRVTKDTMFRGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDANGTLKKSEAFLPFSTGKRTCLGEGIARNELFIFFTALLQNFSLASPVAPEDIDLTPINSGAGKIPSPYQINFLSRCVG", "length": 495 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LYQ4-1", "protein_name": "Alpha-1-B glycoprotein like 1", "gene_name": "A1bgl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLLVLLEPLASLTLTCKVCEPSKDLHRILHLSSMETACTLSLALPPTLPSASLIFSASGVHTLILLRVRLNHSLILLSLIHTGPLPRPWLSANPVPWITPGLRTFLLCQGTVRDVVFMLRREGDDGNKEKEQGIFQVHEPGNYSCNYYTNTEYTPSKPSGTVTIKEYVIPPPPMLTSLESSTVDEPEMTQMSLLCVAPLSDVEFQLRQGEREMKVLIVSTSPERASFYLKLSDMGDHSPFTCRYRLNRMTAWSEDSKPVQLMWSDETLPEPVLTVEPSPHQSFEPGSTVQFRCTAPKAGLRSEAGLRFGLHLEDLYDHRLLQTQKSSGNETVFQLRNVSATDSASYSCIYTELTPPYSGSAPSDFVILRVNGPPPPPKLQALWTGKVFAGHDVVLRCQSDVTGVIVELLRDGKFVPYRILRVLNNYSDLGLHSVGPQHTGNYTCRYTSWLPEPVQSEPSNPVELLVEGMASGVVVVGFCLLIFPGLCILVNCAI", "length": 495 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M6N1-1", "protein_name": "Zinc finger protein 945 like 1", "gene_name": "Zfp945l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTASLVNVSKCLLTFRDVAVEFSMEEWECLNYSQKTLYRDVMMENYNNLLFVENHCKYKKVLDQDPNSIVHNVNIYEKAYECNELVKMTHESSQGTPFKTKHKDASLQISTLNRQKIGNTRDEPCKFKDCINFLNVFVIRQNQRIYIGEKEPTTIEYENHYNSKHEVMLKQSNSTGNKPHIFRKYGQCFKIYSSFSRYQNDHTSEKFYKCIKCRKSFLHLSQLKVHYKIHYRKYPCKCTACSKCFYHTFGFKRHYSIHPEVNTYKSSDCDKSFIYYSSLRKHQKIFGGERHYECNEGLRSLYTVFQPVYYYIPHIGEKAYKCSECEKCFTRKYHLTVHQRIHTGEKPYKCGECDKCFTRKYHLTDHQRIHTGEKPYKCSECKKCFTRKYHLTDHQRIHTVEKPYKCSECGMSFMKKYHLRSHQSIHTGEKPYNCSECDKGFTYKGHLRRHQKIHTGEKPYKCSECAKCFTENSKLRRHQRIHTGENLYKCSECDRCFIENNKLRSHQKVHIGEKPYKYSEYDKCLTQKGSLRSHQLIHTGEKPY", "length": 544 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M7A9-1", "protein_name": "Large ribosomal subunit protein uL6", "gene_name": "AABR07026048.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MANRLAHRPIQWRNFLSQDSLDQDTMRKKTILSNQTVDIPENVDITLKGRTAIVEGPRGTLRRDFNHINVELSLLGKKEKRLRVDKWWGNGKELATVRTICSHVQNVIKGVTLGFCYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVWMRTNVACSVSQAQKDELILEGNDIELVSNSAALIQQGTTVKNKDISKFLDGIYVSEKGTVQQADE", "length": 219 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M9J5-1", "protein_name": "Uncharacterized protein", "gene_name": "Esp1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ITFLPVTLFLIILLWPSMITEGRVLTQNQKELSISADHNKNHKSDLDKIEFQGQPNIQKAVEMTICASDKDQTLLEDQANANQDKQLYKDSHLLCGRSLDHIVK", "length": 104 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1QDL3-1", "protein_name": "Novel nacht domain containing protein", "gene_name": "LOC560232", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEDKHTPGDLDLSTGCSSVHQNRAEAEPSCVSMKSDVSMDPPTNFKSGNTGPAVSSRKRKRAEAEPSCVSMKSDASMDPPLKFKSKNTQPAVSVDRDDQSGDLLQDSLQPEHDELQRVKEQHKTTMKNKHERLFEGINHGETQTLLNRIYTQLYIIEGESEGVNEEHEVIQMEKRARTKPSQHTPVYCNDIFKASAGAGHEVKIKKEKAQIKTVLTKGIAGIGKTVSVQKFILDWAEGKANQDVDFMFVLPFRELNLIRDHQYSLHRLLLDFHPELEDLEPKIYEQCRVVFIFDGLDESRITLNFSDEEKVCAVTESSSVAVLMWSLLKGDLLPSALIWITSRPAAAHQIPSRYIKRLTEIQGFTEPQKEEYFRKRISDEHQASRIISHIRRARSLQIMCHIPVFCWISSTVLQKLLEEDVSAEIPQTLTEMYIHFLLIQINMRKQKYEERDPEKLLQSNRGVILKLAEVAFRQLMKGNVMFYEEDLIESGIDVTDALVYSGICTEIFKEESVIQQRKVYSFIHLSFQEFLAAFFVFYCHLTKKRELLELILGYSYDQYLQSSSEKSLYDLLSSAVDEAVRSSNGHLDLFLRFLLGVSLESNQRLFQDLLTHTEESSESIRRITQYIKDQIKSDDYFKRAAERFINLFLCLLEVKDQTLAREIQEFVKSDKHSEEELSPAHCSTISYMIEMSEEPLDEFELQKFNTSAEGRLRLTTAVRNCRRAL", "length": 725 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QGM0-1", "protein_name": "Galectin", "gene_name": "lgals1l1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPTVLIQNMAFKVGQTLTLTGVPKPESPEFTIDIGNSSEDIALHINPRFDAHGDQCIIVCNTFQNDCWCEEHRDENFPFVQGEEFQIKITFTNEEFLVTLPDGSEINFPNRQGSEKYKYMNFTGQARIQGIEIK", "length": 134 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QMQ9-1", "protein_name": "Uncharacterized protein LOC541480", "gene_name": "si:ch1073-398c20.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MADIKQESDDIRIAEVFTLKQEDPEEQTDLLPLRKEFQGLDNVKEEEALVEEHQDITPAEKRITCSETENTTQKASEKTGSRSSFTCEQCGRDFAKQGTLNNHMRIHTGEKSFTCQQCGKGFTQKRTLRNHIRFHIEAESLSCQQCGESFTQKQDLTDHMRVHTGEKSFVCDQCGKVFLRKDGLEKHLKNHHKEKPHVCPCGKSFTDKTKLEEHTKTHTGEKPHTCDKCDECFSGKYDLIRHMRFHSAETPYICQQCGKSFALKRVLMTHVKIHTRDRPFLCKQCGKCFYRKDNFNRHVRVHTGEKPYACSECGKSFSERFQFNEHSRTHSGVKRFSCEQCGRGFNRKTELKRHMRVHTGEKPYMCPQCGKTYAFKTGFDIHMLHHNAEMPYICPQCGERFSVKQRFDVHMKIHAGNSDK", "length": 420 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1R1Q6-1", "protein_name": "Uncharacterized protein LOC641576", "gene_name": "zgc:152710", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLIWTQFGVKHKNVKCKVRVIHGEEGSWSSEEVREEPEVSSPPPSPECVDYYSVLGVSNDSNEEEIRKAYKRLALRYHPDKNSDADAEDKFKQIAQAYDVLTDPEKRNIYDQQGLTKGGVAPTCNKTDPSHNSKADAHSWHMFFNFDLDSDDDLFNPFTRNPLPHLSRHHGNKGGLKPAGDAEVHDLSVSLEDILMGVTKRVKLTRLRQTDKHTLKPEERVFDVEVKKGWKEGTRITFPNEGHQMLGHAPNDLAFVIKEKKHAHFRRDGSHIVYTCTITLREALCGCTVNVPTLDGQMKPLPCSDVIKPSSVRRLIGEGLPRAKNPAQRGDLLVEFQVVFPDRIPPSSKEIIKHSLGQC", "length": 360 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RA39-5", "protein_name": "[F-actin]-monooxygenase mical2b", "gene_name": "mical2b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGETEEERTSQAGQLFENFIQATTCKGTLQAFSVLCRQLELNPSDHRGFYSSLKTAVTFWKAKGLWGKLDKRAGHKEYSKGRACADTRCLIIGGGPCGFRTAIELALLGAKVVVIEKRDTFSRNNVLHLWPYTIHDLRNLGAKKFYGKFCAGSIDHISIRQLQLMLLKIALIVGVEVHVNVEFVKLLEPPEDQSTDGQGWRAEIRPADNPVSDYEFDVIIGADGRRSTLDGFRRKEFRGKLAIAITANFVNRNTTAEAKVEEISGVAFIFNQKFFLELKEETGIDLENIVYYKDNTHYFVMTAKKQSLLDKGVIINDYIETERLLAFDNVNQEALLSYAREAADFGTNYQLPSLDYAINHYGQPDVAMFDFTCMYASENAALVREKSHRQLLVALVGDSLLEPFWPMGTGCARGFLAAFDTAWMIKGWAQGKEPLDLLSERESIYRLLPQTTAENISKNFEQYTIDPATRYPNLNSSCVRPHQVRHLFISGEQDLSSLERSGQTRRSVSISRRESEVRPGRLLLWCQNQTQDYRGVNVTDLNTSWRSGLALCALIHRQRPELIDFDSLNEADCAKNNQLAFDVAEREFGIQPVTTGKEMDAERGPDKLIMVLYLSKFYEMFHKSTQSVTGLPKEIDANNGDCSSKTANSLYNSINHARKRIPKLDKKLEESDVNRKRKKASSHHEELMSCQTAPPAGEREEQKENKVRSMATQLLARFEENAPSCALRRQSDSESDSDADRPVSLDLTENPRFARPKIEPTHPSTTPDKAKWQPSPYLRLLESNTRSETLHTEHYVESQSSHRLTEIQSECQYSSVSSAYKSSERRPRSPLIPFTPTLSPMMHCLQQLEEQVIQQRKREPLNRKSIKERAQKLSSLFTGNPAQPQTDESSPAVSPSSPPQTIPESSTLSCLLSPAPSLTHKQCSEASETHLKADKHTEIRRVERLDPSKQRTVGKVSSAIGVKAATLAILYETDHRPNNPITLSLTEARRCAESGLVSVRKEFSASLGGSDTCVFCQKRVYIMERLSAEGFFFHRECFRCHICGCSLRLGAHTFDSQQGTFYCKMHFSQRKTSTRHRRGEIQDGGIRSSSITISNHTSTDGTRGQPSGGEFDSSTQQDLQTLPDSKEIISVSEVKDSSKKADPADSAPACPDSPLQKVKRSTAKGEITNKNILWKKKIRSTLPLVLMKKFHRGKPEDKTEVLAEEDGNSDFEEIHESLSSKKPSNPSTDSNCLPTKDNSSTPLDEIPKIPLYRTHVLPEYPKPSSSSPEPIVTSISSDPISFSPKKKLTLSLSEKEKLLNWDLTNPGKSGAEEQQQQHVKPSISLQHDHPEPTHPQPEPAPPLFGFQQWANNLRKSFSKGSNPVVLRRNRPMKARPLSEGSFNVGAVFQDEERCGSLVDEGEARPRTESEIASLLEQVALGSKTSRGTKDDMASLPPRKLNFFSSLRIKRVEGAEQSRGEGQKDILSILSRFRNKASAQQQQQQKSNSSSEDEQEPKLTHSGALQKKKEKIAIRQTKSDELKRLHRAQVIQRQLEEVEEKQRSLEEKGVALEKVLRGENGDDGSTDEAALLQTWFKLVLEKNKLSRYESELMIFAQELELEDTQSRLQQDLRRRMATEDCEKSASELVEEQNILVEIMKVVEKRDKLVSLLEEQRLKEKAEDRDLESLILSRGYQFHWT", "length": 1679 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RXL1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152495", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFTICNDSHSDFILLGFSDKPYLEKILFWVVLIFYCLTIIGNLVIILVSLKDPKLHIPMYYFLSNLSLLDLCFTSSCVPQMLVNFGGPEKTISYIGCAIQLYVFLWLGATECVLLVVMAVDRYVAVCHPLQYTTIMHPKLCLELAILAWGTGLIQSLTQSPATLQLPFCSNRRLYDIVCEVPALIQVSSADTIYNEIQMSIASIILLVVPLVIILSSYGAITKALLRVKSTEGQKKAFGTCTSHLLVVFLFYGTVTAVYLQPKSHYAHEQGKFLTLFYTVITPTLNPLIYTLRNKEVKGALIRLGKKTWDDLCWTIA", "length": 317 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD0-1", "protein_name": "Transcription elongation factor A like 3", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRQVKHLRSGSLPTPGLSVTSPSPTARPATPRTACLFPALCKTRKGEGTCPESLQDKKRRKNLNMEKLCKENEGKPESEGKPEDEVEPDNEGKSDEEEKPEVEGKSAHEGKLQNEGQPEDEGKPEDEGKQEKQGKSEDEGKPPGEGTMESQAKPESEPRAAEKRPAEDYVPRKAKRKTDRVTDDSPKDYEEDLQERHLGSEEMMREGGDLSRAQEELRKRQKMGGFHWMQRDVQDPFTPRGPRGVRGMRGGGRSQRGLHDIPYL", "length": 264 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "LLVVVLVTYLLTLVGNTVIILIASIDPNLKTPMYFFLTHLSLVDICLTTSIVPQLLWNLRGPAKTITTLGCAVQLYVSLALGSTECVLLAVMAFDRHAAICKPLHYAAVMNPRLCQALAGVAWLSGVGNALIQSTVTLWLPRCGHRRLHHFFCEVPSMIKLACVDIHTNEVQLFIASLVLLLLPLALILTSYGHIVKAVTRIKSVQAWRKALGTCGSHVMVVSLFYGTITAVYIQPNSSYAHTSGKFISLIYTVLTPTLNPLIYTLRNKDVKGAMRRLFRRDLGS", "length": 285 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S4M2-1", "protein_name": "Small ribosomal subunit protein uS13", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSLVILEKFQHILRVLNTTIDGWQKIAFATTAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVEHVITIMQNPGQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLHEDVERLKKIRAHRGLRHFWGLRVGGQHTKTTGRRGHTVGVSKKK", "length": 152 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S6C0-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGNCLTPHTSEDLLVPASATHLGGRRRRARSRERRPRDQVPGWAPAAPLVQEEQVRVPQRISQIQCLPKGVYKRDGSQEKMEQEECAICTLDFVCGDPIRSLPCKHFYHLGCIDEWLTRSFTCPYCRGPADGPQPSSRDTP", "length": 141 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7I2-1", "protein_name": "Beta-defensin", "gene_name": "DEFB125", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MNLLLTFMICGLLTLVTKAGWNVERCWSYNIGHCRRRCLHLERYKHLCMNKRACCIPLSSDDPYTQWPLPPEDQTVGMKTPYFRPVSPGSELDDQITITITVDQESTGTEQDIEGTAISFQASTPIPENIEDTKFSDKANTLNLHKL", "length": 147 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7N4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152708", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDQTNSSVVTEFVLVGLTQSLGMQFLLFLLFSTFYVGIILGNLFIVFTVISDSHLHSPMYILLANLSLIDLGLSSTTVPRMISDLFSDCKTISFHNCMIQMFFIHVTGGVEMVLLIAIAYDRYTAICKPLHYLTIMNPQMCMLLVVAAWITGVTHAVFQFAFVINLPFCGPNNVGSFYCDFPRVIKLACIDNYGLEFVVTANSGFLSTGTFFLLVVSYIFILVTVRQHSSKDLSKAFFTLSTHITVVFLFFLPCMFLYVWPFPTKSLDTFLAIVDFAVTPVLNPAIYTLRNRDMKVEMRRLSRQVISSREMT", "length": 312 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SBB9-1", "protein_name": "DNA-directed RNA polymerase RBP11-like dimerisation domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MHALPAFESFLLFKDEKITIHKDTKAPNACLFTIDKEDHTLGNVIKSQLLKDPQVLFAGCQVPHPWEHKIIVPVQTTPDYTPQEALLNVITDLISKLSLLEERLRVAIKDKQEGIECWTGRGPAWPGPALTLALLQAPCG", "length": 140 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SBV4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100154723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MESENITVVTEFIFVGLTQSRNIQLLVFVLVFIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNPRACYALSLAQWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLLTLICFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPGIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKKLLINN", "length": 305 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SJ79-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259717", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTKGTEFILLGFAGQHKSWPVLFIVFLVTYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLEEKVDLCYATAITPKMLQNFVWTEHSISFIGCMVQLLTYGAFATSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLVIGSYFMGFLNASVNTSFTFQLNFCKSNKINHFFCDAPPILALSCSSIYFSIMLLAAFVGFNLTCTVSVVIFSYVFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 310 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SLL7-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSISKFLLLGLPIQPEHQGMFFVLFLVMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFLACIDNLLLAVMAYDRYVAICHPLHYAIIMREELCLCLLVLSWLLSCAYALTHTLLLAQLSFCADIIPHFFCDLDALLKLSCSDTSLSELVTFTAGAAVVIFPFIGILVSYGHIGLSILRVPSTKGICKALSTCGSHLSVVSLFYRTSMAVYLSSSGQFHDKDIIVSVMYTVVTPMLNPFIYSLRNRDMTLALGILFRNINIFSK", "length": 311 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SMZ6-1", "protein_name": "10 kDa heat shock protein, mitochondrial", "gene_name": "HSPE1", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTRVVLDDKDYFLFRDGDILGKYVD", "length": 102 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SRB7-1", "protein_name": "Large ribosomal subunit protein eL31", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAVVQKSGEKKRGRSAINEVVTREHTTSIHKRIHGVGSKKRAPRALKEIRKFAMTEMGTPDVRNDTRLNKAVWAKGIRNVPRRICAPLSRKRNEDEDSPNKLYPLVTCVPVTTFKNLQTVNEDEN", "length": 125 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SUB9-1", "protein_name": "Multifunctional fusion protein", "gene_name": "IL1B", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MATVPEPAKEVMANNGDNNNDLLFEADGPKEMKCRTQNLDLSPLGDGSIQLQISHQLCNESSRPMVSVIVAKEKPMNPSSQVVCDDDPKSIFSSVFEEEPIVLEKHANGFLCDATPVQSVDCKLQDKDEKALVLAGPHELKALHLLTGDLKREVVFCMSFVQGDDSDDKIPVTLGIKGKNLYLSCVMKDDTPTLQLEDVDPKSYPKRDMEKRFVFYKTEIKNRVEFESALYPNWYISTSQAEQKPVFLGNSKGRQDITDFTMEVLSP", "length": 267 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F2Z5L2-1", "protein_name": "Histone H2A", "gene_name": "H2AC18", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHHKAKGK", "length": 130 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F4IWB9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 28", "gene_name": "CYP705A28", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIMGRSCSEKNGEAERVRGLVIESLALSPKIFLGMIFHKPLKKLGISLFQKDIKSVSPKFDELLEKFLVEHEEKMEEDHYKANDMMDLLLEAMEMRMQNVNLCIKRVSNTKARKPPILFRYGKYSNNSLLLQELLVAGTDTSALATQWTMAELINNPTILERLREEIESVVGNTRLIQETDLSNLPYLQSVVKEGLRLHPPASISVRMSQERCELGGFYIPEKTLLVVNTYAIMRDPNFWEDPEEFKPERFITSSRSEQEDEMREEVLKYIPFSAGRRGCPGSNLAYVSLGIAIGVMVQCFDWRIKGEKVNMSETAGTIMLAMAQPLKCTPVPRTLNLLPSSLHIPSS", "length": 348 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J311-1", "protein_name": "Zinc finger (C2H2 type) family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLDGVELLLDLREMVSQSGFEKSTTCSGVIALRSNLQSKSSHKCKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYECKVCGKIFGCYRGLGGHTKLHRSTKRELASTQDENSLLDSSEAKKIVSQPSSFKVSQEEKFLHCVELKQDFSEPLSHSGALPSTLRSKLQTKTQWKSSCHCKICGKSFVCSQGLGNHKRVHREISGKLACKRKYTEDYNPFSDSLKAKKIVKKPSSFEVSQEEKILHCVELKQDFGELLAHSGFDKSISCSKSIKVKKVARKNEKTEDSTSLFGVFVGEMSQRLHGCKTCGRKFGTLKGVYGHQRMHSGNHNRIEDENGLERIWGLKKKSRVCSVSAFDRFKGSSFMAEIEKHEVIEAALNLVMLCQGVYDFASISNLPLGDGFMDLELKPCPLRRKLQKKSRSSYKCSICEKSFVCSQALGSHQRLHRWKLVPKPEYIEDDSSLLDSSEAKKIVSKPSSFEHAQEEKILQCVEPKLEFHEQLAHSGFDKFDTCSKIRFSALPSPPEAKKIVSQPPSFEVSVDEKILYRAEPKLNFSEPLAHSCFDNSSSYRSIICGKSFVCSQALGGHQTLHRSIKGQLAGTEDGNSLSVTDSEASKIVAQPSSYKSQGI", "length": 650 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JLV4-1", "protein_name": "Protease inhibitor/seed storage/lipid transfer protein (LTP) family protein", "gene_name": "DHYPRP1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASTTIILFLSFSIIPLLTIVRADNHSVYCPPPPPCICICNPGPPPPQPDPQPPTPPTFQPAPPANDQPPPPPQSTSPPPVATTPPALPPKPLPPPLSPPQTTPPPPPAITPPPPPAITPPLSPPPPAITPPPPLATTPPALPPKPLPPPLSPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIIRNVSDLDAVTCFCKSVGAPRFSLSPNFGIFFKVCGRRIPQGFSCPGPSPTISPPPLPPQTLKPPPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIVRNVSDLDAVTCFCKSVGARRFSLSPNFGIFFKVCGRRIPQGFSCP", "length": 375 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K5R6-1", "protein_name": "Cell division cycle 20.6, cofactor of APC complex", "gene_name": "CDC20-6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MMKSIALALCLTHHSPMVLSIVDYGDSQEKTIDSLWKKPHGSDLTWSGFSRVGVTEAYFAVPVDHFLTNPPSLRLSQTIYCRRGSSYVETEKVEEEDRDDFLKQVWFLTDNLVFFFVDIEEYIVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHESRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKKAASKKYTEPFAHVNHIR", "length": 428 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F5H284-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4D", "gene_name": "PPIAL4D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEATEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "F6R3J9-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1G", "gene_name": "Speer1g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNKKNKEVEIDWALIEKYLVDLNLNGQTGADQQP", "length": 157 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6X687-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1A", "gene_name": "Speer1a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKQSSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMPVTQNQKNKEVEIDWALIEKYLVDLNLNGRTGADQQP", "length": 157 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6YNI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRCRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILVGLQDYQDNKADVILKYNLDEARSLKAYGELQEHAKINETDTFGPGDDDEIVFDDTGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7AMQ8-1", "protein_name": "Exocrine gland secreted peptide 8", "gene_name": "Esp8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKVSAMTSFPVMLFLIILLLPSICSEERTQADPTISADNKKNFKTVVDLTDCQCERNFIESLESTLPASNQDQTLFENMTNQHKLNLSKMLSVLSKCCTQKQQVDTVHFRRMPHRIQSTKQNNYKKQVLYPMQEFMNLTRDVLVSRYV", "length": 149 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7C9P2-1", "protein_name": "F-box and WD-40 domain protein 25", "gene_name": "Fbxw25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSLPMLKILSYLDAYNLLQAAQVNKNWNALASSDVLWRKLCQRRWHYCDMVTLQLQGKETWKQFFIYRIWQEHAKTRAKPEDFTYKEIPVECGFYGYACYISGHGLTRNGQGKSVICMVSSKNTISTWDIHKSVITWVSPVQPASINLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLVGDTLGNLYIFRIPDLHLISTVNVFPYGFDEIDCSPQKKWVLLSKNYPHILPKVFYMSSLLRTSEFSAPVSTILEFSLCQGAFWTPRREDRITLMSRSGFPQITKFETFDMKLEGIGNKVAVQGKLIASFFLPYYEESPNWIGVSDKDVIVCSTHFFLLLFTINGLHLQTFQYCPETIVRLCVDPVHVIVTCNNGSLDVYAWEERSLLLRKCYRLQNKRPLPLYGFINNLLCDDVSIVQLMRDGHGPYSLIAYALNICS", "length": 466 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7ELE5-1", "protein_name": "NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial", "gene_name": "Ndufs7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RRTVVYTARARSQEKSGSEPLSLWFRFPLVSIWALDQNRNSLEDGPQRLSEGRGQDGGAGGSWLALCTDPGSAHRHSGSAAQSPPECGSHWEPEQSAVSKAGAGAVVPKPSHLPRSRAEYVVTKLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQADVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIKREQKLKIWYRR", "length": 271 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7F947-1", "protein_name": "Beta-defensin-like domain-containing protein", "gene_name": "Spag11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLSQRPPNVFRHVVDFLKKNQTHITQACSGNSGGRKASSSDLCGCALCLEAPSPHSQLSYKRACSSCPPTRGSSVPAVPSTAMKQRLLPSFVNLLLAALLLPGKAETWLRSWTQALSAVVTLGSSSASSINHLVTEPPSSPQDEFPAQGGNGSGLLHHRVKRFPPRTPPYHEPGPNYQIVNCKKNEGFCQKYCNFMETQVGYCSKKKEACCLHPF", "length": 216 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7FNC4-1", "protein_name": "Interleukin 36, gamma", "gene_name": "Il36g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSKYPHSPCTASGKETPDLGQVSDVDQQVWIFRDQALVTVPRSHTVTPVTVTVLPCKYPESLEQGKGTPIYLGIQNPDKCLFCKEVNGHPTLLLKEEKILNLYHHPEPMKPFLFYHTLTGATSTFESVVFPGSFIASSKIGKPIFLTSKKGEHYNIHFSLDII", "length": 164 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F8VPX6-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A1", "gene_name": "Speer4a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVNGRETREGRKDANLPPESNEGRRRWTWRMWMAHRQTTSSVPVTSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHNLEMENMEARENKQEFKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQERLVELNLSCKDEQEKTSNLETQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHTQNPPSSSDESSSDESSYSTCPAWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F8VQM2-1", "protein_name": "C-C motif chemokine ligand 26", "gene_name": "Ccl26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFFDLGLLVLLAIFLSVQLGVATCGSSIAMSCCPNFSYYVIPWSWVYSYKFTDKSCTSDGVIFFTKTGKQFCVQPGAKWVQRFISLVNTRNHL", "length": 93 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3GSG1-1", "protein_name": "Ferritin", "gene_name": "LOC100767129", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGFLRKSHRRQRHRCPLRVSRATVAYPLVFMTPPIISPPSQVRQNYHFDCKTAVNNHVQLQLHNSSVYLAMAFYFDSEDVAQKNLASFFLNKSHECTAQAEMFLELQNQRGGRISLGSIREADRNNWLGGLQAMECALQLELSTNQSLVALHQLASSKSDAHLCSFLKNHFLTKQVEVLKEISGYVTKLRQMGSPDDGIAEYLFGKLTLDDNKGK", "length": 215 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3GWA3-1", "protein_name": "60S ribosomal protein L18a", "gene_name": "LOC100764432", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKASGTLREYKVVGRCLLTPKCHTPPLYLMRIFALNHVVAKSRFWSQLKKMKSSGEIVHCGEVRPEVPLQVKNFAIWLHYDSRNGTYNMCREYWDLTVTQCYRDMGAQHCARTHCIHIMKVEEIASGKCQRPAVKQFHDSKIKFLLPHRVLRCQHKPHFTTKRLNTFF", "length": 168 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H156-1", "protein_name": "Prefoldin subunit 4", "gene_name": "LOC100773780", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MVATMKKAAAEDVNVTFEDQQKINKFARDTSRITEQKEIEVKKNHLQNLEDTFNDIMLADGDCFMTQYLIRDVLISHSQEEAQEMLEEAKKTLQEEIDALESRVGAIQWVLANLKVQLYTKFGSNINLGVDES", "length": 133 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H2T6-1", "protein_name": "Histone H4", "gene_name": "LOC100757199", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H8X2-1", "protein_name": "1-acyl-sn-glycerol-3-phosphate acyltransferase gamma", "gene_name": "Agpat3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGLLAYLKTQFVVHLLIGFVFVVSGLVINFTQLCTLALWPISKQLYRRINCRLAYSLWSQLVMLLEWWSCTECTLFTDQATVDHFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKVLAKRELLCVPLIGWTWYFLEIVFCKRKWEEDRDIVKEGLQCLSDYPEYMWFLLYCEGTRFTETKHRISMEVAASKGLPPLKYHLLPRTKGFTTTVQCLRGTVAAIYDVTLNFRGSKNPSLLGILYGKKYEADMCVRRFPLEDIPADENDAAQWLHKLYQEKDALQEMYKQKGVFPGEPIKPARRPWTLLNFLCWATILLSPLISFVLGVFASGSPLLILTFLGFVGAASFGVRRLIGVTEIEKGSSYGNQELKKKE", "length": 376 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HAB3-1", "protein_name": "40S ribosomal protein S15", "gene_name": "LOC100759804", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAEVEQKKKRTFRKFTYCGVDLDQLLDMSCEQLMQLCSTRQRLLLNCSLWRKQHSLLKSLRKAKKKVPPMEKPEVGKTHLRDMIILPEMAGSMVDVYNGKTFNQVEIKPKMIGHYLGEFSITYKPVKHGGPGVGATHSSRFIPLK", "length": 145 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDI6-1", "protein_name": "Lipid transferase CIDEB", "gene_name": "Cideb", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEYLSALNPNGLLRSVSTMGSELGRRVWNSGPPPQRPFRVCDHKRTVRKGLTAATRQELLDKVLETLLLSGVLTLVLEEDGTAVESEDFFQMLEDDTCLMALERGQSWSPRSGMLSYGLGREKPKHSQDIARITFDVYKQNPRDLFGSLNVKATFYGLYSMSCDFQGVGPKKVLRELLRWTSSLLQGLGHMLLGISSTLRHVVEGAERWQWHKQNHLRS", "length": 219 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDS5-1", "protein_name": "Histone H3", "gene_name": "LOC100773314", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HGI3-1", "protein_name": "PHD finger protein 6", "gene_name": "Phf6", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLVSENQKVAAHHKCMLFSSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEETFNEHELEPSSPKTKKKSRKGRPRKTNFKGLTEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEETEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGRLAIDQQLTQQQLNGN", "length": 364 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HJW3-1", "protein_name": "Calcium homeostasis modulator protein 6-like", "gene_name": "LOC100774768", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEKFKAVLDLQSKHRSALGYGLVTLLTAGGEKIFSEVVFQCPCSATWNLPYGLVFLLVPALALFLLGYALRTRTWRLLTGCCSWSASAQSSSGLQRVFVCAQISAAAALPPLTWVAVALLGGSFYQCAVSGSEAMARHLCKGRDPSCAAKLPQVPCKKQEAEMQDILSQLKAQSQVLGWILIAAIIILLLVVKSVTRCLSPVSYLQLKFWEIYLEKERQILQGEAMEHATQLAKENVRCFFDCTNPKDCSTPSSKAWQQISALYTFNPKNHFYSMLHKYVNRKDMSGSLRSVEGDAVVPVLGFVDASGMATTHGV", "length": 315 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQ40-1", "protein_name": "Eukaryotic peptide chain release factor GTP-binding subunit ERF3B", "gene_name": "LOC100767578", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDLGSSSDSAPDCWDQVDMEVPGSAPSGDGFTSASTAAAEAAEAEAQRQHLSMAFSSQLNIHAKPFVPRVSAAEFVQSFLPGSAQPPAPTTSSSDETCTGAGDPQGKRLGWGAPVEPSKDGPLMSWEGSNSAVTMELSEPVVENGEVEMALEESWELKEVSEAKPGGSLGDSGPPEESGKEMMEEKEVIRKSKSMAIPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDRRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKYLIVLINKMDDPTVDWSSERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDSLPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGIVSDDAETDFVAPGENLKIRLKGIEEEEILPGFILCEPSNLCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD", "length": 631 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQN5-1", "protein_name": "Transcription factor 19 isoform X1", "gene_name": "Tcf19", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLPCFQLLRIGGGRGGDLYTFHPPSRSGCTYRLGCRADLCDVALRPQQEPGLISGVHALLHAELQGDDWRVSLEDHSSQGTLVNNVRLPRGHRLELSDGDLLTFGPEGQAGTSSSEFYFMFQQVRVKPQDFAAITVPRSRGEAGTGFQPMVPSQGAPQRPLSTLSSAPKATLILNSIGSLSKLQPQPLTFSRGGGRPQSLAVPTQPGEVGASPPAPPTRNRRKSVHRVLAELDDENETSLSPLSVLMEPRKKLRLEKAALVSSGRD", "length": 266 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HWQ5-1", "protein_name": "Zinc finger protein 219", "gene_name": "Znf219", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEGSRPRILVGHLEPSPPAFDGELDLQHYSNGPGVSTGSPGMGAVGWSETRAGERRFPCPVCGKRFRFNSILALHLRAHPGAQAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLLLELEERALLREAQLGRARSSGGMQATPATEGLARPQVPSSSAFPCPFCKGKFRTSAERERHLHILHRPWKCSLCSFGSSQEEELLHHSLTAHGASERPLAATSTPEPQPPPQPEPRSALEPEPEPEPRPEPEHEANPAPTPAPPEEPPAPPEFRCQVCGQSFTQSWFLKGHMRKHKASFDHACPVCGRCFKEPWFLKNHMKVHTSKLGPLRAPGPGSTPARAPQPPDMSLLAYEPLGPALLLAPAPTPAERREPPSLLGYLSVRAGEVRPNGEGADPGAGRSYGGGFRPLPSALPNRARRHRTEEPEEEEEVVEAEEESWARGRSLGTLTSLHPHPGEGSGQSAPAVGAQARPTGTQEENGLLVGGARSEAGRGATGKDCPFCGKSFRSAHHLKVHLRVHTGERPYKCPHCDYAGTQSGSLKYHLQRHHREQRSSAGPGPPPEPPPPSPRGAASLQPQSGAKPTQASATWVEGTASTRPSSSGTGAGSRRKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGSGGALHRCLFCPFATGAPELMALHLQVHHSRRARGRRQPRADTSPPYVRAPSGETPPSPPLEEEGSPGLSRSGEAGLGGQER", "length": 725 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I071-1", "protein_name": "Large ribosomal subunit protein uL29", "gene_name": "LOC100753244", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAKIKARDLRGKKEELLKQLDDLKVELSQLRVAKVTGSAASKLSKIRVVQKSIVRVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMHRQLTKHEEKLKTKKQQRKERLYPLRKYAFKA", "length": 122 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I1Z3-1", "protein_name": "DNA damage-inducible transcript 4 protein", "gene_name": "Ddit4", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MPSLWDRFSSSSSSSSSSSSGTPATDRPPRSAWGSAAREEGLDRCASLESSDCESLDSSNSGFGPEEDSSYLDGVSLPDFELLSDPEDEHLCANLMQLLQESLSQARLGSRRPARLLMPSQLVSQVGKELLRLAYSEPCGLRGALLDVCVEQGKSCHSVAQLALDPSLVPTFQLTLVLRLDSRLWPKIQGLLSSANSSLVPGYSQSLTLSTGFRVIKKKLYSSEQLLIEEC", "length": 231 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IAH8-1", "protein_name": "Guanine nucleotide-binding protein subunit gamma", "gene_name": "LOC100755128", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASNNTASIAQARKLVEQLKMEANIDRIKLSKAAADLMACCAAHAKEDPLLTPVPASENPFREKSFCTIL", "length": 70 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IG76-1", "protein_name": "Olfactory receptor 7E24 isoform X2", "gene_name": "LOC100765597", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYILALFGNLLIILTVSSDSHLHTPMYFFLSNLSMIDIGYISTTVPRVIVDIQTHCPVISYVGCLTQMSLIIIFACMDDMLLSVMAYDRFVAICHPLYYQVIMNPSSCGVLLLGSFLLSLVNLLLHYVAVLSFSNCEDIFEISNFFCGPSELFKLACFDTFTTNIVRYCAGALFGLLPISGIIFSYFKIVSSIMRSSSSSNGKWKTFSTCGSHLSIVCLFYGTALGMYFSSSLSLSPKTNAVASVMYTVVTPMLNPFIYSLRNKDIKTALRKILSRTF", "length": 278 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IGD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100770882", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGANSSSLTPEFFVLNGIPGLEDAHVWISLPFCFMYMIAVVGNCGLMYLIGHEEALHRPMYYFLTLLSFTDITLCTTTVPNTLCIFWFNLKKIGFKACLAQMFFVHTFTATESGMLMLMALDRYVAICYPLRYGTILTNPVIAKASLATFLRSVAFILPFTFLTKRLPYCRGNTIPHAYCDHMSVAKISCGNVKVNAIYGLLVALVVCAFDIFCITVSYTMILRAVMNLSSADARHKAFSTCTSHICAIVITYVPAFFNFFTHRFGGHTIPHHIHIIVANLYLLLPATMNPIVYGVKTKQIRESVIKFFSGDKSGITEIKGLQNK", "length": 326 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3INQ1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100763177", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MFCNTSTPGHSTFLLTGFPGLEASHHWVSIPINLICVVSILGNSIILFLIRTDPALHEPMYIFLSMLAASDLGLCASTFPTMVRLFWLGIRELPFDLCAAQMFFIHAFTYVESGVLLAMAFDRFIAIRDPLHYATILPHSAVAKVGAAVLIRAILLNLPGPILLRRLLFPQVSVLSHCYCLHCDLVGLACSDTRINSLVGLVSILLSLGLDSSLIMLSYVLILRTVLSIASPGERLKALNTCVSHLCIVLIFYLPKLGLSVLHRVEKHSYPALAVLMANLHFLVPPFMNPVVYCIKSKQIRQGFLKRFQQKRVDVS", "length": 316 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3MYE2-1", "protein_name": "Large ribosomal subunit protein uL18", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGFVKVVKNKAYFKRYQVKFRRRQEGKTDYYARKRLVIQDKNKYNTPKYRMIICVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAVAYCTGLLLACRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGALTCYLDAGLARTTTGNKFFGALKGAVDGGLSIPHSTKQFPGYDSESKEFSAEVHRKHIMGQNVADYMRYLTEDEDAYKKQFSQYIKNNVTPDMEEMYKKAHAAIRENPVYEKKPKKEVKKKRWNRPKMSLGQENDRVAQKKASFLRAQERAAES", "length": 295 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3MZM9-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC107131211", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELRRRLLIIVIGTLITGYMVTCTCLLHYRCDSKEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3UW31-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r176", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVTLQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQFVTLAPGTWGRVMLPGRAPNFLRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDSNSKSKWVCSTSGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFVDSRVWLRRVKEILSVSFPTFSPLLLIFRDPKDPCSLLFGC", "length": 304 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3UY92-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r158", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQLLLLCQFGVGTVAKVFLFVRNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVARSTNLCSTCVLSFHQFVTLVPLNRGKGKLVLRASVTNMASYSSYSCWFFSVLSNIHIPIKVSGPQIKDNNTDSNRKLFCSTSGFSVGTVLLQFAYDATFMSIMVWASVSMVLLLHRHRQRMQHILTPNQDARGQAESRATRTILMLVVTFVSFYLLNFICIMLHALFMHSHFFVRLVSEILTAVFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3V9M0-1", "protein_name": "Cystatin S like 1", "gene_name": "Cyssl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MACLLYTQLFLLNTFILFLNLSLNPVLGQILAGIEKSIIEEEGALEALNFAVSEYNENNSDLYLSRVVEVKTVKTVQQQIEAGKTLLFDVILGKTACLKTQDDLSDCPLNEPTDLQEREFCSFEVHLPDWANAINLLSSICNRI", "length": 144 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3X693-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "RVFLPLLLLGVILPGGDNEDGPTSFHLIQISTFVNNTWAQNQGSGWLDDLQIHGWESDSGTAIFLKPWSKGNFSDDEVTELVDLFRAYFIGFTREVQDRVNEFQLEYPFVIQVTAGCELHSGEAIESSLRGALGGLDFVSIQNHSCVPAPDGSSRGQKFCALTTQYQGISDIIERLLSETCPRYLLGVLDAGKAELQRQVKPEAWLSSGPTPGPGRLLLVCHVSGFYPKPVRVMWMRGEQEQPGTQQGDLMPIGEAAGLNCRVKHSSLGDQDIILYWGHPTSIGLILVAIIVPSLILLICLAFGVLRFMGSHRIGHD", "length": 317 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3X9Q9-1", "protein_name": "Predicted gene 6526", "gene_name": "Gm6526", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGDQGETRPRQKESAIPSCKKRRMKSFWGRHMSAGKKSSQNCNITNHMKNMNKLEDMKFYIRKINAKRLELFPILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKMTQSISDTIETYKEFIEDKDSYSFTHSYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEEKRFCDESSKNIHPKC", "length": 198 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G5E8X8-1", "protein_name": "Oocyte maturation, alpha", "gene_name": "Omt2a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTLVFTKVHLESWVYKGLRGQHDSILELLKENLHHYLCIEFDEGLNDTVVYIIGFKFFAMFAMFVIVSLACNLRTKRNRARAWARGLQSPVWWNRRYFI", "length": 100 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ46-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLSFMSSLLENILYFQAGLGVLANIFLLVFYIFIILGHRPKPMDLISCQLTFVHIMMFLAGENFWLANIFESLNVENDFKCKATFYTKRVMRGLSICITCLLSVFQAVMISHRNSLLAKFKHKLKIYMINALFYIWTFNLSLSSNLIFYVGGFTNMSQTKQLKVTKSCSLIPMNYIIRGLILTVISSRDMFLVGVMLTTSTYMVIILCRHQRQCKHLHSTSHLRASPEKRATQTILLLVVFFVIMYWVDFIISSTSILLWMYDPVIMIVQKFVVNAYPAITPFVQISSDTRVIRVVKNWHS", "length": 303 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ88-1", "protein_name": "Vomeronasal 2, receptor 3", "gene_name": "Vmn2r3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMAIRKKCLILELTVFLCVELYAQYEDQNMTCRLMRKFNLTGYVEAENHHFVIGGQFPVHYRTIPTSDSDEEPESPMCEGFNFRGFRWMKTMIHTIKEINERKDILPEHTLGYQIFDNCFSTTKAMESSMVFLTGQDEYKPKWRNSTGKYLIGIIGAGGSTMSLAGARILLLNDVVQVGYASSSSILTEYLNVYRTIPSDKFQTEAIVNLIRHFGWVWIGAIASDDDYGKHGVKSFRKILETNNLCIAFSETIPKVYSNEKMQIAIDAVKSSTAKVIVLYATDFDLSPFVLEVIHHNIAHRTWIATEAWITSALIAKPEYFPYFGGTIGFAIPRSVIPGLKEFLYDVHPSKDPNDVLTIEFWQTAFNCTWPNSSVPYNVDHRVNMTGKEDRLYDMSDHLCTGKEKLKDLKNTYLDTSQLRITNNVRQAVYLMAYGLDRLIRVLIKEYREYLLHPKILAFMSYKLFEYIRKVKFTTHDGRKIELNVHGDIENGYYDILNWQMDNTGDIAIVKVGEYKFTRSKYELVLPKNSTLFWNTESSRLPDSVCTKVCPPGTRKGFITGQPVCCFDCIPCEDGYVSEKPGQRLCNPCSEDDWSNAEKNKCVPKHVEFLAYEEALGFTLVILSIFGALVVLAVTVVYVIHRHTPLVKANDRELSFLIQISLVITVLSTMLFIGKPCNWSCMARQVTLALGFCLCLSSILGKTISLFFAYRISISKTQLISMHPSFRKLIVLLCVFGEIGVCASYLVLKPPSMFKNIERQNVKIIFECNEGSVEFLCSIFGFDVLLALLCFVTTFMARQLPDNYYEGKCITFGMLFFFIVWISFVPAYLSTKGKFKVAVEIFAILASSYGLLGCLFLPKCFIILLRPKRNTDETVGGRVPTVDRSIQLTSASVSSELNSTMVSTVLDE", "length": 909 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BKT1-1", "protein_name": "piRNA-mediated silencing protein C19orf84 homolog", "gene_name": "Gm52993", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDELEDGALSNGDNLSLPSAGTESWPTSATPGLPPSLLSTLDPTHLGLPEQLASVTVPIRLDTLSYLLHSALLGTYNLQQSLPPCSCTAQPSHIWPDTVRRPPRRSGQARGGWEVRRRPSRGWGRGRGRGRVWAQSQRGPERAEERERNMAGEPGAGPSTPPVTPPSQDGQKEAGGLSEDWEADY", "length": 185 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BLP0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLTNILYFQAGLGILANTFLLCFYTFTILCHRSKPMDLTSCQLTLAHILFLLAGGDNWLAVILESLNIENDFKCKAIFYTNRVMRGFSICITCLLSVFQAVTISPHTSLLAKFKHKLKTYIIYAVFYIWFYNFLVCSHLLVYVGGFNNVSETNQMRVTESCSLFLMNYIISGLIFTVTTFRDVFLVGVMLITNAYIVIILFRHQRHCKHLHSIRHLRVSPEKRATQTILLLMVFFVVMYWVEIIISSTSLLLWMYDPGFLTVQKLIVTVYPTITPLVQISSDKRVINVLKNLQSKCQQIF", "length": 302 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "I3ITL1-1", "protein_name": "Gap junction protein", "gene_name": "gjc4a.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSWDFLTHLLDEISNHSTFVGKIWLTLLIVFRIVLTVVGGETIYDDEQSEFVCNTLQPGCKNVCYDAFAPLSHVRFWVFQIIMISTPSVMYLGFAMHKIARMADNEYQPRKHKMLSTVHQRMNRDYDMVDEMTEEVPMIPEEIEPSEKDNKSAASTKTTAASDAAVKHDGRRRIKRDGLMKVYVLQLISRVAFEIAFLFGQCILYGFEVSPSYICTRSPCPHTVDCFVSRPTEKTIFLLIMYVVSVLCLALTVLEILHLGIGGLRDSFRSRANRRLPVHRPSTSTICHRLSSAPPGYQAVQKKYSSGKLKAEFLSDSGRESLADDNTTRDLDRLRRHLKIAQQHLDQAYHTEEVGASHNSGPDSKSIAAEQNRLNQAQGGFGSTEEKVFKEAHA", "length": 394 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "I3L8A5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "FPSRQERTMRRENQSSISEFLLLGLPIPPEQQGVFFALFLGMYLTTMLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFSSVTVPKMLMNMQTQDQSIPYAGCVTQMYFFMFFACLDNFLLTSMAYDRYVAICHPLRYTSIMRGGLCTLLVTVSWILSCANALCHTLLLAQLSICAENTIPNFFCDLGALLKLSCSDTSFNDLAIFIAGVATIMLPLLCILVSYGHIGATILKIPSTKGICKALSTCGSHLSVVFLYYGTIIGLYLVPSSSTSSHKDIVASVMYTVVTPLLNPFIYTLRNRDMKGALEKLFHKAPVLS", "length": 320 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3L8Z8-1", "protein_name": "LRRC37A/B like protein 1 C-terminal domain-containing protein", "gene_name": "LOC100514982", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MMTLELEKLILPSHMACCLCQFKSNIEVVCKTVKLHCDRCLKNSTRCDKETSLGDVEGSFMKVLQARKKNTSTELMIEPERPSSDKSGVSLSSFMNEQLDFSDESDVISALNYILPYFSEGNLEDVESTLLPFIQLLFSNVAEADIPPGHLKTHTGNPPVNPESGTSGYTNKLRQLRFLENLLDAEIQEKIDEVMKKEKTAMLIYSNILSPKLRRQILRKKLETARTQAESLEEIESVDKRPLKVNRVLKGPRGIKKRHFRAMRRQSIRRKETAQPFVETTTKGSKLGGPSARELEQLWVVQRPRKRVADSLQKEPSFGREHKAEVSSFLKQYSRGRPAASIHPKAPATVKKTSEDLSDTLFVLVDANARVKNRKASETISYPRKIDSFHPSHSPVLHRTPEPQNRQAFRDKGSSYRLLLALRPLSSAVRSLINSPSQEASSPSGELTLQEQPSPESFSPSEPSTEHIISEKDTPQVVFEELPTSGTTTLSGPIPGPTAQGTLPTEYSATTADNVMPTGQHTSAIQWEHHNVGTDVASTPTSFISPGVSSPGSQFEAQLNQQLQSLIPNNDVRRLISHVIRTLKMDCSEPQVQLACAKLISRTGLLMKLLSEQQEAKASKAEWDTDQWKTENYINENTEAQGEQKESSELTKDVPGYGYNNKLILAISVAVVLMLLIVILCLIEVYSRRRTLREGKVGRRRGFFGFLLRKRRSGESESEGFFWRRRPLWLRDTYRPLSATRKKNMAEKLHDKESSDEEEIFHKGAGEVSEAPADVILTIESDVEDLGEETDTAPEGPPE", "length": 799 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LBH4-1", "protein_name": "Large ribosomal subunit protein uL11", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPPKFNPNEIKAMYLRCTSGEISAKSALAPKIGPLGLSPKEVGDDIAKAAGDWKGLRITVKPTIQNRQAQMEVVPSASALIIKAPKELPRDRKKQKNIKHSGNITFDEIVNIARQMRRCSLARELSGTIKEILGTAQSVGCNVNGRRPHDIIDDISSGAVECQAS", "length": 165 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LC12-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFGANLTIFHPTVFILLGMPGLEIYHTWLSIPFCLMSIVAVLGIGALILVVLSESTLHEPMHVFLSMLAGTDNLLSTTTVPKALAIFWFHAGEIAFDACITQMFFIHVAFVAELGILLAMAFDRYVAICALLRYTAVLTPSTIVKLTLAIWGWGIGTIFPIIFLLKRLPYCRTNIIPHSYCEHIGVARLACADITVNIWYGFSVPMASVLVDVAFIAVSYTLILQAVFRLPSQDAQHKALNTCGSHIGVILLFFIPSFFTFLTHRFGKNIPHHIHILLANLYVLIPPMLNPIIYGAKTKQIRDSLAHMLSRVGMS", "length": 315 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LEQ2-1", "protein_name": "All-trans retinoic acid induced differentiation factor", "gene_name": "ATRAID", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARPGFRSPSSLVPRAAALLLVLSVPRALALPEICIQCPGDVQNLSEVALYCKQTPELMLQGRCCLNGKGTILGLDLQNCSLKDPGPDFAQAHTAVIIDLQANPFEGDWANTFRGFTQLQTLILPQGVNCPGGINAWDVVTFYITNQTCQGQRTFATALGTQKRVLRMDLVLLMVLVSCSVFVLMASMATSVCARAHSHCSCSSVFWDPQHYPFPSCFGGLNAEKPRLHEPQRSSY", "length": 236 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "J3QM75-1", "protein_name": "Secretoglobin, family 2B, member 19", "gene_name": "Scgb2b19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLITGELSFQTTEACVPFFEGYASVVSGSRVWLYHELQSFDATAEEKVALEKIQGCYREERLRNILLEPKIMEAMVASPECRSYYSLNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMG8-1", "protein_name": "T cell receptor alpha variable 13N-3", "gene_name": "Trav13n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKRLLCSLLGLLCTQVCWVKGQQVQQSPPASLVLQEGENAELQCTYSTTLNSMQWFYQRPGGRLVSLLYSPSWAEQRGGRLTSSAASNESRSSLHISSSQITDSGTYLCAME", "length": 112 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QML3-1", "protein_name": "BTB domain containing 35, family member 29", "gene_name": "Btbd35f29", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHQGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKKVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDALTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMQ9-1", "protein_name": "Predicted gene, 20873", "gene_name": "Gm20873", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRESSSNTLRNIVGRRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPGLYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANLSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMS5-1", "protein_name": "BTB domain containing 35, family member 2", "gene_name": "Btbd35f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEDIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKKVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW5-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADIILKYSPDEARSLKAYGELPEHAKINEMDTFGAGDDDEIMFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW9-1", "protein_name": "BTB domain containing 35, family member 6", "gene_name": "Btbd35f6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLQTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QN64-1", "protein_name": "BTB domain containing 35, family member 22", "gene_name": "Btbd35f22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QNQ5-1", "protein_name": "BTB domain containing 35, family member 24", "gene_name": "Btbd35f24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKDTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIYDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP08-1", "protein_name": "Histone H2A", "gene_name": "H2al1k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTRSQRGELPLSLVDRFLREEFHSSRLSSSALSFLTSVLEYLTSNILELAGEVAHTTGRKRIAPEDVRLVVQNNEQLRQLFKPGGTSVNEDDN", "length": 105 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP87-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCNIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINETDTFGAGDDDEIVFDDIGDEDEDIDDI", "length": 144 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP96-1", "protein_name": "PRAME like 3C", "gene_name": "Pramel3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMDTKDPPTLLDLATQSLLSNEHAAIQALEEIPRELFVPLFTAAFTGRHKNILTAIVKAWPFACLHIGALSVQEPERELLKALIESLQFLPALNSATRSPKLRILDLRQDAGCKTVCPDISTNSTICFRSCAHSEHSIFKIEGQESLSSSKSEAQPSRLPMELIVDISLDGTLRERNFFALLQNKVEQSLGSLHLCCRDLQINNLCECRHALSHLDLKCVDHLAVDESPLTEVTKLLSHTIQLDSLSLSKIACRSLNGRTFRNFITQLSRMNHLKELSLSSFCLTDHLETVLRVLSADLEFLYLPFCGLSYSDFKFLSECSQVSHLKLLNVNNNPIYWEDCEPFYYLLQNVSSTLQHLKICYCFLTDSTISVLIPALTRCSQLRVLHFYSNQITMGMLMRILELLTPLKELKHVIYPIPVHCYGRWHFQGSLDRQKVEDVQRQLNLMLQEAERSDMNWITYSD", "length": 463 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QPI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLTKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGAGDDDQIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QQ02-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLESMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7GP63-1", "protein_name": "Large ribosomal subunit protein eL39", "gene_name": "RPL39", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL", "length": 51 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "K7N5V5-1", "protein_name": "Predicted gene 5862", "gene_name": "Gm5862", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N660-1", "protein_name": "Predicted gene 10220", "gene_name": "Gm10220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARKLGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPSWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r168", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNGAMKTTEEVALQIVLLCQFGIGTMANILLFVHNFSPLLTGCQLRPKEVICANMAVSSILILFMTVFPNNVFVAQRNLLNDLQCKLEYFVYMVARSTNLCSTCVLSTYQFVTLVPGNFSELMVRGRSPKVISYSCCSCWLFGILYNVYIPMKVSGPQNRHNKTSTKSKWVCFTSGFSVGIVFLSFAHDAIFISIMVWASVSMVRLLYRHYQRLQYIFPPHQGNRGYAEIRAAHSIVLLVVTFVSFYLLHCICFILHIVFVDSNLWLRHIGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYKKPVI", "length": 309 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Gm10670", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANDFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSMHQFVTLVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATNTILMLVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNLKHRRQLH", "length": 321 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6G6-1", "protein_name": "Predicted gene 16440", "gene_name": "Gm16440", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLCQKENGDEGEIRTTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKITKQRSKINELEELKLDMRKISNDMEEMGGILELYIYEDLNYRMNTEFNIIKSQHEKTMLDMNEMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLSEKVRILLNENRKLLVEQAGTQLSHEEEKRFCEEASKNICASSAKEQQCVNSSRNRNMAQTTT", "length": 218 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6J5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r127", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLTAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6P1-1", "protein_name": "Reproductive homeobox 2H", "gene_name": "Rhox2h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKRSINYLLDVGPEEDEENANGVKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGPAAPVAGLMDNSNQEDLSATGCAQEKETQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPKFRHLWRHNFNVLQLQELESIFQCNHYISTTEENRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6T9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r175", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGFGTAVNIFLIVHNLSPILNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCFLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVNGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFLDSRVWLRRVKQILDVSFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6U2-1", "protein_name": "Predicted gene 3542", "gene_name": "Gm3542", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSNITNQISNINKVEELKLHIRKTSNERKEMCGILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRKLLVEQAGTQVSCEEERGSLRRPARTSVPQVQRNSSFPKCETVQQKLEHGTDHDMISLKEKCWWKRTGCAQEIHHCCLSSLITMAVMGCMLLLYFGFLGMNRP", "length": 270 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W5-1", "protein_name": "Predicted gene 17019", "gene_name": "Gm17019", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRDTREGRKDADLPSERNEGRRRWTWRMWMALRQTSSPVPVISKKQFEKEEKKLIKEIQLTTEETNELRDRLIYVTEGSMNKRPYHRQNPLYEKLKLKEKEIMTFLHNLEMENMEAQENKQELKKETHFYRNLHSRLLMEENLIKKKSMTLQQESKEVQADWAIIHQRLVELNLSVKDEQENSNLETPEYQVSEAARELGLATAEEDSILQNELPGQEAPAEHHLQHPQSSSDESSSI", "length": 255 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r170", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGVGTAVNIFLIVHNLSPNLNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHHRLQHIQSTNQKLRVHAESRASHTILMLVVTFVTCYHLDCICTFCNISFLDSQLWLRRVKQILDASFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r94", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVIFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r103", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Y3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSIILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFYIHSRLFIRLVSEVLAAVFPSICLHNGVLLSY", "length": 295 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Z0-1", "protein_name": "Predicted gene 17026", "gene_name": "Gm17026", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "XRSSWVPKQACCPCSSGYFRERIEYTQTPDQGRRRPAAHHGGKGQETTGHGEGSAGAASPQAPTINDQEKRHERLEKLKRELQNIKNARDELQGILANYTNKDLNDRINFETFMLQMQHDQVMTDLKRMPQDISEALYKCKQLTKENQFYCFRNCHLLIESNLIQHKVRMLRKENRQLLREQIALEECNIETKILCKEGSQKIKDHYTKQQQI", "length": 213 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N701-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r159", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMSVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNTRGQAESKATRTILMLVFTFVSFYLLNFICIIFHTLLMHSHFFIRLVSEVLAAVFPSISPFLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N708-1", "protein_name": "Predicted gene 10128", "gene_name": "Gm10340", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSVI", "length": 205 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N731-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r57", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALNILLLCHVVVGTVGNILLFVHNFSPNLTDSRLRPIQVILINLAVANAFMLLFSTYSYDLIDFVPRKPPTDLKCKLAYFFHMVARGTIMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVSYSCFSCWLFSVLNNAYIPMNVSGPQKSHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFLGIMAWTSVSMVIHLNRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCIIILFHITFVESRLSLRHVTKLLSLSFPTISPLLLIFREPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N744-1", "protein_name": "Predicted gene 8104", "gene_name": "Gm8104", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNMNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIDFTIIKSQHEKTMLDMEKMTQSISDTIEKYKEFIEDKDSYSFTHTYLLKECNQLKEKVRMLLNENRKLLVEQADQETSYGEEKRFCDETSKNIHPKC", "length": 198 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N751-1", "protein_name": "Predicted gene 3696", "gene_name": "Gm3696", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPQEHLCPKCQGTAV", "length": 203 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N757-1", "protein_name": "Predicted gene 3667", "gene_name": "Gm3667", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRRLLVEQAGHKCPVGKKRGSLRKPARTSVSQVPRNSSVK", "length": 205 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7F4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r260", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGNSLKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVVRSTNLCSTCVLSVHQFVTLVPLNRGKGKLVLRASVTNMASYSSCSCWFFSVLSNIHIPIKFSGPQITDNNTDSKRKLFCSTSGFSVGIVFLQFAYDATFMSIMVWTSVSMVLLLRRHRQRMQHILTPNQNPRGQAESKATHTILMLVFTFVSFYLLNCICIIVHALFMHSHFFVRLVSEILTAIFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r163", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVMTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLKFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPNICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r242", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7H2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r256", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILGHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSLLVARSTNLCSTCVLSIHQFFTLFPVSRGKGKLILRASVQNLASYSFYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDDTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATHTILMLVFTFVSFYLLNCICIIFHAFSIHSCLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9JA28-1", "protein_name": "Interferon lambda receptor 1", "gene_name": "IFNLR1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWRIRVLATLCFLWQPRVHGQLPPPQNVTLLSKDFDMILTWTPGEGSPPDVLYTVRYESKTRMDKWIKVPHCRNIHSVSCNLTCVIPNFFIKFRAQVKATSGRFHSPWVKSQFKEYHLDVELAPPLLNVNVKENVIHVNATFPMAICVESLPWMYDFNLWEAGSEDKKQYKSIFRKKAVTIDTTALRGNYCFNARSSIQSIDFKHSKFSQPVCMQLNYEGEWKFPFSATIPVFVLLILLTSASIIWLLKQDAKHKKMPQTLDLSNCKIAGPTFCCELRENEFLTDCLICTDKPMSQGKKNKTLAQNNQMWMASFLPSSSSEEEEEEEEEDSSSFIPYTEMLQFPRKHFNFQTPRTADAETILDSTSGVLSVVGGSTLDLSALGFSFFPIRKNEMDTSGSQGNEKASHSHSSSLGRISLTDVRFPGPREHGQHGTDSNDCLEVSLLHTLMNSSCTRLPADEHCLYKKDHDFTICYQKPTLDQPVQVSENPLLNEDPSMEKFIYLQTLQVAEDEGFASDCDSGNFTEGTPPASTVLSDELRISDMEKRYDKKFKFKGYQHSHYMRRS", "length": 567 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "L7MU37-1", "protein_name": "Reproductive homeobox 3H", "gene_name": "Rhox3h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDSTQGTKVLPAEESRNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU51-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a76", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQSNNVTEFVLLGFTQDPAGQKALSVMFSLIYIVTMVGNLLIVGTVIASPSLGSPMYFFLASLSLMDAIYSTAITPKLIVDLLCEKKTISFRACISQLFIDHLFGGVDIVILLAMAYDRYVAICKPLHYLIIMNRRVCILFLVMAWAGGLAHALFQVLAVYNFPFCGPNIIDHFGCDIYPLLLLACTDTYFLGLSIIGNNGAMCIVIFTLLLLSYGIILRFLKNHSQEGRRKALSTCGSHITVVFLFFVPCIFMYVRPVSSFPIDKFITVIYTIVTPMLNPLIYTLRNSEMKNSMEKLLQKTLSPSRIRLSSCCLCY", "length": 318 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU81-1", "protein_name": "BTB domain containing 35, family member 17", "gene_name": "Btbd35f17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANTWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU83-1", "protein_name": "BTB domain containing 35, family member 18", "gene_name": "Btbd35f18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDQVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MUB9-1", "protein_name": "Reproductive homeobox 2G", "gene_name": "Rhox2g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGLAAPVADLMDNNNQEDLGATGCAQEKEKQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPEFLHGWQQSFNVLQLQELESIFQCNHYISTTEAKCLARSMGVSKATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X6-1", "protein_name": "F-box/WD repeat-containing protein 15", "gene_name": "Fbxw15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAIHLPCLPMMKILSYLDAYSLLQAAQVNKDWNELASSDVLWRKLCQKRWLYCDMDTLQLQGKETWKQFFIDRIWQERAKFRAKAKDFTYKEIPLMCGLFGYACYISGCGLTRKGQDKSVVCMVNSKNTISTWDVHKSVITWKSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNNLKSPCKSLKAVFTKDGPIVLIGDTLGNIHIFRIPDLYLISTVNVLPYGFDGIYCSPQKKWVLLSKKHPHILPKVFYMSSFLRTSEFSAPVSTVLKLSLYERVFWTPRREDRITLMSRSGFPQVKMFETYDIKLEEFGNKRIVKGKLIASFELQCHKVNPQRFGVSDKNVIVCSTESSLLLFDINGLRLKTFQYCPEMIVKLSVDPLHVIVICNTGSMDVYAWEERSLLLRKCYRLHIERPLPLYGFIYKAACDDVSIIQLITDELSLSSLTSYALNICS", "length": 466 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X9-1", "protein_name": "Demilune cell and parotid protein 1", "gene_name": "Dcpp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSAPEGKNITSIRVFLKGRLIVGIQLNYDDNKDGQVYGSTAGKEMVARLSKEEHIIAAQGTYTPSALTQIIFTTNQPRQLMVGYYVGNSEYSSFPNDPSHVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 171 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y3-1", "protein_name": "PRAME like 51", "gene_name": "Pramel51", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIHSKERKYRLGLLEPGVTAFPCPNMVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSPGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFTLGDSEKLDEETIFSLISQLPTLHCLQKLYINDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPFCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELVSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPIECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVEL", "length": 520 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y5-1", "protein_name": "Olfactory receptor", "gene_name": "Or11g25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLSSPSNSSTITGFILLGFAYPREGQILLFVIFFIVYILILMGNASIICAVYCDQRLHTPMYLLLANFSFMEIGYVTSTVPNMLANFLSDTKVISFSGCFLQFYFFFSFGSTECFFLAVMAFDRYLAICRPLHYSSLMTGRLRNTLVTSCWVLGFLWFPVPIIIISQMSFCGSRIIDHFLCDPGPLLALACSRVPLIEVFWSIIMSMLLVIPFLFIMGTYILVLRAVFRLPSREGQKKAFSTCGSHLTVVSLFYCSVMIMYLSPTSEHEAGMQKLVTLFYSVGTPLLNPMIYSLRNKDMKNALQKILRT", "length": 311 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N227-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r125", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSMKTTEEVALQIILLCQFGIGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFARKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N255-1", "protein_name": "Predicted gene 3099", "gene_name": "Gm3099", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCLKGNGDEGETRPKKKEEGILSHEKGRRKLFWRRHRSARNTSTQNSNITNQISNINEVEELKLHIRKISNERKEMCEILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMTQFIIGSMQYSMELIEDNYSYSIKEDHLLRECTQLNKKVRILLNENRKLLVEQAGTQVSCGEEKRFCEEASKNICASSAKEQQLP", "length": 205 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N259-1", "protein_name": "Demilune cell and parotid protein 3", "gene_name": "Dcpp3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSTPEEKNITSIRVFLQARSIVGIQFNYDDKDGQVYGSTAGKEMVARLSKEEHITGVEGSYSPSALTQIVFTTTQPRQLMVGYHVGIYQYSSYPDDPSFVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 170 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N270-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVIFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N273-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r118", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSVHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N275-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r169", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVALQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLHGRAPKFVRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKSKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSPNQKLRFHAETRAAHTILMLVVTFVTCYLLDCICTSLHISFVDSRVWLRRVKEILAVSFPTFSPLLLIFRDPKDPCSLPFSC", "length": 304 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N288-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r151", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQILLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2A6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r116", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVFLSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2B4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLGAVFPNICPLLLIFRDPKDPFSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2C2-1", "protein_name": "Predicted gene 2974", "gene_name": "Gm2974", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKERRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N474-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1E", "gene_name": "Speer1e", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "ARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNQKNKEVEIDWALIEKYLVDVNLNGRTGADQQP", "length": 154 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0QWR4-1", "protein_name": "Aly/REF export factor family member 14", "gene_name": "Alyreffm17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADKMDMSLEDIIKLTKIQQRRHDRPDSRVNRGTGSKRYRPAFTHGGRNRLAPYCRPKQLPDKWQHDLFIGGFRGQNHVDTGGKLFLSNLHFGVSDADIQLLFAEFGTLKKSAVHYDRCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQLATSQIDRQGRPAQSKNRGGMTRNPGSGVLSGGGTKKWTLGGSQGRGRGTIRNSKLQQQQQQQKQKQQQQQQKQQQKQQQKQQQQLSAEELDAQLDAYQEMMDTS", "length": 261 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0R3T3-1", "protein_name": "Peptidase S1 domain-containing protein", "gene_name": "ENSRNOG00000067174", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRFLVLCLILSLGDYGAFPLIQSRIHRGCKGERHSQPWQVAMYHYDKAVGWGWHPSPTTMSTSPSHNKVRLGQHSLDADGDTGQDVPVRHSIPHPLYNRSLQMPTFLSPDADNSHNLMLRQLREPANTTEAVRVTEEPTEEAKLGSRCLASGWGSTRPDKCMPGMLQCVDLTLMSSDVCTYAYSQRVTESMLCAGHQEGSRDTCMGDSGTTLICDRMLQGITSWGGNPCA", "length": 230 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R777-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASKSKEKTLGSHYKILSYLGQGSFGTVNLAWHLKTQALVAIKMLEISKETISSILSERAILETLHHPNIIRLFQVLITSSHVNFVLEYAPGGSLFELIKEGGPLQEEVAKKIFGQTVSAVKYCHNLDIVHRDIKPQNILTDAEGNGKLTDFGLATKFRPGTLLKELCGTKEFYAPELVLREPYNGKKTDVWSLGVLLYFISTGYCPFRGVTTKDMEKKIATGTYTIPTYFSGQLENLIHQILTVSPEMRPSIEDIEKHPWVRKCEVNIPTITCPDYKIVEMLCGMGYNANKILESLQKKKYDEPMAAYLILKDKVRQEIEHGTTTSDMPVDQGPLPPQSPAHHSVSGLPLKRRASEPNFGLLHIWPPGEQVARHNVARSVSMPPIALYGTKKQNSTSTSALHSRPVASPCVCNTILEIEIPLPTKQDFDMKTSSPPQRIGYFQRLCQRIRDCLSRLCCFLWAPKVHSPRKWLP", "length": 474 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9M1-1", "protein_name": "Olfactory receptor family 52 subfamily N member 1B", "gene_name": "Or52n1b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLLNVSSLTPASLILNGIPGLEEVNLCIFFPLFTMYSIALTGNFGLIYLIYSEEVLHRPMYIFLALLSFTDVLMCTSTIPNTLFISWFNFKKIDFKACLAQMFFVHTFTGMESGVLVLMVLDLYIAMCYPLRYATILTNVVIAKAGMLTFLRGVALVIPFIFLTKRFPYCKGNVIPHTYCDHISVAKISCGNVQINAIYGLMVVLLIGDFDIPCITVSYTMILWAAVSLSSADARQKAFSTCTAHICAIVITYVPAFFTFFTHRFGWHTIPSHIHIIMANLYLLMPPTMNPIVYGVKTKQIQKRVIRFFFKGRENSSHKF", "length": 321 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9X6-1", "protein_name": "Paired immunoglobin-like type 2 receptor beta 1 like 2", "gene_name": "Pilrb2l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAWILLLLLLAACLHTGNSAGYQKTQDYGVNQPEQLTGIQGGSIEIPFSFYFPWELAKDPQMSIAWRWKVFFGEVIYNSTLLFLHEHFKGRLIMNWTQGQTSGVLRILNLKANDQSTYFSRIFLQATEGMKLWQSRAGTKLIIHALSTTMASPSIIPSAVPTAGLENTRGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWVIFLWWKQRLPTARISHQVSLHHTPCIPQSSMSSLWESELVAAGFSCESHSWITPTSAMGARIPSPWNQGPPVCLWA", "length": 289 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RAD6-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f19f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSTNQSSVSEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILVISTDSHLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILSSQAISFSGCLTQLYFLCVSVNMDNFLLAVMAYDRFVAICHPLYYTTKMTHQLCVLMVSGSWVTASLNALLHTLLMARLSFCGDNIIHHFFCDVTPLLKLSCTATNLNELMILTEGAVIMVTPFVCILISYIYITNAVLRVSSFRGGWKAFSTCGSHLAVVCLFYGTIIAVYFNPVSSHSSEKDTAATVLYTVVTPMLNPFIYSLRNNDLKGALRKVVHRKI", "length": 309 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RBH5-1", "protein_name": "Surfactant associated 2", "gene_name": "Sfta2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPSMCLFLLLTLLCSSLAGPTKVTLQVKLTEASQAKTSQDSGFLDMLQKICLLLHLSPGTNVTLHHKGPPHHLTCRA", "length": 78 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCJ6-1", "protein_name": "EF-hand domain-containing protein", "gene_name": "AABR07013776.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADQLTEEQIAEFKEAFPLFDRDGDQTVTTKELGMVMGSLGQNPTEAELQDMISEVDADGNGTINFPEFLTMMARKMKGTDVEEEIREAFRVFDKDGYTSAAEFRHVMTTLGEKLTDEEVDGMIREADMDGDGQVIYEEFVQMVTAK", "length": 147 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCP1-1", "protein_name": "Leukocyte immunoglobulin like receptor B3", "gene_name": "Lilrb3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSTLTALAYLGLILGSENPVLSGAFTKPTIKMVPSNVVTTGKQVTIFCEGSSHAKEYRLHKEGSPDYLTPTTFLETENKAKFSISPIQWNNAGQYWCSYRSLTNKLRQSDIMELVVTGVILGEVTLSALPSYVVTSGRNVTLQCASQVVYDRFILMKEDEKFSTAMPSWKIYPVLWGAIFTLGPVTSNQRWRFTCYGYYLSSSLIWSKPSNHLELLVSGTLHKPILWAHPGSMVTSGSPVTIWCEGDQETQTYVLYRQGSLESWNRQTQKDYNNKAEFTIPSVTYLNAGHYFCYSYTSAGWSEHSDTLELVVTGVYKKPIFLALKNPIVNLGVTVTISCTSNQSFNCFLLMDDDQKIYRFFDLQYSYSGESLARFQVGPITSRQRWRFRCYGYYTDNPQVWSEASDPLDFLVSGNLQKPTLWAEPGSVIESGNSVTIWCEGTMETQIYFLYKEGSPSSWLRQTPKEPGNKAMFFIAFMEKHNAGQYRCYCYNFGGWSQHSDTLELVMTGVHHGKPTLSAFPSPMVTSGGNVTLYCASSTIYDWYIVTGQDLKFSRFQRAQFIPTEMSQALFSEISVASRKKGPFRCYGFNESTPHLWSEASNPLEIHVSGVSRKPSLLNQQGPVLAPGENLTLRCSSELSYDRFSLSKEGRSDLPQLSVSQSQTGEYYANFFLYSVDFSIAGQYRCYGASRFSSEWSAPSVPQDILVTGHPPITPSLSVNPGTIVSSGENVTLLCQSSIPMDTFFLFKKGDAYPYMHQRLKFQGPQCKAEFSLSAVTPNIGGIFTCFGSQSSSPYLLSHPSVPVEIKVSGLAKYQKSLIWVSVVFFLLFFVLTLFFFLRLWHQNKHRKGVQTKIDLQHPEGAVEPKSIVGHLQKSSRPAPAIQEEILCEKRWPGREITEVSASDATVKVTRSADNVELGILSQHQDDPSIHLYAQVKPARLRRAQTTSSSLFPKELQHSKHRQKNRDQVIDQQADTSQDSHAVIYAQLHIMTPRQGRQTSLFPGRIC", "length": 1008 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCQ2-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100361204", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQSSIP", "length": 328 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCW7-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb1l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAQLLLLLLSAACLHTGNSAGYPKKNVFSVDQPAVLSGVQGGSIEISFSFYFPWELAKVPQMSIAWRWKNYHGEYIYNSTQPFIHEHFKGRLIVNWSQGQTSGVLRILNLKENDKATYFSRVFLPTTEGMKSWQSVAGTQLIIIHAPSTTVVSPSIIPSVVPIAGLEDTRGKRTPSLLNLGAMVRMVVSKVVVIIALYGWVIFLWWKQRSAWSLLSFLTTWKSEEQMQMNTAPAPKEFK", "length": 252 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCY4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "AABR07000137.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSAPLGSLGRKSKNQSLGLDMLGTVLSTDSLSCTFTVKYRSSPGQCSVNGKPLLLFNDERQNSPVGKPEKKGNATKVCAELNQSLKDIFQKMMNLESWLFESKGNHTLQVTVQSQYNQGIFMDGCWVFTIDRQYPFYFYPKIMTWRESHPDASRTVSQWQNNRQVAQSLRTCSMGDFSQCLRKLLTDSREVPRSTITTLDPTQPSSAIQIPPTVDSASSVFTTWSQYIFVLILCLAILIINALIP", "length": 246 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RD07-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000064269", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRMMAMQMMTNSISDAMERYKELIQVNSSYNIRQSQLLREQAQLKNNIQILLNEKRELLVEETELPASSVEAKRLCEEAGMNICDPRAKQQQV", "length": 93 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RDP5-1", "protein_name": "Zinc finger protein 353", "gene_name": "Zfp353", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVAETPGASQTVPCNTQPSPVESSQLVSGQSSEMPTWKKTVMASACCNPQETACTQNSTAHPGKASDFYFGEPSETASFIQQVVSAEQKSSPAGSCLMNLSSTTKSCLSHPLKTEVLDTRKTLCNEGHWGRTLNSDKTLLIQITTMYESQWRTLGNHPVAPSGYHEGQAPNMDHLVDSVSNQTFIGDLEMEPSCNHVLYTDQFITSFSEQNPFGDQQRSPVADNRFYADQKILPNGYQTFYEPQMSTNYQITCVCGQNVCRCQEILLSGEHLLSEYQTSGYRYDQDLIVNLQVTSPIGGEPLHDSQIPNSNFDTTSCGTKRTTSSEEDNLAWHPETSLSSEETFLDQMRTSVDQNVYPSHNGTLKIEESLEPQVTSLSNQAPYVGESSDTSNSPLIQIQPQEISSASGLDQGQHPEIKLDLKTQSPVSLKNPHNSKRYCCTYQGCKKSYKKSQHLKDHMKKHTGVKPYMCNKPGCDWKFFRLVDLNRHKQKHSGERPYPCPMCNKNYSRFYYLKQHLRSHIQASPTTAT", "length": 530 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M9MSI7-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG42818", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MFIHQREQLPFKHNEQDPNYLAPVIQKRKPMDKDPRNPLKRLKFLQEFPTQSSKGDLDDLKYPTQLEGRHDSPKYDKTFHTEIHANNETDSQELENIILEKNLQDSKTEFQENRASQPKNMHSFQIPEAIESHFNNKELQNENDLHKGLKQQYRSGSEQDKSGPENVREIASKLILQWAENQRSLLDSFVKAITDVLKVHDSKLNMKINISPRDIMILKDMLKQLLESIMQLREGSTSTRARIVLNKWIETQKSLIDSFSQAIQNTNQNVDNIANVYEVMENLNKNLRELVILLSDKESFPTTESSSSQQTTSIYATTTFYLTSSTFGSTHPIVDENINRVNIMGNLIKGLRNIMVQMDETNKTSSSTSYTTTESTYIQPSTSTYLNAEVTTSHPTTSTYEVTNIITDESKIKDMFNLIKGIEDLISQYNGKHKFTSTTSLTGKSNSREPTMTTYSSAGGITSHSFTTTSPKTVTTSSSHSTTESSPSHPTTSNYEVTVFDQDSHKFKVMKNLIKELKGLIEHFSDTKNITSTTYSTGDSKSFQPTATTPDSTDRSSSQPITFPESTTSTTNLQSTITNHLSTESTSSQLNTTLSITGTTTPNLTTSTHDFKDQINDDDSKSLKHLIKILSDLVYSLNDKNNIKSTSQLTTESTFNSSINITNSTTVASSTFSTTESMAIHSTPYLSTREITVFQFNDVENINPIISNNSTTVTTNIHSSTYTTSTTDNTTSYPNLSTTESSPTFDSTISHSNTSSQTRSLGSYKDKIKNIVELLKKLRKIQKTLADKSKGQLSPMLISRIKAVLKQIVAGNIDSVNGDSTELEILLSTTVNPNEDTTDLTMEKLLKLFDDFERMYNVLLDDSIQSTTQSTTQNNTIFSTTYSTIFSTTQSISTTSPTQYALTSSTPNTSTTSHSSTPSSINNLRSDESNNHQPIVDAIQQLKMALYHDFYAFKKSQEERMEKILQLLNGKPIDRRTKTIAKPRTIRKKVSREIQKRNSDVKEDKIHHYKADKFIKNPKNGNQDSHIPKPILNSARSKIKDVPLKLSAIKVNGGLKHLPSKRKANEEVSAMHEIFPEPVSILPHK", "length": 1085 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "O08640-1", "protein_name": "Keratin-associated protein 14", "gene_name": "Krtap14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSCNSCSGTFSQSFGGQLQYPISSCGSSYPNNVFYSTDLQTPITHQLGSSLHSGCQETFCEPTNCQTAYVVSRPCQRPFYSQRIRGPCRPCQSTFSGSLGFGSRGFQSFGCGYPSQGFGSHGFQSVGCGTPTFSSLNCGSSFYRPTCFSTKSCQSVSYQPTCGTGFF", "length": 167 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O21032-1", "protein_name": "Large ribosomal subunit protein uL16m", "gene_name": "mrpl16", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIPNRQKFTKNHKRNLITKETRKTGLVLGNYGIKATETGYLKMKQMERIKGDLVKKLKDNMDIYFNFYPLFGLTNKGTARMGAGKGEVSEWYVLVKKGSIVVEFIKSRMTAGAMQKVIRYSANKWPIKVRMTQIKQGLYEKKI", "length": 144 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21042-1", "protein_name": "Cytochrome c oxidase subunit 1+2", "gene_name": "2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKILEIYDKQIAEKEGNIFIFISKWIISVDHKNIGTMYTNFSILAGIVGTLLSLVIRMELSTGNMLDGDGQQYNVIVTAHGLIMIFFVVMPAMLGGFANWFIPIMVGSPDVAFPRLNNISLWLIIVSFFLLLTSSCVGIGVGTGWTVYPPLSTMEYHPGHAVDVGILSLHIAGASSLLGAINFLTTVFNMKIAGLSWSKVSLFVWSILITAVLLVLSLPVLAGGLTMLITDRNFETTFFDPIGGGDPILYQHLFWFFGHPEVYILILPGFGLVSIILSKYSNKGIFGVKGMISAMSAIGFLGFLVWAHHMYTVGLDVDTRAYFTAATMIIAIPTGIKIFSWLATLWGGVIKITTPMLFVIGFLVLFTIGGLTGVVLANGGLDISLHDTYYVVAHFHYVLSMGAIFAIFAGYYYYYSIMNSTRLFGVVRYNEQLGRIHFWTMFIGVNVTFFPMHFLGLAGMPRRIGDYPDAYIGWNLIASYGSLITAFGLLFFVVNIFTPYIRRSVNIKNGAIILMGLDFARDWQIGFQDPATPIMEGIIDLHNYIFFYLIVVAVFIGWVMGRILWRFSYKWSYPTIGDIEIFKNFTAYNQIIHGTVIEIVWTLIPTVILYLIAIPSFTLLYAMDEIINPTVTIKIIGHQWYWSYEYGDNASNLIEFDSYMVYERDLAEGQLRLLEVDNAMVVPVKTHIRLIITSGDVLHSWAIPSFGIKVDAVPGRLNQIGLYVKREGTFYGQCSELCGVDHGFMPIKVQAVKLGEYFSKLNEK", "length": 764 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21049-1", "protein_name": "Cytochrome c oxidase subunit 3", "gene_name": "cox3", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKGFFENLFRQNVRSVINTGKKVGARAAAREIINQEWGYPLANHEVLFLTNVYQPKHMKRHPFHIVRGTVAPLAVTLPLGFFVLNYFGVISSKLGLLIALSSFIGGLVIWTISIIFDSLYDQQHTYEVKRGLVMGMMMFIISEVMFFFSFFWSYFYISLSPNIAIGCVWPPYGLTVYSYMGLPLLNTVLLLLSGAILTDGYTILTEQKAVHEKNEKVLAVEEAFKNLMNLYKTKNSINTLTFVDERRDKFFGKESRQEDKIAEQKLIAISAGVKELRDLDWDLYFFENPENIEPNYKEPTNLSVIEYALITIYLKKRNKVIKTRLYFTLLCAVVFLACQGYEYFFAPFSMNDGIYGSLFFLLTGFHGFHVLVGSILIGIITIRFIVGNFNLLNVGTNFQIYKNKSTGFACTLFYWHFVDIVWIFLYIVIYWWGSR", "length": 435 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O23373-1", "protein_name": "Formin-like protein 3", "gene_name": "FH3", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGRLRLAFLAISLVVFVCVSEEIFSRGGLNLLRFSVYGEDVAEQTWIHQNPRRKLISYPKKFSVSAPNLAFGPAPSFAPGPGPSFAPGPAPNPRSYDWLAPASSPNEPPAETPDESSPSPSEETPSVVAPSQSVPGPPRPPPQREKKDDILMKLIIAVASTAVLTFVFVALMFLCCFKRNCNNAVGSRDGPRDEGPLLRLSTGSTENSPTVASTSRKMFSVASSKKRSFLSRVSLKRNGHEFSTAESSSAAGLPPLKLPPGRSAPPPPPAAAPPPQPPPPPPPKPQPPPPPKIARPPPAPPKGAAPKRQGNTSSGDASDVDSETGAPKTKLKPFFWDKMANPDQKMVWHEISAGSFQFNEEAMESLFGYNDGNKNKNGQKSTDSSLRESPLQYIQIIDTRKAQNLSILLRALNVTTEEVVDAIKEGNELPVELLQTLLKMAPTSEEELKLRLYSGDLHLLGPAERFLKILVDIPFAFKRIESLLFMISLQEEVSGLKEALGTLEVACKKLRNSRLFLKLLEAVLKTGNRMNVGTFRGDAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGVRALRLQSRSFSSVKTDDSNADSSPQSVERYRSTGLQVVTGLTTELEDVKRAAIIDADGLAATLANISGSLTNAREFLKTMDEESDFERALAGFIERADADFKWLKEEEERIMVLVKSSADYFHGKSAKNEGLRLFAIVRDFLIMLEKVCREVKETTKTTNHSGKKESEMTTSDSNQPSPDFRQRLFPAIAERRMDSSDDSDDEEDSSPS", "length": 785 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O35698-1", "protein_name": "RNA-binding motif protein, Y chromosome", "gene_name": "Rbmy", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKRSATSAQTRSNTGLRGREPHRREISRNMPRGEPASSRRDEYPLPRDYGQSSNDRKYESTSRGYCDYGNYHSREESASKVFSDHAGYLGGRDRDFSEYLSGNSYRDTYRSYGRFHEAPSARGGNNRYDDYSNSQDGYGGRGEPYISNRSNIYSSDYERSGRQEVLPPPIDREYFDREGRQERGHSPKDGLYSASRESYSSNTKIWGIPWRSWRKQI", "length": 380 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O60309-1", "protein_name": "Leucine-rich repeat-containing protein 37A3", "gene_name": "LRRC37A3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTSAQCPALACVMSPLRFWGPWPLLMWQLLWLLVKEAQPLEWVKDPLQLTSNPLGPPEPWSSHSSHFPRESPHAPTLPADPWDFDHLGPSASSEMPAPPQESTENLVPFLDTWDSAGELPLEPEQFLASQQDLKDKLSPQERLPVSPKKLKKDPAQRWSLAEIIGIIHQLSTPQSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQLPQLLEEEPSSMQQEAPALPPESSMESLTLPNHEVSVQPPGEDQAYYHLPNITVKPADVEVTITSEPTNETESSQAQQETPIQFPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESSREVESSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASPSVSVKPPDVQLTIAAEPSAEVGTSLVHQEATTRLSGSGNDVEPPAIQHGGPPLLPESSEEAGPLAVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSLTHQEAPAQTPEFPNVVVAQPPEHSHLTQATVQPLDLGFTITPESMTEVELSPTMKETPTQPPKKVVPQLRVYQGVTNPTPGQDQAQHPVSPSVTVQLLDLGLTITPEPTTEVGHSTPPKRTIVSPKHPEVTLPHPDQVQTQHSHLTRATVQPLDLGFTITPKSMTEVEPSTALMTTAPPPGHPEVTLPPSDKGQAQHSHLTQATVQPLDLELTITTKPTTEVKPSPTTEETSTQLPDLGLAIIPEPTTETGHSTALEKTTAPRPDRVQTLHRSLTEVTGPPTELEPAQDSLVQSESYTQNKALTAPEEHKASTSTNICELCTCGDEMLSCIDLNPEQRLRQVPVPEPNTHNGTFTILNFQGNYISYIDGNVWKAYSWTEKLILRENNLTELHKDSFEGLLSLQYLDLSCNKIQSIERHTFEPLPFLKFINLSCNVITELSFGTFQAWHGMQFLHKLILNHNPLTTVEDPYLFKLPALKYLDMGTTLVPLTTLKNILMMTVELEKLIVPSHMACCLCQFKNSIEAVCKTVKLHCNSACLTNTTHCPEEASVGNPEGAFMKVLQARKNYTSTELIIEPEEPSDSSGINLSGFGSEQLDTNDESDVTSTLSYILPYFSAVNLDVKSLLLPFIKLPTTGNSLAKIQTVGKNRQRLNRVLMGPRSIQKRHFKEVGRQSIRREQGAQASVENTAEEKRLGSPAPRELKQPHTQQGPEKLAGNAVYTKPSFTQEHKAAVSVLKPFSKGAPSTSSPAKALPQVRDRWKDLTHAISILESAKARVTNMKTSKPIVHSRKKYRFHKTRSRMTHRTPKVKKSPKVRKKSYLSRLMLSNRLPFSAAKSLINSPSQGAFSSLRDLSPQENPFLEVSAPSEHFIENNNTKDTTARNAFEENVFMENTNMPEGTISENTNYNHPPEADSAGTAFNLGPTVKQTETKWEYNNVGTDLSPEPKSFNYPLLSSPGDQFEIQLTQQLQSVIPNNNVRRLIAHVIRTLKMDCSGAHVQVTCAKLVSRTGHLMKLLSGQQEVKASKIEWDTDQWKTENYINESTEAQSEQKEKSLEFTKELPGYGYTKKLILALIVTGILTILIILLCLIEICCHRRSLQEDEEGFSRDSEAPTEEESEALP", "length": 1634 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "O80489-1", "protein_name": "small monomeric GTPase", "gene_name": "SARA1A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MFLFDWFYGILASLGLCKKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKINFKAFDLGGHQIARRVWKDCYAKVDAVVYLVDAYDRDRFVESKRELDALLSDEALANVPCLILGNKIDIPYASSEDELRYYLGLTNFTTGKGIVNLEDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYIK", "length": 193 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80614-1", "protein_name": "RING-type E3 ubiquitin transferase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSDMRDERFFYHRYLSVTNRTTPTTATNLPTSTSNMRSTSLMTPRVAHTSMSSGGDFPDDRFFHARHQSATDRAASNRSRAIMPISTTNVPSSTSNSPRVLQTSMSRRGTSPMSSSTRRSVQASMSARETVPSSTSTRSMQTSTSTPEIMPTSSRNVITSSEEVANTFTQTSYIQFGSLWETNTTPSTRSWPTVPSSNSPRVLQTSMSRRGTSPMSSSTRRNVQSSMSGRETVSSSTSTSSMQTSMSTPEIMPTSSRNVITRSEEVANTFSTQTPYIQFGRLWETNTTSSTRSRTTVPTSTTNVPSSNSSRVLQTSMSTRGTFPMSSSTRMSVQASMLAPGTVSSSMSTVEIMPTSARNMITMSEEVANSFTQTSYIQFGSLWETFKTVTKLSRVAMVENGECVICLEEWRKETYVTSSTSNMRTSSLMTLTRFIDEQISLRATVSSTRTTARLLTNESPATIRAVAMLPRVAMVEKGECVICFEEWSKSDMETELPCKHKYHLECVEKWLKIHTSCPQCRYKLSCVYKSFLML", "length": 535 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81153-1", "protein_name": "Proteasome subunit beta type-3-B", "gene_name": "PBC2", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFICTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYVVTPKEVKERILKGRMD", "length": 204 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P00757-1", "protein_name": "Kallikrein 1-related peptidase-like b4", "gene_name": "Klk1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYNDKYQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLICDGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMANNP", "length": 256 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P01241-1", "protein_name": "Somatotropin", "gene_name": "GH1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFEEAYIPKEQKYSFLQNPQTSLCFSESIPTPSNREETQQKSNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P02762-1", "protein_name": "Major urinary protein 6", "gene_name": "Mup6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04071-1", "protein_name": "Kallikrein 1-related peptidase b16", "gene_name": "Klk1b16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSRIVGGFKCEKNSQPWQVAVYYHKEHICGGVLLDRNWVLTAAHCYVDECEVWLGKNQLFQEEPSAQNRLVSKSFPHPGFNMTLLTFEKLPPGADFSNDLMLLRLSKPADITDVVKPIDLPTKEPKLDSTCLVSGWGSITPTKWQKPDDLQCMFTKLLPNENCAKAYLLKVTDVMLCTIEMGEDKGPCVGDSGGPLICDGVLQGTVSIGPDPCGIPGVSAIYTNLVKFNSWIKDTMMKNA", "length": 261 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04644-1", "protein_name": "Small ribosomal subunit protein eS17", "gene_name": "Rps17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKNLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTVGMNFKTPRGAV", "length": 135 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P05817-1", "protein_name": "Prestalk D11 protein", "gene_name": "ampA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKLILLLILSSCLVLSVKSEVNVDCSLVRCAQPICKPHYRLNMTDSCCGRCEPCTDVACTLQVKYCQDGEVPTGCCPCTLPPTKPDCSLVKCARPVCKPYYRLNMTDSCCGRCEPCTGVACTLQIKYCKDGEVPTGCCPCTPQPTKKPDCSKVPCPKILKYCQEGELPTGCCPCTPQPTKKPDCSRVPCPKILKYCKEGELPTGCCPCTPQPTKKPDCSDVMCTMDIRYCKNGELPTGCCPCTPQETKVPDCSKAMCTMDIKYCKPGEKPFGCCPCRENLTQ", "length": 284 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P06325-1", "protein_name": "T-cell receptor gamma chain V region 5/10-13", "gene_name": "Tcrg-V1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLLRWPTFCCLWVFGLGQLEQTELSVTRATDESAQISCIVSLPYFSNTAIHWYRQKAKKFEYLIYVSTNYNQRPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVCRSGTSWVKIFAKGTKLVVIPP", "length": 135 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P06349-1", "protein_name": "Histone H1t", "gene_name": "H1-6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSETAPAASSTLVPAPVEKPATKRRGKKPGMATARKPRGFSVSKLIPEALSMSQERAGMSLAALKKALAAAGYDVEKNNSRIKLALKRLVNKGVLVQTKGTGASGSFKLSKKAASGNDKGKGKKSASAKAKKLGLSRASRSPKSSKTKVVKKPKATPTKGSGSRRKTKGAKGLQQRKSPAKARATNSNSGKSKMVMQKTDLRKAAGRK", "length": 208 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P07628-1", "protein_name": "Kallikrein 1-related peptidase b8", "gene_name": "Klk1b8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRFLILFLALSLGGIDAAPPLQSRVVGGFNCEKNSQPWQVAVYDNKEHICGGVLLERNWVLTAAHCYVDQYEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLTLKEIPPGADFSNDLMLLRLSKPADITDAVKPITLPTKESKLGSTCLASGWGSITPTKWQKPDDLQCVFLKLLPIKNCIENHNVKVTDVMLCAGEMSGGKNICKGDSGGPLICDSVLQGITSTGPIPCGKPGVPAMYTNLIKFNSWIKDTMTKNS", "length": 261 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P07647-1", "protein_name": "Submandibular glandular kallikrein-9", "gene_name": "Klk9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWFLILFLALSLGQIDAAPPGQSRVVGGYNCETNSQPWQVAVIGTTFCGGVLIDPSWVITAAHCYSKNYRVLLGRNNLVKDEPFAQRRLVSQSFQHPDYIPVFMRNHTRQRAYDHNNDLMLLHLSKPADITGGVKVIDLPTEEPKVGSICLASGWGMTNPSEMKLSHDLQCVNIHLLSNEKCIETYKNIETDVTLCAGEMDGGKDTCTGDSGGPLICDGVLQGLTSGGATPCAKPKTPAIYAKLIKFTSWIKKVMKENP", "length": 259 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P08932-1", "protein_name": "T-kininogen 2", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKLITILLLCSRLLPSLAQEEGAQEMDCNDETVFQAVDTALKKYNAELESGNQFLLYRVTEGTKKDGAETLYSFKYQIKEGNCSVQSGLTWQDCDFKDAEEAATGECTTTLGKKENKFSVATQICNITPGKGPKKTEEDLCVGCFQPIPMDSSDLKPVLKHAVEHFNNNTKHTHLFALTEVKSAHSQVVAGMNYKIIYSIVQTNCSKEDFPFLREDCVPLPYGDHGECRGHTYVDIHNTIAGFSQSCDLYPGDDLFSLLPKKCFGCPKNIPVDSPELKEALGHSIAQLNAQHNHLFYFKIDTVKKATSQVVAGTKYVIEFIARETNCSKQTNTELTADCETKHLGQSLNCNANVYMRPWENKVVPTVRCQALDMMISRPPGFSPFRLVQVQETKEGTTRLLNSCEYKGRLSKAGAGPAPDHQAEASTVTP", "length": 430 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C0S7-1", "protein_name": "Histone H2A.Z", "gene_name": "H2az1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKTV", "length": 128 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C2B7-1", "protein_name": "Large ribosomal subunit protein mL52", "gene_name": "MRPL52", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAALGMLLSTGVRRLHCGSAARAGSQWRLRQGLAANPSGYGPLTELPDWSYADGRPAPPMKGQLRRKAQREKFARRVVLLSQEMDAGLQAWQLRQQEKLQEEKRKQQNALKPKGVLLQNPGPSQ", "length": 124 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P0C644-1", "protein_name": "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1", "gene_name": "Ppip5k1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWSLTANEDEDESATAHFFLGAGDEGLGTCGIGMRTGESDSELLEDEEDEVPPEPQIIVGICAMTKKSKSKPMTQILERLCRFDYLTVVILGEDVILNEPVENWPPCHCLISFHSKGFPLDKAVAYSKLRNPFLINDLTMQYYIQDRREVYRILQEEGIDLPRYAVLNRDPACPEECNLIEGEDQVEVNGAVFPKPFVEKPVSAEDHNVYIYYPSSAGGGSQRLFRKIGSRSSVYSPESSVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVMLTAMEKLVARKVCVAFKQTVCGFDLLRANGHSFVCDVNGFSFVKNSMKYYDDCAKILGNTIMRELAPQFQIPWSIPTEAEDIPIVPTTSGTMMELRCVIAIIRHGDRTPKQKMKMEVTHPRFFALFEKHGGYKTGKLKLKRPEQLQEVLDITRLLLAELEKEPGAEIEEKTGKLEQLKSVLEMYGHFSGINRKVQLTYYPHGVKASSEGQDLQREPPAPSLLLVLKWGGELTPDGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQHRVKARLHHILQQDAPFGPEDYDQLAPTGSTSLLNSMSVIQNPVKVCDQVFALIENLTHQIRERMQDPSSVDLQLYHSETLELMLQRWSKLERDFRQKSGRYDISKIPDIYDCVKYDVQHNGSLGLQGTAELLRLSKALADVVIPQEYGISREEKVEIAVGFCLPLLRKILLDLQRTHEDESVNKLHPLYSRGVLSPGRHVRTRLYFTSESHVHSLLSVFRYGGLLDETKDAQWQRALAYLSAISELNYMTQIVIMLYEDNTRDPLSEERFHVELHFSPGVKGVEEGSAPAGCGFRPASSENEEMKTDPGSIENLCPAKPSDEPDRALQTSPQPVEGTGLPRRSPLIRNRKAGSMEVLSETSSSRPGGYRLFSSSRPPTEMKQSGLGSQCTGLFSTTVLGGSSSAPNLQDYARTHGKKLPPAGLKHRDELLFVPAVKRFSVSFAKHPTNGFEGCSMVPTIYPLETLHNALSLRQVSEFLTKVCQRHTDAHAQASAALFDSMHNHQASDNPFSPPRTLHSPPLQLRHRSEKPPWYSSGPSSTVSSAGPSSPTTVDGNSHFGFSDQSSVNTQMIEEKQGLGLLQETPGDGTPEFHIELAESTQSPQEPPVEISPPGSQDDTEVNQTCQEVPDTIQPCHDILEEIGQPNQEVPDISQLLLKNHDTATNTCQPCQASQLSKKVYEEICQLCQDNPEESNQLCQEVSVELGRMVHRFPVSIGSTTQETLMEIGRPTQEIPEEPCQEFSEKVGMLTQKASAISELSQDILETDNPSQELSEETDLQAQEVSEEIDQEPEVVDELSNEDIS", "length": 1434 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C7H9-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 7", "gene_name": "USP17L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLGGDWQFNHFSKLTSSRLDAAFAEIQRTSLSEKSPLSSETRFDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQKIGNTFYVNVSLQCLTYTLPLSNYMLSREDSQTCHLHKCCMFCTMQAHITWALHSPGHVIQPSQVLAAGFHRGEQEDAHEFLMFTVDAMKKACLPGHKQLDHHSKDTTLIHQIFGAYWRSQIKYLHCHGVSDTFDPYLDIALDIQAAQSVKQALEQLVKPKELNGENAYHCGLCLQKAPASKTLTLPTSAKVLILVLKRFSDVTGNKLAKNVQYPKCRDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATQESTLDHWKFPQEQNKTKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSTKPTDQESMNTGTLASLQGSTRRSKGNNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0CW02-1", "protein_name": "Lymphocyte antigen 6C1", "gene_name": "Ly6c1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTSHTTKSCVLILLVALLCAERAQGLQCYECYGVPIETSCPAVTCRASDGFCIAQNIELIEDSQRRKLKTRQCLSFCPAGVPIRDPNIRERTSCCSEDLCNAAVPTAGSTWTMAGVLLFSLSSVVLQTLL", "length": 131 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DKL4-1", "protein_name": "Spliceosome-associated protein 130 A", "gene_name": "SAP130A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DKL6-1", "protein_name": "Spliceosome-associated protein 130 B", "gene_name": "SAP130B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DML3-1", "protein_name": "Chorionic somatomammotropin hormone 2", "gene_name": "CSH2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEETYIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLRSMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DMV2-1", "protein_name": "Cancer/testis antigen family 45 member A9", "gene_name": "CT45A9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETAFSPKSQQEINADIKRQLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DOV1-1", "protein_name": "Interferon-activable protein 211", "gene_name": "Ifi211", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLRGLECINKHYFSLFKSLLARDLNLERDNQEQYTTIQIANMMEEKFPADSGLGKLIEFCEEVPALRKRAEILKKERSEVTGETSLEKNGQEAGPATPTSTTSHMLASERGETSATQEETSTAQAGTSTAQAGTSTAQAGTSTAQKRKSMREEETGVKKSKAAKEPDQPPCCEEPTAMCQSPILHSSSSASSNILSAKNQKSQPQNQNIPRGAVLHSEPLTVMVLTATDPFEYESPEHEVKNMFHATVATVSQYFHVKVFNIDLKEKFTKNNFITISNYFESKGILEINETSSVLEAAPKQMIEVPNCITRNANASPKICDIQKGTSGTVFYGVFTLHKKKVKTQNTSYEIKDGSGSIEVVGSGQWHNINCKEGDKLHLFCFHLKRERGQPKLVCGDHSFVKVTKAGKKKEASTVQ", "length": 425 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DTA3-1", "protein_name": "Speedy protein E11", "gene_name": "SPDYE11", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVSGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD3-1", "protein_name": "Speedy protein E14", "gene_name": "SPDYE14", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD4-1", "protein_name": "Speedy protein E15", "gene_name": "SPDYE15", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW11-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 6", "gene_name": "TAF11L6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW12-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 7", "gene_name": "TAF11L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW13-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 8", "gene_name": "TAF11L8", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW14-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 10", "gene_name": "TAF11L10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P11588-1", "protein_name": "Major urinary protein 1", "gene_name": "Mup1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEKHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P11589-1", "protein_name": "Major urinary protein 2", "gene_name": "Mup2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLEKSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAKLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P13255-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "Gnmt", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVDSVYRTRSLGVAAEGIPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILSTGCAPPGKNIYYKSDLTKDITTSVLTVNNKAHMVTLDYTVQVPGAGRDGAPGFSKFRLSYYPHCLASFTELVQEAFGGRCQHSVLGDFKPYRPGQAYVPCYFIHVLKKTG", "length": 293 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P13675-1", "protein_name": "Y-linked testis-specific protein 1", "gene_name": "Ssty1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVSCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYFVKYDGIDSIYVLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFERKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P15515-1", "protein_name": "Histatin-1", "gene_name": "HTN1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKFFVFALVLALMISMISADSHEKRHHGYRRKFHEKHHSHREFPFYGDYGSNYLYDN", "length": 57 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P16374-1", "protein_name": "Zinc finger protein 60", "gene_name": "Zfp60", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANSSSQHMVCGSVTFRDVAVDFSQEEWACLDATQKVLYRNIMLETYSNLVAVVGRCIPKPDLIVLLEPEKEPWMAVKKETGRPSQGLETGFEAENRSPKNHVYNKKLPKQTIQQLSKTSDVQGVSVSNGPGYSVIKEPQNYQEGDANRNITNKKEMSTYTSKTLAHNKEKPYKCKDCGKCFGCKSNLHQHESIHTGEKPYECKDCGKTFRLPQMLSRHQKSHSDERPFECNICGKSFHLPTLLQYHKNIHTGLKPFECEECGKSFKSFNRISTLFQHRTIHAGMKPYKCNVCGKAFNRRSNLLQHQKIHSEDRPFHCKVCGKAFTVLAQLTRHENIHTEDKSFECKQCGKIFSNGSYLLRHYDTHTNEKPFECNICGKAFRLHLYLSEHQKTHTDEKPFKCKLCESAFRRKYQLSEHQRIHTDGKPYQCKDCWEFFRRRSNFIEHQSIHTGKKPFECKDCGKVFRLNIHLIRHQRFHSDEKPFECKECGKAFHFSSQLNNHKTSHTGQTPFECKECGKSFKRVSSLVEHRIIHSGVKPYKCNACGRAFNRRSNLMQHEKIHSDERPFECKDCGKAFTVLAQLTRHQTIHNGKKSYECEQCGSAFRLPYQLTQHQRIHYDVKPFQCKECGRAFVRSTGLRIHERIHTGEKPFQCKECGEAFQYHYQFLGHFRIHTGKNPYECSECGKYFTYGRDLKVHQSIHNLEKP", "length": 707 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P20816-1", "protein_name": "Cytochrome P450 4A2", "gene_name": "Cyp4a2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGFSVFSPTRSLDGVSGFFQGAFLLSLFLVLFKAVQFYLRRQWLLKALEKFPSTPSHWLWGHNLKDREFQQVLTWVEKFPGACLQWLSGSTARVLLYDPDYVKVVLGRSDPKPYQSLAPWIGYGLLLLNGKKWFQHRRMLTPAFHYDILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIFHYVSLMTLDTVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNLIFFRVRSAFYGNSIIYNMSSDGRLSRRACQIAHEHTDGVIKTRKAQLQNEEELQKARKKRHLDFLDILLFAKMEDGKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGDGTSVTWDHLDQMPYTTMCIKEALRLYSPVPSVSRELSSPVTFPDGRSIPKGIRVTILIYGLHHNPSYWPNPKVFDPSRFSPDSPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPVPMPRLVLKSKNGIHLRLKKLR", "length": 504 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P21571-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "Atp5pf", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQRIFRLSSVLRSAVSVHLRRNIGVTAVAFNKELDPVQKLFLDKIREYKAKRLASGGPVDTGPEYQQEVDRELFKLKQMYGKGEMDKFPTFNFEDPKFEVLDKPQS", "length": 108 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P22237-1", "protein_name": "NADH-ubiquinone oxidoreductase subunit 9", "gene_name": "nad9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKDYKNELKVKINLGEHLRLSIPGLVKKIMYKTHYLEIQVEKEKMLTVLKYLKEASKYQCNMLLDIVCVDCLNIEEIKIGRFKLIYVLNSIYNNTRVHLSTYVENNGIIETTSGLFESSVWLEREIWDMFGIYFEKHPDLRRILTDYGFVGYPLKKDFPITGYLEVYYDVNDKKIIYKPIELMQEYRNYNFGAVWGDYERKVYLENIIK", "length": 209 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P22283-1", "protein_name": "Cystatin-related protein 2", "gene_name": "Crp2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYKTLCGTQLLLAIFVLFLNFSHATAKGTRGPMEIFKKNFMEKNKLNDVYDIFKFLYNKFSHDTYLSNIKNQSFTMNTWGFGEIEVVKTKCRKIDSDFYKCSFQWEFCNIKRTPGVTIYYITLPGSVRCRKLLSKLVNCPFEEQTEQLKREICYFQLYPDYIEQNIRSVRFNCYTK", "length": 176 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P23266-1", "protein_name": "Olfactory receptor 1f45", "gene_name": "Or1f45", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILAIGTDSRLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILGSQAISFSGCLTQLYFLAVFGNMDNFLLAVMSYDRFVAICHPLHYTTKMTRQLCVLLVVGSWVVANMNCLLHILLMARLSFCADNMIPHFFCDGTPLLKLSCSDTHLNELMILTEGAVVMVTPFVCILISYIHITCAVLRVSSPRGGWKSFSTCGSHLAVVCLFYGTVIAVYFNPSSSHLAGRDMAAAVMYAVVTPMLNPFIYSLRNSDMKAALRKVLAMRFPSKQ", "length": 313 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24049-1", "protein_name": "Large ribosomal subunit protein uL22", "gene_name": "Rpl17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKKISQKKLKKQKLMARE", "length": 184 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24868-1", "protein_name": "G2/mitotic-specific cyclin-1", "gene_name": "CLB1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSRSLLVENSRTINSNEEKGVNESQYILQKRNVPRTILGNVTNNANILQEISMNRKIGMKNFSKLNNFFPLKDDVSRADDFTSSFNDSRQGVKQEVLNNKENIPEYGYSEQEKQQCSNDDSFHTNSTALSCNRLIYSENKSISTQMEWQKKIMREDSKKKRPISTLVEQDDQKKFKLHELTTEEEVLEEYEWDDLDEEDCDDPLMVSEEVNDIFDYLHHLEIITLPNKANLYKHKNIKQNRDILVNWIIKIHNKFGLLPETLYLAINIMDRFLCEEVVQLNRLQLVGTSCLFIASKYEEIYSPSIKHFAYETDGACSVEDIKEGERFILEKLDFQISFANPMNFLRRISKADDYDIQSRTLAKFLMEISIVDFKFIGILPSLCASAAMFLSRKMLGKGTWDGNLIHYSGGYTKAKLYPVCQLLMDYLVGSTIHDEFLKKYQSRRFLKASIISIEWALKVRKNGYDIMTLHE", "length": 471 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P25389-1", "protein_name": "Probable serine/threonine-protein kinase KCC4", "gene_name": "KCC4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTVANTETHSAAKPSSTIGPWKLGETLGFGSTGKVQLAQHERTGHRTAVKVISKSIFNNNGNHSNDDSVLPYNIEREIVIMKLLSHPNVLSLYDVWETNNNLYLILEYAEKGELFNLLVDHGPLPEREAINCFRQIIIGISYCHALGIVHRDLKPENLLLDSFYNIKIADFGMAALQTDADLLETSCGSPHYAAPEIVSGLPYEGFASDVWSCGVILFALLTGRLPFDEENGNVRDLLLKVQKGQFEMPNDTEISRDAQDLIGKILVVDPRQRIKIRDILSHPLLKKYQTIKDSKSIKDLPRENTYLYPLADSNNHTSASIDDSILQNLVVLWHGRHADDIVSKLKENGTNKEKILYALLYRFKLDSVRGSNKKNRNKIKKTKKNKRSSTLSSSSSLLLNNRSIQSTPRRRTSKRHSREFSSSRKRSSFLLSSNPTDSSPIPLRSSKRITHINVASANTQATPSGVPNPHKRNSKKRSSKRLSYMPNTKRSSLTSKSLSNFTNLIDDDDWEYIEKDAKRTSSNFATLIDEIFEPEKFELAKREKAELQRKVQEAKRQSVNAQKINEDEFGSEVSDGMKELKKINDKVSSPLINYEFSQQELLQDIDTLLTNRYQLSSYTRPISRLDPGLTPVTETLPNNLKEKTALLQDTEKKIIETIRRSKFLGSLLNVRGGLSPGKSELAPIEESPIVSTTPLIYNDRMEPRRISDVEVPHFTRKSKHFTTANNRRSVLSLYAKDSIKDLNEFLIKEDPDLPPQGSTDNESRSEDPEIAESITDSRNIQYDEDDSKDGDNVNNDNILSDFPQGVGISQEYDMKDKNPNQSPISKSAEPTLVVKLPSLSSFQGKNASGLGLYQREPSKVTLPSLTSNNSSVGENIEDGAEKGTESEKIAASLSDDDLKEDNDKKDNDTVNAPTTVKKPPNSVLLKKFSKGKILELEIHAKIPEKRLYEGLHKLLEGWKQYGLKNLVFNITNMIITGKLVNDSILFLRSTLFEIMVLPNGDGRSLIKFNKKTGSTKTLTKLATEIQIILQKEGVLDK", "length": 1037 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P28312-1", "protein_name": "Alpha-defensin 5", "gene_name": "Defa5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHEELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P28742-1", "protein_name": "Kinesin-like protein KIP1", "gene_name": "KIP1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MARSSLPNRRTAQFEANKRRTIAHAPSPSLSNGMHTLTPPTCNNGAATSDSNIHVYVRCRSRNKREIEEKSSVVISTLGPQGKEIILSNGSHQSYSSSKKTYQFDQVFGAESDQETVFNATAKNYIKEMLHGYNCTIFAYGQTGTGKTYTMSGDINILGDVQSTDNLLLGEHAGIIPRVLVDLFKELSSLNKEYSVKISFLELYNENLKDLLSDSEDDDPAVNDPKRQIRIFDNNNNNSSIMVKGMQEIFINSAHEGLNLLMQGSLKRKVAATKCNDLSSRSHTVFTITTNIVEQDSKDHGQNKNFVKIGKLNLVDLAGSENINRSGAENKRAQEAGLINKSLLTLGRVINALVDHSNHIPYRESKLTRLLQDSLGGMTKTCIIATISPAKISMEETASTLEYATRAKSIKNTPQVNQSLSKDTCLKDYIQEIEKLRNDLKNSRNKQGIFITQDQLDLYESNSILIDEQNLKIHNLREQIKKFKENYLNQLDINNLLQSEKEKLIAIIQNFNVDFSNFYSEIQKIHHTNLELMNEVIQQRDFSLENSQKQYNTNQNMQLKISQQVLQTLNTLQGSLNNYNSKCSEVIKGVTEELTRNVNTHKAKHDSTLKSLLNITTNLLMNQMNELVRSISTSLEIFQSDSTSHYRKDLNEIYQSHQQFLKNLQNDIKSCLDSIGSSILTSINEISQNCTTNLNSMNVLIENQQSGSSKLIKEQDLEIKKLKNDLINERRISNQFNQQLAEMKRYFQDHVSRTRSEFHDELNKCIDNLKDKQSKLDQDIWQKTASIFNETDIVVNKIHSDSIASLAHNAENTLKTVSQNNESFTNDLISLSRGMNMDISSKLRSLPINEFLNKISQTICETCGDDNTIASNPVLTSIKKFQNIICSDIALTNEKIMSLIDEIQSQIETISNENNINLIAINENFNSLCNFILTDYDENIMQISKTQDEVLSEHCEKLQSLKILGMDIFTAHSIEKPLHEHTRPEASVIKALPLLDYPKQFQIYRDAENKSKDDTSNSRTCIPNLSTNENFPLSQFSPKTPVPVPDQPLPKVLIPKSINSAKSNRSKTLPNTEGTGRESQNNLKRRFTTEPILKGEETENNDILQNKKLHQ", "length": 1111 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P29314-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPVARSWVCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED", "length": 194 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P33579-1", "protein_name": "Prolactin-8A5", "gene_name": "Prl8a5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELALSQPSFFGTLLMLVVSNLLLWEKAASIPACMVEDGGCWDPLREAFNSATQRAETLRNLSDQLYVEFFQNQFSSRQFADLSSQLIRKDETVLKAGTYCHSNRAKPKSRGVNIDIEEYLKMSINFCGFMDQPLFHLVIELSAMEGVPETILSKAKDLEENNRQLLDDLRWILTKVFPTAEIKEEFPSWDYLSFLKSSNKNHKFLAIFNLSSCLDYDTQVHYTLSQILNCLITGKDC", "length": 238 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P36006-1", "protein_name": "Myosin-3", "gene_name": "MYO3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MAVIKKGARRKDVKEPKKRSAKIKKATFDANKKKEVGISDLTLLSKISDESINENLKKRFKNGIIYTYIGHVLISVNPFRDLGIYTNAVLESYKGKNRLEVPPHVFAIAESMYYNLKSYNENQCVIISGESGAGKTEAAKRIMQYIAAASNSHSESIGKIKDMVLATNPLLESFGCAKTLRNNNSSRHGKYLEIKFNSQFEPCAGNITNYLLEKQRVVGQIKNERNFHIFYQFTKGASDTYKQMFGVQMPEQYIYTAAAGCTTADTIDDVKDYEGTLEAMRTIGLVQEEQDQIFRMLAAILWIGNISFIENEEGNAQVGDTSVTDFVAYLLQVDASLLVKCLVERIMQTSHGMKRGSVYHVPLNPVQATAVRDALAKAIYNNLFDWIVDRVNVSLQAFPGADKSIGILDIYGFEIFEHNSFEQICINYVNEKLQQIFIQLTLKAEQETYEREKIKWTPIKYFDNKVVCDLIEAKNPPGILAAMNDSIATAHADSNAADQAFAQRLNLFNSNPYFELRANKFVIKHYAGDVTYDINGITDKNKDQLQKDLIELIGTTTNTFLSTIFPDDVDKDSKRRPPTAGDKIIKSANELVETLSKAEPSYIRTIKPNQTKSPNDYDDHQVLHQVKYLGLQENVRIRRAGFAYRQTFEKFVERFYLLSPDCSYAGDYTWDGDTLEAVKLILRDAMIPEKEFQLGVTSVFIKTPESLFALEDMRDKYWYNMAARIQRAWRRFLQRRIDAAIKIQRTIREKKGGNKYVKLRDYGTKLLAGKKERRSMSLLGYRAFMGDYLSCNESKTKGSYIRRQVGIKDKVVFSIKGECLHSKFGRSAQRLKKVFILTKKTFYIIGQTREQNAMKYTQDYKIDVGKIKQVSLTNLQDDWMGVILVNSTQSDPLINTPFKTELMTRLKKLNEKIMIKVGPTIEYHKQPNKLHTVRSKISDSAPKYGDIYKSSTIYVRRGHPANSKSNKKPKNPGGLSGKPIKSKKSKHKSTHKHTHSHRSHRDAAKKQPLPSQKPVNPLSLAATAAQAAYNPKPDKTVPIKSSAIPAAKVSSKHSSKPSSKEKVAVKKASSSHKSSSAKQNQVSMPPSKGVEKNKEPLKETTATATANIPIPPPPPPMGQPKDPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKDTRNTVPVAATGAVNDVTNQKSSQIDNTISSAQEGVQFGSATVGPTSDNQSNPVGTFSDGLASALAARANKMRAESADDDDNDDGDDDDDW", "length": 1272 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P36046-1", "protein_name": "Mitochondrial intermembrane space import and assembly protein 40", "gene_name": "MIA40", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MLRNLVVRNACRNRPSIQVARGLCRHQTRRLMASSPQFGRNSNQEKTAGFIMGILSMAGALYFIAPNRKPLFASRKVESDKTAEEELSSGGEQSPENEDDNNSKSDENGDDNDSKNDETEAGPQLGGDKIGASKVAEDGELVVLAEEDNKSSEDKDTDESKVSTKDDEQSNEDNATANNQKDENISSENSEENTSDKTLDNNAGSSEKKDPEHSDDEKSQQGQSDDKTTTEDNNGEEESSKKTVSDSENSAKQSESSDEEKEELRKQEEKQMGPTEEEVQHEGAYNPDTGEINWDCPCLGGMAHGPCGEEFKSAFSCFVYSEAEPKGIDCVEKFQHMQDCFRKYPEHYAEQLKETSDDEEPQDKVKVNTIESAPNVSSAKENAAKKAEQSDVKKEPLNEESKP", "length": 403 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P37106-1", "protein_name": "Signal recognition particle subunit SRP54 1", "gene_name": "SRP-54A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIVNLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFKKEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDWSGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRIPLNQLFSMLPGISAEMMPKGHGEESRVKMKRYMTMMDSMTNKELDSPNPKIFNESRIMRIARGSGRLVREVMEMLEEYKRIAKTMKGIKIPKNGDMSKVIPPQMLKQMGGMSGLQSLMKQMGSAKDMMGMFGGGGK", "length": 479 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P38150-1", "protein_name": "Inactive deaminase YBR284W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MVQNNESVFFVECDSYKESPSTSPIRLDDLDGNDAVSDQGLAFDGDVGITSQARVRNPRAQIFEDSNTDVVLHLDDLDMVPLNTKFDMQMEMGSPMAMPAETPPPVEPLKTKDLAYSSLAHLPSYFFEQTHFRIDRKCLLEMSKLRRNYLTISKQDALSCPQLHSRVAGGYLKPVKEKLFGIRHFLDLEESNTVNLLQDGNYMTELFNSQINIPTFKEFREDFEWCLKIIRDRSLSRFSEKRLQYLVNKFPVFQHLHSKEEMRQSKKVPHKDFYNCRKIDLNLLLSGCFSQWQLTEFIWTKLRKEPDRVIHQAFNGSHITLSQLFKVNFEETGQFFNGLKIIDDSFLEWYKVIYLAKYHLVNDEMEIHTGSHGKQLRYYLIAKTFLEFDNYINGEYLAELLKTFLIKPQEESKYQLCQLSVDFQFYLHYDNSDVDNWWMVFANWLNHYNIFSNNIRWNIRISRIYPELYHTGKVKNFQEYLNLIFKPLFNAENYLHKSLGPILLKFLSQVSSIDLCIQDTDNYIWKNFTAVSCLPKDWTSGGDNPTISQYMYYVYVNLTKLNHIRQALHQNTFTLRSSCSPTSMNRTSQFSNTLNFTEHTEAILNNFLLACGGFLNAENLWNAPPSLVYLFYLSQIPMVVAPLNSIVDSKPTMLQEQAPTGLVLEPSKPYKKNPFMKFFEMGFKISLSSESILYNNSYTKEPIIEEYSVAASIYRLHSADLCELLRNSVITSGFSSTLKNKWLGVSLASHDYFVENTGFVDKWYDCKPNTSLEHNVPIIRRQYRSSTLAGEWRLIIA", "length": 797 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40002-1", "protein_name": "Transcriptional regulator MIT1", "gene_name": "MIT1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MDIEPTFKGYIEDEDDALLILQATLDGKLKHIPRRPYEIERPYLIVSGSIFVFIEEISGIKRWTDGVSWSPSRISGKFLIYKELDKENAGSNANATSSGSTDSAVITDGTSGARNNPSSSKIKLPPLKNHQFDLPPTMGHSSFESEQDTSISPSNRSNLPLKYTGLVKKTISVKLKRPPFNSIENLHIVSYYSVKDIKQNCLVTPKASPFLKDVRPSQELIVAMGNTTLGNVKNNSTTTGNGPNNINNKSNSSTPLNTVISTNNNSANINAAGSNQFTSANKNYYYKNDESSGYPITQFAPALPSTTLMYTANPPYITQSPDNTNATGMNTHVNNNNNNSNNSSNSNNSNNNNNNNNNNNNNNNNNINNINNVNTNAGNGNNPNRFHNASFAYNTTGDFINPQQQGQISYPFYYTTIPINNPNYYTTQPPNPVTNASTNENQGYSTSSTQHPYYGHPTESQSASAAAGATGTPGTAENVLPVSSMQPLLHQANNNSASSATSTAPYPVYSMNVNVPYYNSSASAYKRAQENTTSNTNAEPSGATSTNSGTMLSNPAYANSQYTPSQVYYQGFPQYAMASAQNPSMYQHQHQHPLPTVYPIATPQQNIMSSGHTLSTIGSDPQHHHYQQEPNDHKNFAMGHANNNILNITNNDTMNNLNTNTSTTTQ", "length": 666 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P42222-1", "protein_name": "Enolase-related protein 3", "gene_name": "ERR3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSITKVHARTVYDSRGNPTVEVEITTENGLFRAIVPSGASTGIHEAVELRDGNKSEWMGKGVTKAVSNVNSIIGPALIKSDLCVTNQKGIDELMISLDGTSNKSRLGANAILGVSLCVARAAAAQKGITLYKYIAELADARQDPFVIPVPFFNVLNGGAHAGGSLAMQEFKIAPVGAQSFAEAMRMGSEVYHHLKILAKEQYGPSAGNVGDEGGVAPDIDTAEDALDMIVKAINICGYEGRVKVGIDSAPSVFYKDGKYDLNFKEPNSDPSHWLSPAQLAEYYHSLLKKYPIISLEDPYAEDDWSSWSAFLKTVNVQIIADDLTCTNKTRIARAIEEKCANTLLLKLNQIGTLTESIEAANQAFDAGWGVMISHRSGETEDPFIADLVVGLRCGQIKSGALSRSERLAKYNELLRIEEELGDDCIYAGHRFHDGNKL", "length": 437 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P43356-1", "protein_name": "Melanoma-associated antigen 2", "gene_name": "MAGEA2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQQTASSSSTLVEVTLGEVPAADSPSPPHSPQGASSFSTTINYTLWRQSDEGSSNQEEEGPRMFPDLESEFQAAISRKMVELVHFLLLKYRAREPVTKAEMLESVLRNCQDFFPVIFSKASEYLQLVFGIEVVEVVPISHLYILVTCLGLSYDGLLGDNQVMPKTGLLIIVLAIIAIEGDCAPEEKIWEELSMLEVFEGREDSVFAHPRKLLMQDLVQENYLEYRQVPGSDPACYEFLWGPRALIETSYVKVLHHTLKIGGEPHISYPPLHERALREGEE", "length": 314 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43357-1", "protein_name": "Melanoma-associated antigen 3", "gene_name": "MAGEA3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQEAASSSSTLVEVTLGEVPAAESPDPPQSPQGASSLPTTMNYPLWSQSYEDSSNQEEEGPSTFPDLESEFQAALSRKVAELVHFLLLKYRAREPVTKAEMLGSVVGNWQYFFPVIFSKASSSLQLVFGIELMEVDPIGHLYIFATCLGLSYDGLLGDNQIMPKAGLLIIVLAIIAREGDCAPEEKIWEELSVLEVFEGREDSILGDPKKLLTQHFVQENYLEYRQVPGSDPACYEFLWGPRALVETSYVKVLHHMVKISGGPHISYPPLHEWVLREGEE", "length": 314 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43537-1", "protein_name": "Uncharacterized membrane protein YFL067W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MESIILSIAIFIGVLLGTSVGAGSGSSISPDVDAGSGSRTSPDVDAGSGSRISAGVGTFSGSSTSPDVDAGSGSSTSPDVGAGSGSSISAGVGSRIGTGIGSRIGTGIGTGIGSRISTSIGSRISPDVGTSSGNRISTGVSTGISTTMNARVAVLITAAILSAPVTAIALLEARR", "length": 175 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P46162-1", "protein_name": "Beta-defensin 4", "gene_name": "DEFB4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLAVLFLVLSAGSGFTQRVRNPQSCRWNMGVCIPFLCRVGMRQIGTCFGPRVPCCRR", "length": 63 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P46169-1", "protein_name": "Beta-defensin 11", "gene_name": "DEFB11", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLALLFLVLSAGSGISGPLSCRRNGGVCIPIRCPGPMRQIGTCFGRPVKCCRSW", "length": 60 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P47102-1", "protein_name": "ARF guanine-nucleotide exchange factor 1", "gene_name": "GEA1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MHDVPMETVLAVNPATMIVKECINLCSAMNKQSRDKSQTSVAALLGGGSDIFLSQSDSFVDSFHNLPTSSYHDPLISGLVQLRLKINDLKGLDSLNALELLKPFLEIVSASSVSGYTTSLALDSLQKVFTLKIINKTFNDIQIAVRETVVALTHCRFEASKQISDDSVLLKVVTLLRDIITSSFGDYLSDTIIYDVLQTTLSLACNTQRSEVLRKTAEVTIAGITVKLFTKLKLLDPPTKTEKYINDESYTDNNLKDDIIGTTTSDNDLSSTDDDSAVADDNKNEKPVQQVIREQENDEETAEKAENVEPNYGITVIKDYLGLLLSLVMPENRMKHTTSAMKLSLQLINAAIEISGDKFPLYPRLFSLISDPIFKSVLFIIQSSTQYSLLQATLQLFTSLVVILGDYLPMQIELTLRRIFEILEDTTISGDVSKQKPPAIRELIIEQLSILWIHSPAFFLQLFVNFDCNLDRSDLSIDFIKELTKFSLPAAAVNTSNNIPPICLEGVLSLIENIYNDLQRFDRAEFVKNQKEIDILKQRDRKTEFILCVETFNEKAKKGIQMLIEKGFIDSDSNRDIASFLFLNNGRLNKKTIGLLLCDPKKTSLLKEFIDLFDFKGLRVDEAIRILLTKFRLPGESQQIERIVEAFSSKYSADQSNDKVELEDKKAGKNGSESMTEDDIIHVQPDADSVFVLSYSIIMLNTDSHNPQVKDHMTFDDYSNNLRGCYNGKDFPRWYLHKIYTSIKVKEIVMPEEHHGNERWFEDAWNNLISSTSVMTEMQRDFTNPISKLAQIDILQYEKAIFSNVRDIILKTLFKIFTVASSDQISLRILDAISKCTFINYYFSFDQSYNDTVLHLGEMTTLAQSSAKAVELDVDSIPLVEIFVEDTGSKISVSNQSIRLGQNFKAQLCTVLYFQIIKEISDPSIVSTRLWNQIVQLILKLFENLLMEPNLPFFTNFHSLLKLPELPLPDPDISIRKAKMSRSLLSTFASYLKGDEEPSEEDIDFSIKAFECVKASHPLSSVFENNQLVSPKMIETLLSSLVIEKTSENSPYFEQELLFLLEISIILISEASYGQEFGALIADHMINISNLDGLSKEAIARLASYKMFLVSRFDNPRDILSDLIEHDFLVKNEIFNTKYYESEWGKQVINDLFTHLNDVKYNERALKNVKFWNFLRILISAKDRQFAVYTFLEKYIQNGDIFVDDGNFMNILSLLDEMSCAGAVGTKWEQNYENSVEDGCEAPESNPYRSIIDLSSRSINITADLLSTVGRSNSALNKNEIIAAIQGLAHQCLNPCDELGMQALQALENILLSRASQLRTEKVAVDNLLETGLLPIFELDEIQDVKMKRITSILSVLSKIFLGQLVEGVTSNETFLRVLNVFNKYVDDPTVERQLQELIISKREIEKE", "length": 1408 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P53563-1", "protein_name": "Bcl-2-like protein 1", "gene_name": "Bcl2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEPERETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK", "length": 233 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P56840-1", "protein_name": "Protein TCL1B1", "gene_name": "Tcl1b1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAAFDPLGPLPVYLVSVRLGIYEDEHHRVWIVANVETSHSSHGNRRRTHVTVHLWKLIPQQVIPFNPLNYDFLPTTWKLESRNIYWATDGTHWRLLDHSQLGDTEQLILMLVLG", "length": 116 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56841-1", "protein_name": "Protein TCL1B2", "gene_name": "Tcl1b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAGFYPPRLLPQVLISTGPGFYEDEHHRLWMVAKLETCSHSPYCNKIETCVTVHLWQMTRYPQEPAPYNPMNYNFLPMTWRLASMNTYRGTDAMHWRLLNHSQVGDTVQLILMLE", "length": 117 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56842-1", "protein_name": "Protein TCL1B3", "gene_name": "Tcl1b3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVHFPWMPFPPRFLVCTRDDIYEDENGRQWVVAKVETSRSPYGSRIETCITVHLQHMTTIPQEPTPQQPINNNSLPTMWRLESMNTYTGTDGTYWRLLDHSQMGDTLQLILDIVICEVD", "length": 122 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56844-1", "protein_name": "Protein TCL1B4", "gene_name": "Tcl1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVRFPCMPFPPCFLVCTRDDIYEDEHGRQWVAAKVETSSHSPYCSKIETCVTVHLWQMTTLFQEPSPDSLKTFNFLPRTWRLESRNTYRGADAMHWRLVNHSQFYGTEELVLMLDSR", "length": 120 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P59528-1", "protein_name": "Taste receptor type 2 member 123", "gene_name": "Tas2r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSQKINYSHLFTFSITLYVEIVTGILGHGFIALVNIMDWVKRRRISSVDQILTALALTRFIYVLSMLICILLFMLCPHLPRRSEMLSAMGIFWVVNSHFSIWLTTCLGVFYFLKIANFSNSFFLYLKWRVKKVILIIILASLIFLTLHILSLGIYDQFSIAAYVGNMSYSLTDLTQFSSTFLFSNSSNVFLITNSSHVFLPINSLFMLIPFTVSLVAFLMLIFSLWKHHKKMQVNAKQPRDVSTMAHIKALQTVFSFLLLYAIYLLFLIIGILNLGLMEKIVILIFDHISGAVFPISHSFVLILGNSKLRQASLSVLPCLRCQSKDMDTMGL", "length": 333 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P61314-1", "protein_name": "Large ribosomal subunit protein eL15", "gene_name": "Rpl15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR", "length": 204 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62246-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "Rps15a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62425-1", "protein_name": "Large ribosomal subunit protein eL8", "gene_name": "Rpl7a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62802-1", "protein_name": "Histone H4", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P62963-1", "protein_name": "Profilin-1", "gene_name": "Pfn1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGWNAYIDSLMADGTCQDAAIVGYKDSPSVWAAVPGKTFVSITPAEVGVLVGKDRSSFFVNGLTLGGQKCSVIRDSLLQDGEFTMDLRTKSTGGAPTFNVTVTMTAKTLVLLMGKEGVHGGLINKKCYEMASHLRRSQY", "length": 140 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62982-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "Rps27a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMGSHFDRHYCGKCCLTYCFNKPEDK", "length": 156 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P70709-1", "protein_name": "Eosinophil cationic protein", "gene_name": "Rnase3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGLKLLESRLCLLLSLGLVLMLASCQPPTPSQWFEIQHIYNRAYPRCNDAMRHRNRFTGHCKDINTFLHTSFASVVGVCGNRNIPCGNRTYRNCHNSRYRVSITFCNLTTPARIYTQCRYQTTRSRKFYTVGCDPRTPRDSPMYPVVPVHLDRIF", "length": 155 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P81278-1", "protein_name": "Prolactin-releasing peptide", "gene_name": "Prlh", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALKTWLLCLLLLSLVLPGASSRAHQHSMETRTPDINPAWYTGRGIRPVGRFGRRRATPRDVTGLGQLSCLPLDGRTKFSQRG", "length": 83 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83883-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "Rpl36a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83884-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "RPL36A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P97876-1", "protein_name": "Basic leucine zipper transcriptional factor ATF-like 3", "gene_name": "Batf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQGPPAGGVLQSSVAAPGNQPQSPKDDDRKVRRREKNRVAAQRSRKKQTQKSDKLHEEHESLEQENSVLRREIAKLKEELRHLTEALKEHEKMCPLLLCPMNFVQLRPDPVASWSAHDAPDHPSFIWLGTLV", "length": 133 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q00729-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2bc1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEVSAKGTTISKKGFKKAVTKTQKKEGRKRKRCRKESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVTDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK", "length": 127 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q01534-1", "protein_name": "Testis-specific Y-encoded protein 1", "gene_name": "TSPY1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESAPEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVGEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS", "length": 308 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q03764-1", "protein_name": "Ethanolamine kinase", "gene_name": "EKI1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MYTNYSLTSSDAMPRTYLVGTASPEMSKKKRQSANCDKPTRRVIHIIDTNEHSEVDLKNELPITCTNEDGEMTSSSWTSQTANDFLKLAYVNAKLDPSLPSQYFKQDIINVLQSLEIPGWSVPGSKESSLNKNLLTLTQIKGALTNVIYKIHYPNLPPLLMRIFGDSIDSVIDREYELKVIARLSFYDLGPKLEGFFENGRFEKYIEGSRTSTQADFIDRDTSIKIAKKLKELHCTVPLTHKEITDQPSCWTTFDQWIKLIDSHKEWVSNNVNISENLRCSSWNFFLKSFKNYKRWLYNDSAFTSKLLREDDKDSMINSGLKMVFCHNDLQHGNLLFKSKGKDDISVGDLTIIDFEYAGPNPVVFDLSNHLNEWMQDYNDVQSFKSHIDKYPKEEDILVFAQSYINHMNENHVKIASQEVRILYNLIIEWRPCTQLFWCLWALLQSGRLPQRPLIEGEKLMSEKAGLGDETHLMEHKNKENGKYDCSEDDSFNYLGFCKEKMSVFWGDLITLGVIDKDCPDIGKTDYLDTKLIF", "length": 534 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q04902-1", "protein_name": "Probable glutathione-independent glyoxalase SNO4", "gene_name": "SNO4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGFGWDEHYLPKSFIGGEDKMNFETKNSAFNKALARIKTANEVNASDYKIFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGLIDIKTTRPLIEGKAITGFPLEGEIALGVDDILRSRKLTTVERVANKNRAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINALYS", "length": 237 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q0D2J5-1", "protein_name": "Zinc finger protein 763", "gene_name": "ZNF763", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDPVACEDVAVNFTQEEWALLDISQRKLYREVMLETFRNLTSIGKKWKDQNIEYEYQNPRRNFRSLIEGNVNEIKEDSHCGETFTQVPDDRLNFQEKKASPEAKSCDNFVCGEVGIGNSSFNMNIRGDIGHKAYEYQDYAPKPYKCQQPKKAFRYHPSFRTQERNHTGEKPYACKECGKTFISHSGIRRRMVMHSGDGPYKCKFCGKAVHCLRLYLIHERTHTGEKPYECKQCVKSFSYSATHRIHERTHTGEKPYECQQCGKAFHSSSSFQAHKRTHTGGKPYECKQCGKSFSWCHSFQIHERTHTGEKPCECSKCNKAFRSYRSYLRHKRSHTGEKPYQCKECRKAFTYPSSLRRHERTHSAKKPYECKQCGKALSYKFSNTPKNALWRKTL", "length": 394 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q0WX57-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 24", "gene_name": "USP17L30", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLRGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q1LYG5-1", "protein_name": "Elongation factor 2a.1", "gene_name": "eef2a.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MENFNVDQIRATMDKKSNIRNMSVIGAFDHGKSTLTDWLVSEAGIVSSARAGETRFMDTRRDEQERCITIKSTAISIFYELAEKDLAFIKECKDGSGFLLNLIDSPGHVDFSSEVTAALRITDGALLVVDCVSGVCLQTETVLRQAIGERIKPVLMINKMDRALLELQLVPEELYQIFQRIVEKVNVTISTYAEDEKGPMGNVMIDPVIGNLAFGSGLHGWAFTLKQFAELYVKKFAGKAQLGPEEYIKKVEDMIKRLWGDSYFDSTTGKFSESATSPDGKKLPRTFVHLVLDPIFKVFDAIMNFKKEETVKLIEKMGIKLDVEDKEKEGKILLKAVMRCWLPAGEALLQMITIHLPSPVTAQIYRCELLYEGPGDDEAAMGIKNCDPKAPLMMYISKMIPTSDKGCFYAFGRVFSGCVSTGLNVRIMGPNFTPGKKDDLYLKPIQRTVLMMGRYVEPIEDVPCGNIVGLLGVDQFLVKTGTITTFTKAYNMRVMKFSVSPVVRVSVEVMDPADLPKLVEGLKHLAKSDPMLQCIIEDTGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPFASYRETVSDGSKQLCLAKTPNKHSRLFMKACPLADGLAEDIDKGRVTASQEMNARAQYLAENYKWEVTEARKIWCFGPEGTGPNILVDLTKRVQYLNEIKDSVIAGFQWATREGVLCAENMRGIRFDIHDATLTSTAIHRGPGQIIVATRRVLYGCQLTAEPRLSEPIYLVEMQCPESVIGNVYGELVRRRGVVFSESQVMGTPVYLLKAYLPVSESFGFTADLCANTSGQAFSQCVFDHWQILPGDPMDPTSKVAHIMADIRKSKGLDEAIPALHCYLD", "length": 854 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q1PEY5-1", "protein_name": "Probable 3-hydroxyisobutyryl-CoA hydrolase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASHSQVLVEEKSSVRILTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQGRAFSAGGDIPPIVRDILQGKLIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSISLTALEAELYKVGSSNQTFISTILDAYAEYPHLNQHSSYHRLDVIDRCFSKRTVEEIFSALEREVTQKPNDWLLATIQALEKASPSCLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGDISKDFVEGCRAVLIDKDRNPKWQPRRLEDVTDSMVDQYFERVEDEEGWEDLKFPPRNNLPALAIAAKL", "length": 378 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1ZXA5-1", "protein_name": "ADP-ribosylation factor-like protein DDB_G0292332", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDFIISFIKNLFGFLTIKKVMILGVENVGKTTLLYNIYKFYSENITTTTLSSLPIPIPTNGFNVESIVIEQVKFDIWDIGGKETNRICYRHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQISLKNVPFLLVANKQDLKQQTIEIDEILKTYFDKSSINETILMSQNNNDDLIKCINWIFSN", "length": 186 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q1ZXJ4-1", "protein_name": "Acetyl-coenzyme A transporter 1", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLFTLLKRHFGNELNNIVWLVLLYLIQGIPIGLSFGTIPFLLHKHATYTQIGIFTISTYPYSLKLLWSPIVDSYFVQSFGRRKSWIVPIQILAGIVFITISFFIETLLEHAETKIIYITIVFFLLIFLMATQDIAVDAWALTILSKPYLHYASTCQTIGLNTGYFLSYTIFLTLSSPKFANKFLRSVPSEEGIITLPGYLQFWGILFIILSIYLAFFKDEESTTITTTTTRHDNYNNNNNDDKNKQVKSKIENESIESKSMRSSPSSLSPSLLSSPVKKQNKKNKQHISIDKKDITIIKENNENNEIIDNNNSNNNYDNGKKSIVQETYGMDISESDLTPKQVYYLLWKIITLPHIKILSILFIISKIVFQPNESALNLKLLEKGLRKEDIASFSLIQFPSIIIFSIISSKWVKNKPLTIWSNAYLVGVFFILVNMCSVFYFPNLNGGEISWSHFFLLLMISLFSSFSYNLMSVSQGSFFLKISDKSIGGTYVTLLNTIANFAGTYPKLFILMLIDKLTTSECIVNISNDNSSSSSSSSSLISTSSNNLTTTTTIIQEQQQQVIIHDNISKELCAEQNGKYRIERDGYYLVATGAIIYGVFIYFVLKRYLTPIEKLKL", "length": 618 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q23888-1", "protein_name": "Large ribosomal subunit protein uL2m", "gene_name": "mrpl2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVLNWRGVKSRLYSGKRRIDGRNKGLIAIRSRGGALKRKYRYIEHYKQKWMDKWLFVMRIEYDPNRSAHIALCSILKEGIYFYVISIAKLEVGSLIITSALKLGTLQVGNTTKIKNIPEGLLINNIELIENSGSKISRAAGTSSLIIKKYNKKYSLVKLSSKECRLISNECYATIGTVSNIERKLKQNKKASYSRKRGIRPIVRGLAMNPVDHPHGGRTKGGVHWKSFSGKLAYNVSSRKKTKMTSRYIIIGHRKQKIMDKQIKNG", "length": 266 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q24113-1", "protein_name": "Protein no-on-transient A", "gene_name": "nonA-l", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MEGAVKKNSLNSSPLPQRQQRGNSTNKNLGKPTPPKLNAASDGNPAEKKARLGGNTQNGGGVAGGGGTGGGGGGGGATGGVEFSRNRNRGGNQNENRQGFQVANNSHQKQINESPKPAAGNVPAKNNELSAGGGGQNQPNHSNKGQGNQGDQGEQGNQGPNFRGRGGGPNQPNQNANQEQSNGYPGNQGDNKGGQGQRGAGGGKHQRGNRSRRSGGSGIMNSSMGGGGQRGEDFFIAQRLLDISGPTHELPPIELPTDNKFVGRNRLYVGNLTSDTTDDDLREMFKPYGEIGDIFSNPEKNFTFLRLDYYQNAEKAKRALDGSLRKGRVLRVRFAPNAIVRVTNLNQFVSNELLHQSFEIFGPIERAVICVDDRGKHTGEGIVEFAKKSSASACLRLCNEKCFFLTASLRPCLVEPMEVNNDNDGLPDKTLNKKSLEFRHERSVGPRFACLNSFEHEYGSRWKQLHDLFKSKQDSLKRELKMEEDKLEAQMEYARYEQETELLRQELKKRELDNERMKLEWEMREKQAEEIRKREEEYMHRYQNQLLRHEEDMRARQQENDLLMQAKKLNMILDQQEGFGGSNSGFEHFDSPFEVFGNNSNNSTMAGPGGPDNSDGNQHGHIDSWGHRRF", "length": 630 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q2PRK7-1", "protein_name": "Odorant receptor 106-10", "gene_name": "or80a10", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANETFVKNVDSFIITGFDHLQNQKLLGSLILISYMFILLGNGINLCIISTDRHLHKPMYILICNLAVVDIMYSSTCSTTMISVLLAEIKTVSYYSCISRTYFFNLGDLTECMALTLMAIDRLIAINLPLRYHSFVTNSRILWLIFLTWIFSFAVIGFLTYVADTLPYCQPIIKYVFCSYSSLVRAACVDPEPYFAISTVYSMVTLCGLFPFILCTYAVLAYSVTKLANSSRKQMINTCLSHIIVLFSFYLPKIVYILLTRIGLVLTLTERNAVLIVSCFVSLLVNPTVYCIRTKGIRKRITDIFLYTQKITK", "length": 313 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2YDJ5-1", "protein_name": "Uncharacterized protein CXorf66 homolog", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIVIGTLITGYMVSCTCLLHYSCDSEEAHTAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKPVSQVSPSYPEKAIKSTWPPSLQCRAKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSRNN", "length": 361 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3L180-1", "protein_name": "Alpha-defensin 26", "gene_name": "Defa26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALFLLAFQVQADPIQNTDEETNTEVQPQEEDQAVSVSFGNPEGSDLQEESLRDLGCYCRKRGCTRRERINGTCRKGHLMYTLCCL", "length": 93 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3TR54-1", "protein_name": "Gasdermin-C4", "gene_name": "Gsdmc4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGYSFDRASKDVVKKLQGRDLRPVECLSDATKFRLFHILQETPRSGWETEDIPVGFTLLDLLEPNFPVPEPEVSAPKPFIHVQSTDLEANLNVADIARGGVGYVGYGGYNIEVQSTSIPNPKLEILQNRKLLDKLPTFMKFCRMERKNLYVVTEAYEVSKDTMLTGLSSVNLLVKGFFKQLFKVRGKAGRSEKYSIPIPKGSVLAYKKQQLVIENNTCVILPSATKKKMTFPDRPLKLYDLPVTLRYQEEVIETGSWIDDIDPIGTIEEPANLNFMCLQHEVSEQTQLLAELSKDVQEVVFSSFLHMLSDRDVLYDLMKMLELNQLGHMDGPGGKILDELRKDSSTPHDVLKDLNLYLLQALLVLSDTQLCLLAQSVKMGLLPHQVELVKSILQTNFKYSSNTPFTLQPQLLAPLQGEGLAITYELLEECGLKMELNNPRSTWDLEAKMPLSALYGSLSFLQQLQKANSSSKPSLSPGYI", "length": 480 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3U0I6-1", "protein_name": "Endoregulin", "gene_name": "Erln", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQMVPPRSIQNEDFWKNPWDVGGLTVIGLFTSTFLLFVLFAVVFGYVEKAVFEEE", "length": 56 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3URS2-1", "protein_name": "Zinc finger and SCAN domain containing protein 4F", "gene_name": "Zscan4f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIMQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3ZCQ0-1", "protein_name": "Required for drug-induced death protein 1", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVGARLRSKASSLVGRGPLGRLRRAGDEETDAIVEHLEGEDEDPESQDCEREEDGRRAGTPSARRVHLAALPERYDSLEEPAPGDKPKKRYRRKLKKYGKNVGKAISKGCRYIVIGLQGFAAAYSAPFGVATSVVSFVR", "length": 140 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI3-1", "protein_name": "Defensin alpha 3", "gene_name": "Defa3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGTLTLLTTLLLLALHTQAESPQGCTEDQKLLIMEDQDISISFTGDKGTALQDADVKSGVICNCRPRGCSFKERVYGECGYNGHILRLCCQPLNTMNKKSPSVI", "length": 104 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI6-1", "protein_name": "Defensin alpha 8", "gene_name": "Defa8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKTLVLLSALVLLAFQVQADHIQEAEEETKTEEQPADEDQDMSVSFEGPEASALQNLEIGWPLKQCHCRKFCRPYEKAEGSCRPGLFIKRKICCIQQWTPGRT", "length": 103 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4KL71-1", "protein_name": "Small proline-rich protein 2A3", "gene_name": "Sprr2a3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q504N7-1", "protein_name": "Pyrin and HIN domain-containing protein 1-like", "gene_name": "Ifi214", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLTGLMGINDHDFRMVKSLLSKELKLNKMQDEYDRVKIADLMEDKFPKDAGVVQLIKLYKQIPGLGDIANKLKNEKAKAKRKGKGKRKTAAKRQRQEEPSTSQPMSTTNEDAEPESGRSTPDTQVAQLSLPTASRRNQAIQISPTIASSSGQTSSRSSETLQSIIQSPETPTRSSSRILDPPVSLGTAYSSAQALGVLLATPAKRQRLKNVPKEPSEENGYQQGSKKVMVLKVTEPFAYDMKGEKMFHATVATETEFFRVKVFDIVLKEKFIPNKVLTISNYVGCNGFINIYSASSVSEVNDGEPMNIPLSLRKSANRTPKINYLCSKRRGIFVNGVFTVCKKEERGYYICYEIGDDTGMMEVEVYGRLTNIACNPGDKLRLML", "length": 393 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q54B59-1", "protein_name": "O-methyltransferase 12", "gene_name": "omt12", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDWDKTMDLLFGFVTGHIHSRMFETILKFSICDLLEDGPKHYSEISKIIGFKNESYCYRLMRYFVPYKLFNESVVQVGLFSKTPSSTQFSKNGTLKNLGRFHCQDHHYRIFESLPKTLEMGKNQGPSSIGLSSFWEHFETDESYKQLFHNAMKDYTSLIIDRLISKISLSPNFKTVVDIGGSHGFLIGKLLESNPNIHGINFDLENIINSSTSKNENFQHPRLKHVSGDFFNSVPEADCYILKYILHDWSDEKCITILNNIHKSLKPNGKLFINDLVLDPSNYTKEAVFKDILMMQYFDAKERSINEWHQLFEKCGFKIDSVDTSISPQLMIVSKINSSNINLNDCTNFNSEIVEEKLKNSLPQFVNC", "length": 369 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B60-1", "protein_name": "Probable inactive O-methyltransferase 11", "gene_name": "omt11", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MECSESLELVDKFACGHILSRMFNVVMKHSICDLLEDGPKHYSEISKIIGFKDDSYCYRLMRYFVPRKLFKESVVQVGVFSKTPFSTEFSNNGTLKKLAKFHCNSFHYKLSQVLPETLEIGENQGPSSIGLSDYWEQIEKNEIYKNEFNDGMIGYTTHILKFLKGKIDLSKFETVVDIGGSHGYLIGSLLDRYPNVNGINFDTDMVINSSNEKYQHPRLKHVAGDFFKSVPEADCYLMKLILRCFSDEKCCELLKIISKSMKSNAKIIILDIILDSSKYLNFDTYLDILMMETLDGKQRSLSEWIKLFEMSGFKIDKYESGSPNYLIISKE", "length": 331 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B86-1", "protein_name": "Hly-III related family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPRLDHKKNKEEKDNEPLMMVNNYNIGIQTDNNQEDIQNDYHHFNDLSINIKNNKNNNNNNNKCNSLHHKHYHNRFIINGGNNNNDNNNNNNGDDCCANIELFVDLMLSENEYILSGFRLHTKNSYMECTKSIFKLHNDTLNIWSHLLGALFYLVLFFTSIIKIIKLNNNDGGGGGGIGNNFILNSDEIKLLETIDLPSNFNYLFFQLSCFICFLSSTIYHTYRSHSIVVFKTTLMLDVASIALLILSSVCLIIDSELSCWPYFKRIYLFSFLILILISFLSLPKIMREKRYGLRTFLFAILALQGLVGHLFKIYLQGYFDKDPNQFYNLIGAYTLFGLALSIRRFKVPESFKPGHFDVWVNITFNIVYNII", "length": 372 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54BG8-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGKIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54C66-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKTKKYKNPFPTNSYKEPENDSDNEYILHNEEDNEDYGSNNNNINNDGFSYEDNIENSDTEDEREDYGYINYNTNNEEDDEPIDLSTPIKKKKANNKSFKPPYKNTTTTTTTTTTTPPTPPPSKSNNNNNNNNNNNNNNNNNKNKENINKESEYELNKFLDLYNDFKSESDNKVKPTATTTTTTTTTTSTSTSKLNKDKKGVIVIESDEEKEDNTIKINKRNGKRKEGEQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQGNEDNLKSENFNKFKKLKSFSNQPTPLPPMLSNPFLNNSGNSHNNNNNRILFNSQFTNASNLNNNINNNINNNINNNINNNINNNINNRNNNTNNYTNNNNNNNNNNNNTNNNNSNNNINNNNYNNNNNNSFSFLPIRSNTLPTIVTRRTGIQSSSSDNGNSNSNHSSSMNKRNTSKSNNKKSTTTTKTVLPPPLSSRTQEEEDYALALSISEGLNGGSGGGSGSGSGSSDNSTKTKRSKSENDLPNEETRHQVEMDRRFAEQLHREQHENINQIQQLQRRLHLNQQRTNNINRNHHGDEDEEDIEMLNLRAYQQIQQQFNQHFNQQLNQLANHPLANLFSHASRGRGRGARRIPHHPHHHHHPHQAQYLTGLSQEQLNLMTRDFSSNDYELLLQLDENINNKGATTSDIENLPVHTLNKPTATTTSTTTTTNSSTSDDNKKNEPTTDVTCCICLCEMEPGDAVRTLPCKHFFHVSCIDQWLKVNKVCPIDKKAIDEK", "length": 766 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54CY8-1", "protein_name": "Obg-like ATPase homolog", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKGIKLFNNFTNTKQILFFRSFSTAAKGDRLKASHYVKTRGSCKSISIVGLPNIGKSTFFNALTSSNAAMAANFPFCTIDPNIGKVFVPDERLDYISDLLKTKSKIGVQLEFVDVAGLIKGAADGEGLGNKFLGNIRQTSLICHLVRCFEDKGITHVSDEIDPIRDIETIETELILADLQSLEKMLTEGKKKQSNPELQMKFDLVKRISEYLHKGLPARDVEITDMEWPVFHSLHLLTSKPTIYTCNVAEGDAATGNKYTDLVKEYSKSKGLEIEPVVISAKIESELANMEGNDETKKEFLQLYGLENNGLSKVINGAYKLLGLQSYYTASSNECHAWTFKAGWTAPKAAGVIHSDFEKGFIKCDTISYNDFIECKGDEKIAKEKGKQRSEGKAYIVNDGDILFFKFN", "length": 409 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54D44-1", "protein_name": "Probable polyketide synthase 42", "gene_name": "pks42", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIESQREFNCIGGDNQNGVAVIGVGFKIPLDLENCLSSPSELYSALFNEFDSVTKNTSSRWSDNYFKNGDIVSLSAGLLPLREIKSFDPTFFGINPSDADLIDPQQRLLLKCVWNALEDGGIDPISIRSSDTSVYIGCSTIDYFLLNRNPVDPHNHGIQTASYSIPNRISYCFDFRGESLFVDTACSSSLNAVHLGYNSIINLKSKLSIVGGSNLILDPQNSIFFSKQQVNGPSGKCNSFSEEADGFVRSETVGVVVLKNLKDAIKDGDRIYCVIQGSNSNVDGNYEKLNYISPSKLSQAENITKALKSTNGAVNASDIDYFECHGTGTPTGDPIELEGISIALNRTQQSTTLSNPLLIGSIKSNIGHGEASSGIASLIKCCVMFKYRQFLPNINFKTPNPLIKFKEWNLKVVTEPVPFNNNKQTIMAINNFGVSGSNCCIILSEYKSNNNNNNDFKATTHLKSKKFIIPFSSNSSTSLDNYKSLLSNETNNFQDFVIKQINNKSTSLIQRSVIIASNWSEFNESSNEIQSNIKKSIISNITIKKKNAVTVFVFCGQGSQYNKMALSLYENEHIFKSTMDKLDKELSKHYGYSILEKLRSITDEDLVTIHQPILAIPVNVMVQVSLYELYKHWGIKSDIMVGHSFGEIACSYCSGMVDFKTLCYLTYHRSVAQNKTIGSGKMLSINIGAKEYLDSYSTKYPSVEIACYNSETSIVIAGNEELLNEISKDLKSKDIFTAMLPSLSAFHTTHQSVIKDDICSLNFKSTLSKITVFSTVTSNQFGINNNNNNNNNQLNSNYLFQNVIQPVKFSETISNIYKYIESNDMGNEITFIEIAPHPTLQYYLNQMKSQQSEYFNNGEKISIYSACNKKKNDYNEFLKTISTLFVNGYNNINFKSQIINNNNNDNNNNFNLPLYQWDDNEYYKIHPTWKKANKNGPSINHLGNLNDSSIKSFKTYINTRKPQFQWLKGHSLKGKVVFPGMGYISNLLSVYNMNQDITINEIQFKSAFILVDGVNNCLETSIVPLTKNEFNIKFHFKDLKTNKWVLCANANYSLFKHNDNNDKLDIEKLKSNCNYTIISKDELYNNIRAKSGLIYKGLFQGVKEAFIGNRCSLTVLSLNEIENQQEFKHLLENRNFNSLFNTAILDSCLHGSLHSKEQSQIYFDKCEGFKYYSNNINLATSKRNEYKEINVYIETNPVINSTVIVSLKIMLPDGTLLIEIQKVVCKSSIPIIDSTSVIQPSPKDLHTPYYQPKNSLIKPPQSFKHLHCMKEFASIESDNREMVYMSIYHLIFKAINARSPTKINLESLENLTLDQFKELIKDSAANIQRSNQFIYECLKLYHTNHSNYKKNQIKDFIKECEDFNGYNQIIFKTIKIYAKSLFPLPDDDPFTDTIQSLFEDDQLENVYIHLKHLYPVNNLLSEIVFQSIKPIINQTSTFRILEIGAGYGTISQLIFDKLEQLLADNFTSSRIDIEYTFTDISNTFLPRAKERYSKYKRFNIIYKLLDLELPLTEGIQDFRPLYYDIVVMSNVLHVVKDINFSTNEIYKVLKQNGQLIFVEPTYKNLYLDTIFGIFPQWWSFNDDIRTDRCCLEPSKWFEFLETINFKDTIILGQDNKEILKNVENSIILVQTRKPSQLELSINNSPSTNQFKSFENIILYTDDNQQPNDCSEIIDLLKSLELPIKIINNIDQFNQIIKTQYNNNNNNNNNNNNNNNNNNNNTNNNLIIFLKSVNQLNTNNYKDITFEYVQINQILVKLELEENYKLLLITNNSQSSNYLSNSLIGTSRYLFADIVSSKLDIITIDFDTVSIKNHQNVISVINHLLDSKDNSEREYYIINNEINIERYKNESNIKHQLKSKTFQENKDELMVQLDSNLEYRLKSKSKQELKSTHVEIQVKAIGINYKDYATYSGLIDSIIEIDKDKEKDENYDQNYPSIGNDFSGVITRIGSDVRKFKVGDEVCGLAPKTSASHIITEEGYLCKKPSNISHSEAASSVTVYTTSFQSIYSIGDLKKNETILIHSGSGGIGLSALEILKWKNHQGYIFATVGSEDKVKYLTDTYGSFITGIYSSRDKDYQDQIKEKLKSLGCDIDHQGVDLILNTLSVEYMDSNFKCLNQKGRCIDLSITHLTPFDYMDYNKFKFNVSYGNIELVVLPSKIIKDHLKKMLKAFSLGSLRFIPIVEFSNLNIRNAVEYINQRKHIGKIVVKNDVDFINKLFIEQQQQQNSVENNEILMKDKYDISNLELGKNILLTGQTGIILTILKWLYKHSNNSIENIIIISKSKLKWELELFINESTNNRIKIHYKQADVGNNNELNQCFEELRLRHSIEDINSIFHFAFINDIGQFEDVNMNRMDIAHHAKAIGSLNLHNQSIERKWNIKQFVLASSALSVFGGDNQCCYISACSVLDSLSKYRKSIGLPSLSINFGGVTSTGFVSRSGAVEANLESSIINLITPQSLISSLDLFIQNSQTFSNYTHFNFIYDNIESYSLNRMLFKFDYLINQHSSLVSNKRLGGINENNNIGDLLVSKIGELLSIEPSKLNLDFRLVDYGLDSLVIVQLKNFIDKQFQPHLISILQLQNNKISTTIEIIIKGYNNNQNKKIKNEQSNDIPSVVQKETIKDNNENKDDIKIDMDDKKENLKGKKENIDDKKENNN", "length": 2655 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54E06-1", "protein_name": "Transmembrane protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTIINNDNISLATSAKLSQFIVSGDYKGPFTIIGLKTKILSFSLVIEFILLKIELIKERKDGLKINFDDSISGSCNYELNYTKQDTLFQRFQSKFKIEHTINPENGETINTGITLKKLFIISIPMSILFVALNWIWMLAISMTEVSISTALYLKILKTISVIIFMGGIVGIAITTVGTSKGEYPHAIKGEILMIISAAMWGLYEVLTSKFIGDANRTIVHTYMGLIAFVNLILGIPVIVILNVTNFEPFSVPSISVFGMLLLNAFVGFSVNYLINWGLSVTSPLFVRSGELMVIVATLLFDIIIKHMKLPLLALPGYSLIVIGFILSVYIESRDIKQQQEKEKEKQKNNNGETESLLNY", "length": 359 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EC9-1", "protein_name": "DUF781 family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKIILIFFLINNIFSIVVSSTKLNPWVFEERIKLYDILINSTKVEIFGDDNLNNCFQGFKIQLEWQKTTGRSMIIDNSNISVNSWWGSMNYYESIIPFISAMNLGIIQPPIELVNIGDDRFCTDYSECDKELMEPWDLYFQFLIKIKDEKYSYSIQQQILKYNWDGHMKSLSIGLKLFNDKLNYLSKNEIKFSTGFVHFVDIISLINFNTNYSQILPIFDSLPPRMLTNSDHPPFFKGFTRTQNFYTVSVLSINELHENQILWNYFLNLLKTKTENEKCRDFINQEIINFTKYPESTLVKLLLKLLLNNC", "length": 312 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED6-1", "protein_name": "Probable polyketide synthase 41", "gene_name": "pks41", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDSKNLVDENCNKVAIIGIGFRFPNLKGDITPNELWSKLLNRYDGIVKNDRWNESFFKSGDISTNYAGFIPFEELKSFDPLFFGINPSEGIHMCPQQRLLLKCTWEALEDSGIDPIEIRGSNTSVFIGCSGADYQNLNKNDNKVQQEIFSSSTHSISNRVSYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNISKSYSRLNILSKDGKCKSFDAGADGYVRSDAAGIAILKNLNDAIKDDNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGQVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSDNPLLIGSFKPNIGHTESASGISSLIKCCLILKNQCFVPNLNFNKPNPLIKFDQWNLKVVTDPIDFSTLNYINKRVSIAINNFGVTGSNCCLIVSSFKGNQIRNNINNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVVIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNVTMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLNEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKKDGVFCAILGSPTSFHTSSQLSVKDEILKISFKSKQPTIPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEVIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSDHNNTNNQTRVNLPLYQWEDQEYWKLDNLHQYHLSNGPSINHLGISNSNHTPIKSYQTHINIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGESKTDTNPNKELPDILISFIEFKTPLIFMDGISQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGPNLNEDDEQSLFMYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVDKCYLGYNCSLSEISIIQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEELTYYSSKVPKTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDPLAMEYPTNEIYSCNLQSKDSLIPSLSSFDHIFKRKIPNEYVDQINIYESFIPKLLFSNINKRCPEITIDEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRFNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIIGDGIFGVFDQWWSFQDTEIRKDRCCMKQKTWYKLLKSVNFNDDIRMTPELTCFVIQAQKPSISNLSFSKSETTNYDSIIVFGNKYASNLSNHFIKSIDNGNLQFISTIEELNKIGKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNCKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITRISTGSKEFKVGDHVYGIGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITHYSIEKVKESIEFINERVHMGKIIINHENQDSIINELIEKQKSINKFDQSIFKQNYKLEPSLLGRNILLTGQSGIVLEILKWILRNSENNSIGNIIILSKSSIKWEMEYLINKVKLINKLGNFFNNIKFHFKSVDISDSGLIDESINKLLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKLKNFIMSSSVSSKTSTANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIESTGFVSRNESVAALLSGEGFIPISANLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISEILSTDILKLNKDIILVDYGIDSLVIIQLKNWVDKEFSIPNELTIQKIQNSTINSFIQLVKNSMDKNKK", "length": 2542 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED7-1", "protein_name": "Probable polyketide synthase 40", "gene_name": "pks40", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDYKNKYQSNENCNKVAIIGIGFRFPNLKGDLTPNGLWSQLLNKYDGIVKNDRWNESFYKTGDIPTKYAGLIPFEELKSFDPLFFGINPSEVIHMCPQQRILLKCTWEALEDSGIDPIEIRDSNTSVFLGCSNFDYQNLNKNNNKIQQNIFASSSHSVSNRISYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNTSKSYSQLNMLGKDGKCKTFDADADGYVRSESAGIAILKNLNDAIKDGNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGGVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSNNPLLIGSFKPNIGHSECASGISSLIKCCLILKNQCFVPNINYNKPNPNIKFNQWNLKVVTDPIDFSTLKLSNKPISIAINNFGVTGSNCCLIVSSFKGNQTNNNNNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVAIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNATMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLSEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKQDGVFCTILGSPTSFHTSSQIPVKDEILKISFKSKQSTYPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEIIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSNLNENDNIQTSLSLPLYQWEEQEYWKLDSLYQHHLSNGPSINHLGISNSNHTPYIKSYQTHIDIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGDNSESTTNPNKELPDILISFIEFKTPLIFMDGVNQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGQGLNEDDEESLFKYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVEKCYFGNNCSLSELSLSQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEGLTYYSSKVPTTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDSLAMEYPTNEIYSCYLQSKDSLIPSLSSFDHIFKRKITDEYVDQIKIYESFIPKLLFSNINKRCPEITIAEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRVNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIVGDGIFGVFDQWWSFQDTEIRKDRCCMNQQTWYKLLKSVNFNDDIKMTPELTCFVIQAQKPSISNLSFSKSETTNYNNIIVFGNKDDSNLSNNFIKSIDNGNLQFISTIEEFNKMTKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNSKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITNIGSGNKEFKVGDSVYGTGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITEYSIENVKDSIEFINERVHMGKIVVDHENQDSIINELIEKQKSIDKFDQSIFKQNYKLEPSLLGKNILITGQSGIVLEILKWILRNSENNSIDNIIILSKSSIKWEMELLINKTKLLNSNSINSMGNYLNKIKFHFKSVDISDSGLTDKGIHELLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKIINFIMSSSITSKTSSANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIQSTGFVSRNESVAALLSGEGLLPISTNLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISELLSTDILKLNKDIILVDYGVDSLVIIQLKNWVDKEFSIPNALTIQQVQNSTINSFIQLVKNSIDKKNKK", "length": 2552 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EN3-1", "protein_name": "Alkyl transferase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNCSNNSENCNINDNKKKEENVKNQNSNKNSNNNNNKSNIESIILNKKSKFSSEKELDEKENKDLKDLSNNKPINIDEYEGLPRFENEQNARSKSSLWSKLCDWMYDQNFKIASSTLKNGPIPKHIGVIMDGNRRFAERNHLETKEGHKKGFNTMLDLCQWGLTLGVKIISVYAFSIENFKRSKSEVQDLMELANNKFTEMISKSHKLQQLGVRIRVVGDHSHIPEKTKSILAKAVKSTENNTKALLNICLSYTSHEEILHSMKILSKGVNQEKKIEIEDIDQDLFENCLYIKEDLDILIRTSGEYRLSDFMLWQSCFTNLALVNTLWPDFSFFHFIYIIFLYQFNSKTLKNEIQNQYKFNNNNNNNTDNNNNLKENIKNLKSDQRVKEFINHLKISEEKLFDEFISKYNEEEEEEEEI", "length": 420 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54F52-1", "protein_name": "Saposin B domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLIFIVCLLLIFNYFIGISFGNKQINSNQQQQIINTDKNYNHNKNNKIIVSHNKNNNNNNNYNEIETENLGCTFCKYLTEKVEEYLQANSTEKEIISYLDEECELLNSPNLVLTCQNLVQQYTPIVIELIDNNESPSVICENVNICPTSSSSSSSSSIEEEIIKKLNIDDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEEEEVNTCEICNLVSNLIEKYIKINNEVDEIRELIENECELLSNSKVSSCYSLVDQYFEHFYVTIENNYSANEICQLFQFCPIESSSSSSSSDIINNIPLQDSGCTVCTVLANYAYKVQANESIPEIIGSMDEICNKIGAWRDICNSIMRSGGQQLVEDIVNKGEGVYTACSNIGYCQSSSSATGTSGFSSGGSGTSTGGGYSTGDFYYKPLK", "length": 416 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54GT5-1", "protein_name": "Endoplasmic reticulum junction formation protein lunapark", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLFSKKNGFEKQLLDMETKILNLEDKLSNSRIFHQKVLHKIVLYSFAIEFFIILFTYVKSRSLESIPEKLFCCIYLVLFPIFILILTKVYGFVYKYLIKKNEVRLDSLKTGLQKKLDERKRETDYENTQKLLDRYEKNPPSPTNKPLGPPNLNNNNNNNNNNNNNNNNNNNNNNNNTLGNSMRNRNQPFNISSQQNQQQQRMIQPQQLSPQQLQLLQQQQRLSQQIVPSQQQQSQSQPQQQQPILNQPYNINNNNNNNKPPPPIQLPPQQSSQYIGNQQRLPPQQYQNEQKSKWWLDKLVDYLISDGPTHGSPLICSNCHSHNGYVPVEELSNIQFRCRVCKTFNQRDSVNNSTTNDDRNNSQNTGSNQQQSQSLQDQQPSIEEIDKNFSVTEQKNETNNENYSDSEKQLEENNNNNNIDNDSGSSSSQNTPNKKKGKGKGKGTPTKKTN", "length": 452 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H60-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLDFFHLKDVDEFFRLLEKKNLQNLDNQIDGPGNLNWRTTYTEKDFSKVPKFRGIIHIVQIRDLGTKIHRDLLYEIMFEKLLDIARLNNESKLLKNEIQDLKTKLDEYHNNNSTTNTDLIINSFINVIDTTTTTTTTKTTMGATSIDKKQSEGDSIDKSIELDFFKIKSDQSQQSSPSHKLEEKQNQVNNITNEIPQESIKTVKQQTQTETNQQTFSSTSPSHQNEEKQDKQEEVKQEEVKQKEGIQKEDKKEEDKKEEGKQKYGEIFIIEIPQEEEKQKEEGKQQDGENFIIEIPQEEDKQKEDKKEEDKKEDKQEEDKQKEEKLEDKQKNGEEFIIEIPQNETLEIKVDTHPRSSNDDVSTAEMEVEALKTPLFAETTFVTKQQVITNKKLLVYKQSDFFPNMTTLLQSRLKDVTVQEVKDLTKIGLNDNSYSVGDFENVFVLYAVSCMGARTDSERDAFKIKSIRSIIGDKVPIIYGVFMIGKNGPTRIKVEHTQTSISITHSMSDIGRNLQNNENLKQLQSFLQQ", "length": 529 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H72-1", "protein_name": "Tudor domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNIDFEDYEFYDDSDFEINTVDESVMTYSSVFDFLRFGKIPKFDTQTKMKHFKDNISKYRIESKDILHTNVDSKILRRLSEIPRVEKIFPDPNTLQLEVFKPNHELRNSNGELLSKHRPLQETLKLIEKQYYWECKFIHTSMEVDITKLYSFCDLCSQSSVSRDMDIDSNDEDKILEQMDIVEKSFSNDRNNNNNNDDNNKSIDEKDKMNICGIGIDLEAIKEGKLFEDELAEALGFPEYNSSVDNSFNSSVNNSNLNNSSLNNSLNNSKNNNNNDDDNNNNNNNNNDDNNNNNNNNNNNNNIISNIDNNNNNNNNNNNISNIDNSNNNNNNNNNNNNPVNDDFSFIIPKDYQSKNHLNDNENKDDEKDDDKDDDKDDDKDDKDDDKDDDKDDDKDDSKDNGYIKTNVSLSSSSSSDNERDDGDSHSDKSVDNDENNNNNINNIISDCNNNNNNNNNNNKINGRTFTSRRTRSDSNTSNSSVGSYISNSSKSSANSYDFSSSDQDYKSPNSPTVKKTRGASLVNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNSILKPKLKSKRASASTAINSFISQFITPKHPPKSSSRLKRANRSNDSSDSGDSSSNNSSRSSSDSSDNENNNSYYLPIQSRRSTSKQILKDHLKSPTKKPRRIIEEDFYHVEEKKSPTSKISTPISRSASYNFGRSSPGSSPGSSPSLSPYSSPPQSPPHVYNHNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNYNNNNNNNNNIRSILKSPQSPSISPIKTPRRSPQQQQQLQLQLQNYIPMPTKTKTPTKAPYVPNYALAPIEPKPTQKTPVHVFGGNQLSVKKRQTIEDMITEVLKMNVDTAALKLPLPKVGQHVEGKSNMEDYKDAWFKGVVKEVLPNDFFLISYIDGGEEELSYTRLKPNLTSELEPLKLEEIVVGGEYLGSYRNFYYNVYVLEILRHSIRVYFADLEMAKTIKYSQLYLLSSFVKR", "length": 998 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54HE0-1", "protein_name": "Conserved oligomeric Golgi complex subunit 5", "gene_name": "cog5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNNNNNNEGVSSSSSSSSSPLPNISSPNLISNSNIENDIEIKKKSNNNNNNIFEGDNSHIYNQFLGEDFNVVHYTSNALKVSSISLSLNTLTSCTRELGQELTENITTNYDDLFKLANNIKELDQLTDTLKLGVSNLEESIQRMKNDISEPYNKVKSHIGQLKRVQDSCELLRKLIRYIQLVKKLKNHLQAGSRDLSKSAQCINEINLLKKDSDLTGINIIDSQVVWIKTCSDQIITISSTLLYQGMENQNQTDVANSLQVFHNMTILNEKVYSIVNLTTEKVIKNIKALLNVNKLIADLPKTTITNNINNNNSNNNITTNNNNNNYNNNNNNNNNNNIISTSTDKSIWLKFESLIDTLYSSLIQILHLQRVLLKIKDPLTHKSLMEVLLIKQHQLQQQQQQQQQQQQQQQQQQQQQQQQQQQVGTTSNNTQPILIEMISTLFWKSILKVLENNLLVAAKSSNIIENTFIREYPKVSKFFLDFIKKLQNYIDIHQMDIQQQFMIVLSNINQIIGNNNSNNSNSNSNNSIESSLSTSSSSSSSSSSSSSTTTTATTSLILLSADDYKLSLFKSIGLFEKAYLEYSQSKMSTIVNGLFPQSTWSSRSTLPVIPNGKQLVDLSKTIWSEIEWLVGNNDRQLLGKLMLVVSKVIDLFSSKIESMVQPPGLIVLNSNIGSSSSTGGVNNNSNSNNNNEIITINENSKPTPSQTVNTLLFNVSIQLNSSIQSLLTSQPLERESIIVIEKSLNSLITICTNIITPLMNSFFTHIEQIFSTIHNEDWYNEKTTKMLINKSNQTCSSYMESFKTLVNYFQNQYLMRFTPCQLLNNQIKSMISKIFIVYLKYCSLLKQPFSENGKLKMVNDLTHLEFAVTPLLVSGGIKEIGESYNLIRNYKQSIFN", "length": 898 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54IX3-1", "protein_name": "Probable polyketide synthase 26", "gene_name": "pks26", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METNNNKNIQEDIAIIGFRIPGCQDNTPSELWNNLMNKFSGVGKTTERWSDNYHLSGDINNGNSGLLPLKEWKKFDPAFFGINPTMVSTIDPQQRILLKCTWEALEDAGIDPIKLRGSNTSIFIGCSTGDYLDMVKSNNEIQTNLFGSVNHSLSNRISYCFDFHGASMTIDSACSSSLNTVLLGCQSINQGKSNLCIAGGVNFILDTTIPTAFSFLNILSKNGKCMTYDEGADGFVRGEGAGLVVLKSLKDAIKDGNNIYCIIKGGNTNVDGNGNADKANFFQPSKQSQSDNIKLALESIKKKSMLDIDIDYVETHGTGTPTGDPIEVEGISKVFKENHSPENPLLIGSLKSNIGHMEAASGVTSLIKCCLMFKNKSFAPNVNFQKINPKIKLDEWNIKVVTEAIPFKKNKITSMVVNSFGVTGSNCCLVLTESINNNNNSNVDKITKNEKEYLIPFSANSNQSLKNYIEEVSKIDESLQFEDFVYKQLSNKSTSLFQRFVVTSKDWKELKYKLSQPLPLKEISSSISVKKPNPITVFVFCGQGSQFNKMGLELYNNDKNFRNYIDRFDKKLLEYYGYSVISKLRSIDDNDLITIHDPIIAQPATAILQISLFELYKHWGINPSFIVGHSLGELPMAFCSGMIDFDTVCYLLYHRSLAQSKTNGCGKMLSCNISSEEFVKNYSPRYPFLEIACYNSPNSIVVAGKESILLELSKEFKNSGIFCAMLGSLSSFHTSSQLEVKDHIYSLKFESKEPVIPTFSTVTTHLFNSNKLYDNDYIFQNIMKPVLFNETISNLYKHVENNQLGSEMIFIELAPHQTLSFYLKQLIPKDSNYFSNSNSITILSPLHKKKNDYLEIQQTISTCYCKGYDVNFKSQILIESKTNISNKSLPLYQWDDKEFWKDLEKQKRILQGPPMDTLGFSNEKSPILKSFETKIDIKKKPFQYLKGHIVKGKIYFPGVGYIENLLKMYPSQDIDIDSMEFEAPLILIEGIVTCLQSNVYKIGKNEFKVQFHFQDQKTKQWIQSSFANYHLSHRDDFDPTTNKLNIQNLISNNCNLTKLSKNQFYNFIKAKAGLSYNGEFQGVEKCYLGDNCSLVEIPFDTSNQDVETNINMIPILDSCLHGVHILYVEQCQMVLEKIEGLKYYSSTLILSKQKEQQKLYVFTRIENKDLINNSISASIIVMISDGTVFFEIESVSLKSLIPLKDPISIENPTDELFSSYLQSIDSLISEPSSYKSIYKRNEFISSGMSDLSRSDYQQFISTLLYTNLIKRNQSIESDLRNQIEFEEIKAKYCKNSKFERLFTFVIETIKQYDGINGNLNSWNEGNIDIYKILIKSTRIISKLLFPLQGEDTTIDTPQSLFENNLLDDFYNINGNTVIQNQLVGEIITQSIKPLINEKMVFRILEFGGGVGSLSIVTLNKINQLLEQHPNFQIDIEYTWTDISPSFIPDAKKLLSNIKGVTIIYRSLDLEESLIEKQLLKPSYYDFVIMSNVLHVIKEIKFGIDEIYKVLSPNGQLLFIETPYRMLICDSIFGVFDQWWGFTDTGIRVDRCCMKQKTWFKLLSESNYQDIIMSDDIKDCCFVIQAKKPSISSLEYKLKIDSQENDKIIVFGENDTFMKYLENKSTKQIIKIKTCQQFSDLITSNSKEINNQSIIYFIKTLNQLLIENFKEITLEYIQINQLLLSSGLSCKHILLLNQSTSENYLGSSISGAARYFDEFPPLKLYSFDFDKYSLNNESINIIDDIIEPIIKSMNNSNIRKELLVRNNKIFFERYKQEKRIKENYKSTSFENDKSLFVHLNANLEYELKSKQVKLKQNEIEVNVKATGINYKDYLVYTAMTPSELINHKGESNPEFGHDFSGIITRIGDDDGDNDNEFKVGDQVYGIWFNTTASHIIVDKEFLCHKPSKLSHTIASSIPVVYITSLYSLYNIGNIQNDESILIHSASGGIGLSALNILKWKNHKSHIFVTVGSKEKEKYIHDTYGDFITGIYSSRNKDYLKLIKRKLTELGSNKKGVDIILNTLSSSEHMVSNFKCLNHRGRIIDLSITHLNHNEYTCNNNFKYNYGYHNVEVLFVKGDIISKLLKNITSAIENGSLSTGIPIIEFNDSDCFNAIEFINKRQHIGKIVVNHNKENLIQELIKKTNLPIIKSNYQINSDHLGKNILVTGQSGIILEILKWIVKYSTNVENIIILSRSSLKWELELLVNKNKNKLNFIYKSVDVGNSLEIEKVIDEILMENPQINNVDSIFHYAFTQISCKEHEIDQVHLNVSHQAKTMGAINLHNQSIKRNWKLINFIMASSAAGLIGSTDQCSYVCSSNVLDTFSKYRKHVLGLPSICINYGLIESTGFVSRNQSVAVMLDGQGIRPMQTNQILGSLDLFIQNPSKSTNIILTSFNFNEFATGNLQQSNVHKFDFQFNCCLSQKSKLMANNQASENPVKDLLINNICELLSIDESKLNIDIRLIDYGSDSLTIVQIKNLIDKNLLIPNLISIQMLQNNSISDNIKILTDSYNKKKQNEQNELKNIKVGSFTKK", "length": 2531 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K45-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKILYLIIYLTLTIVKGAPLYNCKKLNCSSMNTNCKVFGCSPMFGCFETSKCPQSNVDICHTNHCDENTGSCYQIADTCNDGNNNTIDSCGPYGCVNTPVNPPEPTQSCEQKCNDNNPCTVDFCDFRGDCYHYETRCSDYDACTLDTCGEKGCEYRPMNCDDNNPCTADFCSMLYGCYHEPIECSVKVPCRTDSQCNRNNFCETYSCDLSSNICDYYTRDCGGNPCINNECRTGTITN", "length": 239 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K50-1", "protein_name": "Phospholipase D Y", "gene_name": "pldY", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIINRLFIIIVLFFVNVNSKIISESTLNSCQGGTIQIAESIPLGLDISTNLSTHDAWMDLITNAQESIDLGFFYFTLLGGSDLDPVYGGQLGIDIFNAIVEAHSRGINVRIVQNEPSESFPDTETQTLAKLGIQVRSIDWVSLVGSGVLHTKLIIIDESSAYVGSANADWSSLAQVKELGIVLKNCPTMVADTEIAFQQYWNAADFTSLPINDWGSNYQALFNNTNMASLSLNNNNNNNNKNKNNDNDGSGTNQMYEMFLAVSPPQFQSTYRTGDIDALMDAINNADQSICITVMDYTPTTLYNDPNTYWPLIDNALRAAAFNRNVQVRMLISHWNYTSPIIPQWLHSLNQVDNIQVRWFVVPDFSTNPQIPYTRVNHAKFMVTEKQSYVGTSNWSQDYFTVTGGLSYNVFNNDFTNQLQSIFNRDWNSPYTQPIQNF", "length": 438 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K65-1", "protein_name": "Band 7 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSIKKLSTTAIKFTKQTQRFNKRGFFKILNQYERGVVFNFGKFHTVKEAGFHIVIPFIQKCDIVDIRTFTYTLDKQKIISKDNINLTVDALVVFRIHDPKLAVTKANDCILLVNEMAQIKVCEILSHNTLDQVLHNRDKISNQIHDELKEALNKYGVTIEYLKLKDIHFDETIAKAIAKKVEAANLRDIKN", "length": 192 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KF5-1", "protein_name": "Protein LEG1 homolog", "gene_name": "leg1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSNKTIFLILLFLINFNSIYSFNFKKEIKISNDKINLPTYNPWIFQDRFNLYSILINSTNIPVFGEDNSNNCLHGLQLQFEWQNRSGRLEINQGHVNTKSWWGDMNYYLSIIPYLSAMKMGLVPVVEIVSINDQRFCSTYEDCDQEVLNNWDNFFQQIINIRNNGSEGDDQQLLKFMWTAHIGSIDKATKLFTDSLLLLPKNELRFGNGWAHFVDVIATVNFNTNYSTVYHLGQQLPPIMLNSNDTHPSSIESFTKEQRNVVLTMYEINDLSSNNLVWNSFMYLLKKMTKNEICRNLINNEINIFLNSPVPTIIEILFDILTNNC", "length": 326 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KK9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTEVPNQKHNDGGVGVTVGNFVKDNETNVNNNNNINGKGENDNNNNNNNNTIIDEPKLLNNNNNNILVIPLTTNIIDNELNQQKQHTLPLPLPPPPLPTQPQQITPPLPTQTQLPNNMLPSPRPIQQPKIRQQTQQQQAQMQQLQLQIQQEIQLQLQQQQQQQLQLQQKQNESEINGLFSPNFSSSSSSSLSTTPNMHSPLFNNNNNNNTTTTTTTTTTTTNSSTNNTNSSTQTKNASTNKISQDVIGVFDDTDTESEGEEYHSGRSIDFWNKDYKDIAWRCNWIDLQIRDLQYQSMVCDQLYHKVRRSKQKIIPDNKSLSSSIDNNNNNNLKSIPIETIDHSNNAITSSNIPYSNNEEEQQEQQQHPSQSIRTTSVVKLRKPRKLIRRPTVKLSAKQMTTDLEAHPLFTFHKGYFKFENAIKTNIINEMEIKYQEKEKPPKLLTLSEERLKQYINSNEDVDVVNLFATNESKRLSEKRRGRIPSDKKEKVSSHRLKSGDEIDGTSSSTATATTATTTTTTTTTTTTTNKKSRRSRREKKKEKEREKQEKEKHIKTKDEQKDREKKEKAREKELEKERKREKERIKEKERQEKERLKKEKELEKNKKKEKKLLKEKEKEIKEKKVKLKNQENIIEKDLTINNTTTKTTKSKKSSSKVKKSEQEGVKLENVEIEDEEVEEEEEEEEEVEDEEEEEEEEEEEEEEEEEEIEEVEDNEEEKRKEERRRRRRKRRILRRRKKLRRKQRKRQLFLQKQQQQQLLQQQQQQQQQKLLQQLKKRDESNGLSYKEIITPEWRDISSFANNDPSLPSPLLLSNPLLAQDIKNITTTTTTITTSEPISKFSTITEEELLIRQTTNGIDGTPMNGIGEDSESSGSEIELDEDAMKIIHARNEIEEKRRFFNTIKQIQMENPVPSYKRKKESLPVEFVAPTVEELLPSYHFNKKSIKLLGKSWNGDFEYYSSSDEDDYDDSDDYDSDDDNDDEDDDDSDSDDEDESDSDDYDSEYDSDLSDSDDSESESSDNELDGLYSSESEINHNSSGDEDEMDVELNNHHIPSKNSKNSKKQPVNNNVNNSNNLNGSSGGGKINSKPSKQQPRNSKANPPSKQQPTPLKQQPTPLKQQPTPLKQTTTPSKATPSPKQQSQQQQQQQQQQQQQPQQPQQPQQQQQQSPKPTPPLVSTTPPLSSVPLSPPTKTIRSTRGVSSLSNSTSSLPKQTNTPPISILSRKRNQSQSSVTDAPLSPTTTATTTTSPKPTTRRKGKLQETIPVEETKIIEETKPFEETVPIKENSTTTPLKRTRRQTKQQLVNGETTTPLTNGDNHVEKTDSNSTDVKVDPTSWWGDKQYKIQPVMEATVIRFKRVKNDDGDDDDQIQNNQKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNINNTEDLESKIKETKSINIPMEISTNGNDFQMKEKEGE", "length": 1472 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU3-1", "protein_name": "Probable polyketide synthase 25", "gene_name": "pks25", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDNSYLNNPQFDINNGNKEVTDDDNNKNNQDNLVAIVGVGFRLPSGENERNNTPQALWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGITPNEAQTIDPHQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGSSTNDYLTLNRNEVKSNVFGSMAHSIANRVSYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDPYPYKAFSILNMLSKSNGRCKSFDASADGFVRGECIGVVILKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPNGDPVETEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNENKNTSMIINNFGVTGSNCCLVLSQFNNTNKQKQQMKTKINNYLIPFSANSVESLKKYQSLIINSKENELKYSFEEFVKNQVFIKPTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKRSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGLGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGAGYIDNLLKLYPNQDLTINSIEFKTPLILSDDNGQFLQTNVYQTGKSDYRAQFHFKDNRTNVWVQTCTANFQLYNNGKVDKLNLEEIKSTKCNLSSIPWDKFYPHIKNRTGLNYKDKFQNTIECYLGDNCSLTEISLELPENFHDQESFFNTPILDICFHGSIVLIKDNCKLVLDKIDGFKLYTSNIPKNRFDHLSIFVYTTMKSTKSNSYNSTYTVMLEDGTVILEVENLICTSLTPVKDPLLIEIPTDMYYTPYLQSKDSQIQSPLEFKSIYQNNQDNDSLLIPNVVLETIKPLINEQMEFRILEFGGNNLSNSTLLLNSINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIKYSLNQIYQILTPNGNLIINEQQPNNENNENNEDSLKNLLVNCNFNSDIMMKSSSVSDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCNQDEQFQQQQQLINKFESHYNNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSITFEYVQINQKLYEFKSKCTHVLITYDSQSSNYLSSSILGAARYFDEIPTLQLFTFDFDKDSLINLDISVIDHLIDPKQNTLIEFFIKKNGKVYFERFKKGLKKNSFKSESYHQITNEQEILISKLDENLDYQLKSKDSILKPYDIEVEIKATGLNYKDYLVYSGLIKLKGDSVDFGLDFSGRVSRVGIKSSKEFKVGDEVYGIGQSTSSSHIIIDSMHACHKPSKITHVQAASIPAVYATSIHSLYNIGNLREGESILIHSGSGGVGLSALEILKSNNHSSPIFVTVGSEEKKQYLINTYGNLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDSNFKCLNPEGRIVDLTITHLNPNEFIDNNKFKYNFGYHNIELYYCEKPTIKKLLQSISKSIENNTLNYLIPITEFSNSNIKKAIEYINERKHVGKIVISHDTDITNKLIENQPKIDYSLLKSNYKIKNLGKNVLVTGQTGLILDIINWIMKYNSTVENIIILSKSSMKWEMEFLINNNKTKIKFYYKRCDIGGDSDSINKTFDKLFTENPTITNIDSIFHFAVVQITRKVKDIDMKSLNISHDAKTIGAINLHNQSIKRDWKLSNFILASSILSKVGSLDQCGYVSACCVLDSFSKYRLSIGLPALSINIGAMGGSGMVARSELVETVLNGQGYNLTSTNQLLGTIDLLIQNPGQESNNLMVGNFNFPVFNNFKQKIHQKFDFIFNALDSNSENGDGSNIKNSTNIKDKFLNKVSEFLSIDSSKINNDIKLMNYGADSLITVQLKNWVDKEWSPNLITIHQIQSNSIGMVCQIINDNFEKKK", "length": 2380 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU5-1", "protein_name": "Probable polyketide synthase 24", "gene_name": "pks24", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQNKINKAEILQVDDKHVEENLVAIVGVGFRLPSGSIENERNNTPQTLWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGINPNEAPTIDPIQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGCTESDYHNINKNEVKSNVFSSLNHAISNRISYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDSYFFKAYSSLNILSKSNGRCKSFDASADGYVRSECIGVVVLKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPTGDPIEVEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNKFKNTSMVVNNFGATGSNCCLVLSQFNYNTINNNINNHNNNHNHNHNHNNIKINNYLIPFSANSVESLKKYQSLIIENKEYESQYSFEEFVKNQIYNKSTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKCSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGSGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGTGYIDNIFKLYPNQDLTINSIEFKVPFVLTDGIGQCLQTNVYQTGKSEYRAQFHLKDEMNNQWINTSNSNFHLNSNDNYHEEKQKLDIQDIKQTKCNLSSIPWDEFYSLMKTQLGANFYGIFSKVVECYIGDNCSLTEISLELPENFHDEQSFFNCPLIDACFHGTVILYIQKNCKIVTDKVEGLRYYASNIPKNRDEHSSIFIYSTLKSSPSDDLLSSSIVVMLEDGTVIIEVDNLVVKSLTPVKDPLLIETPSDFIYTPYLQSKDSQIQSPLEFKSIYQNNQVDDGLLIPNVVIETIKPLINRKMEFRILEFGGNNLSKSTLLLNEINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIEYSLNQIYQILTPNGYLIINEQQQQQQQQQQQQQQQQQQQQQLLNNENNKESLKNLLVNCNFNSDIMIKSSSISDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCYQDEQLQQQQLINKFENHYNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSVTFEYVQINQKLYELKSKCTHVLITCDSQSSNYLSSSVLGAARYFDEIPTLQLFTLDFDKDSLTNDLDLFKTIDYLINPKNNIQREFYIKNSGTVYFEMYKKELKNLKNSYKSESYHDLSKQQDQLVSKLDEHFEYQLNSKQIDLEPYEIEVKVKATGINYKDYLKYNEMIKVNEAGIGFDFSGVVSRVGIKSSKEFKVGDQVYGIAYETSSSHIIIDSLLACHKPSKITHVQAASIPAVYSTSLYCLYDVGNLRDEESVLIHSGSGGVGLSGLEILKSNNHSSPIFVTVGSEEKKQYLINTYGDLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDTNFKCLNPKGRIVDLTTTHLNPNEFIDNSRYRYNIGYNSIEILKVGKSTIKKLLQSISKSIENETLNALIPITEFSNSNIKKSIESIKERKHVGKIVISHDTDIIDKLIEKESMIDYSILKSDYKIKNLGKNVLVTGQTGLILEVLKWITKYNSTVENIIILSKSSLKWELEFLMNYNNNNNNNNNNNKIKYHFKKCDISNWNLINKTIDQVLKDNPTITNIDSIFHFAALQINKKLKDIDMNSLNVSHSAKTFGAVNLHNLSIKRDWKIINFILASSVVSVLGSFDQCSYVSACCVVDSLSQYRKSIGLPSFTINIGGVSDRGYLSRHKLVEAVLGGQGVELISPNQLLGTLDLQIQNPNMPTNAFVNNFNWPLFKSFKQKLHQKFDFILNPINVDNSISMENDTNQSSSSTNVKNKFLNKVSELLSIDPSKINTNIKMINYGADSLITVQLKNWVDKEWSPHLITIQQIQSNSIGMVYQIINDSLDKKKKEMDEKLLPITAKTTTTTKNDPNDKTEYKYIAGGDCCREFSIKFHYSSVVNFII", "length": 2471 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LI2-1", "protein_name": "DNA replication licensing factor MCM2", "gene_name": "mcm2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSQNNNNNNNNNNNNNNNNNNKRKTKTPSSVNHNNTKINEDKDLYNFIDKIRDKTDKSHLEDEYDEDDNTKDGKFNKVEDEIKNDIDSEEDDDDIIEDNEHLYDGDEDSENLSSEGEGDDLLDEDLQDQDEEEVLGDEDNHYEMEGLDNETYEDIDKDKKTEVDSILTKRDREEQKTRQATNRHQYRISSFLLDENDENMVDEDTENNKLLEKRKANLIKKRRETIRQQNDNIKKDYDGSVPSFKDGFVNSERYFEDGDGDDDDDDDDFDIGDNGQVVNLEEPDKDKCLREYVCMSGPRNEISKQFAKFLLEFKEKDGFNPIYQESIQKMCAANKESLMINFTHLCASTVFGVWVAEIPTEMIEIFDEVALKVVLRIYPNYRNIVKSIHVRITHLPICESLRDIRQSNLNKLTKVGGVITRRSNVYPQLKHVKYDCVKCKTTLGPFSLDGTFNDSKPPIGLCPQCQSKGPFVMNSEQTVYRDFQKVTLQESPGTVPPGRLPRTKDIILMDDLIDTVRPGEEVEITGIYKHNFDLKLNYSQGFPVFSTIIEANHINKKEDLLSSFILTDEDEREIRKLSKDSNIAQKIIQSIAPSIYGHEDIKTGLALALFGGTPKDVNNKHRIRGDINVLLIGDPGVAKSQFLKYVEKTAHRAVYTTGQGASAVGLTAAVRMDPLTREWTLEGGALVLADRGVCMIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLTARCSVIAAANPKRGKYDSGLNLLQNVELTEPILSRFDIICVVKDTIDSFKDRELARFVVASHINSHPDNQNNPENDYLNRATKQSPISQELLRKYIIYAKRIKPRITDIDKNKISQLYTDLRRESRAGGFAMTVRHVESIVRMAEAHAKMHLRDYVTDFDVNTSIRVMLDSFINAQKNSMYKNLRTKFAPYVIFQKDINQLLTQLLQTLARDFSNYHFARSGDIPDQINIPYDDFDTKARELGISDITSFFRSNEFTSNNQFTLKKDKSTIIYYRNK", "length": 1008 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LX5-1", "protein_name": "U1-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKITESNNNNNNNKKDNNKHWCKYCKIFIQDNISVKNHEEGWRHKNNVTRFVSTQNRDKKYQERDQKEAEREINRIKNTGARSFREKDLSRVLDEKKHQQQPQQQPQQPQQQQRIFNNNSNNNNNNNNNNNNNNNNNNNNNNNSNNNNNYHQPQYPTTTTTTTTTNTTASNKNCDNADSKFKEIQEQQRQLLSNNDYYNYYQDRQQLIYDYYQNEGNQPIPEPPLNTSLYGYTESPLLKSRLDSSTDTLSSSSSSTIISPSHQKKRKQDDTNSPIPAKISKDECVNNENKDKSNEKENELNNNNNNNKSGEGEEGEESDDNDDDEEESGSGSESESESSEVDQSESIIGQWQTVDPIESAFGSTRKDSDDEKDKKDKKNKKDNDENKRDEKDYSDVSDADSEEESVNITKRAMANHKKPITLTNVISPTIPSTSKNFESVLSFNKSGVFSLNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEPPQPTPQITLKFNKPLKQRNTRKTNIEDKQS", "length": 514 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54M95-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLISILFFLFGILFFLKNVESASDVVCSFGYQACGNNCYSPSSGQKCYPGGVVCSFGYEACGNNCYSPSSGQKCNPGGVICSFGYQACGNSCYSPSSGQKCYPGGIICSFGYEACGRSCYSPSSGQKCYPGGVICSFGYQACGNTCYNPSAGQRCFN", "length": 158 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54N59-1", "protein_name": "G domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDLDYAIIVLRHHLESNGRFFEISKDDVKNRVTIKNKLTQEERYIDFGEIQNFIQYDEFEYNLLANGFQENLSILKNSILPLTKAPDSCSSNRGKTIGNSSLLINKVNGLIDDDKDTIYLLLIGITGVGKSTFVNMVVNYIEYSNLKDALENATLEQIYTIASKIEIQDENKTHKFSLGDVEDYKIGSSVTQYSRQYRIKLPDGKTLCLIDAPGVGDPQGTLQDNKHFENILHEISSLKKLNAICILMRPDETRATVLFKYCLNQLLLHLHSSAKDNIFFCFTHTRGTMYKPGPTRAILEDHLKKMKDQSDIEINANEKTFCFDNESFNYLAVKKYNATAGIETNFSEDDEFDFGRSWDRSSKEFKRLLEEISKVQPHDVANTICINNARTMISNLAQPMSTCISNINTNIKLMEQQSEKLRNNSIGDESLLYIPVSVVIAEKLENSLLVCTKNGCSSNTDNPCNIDVVSPKWYSSLYWCDNINKMGTCKKCSNTGVLPCLWFDHQVVTIKETPQLNQLPGTDKKTIGQRTKSEIFNERELLVTKMGERKIQFQEEYDTIKTAIVDFSVFLWHHSLIKFNRYYEDYINMQIKQLENSENSQELIQKLNEHLSEYKASVEEIKHNVQNNKASVKTQKEIFATFDKLLTLPNVGYIIQNQIKLKQSSHYKSEAVEIDLFSKMKNKTKQIIK", "length": 689 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ND5-1", "protein_name": "Multiple inositol polyphosphate phosphatase 1", "gene_name": "mipp1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MMVKIKNIIILFCIFGLLSNVSSLSSSSSSSQSSDNNGNLSPIQDYDLEFLSKHLTTKTPYWILTKNGDSNSQGDGSSGNSNSNSNSNSNSNSNSDSSNEPPEQCKLISIDFIARHGSRMPVLNSIEKLKEMTTSILEYKEQVNQGFNWIFNYSVPYPSDIAGNLILQGQYEHYNISKRLLKKYPLFFEPMKYKPQSYSITSTAISRTGISASAFSYGLLQGTGSLGVDGFQPVFIETASLDQDILLRFFATCNQYVDQLKNGTLINKDEQTKWNQMVFPNISNEISERLGLSDIWLPTSNVISDIFEACAYEISINNISDHWCSLLSKQNILDWEYSQDLSNYWLKSYGHEINYQIATPLLNDILSGFDIYINNNNNGSSSSSSSSSSNNGDNSGSNGSSGSGSSTSTSSNDNGSTNNNDNKVEPTSILRFGHAETIIPFISLLGLYKDEQKLFANSSTEQIENRKFRTSVVSPYASNIAMFLFDCGSAADGFKILVQHNELPVLVPGCDEIYCDYQQFKSIFKQGIDNFKWNSYCNINDDDSGSSGGDSGNGNGNDSHSKKSSYFLAIFIPITFLVGGTIGGIFTYFSYEKIMQVKNRKKLTQYGNDEFISSPKSKSFSFKPTKFDSRSPLIQ", "length": 635 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54NT2-1", "protein_name": "SH3 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKITTQFARTRQMLFTKTGHSEETIDVQYHYEKERTFSTEERLVKIQKNSKKLIELYKDLNKITTDIAQDACDLYDTQDPMWTPGSKLRDVATNNDKHLLDYTEQMAEPYTKPLSDYISQYKEARKRTEELTTRKVDMDRYKNEVGKLREKGAGSSSKAKLAPTEEKLRICKEGYDSLHEELLNDLPRLNEDKLIFIDYLVASLIKYQSEFHKKVSYEWSPLPSLTKHVDEYSGRDHQPVITSVERSAASINLRSDPVFKSNASIKMKPGAQDQQQYSTVDKDIHQSPNPSNLNLQKSTPNPYGGASAPPPLYGGGGSSTATALYDFTGVDSSELSFRAGDIITIHKSEGEWWEGELNGIYGFAPGSYLRMN", "length": 374 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54PW0-1", "protein_name": "Annexin I", "gene_name": "nxnB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEYKEKEINTSSPSSPSKTQISNIENDSISEKAQEPISEKVQDPISEKAQESISEKEHIESNNVSEIIDLIKSGDQHLNNNNNNNNNNNNNNNNNNNEEENQEINYNDNQLSNEEIVEDVKNSNINNNNTIEKGNSSQNNNKNNNNNYHTEKCDYCLICKCYDYGEITHNIVEDSEILKQSIRYSYVDDTSINSILAHRNYAEKEAIMKKFNDKYNKSLETELASHTHQKYRRTLISILTEPSIYDTLNIENSIKTKNSNTLLEILLTRTNEQKELIKRIYLVKYGKNIEHDIIAKFSNGANVNGNMMKQLLISMLNNDRDSNSNQSLDMNLINTDSNRLYQAGEHKKGTDHEVFIEILSKRSFSHLSELDRVYENSNPKGHSLRKAIELEFGVSKSIKQVKISLLDILLFSKEPSKYWAEQFNRALTSGSWGINEIDLTRLTITQQHQASKIKQAYISHYDNSLINEVSSKTSFRYKKIILSMLTV", "length": 487 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QB4-1", "protein_name": "Kinetochore protein Ndc80", "gene_name": "ndc80", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MHNNNLTYQQYQQQQLLIQQQQQQLLYQQQLLQQQQQQQQQQQQQKQYSHGRPSTLGLPSRKPPPMQPQPQPQIQAPIQLTFQQQQQLLQQQQYQFNNNLNTINNNNNNNITNRHSMVTPSTNLGGRSSLGPPSAMLTNNNNNNSNIRNTTFISNSGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNNNNNIHTQVQPKKSIAPSKSNTISSNTTTTTTAASSSSSSNPSITLRQETRPVNDSKFQSQCLLRLQQFLSQSEKGYPRAITKDNLMSEINGLMKFLCLHIDPHFKLPTEKPEEEIISFFKMMGYRSAGFTKRVFSQVGNAHTRGHLLGAIIWMVELIEYDQIIRQMDSHIEREILNGNTIDENGNLTTTTSATNTNEDGNFNLTTQIFSKHVFKSYEAFLKGDDGNHVDQFLEEKFNEVNELIVKECEESMERQKKIKQEIVNLTQYITNDDIDQLNFKLEQTNQEIIATHDLINDNELEDQKLDQEIDQNQTHFQELEIQQKEHQKKKQEFESRIQIQQSNSVDAKRINQETFELKEELDKVQREQSRHDQLKQEKSKEIKQSINEIEKLIQSYKEICCKASLVTNDNLIIEKYRIIFTHTLNNNNNNNNTNNSSILNISNNIINNNNNNNNNNNNNYEEGIISISDLKLVIKNLQELNLEISQNISKIKQDLLKTSNLNDIQKESISDKELELARIKQKHDKQKNILKQEKQDQTFDITQREENIEQLKSSNKKLIDDGVRELEKTIQLLESQREEHSRLKIDLKQSSEQMKLQYLKRIERFISHRQLIGSQIFDTLRQMEELSLTQKILFPPPPPPPQLSQQHQQLMQQQHQNNTIDIDE", "length": 855 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QD2-1", "protein_name": "Probable cytochrome P450 517A1", "gene_name": "cyp517A1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIINVFLFLIILFLVKDFVKKNKKIHTKSPSGPIAFPILGNVVQIRFWELFKIQEHELFGGYSKKYNGVVRAWFGERLFFFVSNYDVVKYFQKDENFHNRPSVLVPGWRYASSNGLGVMSSSDDKWKRAKSSVSQSLRVRTTKKLMEEKAIEFIDSLEKISNNNEIFYPKGHIQGYACSMLFKYMFNQDLSVESGMSRTIGNAVEHVFGNLSKLTAFDCFEIFSPLYDWFFTRRLKGCDIVRQIISSQNENHLKSIDPSKPRDLMDDLLIEYGLNEITKEDTMQINQICFDIFGPAVGTVTITMNWVILQLCNRPELQEIAYQEIKKAVKDDEYVNLNHKQNAPYIVAFIKETMRLCSNGFGLPRTAKNDQICGDFFIPKDAIIFINYLEISQNEEIFKNAKEFNPTRYLDESLPVPNIHFGVGQRACPGRFVAIDKMFLGISNLLLKYKLKTQNGEKIDDSIQFSVSLKAKDYGIKLEKRI", "length": 483 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RM4-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKVILIYFIVIYLINISFSLKPYQQQQQLHNFNIIENNNNNNRNEKVIIAHPKIPPYWLIENEISNPNDLISFKILLKQNNLNKLNYLFEEISDPKSKIYGEFLSINEINELVKSSESDFNVVLEYLKSFNIGNIENGSEIKVFSDYILVETTIEKVSSMFNSKFSNYKNKNNGNTRNRLNGPAYLPKQLLNSIDFVTGLSEFFENNFKIENYLNNNNKNNGDSDSDSGSGSGSGSSNSYNGGLDDILITPKVLKSYYNVPNELIGKFENNSIGVIAFNDYFSMGALELFDEKFNITTTKDNLKIIGNDCLGKGCDQYESDLDIQYIRSMGENISTDFISFNDAQWILDYLHSVLLMEKPPLVQSISYGWAELLQCDVSNGCSTFGYDSKQYVDRTNSEFQKLALLGISVLVSSGDDGAPSMGGSSGNCPIDGTVYCPTGGCNHTKTMCPEFTIYNLNGGSDSGGSSDSYCFFPMGIASSGCTNILGDPSVLDSGMKIFSEKNKQCNLAIEYDRTNLPHVYSECECKDLVNVTFRNYHFTQYQFNENNGALFVAEYPSSSPFVTSVGATQFLSRDEKITTEVGCTILQGAKITTGGGFSSFQSQPKYQQYAISQFFNTSFNSLPPSFSYCPTNRGVPDISMVGHNYKIYSSDGNNKDFNQCPCKSLPVDGTSCSSPTLAGLIGLINDQLLLNGKTQLGFLNPLLYQMAIDEPRIFNDITGDSSNRCSRSYCCLYGWSTSSNTWDPVTGLGSIDFNLFLSYVLKLKGI", "length": 767 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RX1-1", "protein_name": "Translationally-controlled tumor protein homolog 2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLYKDLIGNSHDDLLTDRYEIKVGDVTFEVKTKMITKDLNVVVNNNSLGGSISTTVDNNNSITLSTNLEDEFENVEAAGTFQINNLVEQLRLVETSFDKKSYLAYMKLYIKDLINHIKQQPSNSDNEKIEHIQKGIQSFVKTMMDGENFKKYSFFTGSSMDANGLVALMYYKDDDPTTPTFVFIKYGLLQVDV", "length": 194 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S19-1", "protein_name": "PHD zinc finger-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKNCIVCSKVGQYPLNLVKCYECKSYYHKFCLQSTKIPRGEWYCSSCEIERKNKKNKKRKLDGAGKKNKKNNKDDDDDNDDDDDEGENDEDDEDHQDEDSGEEEDEEEDEEEEDDDDEEEEEGNEKNKIKKRKRIPINQSPSIKKRTKDIDSEEEEEEEEEEEENDSEEERRIQKRKNKIKQQQQLKMKEKKQREKLRKRRRRTRSSRKDDNDQDDDDDDDDNNSNNSDDNDQDENKNKQKRKRRKDKKKDDDDDDDQEEEEEEEEEIVTGKRKRRSLNKVQPNQHLNNENEEDNEEEEEEEEEEEEEEETDSSEEFLENLVCSSCNTGKDEDKILLCDTDNCSRGYHMYCLRYPITSVPKGDWICDFCRFGDISADLHSADDDEDGAINSQKEIEKQKQKQKEKEKEREREREREKEKEKERERERERREKEKKDALRSSFSNIPIPKINNINGSNGSNSNNNNNSNNNGSGVNRQSPPKVISKKSPQQSPKPLKSPTSSSSSTTSSPPPLHQQSKVTSKISPNSQQSIPTINSNINKSPPSQSKNSPPLKPLTPDLKKQIPITNITTSSTTTTATTTTTTTTTANTSNVATTTTLLKPSSQKKPTILSDKKQLNTSGTNLPMNGKKKEDLESSASHSILDMIPPNNKLFNNSIQSAPISWDLSGSQHKLSTSSSSLPNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIKLQQQLQQQQQQLHQQLQQQQLQQQQQQLHQQLQQQKLKQKQIEEEQEKEREQKRLENEQKLLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEFIDQKELEDKLLSQFDNQNLKSPLSLTSTTSSTLSHLPQSTFESSTILSNKTIKQKWKSRILFETDQICQCEIIQIYGMDFKVNPFQNNITSKTLELSFNQVSFDNLPKPIRDEFITKSSTPSTCLDIGAIDLPNSALLIFLPEIPNQSSLYHLIIHFIENRVAGFIDLSNDLSLYIYPYQTSIISLDLIGILIDKKSLSPPSLILNQQQKQQKQQQQEQEQQNQSFDIKNICYIGINHISMNKILTSQGKNYFSFSNFNELTLSSDIKNFDLVVVDNKMVNNQTINKEINNLMQLQPTTNNNNNNNDINNNHDTLLLVIKDVEFSKWLVSQKKFPNSLEIQKIFQQQILFKQSRCIFLLDNSIIIENESSYFVEFISSFGKFKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNDWTIKISSTIFDELLPFGHQSNVKKKIDEIKRGINQQLIVSYDFSPMVPKQSSDFLLLALRIAHSKKYKQVFLITSNKIIQNQSKRYSNLNLNCLSLEGGIDYIKNINNKFSLKI", "length": 1361 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S56-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDLFSHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVGECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54SW0-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "NQAKSSTIQQPTQTQQSNINNNTAKPRAAPPLKLVITNSNPSLKQKPQSQQTIPQQSVPQQSIPQQTIQQSVPQQQPNQSQQVNVNRTINPQQQQQQQQQQQQQQQQQNINRTAPLPQQSNYKPQPGVIYQQQQQTQYRVGTPLTINRSPMVGMVSKQPMSSSQQQSQSQQNIQRVPCQGKCCAGLAVKPLVPINSITAKPPPYSTMGPRGPISGGFVRTSPTGAIIGPSPQQQTMSRAMVNSMPIQPQIQIKPKPSPLNNGGIPITTTTTTTTNPLNKSSPSTLTQSSNTLASSNNNITTSNSLSSSTSSLPTTSTTPTTKPKSKPRSKSNSNSQTSSSTTSSSSTPSTPTTNSTKNKENTTPNKGDDSGTDNEKSSLSNSSKLLPTAYTMDQVLPFNPNQMFLGPEDKYIKSATRTYHKIPTNPSVMSNNRGAEIPSSLEYILDIPIIHDEPSSKNNPTWGRLILDALRRLVANKKTTRITERLKLDNMYKDMDSRSNQDKLDWKNGLVNEAQLNYLLSFLSNTIPFPDTPEKNKNKYLSSSDSQIINSNDQSNSLNSNNSSNNSTTNNNNSSTTTNSTNNIINNNNNNNTSSVPNSTNNSNNSSPEQQDVIDMELKLEPDNSMNFPIEINMDSLGSYIDDSFTFDNSSYDDTATISSDDKNLPITTVMPPTTSTTSTPQTITNTIPTTTPTIISPPTITTTTTTTKTTSPPTITTTTSPPTITTTTSPPTITTTTTTINSITPTTSTSSTINSNTTPMLDIVIDPVISLELLDENHQQQQNKEVKEENVHSKQQPPQQQQQQQQQQQQQQQQQQQQQQQQQQQQEDFMIQVQTSDLETQTQIQQDKEEIQVKPIVDSKKSGNSPTQIQQQQQHQQQQHHHQHNTLTQGFEFGMMMDIMNSPSSTSSMKRKRDDVDQPINQINNSSMVVQQNNDFFSDFNTIEAPFSSSHHSSQLSFQTPFSPDIVIDSDFQNKKRIVS", "length": 981 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54T36-1", "protein_name": "Probable polyketide synthase 19", "gene_name": "pks19", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFGNKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSITMGFQSIQNGTSNLSIVGGASLLLDPYVSKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSTTSTPSKPLLIGSLKSNIGHCEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNINEKPVSMVINNFGVTGSNCCLILSQFIEHSISLNGNNPSYPIESQQQIFLIPFSANSVKSLKNYEDLIINDNNLSTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTSNDKSSNITIKRNQPLIVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLDLKENNIFCAFLGSLSSFHTSSQNSTKNEILPLEIPSRQSTIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDINFKCQFNHNDDDVNSIRNNSTIILPNYQFDEQYYWKVDINFEQYRLNGPNVFNNLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNKDIVINNLEFLAPFVLKENVKHILQTNVYQLGNTDYRVTFNIKDNKANQWVQTCTGNFQLISLKDNNNNNNNNHSSKYNINQLLSECNFTTLSKQEVYKYSKLRSGITHLGTFQGIEEFHFGNDLTIARIQINYENFDINGKPVYQTFDKSFFNIALLDNCIQAITGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLEADSYKSSVLVLLEDGTKLLEIEHISFRSTLPLIDELLLNNPTNELFTNNLQCKDSLVNILSIDNNETSSSSGSSNTVTEIIKQTIKPIINEKIVFRILQSFSDSELSKQIIEALNQIFDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDETIIKPIFNILSSNGLLLLIIEDDIGIRFNINNLIGVGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKHSKYTNEFKKLISNNHTNRKQTTISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGASRYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNEIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISDENKNCEFKVGDNVFGVSHDATASHVITDVLYVSHKPNNISHIEAASLPIIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIEFMHINKRVVSRLLKSISNALNENKVKLIPITTFQIENVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKIVDVGDSIEMRKSINQILLENPNIDNIDSIFHYAFTQVTKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCTYVSANLVLDSLSRYRKSIGLPSTCTNWGTIKSSGFVSRNDSVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKYSNLIVSKFNYDSIKKFASETSTFQRLDFILNSIKEKDNDNNGGENISISESIQMKFLNKISELLSIEQSKINTDIRLGEYGADSLTSVQLKNFIDKENKSNVITLQQLQNNTIGVNIQIILEQIKKLDSNETKGKSKKIIKKDSAPSLEYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKVKVIVGNLASPLLGLSKLDFGFVSNQINLIINSGADINLASNYEESKVVNIGGLIELIKLSTTGDYQKPIVGFSSISVFFESPNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLFREAAKRGIPSMLIRLPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPNIDKNILTSPIGWIGLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSSIKSSFSFLEKQYGCEMVEYEQWKNIINQSKILSCIKFKTFHSLDRLNGVYNLGHGFGVSKKTKELLQSMNSYEGGMVNEKIIQNHINYIFKN", "length": 2778 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TD0-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "V4-7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISKTSLLLLLLSIVALASAISVQRVPIADVTSAPAHFVQNKLAKSYELVQFKILLKQRNLDILEEKFWDVSSPKSENYGKFLSKEEIDSIVAPSPKDVKVVVNWLIDNGLSKNEMIVHSDFIQVRTNVGKASTLFETSFAHYSSSRTALKRIRVVGQASMPMHVLAKVDLVLGLSDFIEDNKMSESMRATKKQVQGSTVSITPAVIKQYYGIPTGQIGVESENFQSIAAFSDFYSSGALQFFDQKFGIDSSTVRVKNVGQNCIAQNCDQMESDLDVQYMTAIGNNITTLFLSSGNGEWIIDWATAIQQYNPIPKIASISYGWAEVEQCEITNSCSTLGIDSVVYVARSNVELQKVGLRGVSVFVSSGDDGAPSFGAASGNCPIDGTKQYCPLGGCNHKSSQCPMITIMESNGTQCFFPMGSESNTCQSMLQNQNIVNGINEFVSSNSKCQVALEQDTQQNYHIYSSCTCDKLKPYSDSDAGFKIVGYSYDQDAGTLFQPDYPASSPFITSVGATQITDVTKPEIVCSVATGAIITGGGGVAITQAQPSYQADAVATYIKSGTLPPSYSYNATNRFYPDLTLVGHAYEIAVPNTLTSNTCPCALESVDGTSCSSPTLAGMISLINDKLIGAGKPTLGFLNPLLYQAAKEQPNVFNDITTGANNCNRAYCCQYGYTATTGYDAASGLGSINFKNFEQYVLSLN", "length": 702 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TX3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLIYAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYFKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKAHTSTLNDMCRHWGVFRVKFYQNHPKINELPDCIRNDNDEPLKLKEIYELMIKDRHPTPRRTEWQKLWAVRYNTAIPKVFININSISHQKGRNTLFRFFSRSLPGINHERDTRCKICGHLFRDPYSHLFTLCQDILDIEKTIISTVNKLSFIKIHRWSMDTLDISKYNRTERIFPNLIGIIAHQLWKIICHKLFNTDESKPEPKFEQKVIETELLNLIETEKFITLKKIKHDEAILKNTNQDLHKYKFNKAWQTPAAPNPLPI", "length": 1097 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54U20-1", "protein_name": "Peptidase S54 rhomboid domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIYGDTREFRNIHFHLNNIRIVGAIFGQDGFIHKKIPLATKVISIICSILFALSLVAPSMFGSYKTCLSIESLTNSFLDNLYRIILSNFAHLSIYHIVYNMITFLDLAKLERLTFGTLKYFYLLFLFGIITNLICLFIYFIGRNNVCHLGFSGVLFALIYIESNSSGRDVFLFNAVKIPSKLYPWAMLILAHVFVPRSSFIGHFSGIVVGILFIKGYLDIFILSNQKLSEIESSQLMNIFTTKNSYFPIIKFGGSRRSYNTDRKSLDGLFFELKNLFNPQQQQQRQQQRQQQQPQSPQPQQPQQPQQQPQQQPQQQPQQHQRDNFRNDNNDNSNNYDEYDFSK", "length": 343 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VC1-1", "protein_name": "ABC transporter C family member 15", "gene_name": "abcC15", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKKIKNIINKIINFFSTIYILCKIYLYYNIKNRYEAYNILSVYGDDDFFNKPCPEDSSNWKDKLTFKWVERIIFVGFFRAPLNLNDISDLPSSLKVENTAPLLKDIIFNDSTIPLIKHIYSKFLPRNYIATGLFVFVSVFSFITPLILKNFLSYVEKIDEQKHIYIGIIQCFLLFLSSFINMASQQYSYWFGFKTSLEVKGALETIIFEKMTKLSNLSKKNYNIGSMLNLMSVDTDFFQYFFCHYYIEIFLFPIQILSLLGFLIYVIGIAGFVGFLVMLITIPLSSFLGTQISKNLSTSMGYADTRISLTGELINGIKFLKQYAWEKMFCERIEEQRKLQLKYLYIRIIYWVLVQIVTQASSGLVLVSTFTTYTLLGYEVSLEIAFTSITILQNLRRPIESLPDCLHKFISLIASAKRIETFLQSSELQNQPFIHNQSGLNDILIRNINFNWNEHNLKLKNNKNNQNNNQNKRSIILSSGEQFEITNDFTFDGIDIQDDNYDYEKEYKINYNNNEEEENFMTDCLLKIKPLIKDRRLQQQQADYQDLLSINLPPPPSENVDFKAPKGLLTIISGGVRSGKTSLASGLLGEICKAVDKSSPDSVNSILSTIQQPFLQSTSFRENILFGKPMNMERYIKVIEACCLAPDLLAMGEGKDLTEIGERGINLSNGLKHRIQLARALYADSDCYILDEILSSVDPEIANYIFQHCIKGMMKGKTVILVTHQIQFISSADHVVVVDNGVLIQGTYLELLRMGIDFEMILKEKENRIEKQIVQLQEDEDYYEEVEILDFTMNNNNNNNNNNNNNNSNFNGNNKLKRSSISLPKGISIESIISKDFDQTTIEKAKLFVQEDRNKGDPGWIIYKKYIRMGSSISFFIFTCIIYLTSQIILLLSDYWLQSWASHDRLNVSEPTDVHYLLIYLAYIGGFVFTLGVRYLLIAKITFGSAETLHRSLLKSIIRAPLTFFEQNPVGRILNRFGKDISDIDILLLDCFSDVLYCGACLVTSIGIIIYISPYIAIPFVILIAINYIFQLFYNYSVLELKRIQSISRSPVYSLLSEVYNGLTTIRSFGQQERFFNMMKDNININLRVFFYNFAVSRWIGIRVEFLSAIVVLMSALFSIFNDNPGLSALGVTTALGITFNLNWFMRQFGELESRINSVERVQSYISIPKEKETNEDEFIQTGFIWPSRGEIEFKNVEIRYRPNSIATLRNFSMKINAQERIGIIGRSGSGKSTIGMSLFRMIECSSGSILIDGDDISQIDLKRLRSSIGIVPQDPFIFSGSIRLNLDPFDQFTDNEIWEALSKVKLKKMVSTMPMKLESLVQGGDGLTIGNKQLLCLCRAILRNSKIVLFDEATNSIDFQTTRLIKQTIEENFKDCTILTIAHNIDTILDSDKIAIIDEGELIEFDTPLNLIKDSTSRFSKLIKLNNNQKNKLN", "length": 1436 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VG9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSIIILSFILSIISFSNGTIVKCTSASCSSLNNNCVNHYCNPRAGCYGIDKCVRIDACHIVSCDLNNGSCINTKANCDDGDPCTDDFCHNGYGCFSLPNNKHPSVICQKNCNDNNPCTDDFCDFTNTCQHTLKNCEDNDFCTIDSCGPNGCVHTNISCDDNDPCTSDFCSIMYGCYHEQIECSIKVPCSTDIECNRYNLCETYTCDLISNICKYSTKFCNGFPCINNECMTGVIYN", "length": 237 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WA9-1", "protein_name": "Short-chain dehydrogenase/reductase family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKKNIFFITGCSGIGFGGLMVKKLLSRGDYVAATSRNKNKLIQDIGSNENDQFLPIEMNLADESNVKEAIEKCIEKFGRIDILISNAAMGILAPLEETTDKDARTLFDINFFGPLNLIRNSLPYLRNNQFLKNNNDNNNSKLNGPRIIIIDSICGYSSLFNGCSIYCSSKFALHAISETMSIELKPFNIHCCNIAPGYFQTSFLSSCLIPDTRIAEYKDTHSFLDEIVKLNGSRFLGDLSKAVDVIIEISLSYSPPNHVLVGSDAFELFDLKYKKLTNDILINKEICSNTDKN", "length": 295 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WC3-1", "protein_name": "Cln5-like protein 2", "gene_name": "cln5lb", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNKLIFIIICLGIVDKTISSDFKSYNDGIYSFTYDNICSFKNSIRDQDVYELYYVQAPLLYATYGNLLEKINAYHSGIVLYNKNNGPNITIDYYAIPSFEATLFPKSIIKDSQGNYNITWDTHGLIEVTNYINETYWNKRQLIMYDLSGIQIKQYLSWAPIYNKTHTFYNLFNIESDLSISNSSKIYKNSSTCDDFVWASFDVLYKLGGTIASVQSDPQRDDIKLFISSGEPKIVDYNDSIKRNQIASFFNELKDFANLGKNKTALEIFNELITFFNGYFYCYIDGEYYEMKLSKQNPISFTYLPSPIPIGKRNFNEIKKLGFCK", "length": 325 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WW7-1", "protein_name": "Probable serine/threonine-protein kinase DDB_G0279405", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGCIFTKPSPEQQKFDGEDYECENKKNLNLISYIRNLLFGNNSHQQLYNEIIPTTTSTTSTTTNSVYQNIGLDGYNNNNNNNNNNNNNNNIMNNYGYDDYGYSYEEDEDYYDEMPIPTIVAQPQPQPQPQPQPQPQPQQPIRIVSQNQQIPTTPPQQISQFNITGNKSPSSIGSRHRSKPKETLRAHKKRHKDGHKMVNEYVFVRKLGKGTFGKVKLAYHHDTHHLYAIKIFNKIRLKKQTMGIGRPNAFDDVLKEIAIMKKMNHINVVKLYEVINDPQEEYIYIVMEYIEGGSIMSANETSEDLARKYFRDIVFGLEYLHEQKVIHKDLKPENLLVNSEGVVKITDFGVSHIFDDDDVVRCSRGSPAFLAPELCRNESQPISGKGVDVWALGVSLYCLIFARTPFISKTNSLLDIYDQIVNHEPTYPREISNDLMDLFKRLLDKNPLTRIQIAEIKSHKWTTISGTWPMNELDHLILSVTDQEMIDAISTDHTIKPSDNTTTDEDDSDLSSSSGGESSGIIGSSNESKSMYNNVNSKQKIQNQNQNQNQNQNQNQNQNQNQNHNQNQNQNQNQNNNNNSLIEKSNISIPASSSSISNNDSCYENRNVYIKDEEMNMICNDSVIMDPIKELNKIDGLNYGCDFQIGKEYSDFQYNSGHFIYDLVDENESQISRESANDYYLPFKTNKYLNNKSIV", "length": 695 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WX7-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MARTDNVQLPLENTSIEFEEEIIDSQNDISQQKNYQDFLKNIPTDLNERKEYISSLKKLIKLEKRNHQQIQGEQPNQQEGLNSDRPPPNHHGDHHHSLPPPNHHGDHHHHSQPPPNHHGDHHHHSPPPPHHHGGHHHCPPPHHGGHHHCPPPPPHHHGGHHHHCPPPPHHHGGHHHHCPPPPPPHHHSHHHHCPPPPPPHHHGGHHHHTPPHPPPHHHGGHHHHCPPSPHHHGGHHHHSPPPPPPHHHGGHHHHCPPPPHDGNEYLPQSQTNIEQCICRLNRKKELLIAKIQSIDSIIYNLECLNKQNYQNNYLPSIQLQPTQQPQQPQQTSIKPQQMCQQFFIPQTPNFPQMNNSAPLMYVSQIPVQQSFNNN", "length": 374 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54Y59-1", "protein_name": "Small GTPase", "gene_name": "rsmH", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNIFLSKSKDVYRVTSHKKEVKICVLGDANVGKTNFINQFTKSSFNEEYTPTIESRQNKLYKFNRKQFQIQIYDTAGSKELNLFVSDSISQCEGFIIVFSLNDRNSILKIQHYKTLIKNIFKDVEMPIVLVGTKMDLKKEITISKNECKITSVNNNIPNLFYTSAKNKESIIPVFKKLVDLIISKEKKVKKETESNNIKINNQNKIKKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHVFKTRSNSTLRMKKYLKLF", "length": 272 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YJ4-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKVYQDEEFSFFEIGGKKIADLYVRDIITEIRKRGKEITGLGLKSKYELLCILVNRMKEENPSLNIPPKKRVLDFGSLSSTTSNGILQDSNKFFKKDNTHQHQQQQQQQQQQQQQQQQQQQQQQQQHSNNSDDDDDTHNYNDDSDESDDEYIITEEEEIELHKNLNLGDDENLLTLEIKLLESQLENKKFRKSLLLKDKKIKHLENIIQQQQQQLLEQQHQQQQQQQQQQQQQQQQQQRQEEEQQKEQQQKEEQEQEQSSLKNNLKFKDGANLFSIESISNLYNKILNEFNFKKIITEFGDSSLKIHEEFVKFIILKSINLNHNNNKNNNKNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNNLPNGDVNKNNNNNGEIIELVPPPKIDEFWKLMVLDTVGYQQFSNILGAKVNYDTDINPTRKGYQRLKDMKNLYFPPPPSTTELTTDEIWPNHYLLPIQPSPQKQHIQKQQLPSSSSSSSSSSSSSSSSQQHQQHQPQHKQQHQLQQIQEQQPQQQQHQQQQHQQPLQQQIQQQQQQQQQHQPQQQHQPQQQQQQQQPQQQQQQQQQQQQQQQQQQQQQQQQKKQQQQHQQQKNKENNKENNKENNKQNNKENNKLNDNNLNIEVHEDEGNRIINFLISPDTPLRNLFVAYAKEIGENFNSFKFYFGNELLCQNETPSQLLMRNGTKIQAFYLNKKEIKK", "length": 702 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YV1-1", "protein_name": "Rho GTPase-activating protein gacII", "gene_name": "gacII", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVRKLFNTSHKKELILDVDTTIVKIGTPKNVVLLTKWLDANGAIKEEGVFRVNGNTTTMEQIKKNFSQGKDDLTKYTSADIHSMAGCLKFILRELPEPIFTWDFYPIFIKIQCLQDESRKLFFLKMLIHGLPYTSRTLVFQLFGFLSKFSVHQDQNKMTPKNLATVFAPNVLRPKKEEDNFQLMNNQDSIGVIETLIEEFQYISNIQKNTLNSQEIKVKSVLPFDETTNAITQQSLVEDYLIAKANTPQESSSFKKNLPFKKGDIIKLLYIKNDGNFIGEINGITGNLSQTYVDIIDISELAEAFTLTPPPIPTLPIASTILHTPPTSSSSSSSSSSSSILLTDNQPKLCSSTPRINNSPSSFSPSLSSTTPQLLVQQSPRQSPRQIPSISLIVEPNNTNQPSFGHGTLQRTSTGYFSSKPLSISQPINMSKPTNMSPPTHHAMSMHNLPPSNTTRENHLPPLPTKPPPLTIPSSSSLPTTPIKQQPQQPIQQPLTPQNHHHHHHHNNLSSSVNTANTGNCANILSPNSDRYLSSRSQSSVHLSGSSSSSSSSSSSSSSSSSSSSSTSNRKFDFSLKSKSSKNSPSKNLPPQPTTTSTLTPPPPPTITTTTTTTTTTTTTTIATTPPPPSKPLPNIPVKDQQFNTLKRSTIEIPPPTITSTNINNNNNTINPRTLNYSFSSFSITYNNSQLGGQLSQEEPPGGVKSQSSYLDNNNLPSRNTNIPNLPPRPPPLNIPQQQQQYKPLPSPPQLQSPQSSLNQSLQIPLQQQQQVQQQKLTTHYILPPQNTNLSGKNLQRSSTSMLLNKLPPPPFSFNKN", "length": 817 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA1-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNLNITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSGSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA6-1", "protein_name": "Alpha/beta hydrolase fold-1 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKINQTPKKHKIIEPNRKGYSIVGKNTGKPNKIYFETFGNGPKKILFITGFLSSSKGWCKQIDYFTNKKDQYEICVFDNRGIGKSNIDSKYSYNFSTKSMAMDAIDLLEDTLKWDKVHICGLSMGGMASIHLSSIIPEKVQSLVIACVPNGYFLPFFSMGVFNYIRAFFFTFNEKKKARIFQSLMYSDNYLDEKTNGSDETRSEQMFKKNSTGFKDDGPSFLTILGHQIGYITNRFSKKSLEVIKKYSIPTIVINSKKDSLVTIDITKKQIVNPLKPLNFHVIEGGHLSQLENPTFFNKLVENHVDKHSNWDHSTFFQVEKQQFQRQSFMTQNILYSKNYLSSNTLSSSFLNCNTLRSFFNKIKV", "length": 366 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZT3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551H6-1", "protein_name": "t-SNARE coiled-coil homology domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MATRDITSSYILSRTECKNRAKIINSAININIKKSGSGYKRLEEENYQDIDIDNNNNNNNINNNNINNNDNDNDTTNNIKNSNNNNDIQLNILDTEINIEQLNSLPPWILKLNDIDENIKKIISLIEKFKKYLKEDIDKILAEDIEMESRIDCERSIELLTMETIRLFHKTFDMIKYLNKSNNSSQGENKMKKNTQRMKSAKLKALLITFKHIQRSYLALLKKVSSLQRSLSSSFLYRSGEYDVNNDNEDYGENSSISNSHYLQHHHNNNHHHEDDHDHEEDHEEIMDELNEMATTLIERQRVSQLIKETSHLIQDVGSMCVKKDSIFDRIDYNLAEGEELEFNGTILICDGITNGYERPENEKRKKLLLIFAVLIIVILFIFILKYVIEI", "length": 391 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551V5-1", "protein_name": "EGF-like domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKYLFRFFIFLFCITRINSQTGCFFRETGADYNIDSVFSVFYVDNLFNIFGMTFYMKTCTYVTCDPWRQTMICGNYNSTTFQLGPYQSQKVTLNKNGISIEYLSDKTPPNHPCPTITTTVKFICDKSVLSVPKSDYDYVGTCGVQIKLFAIDYCQTCSKCIASHGSCNSTSGWCTCDSYTMGLNCDQLKASISSVVAPTIDGGSVIISGDFSSIYSLGPSLVITIGSLVCSQVSFAASTTQISCTIGAGQGYQNLTISDGSGSTLQYKQFYYHYPCQEDCTPYGTCNDVIGKCTCNYKYSIGADCKTLNLQLTSVKPTLLDGGQAYLVGDFSNVTGLTLSVKIGIKECTDVNFNETTLQCTIGSGEGIKDIIITSDLLTYSKIGAYEYQYYTCPLGCLHGTCNKYNGLCVCNNGTYGDQCQYIECPLDCSTPNGVCDKDTGICDCDDKYSGEGCDFIKCPLDCSTPNGVCDGKTGICNCDEKHSGDSCQFLQCPLNCSNPNGICNRNTGICSCDSKYSGEGCDFIKCPTDCSTPNGTCDGKTGTCKCNNPYTGENCDEIAKCKQECSLKHGTCDSHTLDCICDTQTKGLSCEESRLLIESADPTSLDGGTTTITGYFGTTTSLLSIKIGDSQCTNIKVESDTKLKCDIGPGEGTHNVTVTDDDLSFTGVGMFQYVGQINKISKISGGAIAGIAAGCVVGVSVLGAGGYYQYRKNKKIELFMS", "length": 722 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q554Y8-1", "protein_name": "ADP-ribosylation factor-related", "gene_name": "arrB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGMGFSFIEKKDFKRFLILGIDNSGKKKIMYRLKFNKDIPTRPEKGFFVETFERRFKYNNEDVCGQNMIRPLWPNYYTDETNGLIFVVDSSDQERIEEVRLEIKKLDENIKIFKNHPFLIFANKQDLKNSLSIEQLIDKLELNKLSLNRKWHIQSSNAITGDGLEFGLNWLFSSSHNFT", "length": 179 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555E8-1", "protein_name": "Putative fatty acid elongase DDB_G0274669", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METVQSIITEWTDPKSWEKLVQHSFKDSNWKELIDPVNYKFNFGVTPFSQFQIIPIVLVIYLVTIFSIKFLMKNRKPFSLKFISILHNAILCIWSLIMCVGVLYEIIKRVSNEGPLFTVCEDPNGGFDKGVTYYWSYIFYISKFYELLDTVIIVLKKKPLIFLHVYHHCKTVWWKKYITMIQILQFVCLGIAGVLHVYTINTIGCFTHYPAFAAAYSINFSFLFLFSKFFVKSYTPKNSNSNTNIKSKKID", "length": 251 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555Q5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MRSIRIKKINFHIKQGEEQLKQELNNYCEETSLKYISARIKKRHNDFTINAVKDAQGRTINKQELIEEEYVKYYSNLYDYKEDDAPSHYEMLENWTVTRDSTWDNLENEFTTQEILEVIKQLNPHKSPGPDGIPNLFYITHKEKLAPILASAFNDTLRNPHLISKNYKEGLIITIPKKGDPELIKNRRPITLANCIYKIHSKLINNRIIPILTKVINHNQKGFVPGRFIIDNIISMNELINYCNDKRINGIITLYDFEKAFDSISHGSILRSLQHINIPTNIINLIMNLLTKSEARIEINGRTTIPFEIKRGVKQGDPLSPTLFVLVIEALARKILQDDRITGLPLNNSDHREKFQSFADDSASMVPDSQQLELVLQHFNSFCKATSSKLNIDKSSSILIGNPDNTNQRIPISTNPERYLGYFFTGKGITRKIPEILNTIRSSLVLWKTTDSTIKTKTNILKAFALSKLTYYSYVENFKEEELNQINKLVEWFLSAPNTKMLVDFKITPKLSPTAKKDQEVNADYANHRFHKEYFEWNYKAIDYDLTRSFAYRNLMALILHNIWIWICNQIYSEDPLTDESLSYSSLLKKWHKLATLEYIKKAKDLKNLSAKDHNNFKDPKILLTSTIKLRKTTANYYCIPESSLPNIISFDQFI", "length": 655 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556H5-1", "protein_name": "Cofilin-3", "gene_name": "cofD-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTTPKPTIAKISPECQTHFQDIKFRNKYQGILLKVNEESNMVVDKTLVAEGEFSELAQSLPTDQCRIIIYRYKSGEGSKLFFIYWGPDSAPQQDKLIYGNAKVTLAITLKGIDHKISASNLKEISEQVFIDRITPKTA", "length": 138 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556J5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWNHNLCHAINLDRQFDHINNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKNNNNNSYDYSFSVHSSQQYSRHYPNSCNNEQTKPKDYYDHASRSQHDYHANGSNNGNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNNNNCDSNYNSNNNNSNNISIANIKYQQDQHYQHSDTYTSHQYNSFNDNNNNNNNNNNNNNNNNNINNDNDNNGYNQYDESEEDEEEQDDYDEFDIQDSASSYNDNCGVLNSNTYIYDYQSPQQPLYSNEYQNNNHQPQQTDSYNYNNTNNDNNSYNINNNNNNNSYNNNNNYNNSNNNNNIGNIDSNTNNNNYNYNYSNNGDVYNGYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNMNNMNNMNNNIITSNREQFYSNNNHNNINQYQYQSQQQQTQQQQQQTQQQQQQTQQQQQTQQQQTQQQQQYLTQYYQQELYSQSYKCRPYYQNSFVISKC", "length": 480 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556P1-1", "protein_name": "CWH43-like N-terminal domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISSSLKPSVLLWILAILIPSTLITTYTLTVLLFHGIRRTVPYISDTIDFSPESCIGTFFISISAFLVFIVVFVKHFLLQNNINQNFNIDIILNENENEKKKNRAKMLNRISTFLGLICGVCIHGVSSFQYHNTGLVHSIFAASFFFTGFIYIFTQTYLDHKFSKLPKRILILRRVISLTTSVFIGYIILQFFIDNLAPILKIISALSIFFYLISFFYEFSKITINFQINTISQIEHQKEYNENSALLISQ", "length": 251 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556R5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLINAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYLKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKPTLQPSTICADTGVYSESNFTKTIQR", "length": 861 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556X2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557C9-1", "protein_name": "Homeobox protein 5", "gene_name": "hbx5-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METIVNNQNNGQQNTVPTQSFSSSVYMNYDFFDSQQLQQPQHQPQHYQQQDSFVSPNLDNNNPQIHVQSNNYNQNGFVGYNNSNNNNNNNQHMNNQYSNSFHNNNSSGFMAFQNNSSNFNNQNNNNSNNNNNNNNINSYDYNNSNNNNYNNNNNTHSNNSNNNNNNNNSNYWNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNHHHHHHQQQSQPTSPYNNPIQHNPNDMKFNGQHNPFNGNQMVMDNNNNNNNNNNSNVFNSNSNSNVFNSNSGSFLQINNNNGSFSSYNNNNNNNNNNNSNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNQFSQSYDSTLGNNRFSSMMGQPIQQQQSPPQQQQQQSFIQSSPQAIPASNCNGNGSTSSSTSPLSPTLIGSAPGTPTSMLATTLFGFNLSSSPTSSPSSPVKKGKSQSALALSSSGGSGGSSGRKKPQKHDSMSSITNTNLKSTQASTLKESKRSNSSPNLKKQMQLQQLQQQQKLNENGTLIPPLPFASISENITNNNNNNNNNNNNNNNNNNNNNITNNPLSGSMEFPNSNNINQSSDSINGEFNIGQPESPKMYNSSPSPPPNATSTTKGGKKSKKSLHISTTQQSPSLNGSTGGSMLTPTMSGLSLSGGGSGGGFSPLISPTGTTSNKDLQSSPSPSPLLKSMSMGKLDLQDSIDSMSSPLSPNSSLSSSNGLLPPPPNSNNMNSSGGIPTPSTPTSPPPLTHHINIFSNLEFVKQLKDHLLPNDFKPEEHALERNLLRFQQFVKTLAEPLQRDVVTSMFELSVDAQLQYGSNLDNDNLSALMLFRRKILNFNLFRMMMLNDPNSFIPLPSPFPIQTTTISSNGTIVNPTNVNNNNINNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTSANTVQSGTTSNSNLVFQQTSNSNTLSPSQQQQQQTQQQQSINGSSTGSLSDAQYQDLGIHLDTSSANSGCGINVSIGSSIGGGGGGSSLNGSNLNGSSSISGSISGGSSNGGGQFIMSPQFSLDGAYQQQQPSSYNINNEMELAEKDEDEIFNNNNKDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSSINSNINNVNNCNINNNSNSNNGSINSPRPSTPTTLNSSGKRSKKIYRGDSFGAGNDISTGLMASSDQIIPPPQQQQHQQLVNNNNNNMNNSENNILLADSNKGLSVSLGSLPTNTPSSMEIEQQQQQQQQQQQQQQQQHLNQQQILHQQLHHHLSSSLGGAQFTNIQQQQQQQSGNIFYNSPYNSSQVYMNPYGTSITNTSLAGPSTTSSAMQHMITNMTSSNIIVNNQNNNNNDQNNNNNNNNNNNSTTNSNVNNNNNTTNTPSSPPQPNNCTPTQTSIITSNGVVVPSLQMRGTITNPPPVLPTPDTLVLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQETPHTPTSNSISSPRSSPVHQQSPSNTNTTTTSTTTIRHSAVTQLSFAGLHNQQVSPISPRSPRSPHGTSGDYNDGSQSPSSRRKNRFTDFQIKRMNDCFENLDKNNNGKFTSEEICQIATELGLTDQQVRVFFQNKRARSRPSPRGQPTNPLTSSTNNGNNSNLALQHLQQQHLQQVQQQQQQLLQLQQQQQQQQQQLHQQSANTTPQLNSMNPNSINYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNITTINE", "length": 1723 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557D0-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTGSNNLNSLNNNNNNKISLQETIQDIIKCSICLNSPKNPRFCPRCSALFCLECIDRWIISNPTCPACRDTLTSDNLNSNLIVSNILNELVKSEQEEYTSSDICNYHGYERLYYCSTCQEPICSDCALFKHKDHKIEKLSINFNKNLEILKIEEEALKKRQEELIELNSFLELDAETLLKNKSQIEKEISKVVITMKARLKYDFERRYNTILESQEKINNELTHLDFIYNDLLNHYKKSPSSFVLTSQQFIGVLQSVHKNSIMDIYTPINTDLTSELIPPFENRLLKFENFTTGDCLFSSRIAFYGMTWEIKCGIEEDNCFLNLKVLECNSDGKYFYMFTIVNQKTNVNKLIEFDLPFQAGETFYIPNFSSKQTLIDEGFILPENDILLLQFSFRPQNYFCYSNDLKRYIDILEYRHRGYFGEEDEDDGTIETTVTKLPNDKSTILGSDNYNDNYNDDGIGDLDEDEEEEEDDEDDDDNLDDHLQYDNDDDEDEEEDDEEQNEEDNDEEGTNIPTSEYEDLDTSSASVISNINRRDRFKNNNINNNNQFVNSNNNNNKYNTTNSNNSIVGSSRYINNNNNNNNNNNNNNNNNNNNNNNNNNNNNYILNRSYSTNKIYNFYQDEEEEEEDDDSNIDDQDEDEEEEDSEEESSLSSSDLQDLDSSGDQSSLEFSFSKYTNNYYSNNNNNYNSGGGGGVGGAGDNNKIECIRRDFNNLLKRINFTNSQLTNLKPGVPKDGDLLNDDENDKKCNIPLNEDEEEDEDEEDDVNKNKTTSTTTTTTTATTTNEVVTINPNTISNNSQDEEEVKSDIVKLLENGIANMLNNSNSSNRSSNNLKQQQQQQQQLQKDDQKQKDEQQNKSNTGCDIDQLNILSKLSIKESCDSIKNNDNDSLGNSTNNNNNNNLNNNNNNNNNNNNNNNNNNNNNNSNNNNLQSFLQSNENTENETDFNDNNTNPETNTETENEYLTSSNMNLDGGESEFDSNKSYEGSSTDENFNSDEDYQDEDNFNQDATGSESANNDDYLDDNEREGSDSIENYDEDIEKVLTSHNIITTPSIPPSQQPQPQLQTQPQTQPQSQPQSQPQLQPQSQPQPQTQPQLQPQLQPQLQPQLQPQLQPQLQPQLQPQTQPQQQKKYDDLSENQIQTENRNKKIKEEINNKTNNDNNNELGKSSKSNTSSSSSSSSSSSSSYSESESSESDSNNEYDNEDEDDIVNQVSNFNFNFNDASNFKNFSFRPKFPSDENDNDDNDDDYEINIDLKNIQKISPILRAIENGESNINHYQSPVSLSSSSSVSSFSGSGNSVPITATTTTTTTTTTTTTTTTDDDSGINMPISPLSASPPSPPPQNEPQINNETNDNDVKLPQI", "length": 1364 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559A9-1", "protein_name": "Probable polyketide synthase 13", "gene_name": "pks13", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENFKYRNNENDVAIIGIGFRLPGCKNFTPNELWNNLKNGFNGVVELSNRWSDNFYTMGKVSSAYAGLLPFDELKSFDPLFFGINPTEVPTIDPQQRILLKCTWEAFEDAGIDPIKIRGSNTSVFIGTSTNDYQRIIREKDQTITNAFGTSLHATSNRISYCFDFRGPSMTLDTACSSSLNCVKLGYQSIRDGTSNLSIAGGVNLIIDPYFTASISDLNILSKTGSCKTFDASADGFARAEGSGIIVMKNLKQAMIDGDKIYCVIKGASSNVDGGGLQDKSNFYAPSSLSQCNNIKMALKSTNGTVEPKDISYFECHGTGTPTGDPIETRGISMVFNDESRSKENPLLIGSIKSNIGHLEAGSGIASLIKCCLMFKNKCFAPNINFKVPNPKIKFEEWNLKVVTEPIQFTKSNTCIGLSNFGVTGSNCCLILSQFNNNNNDNQIVGNNNNIKSNKEYLIPFSSNSVKSLENYQQLLIKNGENEFKFLEFIKHQIFTKPTSLYQRSVVIASSWDQFNNAKIMKTSNSKSSNISIERNNPITVFVFCGQGSQYDRMGLELYNNDFIFKESMDLLDNKLSKYYGYSVLEKLRNCDSKSIQHPMIAQPVMCMFNISLFELYKHWGIEVSFIIGHSLGEIPAAYCSGMINIDTLCYLIYHRSIAQTKTHTNGRMLSINISADEYFSQYSKQYPDIEIACFNSPTSIVIAGNEQKLNEISEILKEKGIFSAMLASLSSFHTSSQNKVKEDIVNKQFDSKQSEIPIFSTVTTNLFDSVTSPFNSSYVFNNIVSPVKFSQTISNLYKHIESNQLGNDIVFIELAPHPTLQFYLKQMIPKPTNDDNSIEFKVSVYSALNKKNNDIEEIQRTISQLYCDNGYNVNFKCQFQHDDTHGSINSNINQLSNISLPHYQWDDEKYWKEDPSISKLIVNGPQTDNLGYLNENSPNSKSYETFIDIKRPPFQYLKGHMVKGKYYFPGCGYIDNLLKIYKSQDLTINQMGFKSPLIFIEGVNQALQTNIFKKSTSNTTTNNNDEFRVEYHFNDQKTNRWILSSFGDFQLSNHSSNSDNLEKINIKQLIQNQCNLTKLSRDELYSHIKSKTGLTYNGVFQGVNKCYLGENCSLSEVSLELKREPSSFFNTAVLDTCLHGMLCLLEEQSQLVFDRIEGFKYHSSNVPTSEEEMKIHSNIYVYSTINPSRIGDSYSASIVIMMEDGTVLIEIENAVCTSLTPIKESISVKYPTNQLFSMYLQSKDSPIPSPLNFKSLYNQNQQQLKIDKQFTDWMQKCEKFISNQFFKNIEKRNPEINLEILNSKTIIELKSKYCQNLKNERLFQFVFETIKQLGVNAYDDDDDLTIDSSEDRKSIYEILIKSTKVIPKLLFPLEDEDLTIDSPQSLFENGLLDRFYNNPNLMTNQCQLIAQIIKESLKPLLNKKMVFRILEMGGGTCSLSVVVLNLINQLLLENPSFEIDIEYTWSDISPSFISAAKEKLSHIDKRINILYRSIDIEQPFIEKQDLSPSYYDFVIMSNVLHVVKKLSPSLDEIHKILTPNGHLLFVEIPYKELISDSIFGAFNQWWAFEDTDIRKDRCSIPPNQWIQVLSNHNYKDTIVSDNKECTWCCFVIHSQKPSLLELSKKIECNQYDNIIVFGNENSQDNFTKSIKLSYNNNIIKWVSNIVEIKKFIKLNIITNNSIIYFTKGIEELTIDNFKLINFQYIQINQLLLKYESKCKNVLVTRDCDGSNYLASSLIGAARYFDEYRQLELFTLDFDNDTIQSCDECSSSSCSNLIKLIEPLIDPKINIQREFLIRNNRVYFERAKLETNLKKSFKSESFENSNKLISTLNFNLDYQLQSKPFKQLLQNEIEVEIKATGINYRDYLVFTGSLPIEKTNHNGISNQPEFGVDFSGIVTKVGGGGGNGEFKVGDRVYGIGHNTTSSHITIDSRYASLIPNSLDYIEASSITSSYILSLYGIFDIGNLDIQDNESILIHSGTGGIGLSALNSLRWKGHKSHLFVTVSSKEKEQYLRDNYGSFITGIYSNKDKNYPKLIKEKLNQLGSNKQGVDLILSSLPNGDDNLNFKCLAKNGRIIDLSNNIDLFNISKSKIKKLLNTINDGFESGELQVIPIIEFSNSNIRDAIEFINERQHIGKIVISHDDSNLLIDLINKHSNQPNYSILKSDYQISQSNLGKNILITGQSGIVLEILKWIIKFSNSIENVIILSKSLMKWELELLIGKTMKKANNKIKFHFKSVDVSDSIQVENSINQILNDNPNIVNIDSIFHFAFTQITKKVEEIDMESLNVSHNAKTIGAINLHNQSINRNWRLNNFVMASSATSIIGSTDQCSYVCANTVLDSLSKYRKSIGLPSICTNYGAIESAGFVSKNESVAAMFNGIGIISISTDLILGTLDLQIQNQQSSTNLMLSDFNFLNFVNNNLQLSLISKFDFQTNLAKNQVNEKLQNQTQNQNLQIQSPSSTTDCQTIIKDSFLHKISEVLSIDISKLNLDLKLLDYGADSLAIVQIKNWIDMEVSPNLIVIQQLQTFTITSSIQYTINSFLKKKVQSQE", "length": 2551 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559I8-1", "protein_name": "Uncharacterized protein DDB_G0272530", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIKLILVLIVFLTIVNVNNSIDLCLSNPKKALVNQACKYSTDCEYPLFCGSGNGYGKNATCSKNIETGGSCESNNQCTPCNVCFNAKCKVKLYLGDACDENKSYCSSSVCIKGKCSIQGDVCTANNQCKFNNYCKSGKCVPLEKEGSSCDKDSSCSLTNACVGGKCVTKYQKPLGAVCNSSNECQVFSGHVCGANGKCSVYNQLLSKCKENSDCGPNGMCMCKSETENVCVDLSVGALKNDKCPSLLSSFSSCMTRERCTENTPTGCPKCYPIFMCYQYSCFYMNQFIRSTQNYYKSFCS", "length": 301 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559Z2-1", "protein_name": "E2F/DP family winged-helix DNA-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNISLLLNNRNRNRNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNGNANESASLNNGSEEIRSNPSSNFSSPIQSSLSSSSSSLSSNQATTPKKRSHAHKNSLKCQSPQMSPQMSPQMSPQMSPPLQYFPQHQMQHLSQYQLDHLQQQQQLIQQEQQEKQQQQQQHQHQQQQQEQQKQQQKQQQRLSPQPRSSQPRSSPPRSSPQRSPQLNQQEGHINSVQTYSGNNINDKNQNNTNNNNNNMSNNNNFHDDNNCNVNYNNIRNNSNNNNNNNTNNNNNNNNNNNNNNNNNNNNINNNNNNNNNSNNNNWNNNYCNNSFADETNKNNTYGMEYINISEENQYNNNNNNNNSNNNNNYNNYNNYNNNNNNNNNNNNSNNSNSNNNNNNNNNNNNNNNNNRNNIINSNINNSNNNNYNDNGYNNNSNINSNDSYNNNNNNNNNFNNNNFNNNNNNNNNNNNNNNNNNNNNKNNNNSNSYNNNNNNYNNNNNNFHNNNNNSAHNNNNNNYNNNNNNNYYNSNNNNNFHNNNNNNNNNGNNFNNNNNNNGNNGNMFTNVNSIDNVNRNNYNNYNGNNNYNGNNSNNNNNSNNEVSQITTTSLPVKKTKVFKAPREKKFKRGPDQDIREIKPATALLKQYFIGNSITEFNAERVGSILKINHEKLKDILDIMECASLVINNHSNNYVWLGLDNPGFLKLVFNVFHCSSNLVTKEPEFACLKCKENAYRCPTSVDLPKDTRLGSTVCQFMKLLLSKRIRTNPVNDFLTIYQVCFNFNFCSEGRCPEEDFKYLRNTAKVKRCYDVANVFNGLNILEKVGKSKIHSYQWCGDFTIQDCENGCPFGHPLLTPGTAYTTNPSPNPFNQFSNAYISSSAQSSLSNSPFIQGGFHGNNNNSNNNNINGNNINGNNNYGYNNNNNYNNYNSNNSNGFNNGNSFFQQQQPLVNSGVSMVRNNNYSYSP", "length": 964 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55A39-1", "protein_name": "Transcription initiation factor TFIID subunit", "gene_name": "taf9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSSNETLPNSEQENNSKTDTKNDNKNIGDENKIIDTDKDMKDNDTINGKENGNININSNNNNNNNIDTDKEMKETSSIEEDDNNNNKNQNNNNNNNIKEENDNLTELKNNNNKENKENKEETIKEDKEKENNKEPVKNKEETNNINNNNNKNNNSDNINNNNNNNSKETLNKISSMSKVSLTSESSEINGQVNTGVVNNNTNIDITQTNLDEPRDSRVIKSILKTMGIQAHEPRVVNQLLEFMYKYVFEVLQDAMIYGEHSGKTDIDVSDVRLSIQSRVNYQISTPPPRELLLSIAEEKNKTPLPPIPNRYGVFLPPDEYCLTNPNYQANPTKPVFQPVQPLVGNTSRGNYNKKQSDKQVSIKFNSMSNNSTTTTTTTPPTIGSQNGTTIVSPPNLGSLGTTTTTTTTTITPPPPILPLSSNIKPPTLSIPSSITSPPTVTTKNTSTPIIGLGSTTVAPPKTSSSSSTIAPPVLSLPTSITSPPTVTASSTTTTTTAPTTTSPTIPSLSSPTTAATTITVKKEDVKMDDFDDFDGQMKDDITPSSTPQQPSQPTESETTTTATATTTPAVTTTTIPPTTTSTTPPTTATTSTTPPPSTTTTSTPPTTSTTPPPQIKEEK", "length": 619 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55B17-1", "protein_name": "Amine oxidase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKKILLIFALFILVNINFASSEFKKNETESANLKSLYASYLMKNNNNTKYNNNDNSNNTNIYNDSVTKNKSKNKNELTVGIIGGGIAGLYAGMLFIKSMIFDDLGIDYTILEANKERVGGRVYTHKFDDHKYSYTDLGAMRIPLTPLMDRIVSNQNYSLFSKLAKGGYQIPTVPFLISVNNEISYYNGIRVLKGSPVLNPSDPFNYSDSNNGGPGKGIPDEYANRTVDSLILPVFYQFINNLTVDFYNGFKQMLKYDSYSARDYLKTFHNYPNSVIEYIENLSTISGRLDQTSITELLMSVFDFSGEKFVCVEGGTGLIVKSMSQIIKKKVEMGSFVTKISKSFDKKNNEIDGLNVEVVRDSNFGGSDTEILKFKHVISTTTLPALQRIDTSDLKLPLKLKVAIRSLKYTGAIKLAINFKYRWWEDSEFMSGKPIRGGSSNTDLLLRQVVYPSYGINNGTKGVSGVLLASYSGGLESIRISSMIGKKDKERKLLNIVLRDLAEIHNVDLKKLKNLYKDHFFQSWDNDEFSSGAFALFSTSQYTELFPSTGQSHVDGRFHLSGELTSVHHAWMIGGLNSAYRSVDLILKNEGFEDLRIKLRNNWGTIEQAEYPSLDWYKYDSDINHYKLY", "length": 630 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55BT6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLLYIVVFLLFAIKLCCSEYCGETYCVENRNCYSFIGCRNSTCLYETIDLDDEVDCTVDTCSDRYGVKNTPNNSLCPPENLCDMFLCDTQSGCVAIPKVNCPAPNPCQIPLGCNRETGICEYDEIDCHDDNECTNDYCDPILGECVHFSNDTICSNKASNFSTCVLSGVCGEFGCKYVEDNCNDGNPCTDDYCDFKNGCVSQKNDWNCDSLSACSEGICTDNGCVQQEVDCDDDNPCSEDFCHPLFGCGSILNDTICTNGNKCVNSTCTEDGCSLPVPIVCQDGNPCSDDTCNPSTGCQFTLNNSNCNDGKKCTIDQCGLNGCTHTNITCPPKRVVDIILIGLICRNHYCDQSTGNCVPDMNSVSLLCI", "length": 370 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55C69-1", "protein_name": "Chromo domain-containing protein", "gene_name": "hcpC", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGKTNKKKIEEESEEEEAGDVFEVEKILDKRVQHGRIQYNIRWKGFSADYDTWEDEANVVGCPELVREFESSRIKEKKKNRKRKNVIIDEDPTEEISSSLSSILSSPQPQPPPPLQLTNHSPASSELAITTNTFLISNCTSTSNKTKISIENEEIIKNDHARYGVPYVEGIGFENGDCVDEIVGCKPFGENNLLYFFIRWRGKEKLSWVSNESIKQKEPLQLIEFYESRLKFGYKGEEN", "length": 239 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKNNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH7-1", "protein_name": "SsDNA-binding transcriptional regulator", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIFKITRTKRRWTKNQKKILVMKVVEKKVVVKKSKTPNTSPSSSSSSSSSSSSSSSSSSTNDKSFNLSDKRKISYSNFKGLERIDIREFFEDKSGELKPSSKGISLTREQLVVILENGDTIKDWIKESK", "length": 129 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CJ7-1", "protein_name": "diaminopimelate epimerase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEPSIDNKPSFRINFTKMHGAGNDFVVFEKNKVERLNGDKSTVTFEEIVGFTTKIAHRKLGIGFDQLIVIDDNPIDKNAAYGMDVINCDGNIEVMCGNGVRCFSKYIVDNKVLSKNLKEQLNFDGDDDIEQIIETKSGIVKTYPLLKHHLNNKDNDVIMVKVNMGTPKVSRFINEIDRHIPKVLTNQSPIESYMYTIDIGLPYCSKLECVYVTVGGNQCVVFIDRNIELGYLDSSYGDHTKFSTIDFKEISDIIQSNVNGFDDIPNVEFVIQSPQDKLENKVISRVVERGNGETLACGTGACGVAISSILKGYCNENTEITVEMPGGKLLIQWNPNNEIFKTGPATSVFKSQILI", "length": 355 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CV8-1", "protein_name": "Lipocalin/cytosolic fatty-acid binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MELLVGGTILGALTYAYSSLKRTIPEGAHACSPFYPEKYVGKWYEIARLDFYYERDMNNVSAEYTLNKDGTISVINSGYNYVEKKRESVNGKALFVHGSDEAMLKVSFFGPFYAGYNVIAIDPDYKYALVAGRSLDYLWILSRETSIPDHIKKQYLELAESIGYNTSKLIWTEHDNINNKKD", "length": 182 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D49-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D57-1", "protein_name": "J domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIQVKNKIKIISILITLFILTINQVVECKSSLYYSILNDYEKGIDYYKILNVTKDSTYSEIKKSFRKLSLKHHPDRNVEKSSHSLYILLNQAHSVLTTDETRKEYDELLVNGIPWHENYYGKYAYRYTGISHDLRHVLLGLIIVITIGKFVYQYNKHHSMIKRAKQTDQYKKRLAQLDGDEDEIQLVIQGADKPTISSLFIIQLFFIFPFKILKSIYTFIFINKFKFIQKTDEEKEEEYRLKMGYTKEDWEYHKKKSIERMEKLKQSGKYKKYLRSKNK", "length": 279 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E25-1", "protein_name": "DRBM domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKSHTSEKVQLNEFLQKKKQPIPIYHTESKGSEHNKDFKSIVVVNGKQIESDWKKSKKESEKDCAKNILEFIETLDGYPIYFTPFSKDPPQNNKKIYDEKLQAVYNSVSSGIEGLNNNSFFTKIENNNNNSSSNNNNNLDHNHSNDSSHTSTDNNDNNSNNHNNNNNNQINIDLTMENVNISQSKTITNEGTLNNDNDNNNNSIQQQQHQPQPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQCFDKDKTNLKKKKKIPFSYNTDLIEHIDLFKRQDFPQTYPSRTTYTDTGHTQQLQKQVFLLTEKIGLMELFYKKQIRVILKSHHNLETELSALKSFVEDCSVTPIEGLELYSIPVPLNPNAKPSAGTTPVLSKSETQNEIIQPTKPPTKPPASCLIKKKIPNVNMKATNKTTTTTSTSTSNSSTTIKTTDSFKNTTNNQHPNTLKPMVSKINQQTSDFIFPLPKPIIRRNPIGNGNLEKKIEKKNSKPNTIVLGVDTQSQSKTKITPSPTTPPPETTPTTPTTTATPTTPTTPTTPTTTATPPPTTTATPPPTTTATPPPTATTPPPTTATTTPPPPPIIATTKTTATATATTIPIDLNEIQIPIRSPQDLTVNQSMISTAMMIASAAQRNPKLTMKLKRKLEESPTLMSKLQKIQFEKEEEILCSQDLHSPIMSPQSPTHQPKTLEPLSPTKKSTQKSPPPTSPSPIVTRARASSNLLPIQNLISKK", "length": 733 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E47-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E48-1", "protein_name": "thioredoxin-dependent peroxiredoxin", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKLKVGNIAPDFEAKNYLGQIVTLKEFKEKSQPIVLYFYPKDNSPECQKSCEFRDKYQKSIEAGAEVIGVSSDGEDSHKSFVSKYSLPFTLLTDKHSKLAKLYGVNGILLPGRKTFIIDKHGFMAVFMMVYSVQLLMSMNL", "length": 142 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55ED8-1", "protein_name": "Decapping nuclease", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQTLNVIGLINFIKKQRSFNKSPITITKPLEITRFSYEGNQLFPAKLKKFKNPTIDSDLLVGFQGPDSIESDSQTPLSLVLNKLIETKHDVSKSNFISFRNSFRKLFESMYDSEKWNIQVQRINSTIHLGMDNPTQDFHQLKNFHLKSMYSGNYFEKISTIDNNNNPNDNKHKYCSIIQSKLFNNNFILACEIDCWKKSIQNNNNNQNNNNNENNNNDDDDENYNIDDYVELKTSRDIEDSKANYQFRSKKLIRIWFQAYIAGVSKIFLGIRNDDFFLKKCLNFNTHDLPNQAINWNKDEMLIYGNEILEFIKNNTCSGKSYTLSFNYPIISLVESDSINIINDQYLQYYLNIPKNFENNYNQNNNQNNNNNNNNENNSDDTKNNNIQNNNENNNIQNNNENNNQNNNEKNQKRNFGEEKEIKGDENEERLSKKQKKLE", "length": 440 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55EZ2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55F94-1", "protein_name": "Dynamin-like protein A", "gene_name": "dlpA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSVFKKKDKSDDKKKKHDEETPQGTFQPASQSTSNTNLNSLASSVNNGASVGSTNGSTPNNSNGSTPTYNHNNSAEELEKQKKEEDEKRKKSELEAAAAVVAKKKEDEEKQRKEQVELERKRRDEEIRRTNAAAANAANKELNEQVEISSLEQMGKLDPSSTIHDMFSFFPNEVYNSYEKLQYFSRDLNTAVSHPEIVFVGPRSSGKSSLIEAFIGRALNIVGGGNIVGVGGSNANGCSKRVLYLQFTNNIDFEVPKVTIKKDNTIKEFDHDIIVSIEQLNENLAKRNQLTNDYIEEPIYVSIESRTTLNLTLIDSPGLLFDQSQAESNKIESIVSSLLRPSHRLIIAVESCSQDWKSMSMGQYLKKIDPELSRSTFVFTKFHHTVRGFSSTRDINKYLSGTVPDIKGFFVTLPNHQVRASYSEANRFQEKIYQAHKRDMHALEQLQYDKRYERTIGVAPLRRYILNIVWKSYQDTIPRILKHLRSKRQTAEATLNELQKQSSSLDSTKLRSIASNYTVTFLQITEKLLSGTSEGNPSANGQTLDEEKSQQGDCGEWVDAYKEAIYIDPEEWNIPYWSSKLYGGQQLERLMAEFKAVCDNSKISEVKMDDIATASGINKLNNIPNYAWAASDLTSLISRDTFVPLIEQLCERAMYIMKRLTDIADKVIDSRRKSRCIGSSPFGGNGLNNINSGGNNGININDRLSNTDMDSLDQYPFFTHHVKNLYYDFVHRAAKGCKEKCMDEFYSSRTIYWELTEHPDSSLPSIRNDHHETKTAVCQLATKLFDSIRQRITKNVLLKLYNFFLVPMQTDLWNEIQAQITCLSNEQLEQLFEVQATREQLKQEEKKQQQILEKYSQIDEQFLKAASLFCRPLSNPTPSA", "length": 880 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55FX4-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDINSNHIKKINDFKDKGNKEFNKEKNKDKLNKRAITYFQLGIKYFNDEKHKIEINDQINKLISILYSNLSLMYLKGDEIILSLEASNKSIEFNNQNSKAFYYQSICKSYLCDYKGSMESIDKAISISKQDEKVVQQRNRLIEITNNKVKEDVYFENVLKNQKLENVAYENSIEKGRYLISKRLIKRGEEILRIAPFSFSLNGKYVSKFCGVCYQKKSIDNLLKCKDCDDFAICKECKAPNEPLSKYHPNDLCVLYKLNNEYYKMNNFEIANEDNKERGLTDERRLYINTIYNIFKNKTNNKAVVEVDNAISSSVIDVLNLSKKLLNHTNESQRAYSDSTKMKTDILELIFKSFYGANTLKKDEISNIIRIVDCNSHGYSDVISQKKKASGLYPFSCYTNHSCIPNSDYFIDKHGVMVLYASSDIQESEAITISYIYFLNRVEKRRKDLLNGHNFFCTCDQCSFQSSLTEEVCDKCNEIIPSTIGNSNLVYKEPKSLKETGFNYICPKGHTKSSLVYDIDNDQLYPTIAENYSKCKDLRNFRKINIFKEMLENRDFVKKLTPREFEVTPLAKYIANPKKSNSMLFEELINLVRGSVECGLTKSIEESNYSTYLVYDYYDLYKSLLLESKPQILKLNSIRDIIIKLLTPMVYNQNKPRIDKKLNKHLSNKINLKKNK", "length": 676 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55G93-1", "protein_name": "Tubulin-specific chaperone D", "gene_name": "tbcd", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENSEDISLNSSEKSIESSVVNLEDQQQSQQQTQQQTCQKTFVQEAPELTILIDKLIQLKHSNKDELISNTTRIIYIIDQYLEQPTLLDIHLNDIIQPLINFIKSNYINNSNNNNTTTTTTTIMTETEIVIKKLSIKNSFRIIYVLSKVRGFKTIVKLFQHEAIDLLPVLDQLEISYHQWVNINKQRDRLNEISVSYSSGINLKNYIKPEEESEQEVVDENNNNINNNHNIDDEYNENIISWEEVYVLALWVSLLVIIPFKFSSLDSASSGTASAAGDGGDGDGDGQLKSISSRILKLGKLALSDVSKIRDSFSELLSKLLNRPDMKFEQKQFIKWCTNSIQLISNNNNNNNQNNSSNNNILLIIGIYSTLATMFKKGNRLDFLPIDMNLYEKIMEANKYLSLSGSERITKKIFLKLLQRIAIIMLPPVSASWRYQKIIKPLLLKGELIKQINNNNNNNNNENNNEEGEEEEEEIPEEIDEILEEIMKSLKDKDTIIRWTSAKAIGRIVNLLPKDMGDQVIGLVIDQMFEKNEFIDADPSAWHGGCLALAELARRGLLLPERLDVVVPLVIRALFFDIIKGTYSIGSHVRDSACYLCWALARTYHNSILSPYLLPICRNLVVVSLYDREINCRKSASAAFQEMVGRHQGLVPNGIEIVTSADFFTVGNKNNSFTSLTTFIGKFQIDYYPIVIKHLATIKIYNWDLEIRQLASKSIHLLTNINPNDIVSNYLPLIIPNTQSDLVHVKHGASLAISEILISLFENNNINLLSDNLKMMILMTIKNTKNEKLFKGKGGVLIRIGMCKIIYSICLVEFSLDKNLSEIKKPTESTSTNGNEDRAAALKLKIAMLKAKTASQINKPIITPPSSKSTTNNNNNNNNNNLNDNEIAFNIILGYLNENLNHPNEEVQKEASKAFELLFSKYISSNEKISLLLELIDSHCKTLKFDINRSARRGSSLLLGSLPFNSANLSYDLLSKVVNELILSIFQDDPKFKDIETRVNSISSLYKIGIYILNLIFKNQENEQKEEEDFKKSKNYNLFIKIWNCLGLATNDYSIDKRGDIGSWVRELSCKVLFDFIKFIITNQNSSTTTTTASTTDLSIENLINEKMITEFICKLFQLSGEKLDKIRDVACKIIHELLWIENPSSINNIPHKEELKKIIVKDQDVHFNWFRTEESLPLICKVLKFNCYLYPLLFGLFSSLGGTSKYLINDSIQSIKQYFSSFDNDEKERFEKIISFSKAILEITNNTTQRMIQPTFRSIYNLLSTHIFDFLIINNLNEQSIFETILFNCYQIIESNQDDIYLLLNSIELFSYFFIQFENNNNEYIKDYSLKALLLLLSNLKYPKVRKLASDQLKKSTRLFINNNGDDETPSLIKSLIFNTKWDDSVDLIIEPLKSLLLLLNQKHLLELLSENPTKKPIPLAPPITSIEELKDKIQNPHKQSDDNNNNNNGELINNNTENNNNNNFDDNLPEDSQDLMEI", "length": 1480 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GP8-1", "protein_name": "Rho GTPase-activating protein gacO", "gene_name": "gacO", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSKLPPPPVQSSPQGFQLPSLHSVQLKPVRPPPQPTQQQLASNTSPREVGTSLSPQSPSNNINPSSSSSSPSSSIRQSPSSSPNVARKVPPTPTNNNGGPPTTTTTTTTTMPPPPAFIKKLSPSSSPILPKRIVSSPPLNGNTAPPPPPIVHLPPPPPTNLPPPPTLSPSSSTTTSPSSSSLNLSGGVPLPPRILRNSDGSANNNNNSNNNSNNNINSLNLSTSGGIPPPPSFFNNNNNNNNNSGSFVNSASSNGSPSLQSQNSVGYFKPPPPPVPTRSASLDPKQMGQFIKPQQNQNNSNNINNINNNNNNIILPPPPNININNNNFVPYIPSNNNQQQSTTPPPIVSISPLKRNSIDNSVVNKRLSQDLNTMLVNRLQHGLSPPVATPFFDDKILGSASKSAELKEKRDQEERERRERERIKKEKEDSEKKEKKEKKGKEEQEKKDKKKKEEQEKKDKKKKEEEEKKSKSSSSSSSSSKKSSSDNTIVNQNIFNNTLSQIMENQRDAQSLSPSSLPYPLILKLLTESIMSLNGPYTEGIFRITGSGTEVNRLKKQINEHDFSLDTQDPHVLAGLLKLWLRELVHPIIPSELYNDAIKSRSKEEVSRIISLIPDQNKEVLNFLIPFLKNVSQPHYAQYSKMDIDNVAMVFSPGLLRSTVLTTDLLLNSQYEKDFVKCLIEMSP", "length": 684 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GR8-1", "protein_name": "Thiamin pyrophosphokinase thiamin-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKQEEEVQQQQQQQQQQQQPDKNNKETITWDVAEYGGYLFDKKLKAHNPLNHQMPLQYHHSQSTPHIPSSLSTSSTTSIKKPSSSLSDDESGGSSSSTPHSSNTPRKQFSFDDHCALILANQKLPKKLVDYFWDKCSVRICADGGANRLYSLGTKINQSSRWIPDYIKGDLDSLHEGVSDFFSKKGSSIVLDSSQDTSDLQKCFELIIDLEKGSGIKYRKIFILGGLGGSFSHEFANVNTLFDHPGRKIILASKDNLAWLLSSTYNHNIICRSETKCSLIPLSSKASQVTTSGLKWNLVKQSLNFGELISTSNVSLDNKVCVETSNPLIFIVDINP", "length": 337 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q561S0-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial", "gene_name": "Ndufa10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALRLLRLVPASASARGLAAGAQRVGRIHTSVHCKLRYGLLASILGDKTTKKLHEYSRVITVDGNICSGKNKLARDIAEQLGMKHYPEAGIQYSSSTTGDGRPLDIEFSGSCSLEKFYDNPKSNDGNSYRLQSWLYASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGFIRKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVSEIQSRIQKKGDPHEMKVTSAYLQDIEDAYKKTFLPKMSEICEVLVYSSWEAEDSTKVVEDIEYLNYNKGPWLKQDDRTFHNLRMLVQDKREVLNYTTVPVYLPEITIGAHQGSRIYDSFRELPGRKYAPGYNADVGDKWIWLK", "length": 355 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q568T5-1", "protein_name": "Chondrolectin", "gene_name": "chodl", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRATLRILCALTFLVSCSRGARVVSGQTVCQGNPEHPCYKIAYFKDVSSRVAFWEALQACEMDGGSLLSIENTAEQKHIEHLLRELSVSSSTGPASITDGDFWIGLTREEGDNAQEPGAFASCPNLYRWTDGSVSLFRNWYADEPSCGGEACVVMYHQPTALAGPGGPYLYQWNDDRCNMKHNFICKYEPESHLVKVQSDRPGGHDVDLSTEDKEDRRTPPTDEDESPRLIIAGPSSMLLIYVIIPTIPLLLLILVASGTCCFQMLSKSKPRTKTSVNQSTLWISKTPKIDSGMEV", "length": 296 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5HYN5-1", "protein_name": "Cancer/testis antigen family 45 member A1", "gene_name": "CT45A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKAKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETASSPKSQREINADIKRKLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5I0J8-1", "protein_name": "PHD finger protein 11-like", "gene_name": "Phf11l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQEEPGGSNSVLNGDANSDKKMEKWTCALCPEGHDWSVIYFEPSSNIAAHENCLLYSSGLVECGPHDPRNPARSFAVKSVKKEIWRGRRLKCSFCNNKGATVGCDLQSCPKNYHLHCAKEDRAILQVDEDYGTYKLFCQRHAPGGQEPTQVDAAVKASFLKKCLEAGLLTELFEQIQQKMISIHGRFMDDTASESDYEGIKILLFDCGLFKDTLIKFEEAIKSKACECEERLNQMKQQLELLADLQQNLRSFQECGVLDPSGSTSGSLLPPEDHQCRCQESPEVQAGSGDSL", "length": 293 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSKDLAIGVIFILQCSMGILRHFILLSYYLMLHYNKHSLKPIDLILMNMFIANFLIIFPKSMLQTVEAFGIKLLFSVFVCKFLLYIERVGRSVSIATVCLLSVFQAITISPRNSCLYGLKVKVPKYISLSIFLCWALYFVVNMILPVYAYIKWSSNNMTYKRTLKYCFSVGHDEFTGSFFTILFVFPEVFLAILIVWSGSSMVVILYRHKQQVQHIYCNYASTRTSPESRATKSIVVLVSVFICFYSISSILYGCIALFCDNSWSLINIANIISLCFPVLGSFVVSHNPDFPRFSLSWIRNTRRV", "length": 306 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNDRMESKDLAVGVIFILQCSMGILRHFTLLSYYLMLHYNKHTLKPIDLILMNMFIANFLLIFSKSVLQTVEIFGMELFFNVFVCKFLLYIERVGRSVSVATVCLLSVFQAITISPRNSCLNGLKVKVPKYINLSIFFCWPLYFVINMILPVYGCIKWNSNNMTYKRSVKYCFSIGHDELTSSIFTILFVFPEVFLAILIVLSGSSMVVTLYRHKQQVQHIYCNYACTRTSPESRATKSIVVLVSVFICFYSVSSILYGCIALFCDDSWWLINIAHIISLCFPIFGSFLVSHNPALSRFSLSWIKNTRRV", "length": 311 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3F0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "LOC100911184", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDFWNLAIRIIFLSQIIIGILGNVSLLFYYLVLYYREFTLKSTELILMHLMVANIIIIFSAGVPQTMTIWGMKQFLNDFGCKLLLYIHAVGRSVSICTTCLLSVFQAMTIRPQKFCGNDHKVTMERYLGCFISFLWVLYFLVNFIFLVYTYIKKNSNNETRKRDFGYCSTVGSDKISDSLYATLVMCPEVFFSVLIAWSSGSMIVILYRHKQKVKYIYSTHVSRRDYPESRATQNILAQMFTFLAFYTLSSTLRGSIALLSNHSWWLMNINHFTSLCFPSFGPFVLMSHYSIVSRFILFWLRKNCSNFLL", "length": 310 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5JQC4-1", "protein_name": "Cancer/testis antigen 47A", "gene_name": "CT47A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEGLGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEGNEAANFDLAVVARRYPASGIHFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT", "length": 288 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5QNN9-1", "protein_name": "Trace amine associated receptor 12e", "gene_name": "taar12e", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMSLNETQTENILLCYPLLSNSCPKLHRLAVVQVGLYVFLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGLLVMPYSMVRSVEGCWYLGDVVCKVHSSLDMTFCISSLLHLGLISVDRYWAICDPLRYRLRVTNITVTVFIVFIWLFSFVYSFYVVFSGVNTVGLETFIMQVYCVGSCVLYFNKQWGLICPILVFFLPGAIMSSLYMKIFHVARKHAKVMSERVTGGLKSQSSAQRERKAAKILAIVMGVFLFCWLPFFTVNALDPFFNFFTPADIFDAVIWFAYLNSTCNPLIYGFFYPCFQKAFKILIFTYICGVRNLDTFA", "length": 337 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5QNP0-1", "protein_name": "Trace amine associated receptor 12g", "gene_name": "taar12g", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTSNESENIQLCYPLLSNSCPKLHRLAVVQVGLYICLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGSLVMPNSMVRSVEGCWYLGDVVCKVHSSLDMTLCISSLLHLGLISVDRYLAICDPLRYRIRVTNTTVTVFTVFIWLFSVVYSFYVKFSGITAVGLEMLILQTYCVGRCVVFFNKQWGLICPVLAFFLPGAIMSSLYMKIFHVARKQAKVISERVTGGLKSQSSAQRERKAAKTLAIVMGVFLFCWMPFFTLTALDPFFNFLSSADVFDALFWFAYLNSACNPLIYGFFYPCFQKAFKILIFTYICGVKKANTLTFE", "length": 336 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5R1F6-1", "protein_name": "T cell receptor alpha variable 5N-4", "gene_name": "Trav5d-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTYAPTLFMFLWLQLDGMSQGEQVEQLPSILRVQEGSSASINCTYENSASNYFPWYKQEPGENPKLIIDIRSNMERKQTQGLIVLLDKKAKRFSLHITDTQPGDSAMYFCAAS", "length": 114 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5RKI7-1", "protein_name": "Solute carrier family 7 member 13", "gene_name": "Slc7a13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAMDIEKKIYLKRQLGYFWGTNFLIINIIGAGIFVSPKGVLQYSSMNVGVSLCVWVFCAVLSMTSTLCAAEIGITFPYTVAHYYFLKRCFGPFVAFLRLWTSLFTGPGVLASQALLLAEYGIQPFYPSCSAPAVPKKCLALAMLWIVGILNSRGVKELSWLQTVSMVLKMGILSFISLSGLFLLVTGRKENVRRLQNAFDAEFPEVSRLIEAIFQGYFAFSGGGSFTYVAGELKEPSKTIPRCIFTALPLVTVVYLLANLSYLTVLSPQELLSSDAVALTWTDRVIPQLTWSVPFAISASLFSNLVTSVFETSRTSYIASRNGQLPLLCSTLNVHSSPFIAVLLDVSMGSIAIVLTNLIELINYLFFVFSIWTVLSVIGILKLRYQEPNLHRPYKVFSPFLFITAAISLSMVLIPLIKSPKMQYIYVFLFFLGGLLFYVPLIHFKLKLIWFQKLTCYLQLLFNICIPDVSDEHVAEEES", "length": 479 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5XHX8-1", "protein_name": "Sperm microtubule associated protein 2", "gene_name": "Spmap2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGELGEHRSRSSLLSIPVLDTKTSGGSEYRESDGSLDLQSTLFEDHWLQSSQATTERNTDDPEEEIPPEEMVGEELPEVSNLEDSLRRDLEVEVVGMSHLSINERTTPTTSSAKCRKKKNHRLLELAKPKFNWQCLKDRTGRCCKGHVWISPRKTNLQFCLYWPSVYWTERFIEDTTLTITVPEVSRRVEELSRPKRFYQEYYNNNRTTPIWPIPRSTLEYQASNRLKRLATPKIRNNIWSINMSEVSQVSRAAQMAVPTPRTLRLAKPRAPATLLEEWDPMPKPKPYVSDYNRLLQLATPKALSEKCVPDRSPQWEVLNVTKNAVASSRIISLAQPKIRKDLNEGYNPYYISPASLVAQASPRIYELAVPKHITKKV", "length": 378 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q63550-1", "protein_name": "BPI fold containing family A, member 2F", "gene_name": "Bpifa2f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFQLGSLVVLCGLLIGTSGSLFDIFQNPELDVESVWSEINYRIRYALETMDLDMLADYLSKRGIELKIKDLRILNLNHEVSPNGDEVTLKMPMALNASLSLPARDLTTDVSISMEAITSFAIEKDPKTGRRVLNMQRCSLNTDNTSISLLNRKSNFVNLALDSALYLIKRGLTLPVRRQLCPVLQLIISNTFHPDEISNPQTAIST", "length": 206 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q64583-1", "protein_name": "Cytochrome P450 2B15", "gene_name": "Cyp2b15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVLLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFINTYLLRMEKEKSNHHTEFHHQNLVISVLSLFFTGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVIGSHRLPTLDDRTKMPYTDAVIHEIQRFADLIPIGLPHRVTNDTMFLGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDVNGTLKKSEAFLPFSTGKRICLGEGIAQNELFIFFTAILQNFSLASPVAPEDIDLSPINSGISKIPSPYQIHFLSRCVG", "length": 495 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q66X01-1", "protein_name": "NACHT, LRR and PYD domains-containing protein 9C", "gene_name": "Nlrp9c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVDSSSYGLLQYFQKLSDEEFQRFKELLQKEQEKFKLKPLSWTKIKNTSKEDLVTQLYTHYPRQVWDMVLNLFLQVNRKDLSTMAQIERRDKQNKYKEFMKNLFQYIWTSETNTYMPDRSYNTIIDRQYKALLDIFDSESDPATAVVLGTRGKGKTVFLRKAMLDWASGVLLQNRFQYVFFFSVFSLNNTTELSLAELISSKLPECSETLDDILSNPKRILFVLDGFDYLKFDLELRTNLCNDWRKRLPTQNVLSSLLQKIMLPECSLLLELGESSCSKIIPLLQNPREIIMSGLSEQSIYFYCVSFFKIQLGVEVFKDLKKNEPLFTLCSNPSMLWMICSSLMWGHYSREEVISSSESTSAIHTIFIMSAFKSIFGLGSSKYKRFKLKTLCTLAVEGMWKQVYVFDSEDLRRNKISESDKTVWLKMKFLQIQGNNIMFYHSTLQWYFATLFYFLKQDKDTYHPVIGSLPQLLGEIYAHKQNQWTHAQTFFFGIATKHVITLLKPCFGNISFKTIRQEIIRYLKSLSQPECNEKLVHPKKLFFCLIENQEERFVSQVMNLFEEITVDISDSDDLGAAEYSLLRASKLKNLHLHIQKKVFSEIHDPEYGSLENFKLDQKFSAINWTMLSILFCNLHVLDLGSCHFNKKVIEVLCNSLSPTPNMPLTVFKLQRLLCSFMTNFGDGSLFCTFLQIPQLKYLNLYGTDLSNDVVEMLCSALKCSTCRVEELLLGKCDISSEACGIMATFLINSKVKHLSLVENPLKNKGVMFLCKMLKDPSCVLESLMLSYCCLTFIACGHLYEALLSNKHLSLLDLGSNFLEDIGVNLLCEALKYPNCTLKELWLPGCYLTSECCEEISAVLTCNKNLKTLKLGNNNIQDTGVKRLCEALCHPKCKVQCLGLDMCELSNDCCEDLALALITCNTLKSLNLDWNALHHSGLVMLCEALNHKKCKLNMLGLDKSSFSEESQTFLQAVEKKNNNLNVLHFPWVEDELKKRGVRLVWNSKN", "length": 1004 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q675C0-1", "protein_name": "Taste receptor type 2 member 102", "gene_name": "Tas2r102", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPVIYSFATLLIHVEFIFGNLSNGFIVLSNFWDWVIKRKLSTIDKILLTLAISRITLIWEIYTWFTSVYGPSSFAIGMKLQILYFTWILSSHFSLWFATALSIFYLLRIANCSWKIFLYLKWRLKQVIVGMLLASLVFLPGILTQRTLEERPYRYGGNTSEDSMETDFARFTELILFNLTIFSVIPFSLASISFLLLIFSLWKHLRKMQLSSRGHGDPSTKAHTNALRIMVSFLLLYSIYFLSLLLSWIAQKHHSKLVDIIGIITGLMYPSAHSFILILGNSKLMQTSLWILSHLRCRLKGENILNPSGNQVTSCYIFCIANKSVS", "length": 327 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q68FP3-1", "protein_name": "C-C motif chemokine 6", "gene_name": "Ccl6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRHSKTAISFFILVAVLGSQAGLIQDTVKEDRPFNPTIIHQGFQDSSDCCFSYASQIPCSRFIYYFPTSGGCTKPGIIFVTRKRKRVCANPSDQRVQTCISTLKLGPRSGNSAIA", "length": 115 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6EKJ0-1", "protein_name": "General transcription factor II-I repeat domain-containing protein 2B", "gene_name": "GTF2IRD2B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTERGCAFVNARTDFQKDFAKYCVAEGLCEVKPPCPVNGMQVHSGETEILRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLELSNVGKRKIDQEGRVFQEKWERAYFFVEVQNIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQYTERMRDEKLHELKKGLRKYLLGSSDTECPEQKQVFANPSPTQKSPVQPVEDLAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFLRVEKSLKKFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPESLCAQKLKMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGLNYIPKIAELKTEFQKRLSDFKLYESELTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT", "length": 949 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6NXT2-1", "protein_name": "Histone H3.3C", "gene_name": "H3-5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSTPSTCGVKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 135 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6P3W6-1", "protein_name": "NBPF family member NBPF10", "gene_name": "NBPF10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRSLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASRSLYEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEAEKVLESSAPREVQKAEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTLVVDRESSHDECQDALNILPVPGPTSSATNVSMVVSAGPLSSEKAEMNILEINEKLRPQLAEKKQQFRNLKEKCFLTQLSGFLANQQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHAQERELTQLKEKLREGRDASRSLNEHLQALLTPYEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGSYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSQDRCYSTPSGCLELTDSCQPYRSAFYILEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAFDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEENHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGYLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELCDSCQPYRSAFYVLEQQRVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDKIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNGVLMEVEEREVLQDSLDRCYSTPSMYFELPDSFQHYRSVFYSFEEQHISFALYVDNRFFTLTVTSLHLVFQMGVIFPQ", "length": 3795 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6UGQ3-1", "protein_name": "Secretoglobin family 2B member 2", "gene_name": "Scgb2b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLALLVTGELGFQRTEACIPFFGVYLGILSGNRIGLHTELAPFDPTVEEKEAFEKIQDCYEEEGLKAKTEDMKLMTTILFSSECRSYYTKEVLKNILVKFSKKLTHGS", "length": 114 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6YCH2-1", "protein_name": "TD and POZ domain-containing protein 4", "gene_name": "Tdpoz4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGELEAKSRGDTQSHEQKLCYRWTISNFSFFVEETEEYITSLVFSLEDNDKMTWCLRVYPTGVDEKNKDYVSLYLILLSCEKGSVWAKFEVCILNAKGEKCNTERIPSFSRIQPHQPFGFEKFITRDSFLSPAQVLTPDDKFTLLCKVSVLQDSFSISGQNPRPAIKVTRCTLENDVGELWENPLFTDCSLLVAGHEFRAHKAILAARSPVFRAMFEHEMEERLTNCVEIHDLDPQVFKEMMGFIYTGKVPHLHSHSMACDLLAAADRYGLEDLMVMCEDALCRSLSVENAAHTLIVADLHSTEHLKTQALDFIIVYASEVSKTSGWMSMVESHPRLVAEAFHSLASAQRVFWALPFKQLKWSLRPTQL", "length": 370 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6ZMA2-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNCTQSPGFILLGLSSDPEKWQLFFSIFLALYLLGFLGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKMLEALWTGDGSISFSGCLTQMCLFGVFADMDNLLLAVMAIDRYAAICQPLLYPLLMTPCRCGVLACGSWGIAHCASLVYTLLLSQLSFHSNQEIPHFFCDSRPLLWLSCSDTHLNEFLMMVLSALLGISALLCIVSSYGCIFCAVARVPSAKGRRKALATCSSHLSVVLLFYSTVFATYLKPPSTSHSSGEVVAAVMYTLITPTLNPFIYSLRNKDVKNSLKKLLNMEKPLD", "length": 309 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q70YC5-1", "protein_name": "Protein ZNF365", "gene_name": "ZNF365", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MQQKAFEESRYPWQESFENVAVCLPLRCPRCGDHTRFRSLSSLRAHLEFSHSYEERTLLTKCSLFPSLKDTDLVTSSELLKPGKLQSSGNVVKQKPSYVNLYSISHEHSKDRKPFEVVAERPVSYVQTYTAMDLHADSLDGTRSGPGLPTSDTKASFEAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQEVQRRERALNRQVDVAVEMIAVLRQRLTESEEELLRKEEEVVTFNHFLEAAAEKEVQGKARLQDFIENLLQRVELAEKQLEYYQSQQASGFVRDLSGHVLTDISSNRKPKCLSRGHPHSVCNHPDLKAHFHPKGRNHLKKAKDDRASMQPAKAIHEQAESSRDLCRPPKKGELLGFGRKGNIRPKMAKKKPTAIVNII", "length": 407 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q71LE2-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "Q7KR10-1", "protein_name": "Probable cytochrome P450 12d1 distal, mitochondrial", "gene_name": "Cyp12d1-d", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MNTLSSARSVAIYVGPVRSSRSASVLAHEQAKSSITEEHKTYDEIPRPNKFKFMRAFMPGGEFQNASITEYTSAMRKRYGDIYVMPGMFGRKDWVTTFNTKDIEMVFRNEGIWPRRDGLDSIVYFREHVRPDVYGEVQGLVASQNEAWGKLRSAINPIFMQPRGLRMYYEPLSNINNEFIERIKEIRDPKTLEVPEDFTDEISRLVFESLGLVAFDRQMGLIRKNRDNSDALTLFQTSRDIFRLTFKLDIQPSMWKIISTPTYRKMKRTLNDSLNVSQKMLKENQDALEKRRQAGEKINSNSMLERLMEIDPKVAVIMSLDILFAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYYPNGFGTMRTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFNRDASRPFKTMFLMEPAITFPFKFTDIEQ", "length": 521 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7M715-1", "protein_name": "Taste receptor type 2 member 117", "gene_name": "Tas2r117", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKHFWKILSVISQSTLSVILIVELVIGIIGNGFMVLVHCMDWVKKKKMSLVNQILTALSISRIFQLCLLFISLVINFSYTDLTTSSRMIQVMYNAWILANHFSIWIATCLTVLYFLKIANFSNSFFLYLKWRVEKVVSVTLLVSLLLLILNILLTNLETDMWTNEYQRNISCSFSSHYYAKCHRQVLRLHIIFLSVPVVLSLSTFLLLIFSLWTHHKRMQQHVQGGRDARTTAHFKALQTVIAFFLLYSIFILSVLIQIWKYELLKKNLFVVFCEVVYIAFPTFHSYILIVGDMKLRQACLPLCIIAAEIQTTLCRNFRSLKYFRLCCIF", "length": 330 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7M719-1", "protein_name": "Taste receptor type 2", "gene_name": "Tas2r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCAVLRSILTIIFILEFFIGNLGNGFIALVQCMDLRKRRTFPSADHFLTALAISRLALIWVLFLDSFLFIQSPLLMTRNTLRLIQTAWNISNHFSIWFATSLSIFYLFKIAIFSNYLFFYLKRRVKRVVLVILLLSMILLFFNIFLEIKHIDVWIYGTKRNITNGLSSNSFSEFSRLILIPSLMFTLVPFGVSLIAFLLLIFSLMKHVRKMQYYTKGCKDVRTMAHTTALQTVVAFLLLYTTFFLSLVVEVSTLEMDESLMLLFAKVTIMIFPSIHSCIFILKHNKLRQDLLSVLKWLQYWCKREKTLDS", "length": 310 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7RTZ2-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 1", "gene_name": "USP17L1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHCKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEVQWYKMDDAEVTVCSIISVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q7TMR7-1", "protein_name": "Monocarboxylate transporter 7", "gene_name": "Slc16a6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTQKNSKLCSRANVYTQVPDGGWGWVVAASFFFIEVFTYGVIKSFGVFFNDLMDSFDESNSKISWIISICVFIMTFTAPLSTILTNRFGHRLVVMGGGLLISVGMIAASFSQRVYQMYISIGIVSGLGYCFSFLPTVTILSQYFDKRRSMVTAVASTGECFAMFAFAPAITALKEHIGWRYSLLFVGLLQLNVMVCGALLRPIIIKGPGSPKAIPLEPRREVQYMLENEKTRTSIDSIDSGVELTTSPKNVPSEAKREQEVRVEQQQTLVVGPKHSQKRAPLLDFSILKDRSFICYTLFGLFATLGFFAPSLYIIPLGISLGIHPDRAAFLLSTMAIAEVFGRIGMGLVLNREPIRKIYIELICVILLTVSLFAFTFATEFWGLMLCSVFFGSMVGTIGGTHIPLLAEDDVVGIEKMSSAAGVYVFIQSISGLAGPPLAGLLVDQSKIYSRAFYSCAAGMALAAVCLALVRPCKKGLCQNPHSGENQTDGHRGKALQDIPEDFLEMDLGKCEPRAHMKMDPV", "length": 522 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TN50-1", "protein_name": "Mas-related G protein-coupled receptor member B8", "gene_name": "Mrgprb8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQNSIP", "length": 328 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TPX8-1", "protein_name": "Oogenesin-2", "gene_name": "Oog2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNFYSPPTLMELARQCLLRDEYLAISALKDLPNMMFPVMFKEAFIDGHTKILTAMIPVWPFPYLSVGTMLKNLNLDTLKAVLEEIDILISKPVFSSRCKLREITLSHDLVVVWAGSHEVEGLPEFMEQEKPVENSPGYGTKNKLKVTTELQFMEGHLDECSTYLLQWAYQREDSIHLHCRKLKIYGLTKAAVIEMFKIVHAEYIEDLELSCLCLEYLDFLNPYLKQMSNLLSLTLDEIIYTLNIDDYRNLNEEKVITVISHLPTFHHLQELYVHGVIFIECLRCLKKPLEVLSFTDCDLSQSDLDYLPYCLNIFELRSLHLTDVRLSNLLLEPLGFLLERVRHTLKSLQLMSCEMGETHFNALLPALSQCYQLTVVNFYGNELSLLFLKKLLHHTAKLSQLADELYPAPQECYDNRDVVLSHRLENFCSELLDILRAIREPKKVTFGTIKCSKCGGSYVYDLETQCCFFEKNPPWA", "length": 476 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TQY5-1", "protein_name": "Olfactory receptor", "gene_name": "Or4k38", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEDSNRTVSSEFIFQGLCSSRQLEIFLLLPFSILYLMAVVGNLFVVILIIIDHHLHSPMYFLLANLSFIDFCLSSVTTPKLTIDLLKENKTISFVGYMRQIVCVHFFAGGEMVLLVTMAYDRYVAICRPLHYSSIMDRQKCIWLVVISWIVGFVHAISQMLLILDLPFCGPRVIDSFFCDIPLVMKLACMNTDTLEILINADSGILATTCFILLLISYTYILLTVQHRSKDGSSKALSTCTSHIIVVLLFFGPIIFIYLWPVSITWVDKFLAVFYSVITPLLNPAIYTLRNKDIKNAIKKLISHK", "length": 305 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TR72-1", "protein_name": "Olfactory receptor", "gene_name": "Or8k25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKYNLTIVTEFILVGITNHHEFQVPLFGLYLIIYLTSLVDNLGMIILTIVDSRLQTPMYFFLRHLATTDLGYSTAVGPKMLRNFLVDQNIISFYACAIQSSFFGMFIVCEFFILSAMSYDRYVAICKPLLYTVIMSQKACWILVTIPYLYSIIVSLLVNIKIFTLSFCGYNVISHFYCDALPLLTLACSNTHEIEAIILIFSAFNLLSSLLIVIGSYLLILMAILRINSAEGKWKAFSTCGSHLTVVIVFYGTLIFMYLQPTFTHSIDTGKVISIFYTQVIPMLNPLTYSLRNKDVKDVLKKPMEKVHNLFS", "length": 313 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TSF0-1", "protein_name": "Desmoglein-1-gamma", "gene_name": "Dsg1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWHSFRIAALLLTSLVVLEVNSEFQIQVRDHNAKNGTIKWHSIRRQKREWIKFAAACREGEDNSKRNPIAKIHSDCAANQPVTYRISGVGIDQPPYGIFIINQKTGEINITSIVDREVTPFFIIYCRALNAQGQDLENPLELRVRVMDINDNPPVFSMTTFLGQIEENSNANTLVMKLNATDADEPNNLNSMIAFKIIRQEPSDSPMFTINRKTGEIRTMNNFLDREQYSQYSLVVRGSDRDGGADGMSAESECSITILDVNDNIPYLEQSSYDITIEENTLHSQLLQIRVIDLDEEFSDNWKAIIFFISGNEGNWFEIEMNERTNVGTLKVVKPLDYEAVKNLQLCIGVRNVAEFHQSIISQYRLTVTLITVTVLNVVKGCVFQPGSKTFIVDSRMEANHTVGEFLATDCETGQATNKFKNVRYRYVMGNNPENLLVVDSGIITLRNRVTMEQYERLNKRYEGTVLSIHDSLQRTCTGTIIMVLCGFWTTTEHPTTSTEKPVTLSITPNVDNVHFGPAGIGLLIMGFLVLGLVPFLLISCDCGGAPGGGAGFEPVPECSDGAIHTWAVEGPQPGGITTICVPQMPPGNANVIEYIDNSGVYTNEYCGREMQDLGGGERTTGFELMDGVKTSAAPEICQEYSGTLRRNSMRECRDGGLNMNFMESYFCQKAYAYADEDEGRPSNDCLLIYDIEGVGSPAGSVGCCSFIEDLDESFLDTLGPKFKKLADISLGKEIDSYPDPDPSWPPQSTEPICPQHMEQLASGHPSISPHFGKTTVISENAYPSGPGVQHPMLIPDPLGYGNITVRESYTTSGTLKPSVHFHDNQQASNVVVTERVVGPISGADLHGMLEIPALRDGTNVIVTERVIAPGSSLPNSLTIPNPRETSNVVVTERVIQPTSGMIGNLSIPP", "length": 911 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q803M0-1", "protein_name": "Protein phosphatase 1 regulatory subunit 3B", "gene_name": "ppp1r3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPIELAMSLYLSSDEFLNPRASKYSRPLQPCLNQCKSSKLSFSSLKEQSEFNGVSRALMIPGRAKKHVSFADHKGLALTVVKIFSEFDDPIDIPDNIDNFFTSSLTVSEGKDKLTLDFDQPSADYLKFRQRIENDHVCLEHCMLKEKSIMGTVKVKNISFEKSVKLRITFNTWKNHTDVECQYVKDTYTGSNRDTFSFEASLPEQVPSHERIEFAICYEVNGDTLWDNNQGKNYRIIQSALRKSSNESNGGHQQYSQSDWDIHFDRYGSPRCSRGIFPHWPSYVGYEDIGPYY", "length": 293 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q80SW5-1", "protein_name": "Embryonic testis differentiation protein", "gene_name": "Etd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDEKNPEAVPRPPEQNTELVPPKKSKSKKPANILIYLIDRHLGRPRNDMDLFEWVWTLK", "length": 59 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VJ6-1", "protein_name": "Zinc finger and SCAN domain containing protein 4C", "gene_name": "Zscan4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSENDPREVPGLQSRQEQPISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VT8-1", "protein_name": "S100 calcium-binding protein, ventral prostate", "gene_name": "S100vp", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSTEQEIMELLMILQEFSVKKIDKLDVQEVKRLFREELPNFLKAMDEATKNKILNDKGKEMPFDEIWDMIGRMALEYRKKNSNALKD", "length": 92 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q80XZ1-1", "protein_name": "Polypyrimidine tract-binding protein", "gene_name": "Smptb", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRNSPPAAEGNGSKRFKGDSWGTRDPSRLVHILRLPSCVTEGEILCLALPFGEVSNLLFLRAKNQAFVEMSTEESANTMINYYTWMPPVLRGQPVHIQFAHYRELKVSSSPSQEISLSQAGDSREATASSLVAVPGQAAASGQTAVPSQLGAQPCLPPEDSYQAGTVALAPPASAVDTELVVAWQSPVLRILVENYFYRVTLEVLHQIFSRFGTVLKIITCTKNNRFQALLQYAHVMSAERAKLFLDGQNIYDACCTLRISFSGLTNLMVKYNNDKSRDYMRPDLPSDDSQPSPVQVQNMASALPAPAMSSASPYASIALPHTFAIPQAAGLANPEVFKTLHPQAIQEVAMASSSSSSSTAAAAVGAAEIAAAAVPGAEGSMVTSGSPGVGSPVLLVANLNQEKVTPRSLFILFGAYGDVHRVKILFNRKENALVQMADGSQAELALRHLNGHKLYGKALCILLSKHQSVKLPREGKEDQGLTKDYANSPLHRFKKPGSKNFQNIFPPSATLHLSNLPSLVSEEELKNLFSSNGYAVKAFRFFPKNHKMALIRMGSTEEAIQALVDLHGHLLGQNHHMRVSFSRMTI", "length": 588 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q810J1-1", "protein_name": "Pregnancy-specific glycoprotein 22", "gene_name": "Psg22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVSSELLSNGWTSWQRVLLTASLLTCWLLPITAGVTIESVPPKLVEGENVLLRVDNLPENLRVFVWYRGVTDMSLGIALYSLDYSTSVTGPKHSGRETLYRNGSLWIQNVTREDTGYYTLQTISKNGKVVSNTSIFLQVNSSLFICGRPSPPALLTIESVPASVAEGGSVLLLVHSLPDNLQSLLWYKGLTVFNKVEIARHRTVKNSSEMGPAYSGREIVYSNGSLLLQNVTWEDTGFYTLQIVNRYWKMELAHIYLQVDTSLSSCCDDFNSVQLRINPVPPHAAEGERVLLQVHNLPEDVQTFLWYKGVYSTQSFKITEYSIVTESLINGYAHSGREILFINGSLLLQDVTEKDSGFYTLVTIDSNVKVETAHVQVNVNKLVTQPVMRVTDSTVRIQGSVVFTCFSDNTGVSIRWLFNNQNLQLTERMTLSPSKCQLRIHTVRKEDAGEYQCEAFNPVSSKTSLPVRLTVMNE", "length": 475 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q863C3-1", "protein_name": "Gastrin-releasing peptide", "gene_name": "GRP", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRGREVPLVLLALVLCLAPRGWAAPVTAGRGGALAKMYTRGNHWAVGHLMGKKSVAESPQLHEEESLKEQLREYAQWEEATRNLLSLLQAKGARGHQMPPWEPLSIHQPAWDSEDVSNFKDTGPQHEGRNPQLN", "length": 134 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q869X2-1", "protein_name": "Probable polyketide synthase 17", "gene_name": "pks17", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTFNNIKDENNDDIAIIGMGFRFPGGGNNPYQFWNQLSNKMDGISKIPTEKWSRSFYEQKYINNEYGGVLKDEEWKNFDPLFFGISPKEAPIIDPQQRLLMTTLWEAFEDANIKPSTFRGSDTAVFIGMMNTDYQRCQFRDISYVNPYITPGTAGSFISNRLSFSFDLRGPSMTLDTACSSSLNAVYLGCQAIANGDSKMAIVGGVNGIFDPCFSMTFSGLNMLGHKGQCRSFDAGADGYIRSEGGGVCILKKYSDAIKDGDRIYCVIKGGSSNVDGYNAKTNIIQPSMKAQGENIEIALKKSGVNPSDIYYIEAHGTGTPVGDPIEIEAISRIFKDNHTPDAPLYIGSVKSNIGHLESAAGIASLIKVALSLKNRSLVPNIHFEKPNPLIKFEDWNIRVVTDEIQFPINKLINMGINCFGLSGSNCHMILSEAPINYDELLKTTNNNSTSSSSNDDKKEYLIPFSANCNISLDKYIEKLISNQSIYKDTILFKDFVKHQTISKSNLIKRKVITASDWDDFLNKRNETTSTSSLTSTISAPASSTPVIYVFTGQGPQWRDMGKALYETESVFKDAIDHCDKLLANYFGYSILQKLLSLESEDSPEIHHPILAQPSIFLIQVGLVALYKSFGISPSIVVGHSFGEIPSALFSDVISLETAVKIVYYRGLAQNLTMGTGRLLSIGIGADAYLEKCALLYPEIEIACYNDPNSIVITGSEQDLLGAKSTLSAEGVFCAFLGTPCSFHSSKQEMIKEKIFKDLSDLPESNVPCVPFFSTITGSQLSHKGFYNVQYIYDNLRMPVEFTKAISNIFNFIEENESYKNAIFLEIGPHPTLGFYIPKCKPSNSTITSKPIIVSPLHKKKEELTQFKLAISTLYCNGVEIDFASGQQLLPTSSSSGGGDISSFKESTNKLPRYQWDFEEYWDEPNQSKMVKRGPSNNLLGHDQFAGNTLMELFIDIDKSAHQYLKGHKIKGKYLFPGSGYIDNILRQFNGQDITIFNLEFSNPFFLKDGVQHHLQTSITPTTKGEFKVEFFIKDNRNSTKWTKTSNGRIGLFKHNPKNNKLDIEKLKSQCSFTTLTKSEVYNKLLLLSLPYGPTFQRVESCSIGDGCSFFKLSMSPCSEFDKDFLNPSIIDCAFHGLLVLSEGPQEIVFDRLQDMKFYSSNVPSTRPQFIYAFAKFDKIEGNSTHGSLNIILEDGTLLISIKNVKCTSLIRLKKQSIKYPSQNVYSHHWQSKDSPLTLIENQLIEEKSSESKINFEKLLNDKLFNYYLIRLLNQSIKSEFIEFDYKTSTVDTLDIGSKNAKLLEKIQSILNPIDSLDQSIDITSLKQAIIVKSSFKNEIKLVEKSIKRIVSLLKGGESEHFSPSNPSSPNDTPRNNSNNCSSKNNAASSDDADDDTNNEETINQLNNEPFNFSNSQFISNQNQLISKTIVNSFDRLINSIEIGEKKLIKIIDLSSIYQNYQLSKLLLLQLNQLLINLSNNNNIEIEYTIPSNTKNIDSITEETKSISNVLNIKYRSFDLQDDLESNGYLNSNYDLIITSLLLVSTNSIDSNEVLSKLYKLLLPKGQLILMEPPKGVLSFNLLFANDFKQSLEIKSEQEIKSLIIYCGFTKIETNLNTKDDEEQQQPPPPSILIVQAEKRDIESMSLTFSSDPKSLNSSYSNCIFIVSKEQKENPTSYIQEYFDITEFFCQNATIIEADDSELLTKTIESGVGKNDIIFFLVSLEELTIENYKQVTMQYTLVNQILLRNNLSTRFALLTYDSQNGGKNYLGSSLIGTFRYFLEFRSLNIFSIDVDKDSIDNLTLFLRLVDLSTIGDRETIVRNNKIFVQKIFKEPKLLSPSNNYEKNTNNLFLYSNSNLDFSFQSKEKLLHGCVEIKVMSTGINYKDSLFYRGLLPQEVFSKGDIYSPPFGLECAGYITRVAPSGVTRFKVGDQVVGFASHSLSSHVTTHQNKIVLKPENISFNEAAAVCVVYATSYYSIFHIGAFIADKESILVHSATGGVGLASLNLLKWKRNQLKKHGNSEISNDASIYATVGSKEKIDYLQEKYGDLITAIYNSRDTEYCDEIKQQSAQGGVDLILNTLSGDYLSSNFRSLSQVGRIMDLSVTQLVENDSLDFSNFKYHVGYNTIDLDRATKYNSKIIRDILTEVFDAISDGSLENIPVKVFPAIQVKTAIEYINERVHIGKIVVDFENFEQDILKPALQEKENPIQLNKVKKLEHTCDTLNNTILITGQTGIAVHILKWIISGSVLNSNKSQQQVTDFIILSRSSLKWELENLINQTKHKYGDRFRFHYKSVNIADLNSTRTAIDQVYSSCKNVSPIKSVLHFATVYEYILPENITQTVIDNTHNPKAVGAINLHNLSIEKDWKLENFILFSSIGAIIGGSKQCAYSSANLVLDSLSNYRKSIGLASTSINWGGLDAGGVAATDKSVASFLEGQGILLVSLSKILGCLDSVFQPSNSHLSNFMLSSFNIDNLLSSAPQMKRKMDHHLTNYKTSSASSDDSLGDSGSTQAKVISTISELLSIHPSKLNLDTRLKDYGIDSLLTVQLKNWIDKEFTKNLFTHLQLSSSSINSIIQRISSKSTSTSTPNPTNTSKQTATKKT", "length": 2604 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q869Z5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSHLTPKPNVLNVYGAGTPNFVKVQILLEEKNIPHVYHKIDFSKNEQFDPEFLKFSPNNKIPAIVDNTVEPNGISVFESAAILMYLSEKHQFTDLYADFKTDPALHAKHLEFLFFQMSGVGPMTGQLGWFLRQPEPKNTQAIERYSEEVKRLYRVLDKILSTNTWVAGEQYSIADISLLGWALYFLKGYYDDHITREQFPNVYRWLDLAAKRPAIIKVLETIQPKQK", "length": 227 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AE3-1", "protein_name": "Probable polyketide synthase 9/36", "gene_name": "pks9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLKNINLKEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFKEWKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHTNKHQDSVLKNAIAQSTSAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVDIIKAYSILSMLSKTHGKCKTFDESGDGFTRGECVGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNFLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTTMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNEIVFIEIAPHPTLLFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQSINLPLYQWDEELYFTQAQTLEQHRKEGPPIDHLGTSNSYNSPFNNSYRTSIDIKNKPFLYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPPKYNIKEIIENKCNLSKLTKNELYTHIKSKTGLNYTGVFQGVTECYIGGDCTLSVVSLESQTNSFLNIPILDTCLHGMIGLSNDQCQIVFDKAIGFKYYSSNIPANLKDYKDSVYVYSHLKSKSVDSFFGSIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNEVIIKSSRIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCRYLRKKNQMISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIIALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGFNVIYRPLKIDESLIETQSINPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCSMSQQSWCQLLKTCNFKDIAMSKECIFVGIVIHAQKPPISLLNSQPKRDNIIIYGGGNPIFVENIKLYSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNFKQITLEYIEINRKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLNTLDFDYDSTQNYINSNNKDMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNYKKIQIKPSNLSHNEASSIPIDYLTSFMSLFNIGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFNSNLFVTVNSYETKRYLQDNYGDFITGIYSNTDKSYVTEINKKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLAKYGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFELSLIQKNKIHKCLYEISNAFENGELKTIPIKEFTNLNIKDAIKYITNNKIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILVTGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINETKLSNNNIKFHFKSVDIGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYVCANALLDSFSKYRESLGLPSTCICLGAIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNAGKFTNSMLSNFKPSKFKNNQQTSLFLKFDYLMNLKNNSEETKIENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTISTSMKMILNSLMKNNQNIDDNNKDLPSNRIDYWKNEMKFEESIKPISNEIQSRNNSEKIILLTGTTGFLGGFLLFNMVRLDSCKLIYCLIRNKSKSNNPLDEIINNLKYHQLYEKLNQSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKKYNIPSILIRPPSIFLNPETGIGHISDFSLLSIQSCYELGYYPNQFENDFILINTITWLSNNITNIIMNDNCWTDSKMNIYNVHGKQIQSSLIIKPLEKHFNCKHINTNDWIDMVNNSNKKSCIKLKSFHSLDIILKSENNRYKPNENQSISLSTKSLLESMGSYNTDLEITDKMIISHINQIFNLNETI", "length": 2931 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AF8-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFSKFSIKENKPKKVKSNSSKGFNNNEINSTNNNNNNNNNNNNNNNDSDNFINNNDSNNNNNFNNNNNNNSNNINNKTEDSNDISLLINQFIGSSPAPSTCSGSDKFSIKPKKIVTPSKRKNSTSGSDIIDFNNCNNNNNSKSNSDSNNNKYNNSNSNNNSCNNTNNGNERKMKGYDYGNNNSNNNYSSSSRDYNSNNNSSPRDYNNNNNNNNNNNNNNNNNSNNNSPRDYNNSRDYNNNNTNNNSSPRDSNSNNNRNSSSRDFSNNNSSPRDYNNSRNSNNSFLNNNNNNNNNSNNSNDNSPRDYNYSSSNSSPRDYNNNNDTFSKKRNNVGNSILEIKSNPTSPRIKPIMVWPRSSPRIVNKLPPVQSLVDLTEIEMIDDNNNNNNNNNNNNNNNNNNNNNNNSNNNNNKSGSNNNFSDSDSDKDNYNNNNNTNNNSFNSDSDNYNNSNNNNSNSNSNSNSNSNSNSNNNNNNNNNSNNNNNNNNNNNSNNSNKSNNNFSNIKILEKRRKSINEISDNLTTRNIEEIDSKMAHEFEHPFLEKLIFAGQRPPFVECDDYFLKRYKNQFQYYLDISMKSIINTRDIGEGDDDDEINSVPFKCTLCSYEYDEENNNENTNGFIDEADKIYNRSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNSNNNNNNNFYDKKYFKNNYFQHLLSKHLNQIKAKGIQDTNVYNDEANIPLGSKKCDHLECSEIILKNEFTKHIKKLHHHHKDEDIDICPRCKILKKSIQKRIVKFSKKKQEKDDDNNSKPVSNKVATISHNPSPNNIDKDINNNNNNKNNKNNTNNLENDNNDNSSNNNYLENEEEPEIVFQDIKPNNNNNNNNNNNNNDDNNNDNNDNNDNENNNDNNNDNENSNNNNNNS", "length": 901 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86BK9-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 22", "gene_name": "Dmel\\CG32971", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSDSKDEALLKSFKTQLKDNVLSMLLNFEELLKLVSPRTPGQITNDTEQELNAFEMQVRAGNFVRAGEALIKLVHDVKEYQIIYDYSNIEEEMDRQSEAMHAKVTEYDQTLIKMVKDLEEELSELEYEYYEKSGGPDLDSKDLLV", "length": 145 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q86IJ5-1", "protein_name": "Uncharacterized protein DDB_G0272718", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPPHGHHHHHHGHHGHHEHITITPVYAPPQVVQPIYAPPPVVQPVYVQPPVVYPQATIVLETGHHHGHHHHHGHHGHHDHHHHGHHGHH", "length": 89 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86IV6-1", "protein_name": "DNA replication ATP-dependent helicase/nuclease DNA2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNFFEKKNNNNNNSSNNNNNNNNNKNNNNKNLDKNNSSDRNNNNNGDKNNLKPTQKSLIDLWFQVDDEDEEYELSSLSNDGGSSFNSFKVNNRDTSIGSDIYSKTITPSSLALSTSSLISSTLTPPTQSPPFSKKNEKTSSFLNSPSSQKSKSNNSNVKEKLSPQYSSSSQLSDFFKKKKRPLLDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTISSLNTNSNNNSSGSSNGSSSSSSGGGNKSSNNKKQKVSQSTSSTSLKEKQSQQSILSYLNPTPSLPTPIFDKPIERSDSNLATSSFSKLNFDDIPLDDEELSQKINTPSPKLILKNTFSSTPTQKSPSLSSTPPNKIKITDKKLPNSSSSSSSPPPSSAKSKLSHRSQSSPLSPLITNLNQNKSNEFDDINFNFNIPSPLKEINNKPNIKSNSKETLTPLTQIFHSSSPPPSIIIESSPSVCFSPTPTKNQSPTLSNLSPTFSFLSDTSPVKSPSQLFEFTFDDPLSPKLISSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNTFISKNNLINLFNEQSNQENVSTTTTTTTTTTTSTSTNNNNNNRYERVLIINVFYEVTQIFNNSNDKIHKKTLSGFSESIGESREIQLLDEWIYTPVRPGDIVNVIGEFDDNGEIIINNIQNLLILHPDILITGTELGGSLTCTRRSVLKEQIRVGNSNSSTVPIFGSIVHEIFQECLKNNRFHLDDINTFKQEIIGKSTFQLGLSSLGETQDTALNHLENWLPTIDKFAKTFILPSSSSSSASSLKKNLIEINSEKWHLSISKILEIEENIWSLMYGLKGKIDSSLEIKLVKQQQDEKQSKQSKQSKKKKQQTTSPNNNNNNNNNNNNNNNNNNNNNNNNNNGPTTCYLNVPFEIKTGKPYQIPYISHSSQVLIYTLLMNDRYDQDIEMGILYYLKSQEFKSVGLNYGLLHPILFERNQIRSLIVSRNLLAYFLNLNSQPLLKPNPILPEMLRDYHSCTKCYSIDPCVLYHKAIENGDQFTSSLGDLFLEKTNHLSSIHINYLKNWNKIISLEYSIKNNKRKLIWNKSRKFGEKNNSCIGELILISEEYSEITETFSYRFRVNPDKLLNSSISEGDYLLISVEDKYYGMGSGQLSNIINDIITITCREKLSEPPSLLSDYTTPNCNNNDPSYFGNYRNKPLIYIEYEDADQQQQQQQQQQQQQQQQQQQQQQQSQKQQKQKQPNFTQLRGLNNYVNNSKLTPFKWRVDIDEQLSGLSIVKSNLFNLFLKENQKLRSLIVDLEAPIFDKLEQENYWKSIDFQNDYPLLNIDQRNAIIKTLSAKDYSLIHGMPGTGKTTLVISLIHILWRLGKKVLITSFTHTSLDHLLLKFNKQYPNIEMLRVASSLNQIDPSLHRFTLEKQSFGNITQSKQYLERQQLVATSCLGINHQCLLKMQFDYCIIDEASILSQPISMGPILKCKSFVLVGDHHQLPPIVNNKEAGKLGLDISLFKQLSTSHPSSVSNLYHQYRMCNSIMSLSNHLIYNNRLVCGNQSISNLSLQTNYYHNNNNTTHIDLLDHINNWPQIICNPNSSVIFVNTDQLNNSTESSNGDLFYNQTEANIVAILTNCLINKLNINQSQIGIITPIRFQLNFIKKSILKYLSIENNNNNNNNNNNSNNNNNNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNQNNNQNYLKKIENLDILTIDKFQGKDKDCIIISFVRSNEKKEIGELIKDWKRMNVAFTRAKKKLIFVGSKSSLSKFPFFLDFFEFLDSKNWIYNLNNKIQF", "length": 1838 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86JI5-1", "protein_name": "Probable polyketide synthase 5", "gene_name": "pks5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDMKLNDIENENFINQMKGVAIVGIGFRIPSGNSENSISSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSDAHHIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHANKHPDLILKNAIGFSPSTLSNRISYCFDIHGPSLSIDTACSSSMNAVTQGYHSILNGTSNMSIVGGVNFVIDVETIKGFSYLNMLSKTHGKCKAFDESGDGFTRGECAGVVVLKKLDDAIRDGNRIYCIINGISSNIDGNGIADKANFYSPSKQSQFNNINLAFKSTNGKISVNDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVVSLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRNNEKSVSMMINNFGVTGSNCCLLISEFKKQDYESYENNIGSINKNILVPFSANSPKSLDQYQSKIKNIINNQFNFIDFANNQIYSKSNYLYQRSVVIANNSNDLVNKILNKKHIQTKNPIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGYSVLEKLRSIGDDDTTSIHDPTIAQPAMCMFSVSLFELYKHWGVNPSFILGHSLGEIPTSYCSGMIDLDTFCYTVYQRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESKKSKVPTFSTVTTNLFNESDPFNSQYVYDNIINPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQKINLPLYQWDDELYFAQTQVLEQHRKEGPPIDHLGLSNSYYSPFKNSYRTFIDIKNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHTIEMPPKYNIEEIIKNKCTLARLTKNEIYTHIKSKTGLNYTAMFQGATECYIGVDCTLSVVSIESQTNSFLNIPILDSVFHGNISLINDQCQIVFDKVHGLKYYSSNIPNDYKDKSVYVYAKLKSKTSDSYSASFTVLLSDGTVVYEIDEAFSKSLIPIKELLKIEYPNDELFSINLQPKDSPIPAPSTFKSLIYENDRFNAEPPMVENLFQYISTIFYKNIINRCPEINIDIIKSLSIDEIISNFSKISKHERLFKYVFETIKENGILNSLEEKDDTYFVFNEVLIKSSRVISKLLFPLENDNDNEDTPQLLFQNGLMDKVYKCRYLKNKNQMIAHIIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIVDTKNKINKIIKGAGITNGLNVIYHPLTIDESLVELQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLIPNGQLLFVEPPYKSIICDSLFGSFEQWWAFTDTDIRKDHCCLSQDGWYKLLKWSNFESIEMSTESKFMGSVIQAQKPSFTSLINQQPKYDNIIIFGNNCPNFIDNIKPFSNFNEFIQIETIQEFDQLINKSTITNDSIIYFIKSINQLSLDNYKQATLEYIEINQKLLQINSLCKHVLIVNDSRKTNYLASSIVGAARYFDEFQQLKLHTLDFDYDSTQNYLISKNNKMVQFINNLIDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFEQQDNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINNKDYLVYSGLEGSVNSNTPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSNIIVNHERIQIKPSNISHIEAASIPIDYLTSFMSLFNVGCLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVNSDEIKQYLLNNYGDLITAIYSNTDKGYVSQIKNKLIEQGSNDNGVDLILNTLPSDFMDSNFQLLAINGRIIDLSNDHLNQSEYMKNVNFTLNRGYHNFDLMSQRNSRINRSLLTISKAIENGELKLIPIKEFSNSDINDAIEFIIEENRIDKIVVSHDHEVYQELYAKFSNENDFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQEIINIHSIFHFAFTQIACKVQEINMKHLDISHGAKTMGAINLHNQSIKRNWKLINFVISSSIASLVGSTDQCSYVCANALLDSFSKYRVSLGLPSTSINLGAIESTGFVSKNESISVFLDGSGIIPTPINQVLGLLDLQIQNPGKFTNSMVAKFNPLNFSNNEQINLLLKMDYIFNLHSNGYTKVKESAGSKNVDELFIKKISDLFSIDESKINKDIRLIDYGADSLVIVQLKNWVDQEIGFNLITIQQLQNNTINVSIKIILNFLKKINK", "length": 2512 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KS1-1", "protein_name": "DNA cross-link repair 1 protein", "gene_name": "dclre1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDDEDDINLYITRSKNNENKKTNKNRLIDNNIQKTKTTTAVLTTRTTTTTTTTTASTQLKWDYGDEDDDDYSAPKDIDEEQSSKQFNYQNNQIVVKQDHDDYSAPKDMDEEQSSRQFNYQNDQTLVKQDDDHDDYNEPKDIDSQSLIDEDCDFEFDNSDFFFDDGTTNNNDNNNKNNKNNNNNNNNNNNNNNYNNNNNKNYKRKYYQSYNNSNNINNNNNNNNDKFEKRLSDLKKTGKEEAKKRGYQVRKTPTKEKKIPPSFKVIDGTNFLVDGFQYKSEDFTHYFLTHFHSDHYVGITKTWSFGNIYCTEETGKLVSHKLGVDQRYIVKCEWNKLIEIQGVKVAFLDSNHCPGSALILFIIPLRNKDGEIIGEESILHTGDFRYNQSMNNYPLLKGRTISKLYLDNTYCDPQYVFPPQPEIIKQVASIVRKENDGETLFLFGTYVIGKERILLEIAKQEGKPVHVSNEKYAILCCLSTCLDINKFTTNELITPFRAVTMSMLSYHNMLSLLDSSNNKYKRVIGFRPTGWTQAKKSITYLNRGPTTFYSVAYSEHSSFNELRDCIDHFRPTQIIPTVDCDSPIKVKNILAHFSDLYEKKKQLTIASFFSAQPVTNFFQSFFKSKSEPIIDEDNKKLIPITTTTTTNINTLTATDTTTTKIKTSNTLIKDEFTDDLIWDCSDDLISDRKLLTQSDNSSALCKIEKEENFNDLSENNNNSNNNNNNNNNNNNNNNNNNNNNNNNNKLIIENDIKEEIIDFDDPVFISQQKWIEKQIYNNNNNSNNNNFTTPTKTNGNLSNNAKLNLTPTQTQTQTPTQNNKKQKTTNVSPTSYNSNNSSQQSGLKRSKSDPNVKKNQLQTSQPPSQSLITSFFQKCASPTSLFSATPPTPSITTTSNQSTKNKNSTTTTSTSTSNNKPFKN", "length": 920 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KX6-1", "protein_name": "TNF receptor-associated factor family protein DDB_G0272348", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFELEDITIEQSSFTNNNSNNNNNNNNNSNSNNNNNNNNNNINNNNNHNNNNKNNSNNKNEINNQLDIPISNLVVDKENISKKYFCTICSDLLVNSFHADKFKAVQCKNGHYTTCLNCWEKHLEKKKNCIQCGVDVESIESLSSNLLVTQKFTTFKIHCPNSFFDTIDFIKDEVNGCKEIIQINELEEHLKECQYGFISCKNCEEFSKLPFQEFTQCPDFRKNTKEQHDLICPYVKISCEYCGDIINKINKESHNANWCQEITIKCLDCHLPFKKKEINQHQKSFCPETIIQCRYSKGGCNAMIRRSKLSQHLTEGDNHHQFISNILNQQDLKINELELKNTEFCLLLNGQNKKITELEILFKELNDSILIQKQQQKQQQQQQQQQQQQQQQQQQQQQSQQQQSQQQQQSQQQQQSQQSQQNNNSNSHFINNNNNNINNVQMSDSPNGGSLPQAVYKNKWVISNYSEQEQQGISKDYIKSPLFKIGNSTFFLKWFPFGKKKLNYCSIFLYKTQDDKSIIVNYYIHLVNNQISDEVYEKRGCQKYDSENGSAGYGSSQFIKRADLLNDANGFLINDSITIEIEIFATEEILPLQS", "length": 595 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8BI41-1", "protein_name": "Syncytin-B", "gene_name": "Synb", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTGFWVLCFVLFPSSLSYPESWMPLVNLTHHILRDTNSSLFSNCWVCLSTQTQRSLAVPAPLSIWTDTPMKLHLTYSVRPFSGSFSISDIERRLRLFRPLTASYSFHNPDRRAIAFLQLVSSTGIFRIITRITSVIYPHKDRFFESAQRPLWGPLFTETVLRSQAPLCISRFFKVSAYATFVGNLSASLCNYTMHISPSTSHENLDLSTTHTFKQAMKRPDAKWKNPLRFSGPPSLIFSKPAYYPCPTDIKHCHTSPATPWMHCPQAPFGTCYNLTLFEPDNSTHPVTMSVNPTHFKVKLQGHRDPYPLSHYQPLTGAALSGQYSVWENEITVQENWDITSNIFSHLLSFSYAFCLNSSGVFFLCGTSTYICLPANWSGVCTLVFQYPDIELLPNNQTVPVPLFASVLSSDSVLRPKRSPHLFPFLAGLGISSALGTGIAGLATSTLYFQQLSKVLSETLEEIAASITTLQNQIDSLAGVVLQNRRALDLITAEKGGTCLFLQEECCFYVNQSGIVRDAARKLQERASELGQHSDSWGQWPDLGRWLPWLTPFLGPLLFLFFLLTFGSCLLNCLTRFVSQRLGSFVQDTAKRHVDSILQNFQYKKLPQDSPDEDTIPT", "length": 618 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BYG0-1", "protein_name": "Tetratricopeptide repeat protein 24", "gene_name": "Ttc24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSSRQYGLSDVLRALEESRKLADADRSTDQGLLGPFYNDLGMGYFQLQLFPLAVEAFLQALPLCRQPSEQATVLQNLGMTHNVLGNYWEAQEFHQKAASLHGSVGQRWEQGRSFSGLAFSLSQLGDHRAAWDSYLHALQAAQDTGDVKGQWQACEGLGAAAARLGQHDQALKYYKEALALCQHEPSSVRERLVAKLADAMRTFVAQEKIAQARFLPSAPGKLQTSRKAKTSARVQSSAEDAQESQWEGEASEGGHEKKEMEGLVNTATVLGPQRQNRATTHLPSGGPSPSGEEYPFIIAPKKLRVSRSSTWAKEALGRNFQRTRIQSGLCSIM", "length": 334 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1N8-1", "protein_name": "Alpha-defensin 22", "gene_name": "Defa22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKKLVLLSALVLLAYQVQTDPIQNTDEETNTEEQPGEEDQAVSVSFGGQEGSALHEKLSRDLICLCRKRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1P2-1", "protein_name": "Alpha-defensin 21", "gene_name": "Defa21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALILLAYQVQTDPIQNTDEETNTEEQPGEDDQAVSVSFGGQEGSALHEKLSRDLICLCRNRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C5Y2-1", "protein_name": "Mitochondrial sheath formation-associated protein", "gene_name": "Misfa", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVLGWMLFVGLATYMGTFPEAMPPTLKWKERLPGQENKARRRIQALEEELLL", "length": 53 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CDW1-1", "protein_name": "Protein FAM228A", "gene_name": "Fam228a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADTKTSKCDEHFSVEKLKEWPEPESVSLMELLAREDIDEAVHAVLFRENYVVKRLDTYLQHLAVFKERRKEMLHKKWVENVVQPLQQRITDKITSYRRPGKNQVKYEHCLKQTNKPTKVSSSCLFQKQQEFREAKGTSYQHGRGKTHDTQKEAKETEKGLSFTPFSLRPHCSSPRERQRASARLMQSKPGGRNRYKGASSEKPVFTLKSHLPKEEKTVSRSQLVFERQFRASRLSQDIKEAEKKGLVVGTGPQRPRSWAAADSVPRPSLVGRRVMTAEILGEHLVSLHQAARSGLQWP", "length": 299 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CEK3-1", "protein_name": "Serine protease inhibitor kazal-like protein, minor form", "gene_name": "Spinkl", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSTWIKFLFILTLVLLPYSVFSVNIFAGPENVIKEPNCTMYKSKSECSNIAENPVCADDRNTYYNECYFCIEKVVEKLKYRYHGICIYK", "length": 90 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8K072-1", "protein_name": "Receptor expression-enhancing protein 4", "gene_name": "Reep4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVSWMICRLVVLIFGMLYPAYASYKAVKSKNIREYVRWMMYWIVFAIFMAAETFTDIFISWFPFYYEFKMAFVLWLLSPYTKGASLLYRKFVHPSLSRHEKEIDACIVQAKERSYETMLSFGKRSLNIAASAAVQAATKSQGALAGRLRSFSMQDLRSIPDTPVPTYQDPLYLEDQVPRRRPPIGYRPGGLQGSDTEDECWSDNEIVPQPPVRPREKPLGRSQSLRVVKRKPLTREGTSRSLKVRTRKKAMPSDMDS", "length": 257 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8MP30-1", "protein_name": "Uncharacterized histidine-rich protein DDB_G0274557", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKYFLVLLVGFLLVLPSIVNPYRKGVTITNQQPKINIYQLDVNNPHNPNNNPHNPHNPNNNPHHPHHLHHHHHHHHHHHHHHHHHHHHHHHHHHPHHPHHHPHHHHHPHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHPHHHPHPHPHPHPHPHLHPNPHPHPHPHPHPHPHPHHHPNPNPHPHPHPHPHHHHHHQEASECLSYQGNRNRLFIKRDY", "length": 233 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8NG83-1", "protein_name": "Olfactory receptor 2M3", "gene_name": "OR2M3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARENSTFNSDFILLGIFNHSPTHTFLFFLVLAIFSVAFMGNSVMVLLIYLDTQLHTPMYLLLSQLSLMDLMLICTTVPKMAFNYLSGSKSISMAGCATQIFFYTSLLGSECFLLAVMAYDRYTAICHPLRYTNLMSPKICGLMTAFSWILGSTDGIIDVVATFSFSYCGSREIAHFFCDFPSLLILSCSDTSIFEKILFICCIVMIVFPVAIIIASYARVILAVIHMGSGEGRRKAFTTCSSHLLVVGMYYGAALFMYIRPTSDRSPTQDKMVSVFYTILTPMLNPLIYSLRNKEVTRAFMKILGKGKSGE", "length": 312 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8NGV6-1", "protein_name": "Olfactory receptor 5H6", "gene_name": "OR5H6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MFLYLCFIFQRTCSEEMEEENATLLTEFVLTGFLHQPDCKIPLFLAFLVIYLITIMGNLGLIVLIWKDPHLHIPMYLFLGSLAFVDASLSSTVTPKMLINFLAKSKMISLSECMVQFFSLVTTVTTECFLLATMAYDRYVAICKALLYPVIMTNELCIQLLVLSFIGGLLHALIHEAFSFRLTFCNSNIIQHFYCDIIPLLKISCTDSSINFLMVFIFAGSVQVFTIGTILISYTIILFTILEKKSIKGIRKAVSTCGAHLLSVSLYYGPLTFKYLGSASPQADDQDMMESLFYTVIVPLLNPMIYSLRNKQVIASFTKMFKSNV", "length": 325 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8R264-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r215", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNWNNIIHTIIFLSLTGPGIVGNMLIFIRHIYMPALGTEKKPVDLIVIHLAFSNMITICTTGIKDIATVFYFRNFLGDIGCKAVVFLARMARGLSICTTCLLSVVQAITISPRTSLWTKLKPQTACQIIPFILVFWIFNGLISSNLLSYIKGGSSLNRSVAATFIGHCYMLQSRHTIKWIFLSLMTLRDVIFQSLMGWSSGSMALNLYKHHKRVLYLYSSRFANNSPPEIRATWSVLILMTCFLLFYWADFILSFYHGFTVTHESILLNIKVFLELGYVSFSPYVLISRYIHPPNVFHAH", "length": 300 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R272-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLQFIKKTIFLFMTMVGILGNMSVSVHYMFSWWGSPEKKPIHLILTHLTFTNIILLLAKGLQKTIIVFGLRNFLDDIGCKIIVYLERVARGLSICTSSVLTVVQAIIISPRASGWRRLRPKSAWHILPFFSFFWILNAFISVNLIHSIRSKGMNTSQHKNSDDYCYLTPESQKIKWIVLPLMVLRDAVFQGAMGGASGYMVFLLHKHHQHVLYLQNSKLLYRTPPELRAAQSVLLLMLCFLFFYWTDCALSLFLSLSLGDSSLMINIQGFLTLGYAIFSPFVLIQRDGLIPVCWHAQ", "length": 298 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R278-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r213", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLALRNYIQINTPWCMCLFVTPLTPCLPEYWDPDSLRVEGPTESSLRHNTASCTLKNTIMQNVQFRSMSSITDAFFKMYLHTRKEEMILKILKEITFLIMTVLGILGNMSVSVNYMFSWWGSPEKKPIHLILIHLIFTNIIILLVKGLPKTIAAFGLRNFLDDIGCKIIVYMERLARGLSICTSSLLTVVQAIIISPRASGWRRLRLKSAWHILLFFLFFWILNALISVNLIHSTTNTRLNVSQLKSDDNYCYFMLPIQKIKWIVLPLMVVRDAVFQGAMGGASGYVAFLLHKHHQHVLYFQNSKLLYRTPPELRAAQSVLLLMLCFVFFYWTDCAFSLFLTLSSEVNILMVNTRDFLTLGYATFSPFVLIHRDGLLVECRHVQ", "length": 384 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2A9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r229", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDFGNLAMGIVLSLQSALGILGNFSLLFYYLVLYNKERTLKIIDIILIHVFTSNSLIIFSKGLPEVLAVFGWNDLFDDVGCKLIMYVRRVSRSMSISMTCLLSVFQAITISTRNSCWKEFKEQTAKFMGLFISLCWILFMLVNMLFPVYTSTNRNSKNKTQKKDIEFCHSVGRDKMVDIMYTAFCVFPEVLFSLLIVSSSTTMIVILYGHKKRVQHILHTHASPRTSAENRATQTILILVCTFLAFYTLSSVLQGYVALSHDPSWWVMNITTIISMGFPAIGPFVMSRDFTVSRFCFTCIGNLKLP", "length": 306 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r178", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHDKSLKTTDDMTLQILLLCQFVVGTVANVFLFLHNISPVLTGSKQRPRQLILSHMSVANALILFLTSFPDMMAFAPRNSPTHLKCKLEYFSRLVARSTNMCSTCVLSIHQFVTLVPVNRGKAILRASVPNLTSYSCYSCWFFSVLSNIYIAIKVTGPQITDNNTDSKSKLFCFTSGFSVGIFFLRIFHDGTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNFICIIFYTFSIDSRLFMSHFSKVFAAGFPTISPLLLIFRDPKYPCSVLFNC", "length": 304 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r64", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKTLKTMEVLALQILLLCQVVVGTVGNIFLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLFAYSYDLIDFVPRKPPTDLKCKLAYFFNMVAQGTIMCSTCLLSTYQFVTLVPGNWARVMFREISPKVVSYCCYSCWLFSVLNNAYMPMYVSGPQKTHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFIGIMAWTSVSMVIHLNRHHHRMHYLHNPNQINRGHAETKAAHTIMMLVVTFVSLYILDCICSLFHISFVESRLWLIDVIELLHLSFPTVSPFLLICRDPMGPCSLLFIVGLEIHVTVGAITEEQ", "length": 320 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r59", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDFVPRKPPTDLKCKLAYFFHMVAQGTIMCSTCVLSTYQFVTVVPGTWARVMFREISPKVVSYSCFSCWLFSVLHNAYIPMNVSGPQKTHNDSDSKGNSICSISGVNVDMHFLRFSHDIIFLGIMAWTSVSMMIHLNRHHQRMNRIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFHISFVESRLWSRHVIKVLALSFPTISPLLLIFRDPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2C0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r62", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALQILLLCHVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLFAYSYDLTDIVPRKPPTDLKCKLAYFFHLVARGTIMCSTCVLSTYQFVTLVPGTWARVMFSEISPKVVSYCCYSCWLFSVLNNAYMLMNVSGPQKSHNDSDSKSNSICSISGVSVDMNILRFSHDIIFLSIMAWTSVSMVIHLHRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFYISFVESRLWLRYVTKLLALSFPTISPLLLIFRDSKGHCSLHIMSVWKST", "length": 300 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R4R9-1", "protein_name": "Protein phosphatase 1 regulatory subunit 14C", "gene_name": "Ppp1r14c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSVVTGGGEAAGGTSGGGARVFFQSPRGGTGGSRESSSHSGSSREDSAPVATVAAAGQVQQQQRRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMPDVEIDIDDLLDADSEEERASKLQEALVDCYKPTEEFIRELLSRIRGMRKLSPPQKKSV", "length": 164 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8R4V1-1", "protein_name": "NFAT activation molecule 1", "gene_name": "Nfam1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESWLLRRGARVRCLHPPSWLPAWCFLCLLPVPQTLQLTGLVSLTHTSLPIMVSLANTDVFFSCRIEDFTRLQRDLPVKLFHTDIHGRRRWEKQINCQHRPGMENHTRDCMVKLSQANTSATGIYYFIVEGEETYQSDGVVILVRDTVYQPPAFKVQEALMLGFTSLMSVLGVLGTALLLWKKKQISVLGKHTAKTCSGLKSTVGTTKPPAESVYTSLQRRETEVYACMKEETGSPVFSQSPATKEKLNRFEDDNEFNLVYENL", "length": 264 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8T277-1", "protein_name": "5'-AMP-activated protein kinase subunit gamma", "gene_name": "prkag", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWYPGDEDEEFTSIIENIEKKETQEIKIKTEKLRQASLNQLPIEQSEGVGGGELSEYNNNTTNNNTPTNTTTTTNTNTTTMNNSNNNNERILSTSNGFDIRLPPNSIEQPSPSFISSSQDGVLTVDPLAVDGEKGNKESQSPPNGDNQILNNNNMFFKDITSLPSTDNKSSTNTNNNNNENPLKQTISSSPSKSTTTTTTSTSTTTTPSLSSLSSNNNNNSNSNNNYINHSSISTVSEGLENLNLKSGIKKIDSETEKYIEEGKQVFVNFLKGHTCYDVIPISGKVVVLDTKLAVKSAFYALEENGIKSAPLWNSEQHDFTGMITVSDFIDILLYYYKKPKSNNIFQDMGIHRIETFWREISVERPSSLISTEPETNLYDAASLLLCYKIHRLPVVDKKDTNSILHILTHSRILAFMMKSFPQLPEKLLSIPIGSLGIGTFATVVTVMTHTPLVEVLELLSEKKISAVPIIDSETSKIVDVYSKSDVTLMSKQGILSPSDLNLPVHQVLSTFTKLWQRPEQIYTCTRFDKLGDVIERCIKKRVHRLVCIDSSKKVEGILSLSDILNYLLNDVKSINH", "length": 577 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8VEU4-1", "protein_name": "Olfactory receptor", "gene_name": "Or14j2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVENITTMRGFLLMGFSDNHELQILQALLFLVTYLLGSAGNVIIITITTLDPQLQSPMYYFLKHLSILDLSSLSVTVPQYVDICLTQSGYISYAQCMLQIFFFTGFAWGEVAILTVMSYDRYVAVCLPLHYEVIMGPSKCRWAVTAVWLSSVIPGTLYIASIFSIRFCGDRIIHQFFCDVPQVLKFSCSDDYLVTVGVADFLSAVAFACFIGIVNSYVHIFSTVLRMPSAESRSKVFSTCLPHLFVVLLFLSTGIFAYLNPTSDSPTALQFLVSIFYTVLPPTLNPVIYSLRNETIKSVIRKLLLSSKFTG", "length": 312 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VFX0-1", "protein_name": "Olfactory receptor", "gene_name": "Or5b101", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENRTEVRCFILVGLTNDPSLQLPLSITFLLIYIITLIGNLGLILMILLDSRLHTPMYIFLGNLSLVDFCYSSTVTPKVIAGFLTGDKIMSYNACASQMFFFANFGDVENYLLASMAYDRYVAVCKPLHYATTMTTHMCASLVIGCYICGFLSASIYTMDALSLSFCESNVIHHFFCDVLAVMIVSCSDSHVNELILIYVVSFNMFFALIIILISYMFIFTNILKIHSSAGYHKAVSTCASHFTAVSIFYGTIIFMYLQPSSSHTMDTDKIASVFYTMVICMLNPLVYSLRSKDVKSAFTKIVLRSK", "length": 307 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VY69-1", "protein_name": "Vesicle-associated membrane protein 723", "gene_name": "VAMP723", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEMLGSSESQPQAFYIKRTQMKRKKWFQNMKIKLIVLAIIIALILIIILSVCGGFNCGK", "length": 217 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ67-1", "protein_name": "Uncharacterized zinc finger CCHC domain-containing protein At4g19190", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGEGEGSGIRLSKRFAGGKVTGGSLEVDYKTKSGTAWSHSFLNQKPWHPLSYPNQRRKWIAEQTHAQHDRRAEEVAREFAQEQEFFKQAALISKKEREKIETMKAVSFMYVRPPGYDPESAKAAEYKDEKHKGQGSSTQDPVADDNVGSRPEESQGGGERTQERKKPRPKDVFGRALPTEEEFEVLKNAPRMETGIPGRVKPFAVEVRNVKCLRCGNFGHQSGDRDCPLKDAVMPNEELRLKRDDPLTAIIAHTDPSEPLKWELKQKPGLSPPRGGFDPDDPNQQIVAEDIFDEYGGFLEGSIPIEILKSMSSDKKRKSKKNKRHKKHSSRTVEETDESSTGSEDSREKRGSKKRKKLKKKSKKQYDSDSLSFEGSGSDSYRLSRRRHTKHVDPSASLKSEVYHQGNSHREKHYYDEKHQKRKEIVDRPSASSDDSDYYRSNSSRKKRSEDDYKSHHRERKQVHSNDPVSEKSQKQHYSESGKIQRVEKEHRYDERRHRYVDMESENRNRSEKKPRYDDRDSEKHHRSVKGKEKHVYEASDDPEEFSDRYRSTKKTESDSESNRRSRKKKHELSSEEEEGESRKHRYSTNRRRN", "length": 595 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q91V82-1", "protein_name": "Beta-defensin 8", "gene_name": "Defb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRIHYLLFTFLLVLLSPLAAFSQKINEPVSCIRNGGICQYRCIGLRHKIGTCGSPFKCCK", "length": 60 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q923B3-1", "protein_name": "Neurotrophin receptor-interacting factor 1", "gene_name": "Nrif1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASTLPTTWPHESVKFEDVSLTFTEEEWAQLDFQQKCLYREIMMENYSNMISVEHHFSKPNVISQLEKAEDCWPMQREIPQDTLPECSWPSPDPGMNSFPSKSPLMKIEVVEVLTLNKDVAGPRNALIQSLYPEDLNPGNLKPAQQPSKRLTDTEASRQKFRHFQYEESAGPQKAMSQLRKLCHQWLQPNTRSKKQILELLVLEQFLNALPEKFRVWVESQHPEDCKAVVALLENMTSVSKDDASLACSSEATDQLKEKRKGVATLPVTFAAEVPAEEPVTFQDVAVDFNEEEWRLLGPTQKTEYHDVMLETLGNLVSVGWEPTLGNRELTPDSPIPVVKPIHDPNTNDLSRNGTQSTVFESILEDGVKEMHSIESNQVGNLQEKGHPQKKFSESSKSQDQTSRHKSQGSLNEVLPRKYVKVKQKGTGKRKGRTNTISMTRGLRIRKQQKDSVEWQGRSGSTPVTHGSSIKKQQQGSEQGKPGTSRDPITLTVPAKVYQKATGSEESIFMDSSDAMVPDVPPKIHQKGPEWHKVGESNNSMLQGSSVQNHQMESGAGRASDNSLLTHALPVKSHQKGYKEGNVQGNRNSWKHIKPHQKGSKGERVEELSTSEKHVPYVKNHLKTSERGKDREINASIKCDPYIKTYYRGSDVGRLRRANNCRKAFSLHAQQISFIKIHKGSQVCRCSECGKLFRNARYFSVHKKIHTGERPYMCMACGKAFVQSSSLTQHLRIHSGERPFECSECGRTFNDRSAISQHLRTHTGAKPYHCERCGKAFRQSSHLTRHERTHTGERPYVCIKCGKAFTQSSHLIGHQKTHGIKFKKQPKL", "length": 828 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q924S2-1", "protein_name": "Inactive 2'-5' oligoadenylate synthetase 1C", "gene_name": "Oas1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENGLCSIQARELDEFICDYLFPDTTFLTELRADIDSISAFLKERCFQGAAHPVRVSRVVMGGSYDEHTALKGKSEAKMVLFFNNLTSFEEQLKRRGEFVEEIQKHLCQLQQEKPFKVKFEVQSSEEPNSRSLSFKLSSPELQQEVEFDVQPAYDVLYELRNNTYAEPQFYNKVYAQLIHECTTLEKEGDFSICFTDLHQNFMRYRAPKLWNLIRLVKHWYQLCKEKLREPLPPQYALELLTVYVWEHSNKNQEKVTTAKNFRTFLELVAYYKNLRIYWTWYYDFRHQEVCAYLCRQLKKARPLILDPADPTRNVAGSDLQAWDLLAKEAQTWMQSSCFRNCDMSFVPTWDLSPERQECAFQ", "length": 362 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q925U0-1", "protein_name": "Oocyte-secreted protein 1", "gene_name": "Oosp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKPFVGLLGLLLLLSFMKTCADDWTAISLQCADHWFHLRIRPTIFHNIFMEPDEVFLGIGCPVTTTWPNDTYEFIYRTYSCGIANKVLCDVTLLKTQLTYISKNASLQAEMSLSCVMHNQSPHFCEAESRGDFTGDPPGWTEDMRARRDEQTVPMVQPNLSTSSEDHHVSTEPWASETSRSEAAEVPSFMDQNFSVFHFSRM", "length": 202 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q94490-1", "protein_name": "Ubiquitin conjugating enzyme E2 B", "gene_name": "ubcB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MAAHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVFSTWSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKEWTKKYAK", "length": 148 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q945S5-1", "protein_name": "Vacuolar cation/proton exchanger 4", "gene_name": "CAX4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSISTESSSNLSLLENGGGGSDKPTAETSRRVRRTVSASSLIRKRSDLKLISRVRWEFMRRILTNLQEVLLGTKLFILFPAVPLAVVAHRYDCPRAWVFALSLLGLTPLAERISFLTEQIAFHTGPTVGGLMNATCGNATEMIIAILAVGQRKMRIVKLSLLGSILSNLLFVLGTSLFLGGISNLRKHQSFDPRQGDMNSMLLYLALLCQTLPMIMRFTMEAEEYDGSDVVVLSRASSFVMLIAYLAFLIFHLFSSHLSPPPPPLPQREDVHDDDVSDKEEEGAVIGMWSAIFWLIIMTLLVALLSDYLVSTIQDAADSWGLSVGFIGIILLPIVGNAAEHAGAVIFAFRNKLDITLGIALGSATQIALFVVPVTVLVAWTMGIEMDLNFNLLETACFALSILVTSLVLQDGTSNYMKGLVLLLCYVVIAACFFVSNSPSSKLLF", "length": 446 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96AK3-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3D", "gene_name": "APOBEC3D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNPQIRNPMERMYRDTFYDNFENEPILYGRSYTWLCYEVKIKRGRSNLLWDTGVFRGPVLPKRQSNHRQEVYFRFENHAEMCFLSWFCGNRLPANRRFQITWFVSWNPCLPCVVKVTKFLAEHPNVTLTISAARLYYYRDRDWRWVLLRLHKAGARVKIMDYEDFAYCWENFVCNEGQPFMPWYKFDDNYASLHRTLKEILRNPMEAMYPHIFYFHFKNLLKACGRNESWLCFTMEVTKHHSAVFRKRGVFRNQVDPETHCHAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPECAGEVAEFLARHSNVNLTIFTARLCYFWDTDYQEGLCSLSQEGASVKIMGYKDFVSCWKNFVYSDDEPFKPWKGLQTNFRLLKRRLREILQ", "length": 386 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q99N64-1", "protein_name": "Germ cell-less protein-like 2", "gene_name": "Gmcl2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9C7P4-1", "protein_name": "Putative zinc finger CCCH domain-containing protein 9", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MADAGDNQQEAERRSDETESRSIKEPKEKEDEDENPQDQIQSKERMRQSSPYPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQRPQELPVRICKHIMDRNVAEPMYQDWRESESERRFDERTQRTFGDERTQRRYGIEYSGARPEKRSKIVPDFQMRDPRHHDTEWRFERERMERIERQRREAEENLQEQRQRDSIERQRREAEENLQEQRQRDSIERQRREAQENLQQQRQRDSIERQRREAQENLQQQRLQDMPENHNVDDQQNLQEQRRISIEKERTEARLRLEQIRPTVSFPINEFIRAVVLLRELIENWDDKAWKK", "length": 321 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8M4-1", "protein_name": "DNA-directed RNA polymerase subunit 12-like protein", "gene_name": "NRPB12L", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLQQSETDDKQPEQLVIYVCGDCGQENILKRGDVFQCRDCGFRILYKKRILDKKETRIGV", "length": 61 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CQK8-1", "protein_name": "Small proline-rich protein 2A1", "gene_name": "Sprr2a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CWP4-1", "protein_name": "Lymphocyte antigen 6K", "gene_name": "Ly6k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAFLVALLVVLGLQLVQSNALTCHVCEAQNSYACSNPSQCPGEKKFCLLAVTRIFERFFYVSKQCTRRCPTPVVSPPSTNPPSEPKEFLIEKPMPFLFYKCCQWDSCNGEGPPTDQLLKEQPGKASGRRHRYIELLLTGFMVLTANGLSALCLL", "length": 154 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D541-1", "protein_name": "Coiled-coil domain-containing protein 7A", "gene_name": "Ccdc7a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKCAKHPSTISMKLTSVPELPYKKGLLNSSPKPKEKHNAKSKYGKNESMVLRSPPTGESIVRFALPIPLSKTKDKISADEMVRRITTNLKMVVSNLEDTYGACYDNGEKAAEKSEAEGLSIGDDVSSFLLCCSQFTSQLEEAVKEECGALESLYKWFQQQVNQMEEISKDQSNLEELQSDGKTASLNIVQIAKLARKFEDFKSRLKTRKEVMQTKNEDKEIMAETLKHYGLMEKQIEEFITSHSALESQTETESQSGTPSVTTRMARMIKIFENQSTMLEKALNDQQTIESKYKQLETDFQMLIMEKTLLEAEIRRLREIERVKSAAKEEQTKKSGKSEKKKFKEKEKNLSPNREFKSIEELLQIQKEAELLKTEKKTLQGQLKWALEEAERNKTQLEFVLHQKMEMFKEESKTKVGQSQNKSKVKIEDSKDSLPKKSDTQLGGQRKDQISSDQSKRPKKKQLADIDPSAVEDFPPETFKSFTVMPLIEEHRESISSQPKEEMAKASEQSEAEDIEGPLEIPSESSNEDDDLLPEDESPMMEQVTDVGRYKSIYISAEPIDTMSLISRTQSEMETLEAINYDNVLNEGEEQDKKIGKDSDTGRKSKRKRSSKIRKLSTHEEESDIVHYEEATKAKVPSKKRASDPYGDEAYESRGSVSKAQTYTKKQGTHQRGRGSASDAYGDEAYESRGSISKAQTYTRKQGTHQRGRGSVQEEESDTVHYEEVTRAKVPSKKQASDPYGDEAYESQGSVSKAHTHTKKQGTHQRGRGSVHEEESDTMNYEVPRKSKISSRRKGFALPITHQVEMHSSESQGSISKSNTETKKQGTHKRGRDSDADGARTPVSQGSDSKADTERKKHRSKEESTISKDSIPVLDEVQDKTFEHQESGLRLEVQAKKLTFSSQNIHNEESATDIKVEYQNVPSSSQVQLKKQKPLGGEIFTTHFVVPAESHAQLYQTHTPETQIERGTTSGTARLTTIPVEHPKKEASPDNLFPEKKLYITRAPTQTKKQYPPWDAKAETQKKTVKEVQGISEPQTKLNPTMSGIILHLDMDRVVETDLENLEETIVPHVLRSELEIGTDAKNMPETPTSREAVRTEAKGNQDVTISIAKGMKLIGKLKDQHGLSSFASKDTISPGKSLIKSSRDNQDDSLLETKPQENTSDKYHPSKTFPTKVINMLPFSEKSLGSTSANVDVAPKPVYRASRGRSRISKALQQLLKTSEHLKPTSTKNQNADLEKHLYISVRSANKHTQKDKKHGQSNNQKLKKQGALSSTKKQKHKEQPKTETIVENNDKFDDNLMMTTSSPNIKIIKELSKTLNLDGGDIELSDFVFKTASAAKKLENKGPSKTKNLNKESSRDIHILHLTTSAIRTLLLDEEAKIRSLEKKLMKQSTILQKSVSSMKKFMFEEPSRETKMKRKKREKRKIVVKSPHILPITTTQKHTIKEKSEISNLEKPIVRGTDILKKSTSARKKRVLKGKSKSATLPKKCDNFPFDLVRSSSDSSKQEVEEQPKPGNVDKKVSDDSYSPDISTTPTKKHTLKGQSKSRTIYEKGVDLPNNLVLSKSASSIQEFEEQPQPGNVDKKVSDDSYSPDISTSPTKKHTLKGQPKSENSDEKGIKRPNNLHMSASVARKRLLKALSTIP", "length": 1642 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D5R2-1", "protein_name": "WD repeat-containing protein 20", "gene_name": "Wdr20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATEGRGKETNEIKTHFTTREGLYRLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQTGNGNRLCFSVGRELYVYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSDSLFLVAHSSGNMYSYNVEHTYGTTAPHYQLLKQGESFAVHNCKSKSTRDLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSAELHGTMKSYFGGLLCLCWSPDGKYIVTGGEDDLVTVWSFLDCRVIARGRGHKSWVSVVAFDPYTTSVEESDPMEFSDSDKNFQDLLHFGRDRANSTQSRLSKQNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARAHANVMNATGLPAGSNGSAVTTPGNSVPPPLPRSNSLPHSAVSNAASKGSVMDGAITSGVSKFALLSLHDRKERHHEKDRKRNHSMGHISSKSSDKLNLVNKAKTDPAKTLGTSLCPRMEDVPLLEPLICKKIAHERLTVLVFLEDCIVTACQEGFICTWARPGKVSKFQP", "length": 567 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAF8-1", "protein_name": "Uncharacterized protein C4orf51 homolog", "gene_name": "", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTHFLYLTPEILLPFSPLTSTEFELIRRKAQQLWQDETRWSASSMTTYSGSYREKQLDEATCNRLAQRVGQPQFEYKPTPLPGSSAYNTLPGHAGSQEAADGKGRLPDIASPSRDSPLNIKHKVAHQIWGSEVPCPTFLAYRGLRMSPCMQPKKPGFELLMSYRNRGKALLKRLQRQWDYESKLGSSEDSGTDRFSSNTSGSSGRKFK", "length": 208 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPV9-1", "protein_name": "Beta-defensin 5", "gene_name": "Defb5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKIHYLLFAFLLVLLSPLAGVFSKTINNPVSCCMIGGICRYLCKGNILQNGSCGVTSLNCCKRK", "length": 64 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPX4-1", "protein_name": "P2Y purinoceptor 12", "gene_name": "P2ry12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVPGANATSANTTSIPGTSTLCSRDYKITQVLFPLLYTVLFFAGLITNSLAMRIFFQIRSKSNFIIFLKNTVISDLLMILTFPFKILSDAKLGAGHLRTLVCQVTSVTFYFTMYISISFLGLITIDRYLKTTRPFKTSSPSNLLGAKILSVAIWAFMFLLSLPNMILTNRRPKDKDITKCSFLKSEFGLVWHEIVNYICQVIFWINFLIVIVCYSLITKELYRSYVRTRGSAKAPKKRVNIKVFIIIAVFFICFVPFHFARIPYTLSQTRAVFDCNAENTLFYVKESTLWLTSLNACLDPFIYFFLCKSFRNSLMSMLRCSTSGANKKKGQEGGDPSEETPM", "length": 343 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9ER80-1", "protein_name": "Receptor-transporting protein 4", "gene_name": "Rtp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLFPDDFSTWEQTFQELMQEEKPGAKWSLHLDKNIVPDGAALGWRQHQQTVLGRFQCSRCCRSWTSAQVMILCHMYPDTLKSQGQARMRIFGQKCQKCFGCQFETPKFSTEIIKRILNNLVNYILQRYYGHRKIALTSNASLGEKVTLDGPHDTRNCEACSLNSHGRCALAHKVKPPRSPSPLPKSSSPSKSCPPPPQTRNTDFGNKTFQDFGNRTFQGCREPPQREIEPPLFLFLSIAAFALFSLFTR", "length": 249 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9FFP9-1", "protein_name": "Serine/threonine-protein kinase SRK2H", "gene_name": "SRK2H", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDKYEVVKDLGAGNFGVARLLRHKETKELVAMKYIERGRKIDENVAREIINHRSLRHPNIIRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEAEARYFFQQLICGVDYCHSLQICHRDLKLENTLLDGSPAPLLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKHADVWSCGVTLYVMLVGGYPFEDPDDPRNFRKTIQRIMAVQYKIPDYVHISQECRHLLSRIFVTNSAKRITLKEIKKHPWYLKNLPKELTEPAQAAYYKRETPSFSLQSVEDIMKIVGEARNPAPSSNAVKGFDDDEEDVEDEVEEEEEEEEEEEEEEEEEEDEYEKHVKEAHSCQEPPKA", "length": 360 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLZ3-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN12", "gene_name": "KIN12", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGSSEKTTNKLVSILPNYRIGKTLGHGSFAKVKLALHVATGHKVAIKILNRSKIKNMGIEIKVQREIKILRFLMHPHIIRQYEVIETPNDIYVVMEYVKSGELFDYIVEKGKLQEDEARHLFQQIISGVEYCHRNMIVHRDLKPENVLLDSQCNIKIVDFGLSNVMHDGHFLKTSCGSPNYAAPEVISGKPYGPDVDIWSCGVILYALLCGTLPFDDENIPNVFEKIKRGMYTLPNHLSHFARDLIPRMLMVDPTMRISITEIRQHPWFNNHLPLYLSIPPLDTIDQAKKIEEEIIQNVVNIGFDRNHVVDSLANRIQNEATVAYHLILDNRNQNSVPNDPFQSKFKEISDGIFNSTLPVQNITSHVGHSFSALYGLKSNVKDDKTWTLGLQSQGSPYDIMTEIFKALQNLKICWKKIGLYNIKCRWVRSFAYYKNHTIEDECAIILPTVIKFEIQLYKVREGKYLLDILRIDGPQFIFFDLCVAFLRELGVL", "length": 494 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FVV4-1", "protein_name": "DEAD-box ATP-dependent RNA helicase 55", "gene_name": "RH55", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDSSPPNTIIEEAPPRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVARAVRLDFAKCREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQAVADLAKAGLRNPYLKCEADQKSSQLVHLLIENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIVYIRSLAIKDREVLEKGLKAFVSFVRAYKEHQCSYIFSWKGLEIGKLAMGYGILSFPYISEVKQDRIGIVGFTPVQGITFEDIKFKNKSREKQRQQNLLARKDKLQQEKRGKRKKSSKEAVDDSNKASRKRKLTGRQRQTIQTAQDEEEMNLRL", "length": 465 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9JI02-1", "protein_name": "Secretoglobin family 2B member 20", "gene_name": "Scgb2b20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACLPFFEGYASVLSGSRVWLYQELQAFNATAEEKVALEKIQDCFSEERIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JJQ7-1", "protein_name": "X-linked lymphocyte-regulated 4B", "gene_name": "Xlr4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSNDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKRVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JLV9-1", "protein_name": "Prolactin-2C5", "gene_name": "Prl2c5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPSLIQPCSWILLLLLVNSSLLWKNVASLPMCAMRNDRCFMFFEDTFELAGSLSHNISIEVSELFTEFEKHYSNVPGLRDKSPMRCHTSFLPTPENKEQARHIRYEALLKSGDMILDAWENPLDYLVSELSTIKNVPDIIISKATDIKKKINAVQNGVNALMSTMNGDEENKNPAWFLQSDNEDARIRSSYGMISCLDNDFKKVDIYLNILKCYMLKIDNC", "length": 222 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9LJY9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 18", "gene_name": "CYP705A18", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATLISVDFQHCFMYIILLCLFSLLCYSLFFRKPKGTRVGCDLPPSPPSLPIIGHLHHLLSSLTHKSLQKLSSKYGPFLHLRIFSVPIILVSSASVAYEIFKAHDVNVSSRGAAAIDESLLFGSSSFIYAPYGDYWKFMKKIFATKLLRPQVLENSRGVRAEELKRFYRRILDKARKNENIEISKESAMLMNNILCRMSMGRSFSEENGEAERVRGLVGESYALVKKIFFAATLRRLLEKLRIPLFRKEIMGVSDRFDELLERIIVEHKDKLEKEHQVMDMMDVLLAAYRDKNAEYKITRNHIKSFFVDLFVGGTDTSVQTTQWTMAEIINNPNILQTLRKEIDSVVGKSRLIHETDIPNLPYLQAVVKEGLRLHPPGPLLIRTFQERCEMKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLSYSRSGQEDEKEQTLKYLSFGGGRRGCPGVNLGYIFVGTAIGMMVQCFDWKIEGDKVNMEETYGGMNLTMVNPLKCTPVPRTQPFSFTSNLEILSS", "length": 524 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSY1-1", "protein_name": "SKP1-like protein 8", "gene_name": "ASK8", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSTKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKHHVDAANPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE", "length": 152 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTG5-1", "protein_name": "Callose synthase 4", "gene_name": "CALS4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MNQPNRGQILQTVFSHFFPVASPDSELVPSSLHEDITPILRVAKDVEDTNPRSLFLQDLDIKSVDDSINILSGHSHALDKANELDPTSSGRDVRQFKNTILQWLEKNNESTLKARQKSSDAHEMQSFYQQYGDEGINDLLNAGAGSSSSQRTKIYQTAVVLYDVLDAVHRKANIKVAAKILESHAEVEAKNKIYVPYNILPLDPDSKNHAMMRDPKIVAVLKAIRYTSDLTWQIGHKINDDEDVLDWLKTMFRFQKDNVSNQREHLILLLANVQMRQTQRQPNLLDDRALDTVMEKLLGNYNKWCNHVGLESSLRFPKDKQQKVVQQRKLLYTGLYLLIWGEAANLRFMPECLCYIYHHMAFELFEMLESKGSKKKYKPKNPTYSGKDEDFLTKVVTPVYKTIAEEAKKSGEGKHSEWRNYDDLNEYFWSKQYLDKLGWPMKANADFFCKTSQQLGLNKSEKKPDLGDGCVGKVNFVEIRTFWHLFRSFDRMWSFYILSLQAMIIIAWNETSESGGAVFHKVLSVFITAAKLNLFQAFLDIALSWKARHSMSTHVRQRYIFKAVAAAVWVLLMPLTYAYSHTSIFIVAILIYLSPNMLPEMLLLIPSIRRTLEKSDFRPVKLIMWWSQPELYIGRGMHESAWSIYKYMMFWIVLLTSKLAFSYYVEQIKPLMGPTKEIMSVPMPGYWLPEFFPHVKNNRGVVITLWSPVILVYFMDTQIWYAIVSTLVGGLYGAFRHIGEIQTLGMLRSRFQSLPGAFNACLIPNENTKEKGIKLAFSRKCHKIPNTNGKEAKQFSQMWNTIINSFREEDLISNRELELLLMSCWAYPDLDFIRWPIFLLASKIPIAVDIAKKRNGKHRELKNILAEDNCMSCAVRECYASIKKLLNTLVTGNSDLMLITTVFTIIDTHIEKDTLLTELNLSVLPDLHGHFVKLTEYVLQNKDKDKIQIVNVLLKILEMVTKDILKEEIKRLHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMEMPGAPKIQNMLSFSALTPYYSEDVLFSTFDLEKENDGVSILFYLQKIFPDEWKNFLERVKCGTEEELDAIDYLKEEIRLWASYRGQTLTKTVRGMMYYQKALELQAFFDLANERELMKGYKSAEASSSGSSLWAECQALADIKFTYVVACQQYSIHKRSGDQRAKDILTLMTTYPSLRVAYIDEVEQTHIYSKGTSENFYYSALVKAAPQTYSTDSSDSGHMLDQVIYQIKLPGPPIIGEGKPENQNNAIIFTRGEALQTIDMNQDYYIEEAFKMRNLLQEFLEKNGGVRYPTILGLREHIFTRSVSCLAWFMSNQEHSFVTIGQRVLANPLKVRFHYGHPDVFDRVFHLTRGGVSKASKVINLSEDIFAGFNSTLREGTVSHHEYIQVGKGRDVGLNQISMFEAKIANGSGEQTLSRDLYRLGHQFDFFRMLSCYFTTVGFYFCSMLTVLTVYVFLYGRLYLVLSGVEKELGNKPMMMEIILASQSFVQIVFLMAMPMIMEIGLERGFYDALFDFVLMQLQLASVFFTFQLGTKFHYYCKTLLHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKATELGILLLVYHIFGPTYIGLFTISIWFMVGTWLFAPFLFNPSGFEWHEIVEDWADWKKWIEYDNGGIGVPPEKSWESWWEKDIEHLQHSGKWGIVVEIFFALRFFIFQYGLVYQLSAFKNKYSSLWVFGASWLLILILLLTVTVLDYARRRLGTEFQLLFRIIKVSLFLAFMAIFITLMTCRLILPQDVFLCMLALIPTGWGLLLIAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAFSRGLHISRILSGQRKHRSSKNKD", "length": 1871 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LU95-1", "protein_name": "Pyruvate kinase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEMLLGGQATNGALRSKTKIVCTLGPASRSVEMIEKLLKAGMNVARFNFSHGSHSYHQETLDNLRTAMDNTGILCAVMLDTKSPVIRTGFLKEGKPIQLKQGQEITISIDYKIQGDSNTISMSYKKLAEDLKPGDVILCSDGTISLNVLSCDKYLGLVRCRCENSALLGERKNVNLPGIVVDLPTLTEKDKEDIMQWGVPNKIDIIALSFVRKGSDLIQVRKLLGEHSKSIMLMSKVENQEGVMNFDKILENSDAFMVARGDLGMEIPIEKMFLAQKTMINKANAHGKPVVTATQMLESMTVSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAHPETAVLTMSRICKEAEDFIDYDILHKKTLGMVSLPLSPIESLAASAVSTARSVFASAIVVLTRGGYTAELVAKYRPSVPILSVIMPEIAECSDSVAHVARRGLIYRGIIPVVGCSARDSTEEMIRLAIGFAKTKGICKTGDSIVALHKIDGSSIVRIVSVE", "length": 497 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LX08-1", "protein_name": "Annexin D6", "gene_name": "ANN6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASLKIPANIPLPEEDSEQLHKAFKGWGTNEGMIISILAHRNATQRSFIRAVYAANYNKDLLKELDGELSGDFERVVMLWTLDPTERDAYLANESTKLFTKNIWVLVEIACTRPSLEFFKTKQAYHVRYKTSLEEDVAYHTSGNIRKLLVPLVSTFRYDGNADEVNVKLARSEAKTLHKKITEKAYTDEDLIRILTTRSKAQINATLNHFKDKFGSSINKFLKEDSNDDYVQLLKTAIKCLTYPEKYFEKVLRRAINRMGTDEWALTRVVTTRAEVDLERIKEEYLRRNSVPLDRAIANDTSGDYKDMLLALLGHDHA", "length": 318 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXS7-1", "protein_name": "Citrate synthase 1, peroxisomal", "gene_name": "CSY1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEISERARARLAVLNAHLTVSEPNQVLPAIEPWCTSAHITAAPHGSLKGNLKIVDERTGNEYQVPVSEHGTVKTVDLKKITTGKDDKGLNLYDPGYLNTAPVRSSISYIDGDEGILRYRGYPVEELAEKSTYTEVTYLLIYGNLPSQRQLADWEFAISQNSAVPQGVLDMIQSMPNDVHPVGALVTAMSALSIFYPDANPSLMGLGVYKSKQVRDKQIVRVLGQAPTIAAAAYLRKAGKPPVQPLSNLSYSENFLYMVESMGDRSYKPNPRLARVLDILFILQAEHEMNCSTAAARHLSSSGGDVYTAVSGGVGAIYGPLHGGAVEATINMLSEIGTVENIPEFIESVKNKKRRLSGFGHRIYKNYDPRGKVVKKLADEVFSILGRDPLVEVGDALEKAALSDEYFVKRKLYPNVDFYSGLINRAMGIPSSFTAVSRIAGYLSHWRESLDDPDTKIMRPQQVYTGAGIRHYETVRERTKL", "length": 480 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY06-1", "protein_name": "Glycine/proline-rich protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MITCILKISISSFIVLRIFSFLWFSRWFCCGLCGRFWFRCWFCCWFQFWFRCRFYCRFDTGFDVRFAAGFAADLTIGFTIGFDSGFATFLDVGLDDGFATGLDISFAGGFVTGFATDFDVGFDTGFTIGFDTGFDVGLPAVFSIGFDTGFAVGFAISFTVGFDAGFPTGFFVSLDVGFVADFVIGFATGIGVGFEVDFATDFDTCFATGFAVSFDVGFAGGFSIGFAADFANGFTVGFDGGFDASFFVGLDVGFVVGFVTSFAAGLDVGFAIDFATGFDTGFAFGLAFGFDVGFAAGFAVGFATGFTVVFDVGFASDFFVGLDVGFLTGFATDFDIGFVVDFDIGFATGFVVGFDDGSIVGLVVGLPASLDDGLAIDFVVGLDIGFVTGLFVGLVDGLTTDLDVGLVDGLDDGLDDGLDVDLVVVGFVVDGLAVDLDVGLGVGLTVGFVDGLDVGFDDGLDADTVDGLDVGLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDGLDVDLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDDGLVVGLFDVFVGTGLSWEIPPPGKLPPDASPLGIGSFGVGPPGASPFIASPSGEGPLSEGLLGIRSFGISPLSIRPLGISPLGISPPNIEPSKADASDADPSNAGPLGISPLSIDPPVAGASDEGPLGKLPPDLSPPGKGSSGEGPLVESPPSEGPLGVDPLGAGSLGISPLGKSPLRIRPLGISPFGKIPSNIDPSSALASDGGPPDEPASAEGSPDVGIFGISPPIIDPPVEGASDGDPPEKLSLDISPLGKGPSGVSLLGAGPPGVGPVIASPPGEGPRDAGPLGAGSLGISPLNIRRLGISPSGISPPNIDLPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGESESDGDPAGKLPLDISPLSKGPSCVSPLGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLSISPFGISPSSIDSPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGEDASDGDPPGKFPLDISPLGKCPSGVSPLGVGPPGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLGISPFGISPPNIDLPVAGTSIGGPLDEGASDGGPPDVGPFGISPSIIDPPGEGAFDGDPPGKLPLDISPVGKGPSGVSPPGAGPPGDGPVIASPPGESPLDAGPLGAGSLGISPFGISPPNIDWPVAGTSFGGPPGEGASNGGPLVVGPFDMPVVGASDGDALEKLPLDISLPGKGPSDVGPPGAGLPGAAPPGVDLSNVGASDRGASGEGASDGCPPDVGPFDICLLSIDPPVVGASDGGPPDEGASNGGPPDTDSFGGDPLCASPLGIDPPIVDASDGDPFGAGSPDEDPSNENASGEGASGESPPCSDVSCKGPSSAGASIGCSLDNGASTPSSPDTFLSNVFPSDKSSPDAFSPDVAALVTLPSGKDPFDISPPIVALLDVSPLGKTSSDAYSSGISPGIFEKSFPLVKLQTIEYM", "length": 1504 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2S0-1", "protein_name": "Probable mannose-1-phosphate guanylyltransferase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKALILVGGFGTRLRPLTLSLPKPLVDFANKPMILHQIEALKAIGVDEVVLAINYEPEQLLVMSKFSNDVEATLGIKITCSQETEPLGTAGPLALARDKLVDGSGQPFFVLNSDVISDYPLEEMIAFHNAHGGEASIMVTKVDEPSKYGVVVMEEATGRVERFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEIFPQIAEAEKLYAMLLPGFWMDIGQPRDYITGLRLYLDSLRKKSPSKLATGPHILGNVLVDETAEIGEGCLIGPNVAIGPGCVVESGVRLSHCTVMRGVHVKRYACISSSIIGWHSTVGQWARVENMSILGKNVYVCDEIYCNGGVVLHNKEIKSDILKPDIVM", "length": 364 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9NR96-1", "protein_name": "Toll-like receptor 9", "gene_name": "TLR9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGFCRSALHPLSLLVQAIMLAMTLALGTLPAFLPCELQPHGLVNCNWLFLKSVPHFSMAAPRGNVTSLSLSSNRIHHLHDSDFAHLPSLRHLNLKWNCPPVGLSPMHFPCHMTIEPSTFLAVPTLEELNLSYNNIMTVPALPKSLISLSLSHTNILMLDSASLAGLHALRFLFMDGNCYYKNPCRQALEVAPGALLGLGNLTHLSLKYNNLTVVPRNLPSSLEYLLLSYNRIVKLAPEDLANLTALRVLDVGGNCRRCDHAPNPCMECPRHFPQLHPDTFSHLSRLEGLVLKDSSLSWLNASWFRGLGNLRVLDLSENFLYKCITKTKAFQGLTQLRKLNLSFNYQKRVSFAHLSLAPSFGSLVALKELDMHGIFFRSLDETTLRPLARLPMLQTLRLQMNFINQAQLGIFRAFPGLRYVDLSDNRISGASELTATMGEADGGEKVWLQPGDLAPAPVDTPSSEDFRPNCSTLNFTLDLSRNNLVTVQPEMFAQLSHLQCLRLSHNCISQAVNGSQFLPLTGLQVLDLSHNKLDLYHEHSFTELPRLEALDLSYNSQPFGMQGVGHNFSFVAHLRTLRHLSLAHNNIHSQVSQQLCSTSLRALDFSGNALGHMWAEGDLYLHFFQGLSGLIWLDLSQNRLHTLLPQTLRNLPKSLQVLRLRDNYLAFFKWWSLHFLPKLEVLDLAGNQLKALTNGSLPAGTRLRRLDVSCNSISFVAPGFFSKAKELRELNLSANALKTVDHSWFGPLASALQILDVSANPLHCACGAAFMDFLLEVQAAVPGLPSRVKCGSPGQLQGLSIFAQDLRLCLDEALSWDCFALSLLAVALGLGVPMLHHLCGWDLWYCFHLCLAWLPWRGRQSGRDEDALPYDAFVVFDKTQSAVADWVYNELRGQLEECRGRWALRLCLEERDWLPGKTLFENLWASVYGSRKTLFVLAHTDRVSGLLRASFLLAQQRLLEDRKDVVVLVILSPDGRRSRYVRLRQRLCRQSVLLWPHQPSGQRSFWAQLGMALTRDNHHFYNRNFCQGPTAE", "length": 1032 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9QUG3-1", "protein_name": "Prion-like protein doppel", "gene_name": "Prnd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNRLGTWWVAILCMLLASHLSTVKARGIKHRFKWNRKVLPSSGGQITEARVAENRPGAFIKQGRKLDIDFGAEGNRYYAANYWQFPDGIYYEGCSEANVTKEMLVTSCVNATQAANQAEFSREKQDSKLHQRVLWRLIKEICSAKHCDFWLERGAALRVAVDQPAMVCLLGFVWFIVK", "length": 179 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9SAC9-1", "protein_name": "AP-1 complex subunit mu-1", "gene_name": "AP1M1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAGAASALFLLDIKGRVLVWRDYRGDVTAAQAERFFTKLIETEGDSQSNDPVAYDNGVTYMFVQHSNIYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQFTEARILSEFIKTDAYRMEVTQRPPMAVTNSVSWRSEGLKFKKNEVFLDVIESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRILLEAQGRAIKGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAHIERHSRSRVEMLVKARSQFKDRSYATSVEIELPVPTDAYNPDVRTSLGSAAYAPEKDALVWKIQYFYGNKEHTLKADFHLPSIAAEEATPERKAPIRVKFEIPKFIVSGIQVRYLKIIEKSGYQAHPWVRYITMAGEYELRLM", "length": 428 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCN2-1", "protein_name": "Cytochrome P450 71B31", "gene_name": "CYP71B31", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSMFLGLLFLFPLFFILFKNLLPPRKKLPPGPTGLPLIGNLHQLGRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISNYAQTQTLVDLRKSLFSYTASIIFREAFGQNFRECDYINMDKLEELVQETETNVCSLAFTDFFPRGLGWLVDRISGQHSRMNIAFSKLTTFFEDVIDELLKTKQLDDHSDLVTAMLDVINRPRKFGSLKITYDHLIAMMSDVVLAGVNAGTVTMIWTMTELTRHPRVMKKLQEEIRATLGPNKERITEEDLEKVEYLNLVIKESFRLHPPAPLLLPRETMSDIEIQGYHIPKNAHVKINTYAIGRDPKRWTNPEEFNPERFLNTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSLPSGMTIKDIDMEEDGALNIAKKVPLQLVPTLP", "length": 498 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJ39-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 6", "gene_name": "CYP705A6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAAILSVDFQNCFIFIVLCLFSLFCYSLFFKKPKHPRGCDLPPSPPSLPIIGHLHLLFSPLTHKSLQKLSSKYGHLLHLRIFNVPVILVSSASVAYEIFRAHDVNVSSRGVAAIDESLLFGSSGIITAPYGDYWKFMKKLIATKLLRPQSLESSRGIRGEELTRFYNSLLDKARMTESVEISTEAMKLVNNTLCRMSMGRSFSEENGEAEKIRGLVGESYALTKKMFLASLLRKPLKKLRISLFEKEIMGVSDRLDELLERILVEHEEKLHEEHQGTDMMDVLLAASGDENAEYNITRNHIKSFFVEIFIGATDTSVQTTQWTMAEILNHPNVLERLRKDIDSVVGKTRLIHETDLPNLPYLQAVVKEGLRLHPPGPLLVRTFQERCKIKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLRAPPMGGSLDKFIEFS", "length": 442 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMT4-1", "protein_name": "Large ribosomal subunit protein eL13y", "gene_name": "RPL13C", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQTLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKAKLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKIRLEGINKRHAGVRAKRAAEAEKEEKK", "length": 206 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSB4-1", "protein_name": "26S proteasome regulatory subunit 7 homolog B", "gene_name": "RPT1B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIIRDIMEDPENEGPHNMRSDFEPLLSVLRLRDYETGDIIEFDSTEASEEALSDITEFGSTEASEAHFEEPYSARIKKVEKEINELAEKICNLGIKESDTGLAPPNQWDLVSDKQMMQEEQPLLVATCTQIISPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKVVKGYQKFSATPKYMAYYI", "length": 464 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVM4-1", "protein_name": "Serine hydroxymethyltransferase 5", "gene_name": "SHM5", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEPVYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYSEGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDFRPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTTSTHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALAVALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKVEKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLHRAVTITLDIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGFFISESRND", "length": 470 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SWH4-1", "protein_name": "Syntaxin-42", "gene_name": "SYP42", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATRNRTTVYRKHRDACKSARAPLSLSASDSFGGPVIEMVSGSFSRSNHSSYAPLNSYDPGPSSSDAFTIGMPPAWVDDSEEITFNIQKVRDKMNELAKAHSKALMPTFGDNKGIHREVEMLTHEITDLLRKSEKRLQMLSTRGPSEESNLRKNVQRSLATDLQNLSMELRRKQSTYLKRLQQQKEGQDEVDLEFNVNGKMSRLDEEDELGGMGFDEHQTIKLKEGQHVSAEREREIQQVLGSVNDLAQIMKDLSALVIDQGTIVDRIDYNVQNVSTSVEEGYKQLQKAERTQREGAMVKCATILLVLCLIMIVLLILKNILF", "length": 323 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYN6-1", "protein_name": "SOUL heme-binding family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEAALSIFKLSFLLTLLSGGSDLIDSLPPNCNRAECPSYEVVHAGNGYEIHRYNTTVWISTEPIQDISLNEASGNGWNQLSDYMNGNNDYHQRIEIALPYITQVSQNLSTFIVSFFVPKAFQPDPPPGNNLHVQRWDSRYVAVKQISGYVADHKIGKQVAELKASLQGTVWAKAIEKSRETGGVGSAWAYTVAQFSWPFQWSQRVNEIWFPFEMEDEETVSIVTQ", "length": 225 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZB4-1", "protein_name": "Putative DEAD-box ATP-dependent RNA helicase 43", "gene_name": "RH43", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEVDDGYVEYVPVEERLAQMKRKVVEEPGKGMMEHLSDKKKLMSVGELARGITYTEPLSTWWKPPLHVRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAELNGPMEETETIANASGVKGCAYCGGLGHRILQCPKFEHQKSVAISSSRKDHFGSDGYRGEV", "length": 542 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0E0-1", "protein_name": "Putative ATPase, plasma membrane-like", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATGDSLEDIKIEIDDDLEKIPIEEVFKKLRCSREGLSGAEGKERLKIFGPNKLENKKKEHITLRFFALMFKPLSWVIQAAAIMAMLFANGDGRQLFLGIVCLLIVNTIICYLKEDDAANVVAMARAGLSPKTKVLRDGKWSEQEASILVPGDIVSIKPGDIIPCDARLLEGDTLKVDQSALTGEFGPITKGPGEEVFSGTTCKQGEMEAVVIATGVHTFSGTTAHLVDNRTNKVGHFRKVVTEIENLCVISIAIGISIEVIVMYWIQRRNFSDVINNLLVLVIGGIPLAMPTVLYVIMVTGSLRLYRTGTITQRITAIEDMAAIDVLCSDKTGTLTLNKLSVDKNLIKVYSKDVEKEQVLLLAARASRIENRDGIDAAMVGSLADPKEARAGIREVHFNLVDKRTALTYIDGNGDWHRVSKGTPEQILDLCNARDDLRKSVHSAIRNYAERGLKSFAISWFRNTNCNTVFFFPYQLCSEHKYHIVNKLQERHICGLIGDGVDDVPSLKKADVGIAVANATEAARAASDIVLTEPGLSVIIDAVLASRAILQQMKHYTIYAVSITIRVVFGFMFIALIWKFDFSPFMVLAIALLNEETTKAITMDNVTNPSPTPDSLKLKEIFATGVVYGSYMALITVVFFWAAYRTDIFPRTFHVRDLRGNEAEMMCALYLQVSIMSQALFFVIQSRSWFFVERPGELLFLSFVTVQTIATTLAVYASWETARIEGIGWSWAGVIWLYNIIFFFPLDIMKFGIRYILTGKAQSLFDNMVHLVLNSYAKLSNGIYNHTQADHTYSLLEVSTPPSQDLRGVGWV", "length": 813 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0H7-1", "protein_name": "Histone H2A.8", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVCNTNILKDVSTKISAFENVRMIMVEGEMFQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITPRHLQLAIRGDEELDTLIKGTIIGGSVIPHIH", "length": 118 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VXF6-1", "protein_name": "Calnexin 14D", "gene_name": "Cnx14D", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MAWKMLFAILLLLSAAKTGYLAPESENSVEDVQIEPGAIYGDEKFAYKSPVIDAEKFYFADHFDDVEASRKRWVLSQAKKNDIADEIAKYDGIWNWESPQRIFWANDLGLVLKSKAKHAAIAAPFRQPFDFKSNKPLVVQYELTLQEGQDCGGSYLKLLSAGKGTEQLNRFNDKTPYTIMFGPDKCGNNLKMHFIFRHVNPLNGNITEKHCKKPNARLGVPFTDKLPHLYQLVVRPDNSFEIRLDHKIIKEGSLLTDFVPPVNPPAEIDDPNDHKPESWDERKKIPDPNAHKPEDWDEDAPPHLPDTDAVMPNGWLEDEPDMIFDPTAIEPEDWNSEIDGEWEAPLVENPVCKKAPGCGKWKAPLIPNPNYKGKWSAPMIENPNNQGKWAPRKIANPDFFEDLKPFQMTPINAVGLELWSMSSDILFDNLIITDDVELARDFAANSFDIKRLYIDRESFGNKVVELARANRAIWGIVIVAIAVPVAITIFCKFGLGPSRVAAAKKAAAAAAKKTDDPQPDDDLGAEEEEKLEKGKKEEEKKEEEEEEEKEENKEEKKEEEKDDEKEMKDCEEEEDDEEKDDEEKTDERAAGDTNKESTPLSASPKKNQKSYLDNNEDEEDTLKNKEPTPKKRKRKALKE", "length": 639 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W240-1", "protein_name": "K Homology domain-containing protein", "gene_name": "cg3927", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "METPSELTEKQNQDQPTYQPRLNEVAQKFLADLDAERKRLSAEFPLCALLIDESVDRVYSTGRIPGKEPFADVYQQKPMKIIQKVFVPVNKFPKFNFTGKILGPKGNSLRRLQEETHCKIVIKGRNSMRDRNKEEELRSSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLIPDDNDDVWHEQQRELMEMNPKSAKKSNGLNMAPYRSNFDKAIGAIRNRAPKYNNQIRRVTENPREVAYMEEVEYDYDEHLMFCSPVVRL", "length": 270 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W4G6-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG2861", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MDYEIIEFVRRHISHIDISAETRMRYPDPISNNNFDWNSIGLGEQEDAIGQDQQSQALNENANNVSPDVPPSTIAEPTLEPSTIEGNQGQNPRIISSMPDMMPMANSFNPLININQEAGVVINTGINSIDNGLPSTYSEHISQPTNTESTRNMNSSIFDIPSDLDNNSSNESGDEVTQPTAKQSKINANFVCKIESDTNMDKLPTTSNNTNDKPPNNTDSDSDIISISDLIEDLNLDFNQLPITSCDVETHPADTQSNIDANLPYDLISAINMDFVNPANRTYMSAANSTRGTAYKIRKPRTVKRIIKAPSKSNIGKLLREAAKKENAAAGTQRPKKATSTITSSVQNFPNPNNWPACPFPMQNGTMPADEPNDLMPTVSQSLTVPAAQNRPIQTIGKIIKPPVKRTYTKRANKTNNTNIPNKNSTGVIQSNGVAPTIRQGLVEPGGTNILMPWNRQIPMVSVAENPRVQTIDKIIVPPPKRTYKKRVNKTVNTNQSSESAVGDGAPSAPIQSIPKVRKPRGPGKKTAKMVPGQESQQDIPLGVPPNGEAPQTSSQAPVPRVKRAYRKRANNTNNTNILNVNSTGVMESNGGGPTIPNSQQIPNVAVVLNLPIQPIKPKAPRKPRAKKVCNQQPGTDIPFGVSAQGQTAQIKPKPKPRAPRVPKEPKAPKEPKAPKVPKAPRVPKAPRVPKAPRVPKAPRVPKPPKEPKPPKEPKPPKQPKAPRVPKEPKPPKVPKEPKAPRAPRAPRVPKAPKEPKVPKIPKNPRVPKAPRQPKASMNKIQNTVKVPLPIEPVPLETPTYINPINTPVQSTVGEILALGSMPPISPIKFPVLFDEHAAQHTVANSNMPQSSLPTLDIPQLPTRNNKQPSTKSAEDTEILGLGKNKNAMKSDGRIKQGRVSKPSLRFSPSSSSLRPVVRSLSSSSSSSSSWSSCTTCSTCSSCSTCSSSSDSSQSSRSRNRKRRSPKVPIPHKLFESNGEINFQLGQPTRLESPSPPPPVPMQACGTFEEHLTDLTLVRVHAISPLRSPTYDFDFDLPEPMLSEESSSSSSESNDESNVNCQMAPNSQNVSMHFLKVMVFYNCYVLFQQLEKKHQSLFEESSSSSSSESNDETNVNCQMTPNSQNQKKLQSAPIREPSPDQPPEAASRSSNGGTIGPCNLKAFRRDFMISNAENTGFTNPSELNLKKCATKVCTPMERNSGSQLPIQNRFILPNSNKEEGKMNVEPVMPKHKPSRIPIRTKTPIALNLMKEPEDNARKPKNILKPFFSNADVNPCSSTDYEPNFKPCESPLPAKQNDFKLINKDKKSWVSHYQEQESQELKENSFFYAKFNLPNIPKKSFKDSKANAERRCTKTFEDVRKEAQQSRYTKAINKRQNKKAMLESALGNAITEDPTVNCNLADNPNDQVEMPRNPDIVEPTVKPVKFKAFVSASIKPKSSKKRKLMNSASNSKLFKFKIFESEVNKDENEEEDVIPDNLIIPVKRKQNISELLDMQPSTSKAAATITSQPKIAQLKRMPSKLLNEKMKSYAKKRSNDDENKDTKNTGMHMHRYKIPKLSANKPQNTSTTQSPTRGFSRLPGMYQEPNFQNAQHPFSTRGYYPYQRAYPLHRPTSQYHMNQPQPLRLHHSMYVDAEPSFESVFPAPRYQPYNINPSMRHHYSYPGEPSPSTYPMGGIPFQNNNTLYPPMRNDLCYPRGRLNYPVRNLPPMNSQGTYPPNYPQNFLPNYPPSRQFLLSMQRLADINKQIASGSIESVGGFIQMAYAGRKYRTLKDLRERTMLSKDSLRKIFKCMCKIKRPKWRISKFYLYAYWCEISGIPQSSEFGKPLELNAAYRKVISSYAENKFLRMESLMEKTGFGKSKLKRVLKMIGRKRSTKWRLLNYRKPLIHLHRSQDM", "length": 1893 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W6A5-1", "protein_name": "Green-sensitive opsin-1", "gene_name": "opn1mw1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNGTEGSNFYIPMSNRTGLVRSPYDYTQYYLAEPWKFKALAFYMFLLIIFGFPINVLTLVVTAQHKKLRQPLNYILVNLAFAGTIMVIFGFTVSFYCSLVGYMALGPLGCVMEGFFATLGGQVALWSLVVLAIERYIVVCKPMGSFKFSANHAMAGIAFTWFMACSCAVPPLFGWSRYLPEGMQTSCGPDYYTLNPEYNNESYVMYMFSCHFCIPVTTIFFTYGSLVCTVKAAAAQQQESESTQKAEREVTRMVILMVLGFLFAWVPYASFAAWIFFNRGAAFSAQAMAVPAFFSKTSAVFNPIIYVLLNKQFRSCMLNTLFCGKSPLGDDESSSVSTSKTEVSSVSPA", "length": 349 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9XK79-1", "protein_name": "NADH-ubiquinone oxidoreductase chain 4L", "gene_name": "nad4L", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLIDLILIAIYVIGISGLIFNKNNIINILIISELNLGTLGMLFVLASVELNDILGELSGLYILTFTAAESAIGLAIVVILYSKTGIINIRHLNKLKG", "length": 98 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9Y2B0-1", "protein_name": "Protein canopy homolog 2", "gene_name": "CNPY2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKGWGWLALLLGALLGTAWARRSQDLHCGACRALVDELEWEIAQVDPKKTIQMGSFRINPDGSQSVVEVPYARSEAHLTELLEEICDRMKEYGEQIDPSTHRKNYVRVVGRNGESSELDLQGIRIDSDISGTLKFACESIVEEYEDELIEFFSREADNVKDKLCSKRTDLCDHALHISHDEL", "length": 182 }, "evidence": [ { "id": "A0A5G2QIN7", "url": "https://omabrowser.org/oma/group/A0A5G2QIN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9Z1X0-1", 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ENAH induces the formation of F-actin rich outgrowths in fibroblasts. Acts synergistically with BAIAP2-alpha and downstream of NTN1 to promote filipodia formation.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKM8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKM8#function" }, { "database": "UniProtKB", "id": "ARBA00056269", "url": "https://www.uniprot.org/uniprotkb/ARBA00056269#function" }, { "database": "UniProtKB", "id": "A0A287AF78", "url": "https://www.uniprot.org/uniprotkb/A0A287AF78#function" }, { "database": "UniProtKB", "id": "A0A5G2QI12", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI12#function" }, { "database": "UniProtKB", "id": "A0A5G2QNU8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNU8#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNU8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNU8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ENAH", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNU8", "locus": { "chromosome": "10", "start_pos": 13446426, "end_pos": 13609303, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000038646", "url": "https://www.ensembl.org/id/ENSSSCG00000038646" } ] } } ], "crossref": [ { "id": "A0A5G2QNU8", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QNU8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000038646", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000038646", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd01207", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01207", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd22185", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22185", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100525245", "url": "https://www.ncbi.nlm.nih.gov/gene/100525245", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000697", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000697", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014885", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014885", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038023", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038023", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR11202", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11202", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11202:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11202:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00568", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00568", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08776", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08776", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020920066", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920066", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZKM8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKM8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZKM8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKM8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AF78", "url": "https://www.uniprot.org/uniprotkb/A0A287AF78", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AF78-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AF78-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QI12", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI12", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QI12-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI12-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QNU8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNU8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QNU8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNU8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9L6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9L6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9L6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9L6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FGB1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGB1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FGB1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGB1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S8S4", "url": "https://www.uniprot.org/uniprotkb/F1S8S4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S8S4-1", "url": "https://www.uniprot.org/uniprotkb/F1S8S4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSEQSICQARAAVMVYDDANKKWVPAGGSTGFSRVHIYHHTGNNTFRVVGRKIQDHQVVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALEVLNSQEAGPTLPRQNSQLPAQVQNGPSQEELEIQRRQLQEQQRQKELERERLERERMERERLERERLERERLERERLEQEQLERERQERERQERQERLERERQERERLERLERLDRERQERERQEQLEREQLEWERERRVSSAAAPASVETPLNSVLGDSSASEPGLQAASQPAETPAQQGIVLGPPAPPPPPPLPPGPAQASAILPPPPGPPPPPPLPSSGPPPPPPPPPLPNQAPPPPPPPPAPPLPASGFFSGSMSEDNRPLTGLAAAIAGAKLRKVSRMEDGSFPSGVNAASSKTDTGRGNGPLPLGGSGLMEEMSALLARRRRIAEKGSTIETEQKEDKNEDSEPQTSKASSTSTPEPTRKPWERTNTMNGSKSPVISRRDSSRKNQIVFDNRSYDSLHRPKSAPSSQPSANGVQTEGLDYDRLKQDILDEMRKELTKLKEELIDAIRQELSKSNTA", "length": 571, "header": "tr|A0A5G2QNU8-1|A0A5G2QNU8_PIG Isoform 1 of Protein enabled homolog OS=Sus scrofa OX=9823 GN=ENAH PE=1 SV=1 CANONICAL=A0A5G2QNU8-1" }, "isoforms": [ { "isoform_ac": "A0A286ZKM8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKM8/entry", "sequence": { "sequence": "MSEQSICQARAAVMVYDDANKKWVPAGGSTGFSRVHIYHHTGNNTFRVVGRKIQDHQVVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALEVLNSQEAAQSKVTATQESTNLRCIFCVFYLGPTLPRQNSQLPAQVQNGPSQEELEIQRRQLQEQQRQKELERERLERERMERERLERERLERERLERERLEQEQLERERQERERQERQERLERERQERERLERLERLDRERQERERQEQLEREQLEWERERRVSSAAAPASVETPLNSVLGDSSASEPGLQAASQPAETPAQQGIVLGPPAPPPPPPLPPGPAQASAILPPPPGPPPPPPLPSSGPPPPPPPPPLPNQAPPPPPPPPAPPLPASGFFSGSMSEDNRPLTGLAAAIAGAKLRKVSRMEDGSFPSGVNAASSKTDTGRGNGPLPLGGSGLMEEMSALLARRRRIAEKGSTIETEQKEDKNEDSEPQTSKASSTSTPEPTRKPWERTNTMNGSKSPVISRPKSAPSSQPSANGVQTEGLDYDRLKQDILDEMRKELTKLKEELIDAIRQELSKSNTA", "length": 573, "header": "tr|A0A286ZKM8-1|A0A5G2QNU8_PIG Computationally mapped isoform of Protein enabled homolog OS=Sus scrofa OX=9823 GN=ENAH PE=1 SV=2 CANONICAL=A0A5G2QNU8-1" }, "locus": { "chromosome": "10", "start_pos": 13608875, "end_pos": 13449753, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062360.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062360.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032137.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032137.2" } ] } }, { "isoform_ac": "A0A287AF78-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AF78/entry", "sequence": { "sequence": "MSEQSICQARAAVMVYDDANKKWVPAGGSTGFSRVHIYHHTGNNTFRVVGRKIQDHQVVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALEVLNSQEAVFYLGPTLPRQNSQLPAQVQNGPSQEELEIQRRQLQEQQRQKELERERLERERMERERLERERLERERLERERLEQEQLERERQERERQERQERLERERQERERLERLERLDRERQERERQEQLEREQLEWERERRVSSAAPSSDSSLYNAPLPEYASCQPPSAPPPSYAKVISAPVSDASPDYAVVTALPPTSTPPTPPLRHSATRFATSLGSAFHPVLPHYATVPRPLNKGSRPSSPVNTPSPQPPAAKPCAWAASNFSPLPPSPPVMISSPPGKAAGPRPVLPVCVSSPGPQMPPSPTAPSGLLDSVPCPVSPPPTSGPAPPPPPPPLPSLVPLSHCGSQASPPPSTPLASTPSSKPSVLPSPSAAAPASVETPLNSVLGDSSASEPGLQAASQPAETPAQQGIVLGPPAPPPPPPLPPGPAQASAILPPPPGPPPPPPLPSSGPPPPPPPPPLPNQAPPPPPPPPAPPLPASGFFSGSMSEDNRPLTGLAAAIAGAKLRKVSRMEDGSFPSGVNAASSKTDTGRGNGPLPLGGSGLMEEMSALLARRRRIAEKGSTIETEQKEDKNEDSEPQTSKASSTSTPEPTRKPWERTNTMNGSKSPVISRPKSAPSSQPSANGVQTEGLDYDRLKQDILDEMRKELTKLKEELIDAIRQELSKSNTA", "length": 782, "header": "tr|A0A287AF78-1|A0A5G2QNU8_PIG Computationally mapped isoform of Protein enabled homolog OS=Sus scrofa OX=9823 GN=ENAH PE=1 SV=2 CANONICAL=A0A5G2QNU8-1" }, "locus": { "chromosome": "10", "start_pos": 13608875, "end_pos": 13449753, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040992.2", "url": "https://www.ensembl.org/id/ENSSSCT00000040992.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000042496.2", "url": "https://www.ensembl.org/id/ENSSSCP00000042496.2" } ] } }, { "isoform_ac": "A0A5G2QI12-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI12/entry", "sequence": { "sequence": "MSEQSICQARAAVMVYDDANKKWVPAGGSTGFSRVHIYHHTGNNTFRVVGRKIQDHQVVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALEVLNSQEAAQSKVTATQESTNLRCIFCGPTLPRQNSQLPAQVQNGPSQEELEIQRRQLQEQQRQKELERERLERERMERERLERERLERERLERERLEQEQLERERQERERQERQERLERERQERERLERLERLDRERQERERQEQLEREQLEWERERRVSSAAAPASVETPLNSVLGDSSASEPGLQAASQPAETPAQQGIVLGPPAPPPPPPLPPGPAQASAILPPPPGPPPPPPLPSSGPPPPPPPPPLPNQAPPPPPPPPAPPLPASGFFSGSMSEDNRPLTGLAAAIAGAKLRKVSRMEDGSFPSGVNAASSKTDTGRGNGPLPLGGSGLMEEMSALLARRRRIAEKGSTIETEQKEDKNEDSEPQTSKASSTSTPEPTRKPWERTNTMNGSKSPVISRPKSAPSSQPSANGVQTEGLDYDRLKQDILDEMRKELTKLKEELIDAIRQELSKSNTA", "length": 569, "header": "tr|A0A5G2QI12-1|A0A5G2QI12_PIG Computationally mapped isoform of Protein enabled homolog OS=Sus scrofa OX=9823 GN=ENAH PE=1 SV=2 CANONICAL=A0A5G2QNU8-1" }, "locus": { "chromosome": "10", "start_pos": 13608875, "end_pos": 13449753, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070256.2", "url": "https://www.ensembl.org/id/ENSSSCT00000070256.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063536.2", "url": "https://www.ensembl.org/id/ENSSSCP00000063536.2" } ] } }, { "isoform_ac": "A0A5G2QNU8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNU8/entry", "sequence": { "sequence": "MSEQSICQARAAVMVYDDANKKWVPAGGSTGFSRVHIYHHTGNNTFRVVGRKIQDHQVVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALEVLNSQEAGPTLPRQNSQLPAQVQNGPSQEELEIQRRQLQEQQRQKELERERLERERMERERLERERLERERLERERLEQEQLERERQERERQERQERLERERQERERLERLERLDRERQERERQEQLEREQLEWERERRVSSAAAPASVETPLNSVLGDSSASEPGLQAASQPAETPAQQGIVLGPPAPPPPPPLPPGPAQASAILPPPPGPPPPPPLPSSGPPPPPPPPPLPNQAPPPPPPPPAPPLPASGFFSGSMSEDNRPLTGLAAAIAGAKLRKVSRMEDGSFPSGVNAASSKTDTGRGNGPLPLGGSGLMEEMSALLARRRRIAEKGSTIETEQKEDKNEDSEPQTSKASSTSTPEPTRKPWERTNTMNGSKSPVISRRDSSRKNQIVFDNRSYDSLHRPKSAPSSQPSANGVQTEGLDYDRLKQDILDEMRKELTKLKEELIDAIRQELSKSNTA", "length": 571, "header": "tr|A0A5G2QNU8-1|A0A5G2QNU8_PIG Isoform 1 of Protein enabled homolog OS=Sus scrofa OX=9823 GN=ENAH PE=1 SV=1 CANONICAL=A0A5G2QNU8-1" }, "locus": { "chromosome": "10", "start_pos": 13608875, "end_pos": 13449753, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067509.1", "url": "https://www.ensembl.org/id/ENSSSCT00000067509.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065735.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065735.1" } ] } }, { "isoform_ac": "A0A5G2R9L6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9L6/entry", "sequence": { "sequence": "MWETSICQARAAVMVYDDANKKWVPAGGSTGFSRVHIYHHTGNNTFRVVGRKIQDHQVVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALEVLNSQEAGPTLPRQNSQLPAQVQNGPSQEELEIQRRQLQEQQRQKELERERLERERMERERLERERLERERLERERLEQEQLERERQERERQERQERLERERQERERLERLERLDRERQERERQEQLEREQLEWERERRVSSAAAPASVETPLNSVLGDSSASEPGLQAASQPAETPAQQGIVLGPPAPPPPPPLPPGPAQASAILPPPPGPPPPPPLPSSGPPPPPPPPPLPNQAPPPPPPPPAPPLPASGFFSGSMSEDNRPLTGLAAAIAGAKLRKVSRMEDGSFPSGVNAASSKTDTGRGNGPLPLGGSGLMEEMSALLARRRRIAEKGSTIETEQKEDKNEDSEPQTSKASSTSTPEPTRKPWERTNTMNGSKSPVISRRDSSRKNQIVFDNRSYDSLHRPKSAPSSQPSANGVQTEGLDYDRLKQVGPQWQLRFICACSFCNIYLTCTHSTDCAYI", "length": 571, "header": "tr|A0A5G2R9L6-1|A0A5G2QNU8_PIG Computationally mapped isoform of Protein enabled homolog OS=Sus scrofa OX=9823 GN=ENAH PE=1 SV=2 CANONICAL=A0A5G2QNU8-1" }, "locus": { "chromosome": "10", "start_pos": 13527558, "end_pos": 13453963, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068128.2", "url": "https://www.ensembl.org/id/ENSSSCT00000068128.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070819.2", "url": "https://www.ensembl.org/id/ENSSSCP00000070819.2" } ] } }, { "isoform_ac": "A0A8W4FGB1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGB1/entry", "sequence": { "sequence": "MWETSICQARAAVMVYDDANKKWVPAGGSTGFSRVHIYHHTGNNTFRVVGRKIQDHQVVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALEVLNSQEAGPTLPRQNSQLPAQVQNGPSQEELEIQRSGLLDSVPCPVSPPPTSGPAPPPPPPPPPPPPPPPPPPPLPSLVPLSHCGSQASPPPSTPLASTPSSKPSVLPSPSAAAPASVETPLNSVLGDSSASEPGLQAASQPAETPAQQGIVLGPPAPPPPPPLPPGPAQASAILPPPPGPPPPPPLPSSGPPPPPPPPPLPNQAPPPPPPPPAPPLPASGFFSGSMSEDNRPLTGLAAAIAGAKLRKVSRMEDGSFPSGVNAASSKTDTGRGNGPLPLGGSGLMEEMSALLARRRRIAEKGSTIETEQKEDKNEDSEPQTSKASSTSTPEPTRKPWERTNTMNGSKSPVISRRDSSRKNQIVFDNRSYDSLHRPKSAPSSQPSANGVQTEGLDYDRLKQVGPQWQLRFICACSFCNIYLTCTHSTDCAYI", "length": 540, "header": "tr|A0A8W4FGB1-1|A0A5G2QNU8_PIG Computationally mapped isoform of Protein enabled homolog OS=Sus scrofa OX=9823 GN=ENAH PE=1 SV=1 CANONICAL=A0A5G2QNU8-1" }, "locus": { "chromosome": "10", "start_pos": 13527558, "end_pos": 13453963, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000094657.1", "url": "https://www.ensembl.org/id/ENSSSCT00000094657.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077349.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077349.1" } ] } }, { "isoform_ac": "F1S8S4-1", "url": "https://www.uniprot.org/uniprotkb/F1S8S4/entry", "sequence": { "sequence": "MSEQSICQARAAVMVYDDANKKWVPAGGSTGFSRVHIYHHTGNNTFRVVGRKIQDHQVVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALEVLNSQEAAQSKVTATQESTNLRCIFCGPTLPRQNSQLPAQVQNGPSQEELEIQRRQLQEQQRQKELERERLERERMERERLERERLERERLERERLEQEQLERERQERERQERQERLERERQERERLERLERLDRERQERERQEQLEREQLEWERERRVSSAAAPASVETPLNSVLGDSSASEPGLQAASQPAETPAQQGKQPPPFFSRI", "length": 319, "header": "tr|F1S8S4-1|A0A5G2QNU8_PIG Computationally mapped isoform of Protein enabled homolog OS=Sus scrofa OX=9823 GN=ENAH PE=1 SV=5 CANONICAL=A0A5G2QNU8-1" }, "locus": { "chromosome": "10", "start_pos": 13608875, "end_pos": 13468799, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011872.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011872.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011569.5", "url": "https://www.ensembl.org/id/ENSSSCP00000011569.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S8S4", "url": "https://www.uniprot.org/uniprotkb/F1S8S4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "actin binding", "id": "GO:0003779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003779", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNU8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNU8" } ], "pmid": "" }, { "name": "SH3 domain binding", "id": "GO:0017124", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017124", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNU8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNU8" } ], "pmid": "" }, { "name": "WW domain binding", "id": "GO:0050699", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050699", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNU8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNU8" } ], "pmid": "" }, { "name": "profilin binding", "id": "GO:0005522", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005522", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNU8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNU8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 7, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNU8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNU8" } ], "pmid": "" }, { "name": "cytoskeleton", "id": "GO:0005856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005856", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNU8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNU8" } ], "pmid": "" }, { "name": "focal adhesion", "id": "GO:0005925", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005925", 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"A0A5G2QNU8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNU8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "actin polymerization-dependent cell motility", "id": "GO:0070358", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070358", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNU8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNU8" } ], "pmid": "" }, { "name": "actin polymerization or depolymerization", "id": "GO:0008154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008154", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNU8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNU8" } ], "pmid": "" }, { "name": "axon guidance", "id": "GO:0007411", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007411", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNU8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNU8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 43, "end_pos": 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"length": 1642, "header": "tr|A0A5G2QM40-1|A0A5G2QM40_PIG Isoform 1 of Homeobox protein cut-like OS=Sus scrofa OX=9823 GN=CUX1 PE=1 SV=1 CANONICAL=A0A5G2QM40-1" }, "isoforms": [ { "isoform_ac": "A0A286ZM59-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM59/entry", "sequence": { "sequence": "MERAAGPLRNAYSDPARESKAPGAPGAPLDCGVRGCGPSAEPRAPRGAHAGAPHPAPEPLRCPGGAFLPAIPHPEERRALGVRPGPASSALAAPGQPRDSARWMLCVVEAELKRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEVRRRFCPGLRRGGQERGIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLHDIETENQKLRETLDEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKVQTLQTALEKTRTELFDLKTKYDEEITAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQADYEEVKKELKPLEVLLLEKNRSLQSENAALRISNSDLSGSARRKGKDQPESRRPGPLPASPPSQLPRNTGEQASNTNGTHQFSPAGLTQDFFSSALASPSLPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFSTGPYSTNSISSQSPLQQSPDVNGMAPSPSQSESAGSVSEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRGNITTRIRASETGSDEAIKSILEQAKRELQVQKTAEPAQPSSTASGGNSDDAIRSILQQARREMEAQQAALDPALKQAPLSQADLTILTPKLIAPAPTSSVSSYSPLAISLKKPPSAPEPSAPAPPNALALKKEPQDAPGLDLPGAADSAQGVLRHGKSELGRGGSGGVWKDHWWGAVQPERKSSAPPEDPKAEEAGGGGCGSSGGKEKGGGQARAERGQLQGPSSAEYWKDWPSAESPYSQGSELSLTGASRSETPQNSPLPSSPIVPLSKPTKPSVPPLTPEQYEIYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQGVLPVQGQQQGPVLHSVTSLQDPLQQGCVSSESTPKTSASCSPAPESPMSSSESVKSLTELVQQPCPPIDTSKDGKPPEPSDPPASDSSQPATPLPLSGHSALSIQELVAMSPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEPPSAGIDYSQGASPQPQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRYGSALSAAKSQLPGRVPAAQGKGRRAL", "length": 1390, "header": "tr|A0A286ZM59-1|A0A5G2QM40_PIG Computationally mapped isoform of Homeobox protein cut-like OS=Sus scrofa OX=9823 GN=CUX1 PE=1 SV=2 CANONICAL=A0A5G2QM40-1" }, "locus": { "chromosome": "3", "start_pos": 9637593, "end_pos": 9318642, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039046.3", "url": "https://www.ensembl.org/id/ENSSSCT00000039046.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032553.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032553.2" } ] } }, { "isoform_ac": "A0A287AWG4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AWG4/entry", "sequence": { "sequence": "MERAAGPLRNAYSDPARESKAPGAPGAPLDCGVRGCGPSAEPRAPRGAHAGAPHPAPEPLRCPGGAFLPAIPHPEERRALGVRPGPASSALAAPGQPRDSARWMLCVVEAELKRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEVRRRFCPGLRRGGQERGIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLHDIETENQKLRETLDEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKVQTLQTALEKTRTELFDLKTKYDEEITAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQADYEEVKKELKPLEVLLLEKNRSLQSENAALRISNSDLSGSARRKGKDQPESRRPGPLPASPPSQLPRNTGEQASNTNGTHQFSPAGLTQDFFSSALASPSLPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFSTGPYSTNSISSQSPLQQSPDVNGMAPSPSQSESAGSVSEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQSLNRLFQEVPKRRNGSEGNITTRIRASETGSDEAIKSILEQAKRELQVQKTAEPAQPSSTASGGNSDDAIRSILQQARREMEAQQAALDPALKQAPLSQADLTILTPKLIAPAPTSSVSSYSPLAISLKKPPSAPEPSAPAPPNALALKKEPQDAPGLDLPGAADSAQGVLRHGKSELGRGGSGGVWKDHWWGAVQPERKSSAPPEDPKAEEAGGGGCGSSGGKEKGGGQARAERGQLQGPSSAEYWKDWPSAESPYSQGSELSLTGASRSETPQNSPLPSSPIVPLSKPTKPSVPPLTPEQYEIYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQGVLPVQGQQQGPVLHSVTSLQDPLQQGCVSSESTPKTSASCSPAPESPMSSSESVKSLTELVQQPCPPIDTSKDGKPPEPSDPPASDSSQPATPLPLSGHSALSIQELVAMSPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEPPSAGIDYSQGASPQPQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGSQGQAGASDSPSARSGRAAPSSEGDSCDGVEAAEGPGPADAEESGGPAAAAKSQGGPAEAAAAPEEREEAPRPAEKAEPPPSGTPGPDATDDEGRPRAPPPPPPPPPPPPPPEGPADGPGPVPNPAAAPAAGEDAATSAAPPGEGPCRARDGADRSSALPSTSAPAAARRASSLQSLFGLPEAAGARDSRDNPLRKKKAANLNSIIHRLEKAASREEPIEWEF", "length": 1623, "header": "tr|A0A287AWG4-1|A0A5G2QM40_PIG Computationally mapped isoform of Homeobox protein cut-like OS=Sus scrofa OX=9823 GN=CUX1 PE=1 SV=3 CANONICAL=A0A5G2QM40-1" }, "locus": { "chromosome": "3", "start_pos": 9644511, "end_pos": 9318642, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037871.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037871.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000048247.3", "url": "https://www.ensembl.org/id/ENSSSCP00000048247.3" } ] } }, { "isoform_ac": "A0A5G2QM40-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM40/entry", "sequence": { "sequence": "MERAAGPLRNAYSDPARESKAPGAPGAPLDCGVRGCGPSAEPRAPRGAHAGAPHPAPEPLRCPGGAFLPAIPHPEERRALGVRPGPASSALAAPGQPRDSARWMLCVVEAELKRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDLRKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLHDIETENQKLRETLDEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKVQTLQTALEKTRTELFDLKTKYDEEITAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQADYEEVKKELNILKSMEFAPSEGAGTQDASRPLEVLLLEKNRSLQSENAALRISNSDLSGSARRKGKDQPESRRPGPLPASPPSQLPRNTGEQASNTNGTHQFSPAGLTQDFFSSALASPSLPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFSTGPYSTNSISSQSPLQQSPDVNGMAPSPSQSESAGSVSEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQSLNRLFQEVPKRRNGSEGNITTRIRASETGSDEAIKSILEQAKRELQVQKTAEPAQPSSTASGGNSDDAIRSILQQARREMEAQQAALDPALKQAPLSQADLTILTPKLIAPAPTSSVSSYSPLAISLKKPPSAPEPSAPAPPNALALKKEPQDAPGLDLPGAADSAQGVLRHGKSELGRGGSGGVWKDHWWGAVQPERKSSAPPEDPKAEEAGGGGCGSSGGKEKGGGQARAERGQLQGPSSAEYWKDWPSAESPYSQGSELSLTGASRSETPQNSPLPSSPIVPLSKPTKPSVPPLTPEQYEIYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQGVLPVQGQQQGPVLHSVTSLQDPLQQGCVSSESTPKTSASCSPAPESPMSSSESVKSLTELVQQPCPPIDTSKDGKPPEPSDPPASDSSQPATPLPLSGHSALSIQELVAMSPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEPPSAGIDYSQGASPQPQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGSQGQAGASDSPSARSGRAAPSSEGDSCDGVEAAEGPGPADAEESGGPAAAAKSQGGPAEAAAAPEEREEAPRPAEKAEPPPSGTPGPDATDDEGRPRAPPPPPPPPPPPPPPEGPADGPGPVPNPAAAPAAGEDAATSAAPPGEGPCRARDGADRSSALPSTSAPAAARRASSLQSLFGLPEAAGARDSRDNPLRKKKAANLNSIIHRLEKAASREEPIEWEF", "length": 1642, "header": "tr|A0A5G2QM40-1|A0A5G2QM40_PIG Isoform 1 of Homeobox protein cut-like OS=Sus scrofa OX=9823 GN=CUX1 PE=1 SV=1 CANONICAL=A0A5G2QM40-1" }, "locus": { "chromosome": "3", "start_pos": 9644511, "end_pos": 9318642, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069971.2", "url": "https://www.ensembl.org/id/ENSSSCT00000069971.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065942.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065942.1" } ] } }, { "isoform_ac": "A0A5G2QSG4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QSG4/entry", "sequence": { "sequence": "MAANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDLRKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKVQTLQTALEKTRTELFDLKTKYDEEITAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQADYEEVKKELNILKSMEFAPSEGAGTQDASRPLEVLLLEKNRSLQSENAALRISNSDLSGRCAELQVHVTEVMATAAEQRELIARLEQDLSTIQSIQRPDAEGAAELGLEKIPEPIKEATALFYGPSAPASGTLPEGQVDSLLSIISSQRERFRARNQELEAENRLAQHTIQALQSELDSLRADNIKLYEKIKFLQSYPGRGGGSDDTELRYSTQYEERLDPFSSFSKRERQRKYLSLSPWDKATLSMGRLVLSNKMARTIGFFYTLFLHCLVFLVLYKLAWSESVERDCATFCAKKFADHLHKFHENDHGAAAGDLWQ", "length": 632, "header": "tr|A0A5G2QSG4-1|A0A5G2QM40_PIG Computationally mapped isoform of Homeobox protein cut-like OS=Sus scrofa OX=9823 GN=CUX1 PE=1 SV=1 CANONICAL=A0A5G2QM40-1" }, "locus": { "chromosome": "3", "start_pos": 9669163, "end_pos": 9317328, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083977.1", "url": "https://www.ensembl.org/id/ENSSSCT00000083977.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067865.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067865.1" } ] } }, { "isoform_ac": "A0A5G2RAC2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RAC2/entry", "sequence": { "sequence": "MAANVGSMFQYWKRFDLQQLQDLRKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLHDIETENQKLRETLDEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKVQTLQTALEKTRTELFDLKTKYDEEITAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQADYEEVKKELNILKSMEFAPSEGAGTQDASRPLEVLLLEKNRSLQSENAALRISNSDLSGRCAELQVHVTEVMATAAEQRELIARLEQDLSTIQSIQRPDAEGAAELGLEKIPEPIKEATALFYGPSAPASGTLPEGQVDSLLSIISSQRERFRARNQELEAENRLAQHTIQALQSELDSLRADNIKLYEKIKFLQSYPGRGGGSDDTELRYSTQYEERLDPFSSFSKRERQRKYLSLSPWDKATLSMGRLVLSNKMARTIGFFYTLFLHCLVFLVLYKLAWSESVERDCATFCAKKFADHLHKFHENDHGAAAGDLWQ", "length": 639, "header": "tr|A0A5G2RAC2-1|A0A5G2QM40_PIG Computationally mapped isoform of Homeobox protein cut-like OS=Sus scrofa OX=9823 GN=CUX1 PE=1 SV=1 CANONICAL=A0A5G2QM40-1" }, "locus": { "chromosome": "3", "start_pos": 9669163, "end_pos": 9317328, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069721.1", "url": "https://www.ensembl.org/id/ENSSSCT00000069721.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073269.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073269.1" } ] } }, { "isoform_ac": "F1RKF7-1", "url": "https://www.uniprot.org/uniprotkb/F1RKF7/entry", "sequence": { "sequence": "MERAAGPLRNAYSDPARESKAPGAPGAPLDCGVRGCGPSAEPRAPRGAHAGAPHPAPEPLRCPGGAFLPAIPHPEERRALGVRPGPASSALAAPGQPRDSARWMLCVVEAELKRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDLRKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLHDIETENQKLRETLDEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKVQTLQTALEKTRTELFDLKTKYDEEITAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQADYEEVKKELNILKSMEFAPSEGAGTQDASRPLEVLLLEKNRSLQSENAALRISNSDLSGRCAELQVHVTEVMATAAEQRELIARLEQDLSTIQSIQRPDAEGAAELGLEKIPEPIKEATALFYGPSAPASGTLPEGQVDSLLSIISSQRERFRARNQELEAENRLAQHTIQALQSELDSLRADNIKLYEKIKFLQSYPGRGGGSDDTELRYSTQYEERLDPFSSFSKRERQRKYLSLSPWDKATLSMGRLVLSNKMARTIGFFYTLFLHCLVFLVLYKLAWSESVERDCATFCAKKFADHLHKFHENDHGAAAGDLWQ", "length": 770, "header": "tr|F1RKF7-1|A0A5G2QM40_PIG Computationally mapped isoform of Homeobox protein cut-like OS=Sus scrofa OX=9823 GN=CUX1 PE=1 SV=3 CANONICAL=A0A5G2QM40-1" }, "locus": { "chromosome": "3", "start_pos": 9669163, "end_pos": 9318642, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008424.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008424.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008205.3", "url": "https://www.ensembl.org/id/ENSSSCP00000008205.3" } ] } }, { "isoform_ac": "F1RKF9-1", "url": "https://www.uniprot.org/uniprotkb/F1RKF9/entry", "sequence": { "sequence": "MAANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDLRKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLHDIETENQKLRETLDEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKVQTLQTALEKTRTELFDLKTKYDEEITAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQADYEEVKKELNILKSMEFAPSEGAGTQDASRPLEVLLLEKNRSLQSENAALRISNSDLSGSARRKGKDQPESRRPGPLPASPPSQLPRNTGEQASNTNGTHQFSPAGLTQDFFSSALASPSLPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFSTGPYSTNSISSQSPLQQSPDVNGMAPSPSQSESAGSVSEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQSLNRLFQEVPKRRNGSEGNITTRIRASETGSDEAIKSILEQAKRELQVQKTAEPAQPSSTASGGNSDDAIRSILQQARREMEAQQAALDPALKQAPLSQADLTILTPKLIAPAPTSSVSSYSPLAISLKKPPSAPEPSAPAPPNALALKKEPQDAPGLDLPGAADSAQGVLRHGKSELGRGGSGGVWKDHWWGAVQPERKSSAPPEDPKAEEAGGGGCGSSGGKEKGGGQARAERGQLQGPSSAEYWKDWPSAESPYSQGSELSLTGASRSETPQNSPLPSSPIVPLSKPTKPSVPPLTPEQYEIYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQGVLPVQGQQQGPVLHSVTSLQDPLQQGCVSSESTPKTSASCSPAPESPMSSSESVKSLTELVQQPCPPIDTSKDGKPPEPSDPPASDSSQPATPLPLSGHSALSIQELVAMSPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEPPSAGIDYSQGASPQPQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGSQGQAGASDSPSARSGRAAPSSEGDSCDGVEAAEGPGPADAEESGGPAAAAKSQGGPAEAAAAPEEREEAPRPAEKAEPPPSGTPGPDATDDEGRPRAPPPPPPPPPPPPPPEGPADGPGPVPNPAAAPAAGEDAATSAAPPGEGPCRARDGADRSSALPSTSAPAAARRASSLQSLFGLPEAAGARDSRDNPLRKKKAANLNSIIHRLEKAASREEPIEWEF", "length": 1550, "header": "tr|F1RKF9-1|A0A5G2QM40_PIG Computationally mapped isoform of Homeobox protein cut-like OS=Sus scrofa OX=9823 GN=CUX1 PE=1 SV=4 CANONICAL=A0A5G2QM40-1" }, "locus": { "chromosome": "3", "start_pos": 9644511, "end_pos": 9317328, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008422.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008422.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008203.4", "url": "https://www.ensembl.org/id/ENSSSCP00000008203.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1503, "start_aa": "Thr", "end_pos": 1503, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1503", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 854, "start_aa": "Thr", "end_pos": 854, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr854", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZM59", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM59" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100521258", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521258", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "P34237-1", "protein_name": "Protein CASP", "gene_name": "COY1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MDTSVYSHALDIWAKADLTNLQRELDADVIEIKDKETLSLNSRKSLATETKKFKKLEPEEKLNNVNKIIKQYQREIDNLTQRSKFSEKVLFDVYEKLSEAPDPQPLLQSSLEKLGKIDDSKELKEKISYLEDKLAKYADYETLKSRLLDLEQSSAKTLAKRLTAKTQEINSTWEEKGRNWKEREADLLKQLTNVQEQNKALEAKISKNIDIEGNGNEDGDQENNQKEVSTRIAEYNLVTQELETTQARIYQLEKRNEELSGALAKATSEAEKETELHAKELKLNQLESENALLSASYEQERKSTSHAINELKEQLNSVVAESESYKSELETVRRKLNNYSDYNKIKEELSALKKIEFGVNEDDSDNDIRSEDKNDNTFESSLLSANKKLQATLAEYRSKSTAQEEERNELKKSVDQLKQQIATLKEANEKLETDLEKVENVSPHFNETASMMSGVTRQMNNRTSHKMSPTSSIIGIPEDGELSGNQSTILPIVTKQRDRFRSRNMDLEKQLRQGNSEKGKLKLEISKLKGDNTKLYERIRYLQSYNNNNAPVNQSTERIDVESQYSRVYDESLHPMANFRQNELNHYKNKKLSALEKLFSSFAKVILQNKMTRMVFLFYCIGLHGLVFMMSMYVINISGYMTPEVGIVQSAKSSSNLNGGLGGAEKVAAGVGSVHGINR", "length": 679 }, "evidence": [ { "id": "A0A5G2QM40", "url": "https://omabrowser.org/oma/group/A0A5G2QM40/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P53564-1", "protein_name": "Homeobox protein cut-like 1", "gene_name": "Cux1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLCVAGAKLKRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDLRKQVAPLLKSFQGEIDALSKRSKEAEAAFLTVYKRLIDVPDPVPALDVGQQLEIKVQRLHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKSQAETIALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKLQTLQTALEKTRTELFDLKTKYDEETTAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLNAKNSTLKQLEEKLKGQADYEEVKKELNTLKSMEFAPSEGAGTQDSTKPLEVLLLEKNRSLQSENATLRISNSDLSGSARRKGRDQPESRRPGPLPASPPPQLPRNTGEQVSNTNGTHHFSPAGLSQDFFSSNLASPSLPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSTIFSTGPYSTNSISSPSPLQQSPDVNGMAPSPSQSESAGSISEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQSLNRLFQEVPKRRNRSEGNITTRIRASETGSDEAIKSILEQAKRELQVQKTAEPVQTSSTSSSGNSDDAIRSILQQARREMEAQQAALDPALKPAPLSQPDLTILTPKHLSASPMSTVSTYPPLAISLKKTPAAPETSTAALPSAPALKKEAQDVPTLDPPGSADAAQGVLRPMKSELVRGSTWKDPWWSPIQPERRNLTSSEETKADETTASGKERAGSSQPRAERSQLQGPSASAEYWKEWPSAESPYSQSSELSLTGASRSETPQNSPLPSSPIVPMAKPAKPSVPPLTPEQYEVYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQGVLPVQGQQQGPVLHSVASLQDPLQQGCVSSESTPKTSASCSPAPESPMSSSESVKSLTELVQQPCPAIETSKEGKPPEPSDPPASDSQPTTPLPLSGHSALSIQELVAMSPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEPPSVGIDYSQGASPQPQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGSQGQAGASDSPSARSSRAAPSSEGDSCDGVEATDAEEPGGNIVATKSQGGLAEVAAAPADREEATQPAEKAKAQPLCSGTPGQDDGEDASRPRPLPEGLADAPAPVPSLAAPAAGEDAATSATAPATATEAPGAARAGPAERSSALPSTSAPANAPARRPSSLQSLFGLPEAAGARDNPVRKKKAANLNSIIHRLEKAASREEPIEWEF", "length": 1515 }, "evidence": [ { "id": "A0A5G2QM40", "url": "https://omabrowser.org/oma/group/A0A5G2QM40/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q54R70-1", "protein_name": "Protein CASP", "gene_name": "scdA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTDNKQSSIPSSPPIVVPTTTTDINSFTSSPTSTQGSMTPNPNVIIPTQPPTQPITQSNSTSTPSSSSSSSNKTFESILESWKLFNIDKKKNEFGDNVTQIGALKEDCLKSRKVLAKQTQDFKKFTDDEKIKQFGSLLKLYQDEVDKLTKRSKFTETVFLGMYKDLNEISDPVPALSAALEECSKVDQTTKLEIENRKLQMQLTDFKKEFQEIQNQEVTIRRLEDKIKEMNSERSEFISMDKLNLKEQELKQEFQQQLQASKQREQQLQKQNDQLQDELTKISITNNQIQNQLLDIKTKYEDELQSKHSEIEMLTVEFDRVQSKLTTLQRENLSIREESMVEKNSLTPMVKRVADLELEMLQKETETSKLVDQIQELKTHISTQQDEKSNLSRLYEIEKEKVEKLDKYIQNNPSPSEVELIKKELLTLKAIVDQDEINKAIIDQEKDNNQNNTTNNTGGGSDKLLKDKNRQLENECTRLRLLTNTQESELIEKNLAIDELQKVKDEQLLLIQRLEEDLSNGGVINGLNSNGNAGSLVYQQQQQQQQHHHHLNHHHHHNSLSSSQLQSSNKDIMDISDLLPTNTTNNTTINTSLSSSSSSNNNSPLNIGTNNNNNSVNTLIRSSNESFSNSPQQVGAGNIVQSKDDKMLDIVISQRDRFKTKIVELESDKSKLEKQLDSCRQELSSLKTDNIKLYEKIRFLQSYDKNKSGGGGINNANKEIHSKRNNSGFEKSYDVERGLDIPSSSSSSSSQGGPETEEKYGKLYEESINPFLSFNKKEKYRRYREMNTAERVILNGSRFFLSNKYSRLFLFIYSVLLHLMVFLTLYRLATITTEQHEMGFGNIHQTPPLPQKDIVDSIIEQ", "length": 861 }, "evidence": [ { "id": "A0A5G2QM40", "url": "https://omabrowser.org/oma/group/A0A5G2QM40/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9LS42-1", "protein_name": "Protein CASP", "gene_name": "CASP", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEVSQDGSERDKTPPPSSSSSSSSPIPVVTNFWKEFDLEKEKSLLDEQGLRIAENQENSQKNRRKLAESTRDFKKASPENKLSMFNSLLKGYQEEVDNITKRAKFGENAFLNIYQKLYEAPDPFPALASIAEQDRKLSEVESENRKMKVELEEFRTEATHLKNQQATIRRLEERNRQLEQQMEEKIKEVVEIKQRNLAEENQKTMELLKDREQALQDQLRQAKDSVSTMQKLHELAQNQLFELRAQSDEETAGKQSEVSLLMDEVERAQTRLLTLEREKGHLRSQLQTANEDTDNKKSDNIDSNSMLENSLTAKEKIISELNMEIHNVETALANERESHVAEIKKLNSLLNKKDTIIEEMKKELQERPSAKLVDDLRKKVKILQAVGYNSIEAEDWDAATTGEEMSKMESLLLDKNRKMEHEVTQLKVQLSEKASLLEKAEAKGEELTAKVNEQQRLIQKLEDDILKGYGSKERKGALFDEWEFSEAGVAEQSEPMDQKHVPSEQDQSSMLKVICSQRDRFRARLRETEEEIRRLKEKIGFLTDELEKTKADNVKLYGKIRYVQDYNHDKVVSRGSKKYVEDLESGFSSDVESKYKKIYEDDINPFAAFSKKEREQRIKDLGIRDRITLSSGRFLLGNKYARTFAFFYTIGLHVLVFTCLYRMSAYSYLSHGAEETLMTEATTNLPHGL", "length": 689 }, "evidence": [ { "id": "A0A5G2QM40", "url": "https://omabrowser.org/oma/group/A0A5G2QM40/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM40", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM40" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM40", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM40" } ], "pmid": "" }, { "name": "RNA polymerase II transcription regulatory region sequence-specific DNA binding", "id": "GO:0000977", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000977", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM40", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM40" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM40", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM40" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM40", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM40" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM40", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM40" } ], "pmid": "" }, { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM40", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM40" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM40", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM40" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM40", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM40" } ], "pmid": "" }, { "name": "intra-Golgi vesicle-mediated transport", "id": "GO:0006891", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006891", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM40", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM40" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 364, "end_pos": 366, "annotation": "n_glycosylation_sequon" }, { "start_pos": 438, "end_pos": 440, "annotation": "n_glycosylation_sequon" }, { "start_pos": 492, "end_pos": 494, "annotation": "n_glycosylation_sequon" }, { "start_pos": 549, "end_pos": 551, "annotation": "n_glycosylation_sequon" }, { "start_pos": 753, "end_pos": 755, "annotation": "n_glycosylation_sequon" }, { "start_pos": 758, "end_pos": 760, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QM40", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM40" }, { "id": "PS51042", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51042" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CUT", "eco_id": "ECO_0000259", "start_pos": 645, "end_pos": 732, "start_aa": "Ala", "end_aa": "Arg", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A5G2QM40", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM40" }, { "id": "PS50071", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50071" }, { "id": "PRU00108", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00108" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Homeobox", "eco_id": "ECO_0000259", "start_pos": 1350, "end_pos": 1410, "start_aa": "His", "end_aa": "Glu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 854, 1503 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 364, "end_pos": 366 }, { "start_pos": 438, "end_pos": 440 }, { "start_pos": 492, "end_pos": 494 }, { "start_pos": 549, "end_pos": 551 }, { "start_pos": 753, "end_pos": 755 }, { "start_pos": 758, "end_pos": 760 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QLF4-1", "uniprot_ac": "A0A5G2QLF4", "uniprot_id": "A0A5G2QLF4_PIG", "mass": { "chemical_mass": 43276.0, "monoisotopic_mass": 43276.0 }, "refseq": { "ac": "XP_020931922", "name": "3-hydroxyisobutyryl-CoA hydrolase, mitochondrial isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931922" }, "gene_names": [ { "name": "HIBCH", "type": "recommended", "evidence": [ { "id": "A0A5G2QLF4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLF4" } ] }, { "name": "HIBCH", "type": "synonym", "evidence": [ { "id": "XP_020931922", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931922" } ] } ], "protein_names": [ { "name": "3-hydroxyisobutyryl-CoA hydrolase", "type": "recommended", "evidence": [ { "id": "A0A5G2QLF4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLF4/entry#names_and_taxonomy" } ] }, { "name": "3-hydroxyisobutyryl-CoA hydrolase, mitochondrial isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020931922", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931922" } ] }, { "name": "3-hydroxyisobutyryl-coenzyme A hydrolase", "type": "synonym", "evidence": [ { "id": "A0A5G2QLF4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLF4/entry#names_and_taxonomy" } ] }, { "name": "3.1.2.4", "type": "synonym", "evidence": [ { "id": "A0A5G2QLF4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLF4/entry#names_and_taxonomy" } ] }, { "name": "HIB-CoA hydrolase", "type": "synonym", "evidence": [ { "id": "A0A5G2QLF4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLF4/entry#names_and_taxonomy" } ] }, { "name": "HIBYL-CoA-H", "type": "synonym", "evidence": [ { "id": "A0A5G2QLF4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLF4/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism. Also hydrolyzes 3-hydroxypropanoyl-CoA.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP38", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP38#function" }, { "database": "UniProtKB", "id": "ARBA00024871", "url": "https://www.uniprot.org/uniprotkb/ARBA00024871#function" }, { "database": "UniProtKB", "id": "A0A286ZQD0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQD0#function" }, { "database": "UniProtKB", "id": "A0A287BBF3", "url": "https://www.uniprot.org/uniprotkb/A0A287BBF3#function" }, { "database": "UniProtKB", "id": "A0A5G2QTV8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QTV8#function" }, { "database": "UniProtKB", "id": "A0A5G2QUD2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUD2#function" }, { "database": "UniProtKB", "id": "A0A5G2QLF4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLF4#function" }, { "database": "UniProtKB", "id": "A0A5G2REV7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2REV7#function" }, { "database": "UniProtKB", "id": "F1SN52", "url": "https://www.uniprot.org/uniprotkb/F1SN52#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLF4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLF4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "HIBCH", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLF4", "locus": { "chromosome": "15", "start_pos": 94792985, "end_pos": 94941266, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016049", "url": "https://www.ensembl.org/id/ENSSSCG00000016049" } ] } } ], "crossref": [ { "id": "A0A5G2QLF4", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QLF4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000016049", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016049", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd06558", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06558", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100514687", "url": "https://www.ncbi.nlm.nih.gov/gene/100514687", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR029045", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029045", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032259", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032259", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045004", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045004", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100514687", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514687", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "EVFTMEY", "url": "https://omabrowser.org/oma/group/EVFTMEY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QLF4", "url": "https://www.orthodb.org/?gene=A0A5G2QLF4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR43176", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43176", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR43176:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43176:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF16113", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16113", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-70895", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-70895", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020931922", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931922", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "20888", "url": "https://www.rhea-db.org/rhea/20888", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZP38", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP38", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZP38-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP38-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZQD0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQD0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZQD0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQD0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BBF3", "url": "https://www.uniprot.org/uniprotkb/A0A287BBF3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BBF3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBF3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QLF4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLF4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QLF4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLF4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QTV8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QTV8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QTV8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QTV8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QUD2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUD2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QUD2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUD2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2REV7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2REV7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2REV7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2REV7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SN52", "url": "https://www.uniprot.org/uniprotkb/F1SN52", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SN52-1", "url": "https://www.uniprot.org/uniprotkb/F1SN52-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGLWKVWSFTSRFNSSKRTNTILQHLTMSKHTDAAAEVLLERKGCAGVITLNRPKFLNALNLSMIQQIYPQLKKWEQDPETFLIIMKGAGEKAFCAGGDIRVISENTKTNPKMVQDFFREEYMLNNAIDSCLKPYIALIHGITMGGGVGLSVHGQFRVATEKSLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYTAGIATHFVDSEKLGMLEDDLLALNSPSKENIADVLETYHTKSKIDQDKSFILEEHMDKINSWFSANTVEEIIENLQQDGSSFALEQLKVINKMSPTSLKITLRQLMEGSSKTLPEVLTMEYRLSQACIGGHDFHEGVRAVLIDKDQNPKWKPANLKEVTDEDLNNHFNSLGSNDLKF", "length": 386, "header": "tr|A0A5G2QLF4-1|A0A5G2QLF4_PIG Isoform 1 of 3-hydroxyisobutyryl-CoA hydrolase OS=Sus scrofa OX=9823 GN=HIBCH PE=1 SV=1 CANONICAL=A0A5G2QLF4-1" }, "isoforms": [ { "isoform_ac": "A0A286ZP38-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP38/entry", "sequence": { "sequence": "MVQDFFREEYMLNNAIDSCLKPYIALIHGITMGGGVGLSVHGQFRVATEKSLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYTAGIATHFVDSEKLGMLEDDLLALNSPSKENIADVLETYHTKSKIDQDKSFILEEHMDKINSWFSANTVEEIIENLQQDGSSFALEQLKVINKMSPTSLKITLRQLMEGSSKTLPEVLTMEYRLSQACIGGHDFHEGVRAVLIDKDQNPKWKPANLKEVTDEDLNNHFNSLGSNDLKF", "length": 274, "header": "tr|A0A286ZP38-1|A0A5G2QLF4_PIG Computationally mapped isoform of 3-hydroxyisobutyryl-CoA hydrolase OS=Sus scrofa OX=9823 GN=HIBCH PE=1 SV=3 CANONICAL=A0A5G2QLF4-1" }, "locus": { "chromosome": "15", "start_pos": 94907132, "end_pos": 94795985, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046609.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046609.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033354.3", "url": "https://www.ensembl.org/id/ENSSSCP00000033354.3" } ] } }, { "isoform_ac": "A0A286ZQD0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQD0/entry", "sequence": { "sequence": "MGLWKVWSFTSRFNSSKRTNTILQHLTMSKHTDAAAEVLLERKGCAGVITLNRPKFLNALNLSMIQQIYPQLKKWEQDPETFLIIMKGAGEKAFCAGGDIRDSCLKPYIALIHGITMGGGVGLSVHGQFRVATEKSLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYTAGIATHFVDSEKLGMLEDDLLALNSPSKENIADVLETYHTKSKIDQDKSFILEEHMDKINSWFSANTVEEIIENLQQDGSSFALEQLKVINKMSPTSLKITLRQLMEGSSKTLPEVLTMEYRLSQACIGGHDFHEGVRAVLIDKDQNPKWKPANLKEVTDEDLNNHFNSLGSNDLKF", "length": 359, "header": "tr|A0A286ZQD0-1|A0A5G2QLF4_PIG Computationally mapped isoform of 3-hydroxyisobutyryl-CoA hydrolase OS=Sus scrofa OX=9823 GN=HIBCH PE=1 SV=1 CANONICAL=A0A5G2QLF4-1" }, "locus": { "chromosome": "15", "start_pos": 94941189, "end_pos": 94795985, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052861.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052861.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033663.2", "url": "https://www.ensembl.org/id/ENSSSCP00000033663.2" } ] } }, { "isoform_ac": "A0A287BBF3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBF3/entry", "sequence": { "sequence": "MGLWKVWSFTSRFNSSKRTNTILQHLTMSKHTDAAAEVLLERKGCAGVITLNRPKFLNALNLSMIQQIYPQLKKWEQDPETFLIIMKGAGEKAFCAGGDIRVISENTKTNPKMVQDFFREEYMLNNAIDSCLKPYIALIHGITMGGGVGLSVHGQFRVATEKSLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYTAGIATHFVDSEKLGMLEDDLLALNSPSKENIADVLETYHTKSKIDQDKSFILEEHMDKINSWFSANTVEEIIENLQQDGSSFALEQLKVINKMSPTSLKITLRQLMEGSSKTLPEVLTMEYRLSQACIAWSLILGKNCPDVLSFKWIRSSRSKMRESRYEPRRSNILREAMTFMKALGQF", "length": 389, "header": "tr|A0A287BBF3-1|A0A5G2QLF4_PIG Computationally mapped isoform of 3-hydroxyisobutyryl-CoA hydrolase OS=Sus scrofa OX=9823 GN=HIBCH PE=1 SV=3 CANONICAL=A0A5G2QLF4-1" }, "locus": { "chromosome": "15", "start_pos": 94941189, "end_pos": 94796095, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049732.3", "url": "https://www.ensembl.org/id/ENSSSCT00000049732.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053440.3", "url": "https://www.ensembl.org/id/ENSSSCP00000053440.3" } ] } }, { "isoform_ac": "A0A5G2QLF4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLF4/entry", "sequence": { "sequence": "MGLWKVWSFTSRFNSSKRTNTILQHLTMSKHTDAAAEVLLERKGCAGVITLNRPKFLNALNLSMIQQIYPQLKKWEQDPETFLIIMKGAGEKAFCAGGDIRVISENTKTNPKMVQDFFREEYMLNNAIDSCLKPYIALIHGITMGGGVGLSVHGQFRVATEKSLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYTAGIATHFVDSEKLGMLEDDLLALNSPSKENIADVLETYHTKSKIDQDKSFILEEHMDKINSWFSANTVEEIIENLQQDGSSFALEQLKVINKMSPTSLKITLRQLMEGSSKTLPEVLTMEYRLSQACIGGHDFHEGVRAVLIDKDQNPKWKPANLKEVTDEDLNNHFNSLGSNDLKF", "length": 386, "header": "tr|A0A5G2QLF4-1|A0A5G2QLF4_PIG Isoform 1 of 3-hydroxyisobutyryl-CoA hydrolase OS=Sus scrofa OX=9823 GN=HIBCH PE=1 SV=1 CANONICAL=A0A5G2QLF4-1" }, "locus": { "chromosome": "15", "start_pos": 94941189, "end_pos": 94795985, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089886.2", "url": "https://www.ensembl.org/id/ENSSSCT00000089886.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062904.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062904.1" } ] } }, { "isoform_ac": "A0A5G2QTV8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QTV8/entry", "sequence": { "sequence": "MGLWKVWSFTSRFNSSKRTNTILQHLTMSKHTDAAAEVLLERKGCAGVITLNRPKFLNALNLSMIQQIYPQLKKWEQDPETFLIIMKGAGEKAFCAGGDIRVISENTKTNPKMVQDFFREEYMLNNAIDSCLKPYIALIHGITMGGGVGLSVHGQFRVATEKSLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYTAGIATHFVDSEKLGMLEDDLLALNSPSKENIADVLETYHTKSKIDQDKSFILEEHMDKINSWFSANTVEEIIENLQQDGSSFALEQLKVPPVRDNAAVNNFVCVF", "length": 314, "header": "tr|A0A5G2QTV8-1|A0A5G2QLF4_PIG Computationally mapped isoform of 3-hydroxyisobutyryl-CoA hydrolase OS=Sus scrofa OX=9823 GN=HIBCH PE=1 SV=1 CANONICAL=A0A5G2QLF4-1" }, "locus": { "chromosome": "15", "start_pos": 94941189, "end_pos": 94813988, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090406.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090406.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068283.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068283.1" } ] } }, { "isoform_ac": "A0A5G2QUD2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUD2/entry", "sequence": { "sequence": "TCWCYSSFTQTMSKHTDAAAEVLLERKGCAGVITLNRPKFLNALNLSMIQQIYPQLKKWEQDPETFLIIMKGAGEKAFCAGGDIRVISENTKTNPKMVQDFFREEYMLNNAIDSCLKPYIALIHGITMGGGVGLSVHGQFRVATEKSLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYTAGIATHFVDSEKLGMLEDDLLALNSPSKENIADVLETYHTKSKIDQDKSFILEEHMDKINSWFSANTVEEIIENLQQDGSSFALEQLKVINKMSPTSLKITLRQLMEGSSKTLPEVLTMEYRLSQACIGGHDFHEGVRAVLIDKDQNPKWKPANLKEVTDEDLNNHFNSLGSNDLKF", "length": 370, "header": "tr|A0A5G2QUD2-1|A0A5G2QLF4_PIG Computationally mapped isoform of 3-hydroxyisobutyryl-CoA hydrolase OS=Sus scrofa OX=9823 GN=HIBCH PE=1 SV=1 CANONICAL=A0A5G2QLF4-1" }, "locus": { "chromosome": "15", "start_pos": 94923467, "end_pos": 94795985, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067405.2", "url": "https://www.ensembl.org/id/ENSSSCT00000067405.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067764.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067764.1" } ] } }, { "isoform_ac": "A0A5G2REV7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2REV7/entry", "sequence": { "sequence": "MGLWKVWSFTSRFNSSKRTNTILQHLTMSKHTDAAAEVLLERKGCAGVITLNRPKFLNALNLSMIQQIYPQLKKWEQDPETFLIIMKGAGEKAFCAGGDIRVISENTKTNPKMVQDFFREEYMLNNAIDSCLKPYIALIHGITMGGGVGLSVHGQFRVATEKSLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYTAGIATHFVDSEKLGMLEDDLLALNSPSKENIADVLETYHTKVINKMSPTSLKITLRQLMEGSSKTLPEVLTMEYRLSQACIGGHDFHEGVRAVLIDKDQNPKWKPANLKEVTDEDLNNHFNSLGSNDLKF", "length": 339, "header": "tr|A0A5G2REV7-1|A0A5G2QLF4_PIG Computationally mapped isoform of 3-hydroxyisobutyryl-CoA hydrolase OS=Sus scrofa OX=9823 GN=HIBCH PE=1 SV=1 CANONICAL=A0A5G2QLF4-1" }, "locus": { "chromosome": "15", "start_pos": 94941189, "end_pos": 94795985, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072189.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072189.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069457.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069457.1" } ] } }, { "isoform_ac": "F1SN52-1", "url": "https://www.uniprot.org/uniprotkb/F1SN52/entry", "sequence": { "sequence": "MGLWKVWSFTSRFNSSKRTNTILQHLTMSKHTDAAAEVLLERKGCAGVITLNRPKFLNALNLSMIQQIYPQLKKWEQDPETFLIIMKGAGEKAFCAGGDIRVISENTKTNPKMVQDFFREEYMLNNAIDSCLKPYIALIHGITMGGGVGLSVHGQFRVATEKSLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYTAGIATHFVDSEKLGMLEDDLLALNSPSKENIADVLETYHTKSKIDQDKSFILEEHMDKINSWFSANTVEEIIENLQQDGSSFALEQLKVINKMSPTSLKITLRQLMEGSSKTLPEVLTMEYRLSQACIF", "length": 338, "header": "tr|F1SN52-1|F1SN52_PIG Computationally mapped isoform of 3-hydroxyisobutyryl-CoA hydrolase OS=Sus scrofa OX=9823 GN=HIBCH PE=1 SV=4 CANONICAL=A0A5G2QLF4-1" }, "locus": { "chromosome": "15", "start_pos": 94941189, "end_pos": 94796095, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061788.2", "url": "https://www.ensembl.org/id/ENSSSCT00000061788.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000039257.1", "url": "https://www.ensembl.org/id/ENSSSCP00000039257.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP38", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP38" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100514687", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514687", "resource": "KEGG Pathway" }, { "id": "R-SSC-70895", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-70895", "resource": "Reactome", "description": "Branched-chain amino acid catabolism" } ], "orthologs": [ { "uniprot_canonical_ac": "F1MPK4-1", "protein_name": "3-hydroxyisobutyryl-CoA hydrolase", "gene_name": "HIBCH", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGLQRLCRLMSRFNSYKRTNIILQHLKMSNHTDAAAEVLLERKGCAGVITLNRPRFLNTLTLGMIRQIYAQLKKWEQDPKTFLIIIKGAGEKAFCAGGDIRALSEARNTNQKMLQDLFREEYILNNAIDSCQKPYIALIHGITMGGGVGVSVHGQFRVATEKSVFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYTAGIATHFVDFEKLGMLEEDLLALKSPSKENIADVLETYHAKSKTDQDKPFILEEHMDKINSWFSTNTVEQIVDNLQQDGSSFALEQLKVIKKMSPTSLKITLRQLMEGSSKTLPEVLIMEYRLSQACMKGHDFHEGVRAVLIDKDQSPKWKPADLKEVTDEDLNDYFKSLGSNDLKF", "length": 386 }, "evidence": [ { "id": "A0A5G2QLF4", "url": "https://omabrowser.org/oma/group/A0A5G2QLF4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q55GS6-1", "protein_name": "3-hydroxyisobutyryl-CoA hydrolase, mitochondrial", "gene_name": "hibch", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDRLLTISNHIGKNIRQFSTSTEEVLFEKKGKCLKVLLNRPKALNALNPNMVKILTPKYLEMKTKKDGEGVIVMKGAGEKAFCAGGDIRAIYDYKQLNEEQKSKTNDIGDLFFREEYILNNLIGTNPIAQVSIYNGFAMGGGIGLSVHGKFRVATENTVFAMPETGIGFFCDVGGSYFLPRLPNNYGMYLALTGSKLKGNNVYLAGVATHFVSNEHIQALEKEIEECENPTSQTINSILTKYHDKSKSTSNEYNDNLGDIERIFGKNSVKEIFEQLELLENSEWAKQTLKTLKSVSPSSLMVVFEQMKQGAKLPSLAKCLEMEFRISQHFLEKPDFFEGVRALLVDKDKNPKWLPPSIDQIDQTLVNSYFKPLSNNKELKF", "length": 381 }, "evidence": [ { "id": "A0A5G2QLF4", "url": "https://omabrowser.org/oma/group/A0A5G2QLF4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q5XIE6-1", "protein_name": "3-hydroxyisobutyryl-CoA hydrolase, mitochondrial", "gene_name": "Hibch", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQQFVWRLQSRFSSIRRASVILQHLRMSKHTETAEVLLERRGCAGVITLNRPKLLNALSLNMIRQIYPQLKKWERDPDTFLIIIKGAGGKAFCAGGDIKALSEAKKAGQTLSQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVHRAGIATHFVDSEKLHVLEEELLALKSPSAEDVAGVLESYHAKSKMGQDKSIIFEEHMDKINSCFSANTVEQILENLRQDGSPFAMEQIKVINKMSPTSLKITLRQLMEGSTKTLQEVLTMEYRLTQACMEGHDFHEGVRAVLIDKDQTPKWKPADLKDVTDEDLNSYFKSLGSRDLKF", "length": 385 }, "evidence": [ { "id": "A0A5G2QLF4", "url": "https://omabrowser.org/oma/group/A0A5G2QLF4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5ZJ60-1", "protein_name": "3-hydroxyisobutyryl-CoA hydrolase, mitochondrial", "gene_name": "HIBCH", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAARVLMAPRRLKPFNRLQVILQHLKTCKHTDSAADVLLQKQGGAGIITLNRPKVLNALSFKMIQQIYPQIKAWEQDPETFLIIIKGTGEKAFCAGGDVRAIADAGKAGDTMTRDYFREEYRLDNAIGTCKKPYVALIDGITMGGGVGLSVHGHFRVATEKTVFAMPETAIGLFPDVGGGYFLPRLSGKIGHLLALTGFRLKGRDVLKAGIATHFVESGKLPELEKDLIALKSPSKENIADLLNSYHMQTKIDQEKEFVLDEHMERINSIFSANSMEEIVQKLKQDGSPFATKQLEAINKMSPTSLKLTLRQLREGATMSLQDVFTMEYRLSQACMRGHDFYEGVRAVLIDKDQSPRWKPAALEEVSDEFVDNCFKPLGNNDLKL", "length": 385 }, "evidence": [ { "id": "A0A5G2QLF4", "url": "https://omabrowser.org/oma/group/A0A5G2QLF4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q6NVY1-1", "protein_name": "3-hydroxyisobutyryl-CoA hydrolase, mitochondrial", "gene_name": "HIBCH", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQREMWRLMSRFNAFKRTNTILHHLRMSKHTDAAEEVLLEKKGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLALKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSCFSANTVEEIIENLQQDGSSFALEQLKVINKMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLSQACMRGHDFHEGVRAVLIDKDQSPKWKPADLKEVTEEDLNNHFKSLGSSDLKF", "length": 386 }, "evidence": [ { "id": "A0A5G2QLF4", "url": "https://omabrowser.org/oma/group/A0A5G2QLF4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q86BP1-1", "protein_name": "3-hydroxyisobutyryl-CoA hydrolase, mitochondrial", "gene_name": "Hibch", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MQGPIQRLVYTFGHRTCSQLPMIGGATISQTKPTTMALSVRQSSSSVLATESSNKGMIILNRPKALNAINLEMVRKIYKHLKKCEKSKSLVIIKGTGDKAFCAGGDVRALVEAGPTDESKSFFREEYSTNALIGNYKIPYIAIIDGITMGGGVGLSVHGKYRVASDRTLFAMPETAIGLFPDVGGSYFLPRLQGKLGLYLGLTGYRLRGADVYYSGIATHYCESSKIPDLETALLNCPDADDVPELLQKYHSPPEKPFSLQPVLEQINKNFSADSVEGILENLQNDGSEWAKKTLETLSKMSPTSMKVTFRQLELGSQLSLAQCLIMEYRLAVRHLERSDFKEGVRALLIDKDQKPQWQPTKLADVTEEHVQWFFRKLPDTEELKL", "length": 386 }, "evidence": [ { "id": "A0A5G2QLF4", "url": "https://omabrowser.org/oma/group/A0A5G2QLF4/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q8QZS1-1", "protein_name": "3-hydroxyisobutyryl-CoA hydrolase, mitochondrial", "gene_name": "Hibch", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQPYAWRLLSRVSSFRRASVILQHLRMSMHTEAAEVLLERRGCGGVITLNRPKFLNALSLNMIRQIYPQLKTWEQDPDTFLIIIKGAGGKAFCAGGDIKALSEAKKARQNLTQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQGKLGYFLALTGYRLKGRDVHRAGIATHFVDSEKLRVLEEELLALKSPSAEDVAGVLESYHAKSKMDQDKSIIFEEHMDKINSCFSANTVEQIIENLRQDGSPFAIEQMKVINKMSPTSLKITLRQLMEGSSKTLQEVLIMEYRITQACMEGHDFHEGVRAVLIDKDQTPKWKPANLKDVTDEDLNSYFKSLGSSDLKF", "length": 385 }, "evidence": [ { "id": "A0A5G2QLF4", "url": "https://omabrowser.org/oma/group/A0A5G2QLF4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9LKJ1-1", "protein_name": "3-hydroxyisobutyryl-CoA hydrolase 1", "gene_name": "CHY1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAVEMASQSQVLVEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCAGGDVAAVVRDINQGNWRLGANYFSSEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSTRLTALEADLCRINSNDPTFASTILDAYTQHPRLKQQSAYRRLDVIDRCFSRRTVEEIISALEREATQEADGWISATIQALKKGSPASLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGEISKDFVEGCRAILVDKDKNPKWEPRRLEDMKDSMVEQYFERVEREDDLKLPPRNNLPALGIAKL", "length": 378 }, "evidence": [ { "id": "A0A5G2QLF4", "url": "https://omabrowser.org/oma/group/A0A5G2QLF4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "3-hydroxyisobutyryl-CoA hydrolase activity", "id": "GO:0003860", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003860", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLF4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLF4" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLF4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLF4" } ], "pmid": "" }, { "name": "mitochondrial matrix", "id": "GO:0005759", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005759", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLF4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLF4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "L-valine catabolic process", "id": "GO:0006574", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006574", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLF4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLF4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 14, "end_pos": 16, "annotation": "n_glycosylation_sequon" }, { "start_pos": 61, "end_pos": 63, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "20888", "name": "", "equation": "3-hydroxy-2-methylpropanoyl-CoA + H2O = 3-hydroxy-2-methylpropanoate + CoA + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "20888", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/20888" } ] }, { "id": "R-SSC-70881", "name": "beta-hydroxyisobutyryl-CoA + H2O => beta-hydroxyisobutyrate + CoA", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [ "R-ALL-71847" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-70881", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-70881" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-71847", "participant_name": "bHIB-CoA [mitochondrial matrix]", "crossref": [ { "id": "62611", "database": "ChEBI", "url": "" }, { "id": "ZINC000008219004", "database": "ZINC", "url": "" }, { "id": "C06000", "database": "COMPOUND", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QLF4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 386, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QLF4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QLF4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QLF4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLF4" }, { "id": "PF16113", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16113" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Enoyl-CoA hydratase/isomerase", "eco_id": "ECO_0000259", "start_pos": 47, "end_pos": 376, "start_aa": "Gly", "end_aa": "Phe", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 14, "end_pos": 16 }, { "start_pos": 61, "end_pos": 63 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B444-1", "uniprot_ac": "A0A287B444", "uniprot_id": "A0A287B444_PIG", "mass": { "chemical_mass": 73550.0, "monoisotopic_mass": 73550.0 }, "refseq": {}, "gene_names": [ { "name": "TMPO", "type": "recommended", "evidence": [ { "id": "A0A287B444", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B444" } ] } ], "protein_names": [ { "name": "Thymopoietin", "type": "synonym", "evidence": [ { "id": "A0A287B444", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B444/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B444", "url": "https://www.uniprot.org/uniprotkb/A0A287B444" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TMPO", "url": "https://www.uniprot.org/uniprotkb/A0A287B444", "locus": { "chromosome": "5", "start_pos": 85315290, "end_pos": 85346538, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000038487", "url": "https://www.ensembl.org/id/ENSSSCG00000038487" } ] } } ], "crossref": [ { "id": "A0A287B444", "url": "https://alphafold.ebi.ac.uk/entry/A0A287B444", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000038487", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000038487", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd12940", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd12940", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR003887", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003887", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011015", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011015", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013146", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013146", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR021623", "url": "https://www.ebi.ac.uk/interpro/entry/IPR021623", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051656", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051656", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR12019", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12019", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12019:SF23", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12019:SF23", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12019:SF24", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12019:SF24", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03020", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03020", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08198", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08198", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF11560", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF11560", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZPG2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPG2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZPG2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPG2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B444", "url": "https://www.uniprot.org/uniprotkb/A0A287B444", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B444-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B444-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BPY7", "url": "https://www.uniprot.org/uniprotkb/A0A287BPY7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BPY7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BPY7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FA72", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FA72", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FA72-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FA72-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "KSELVANNVTLPAGEQRKDVYVQLYLQHLTARNRPTLARVPTARGPPDFSSDEEREPTPVLGSGAAAAGRSRAAVGRKATKKTDKPRLEDKDDLDVTELTNEELLDQLVKYGVNPGPIVGTTRKLYEKKLLKLREQGTESRSSTPLPTISSSVENTRQNGSNDSDRYSDNEEGKKKEHKKVKSTRDCVPFSELPTTPSGGFFQGISFPETSTRPPLGRTERQAAKKVHTSKGDPPREPLIAATLPGREQLQKLASGESLLISSKSSHGRCLEKSSSTSSQHELAALLVSAAASPSLIKETTNTCYKDIVENIYCGEKSGIQPLCTKRSHDSDQSTLSSERKALEESERSQVISPPLAQAIRDYVNSLLVQGGIGSLPGTSNSTPPLDVENTWKRIDQSNSQETESLSPPRKLPRLSGKSAEGKDSGSSVAFQNIPESELMSSSAKTVVSHSLTTLGIDMSKQSQRDKIDAPELSFPFHESILKVIEEEWQQIDRQLPSLACKYPVSSGEAVRILSVPKVDDEILGFISEATPPANIQAASTESCEKQLDLALCRTYEAAASALQIATHTAFVVQAMQADISKAAQILSTDPSRMHQALGTLSKTYDAASFLCEAAFDGVKMAAHTMGSSTLGRRYLWLRDCKINPASKNKLVVTPFKGGTLFGREALKVIKKRGNKH", "length": 677, "header": "tr|A0A287B444-1|A0A287B444_PIG Isoform 1 of Thymopoietin OS=Sus scrofa OX=9823 GN=TMPO PE=3 SV=2 CANONICAL=A0A287B444-1" }, "isoforms": [ { "isoform_ac": "A0A286ZPG2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPG2/entry", "sequence": { "sequence": 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"ENSSSCT00000040958.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040958.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051251.2", "url": "https://www.ensembl.org/id/ENSSSCP00000051251.2" } ] } }, { "isoform_ac": "A0A287BPY7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BPY7/entry", "sequence": { "sequence": "KSELVANNVTLPAGEQRKDVYVQLYLQHLTARNRPTLARVPTARGPPDFSSDEEREPTPVLGSGAAAAGRSRAAVGRKATKKTDKPRLEDKDDLDVTELTNEELLDQLVKYGVNPGPIVGTTRKLYEKKLLKLREQGTESRSSTPLPTISSSVENTRQNGSNDSDRYSDNEEDSKIELKLEKREPLKGRAKTPVTLKQRRVEHNQSYSQAGITETEWTSGSSKGGPLQALTRESTRGSRRTPRKRVETSEHFRIDGAVISESTPIAETIMASSNETLVVNRVTGNFKHAAPILPITEFSDIPRRTPKKPLTRAEVGEKTEERRVERDILKEMFPFEASTPTGISASCRRPIKGAAGRPLELSDFRMEESFSSKYIPKYVPLADVKSEKTKKGRSIPMWIKILLFVVVAIFLFLVYQAMETNQGNPFYQFISNNSKNAN", "length": 438, "header": "tr|A0A287BPY7-1|A0A287B444_PIG Computationally mapped isoform of Thymopoietin OS=Sus scrofa OX=9823 GN=TMPO PE=3 SV=3 CANONICAL=A0A287B444-1" }, "locus": { "chromosome": "5", "start_pos": 85346242, "end_pos": 85319650, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065023.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065023.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058688.3", "url": "https://www.ensembl.org/id/ENSSSCP00000058688.3" } ] } }, { "isoform_ac": "A0A8W4FA72-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FA72/entry", "sequence": { "sequence": "IELVANNVTLPAGEQRKDVYVQLYLQHLTARNRPTLARVPTARGPPDFSSDEEREPTPVLGSGAAAAGRSRAAKATKKTDKPRLEDKDDLDVTELTNEELLDQLVKYGVNPGPIVGTTRKLYEKKLLKLREQGTESRSSTPLPTISSSVENTRQNGSNDSDRYSDNEEGKKKEHKKVKSTRDCVPFSELPTTPSGGFFQGISFPETSTRPPLGRTERQAAKKVHTSKGDPPREPLIAATLPGREQLQKLASGESLLISSKSSHGRCLEKSSSTSSQHELAALLVSAAASPSLIKETTNTCYKDIVENIYCGEKSGIQPLCTKRSHDSDQSTLSSERKALEESERSQVISPPLAQAIRDYVNSLLVQGGIGSLPGTSNSTPPLDVENTWKRIDQSNSQETESLSPPRKLPRLSGKSAEGKDSGSSVAFQNIPESELMSSSAKTVVSHSLTTLGIDMSKQSQRDKIDAPELSFPFHESILKVIEEEWQQIDRQLPSLACKYPVSSGEAVRILSVPKVDDEILGFISEATPPANIQAASTESCEKQLDLALCRTYEAAASALQIATHTAFVVQAMQADISKAAQILSTDPSRMHQALGTLSKTYDAASFLCEAAFDGVKMAAHTMGSSTLGRRYLWLRDCKINPASKNKLVVTPFKGGTLFGREALKVIKKRGNKH", "length": 673, "header": "tr|A0A8W4FA72-1|A0A287B444_PIG Computationally mapped isoform of Thymopoietin OS=Sus scrofa OX=9823 GN=TMPO PE=3 SV=1 CANONICAL=A0A287B444-1" }, "locus": { "chromosome": "5", "start_pos": 85346290, "end_pos": 85334804, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105516.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105516.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076224.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076224.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZPG2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPG2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A287B444", "url": "https://www.uniprot.org/uniprotkb/A0A287B444" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nuclear envelope", "id": "GO:0005635", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005635", "evidence": [ { "database": "UniProtKB", "id": "A0A287B444", "url": "https://www.uniprot.org/uniprotkb/A0A287B444" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 159, "end_pos": 161, "annotation": "n_glycosylation_sequon" }, { "start_pos": 162, "end_pos": 164, "annotation": "n_glycosylation_sequon" }, { "start_pos": 381, "end_pos": 383, "annotation": "n_glycosylation_sequon" }, { "start_pos": 8, "end_pos": 10, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287B444-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 677, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287B444-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287B444" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287B444", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B444" }, { "id": "PS50954", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50954" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "LEM", "eco_id": "ECO_0000259", "start_pos": 93, "end_pos": 137, "start_aa": "Asp", "end_aa": "Gly", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A287B444", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B444" }, { "id": "PS50955", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50955" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "LEM-like", "eco_id": "ECO_0000259", "start_pos": 1, "end_pos": 32, "start_aa": "Lys", "end_aa": "Arg", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 159, "end_pos": 161 }, { "start_pos": 162, "end_pos": 164 }, { "start_pos": 381, "end_pos": 383 }, { "start_pos": 8, "end_pos": 10 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QKU4-1", "uniprot_ac": "A0A5G2QKU4", "uniprot_id": "A0A5G2QKU4_PIG", "mass": { "chemical_mass": 32852.0, "monoisotopic_mass": 32852.0 }, "refseq": {}, "gene_names": [ { "name": "COPS7A", "type": "recommended", "evidence": [ { "id": "A0A5G2QKU4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKU4" } ] } ], "protein_names": [ { "name": "COP9 signalosome subunit 7A", "type": "synonym", "evidence": [ { "id": "A0A5G2QKU4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKU4/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF-type complexes such as SCF, CSA or DDB2. The complex is also involved in phosphorylation of p53/TP53, JUN, I-kappa-B-alpha/NFKBIA, ITPK1 and IRF8/ICSBP, possibly via its association with CK2 and PKD kinases. 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"expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKU4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKU4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "COPS7A", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKU4", "locus": { "chromosome": "5", "start_pos": 63957064, "end_pos": 63977424, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000691", "url": "https://www.ensembl.org/id/ENSSSCG00000000691" } ] } } ], "crossref": [ { "id": "A0A5G2QKU4", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QKU4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000000691", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000691", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100157341", "url": "https://www.ncbi.nlm.nih.gov/gene/100157341", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000717", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000717", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041481", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041481", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045237", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045237", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100157341", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157341", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SACEYRH", "url": "https://omabrowser.org/oma/group/SACEYRH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A8W4FDR1", "url": "https://www.orthodb.org/?gene=A0A8W4FDR1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15350", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15350", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15350:SF7", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15350:SF7", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01399", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01399", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18392", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18392", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22061", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22061", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZQZ3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQZ3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZQZ3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQZ3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJQ6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJQ6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJQ6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJQ6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QKU4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKU4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QKU4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKU4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5K1UFV9", "url": "https://www.uniprot.org/uniprotkb/A0A5K1UFV9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5K1UFV9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5K1UFV9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDR1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDR1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDR1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDR1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F2Z5Q3", "url": "https://www.uniprot.org/uniprotkb/F2Z5Q3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F2Z5Q3-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5Q3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTIKVTTAAAAAATSQDPEQHLTELREPAPGTNQERQDLVQVELKGLSVLPRMWVLAACLPLRSPQRAFLCPWPADNLGS", "length": 297, "header": "tr|A0A5G2QKU4-1|A0A5G2QKU4_PIG Isoform 1 of COP9 signalosome subunit 7A OS=Sus scrofa OX=9823 GN=COPS7A PE=1 SV=2 CANONICAL=A0A5G2QKU4-1" }, "isoforms": [ { "isoform_ac": "A0A286ZQZ3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQZ3/entry", "sequence": { "sequence": "MSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQLAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTIKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKGHCVDPFSHCVDPLTLALHLQQPVKQA", "length": 268, "header": "tr|A0A286ZQZ3-1|A0A5G2QKU4_PIG Computationally mapped isoform of COP9 signalosome subunit 7A OS=Sus scrofa OX=9823 GN=COPS7A PE=1 SV=1 CANONICAL=A0A5G2QKU4-1" }, "locus": { "chromosome": "5", "start_pos": 63976788, "end_pos": 63958032, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049774.3", "url": "https://www.ensembl.org/id/ENSSSCT00000049774.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033891.1", "url": "https://www.ensembl.org/id/ENSSSCP00000033891.1" } ] } }, { "isoform_ac": "A0A5G2QJQ6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJQ6/entry", "sequence": { "sequence": "MSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTIKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKG", "length": 263, "header": "tr|A0A5G2QJQ6-1|A0A5G2QJQ6_PIG Computationally mapped isoform of COP9 signalosome subunit 7A OS=Sus scrofa OX=9823 GN=COPS7A PE=1 SV=2 CANONICAL=A0A5G2QKU4-1" }, "locus": { "chromosome": "5", "start_pos": 63976788, "end_pos": 63971564, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076460.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076460.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062287.2", "url": "https://www.ensembl.org/id/ENSSSCP00000062287.2" } ] } }, { "isoform_ac": "A0A5G2QKU4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKU4/entry", "sequence": { "sequence": "MSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTIKVTTAAAAAATSQDPEQHLTELREPAPGTNQERQDLVQVELKGLSVLPRMWVLAACLPLRSPQRAFLCPWPADNLGS", "length": 297, "header": "tr|A0A5G2QKU4-1|A0A5G2QKU4_PIG Isoform 1 of COP9 signalosome subunit 7A OS=Sus scrofa OX=9823 GN=COPS7A PE=1 SV=2 CANONICAL=A0A5G2QKU4-1" }, "locus": { "chromosome": "5", "start_pos": 63976788, "end_pos": 63971264, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000085435.2", "url": "https://www.ensembl.org/id/ENSSSCT00000085435.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065158.2", "url": "https://www.ensembl.org/id/ENSSSCP00000065158.2" } ] } }, { "isoform_ac": "A0A5K1UFV9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5K1UFV9/entry", "sequence": { "sequence": "RWKKKLPGSGPRSLTQSTTRQSAGAHGPWAASLREGAEPRGRIARLAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTIKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKSN", "length": 266, "header": "tr|A0A5K1UFV9-1|A0A5G2QKU4_PIG Computationally mapped isoform of COP9 signalosome subunit 7A OS=Sus scrofa OX=9823 GN=COPS7A PE=1 SV=1 CANONICAL=A0A5G2QKU4-1" }, "locus": { "chromosome": "5", "start_pos": 63977346, "end_pos": 63971374, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027368.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027368.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000025961.3", "url": "https://www.ensembl.org/id/ENSSSCP00000025961.3" } ] } }, { "isoform_ac": "A0A8W4FDR1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDR1/entry", "sequence": { "sequence": "MSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTIKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKSN", "length": 275, "header": "tr|A0A8W4FDR1-1|A0A5G2QKU4_PIG Computationally mapped isoform of COP9 signalosome subunit 7A OS=Sus scrofa OX=9823 GN=COPS7A PE=1 SV=1 CANONICAL=A0A5G2QKU4-1" }, "locus": { "chromosome": "5", "start_pos": 63976788, "end_pos": 63971374, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000100369.1", "url": "https://www.ensembl.org/id/ENSSSCT00000100369.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077448.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077448.1" } ] } }, { "isoform_ac": "F2Z5Q3-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5Q3/entry", "sequence": { "sequence": "MSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTIKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQDLVQVELKGLSVLPRMWVLAACLPLRSPQRAFLCPWPADNLGS", "length": 296, "header": "tr|F2Z5Q3-1|F2Z5Q3_PIG Computationally mapped isoform of COP9 signalosome subunit 7A OS=Sus scrofa OX=9823 GN=COPS7A PE=1 SV=2 CANONICAL=A0A5G2QKU4-1" }, "locus": { "chromosome": "5", "start_pos": 63976788, "end_pos": 63971264, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000753.5", "url": "https://www.ensembl.org/id/ENSSSCT00000000753.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000737.3", "url": "https://www.ensembl.org/id/ENSSSCP00000000737.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQZ3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQZ3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100157341", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157341", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "F6PBL6-1", "protein_name": "COP9 signalosome complex subunit 7a", "gene_name": "cops7a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEVDQLLSLSGSALAQAISSILETPGLYVFSDILELPNVRELETGPHAPVYQLLNLFAYGTYCDYKERTASLPELTPAQRNKLRHLSIISLASNLKCLPYSLLLQQLELKNVRELEDLLIEAIYSDIIHGKLDQRNQQVEVDCSIGRDLGPNELPNIANTLQEWCAGCEAVLCGIEEQVSRANQYRESQLKVKVQVETEVSNLQKTLKASSASPSSGPAPAGAASNQDADQPAEPRDPASSQEPRQPGKKSSKVKGLRGSGKIWSKSN", "length": 268 }, "evidence": [ { "id": "A0A5G2QKU4", "url": "https://omabrowser.org/oma/group/A0A5G2QKU4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "G3GUN6-1", "protein_name": "COP9 signalosome complex subunit 7a isoform X1", "gene_name": "Cops7a", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADILRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTIKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKSN", "length": 275 }, "evidence": [ { "id": "A0A5G2QKU4", "url": "https://omabrowser.org/oma/group/A0A5G2QKU4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3V8Z9-1", "protein_name": "COP9 signalosome subunit 7A", "gene_name": "Cops7a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGCTCSRKLEARAPHQGAAMSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELADSDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIAQTLQEWCVGCEVVLSGIEEQVSRANLHKEQQLGLKQQIESEVANLKKTIKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKSN", "length": 294 }, "evidence": [ { "id": "A0A5G2QKU4", "url": "https://omabrowser.org/oma/group/A0A5G2QKU4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9CZ04-1", "protein_name": "COP9 signalosome complex subunit 7a", "gene_name": "Cops7a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTDAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIAQTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTIKVTTAAAAAATSQDPEQHLTELREPASGTNQRQPSKKASKGKGLRGSAKIWSKSN", "length": 275 }, "evidence": [ { "id": "A0A5G2QKU4", "url": "https://omabrowser.org/oma/group/A0A5G2QKU4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKU4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKU4" } ], "pmid": "" }, { "name": "COP9 signalosome", "id": "GO:0008180", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008180", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKU4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKU4" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKU4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKU4" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKU4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKU4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "COP9 signalosome assembly", "id": "GO:0010387", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010387", 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[ { "pdb_id": "AF-A0A5G2QGK1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 449, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QGK1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QGK1" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QGK1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGK1" }, { "id": "SM00865", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00865" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Tubulin/FtsZ 2-layer sandwich", "eco_id": "ECO_0000259", "start_pos": 246, "end_pos": 383, "start_aa": "Leu", "end_aa": "Glu", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A5G2QGK1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGK1" }, { "id": "SM00864", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00864" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Tubulin/FtsZ GTPase", "eco_id": "ECO_0000259", "start_pos": 47, "end_pos": 244, "start_aa": "Ile", "end_aa": "Gly", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 184, "end_pos": 186 }, { "start_pos": 337, "end_pos": 339 }, { "start_pos": 370, "end_pos": 372 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QHR1-1", "uniprot_ac": "A0A5G2QHR1", "uniprot_id": "A0A5G2QHR1_PIG", "mass": { "chemical_mass": 91654.0, "monoisotopic_mass": 91654.0 }, "refseq": {}, "gene_names": [ { "name": "LOC100518417", "type": "recommended", "evidence": [ { "id": "A0A5G2QHR1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHR1" } ] } ], "protein_names": [ { "name": "Adhesion G protein-coupled receptor E2", "type": "recommended", "evidence": [ { "id": "A0A5G2QHR1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHR1/entry#names_and_taxonomy" } ] }, { "name": "EGF-like module receptor 2", "type": "synonym", "evidence": [ { "id": "A0A5G2QHR1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHR1/entry#names_and_taxonomy" } ] }, { "name": "EGF-like module-containing mucin-like hormone receptor-like 2", "type": "synonym", "evidence": [ { "id": "A0A5G2QHR1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHR1/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHR1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHR1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LOC100518417", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHR1", "locus": {} } ], "crossref": [ { "id": "A0A5G2QHR1", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QHR1", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000036342", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000036342", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00054", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00054", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000152", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000152", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000203", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000203", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000742", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000742", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000832", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000832", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001740", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001740", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001881", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001881", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003056", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003056", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009030", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009030", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017981", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017981", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017983", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017983", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018097", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018097", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046338", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046338", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049883", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049883", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057244", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057244", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR12011", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12011", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12011:SF472", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12011:SF472", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00002", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00002", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01825", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01825", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07645", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07645", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287A4U1", "url": "https://www.uniprot.org/uniprotkb/A0A287A4U1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A4U1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A4U1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B7B5", "url": "https://www.uniprot.org/uniprotkb/A0A287B7B5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B7B5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7B5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QHR1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHR1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QHR1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHR1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R3C1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3C1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R3C1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3C1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R853", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R853", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R853-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R853-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RFP6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RFP6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RFP6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RFP6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RH81", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RH81", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RH81-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RH81-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRNRYLRLLPGLLVLLLLPWGPAAQSTKACARWCPPNSSCVNSTACRCLPGFSASSGEVFTSPSDSCDDINECAPPTAVSCGKGADCQNTEGSYHCICVPGYELASGAPVFRNENENTCQDVDECQQKLRICKSHSICINTQGSYTCQCLPGFKLNPRDPKLCTDVNECTLGSNPCHNSTYCFNLVGRYECPCRPGWKPIPGSPNGPNNTICEDKDECSSGEHHCHNSTICTNTVGSYVCHCPQGWVPKPGFQNKKNTTICEEVSFPTWMPPPGIKSQRLSRFFHRLQDLRGNFSSASVQSTVQGLIQEVGDLLEGPQDLENLSQSEQQFVATNLLLGLENALGWLGKALPIGAVTFSSSAGTVLSLEVQEQGYENITLIQNQTKMLLTWDTVHESGDSGPTVVGLLSTPGVGRFLAKAPLVLDTVEQAALHETHKGVLQELYHDLLSDVISAFISNKDPQNLRHPVTFIFQHSVIPGPREKVFCVFWEHGQNGSGHWATSGCRIVGTKVSSTICQCTHLSSFAILMALYEVQKDSALTVISYMGLSLSLLCLLLVVLTFLFCKAIHNTSTSLHLQLSICLFLAHLLFLTAIDRIEIKVLCSIIAGALHYLYLASFTWMLLEGLHLFLTARNLMVVNYSSVNKFMKKLMFPVGYGVPAVIVTISAASWPHLYGTPTSCWLNSEKGFKWSFLGPVCSIFLVNLAFFLMTLWILKSKLSSLNSDVSTLQNTRMLTFKATAQLFILGCTWCLGILQVGPAAHVMAYLFTIINSLQGVFIFLVYCLLSQQVWEQYGKWFKGIDITKSKSEKYTLSSKTTSDACKYSAARSHIADTACH", "length": 834, "header": "tr|A0A5G2QHR1-1|A0A5G2QHR1_PIG Isoform 1 of Adhesion G protein-coupled receptor E2 OS=Sus scrofa OX=9823 GN=LOC100518417 PE=3 SV=1 CANONICAL=A0A5G2QHR1-1" }, "isoforms": [ { "isoform_ac": "A0A287A4U1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A4U1/entry", "sequence": { "sequence": "MRNRYLRLLPDINECAPPTAVSCGKGADCQNTEGSYHCICVPGYELASGAPVFRNENENTCQDVDECQQKLRICKSHSICINTQGSYTCQCLPGFKLNPRDPKLCTDVNECTLGSNPCHNSTYCFNLVGRYECPCRPGWKPIPGSPNGPNNTICEDKDECSSGEHHCHNSTICTNTVGSYVCHCPQGWVPKPGFQNKKNTTICEEVSFPTWMPPPGIKSQRLSRFFHRLQDLRGNFSSASVQSTVQGLIQEVGDLLEGPQDLENLSQSEQQFVATNLLLGLENALGWLGKALPIGAVTFSSSAGTVLSLEVQEQGYENITLIQNQTKMLLTWDTVHESGDSGPTVVGLLSTPGVGRFLAKAPLVLDTVEQAALHETHKGVLQELYHDLLSDVISAFISNKDPQNLRHPVTFIFQHSVIPGPREKVFCVFWEHGQNGSGHWATSGCRIVGTKVSSTICQCTHLSSFAILMALYEVQKDSALTVISYMGLSLSLLCLLLVVLTFLFCKAIHNTSTSLHLQLSICLFLAHLLFLTAIDRIEIKVLCSIIAGALHYLYLASFTWMLLEGLHLFLTARNLMVVNYSSVNKFMKKLMFPVGYGVPAVIVTISAASWPHLYGTPTSCWLNSEKGFKWSFLGPVCSIFLVNLAFFLMTLWILKSKLSSLNSDVSTLQNTRMLTFKATAQLFILGCTWCLGILQVGPAAHVMAYLFTIINSLQGVFIFLVYCLLSQQVWEQYGKWFKGIDITKSKSEKYTLSSKTTSDACKYSAARSHIADTACH", "length": 776, "header": "tr|A0A287A4U1-1|A0A5G2QHR1_PIG Computationally mapped isoform of Adhesion G protein-coupled receptor E2 OS=Sus scrofa OX=9823 GN=LOC100518417 PE=3 SV=2 CANONICAL=A0A5G2QHR1-1" }, "locus": { "chromosome": "2", "start_pos": 64353821, "end_pos": 64298781, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039637.3", "url": "https://www.ensembl.org/id/ENSSSCT00000039637.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038884.2", "url": "https://www.ensembl.org/id/ENSSSCP00000038884.2" } ] } }, { "isoform_ac": "A0A287B7B5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7B5/entry", "sequence": { "sequence": "MRNRYLRLLPGLLVLLLLPWGPAAQSTKDINECAPPTAVSCGKGADCQNTEGSYHCICVPGYELASGAPVFRNENENTCQDVDECQQKLRICKSHSICINTQGSYTCQCLPGFKLNPRDPKLCTDVNECTLGSNPCHNSTYCFNLVGRYECPCRPGWKPIPGSPNGPNNTICEDKDECSSGEHHCHNSTICTNTVGSYVCHCPQGWVPKPGFQNKKNTTICEEVSFPTWMPPPGIKSQRLSRFFHRLQDLRGNFSSASVQSTVQGLIQEVGDLLEGPQDLENLSQSEQQFVATNLLLGLENALGWLGKALPIGAVTFSSSAGTVLSLEVQEQGYENITLIQNQTKMLLTWDTVHESGDSGPTVVGLLSTPGVGRFLAKAPLVLDTVEQAALHETHKGVLQELYHDLLSDVISAFISNKDPQNLRHPVTFIFQHSVIPGPREKVFCVFWEHGQNGSGHWATSGCRIVGTKVSSTICQCTHLSSFAILMALYEVQKDSALTVISYMGLSLSLLCLLLVVLTFLFCKAIHNTSTSLHLQLSICLFLAHLLFLTAIDRIEIKVLCSIIAGALHYLYLASFTWMLLEGLHLFLTARNLMVVNYSSVNKFMKKLMFPVGYGVPAVIVTISAASWPHLYGTPTSCWLNSEKGFKWSFLGPVCSIFLVNLAFFLMTLWILKSKLSSLNSDVSTLQNTRMLTFKATAQLFILGCTWCLGILQVGPAAHVMAYLFTIINSLQGVFIFLVYCLLSQQVWEQYGKWFKGIDITKSKSEKYTLSSKTTSDACKYSAARSHIADTACH", "length": 794, "header": "tr|A0A287B7B5-1|A0A5G2QHR1_PIG Computationally mapped isoform of Adhesion G protein-coupled receptor E2 OS=Sus scrofa OX=9823 GN=LOC100518417 PE=3 SV=2 CANONICAL=A0A5G2QHR1-1" }, "locus": { "chromosome": "2", "start_pos": 64353821, "end_pos": 64298781, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046608.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046608.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051971.2", "url": "https://www.ensembl.org/id/ENSSSCP00000051971.2" } ] } }, { "isoform_ac": "A0A5G2QHR1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHR1/entry", "sequence": { "sequence": "MRNRYLRLLPGLLVLLLLPWGPAAQSTKACARWCPPNSSCVNSTACRCLPGFSASSGEVFTSPSDSCDDINECAPPTAVSCGKGADCQNTEGSYHCICVPGYELASGAPVFRNENENTCQDVDECQQKLRICKSHSICINTQGSYTCQCLPGFKLNPRDPKLCTDVNECTLGSNPCHNSTYCFNLVGRYECPCRPGWKPIPGSPNGPNNTICEDKDECSSGEHHCHNSTICTNTVGSYVCHCPQGWVPKPGFQNKKNTTICEEVSFPTWMPPPGIKSQRLSRFFHRLQDLRGNFSSASVQSTVQGLIQEVGDLLEGPQDLENLSQSEQQFVATNLLLGLENALGWLGKALPIGAVTFSSSAGTVLSLEVQEQGYENITLIQNQTKMLLTWDTVHESGDSGPTVVGLLSTPGVGRFLAKAPLVLDTVEQAALHETHKGVLQELYHDLLSDVISAFISNKDPQNLRHPVTFIFQHSVIPGPREKVFCVFWEHGQNGSGHWATSGCRIVGTKVSSTICQCTHLSSFAILMALYEVQKDSALTVISYMGLSLSLLCLLLVVLTFLFCKAIHNTSTSLHLQLSICLFLAHLLFLTAIDRIEIKVLCSIIAGALHYLYLASFTWMLLEGLHLFLTARNLMVVNYSSVNKFMKKLMFPVGYGVPAVIVTISAASWPHLYGTPTSCWLNSEKGFKWSFLGPVCSIFLVNLAFFLMTLWILKSKLSSLNSDVSTLQNTRMLTFKATAQLFILGCTWCLGILQVGPAAHVMAYLFTIINSLQGVFIFLVYCLLSQQVWEQYGKWFKGIDITKSKSEKYTLSSKTTSDACKYSAARSHIADTACH", "length": 834, "header": "tr|A0A5G2QHR1-1|A0A5G2QHR1_PIG Isoform 1 of Adhesion G protein-coupled receptor E2 OS=Sus scrofa OX=9823 GN=LOC100518417 PE=3 SV=1 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"CARWCPPNSSCVNSTACRCLPGFSASSGEVFTSPSDSCDDINECAPPTAVSCGKGADCQNTEGSYHCICVPGYELASGAPVFRNENENTCQDVDECQQKLRICKSHSICINTQGSYTCQCLPGFKLNPRDPKLCTDKDECSSGEHHCHNSTICTNTVGSYVCHCPQGWVPKPGFQNKKNTTICEEVSFPTWMPPPGIKSQRLSRFFHRLQDLRGNFSSASVQSTVQGLIQEVGDLLEGPQDLENLSQSEQQFVATNLLLGLENALGWLGKALPIGAVTFSSSAGTVLSLEVQEQGYENITLIQNQTKMLLTWDTVHESGDSGPTVVGLLSTPGVGRFLAKAPLVLDTVEQAALHETHKGVLQELYHDLLSDVISAFISNKDPQNLRHPVTFIFQHKVFCVFWEHGQNGSGHWATSGCRIVGTKVSSTICQCTHLSSFAILMALYEVQEKDSALTVISYMGLSLSLLCLLLVVLTFLFCKAIHNTSTSLHLQLSICLFLAHLLFLTAIDRIEIKVLCSIIAGALHYLYLASFTWMLLEGLHLFLTARNLMVVNYSSVNKFMKKLMFPVGYGVPAVIVTISAASWPHLYGTPTSCWLNSEKGFKWSFLGPVCSIFLVNLAFFLMTLWILKSKLSSLNSDVSTLQNTRMLTFKATAQLFILGCTWCLGILQVGPAAHVMAYLFTIINSLQGVFIFLVYCLLSQQVWEQYGKWFKGIDITKSKSEKYTLSSKTTSDACKYSAVN", "length": 740, "header": "tr|A0A5G2R853-1|A0A5G2QHR1_PIG Computationally mapped isoform of Adhesion G protein-coupled receptor E2 OS=Sus scrofa OX=9823 GN=LOC100518417 PE=3 SV=2 CANONICAL=A0A5G2QHR1-1" }, "locus": { "chromosome": "2", "start_pos": 64365492, "end_pos": 64304057, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068076.2", "url": "https://www.ensembl.org/id/ENSSSCT00000068076.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073265.2", "url": "https://www.ensembl.org/id/ENSSSCP00000073265.2" } ] } }, { "isoform_ac": "A0A5G2RFP6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RFP6/entry", "sequence": { "sequence": "CARWCPPNSSCVNSTACRCLPGFSASSGEVFTSPSDSCDDINECAPPTAVSCGKGADCQNTEGSYHCICVPGYELASGAPVFRNENENTCQEVSFPTWMPPPGIKSQRLSRFFHRLQDLRGNFSSASVQSTVQGLIQEVGDLLEGPQDLENLSQSEQQFVATNLLLGLENALGWLGKALPIGAVTFSSSAGTVLSLEVQEQGYENITLIQNQTKMLLTWDTVHESGDSGPTVVGLLSTPGVGRFLAKAPLVLDTVEQAALHETHKGVLQELYHDLLSDVISAFISNKDPQNLRHPVTFIFQHKVFCVFWEHGQNGSGHWATSGCRIVGTKVSSTICQCTHLSSFAILMALYEVQEKDSALTVISYMGLSLSLLCLLLVVLTFLFCKAIHNTSTSLHLQLSICLFLAHLLFLTAIDRIEIKVLCSIIAGALHYLYLASFTWMLLEGLHLFLTARNLMVVNYSSVNKFMKKLMFPVGYGVPAVIVTISAASWPHLYGTPTSCWLNSEKGFKWSFLGPVCSIFLVNLAFFLMTLWILKSKLSSLNSDVSTLQNTRMLTFKATAQLFILGCTWCLGILQVGPAAHVMAYLFTIINSLQGVFIFLVYCLLSQQVWEQYGKWFKGIDITKSKSEKYTLSSKTTSDACKYSAVN", "length": 647, "header": "tr|A0A5G2RFP6-1|A0A5G2QHR1_PIG Computationally mapped isoform of Adhesion G protein-coupled receptor E2 OS=Sus scrofa OX=9823 GN=LOC100518417 PE=3 SV=2 CANONICAL=A0A5G2QHR1-1" }, "locus": { "chromosome": "2", "start_pos": 64365492, "end_pos": 64304057, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070011.2", "url": "https://www.ensembl.org/id/ENSSSCT00000070011.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073672.2", "url": "https://www.ensembl.org/id/ENSSSCP00000073672.2" } ] } }, { "isoform_ac": "A0A5G2RH81-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RH81/entry", "sequence": { "sequence": "CARWCPPNSSCVNSTACRCLPGFSASSGEVFTSPSDSCDDINECAPPTAVSCGKGADCQNTEGSYHCICVPGYELASGAPVFRNENENTCQDKDECSSGEHHCHNSTICTNTVGSYVCHCPQGWVPKPGFQNKKNTTICEEVSFPTWMPPPGIKSQRLSRFFHRLQDLRGNFSSASVQSTVQGLIQEVGDLLEGPQDLENLSQSEQQFVATNLLLGLENALGWLGKALPIGAVTFSSSAGTVLSLEVQEQGYENITLIQNQTKMLLTWDTVHESGDSGPTVVGLLSTPGVGRFLAKAPLVLDTVEQAALHETHKGVLQELYHDLLSDVISAFISNKDPQNLRHPVTFIFQHKVFCVFWEHGQNGSGHWATSGCRIVGTKVSSTICQCTHLSSFAILMALYEVQEKDSALTVISYMGLSLSLLCLLLVVLTFLFCKAIHNTSTSLHLQLSICLFLAHLLFLTAIDRIEIKVLCSIIAGALHYLYLASFTWMLLEGLHLFLTARNLMVVNYSSVNKFMKKLMFPVGYGVPAVIVTISAASWPHLYGTPTSCWLNSEKGFKWSFLGPVCSIFLVNLAFFLMTLWILKSKLSSLNSDVSTLQNTRMLTFKATAQLFILGCTWCLGILQVGPAAHVMAYLFTIINSLQGVFIFLVYCLLSQQVWEQYGKWFKGIDITKSKSEKYTLSSKTTSDACKYSAVN", "length": 696, "header": "tr|A0A5G2RH81-1|A0A5G2QHR1_PIG Computationally mapped isoform of Adhesion G protein-coupled receptor E2 OS=Sus scrofa OX=9823 GN=LOC100518417 PE=3 SV=2 CANONICAL=A0A5G2QHR1-1" }, "locus": { "chromosome": "2", "start_pos": 64365492, "end_pos": 64304057, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083140.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083140.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074499.2", "url": "https://www.ensembl.org/id/ENSSSCP00000074499.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287A4U1", "url": "https://www.uniprot.org/uniprotkb/A0A287A4U1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "G protein-coupled receptor activity", "id": "GO:0004930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004930", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHR1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHR1" } ], "pmid": "" }, { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHR1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHR1" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": 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"type": "synonym", "evidence": [ { "id": "A0A287B2T6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B2T6/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B2T6", "url": "https://www.uniprot.org/uniprotkb/A0A287B2T6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SLC29A1", "url": "https://www.uniprot.org/uniprotkb/A0A287B2T6", "locus": { "chromosome": "7", "start_pos": 39234685, "end_pos": 39218051, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000001700", "url": "https://www.ensembl.org/id/ENSSSCG00000001700" } ] } } ], "crossref": [ { "id": "A0A287B2T6", "url": "https://alphafold.ebi.ac.uk/entry/A0A287B2T6", "database": "AlphaFoldDB", "categories": [] }, { "id": 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"Protein Classification" ] }, { "id": "PTHR10332:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10332:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01733", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01733", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-83936", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-83936", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9748787", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9748787", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9755088", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9755088", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287AE03", "url": "https://www.uniprot.org/uniprotkb/A0A287AE03", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AE03-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AE03-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B2T6", "url": "https://www.uniprot.org/uniprotkb/A0A287B2T6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B2T6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B2T6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B8K5", "url": "https://www.uniprot.org/uniprotkb/A0A287B8K5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B8K5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B8K5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BCI7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCI7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BCI7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCI7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BCU2", "url": "https://www.uniprot.org/uniprotkb/A0A287BCU2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BCU2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCU2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BKC1", "url": "https://www.uniprot.org/uniprotkb/A0A287BKC1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BKC1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BKC1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RQU4", "url": "https://www.uniprot.org/uniprotkb/F1RQU4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RQU4-1", "url": "https://www.uniprot.org/uniprotkb/F1RQU4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTTSHQPQDRYRAVWLIFFMLGLGTLLPWNFFMTATAYFTNRLDMSHNVSLGPAELSKDVELLATSTAPLAERNYLSAIFNNVMTLCAMLPLLLFTCLNSFLHQRIPQSVRILGSLVAILLVFLITAILVKVSLDPLPFFVITMIKIMLINSFGAILQGSLFGLAGLLPASYTAPIMSGQGLAGFFASVAMICAIASGSELSESAFGYFITACAVIILTIICYLGLPRLEFYRYYQQLKLEGPGEQETKLDLITKGEESKAGQEELRVSASNSQPSNKSHSVRAILRSILVPALSVCFVFTVTIGVFPAVAAEVKSSIADTTSPWNNYFIPVSCFLTFNIFDWLGRSLTAVTMWPGKDSLWLPILVLARLAFVPLLLLCNVQPRHYLPMVFDHDALYIFFMAAFAFSNGYLASLCMCFGPKKVTPAEAETAGAIMAFFLSLGLALGAVFSFLFRAIV", "length": 457, "header": "tr|A0A287B2T6-1|A0A287B2T6_PIG Isoform 1 of Solute carrier family 29 member 1 OS=Sus scrofa OX=9823 GN=SLC29A1 PE=1 SV=1 CANONICAL=A0A287B2T6-1" }, "isoforms": [ { "isoform_ac": "A0A287AE03-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AE03/entry", "sequence": { "sequence": "MQAPEGGSSQPGITENAVTMTTSHQPQDRYRAVWLIFFMLGLGTLLPWNFFMTATAYFTNRLDMSHNVSLGPAELSKDVELLATSTAPLATSTTPSTERNYLSAIFNNVMTLCAMLPLLLFTCLNSFLHQRIPQSVRILGSLVAILLVFLITAILVKVSLDPLPFFVITMIKIMLINSFGAILQGSLFGLAGLLPASYTAPIMSGQGLAGFFASVAMICAIASGSELSESAFGYFITACAVIILTIICYLGLPRLEFYRYYQQLKLEGPGEQETKLDLITKGEESKAGQEELRVSASNSQPSNKSHSVRAILRSILVPALSVCFVFTVTIGVFPAVAAEVKSSIADTTSPWNNYFIPVSCFLTFNIFDWLGRSLTAVTMWPGKDSLWLPILVLARLAFVPLLLLCNVQPRHYLPMVFDHDALYIFFMAAFAFSNGYLASLCMCFGPKKVTPAEAETAGAIMAFFLSLGLALGAVFSFLFRAIV", "length": 483, "header": "tr|A0A287AE03-1|A0A287B2T6_PIG Computationally mapped isoform of Solute carrier family 29 member 1 OS=Sus scrofa OX=9823 GN=SLC29A1 PE=1 SV=1 CANONICAL=A0A287B2T6-1" }, "locus": { "chromosome": "7", "start_pos": 39232519, "end_pos": 39224669, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045651.3", "url": "https://www.ensembl.org/id/ENSSSCT00000045651.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000042041.1", "url": "https://www.ensembl.org/id/ENSSSCP00000042041.1" } ] } }, { "isoform_ac": "A0A287B2T6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B2T6/entry", "sequence": { "sequence": "MTTSHQPQDRYRAVWLIFFMLGLGTLLPWNFFMTATAYFTNRLDMSHNVSLGPAELSKDVELLATSTAPLAERNYLSAIFNNVMTLCAMLPLLLFTCLNSFLHQRIPQSVRILGSLVAILLVFLITAILVKVSLDPLPFFVITMIKIMLINSFGAILQGSLFGLAGLLPASYTAPIMSGQGLAGFFASVAMICAIASGSELSESAFGYFITACAVIILTIICYLGLPRLEFYRYYQQLKLEGPGEQETKLDLITKGEESKAGQEELRVSASNSQPSNKSHSVRAILRSILVPALSVCFVFTVTIGVFPAVAAEVKSSIADTTSPWNNYFIPVSCFLTFNIFDWLGRSLTAVTMWPGKDSLWLPILVLARLAFVPLLLLCNVQPRHYLPMVFDHDALYIFFMAAFAFSNGYLASLCMCFGPKKVTPAEAETAGAIMAFFLSLGLALGAVFSFLFRAIV", "length": 457, "header": "tr|A0A287B2T6-1|A0A287B2T6_PIG Isoform 1 of Solute carrier family 29 member 1 OS=Sus scrofa OX=9823 GN=SLC29A1 PE=1 SV=1 CANONICAL=A0A287B2T6-1" }, "locus": { "chromosome": "7", "start_pos": 39232519, "end_pos": 39225424, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064476.3", "url": "https://www.ensembl.org/id/ENSSSCT00000064476.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050560.2", "url": "https://www.ensembl.org/id/ENSSSCP00000050560.2" } ] } }, { "isoform_ac": "A0A287B8K5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B8K5/entry", "sequence": { "sequence": "MGLLPPTSRPGGVSPETPRAASFILDPHPGGAHGQGLLPEPELGPPPPDRPDPLRPDPAAGESGRPQAPEGGSSQPGITENAVTMTTSHQPQDRYRAVWLIFFMLGLGTLLPWNFFMTATAYFTNRLDMSHNVSLGPAELSKDVELLATSTAPLATSTTPSTERNYLSAIFNNVMTLCAMLPLLLFTCLNSFLHQRIPQSVRILGSLVAILLVFLITAILVKVSLDPLPFFVITMIKIMLINSFGAILQGSLFGLAGLLPASYTAPIMSGQGLAGFFASVAMICAIASGSELSESAFGYFITACAVIILTIICYLGLPRLEFYRYYQQLKLEGPGEQETKLDLITKGEESKAGQEELRVSASNSQPSNKSHSVRAILRSILVPALSVCFVFTVTIGVFPAVAAEVKSSIADTTSPWNNYFIPVSCFLTFNIFDWLGRSLTAVTMWPGKDSLWLPILVLARLAFVPLLLLCNVQPRHYLPMVFDHDALYIFFMAAFAFSNGYLASLCMCFGPKKVTPAEAETAGAIMAFFLSLGLALGAVFSFLFRAIV", "length": 548, "header": "tr|A0A287B8K5-1|A0A287B2T6_PIG Computationally mapped isoform of Solute carrier family 29 member 1 OS=Sus scrofa OX=9823 GN=SLC29A1 PE=1 SV=2 CANONICAL=A0A287B2T6-1" }, "locus": { "chromosome": "7", "start_pos": 39232519, "end_pos": 39223977, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053303.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053303.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052412.2", "url": "https://www.ensembl.org/id/ENSSSCP00000052412.2" } ] } }, { "isoform_ac": "A0A287BCI7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCI7/entry", "sequence": { "sequence": "MVGPTKLVLSGPGENSSLTSQHPACLYRAVWLIFFMLGLGTLLPWNFFMTATAYFTNRLDMSHNVSLGPAELSKDVELLATSTAPLATSTTPSTERNYLSAIFNNVMTLCAMLPLLLFTCLNSFLHQRIPQSVRILGSLVAILLVFLITAILVKVSLDPLPFFVITMIKIMLINSFGAILQGSLFGLAGLLPASYTAPIMSGQGLAGFFASVAMICAIASGSELSESAFGYFITACAVIILTIICYLGLPRLEFYRYYQQLKLEGPGEQETKLDLITKDPSTTCPPPGEESKAGQEELRVSASNSQPSNKSHSVRAILRSILVPALSVCFVFTVTIGVFPAVAAEVKSSIADTTSPWNNYFIPVSCFLTFNIFDWLGRSLTAVTMWPGKDSLWLPILVLARLAFVPLLLLCNVQPRHYLPMVFDHDALYIFFMAAFAFSNGYLASLCMCFGPKKVTPAEAETAGAIMAFFLSLGLALGAVFSFLFRAIV", "length": 489, "header": "tr|A0A287BCI7-1|A0A287B2T6_PIG Computationally mapped isoform of Solute carrier family 29 member 1 OS=Sus scrofa OX=9823 GN=SLC29A1 PE=1 SV=3 CANONICAL=A0A287B2T6-1" }, "locus": { "chromosome": "7", "start_pos": 39232519, "end_pos": 39227100, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058430.3", "url": "https://www.ensembl.org/id/ENSSSCT00000058430.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054235.3", "url": "https://www.ensembl.org/id/ENSSSCP00000054235.3" } ] } }, { "isoform_ac": "A0A287BCU2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCU2/entry", "sequence": { "sequence": "MTTSHQPQDRYRAVWLIFFMLGLGTLLPWNFFMTATAYFTNRLDMSHNVSLGPAELSKDVELLATSTAPLATSTTPSTERNYLSAIFNNVMTLCAMLPLLLFTCLNSFLHQRIPQSVRILGSLVAILLVFLITAILVKVSLDPLPFFVITMIKIMLINSFGAILQGSLFGLAGLLPASYTAPIMSGQGLAGFFASVAMICAIASGSELSESAFGYFITACAVIILTIICYLGLPRLEFYRYYQQLKLEGPGEQETKLDLITKGEESKAGQEELRVSASNSQPSNKSHSVRAILRSILVPALSVCFVFTVTIGVFPAVAAEVKSSIADTTSPWNNYFIPVSCFLTFNIFDWLGRSLTAVTMWPGKDSLWLPILVLARLAFVPLLLLCNVQPRHYLPMVFDHDALYIFFMAAFAFSNGYLASLCMCFGPKKVTPAEAETAGAIMAFFLSLGLALGAVFSFLFRAIV", "length": 464, "header": "tr|A0A287BCU2-1|A0A287BCU2_PIG Computationally mapped isoform of Solute carrier family 29 member 1 OS=Sus scrofa OX=9823 GN=SLC29A1 PE=1 SV=1 CANONICAL=A0A287B2T6-1" }, "locus": { "chromosome": "7", "start_pos": 39232519, "end_pos": 39225424, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052837.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052837.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054351.2", "url": "https://www.ensembl.org/id/ENSSSCP00000054351.2" } ] } }, { "isoform_ac": "A0A287BKC1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BKC1/entry", "sequence": { "sequence": "MTTSHQPQDRYRAVWLIFFMLGLGTLLPWNFFMTATAYFTNRLDMSHNVSLGPAELSKDVELLATSTAPLATSTTPSTERNYLSAIFNNVMTLCAMLPLLLFTCLNSFLHQRIPQSVRILGSLVAILLVFLITAILVKVSLDPLPFFVITMIKIMLINSFGAILQGSLFGLAGLLPASYTAPIMSGQGLAGFFASVAMICAIASGSELSESAFGYFITACAVIILTIICYLGLPRLEFYRYYQQLKLEGPGEQETKLDLITKDNYFIPVSCFLTFNIFDWLGRSLTAVTMWPGKDSLWLPILVLARLAFVPLLLLCNVQPRHYLPMVFDHDALYIFFMAAFAFSNGYLASLCMCFGPKKVTPAEAETAGAIMAFFLSLGLALGAVFSFLFRAIV", "length": 394, "header": "tr|A0A287BKC1-1|A0A287BKC1_PIG Computationally mapped isoform of Solute carrier family 29 member 1 OS=Sus scrofa OX=9823 GN=SLC29A1 PE=1 SV=1 CANONICAL=A0A287B2T6-1" }, "locus": { "chromosome": "7", "start_pos": 39232519, "end_pos": 39225424, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039238.3", "url": "https://www.ensembl.org/id/ENSSSCT00000039238.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056527.1", "url": "https://www.ensembl.org/id/ENSSSCP00000056527.1" } ] } }, { "isoform_ac": "F1RQU4-1", "url": "https://www.uniprot.org/uniprotkb/F1RQU4/entry", "sequence": { "sequence": "RYRAVWLIFFMLGLGTLLPWNFFMTATAYFTNRLDMSHNVSLGPAELSKDVELLATSTAPLATSTTPSTERNYLSAIFNNVMTLCAMLPLLLFTCLNSFLHQRIPQSVRILGSLVAILLVFLITAILVKVSLDPLPFFVITMIKIMLINSFGAILQGSLFGLAGLLPASYTAPIMSGQGLAGFFASVAMICAIASGSELSESAFGYFITACAVIILTIICYLGLPRLEFYRYYQQLKLEGPGEQETKLDLITKGEESKAGQEELRVSASNSQPSNKSHSVRAILRSILVPALSVCFVFTVTIGVFPAVAAEVKSSIADTTSPWNNYFIPVSCFLTFNIFDWLGRSLTAVTMWPGKDSLWLPILVLARLAFVPLLLLCNVQPRHYLPMVFDHDALYIFFMAAFAFSNGYLASLCMCFGPKKVTPAEAETAGAIMAFFLSLGLALGAVFSFLFRAIV", "length": 455, "header": "tr|F1RQU4-1|A0A287B2T6_PIG Computationally mapped isoform of Solute carrier family 29 member 1 OS=Sus scrofa OX=9823 GN=SLC29A1 PE=1 SV=5 CANONICAL=A0A287B2T6-1" }, "locus": { "chromosome": "7", "start_pos": 39232519, "end_pos": 39227687, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000001899.5", "url": "https://www.ensembl.org/id/ENSSSCT00000001899.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000001852.5", "url": "https://www.ensembl.org/id/ENSSSCP00000001852.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B8K5", "url": "https://www.uniprot.org/uniprotkb/A0A287B8K5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:396631", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:396631", "resource": "KEGG Pathway" }, { "id": "R-SSC-83936", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-83936", "resource": "Reactome", "description": "Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane" }, { "id": "R-SSC-9748787", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9748787", "resource": "Reactome", "description": "Azathioprine ADME" }, { "id": "R-SSC-9755088", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9755088", "resource": "Reactome", "description": "Ribavirin ADME" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2MZB0-1", "protein_name": "Equilibrative nucleoside transporter 1 isoform X5", "gene_name": "LOC100754792", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTTSHQPQDRYKAVWLIFFMLGLGTLLPWNFFMTATQYFTNRLDLYQNVSSATDKPSKDTEALPAPTVTLPERSPLSAIFSNVMTLCAMLPLLLFTCLNSFLHQRISQSVRILGSLVAILLVFLITAILVKVEVDALTFFIITMIKIVLINSFGAVLQASLFGLAGVLPANYTAPIMSGQGLAGFFTSVAMICAIASGSKLSESAFGYFITACVFVILAIVCYLALPRLEFYRYYLQLNLEGPSDQETKLDLISKGEEPRGGREESGVPARSSPPSSKNHSIKAILKNISVLALSVCFIFTVTIGLFPAVTTEVESSIAGTSAWKSYYFIPVACFLNFNVFDWLGRSLTAICMWPGKDSLWLPVLVVSRIVFIPLLLLCKVKHRYYLRSIFTHDAWFIIFMAAFAFSNGYLASLCMCFGPKKVKPAEAETAGNIMSFFLCLGLALGAVLSFLLRALG", "length": 457 }, "evidence": [ { "id": "A0A287B2T6", "url": "https://omabrowser.org/oma/group/A0A287B2T6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese 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"MASPRLLALLLLLVGAFNAAAAESIRETEVINPQDLLEGRYFSGDLPDDEDVGGPGQEPDDFEWSGSGDLEGPEDKHMLPEVTHPLVPLDNHIPERTGPGGRVPTEPKELEENEVIPKRMSPFDGDEDVSNKVSMSSTAQGSNIFERTEVLSALIVGGIVGILFAVFLVLLLVYRMKKKDEGSYDLGKKPGSDSGFRVRRELAFYCSCLPVFDSLGLHCPSGKTGLHLAFLKARLELDRFLNFQFRIQPQLGAYTEQCTLSKGLSKLYESCWRYPSPIPISLSLCQQLDSSWEKEPEPSVCTLRGVCQKAPATTHGALWSTWGHSSLFRVTFGNQLFFFFHLERVRRRIEGSS", "length": 353, "header": "tr|A0A5S6HZW1-1|A0A5G2QGF4_PIG Computationally mapped isoform of Syndecan OS=Sus scrofa OX=9823 GN=SDC4 PE=3 SV=1 CANONICAL=A0A5G2QGF4-1" }, "locus": { "chromosome": "17", "start_pos": 47670452, "end_pos": 47649902, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049336.2", "url": "https://www.ensembl.org/id/ENSSSCT00000049336.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000048536.2", "url": "https://www.ensembl.org/id/ENSSSCP00000048536.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5S6HZW1", "url": "https://www.uniprot.org/uniprotkb/A0A5S6HZW1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cell surface", "id": "GO:0009986", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009986", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGF4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGF4" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGF4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGF4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "cell migration", "id": "GO:0016477", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016477", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGF4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGF4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QGF4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 200, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QGF4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QGF4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QGF4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGF4" }, { "id": "SM00294", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00294" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Neurexin/syndecan/glycophorin C", "eco_id": "ECO_0000259", "start_pos": 171, "end_pos": 189, "start_aa": "Val", "end_aa": "Ile", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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"database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287B4L9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4L9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B4L9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B4L9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5K1VJQ6", "url": "https://www.uniprot.org/uniprotkb/A0A5K1VJQ6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5K1VJQ6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5K1VJQ6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FGV2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGV2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FGV2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGV2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTRILTACKVVKTLKTGFGLTNVTVHHQWKISRPGIRLLSVKAQTAHIVLEDGTKMKGYSFGHPSSVAGEVVFNTGLAGYPEALTDPAYKGQILTMANPIVGNGGAPDTTALDELGLSKYMESDGIKVAGLLVLNYSDDYHHWLATKSLGQWLQEEKVPAVYGVDTRMLTKIIRDKGTMLGKIEFEGQSVDFVDPNKQNLIAEVSTKDVKVYGKGNPTKVVAVDCGIKNNVIRLLVKRGAEVHVVPWNHDFTNMEYDGLLIAGGPGNPALAEPLIQNVKKILESDRKEPLFGISTGNLITGLAAGAKAYKMAMANRGQNQPVLNITNRQAFITAQNHGYALDSTLPAGWKPLFVNVNDQTNEGIMHESKPFFGVQFHPEVSPGPLDTEYLFDSFFSLIKKGKGTTITSVLPKPALVASRVEVSKVLILGSGGLSIGQAGEFDYSGSQAVKAMKEENVKTVLMNPNIASVQTNEVGLKQADTVYFLPITPQFVTEVIKAERPDGLILGMGGQTALNCGVELFRRGVLKEYGVKVLGTSVESIMATEDRQLFSDKLNEINEKIAPSFAVESIEDALKAADTIGYPVMIRSAYALGGLGSGICPNKETLLDLSTKAFAMTNQILVERSVTGWKEIEFEVVRDADDNCVTVCSMENVDAMGVHTGDSVVVAPAQTLSNVEFQMLRRTSINVVRHLGIVGECNIQFALHPTSMEYCIIEVNARLSRSSALASKATGYPLAFIAAKIALGIPLPEIKNVVSGKTSACFEPSLDYMVTKIPRWDLDRFHGTSSRIGSSMKSVGEVMAIGRTFEESFQKALRMCHPSIDGFTSRLPMNKEWPSNIDLRRELADPSSTRIYAIAKALEDNMSLDEIMKLTSIDKWFLYKMRDILNMEKTLKGLNSESITEETLKKAKEIGFSDKQISKCLRLTEAQTRELRLKKNIHPWVKQIDTLAAEYPSVTNYLYVTYNGQEHDINFDEHGMMVLGCGPYHIGSSVEFDWCAVSSIRTLRQLGKKTVVVNCNPETVSTDFDECDKLYFEELSLERILDIYHQEACGGCIISVGGQIPNNLAVPLYKNGVKIMGTSPLQIDRAEDRSIFSAVLDELKVAQAPWKAVNTLNEALEFAKSVGYPCLLRPSYVLSGSAMNVVFSEDEMKKFLEEATRVSQEHPVVLTKFIEGAREVEMDAVGKDGRVISHAISEHVEDAGVHSGDATLMLPTQTISQGAIEKVKDATRKIAKAFAISGPFNVQFLVKGNDVLVIECNLRASRSFPFVSKTLGVDFIDVATKVMIGENIDEKPLPTLEHPIIPADYVAIKAPMFSWPRLRDADPILRCEMASTGEVACFGEGIHTAFLKAMLSTGFKIPQKGILIGIQQSFRPRFLGVAELHNEGFKLFATEATSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIALLTNFQVTKLFAEAVKKSRNVDAKSLFHYRQYGAGKAA", "length": 1499, "header": "tr|A0A287B4L9-1|A0A287B4L9_PIG Isoform 1 of Carbamoyl-phosphate synthase [ammonia], mitochondrial OS=Sus scrofa OX=9823 GN=CPS1 PE=1 SV=2 CANONICAL=A0A287B4L9-1" }, "isoforms": [ { "isoform_ac": "A0A287B4L9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B4L9/entry", "sequence": { "sequence": "MTRILTACKVVKTLKTGFGLTNVTVHHQWKISRPGIRLLSVKAQTAHIVLEDGTKMKGYSFGHPSSVAGEVVFNTGLAGYPEALTDPAYKGQILTMANPIVGNGGAPDTTALDELGLSKYMESDGIKVAGLLVLNYSDDYHHWLATKSLGQWLQEEKVPAVYGVDTRMLTKIIRDKGTMLGKIEFEGQSVDFVDPNKQNLIAEVSTKDVKVYGKGNPTKVVAVDCGIKNNVIRLLVKRGAEVHVVPWNHDFTNMEYDGLLIAGGPGNPALAEPLIQNVKKILESDRKEPLFGISTGNLITGLAAGAKAYKMAMANRGQNQPVLNITNRQAFITAQNHGYALDSTLPAGWKPLFVNVNDQTNEGIMHESKPFFGVQFHPEVSPGPLDTEYLFDSFFSLIKKGKGTTITSVLPKPALVASRVEVSKVLILGSGGLSIGQAGEFDYSGSQAVKAMKEENVKTVLMNPNIASVQTNEVGLKQADTVYFLPITPQFVTEVIKAERPDGLILGMGGQTALNCGVELFRRGVLKEYGVKVLGTSVESIMATEDRQLFSDKLNEINEKIAPSFAVESIEDALKAADTIGYPVMIRSAYALGGLGSGICPNKETLLDLSTKAFAMTNQILVERSVTGWKEIEFEVVRDADDNCVTVCSMENVDAMGVHTGDSVVVAPAQTLSNVEFQMLRRTSINVVRHLGIVGECNIQFALHPTSMEYCIIEVNARLSRSSALASKATGYPLAFIAAKIALGIPLPEIKNVVSGKTSACFEPSLDYMVTKIPRWDLDRFHGTSSRIGSSMKSVGEVMAIGRTFEESFQKALRMCHPSIDGFTSRLPMNKEWPSNIDLRRELADPSSTRIYAIAKALEDNMSLDEIMKLTSIDKWFLYKMRDILNMEKTLKGLNSESITEETLKKAKEIGFSDKQISKCLRLTEAQTRELRLKKNIHPWVKQIDTLAAEYPSVTNYLYVTYNGQEHDINFDEHGMMVLGCGPYHIGSSVEFDWCAVSSIRTLRQLGKKTVVVNCNPETVSTDFDECDKLYFEELSLERILDIYHQEACGGCIISVGGQIPNNLAVPLYKNGVKIMGTSPLQIDRAEDRSIFSAVLDELKVAQAPWKAVNTLNEALEFAKSVGYPCLLRPSYVLSGSAMNVVFSEDEMKKFLEEATRVSQEHPVVLTKFIEGAREVEMDAVGKDGRVISHAISEHVEDAGVHSGDATLMLPTQTISQGAIEKVKDATRKIAKAFAISGPFNVQFLVKGNDVLVIECNLRASRSFPFVSKTLGVDFIDVATKVMIGENIDEKPLPTLEHPIIPADYVAIKAPMFSWPRLRDADPILRCEMASTGEVACFGEGIHTAFLKAMLSTGFKIPQKGILIGIQQSFRPRFLGVAELHNEGFKLFATEATSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIALLTNFQVTKLFAEAVKKSRNVDAKSLFHYRQYGAGKAA", "length": 1499, "header": "tr|A0A287B4L9-1|A0A287B4L9_PIG Isoform 1 of Carbamoyl-phosphate synthase [ammonia], mitochondrial OS=Sus scrofa OX=9823 GN=CPS1 PE=1 SV=2 CANONICAL=A0A287B4L9-1" }, "locus": { "chromosome": "15", "start_pos": 113338075, "end_pos": 113221742, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058996.3", "url": "https://www.ensembl.org/id/ENSSSCT00000058996.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051055.3", "url": "https://www.ensembl.org/id/ENSSSCP00000051055.3" } ] } }, { "isoform_ac": "A0A5K1VJQ6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5K1VJQ6/entry", "sequence": { "sequence": "MTRILTACKVVKTLKTGFGLTNVTVHHQWKISRPGIRLLSVKAQTAHIVLEDGTKMKGYSFGHPSSVAGEVVFNTGLAGYPEALTDPAYKGQILTMANPIVGNGGAPDTTALDELGLSKYMESDGIKVAGLLVLNYSDDYHHWLATKSLGQWLQEEKVPAVYGVDTRMLTKIIRDKGTMLGKIEFEGQSVDFVDPNKQNLIAEVSTKDVKVYGKGNPTKVVAVDCGIKNNVIRLLVKRGAEVHVVPWNHDFTNMEYDGLLIAGGPGNPALAEPLIQNVKKILESDRKEPLFGISTGNLITGLAAGAKAYKMAMANRGQNQPVLNITNRQAFITAQNHGYALDSTLPAGWKPLFVNVNDQTNEGIMHESKPFFGVQFHPEVSPGPLDTEYLFDSFFSLIKKGKGTTITSVLPKPALVASRVEVSKVLILGSGGLSIGQAGEFDYSGSQAVKAMKEENVKTVLMNPNIASVQTNEVGLKQADTVYFLPITPQFVTEVIKAERPDGLILGMGGQTALNCGVELFRRGVLKEYGVKVLGTSVESIMATEDRQLFSDKLNEINEKIAPSFAVESIEDALKAADTIGYPVMIRSAYALGGLGSGICPNKETLLDLSTKAFAMTNQILVERSVTGWKEIEFEVVRDADDNCVTVCSMENVDAMGVHTGDSVVVAPAQTLSNVEFQMLRRTSINVVRHLGIVGECNIQFALHPTSMEYCIIEVNARLSRSSALASKATGYPLAFIAAKIALGIPLPEIKNVVSGKTSACFEPSLDYMVTKIPRWDLDRFHGTSSRIGSSMKSVGEVMAIGRTFEESFQKALRMCHPSIDGFTSRLPMNKEWPSNIDLRRELADPSSTRIYAIAKALEDNMSLDEIMKLTSIDKWFLYKMRDILNMEKTLKGLNSESITEETLKKAKEIGFSDKQISKCLRLTEAQTRELRLKKNIHPWVKQIDTLAAEYPSVTNYLYVTYNGQEHDINFDEHGMMVLGCGPYHIGSSVEFDWCAVSSIRTLRQLGKKTVVVNCNPETVSTDFDECDKLYFEELSLERILDIYHQEACGGCIISVGGQIPNNLAVPLYKNGVKIMGTSPLQIDRAEDRSIFSAVLDELKVAQAPWKAVNTLNEALEFAKSVGYPCLLRPSYVLSGSAMNVVFSEDEMKKFLEEATRVSQEHPVVLTKFIEGAREVEMDAVGKDGRVISHAISEHVEDAGVHSGDATLMLPTQTISQGAIEKEETRKRVIECNLRASRSFPFVSKTLGVDFIDVATKVMIGENIDEKPLPTLEHPIIPADYVAIKAPMFSWPRLRDADPILRCEMASTGEVACFGEGIHTAFLKAMLSTGFKIPQKGILIGIQQSFRPRFLGVAEHYTMKASSSLPQKPHQTGSMQTMFLPLQWHGRLKKDRIPASLPSESKNWAEFSEITEWMRINSGNEYDINISPYPVVSLLKVS", "length": 1438, "header": "tr|A0A5K1VJQ6-1|A0A287B4L9_PIG Computationally mapped isoform of Carbamoyl-phosphate synthase [ammonia], mitochondrial OS=Sus scrofa OX=9823 GN=CPS1 PE=1 SV=2 CANONICAL=A0A287B4L9-1" }, "locus": { "chromosome": "15", "start_pos": 113335585, "end_pos": 113221742, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031099.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031099.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024017.4", "url": "https://www.ensembl.org/id/ENSSSCP00000024017.4" } ] } }, { "isoform_ac": "A0A8W4FGV2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGV2/entry", "sequence": { "sequence": "SSQINIFKMTRILTACKVVKTLKTGFGLTNVTVHHQWKISRPGIRLLSVKAQTAHIVLEDGTKMKGYSFGHPSSVAGEVVFNTGLAGYPEALTDPAYKGQILTMANPIVGNGGAPDTTALDELGLSKYMESDGIKVAGLLVLNYSDDYHHWLATKSLGQWLQEEKVPAVYGVDTRMLTKIIRDKGTMLGKIEFEGQSVDFVDPNKQNLIAEVSTKDVKVYGKGNPTKVVAVDCGIKNNVIRLLVKRGAEVHVVPWNHDFTNMEYDGLLIAGGPGNPALAEPLIQNVKKILESDRKEPLFGISTGNLITGLAAGAKAYKMAMANRGQNQPVLNITNRQAFITAQNHGYALDSTLPAGWKPLFVNVNDQTNEGIMHESKPFFGVQFHPEVSPGPLDTEYLFDSFFSLIKKGKGTTITSVLPKPALVASRVEVSKVLILGSGGLSIGQAGEFDYSGSQAVKAMKEENVKTVLMNPNIASVQTNEVGLKQADTVYFLPITPQFVTEVIKAERPDGLILGMGGQTALNCGVELFRRGVLKEYGVKVLGTSVESIMATEDRQLFSDKLNEINEKIAPSFAVESIEDALKAADTIGYPVMIRSAYALGGLGSGICPNKETLLDLSTKAFAMTNQILVERSVTGWKEIEFEVVRDADDNCVTVCSMENVDAMGVHTGDSVVVAPAQTLSNVEFQMLRRTSINVVRHLGIVGECNIQFALHPTSMEYCIIEVNARLSRSSALASKATGYPLAFIAAKIALGIPLPEIKNVVSGKTSACFEPSLDYMVTKIPRWDLDRFHGTSSRIGSSMKSVGEVMAIGRTFEESFQKALRMCHPSIDGFTSRLPMNKEWPSNIDLRRELADPSSTRIYAIAKALEDNMSLDEIMKLTSIDKWFLYKMRDILNMEKTLKGLNSESITEETLKKAKEIGFSDKQISKCLRLTEAQTRELRLKKNIHPWVKQIDTLAAEYPSVTNYLYVTYNGQEHDINFDEHGMMVLGCGPYHIGSSVEFDWCAVSSIRTLRQLGKKTVVVNCNPETVSTDFDECDKLYFEELSLERILDIYHQEACGGCIISVGGQIPNNLAVPLYKNGVKIMGTSPLQIDRAEDRSIFSAVLDELKVAQAPWKAVNTLNEALEFAKSVGYPCLLRPSYVLSGSAMNVVFSEDEMKKFLEEATRVSQEHPVVLTKFIEGAREVEMDAVGKDGRVISHAISEHVEDAGVHSGDATLMLPTQTISQGAIEKVKDATRKIAKAFAISGPFNVQFLVKGNDVLVIECNLRASRSFPFVSKTLGVDFIDVATKVMIGENIDEKPLPTLEHPIIPADYVAIKAPMFSWPRLRDADPILRCEMASTGEVACFGEGIHTAFLKAMLSTGFKIPQKGILIGIQQSFRPRFLGVAELHNEGFKLFATEATSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIALLTNFQVTKLFAEAVKKSRNVDAKSLFHYRQYGAGKAA", "length": 1507, "header": "tr|A0A8W4FGV2-1|A0A287B4L9_PIG Computationally mapped isoform of Carbamoyl-phosphate synthase [ammonia], mitochondrial OS=Sus scrofa OX=9823 GN=CPS1 PE=1 SV=1 CANONICAL=A0A287B4L9-1" }, "locus": { "chromosome": "15", "start_pos": 113338075, "end_pos": 113150157, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000099410.1", "url": "https://www.ensembl.org/id/ENSSSCT00000099410.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077540.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077540.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FGV2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGV2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-70635", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-70635", "resource": "Reactome", "description": "Urea cycle" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "carbamoyl-phosphate synthase (ammonia) activity", "id": "GO:0004087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004087", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4L9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4L9" } ], "pmid": "" }, { "name": "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity", "id": "GO:0004088", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004088", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4L9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4L9" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4L9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4L9" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4L9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4L9" } ], "pmid": "" }, { "name": "modified amino acid binding", "id": "GO:0072341", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072341", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4L9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4L9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 10, "go_terms": [ { "name": "nitric oxide metabolic process", "id": "GO:0046209", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046209", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4L9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4L9" } ], "pmid": "" }, { "name": "carbamoyl phosphate biosynthetic process", "id": "GO:0070409", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070409", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4L9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4L9" } ], "pmid": "" }, { "name": "cellular response to ammonium ion", "id": "GO:0071242", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071242", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4L9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4L9" } ], "pmid": "" }, { "name": "response to lipopolysaccharide", "id": "GO:0032496", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032496", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4L9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4L9" } ], "pmid": "" }, { "name": "vasodilation", "id": "GO:0042311", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042311", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4L9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4L9" } ], "pmid": "" }, { "name": "triglyceride catabolic process", "id": "GO:0019433", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019433", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4L9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4L9" } ], "pmid": "" }, { "name": "urea cycle", "id": "GO:0000050", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000050", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4L9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4L9" } ], "pmid": "" }, { "name": "glutamine metabolic process", "id": "GO:0006541", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006541", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4L9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4L9" } ], "pmid": "" }, { "name": "homocysteine metabolic process", "id": "GO:0050667", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050667", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4L9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4L9" } ], "pmid": "" }, { "name": "'de novo' pyrimidine nucleobase biosynthetic process", "id": "GO:0006207", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006207", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4L9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4L9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4L9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4L9" } ], "pmid": "" }, { "name": "mitochondrial nucleoid", "id": "GO:0042645", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042645", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4L9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4L9" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4L9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4L9" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4L9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4L9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 135, "end_pos": 137, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1440, "end_pos": 1442, "annotation": "n_glycosylation_sequon" }, { "start_pos": 22, "end_pos": 24, "annotation": "n_glycosylation_sequon" }, { "start_pos": 324, "end_pos": 326, "annotation": "n_glycosylation_sequon" }, { "start_pos": 861, "end_pos": 863, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "18029", "name": "", "equation": "hydrogencarbonate + NH4(+) + 2 ATP = carbamoyl phosphate + 2 ADP + phosphate + 2 H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "18029", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/18029" } ] }, { "id": "R-SSC-70555", "name": "2 ATP + NH4+ + HCO3- => 2 ADP + orthophosphate + carbamoyl phosphate [mitochondrial]", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-70555", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-70555" } ] }, { "id": "R-SSC-9955504", "name": "SIRT5 deglutarylates CPS1", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [ "R-SSC-9955510" ], "output_participant_list": [ "R-ALL-9955515", "R-SSC-70544" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9955504", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9955504" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-9955515", "participant_name": "2''-O-glutaryl-ADP-D-ribose(3-) [mitochondrial matrix]", "crossref": [ { "id": "ZINC000263614920", "database": "ZINC", "url": "" }, { "id": "87829", "database": "ChEBI", "url": "" }, { "id": "ZINC000263614919", "database": "ZINC", "url": "" } ] }, { "participant_id": "R-SSC-70544", "participant_name": "CPS1 [mitochondrial matrix]", "crossref": [ { "id": "ENSSSCT00000058996", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCG00000016159", "database": "ENSEMBL", "url": "" }, { "id": "A0A287B4L9", "database": "UniProt", "url": "" 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PE=3 SV=1 CANONICAL=A0A287B398-1" }, "locus": { "chromosome": "7", "start_pos": 52382405, "end_pos": 52328555, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002024.5", "url": "https://www.ensembl.org/id/ENSSSCT00000002024.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000001975.4", "url": "https://www.ensembl.org/id/ENSSSCP00000001975.4" } ] } }, { "isoform_ac": "F1RI92-1", "url": "https://www.uniprot.org/uniprotkb/F1RI92/entry", "sequence": { "sequence": "MASPLEEEAGKIKDCWDNQEAPALSTCSNANIFRRINTILDNSLDFSRVCTTPINRGIHDHLPDFQDSEETVSSRMLFPTSAQDSSRGLPDANDLCLGLQSLSLIGWDRPWSTQDSDSSAQSGTHSVLSMLHNPLGNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRRSRLDTRPILDSRSSSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLSLTGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWPGASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRALLQACSRDSLNPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKFTKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSVEGLRHHSPLMRNQKNRDAS", "length": 561, "header": "tr|F1RI92-1|A0A287B398_PIG Computationally mapped isoform of Cytoplasmic polyadenylation element-binding protein 1 OS=Sus scrofa OX=9823 GN=CPEB1 PE=3 SV=3 CANONICAL=A0A287B398-1" }, "locus": { "chromosome": "7", "start_pos": 52382405, "end_pos": 52304558, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002028.3", "url": "https://www.ensembl.org/id/ENSSSCT00000002028.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000001979.3", "url": "https://www.ensembl.org/id/ENSSSCP00000001979.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 169, "start_aa": "Thr", "end_pos": 169, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr169", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 173, "start_aa": "Thr", "end_pos": 173, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr173", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda 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"database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDAPLEKIADPTLAEMGKNLKEAMKMLEDGQRRSEEENGKKLISGDIPGPLQGSGQDMVSILQLVQNLMHGDEEEEPPSTRVQDIGEQGHIALLGHSLGAYISTLDKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLARICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNTMFGSQHQMDVAFLEKLIKDDIERGRLPLLLVANAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAATKCDSMTLTPGPWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPADKLRALPLWLSLQYLGLDGIVERIKHACQLSQRLQESLKKVDHIKILVEDELSSPVVVFRFFQELPGSDPGPNVVPAPSVAPSAVGRERHSCDALNRWLGEQLKQLVPASGLTVMDLEVEGTCVRFSPLMTAAALGTRAEDMDQLVACIHGKLPLLTCTLQLREEFKQEVAGTAGLLYVDDPNWPGIGVVRYEHANDDKNSLKLDPEGEKIHAGLLKKLNELESDLTFKMGPEYKSMKSCIYIGMASDDVDVSELVETIAATAREIEENSRLLENMTEVVRKGIQEAQVQLQKANEERLLEEGVLRQIPVVGSVLNWFSPVQASQKGRTFNLTAGSLESTEHTYVYKVQGSGVTPPQTPSAARTRQRLPGQKPFKRSLRGSDAVSETSSVSHVDDLEKMEHLSGGQDAPEADSPEQHPGPPAAEAEQPRALQDGAQRPDDGRPQVEDPENLR", "length": 785, "header": "tr|A0A287B2K7-1|A0A287B2K7_PIG Isoform 1 of Pyridoxal-dependent decarboxylase domain-containing protein 1 OS=Sus scrofa OX=9823 GN=PDXDC1 PE=1 SV=1 CANONICAL=A0A287B2K7-1" }, "isoforms": [ { "isoform_ac": "A0A286ZNI2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNI2/entry", "sequence": { "sequence": "PFVLSSCGLLCMCADPTLAEMGKNLKEAMKMLEDGQRRSEEENGKKLISGDIPGPLQGSGQDMVSILQLVQNLMHGDEEEEPPSTRVQDIGEQGHIALLGHSLGAYISTLDKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLARICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNTMFGSQHQMDVAFLEKLIKDDIERGRLPLLLVANAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAATKCDSMTLTPGPWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPADKLRALPLWLSLQYLGLDGIVERIKHACQLSQRLQESLKKVDHIKILVEDELSSPVVVFRFFQELPGSDPGPNVVPAPSVAPSAVGRERHSCDALNRWLGEQLKQLVPASGLTVMDLEVEGTCVRFSPLMTAAALGTRAEDMDQLVACIHGKLPLLTCTLQLREEFKQEVAGTAGLLYVDDPNWPGIGVVRYEHANDDKNSLKLDPEGEKIHAGLLKKLNELESDLTFKMGPEYKSMKSCIYIGMASDDVDVSELVETIAATAREIEENSRLLENMTEVVRKGIQEAQVQLQKANEERLLEEGVLRQIPVVGSVLNWFSPVQASQKGRTFNLTAGSLESTEHTYVYKVQGSGVTPPQTPSAARTRQRLPGQKPFKRSLRGSDAVSETSSVSHVDDLEKMEHLSGGQDAPEADSPEQHPGPPAAEAEQPRALQDGAQRPDDGRPQVEDPENLR", "length": 790, "header": "tr|A0A286ZNI2-1|A0A287B2K7_PIG Computationally mapped isoform of Pyridoxal-dependent decarboxylase domain-containing protein 1 OS=Sus scrofa OX=9823 GN=PDXDC1 PE=1 SV=2 CANONICAL=A0A287B2K7-1" }, "locus": { "chromosome": "3", "start_pos": 7519081, "end_pos": 7480063, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000036712.3", "url": "https://www.ensembl.org/id/ENSSSCT00000036712.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033014.2", "url": "https://www.ensembl.org/id/ENSSSCP00000033014.2" } ] } }, { "isoform_ac": "A0A287AIR3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AIR3/entry", "sequence": { "sequence": "MGELGSLGLEIQIADPTLAEMGKNLKEAMKMLEDGQRRSEEENGKKLISGDIPGPLQGSGQDMVSILQLVQNLMHGDEEEEPPSTRVQDIGEQGHIALLGHSLGAYISTLDKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLARICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNTMFGSQHQMDVAFLEKLIKDDIERGRLPLLLVANAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAATKCDSMTLTPGPWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPADKLRALPLWLSLQYLGLDGIVERIKHACQLSQRLQESLKKVDHIKILVEDELSSPVVVFRFFQELPGSDPGPNVVPAPSVAPSAVGRERHSCDALNRWLGEQLKQLVPASGLTVMDLEVEGTCVRFSPLMTAAALGTRAEDMDQLVACIHGKLPLLTCTLQLREEFKQEVAGTAGLLYVDDPNWPGIGVVRYEHANDDKNSLKLDPEGEKIHAGLLKKLNELESDLTFKMGPEYKSMKSCIYIGMASDDVDVSELVETIAATAREIEENSRLLENMTEVVRKGIQEAQVQLQKANEERLLEEGVLRQIPVVGSVLNWFSPVQASQKGRTFNLTAGSLESTEHTYVYKVQGSGVTPPQTPSAARTRQRLPGQKPFKRSLRGSDAVSETSSVSHVDDLEKMEHLSGGQDAPEADSPEQHPGPPAAEAEQPRALQDGAQRPDDGRPQADQARLLLK", "length": 791, "header": "tr|A0A287AIR3-1|A0A287B2K7_PIG Computationally mapped isoform of Pyridoxal-dependent decarboxylase domain-containing protein 1 OS=Sus scrofa OX=9823 GN=PDXDC1 PE=1 SV=2 CANONICAL=A0A287B2K7-1" }, "locus": { "chromosome": "3", "start_pos": 7520192, "end_pos": 7465026, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063085.2", "url": "https://www.ensembl.org/id/ENSSSCT00000063085.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043784.2", "url": "https://www.ensembl.org/id/ENSSSCP00000043784.2" } ] } }, { "isoform_ac": "A0A287AKV2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AKV2/entry", "sequence": { "sequence": "MDIADPTLAEMGKNLKEAMKMLEDGQRRSEEENGKKLISGDIPGPLQGSGQDMVSILQLVQNLMHGDEEEEPPSTRVQDIGEQGHIALLGHSLGAYISTLDKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLARICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNTMFGSQHQMDVAFLEKLIKDDIERGRLPLLLVANAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAATKCDSMTLTPGPWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPADKLRALPLWLSLQYLGLDGIVERIKHACQLSQRLQESLKKVDHIKILVEDELSSPVVVFRFFQELPGSDPGPNVVPAPSVAPSAVGRERHSCDALNRWLGEQLKQLVPASGLTVMDLEVEGTCVRFSPLMTAAALGTRAEDMDQLVACIHGKLPLLTCTLQLREEFKQEVAGTAGLLYVDDPNWPGIGVVRYEHANDDKNSLKLDPEGEKIHAGLLKKLNELESDLTFKMGPEYKSMKSCIYIGMASDDVDVSELVETIAATAREIEENSRLLENMTEVVRKGIQEAQVQLQKANEERLLEEGVLRQIPVVGSVLNWFSPVQASQKGRTFNLTAGSLESTEHTYVYKVQGSGVTPPQTPSAARTRQRLPGQKPFKRSLRGSDAVSETSSVSHVDDLEKMEHLSGGQDAPEADSPEQHPGPPAAEAEQPRALQDGAQRPDDGRPQVEDPENLR", "length": 780, "header": "tr|A0A287AKV2-1|A0A287B2K7_PIG Computationally mapped isoform of Pyridoxal-dependent decarboxylase domain-containing protein 1 OS=Sus scrofa OX=9823 GN=PDXDC1 PE=1 SV=2 CANONICAL=A0A287B2K7-1" }, "locus": { "chromosome": "3", "start_pos": 7519081, "end_pos": 7480560, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040294.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040294.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000044528.2", "url": "https://www.ensembl.org/id/ENSSSCP00000044528.2" } ] } }, { "isoform_ac": "A0A287ARZ5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ARZ5/entry", "sequence": { "sequence": "MCLPFLLCHPGFKKSGLPALGDSKPPIQVAHSPHSAPEARLPQSRLPSMGLYPGPSPHYRCGVKRPEYCHLNPQGLCIQFLVPSKIADPTLAEMGKNLKEAMKMLEDGQRRSEEENGKKLISGDIPGPLQGSGQDMVSILQLVQNLMHGDEEEEPPSTRVQDIGEQGHIALLGHSLGAYISTLDKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLARICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNTMFGSQHQMDVAFLEKLIKDDIERGRLPLLLVANAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAATKCDSMTLTPGPWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPADKLRALPLWLSLQYLGLDGIVERIKHACQLSQRLQESLKKVDHIKILVEDELSSPVVVFRFFQELPGSDPGPNVVPAPSVAPSAVGRERHSCDALNRWLGEQLKQLVPASGLTVMDLEVEGTCVRFSPLMTAAALGTRAEDMDQLVACIHGKLPLLTCTLQLREEFKQEVAGTAGLLYVDDPNWPGIGVVRYEHANDDKNSLKLDPEGEKIHAGLLKKLNELESDLTFKMGPEYKSMKSCIYIGMASDDVDVSELVETIAATAREIEENSRLLENMTEVVRKGIQEAQVQLQKANEERLLEEGVLRQIPVVGSVLNWFSPVQASQKGRTFNLTAGSLESTEHTYVYKVQGSGVTPPQTPSAARTRQRLPGQKPFKRSLRGSDAVSETSSVSHVDDLEKMEHLSGGQDAPEADSPEQHPGPPAAEAEQPRALQDGAQRPDDGRPQADQARLLLK", "length": 864, "header": "tr|A0A287ARZ5-1|A0A287B2K7_PIG Computationally mapped isoform of Pyridoxal-dependent decarboxylase domain-containing protein 1 OS=Sus scrofa OX=9823 GN=PDXDC1 PE=1 SV=1 CANONICAL=A0A287B2K7-1" }, "locus": { "chromosome": "3", "start_pos": 7520192, "end_pos": 7407930, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061587.3", "url": "https://www.ensembl.org/id/ENSSSCT00000061587.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046730.1", "url": "https://www.ensembl.org/id/ENSSSCP00000046730.1" } ] } }, { "isoform_ac": "A0A287AU47-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AU47/entry", "sequence": { "sequence": "MDAPLEKIADPTLAEMGKNLKEAMKMLEDGQRRSEEENGKKLISGDIPGPLQGSGQDMVSILQLVQNLMHGDEEEEPPSTRVQDIGEQGHIALLGHSLGAYISTLDKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLARICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNTMFGSQHQMDVAFLEKLIKDDIERGRLPLLLVANAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLTLVAGLTSNKPADKLRALPLWLSLQYLGLDGIVERIKHACQLSQRLQESLKKVDHIKILVEDELSSPVVVFRFFQELPGSDPGPNVVPAPSVAPSAVGRERHSCDALNRWLGEQLKQLVPASGLTVMDLEVEGTCVRFSPLMTAAALGTRAEDMDQLVACIHGKLPLLTCTLQLREEFKQEVAGTAGLLYVDDPNWPGIGVVRYEHANDDKNSLKLDPEGEKIHAGLLKKLNELESDLTFKMGPEYKSMKSCIYIGMASDDVDVSELVETIAATAREIEENSRLLENMTEVVRKGIQEAQVQLQKANEERLLEEGVLRQIPVVGSVLNWFSPVQASQKGRTFNLTAGSLESTEHTYVYKVQGSGVTPPQTPSAARTRQRLPGQKPFKRSLRGSDAVSETSSVSHVDDLEKMEHLSGGQDAPEADSPEQHPGPPAAEAEQPRALQDGAQRPDDGRPQVEDPENLR", "length": 751, "header": "tr|A0A287AU47-1|A0A287B2K7_PIG Computationally mapped isoform of Pyridoxal-dependent decarboxylase domain-containing protein 1 OS=Sus scrofa OX=9823 GN=PDXDC1 PE=1 SV=2 CANONICAL=A0A287B2K7-1" }, "locus": { "chromosome": "3", "start_pos": 7519081, "end_pos": 7465461, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000057388.3", "url": "https://www.ensembl.org/id/ENSSSCT00000057388.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047447.2", "url": "https://www.ensembl.org/id/ENSSSCP00000047447.2" } ] } }, { "isoform_ac": "A0A287B2K7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B2K7/entry", "sequence": { "sequence": "MDAPLEKIADPTLAEMGKNLKEAMKMLEDGQRRSEEENGKKLISGDIPGPLQGSGQDMVSILQLVQNLMHGDEEEEPPSTRVQDIGEQGHIALLGHSLGAYISTLDKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLARICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNTMFGSQHQMDVAFLEKLIKDDIERGRLPLLLVANAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAATKCDSMTLTPGPWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPADKLRALPLWLSLQYLGLDGIVERIKHACQLSQRLQESLKKVDHIKILVEDELSSPVVVFRFFQELPGSDPGPNVVPAPSVAPSAVGRERHSCDALNRWLGEQLKQLVPASGLTVMDLEVEGTCVRFSPLMTAAALGTRAEDMDQLVACIHGKLPLLTCTLQLREEFKQEVAGTAGLLYVDDPNWPGIGVVRYEHANDDKNSLKLDPEGEKIHAGLLKKLNELESDLTFKMGPEYKSMKSCIYIGMASDDVDVSELVETIAATAREIEENSRLLENMTEVVRKGIQEAQVQLQKANEERLLEEGVLRQIPVVGSVLNWFSPVQASQKGRTFNLTAGSLESTEHTYVYKVQGSGVTPPQTPSAARTRQRLPGQKPFKRSLRGSDAVSETSSVSHVDDLEKMEHLSGGQDAPEADSPEQHPGPPAAEAEQPRALQDGAQRPDDGRPQVEDPENLR", "length": 785, "header": "tr|A0A287B2K7-1|A0A287B2K7_PIG Isoform 1 of Pyridoxal-dependent decarboxylase domain-containing protein 1 OS=Sus scrofa OX=9823 GN=PDXDC1 PE=1 SV=1 CANONICAL=A0A287B2K7-1" }, "locus": { "chromosome": "3", "start_pos": 7519081, "end_pos": 7465461, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062966.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062966.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050385.1", "url": "https://www.ensembl.org/id/ENSSSCP00000050385.1" } ] } }, { "isoform_ac": "A0A287BCG7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCG7/entry", "sequence": { "sequence": "MDAPLEKIADPTLAEMGKNLKEAMKMLEDGQRRSEEENGKKLISGDIPGPLQGSGQDMVSILQLVQNLMHGDEEEEPPSTRVQDIGEQGHIALLGHSLGAYISTLDKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLARICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNTMFGSQHQMDVAFLEKLIKDDIERGRLPLLLVANAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAATKCDSMTLTPGPWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPADKLRALPLWLSLQYLGLDGIVERIKHACQLSQRLQESLKKVDHIKILVEDELSSPVVVFRFFQELPGSDPGPNVVPAPSVAPSAVGRERHSCDALNRWLGEQLKQLVPASGLTVMDLEVEGTCVRFSPLMTAAALGTRAEDMDQLVACIHGKLPLLTCTLQLREEFKQEVAGTAGLLYVDDPNWPGIGVVRYEHANDDKNSLKLDPEGEKIHAGLLKKLNELESDLTFKMGPEYKSMKSCIYIGMASDDVDVSELVETIAATAREIEENSRLLENMTEVVRKGIQEAQVQLQKANEERLLEEGVLRQIPVVGSVLNWFSPVQASQKGRTFNLTAGSLESTEHTYVYKVQGSGVTPPQTPSAARTRQRLPGQKPFKRSLRGSDAVSETSSVSHVDDLEKMEHLSGGQDAPEADSPEQHPGPPAAEAEQPRALQDGAQRPDDGRPQMIEQGLPCLLVQ", "length": 789, "header": "tr|A0A287BCG7-1|A0A287BCG7_PIG Computationally mapped isoform of Pyridoxal-dependent decarboxylase domain-containing protein 1 OS=Sus scrofa OX=9823 GN=PDXDC1 PE=1 SV=1 CANONICAL=A0A287B2K7-1" }, "locus": { "chromosome": "3", "start_pos": 7520513, "end_pos": 7465461, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060697.3", "url": "https://www.ensembl.org/id/ENSSSCT00000060697.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054215.2", "url": "https://www.ensembl.org/id/ENSSSCP00000054215.2" } ] } }, { "isoform_ac": "A0A5G2R089-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R089/entry", "sequence": { "sequence": "MDAPLEKIADPTLAEMGKNLKEAMKMLEDGQRRSEEENGKKLISGDIPGPLQGSGQDMVSILQLVQNLMHGDEEEEPPSTRVQDIGEQGHIALLGHSLGAYISTLDKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLARICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNTMFGSQHQMDVAFLEKLIKDDIERGRLPLLLVANAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAATKCDSMTLTPGPWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPADKLRALPLWLSLQYLGLDGIVERIKHACQLVEDELSSPVVVFRFFQELPGSDPGPNVVPAPSVAPSAVGRERHSCDALNRWLGEQLKQLVPASGLTVMDLEVEGTCVRFSPLMTAAALGTRAEDMDQLVACIHGKLPLLTCTLQLREEFKQEVAGTAGLLYVDDPNWPGIGVVRYEHANDDKNSLKLDPEGEKIHAGLLKKLNELESDLTFKMGPEYKSMKSCIYIGMASDDVDVSELVETIAATAREIEENSRLLENMTEVVRKGIQEAQVQLQKANEERLLEEGVLRQIPVVGSVLNWFSPVQASQKGRTFNLTAGSLESTEHTYVYKVQGSGVTPPQTPSAARTRQRLPGQKPFKRSLRGSDAVSETSSVSHVDDLEKMEHLSGGQDAPEADSPEQHPGPPAAEAEQPRALQDGAQRPDDGRPQVEDPENLR", "length": 768, "header": "tr|A0A5G2R089-1|A0A287B2K7_PIG Computationally mapped isoform of Pyridoxal-dependent decarboxylase domain-containing protein 1 OS=Sus scrofa OX=9823 GN=PDXDC1 PE=1 SV=1 CANONICAL=A0A287B2K7-1" }, "locus": { "chromosome": "3", "start_pos": 7519081, "end_pos": 7465461, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084257.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084257.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069805.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069805.1" } ] } }, { "isoform_ac": "A0A8W4FN22-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FN22/entry", "sequence": { "sequence": "MCLPFLLCHPGFKKSGLPALGDSKPPIQVAHSPHSAPEARLPQSRLPSMGLYPGPSPHYRCGVKRPEYCHLNPQGLCIQFLVPSKIADPTLAEMGKNLKEAMKMLEDGQRRSEEENGKKLISGDIPGPLQGSGQDMVSILQLVQNLMHGDEEEEPPSTRVQDIGEQGHIALLGHSLGAYISTLDKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLARICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNTMFGSQHQMDVAFLEKLIKDDIERGRLPLLLVANAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAATKCDSMTLTPGPWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPADKLRALPLWLSLQYLGLDGIVERIKHACQLSQRLQESLKKVDHIKILVEDELSSPVVVFRFFQELPGSDPGPNVVPAPSVAPSAVGRERHSCDALNRWLGEQLKQLVPASGLTVMDLEVEGTCVRFSPLMTAAALGTRAEDMDQLVACIHGKLPLLTCTLQLREEFKQEVAGTAGLLYVDDPNWPGIGVVRYEHANDDKNSLKLDPEGEKIHAGLLKKLNELESDLTFKMGPEYKSMKSCIYIGMASDDVDVSELVETIAATAREIEENSRLLENMTEVVRKGIQEAQVQLQKANEERLLEEGVLRQIPVVGSVLNWFSPVQASQKGRTFNLTAGSLESTEHTYVYKVQGSGVTPPQTPSAARTRQRLPGQKPFKRSLRGSDAVSETSSVSHVDDLEKMEHLSGGQDAPEADSPEQHPGPPAAEAEQPRALQDGAQRPDDGRPQVEDPENLR", "length": 863, "header": "tr|A0A8W4FN22-1|A0A287B2K7_PIG Computationally mapped isoform of Pyridoxal-dependent decarboxylase domain-containing protein 1 OS=Sus scrofa OX=9823 GN=PDXDC1 PE=1 SV=1 CANONICAL=A0A287B2K7-1" }, "locus": { "chromosome": "3", "start_pos": 7519081, "end_pos": 7407930, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000099288.1", "url": "https://www.ensembl.org/id/ENSSSCT00000099288.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080754.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080754.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R089", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R089" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100622608", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622608", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "pyridoxal phosphate binding", "id": "GO:0030170", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030170", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2K7", "url": "https://www.uniprot.org/uniprotkb/A0A287B2K7" } ], "pmid": "" }, { "name": "carboxy-lyase activity", "id": "GO:0016831", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016831", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2K7", "url": "https://www.uniprot.org/uniprotkb/A0A287B2K7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "carboxylic acid metabolic process", "id": "GO:0019752", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019752", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2K7", "url": "https://www.uniprot.org/uniprotkb/A0A287B2K7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2K7", "url": "https://www.uniprot.org/uniprotkb/A0A287B2K7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 608, "end_pos": 610, "annotation": "n_glycosylation_sequon" }, { "start_pos": 664, "end_pos": 666, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287B2K7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B2K7" }, { "id": "PF22937", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22937" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PDXDC1-like third", "eco_id": "ECO_0000259", "start_pos": 499, "end_pos": 604, "start_aa": "Phe", "end_aa": "Arg", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A287B2K7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B2K7" }, { "id": "PF22930", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22930" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PDXDC1/PDXD2 second", "eco_id": "ECO_0000259", "start_pos": 387, 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{ "database": "Ensembl Peptide", "id": "ENSSSCP00000066335.2", "url": "https://www.ensembl.org/id/ENSSSCP00000066335.2" } ] } }, { "isoform_ac": "A0A5G2QXX3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QXX3/entry", "sequence": { "sequence": "MGSCGRGSGPPLSLLLLAVLLAVPGAGAAPRSALYSSSDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWKALANDVKDWRPALNLAALDCAEETNNAVCREFDIPGFPTVRVCDQEGRGTWGAAPLELAGADVQTLRERLIDALETHSDTWPPACPPLEPARLEEITGFFARNSEEYLALIFEKEGSYLGREVALDLSQRQGIAVRRVLNTERNVVSKFSVTDFPSCYLLFRNGSFSRVPVLMESRSFYTAYLQRLSGVIRKPVPTTTVPTTTRTVAPTVWKVADPSKIYMADLESALHYILRVEVGKFSVLEGQRLVALKKFVAVLAQYFPGQPLVQNFLHSVNDWLKKQPRKKIPYGFFKTVLDNRKEGAVIADKVNWVGCQGSEPHFRGFPCSLWILFHFLTVQASRQSVDPSQETAKAQEVLQAIRGYVRFFFGCRDCAAHFEKMASGSMHRVGSPNSAVLWLWSSHNKVNARLAGAPSEDPQFPKVQWPPRELCPACHNELRGAPVWDLGNSLNFLKTHFSPSNIVLDLPSARLGPQRGAQRMAVNPEQVELELAAGNFTLGPPEKVEIMLGPGTESPGATIPDVPAEEPGASHPQERQDPPEYIAELQRDELEQPVGQQRLTRRDTGAVLLAEFLAEKTLPRGPSELRRVGRSSKQLASIPDGEPKPGAMPGRGQWLQVLEGNFSHLDISLCVGLYSLSFMGLLAAYTYFRARIRALKGHASHPAA", "length": 742, "header": "tr|A0A5G2QXX3-1|A0A5G2QNR8_PIG Computationally mapped isoform of Sulfhydryl oxidase OS=Sus scrofa OX=9823 GN=QSOX1 PE=1 SV=1 CANONICAL=A0A5G2QNR8-1" }, "locus": { "chromosome": "9", "start_pos": 121821749, "end_pos": 121779881, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070443.2", "url": "https://www.ensembl.org/id/ENSSSCT00000070443.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069728.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069728.1" } ] } }, { "isoform_ac": "F1S682-1", "url": "https://www.uniprot.org/uniprotkb/F1S682/entry", "sequence": { "sequence": "MGSCGRGSGPPLSLLLLAVLLAVPGAGAAPRSALYSSSDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWKALANDVKDWRPALNLAALDCAEETNNAVCREFDIPGFPTVRFFKAFSRTGSGATLPVAGADVQTLRERLIDALETHSDTWPPACPPLEPARLEEITGFFARNSEEYLALIFEKEGSYLGREVALDLSQRQGIAVRRVLNTERNVVSKFSVTDFPSCYLLFRNGSFSRVPVLMESRSFYTAYLQRLSGVIRKPVPTTTVPTTTRTVAPTVWKVADPSKIYMADLESALHYILRVEVGKFSVLEGQRLVALKKFVAVLAQYFPGQPLVQNFLHSVNDWLKKQPRKKIPYGFFKTVLDNRKEGAVIADKVNWVGCQGSEPHFRGFPCSLWILFHFLTVQASRQSVDPSQETAKAQEVLQAIRGYVRFFFGCRDCAAHFEKMASGSMHRVGSPNSAVLWLWSSHNKVNARLAGAPSEDPQFPKVQWPPRELCPACHNELRGAPVWDLGNSLNFLKTHFSPSNIVLDLPSARLGPQRGAQRMAVNPEQVELELAAGNFTLGPPEKVEIMLGPGTESPGATIPDVPAEEPGASHPQERQDPPEYIAELQRDELEQPVGQQRLTRRDTGAVLLAEFLAEKTLPRGPSELRRVGRSSKQLASIPDGEPKPGAMPGRGQWLQVLEGNFSHLDISLCVGLYSLSFMGLLAAYTYFRARIRALKGHASHPAA", "length": 741, "header": "tr|F1S682-1|A0A5G2QNR8_PIG Computationally mapped isoform of Sulfhydryl oxidase OS=Sus scrofa OX=9823 GN=QSOX1 PE=1 SV=2 CANONICAL=A0A5G2QNR8-1" }, "locus": { "chromosome": "9", "start_pos": 121821749, "end_pos": 121779881, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016924.5", "url": "https://www.ensembl.org/id/ENSSSCT00000016924.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016471.2", "url": "https://www.ensembl.org/id/ENSSSCP00000016471.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QXX3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QXX3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-114608", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-114608", "resource": "Reactome", "description": "Platelet degranulation" }, { "id": "R-SSC-381426", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-381426", "resource": "Reactome", "description": "Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)" }, { "id": "R-SSC-6798695", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798695", "resource": "Reactome", "description": "Neutrophil degranulation" }, { "id": "R-SSC-8957275", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8957275", "resource": "Reactome", "description": "Post-translational protein phosphorylation" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Y248-1", "protein_name": "Sulfhydryl oxidase", "gene_name": "QSOX1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MWRRRARSGGGGGGGGAAPRCRWWPAVLALLAAALPAARSRSLYSPSDPLELLGADTAERRLLGSPSAWAVEFFASWCGHCIHFAPTWRALAEDVREWRPAVMIAALDCADEANQQVCADFGITGFPTLKFFRAFSKKAEDGIRIAHPTATVADLRRAIITNLEQSGDAWPPACPPLEPASAEEVRSFFHRNTERYLALIFEQSNSFVGREVALDLLQYENVAVRRVLSSEEELVEKFGVTTFPSAYLLLRNGSFSRLPVHAEARSFYTYYLQTLSGVTRGSYRLNVTSSAINETRALQPAQADRSKVYVADLESTVHYTLRVEAGRPAVLAGAQLAALKCYVATLAKYFPGRPSVQTFLQSLDSWLRNWTEPELPRSALKEAVKNKEDASPAAVLPTNVTWVGCRGSEPHFRGYPCGLWTIFHLLTVQAAQGGPDEELPLEVLNTMRCYVKHFFGCQECAQHFEAMAAKSMDQVKSRREAVLWLWSHHNEVNARLAGGDTEDPQFPKLQWPPPDMCPQCHREERGVHTWDEAAVLSFLKEHFSLGNLYLDHAIPIPMAGEEAAASARLSTAGLREKEEEERKEEEEEGEKETEKPHREGETGRPGSSELRRPSIVRRNPRLRALGEDIVDLDSFSEQHFKSKALRAAGRHRRLSKRDTVALHHDAGWERLQVPESREEEEEGGVLRRSPWLRVLGLGFSRLDVSLCIALYFLSSMCLLGMYTFFRLRTRARKGRPGFPVA", "length": 741 }, "evidence": [ { "id": "A0A5G2QNR8", "url": "https://omabrowser.org/oma/group/A0A5G2QNR8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "B0UXN0-1", "protein_name": "Sulfhydryl oxidase", "gene_name": "qsox1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MARRGCGATSCYTTKTKLNSFYSFLCAFITCVSLCPVLCEAGLYTASDQVIVLTPENVDSTLFNNTAALLVEFYATWCGHCIAFSPVWKSLARDIKEWKPAVDLAAIDCANESNRKVCTNFGITGYPSIKFFHAYSSIGSRGLEVRGFSRDVRGLRQYIIENLELHTEAWPPACPPLETASEAEVHHFFPANNVKYLALVFENKKSYVGREVTLDLLQYENIAVRRVLDTETNLVSRFGVTEFPSCYLYDSSGNITRLKVLKEARTFYSYALQRLPGVVRTGKHQTPITELIKNSTLQEWRPFNKSRVYMSDLESALHYSLRVELSSHTSISGDDLIALKKYINVLAKYFPGRPSVKSALQAVDSWLQSQKGTEIKYSDFRDVLDNVVQTSDAVLPEGVQWVGCQGSQARYRGYPCAVWTLFHVLTVQAKEMGSTVSEPQEVLLAMRGYVSSFFGCRPCATHFEAMAAESMDQVNSLSGAVIWLWSRHNRVNNRLAGDLSEDPHFPKIQWPSPELCPSCHGVTIIGDHNWIKDEVPQFLQNYFSSSRILNDYLQDETQALIQQRNRLTAARMEKEAGRGADRRARDIFDNNPADEPQEEEEEEEEEEPTFEEQAVEPYPAGLEGAPGADQAPWEKPQPLSSQRKPKIVGMKLREAQEDIVDLDYFVSQHYKAKALRAAAMSGVVRRRSLQKKEDVEDLQFEGGWRVKRDLGSQEENFGIEPYPRAQSKHWMSLLSVGFSRLDVSLCVLLYLLSTMCLLAMYMYFKLRIKLRSAKVSLP", "length": 778 }, "evidence": [ { "id": "A0A5G2QNR8", "url": "https://omabrowser.org/oma/group/A0A5G2QNR8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "O00391-1", "protein_name": "Sulfhydryl oxidase 1", "gene_name": "QSOX1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRRCNSGSGPPPSLLLLLLWLLAVPGANAAPRSALYSPSDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWKALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGFPTVRFFKAFTKNGSGAVFPVAGADVQTLRERLIDALESHHDTWPPACPPLEPAKLEEIDGFFARNNEEYLALIFEKGGSYLGREVALDLSQHKGVAVRRVLNTEANVVRKFGVTDFPSCYLLFRNGSVSRVPVLMESRSFYTAYLQRLSGLTREAAQTTVAPTTANKIAPTVWKLADRSKIYMADLESALHYILRIEVGRFPVLEGQRLVALKKFVAVLAKYFPGRPLVQNFLHSVNEWLKRQKRNKIPYSFFKTALDDRKEGAVLAKKVNWIGCQGSEPHFRGFPCSLWVLFHFLTVQAARQNVDHSQEAAKAKEVLPAIRGYVHYFFGCRDCASHFEQMAAASMHRVGSPNAAVLWLWSSHNRVNARLAGAPSEDPQFPKVQWPPRELCSACHNERLDVPVWDVEATLNFLKAHFSPSNIILDFPAAGSAARRDVQNVAAAPELAMGALELESRNSTLDPGKPEMMKSPTNTTPHVPAEGPEASRPPKLHPGLRAAPGQEPPEHMAELQRNEQEQPLGQWHLSKRDTGAALLAESRAEKNRLWGPLEVRRVGRSSKQLVDIPEGQLEARAGRGRGQWLQVLGGGFSYLDISLCVGLYSLSFMGLLAMYTYFQAKIRALKGHAGHPAA", "length": 747 }, "evidence": [ { "id": "A0A5G2QNR8", "url": "https://omabrowser.org/oma/group/A0A5G2QNR8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6IUU3-1", "protein_name": "Sulfhydryl oxidase 1", "gene_name": "Qsox1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRRCGRHSGPPSLLLLLLLLPPLLLSVPGAYAARLSVLYSSSDPLTLLDADTVRPAVLGSSSAWAVEFFASWCGHCIAFAPTWKELANDVKDWRPALNLAVLDCADETNSAVCREFNIAGFPTVRFFKAFSKNGTGTALPAAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLKDINEFFTRSKAEYLALIFEREDSYLGREVTLDLSQFHAVAVRRVLNSESDVVSKFAVTDFPSCYLLLRNGSVSRVPVLVESRPFYTSYLRGLPGLTREAPPTTAAPVTPDKIAPTVWKFADRSKIYMADLESALHYILRVEVGKFSVLEGQRLVALKKFVAVLAKYFPGQPLVQNFLHSINDWLQKQQKKKIPYSYFKAALDSRKENAVLAEKVNWIGCQGSEPHFRGFPCSLWVLFHFLTVQAHRYSEAHPQEPADGQEVLQAMRSYVQSFFGCRDCANHFEQMAAASMHQVKSPSNAVLWLWTSHNRVNARLSGALSEDPQFPKVQWPPRELCSACHNEVNGQVPLWDLGATLNFLKAHFSPANIVRDPPAPGPASRRGTQDPEASPNLVMDTLKLETGNSVLGHEQAASAASPGATALDVPAGKPEASGPQELNAGLSMGGASPGQGPPEHTEELLRDVQENAQGQQHLSKRDTEALLLPEVNHLQGPLAPRRGGHSPKQLASILEGEPEALAIQGRRQWLQVLGGGVSFLDISLCVGLYSVSFMGLLAMYTYFRARMRTPKGHVSYPTA", "length": 750 }, "evidence": [ { "id": "A0A5G2QNR8", "url": "https://omabrowser.org/oma/group/A0A5G2QNR8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8BND5-1", "protein_name": "Sulfhydryl oxidase 1", "gene_name": "Qsox1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRRCGRLSGPPSLLLLLLLLSPLLFSGPGAYAARLSVLYSSSDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHCIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTRNKADYLALVFEREDSYLGREVTLDLSQYHAVAVRRVLNTESDLVNKFGVTDFPSCYLLLRNGSVSRVPVLVESRSFYTSYLRGLPGLTRDAPPTTATPVTADKIAPTVWKFADRSKIYMADLESALHYILRVEVGKFSVLEGQRLVALKKFVAVLAKYFPGQPLVQNFLHSINDWLQKQQKKRIPYSFFKAALDSRKEDAVLTEKVNWVGCQGSEPHFRGFPCSLWVLFHFLTVQANRYSEAHPQEPADGQEVLQAMRSYVQFFFGCRDCADHFEQMAAASMHQVRSPSNAILWLWTSHNRVNARLSGALSEDPHFPKVQWPPRELCSACHNELNGQVPLWDLGATLNFLKAHFSPANIVIDSSASRHTGRRGSPEATPELVMDTLKLESRNSVLGHEQAASAESPGATALDVPAEKPEASGPQELYTGLRMGGASPGQGPPERMEDHQRDMQENAPGQQHLSKRDTEALFLPEVNHLQGPLELRRGGRSPKQLAPILEEEPEALAIQGQGQWLQVLGGGISHLDISLCVGLYSVSFMGLLAMYTYFRARLRTPKGHASYPTA", "length": 748 }, "evidence": [ { "id": "A0A5G2QNR8", "url": "https://omabrowser.org/oma/group/A0A5G2QNR8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNR8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNR8" } ], "pmid": "" }, { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNR8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNR8" } ], "pmid": "" }, { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNR8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNR8" } ], "pmid": "" }, { "name": "extracellular exosome", "id": "GO:0070062", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070062", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNR8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNR8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "flavin-dependent sulfhydryl oxidase activity", "id": "GO:0016971", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016971", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNR8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNR8" } ], "pmid": "" }, { "name": "FAD binding", "id": "GO:0071949", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071949", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNR8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNR8" } ], "pmid": "" }, { "name": "protein disulfide isomerase activity", "id": "GO:0003756", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003756", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNR8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNR8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "extracellular matrix assembly", "id": "GO:0085029", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0085029", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNR8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNR8" } ], "pmid": "" }, { "name": "protein folding", "id": "GO:0006457", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006457", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNR8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNR8" } ], "pmid": "" }, { "name": "negative regulation of macroautophagy", "id": "GO:0016242", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016242", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNR8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNR8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 243, "end_pos": 245, "annotation": "n_glycosylation_sequon" }, { "start_pos": 573, "end_pos": 575, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "17357", "name": "", "equation": "2 R'C(R)SH + O2 = R'C(R)S-S(R)CR' + H2O2", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "17357", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/17357" } ] }, { "id": "R-SSC-481007", "name": "Exocytosis of platelet alpha granule contents", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-481007", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-481007" } ] }, { "id": "R-SSC-6798745", "name": "Exocytosis of tertiary granule lumen proteins", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "extracellular region, tertiary granule lumen", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6798745", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798745" } ] }, { "id": "R-SSC-6798749", "name": "Exocytosis of specific granule lumen proteins", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "extracellular region, specific granule lumen", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6798749", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798749" } ] }, { "id": "R-SSC-8952289", "name": "FAM20C phosphorylates FAM20C substrates", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "endoplasmic reticulum lumen", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-8952289", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8952289" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QNR8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 608, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QNR8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QNR8" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QNR8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNR8" }, { "id": "PS51324", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51324" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "ERV/ALR sulfhydryl oxidase", "eco_id": "ECO_0000259", "start_pos": 396, "end_pos": 503, "start_aa": "Ser", "end_aa": "Trp", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A5G2QNR8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNR8" }, { "id": "PS51352", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51352" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Thioredoxin", "eco_id": "ECO_0000259", "start_pos": 17, "end_pos": 156, "start_aa": "Leu", "end_aa": "Thr", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 243, "end_pos": 245 }, { "start_pos": 573, "end_pos": 575 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QNY4-1", "uniprot_ac": "A0A5G2QNY4", "uniprot_id": "A0A5G2QNY4_PIG", "mass": { "chemical_mass": 48239.0, "monoisotopic_mass": 48239.0 }, "refseq": {}, "gene_names": [ { "name": "KRT20", "type": "recommended", "evidence": [ { "id": "A0A5G2QNY4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNY4" } ] } ], "protein_names": [ { "name": "Keratin, type I cytoskeletal 20", "type": "recommended", "evidence": [ { "id": "A0A5G2QNY4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNY4/entry#names_and_taxonomy" } ] }, { "name": "Cytokeratin-20", "type": "synonym", "evidence": [ { "id": "A0A5G2QNY4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNY4/entry#names_and_taxonomy" } ] }, { "name": "Keratin-20", "type": "synonym", "evidence": [ { "id": "A0A5G2QNY4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNY4/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Plays a significant role in maintaining keratin filament organization in intestinal epithelia. When phosphorylated, plays a role in the secretion of mucin in the small intestine.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QPZ4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPZ4#function" }, { "database": "UniProtKB", "id": "ARBA00037685", "url": "https://www.uniprot.org/uniprotkb/ARBA00037685#function" }, { "database": "UniProtKB", "id": "F1RXG4", "url": "https://www.uniprot.org/uniprotkb/F1RXG4#function" }, { "database": "UniProtKB", "id": "A0A5G2QNY4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNY4#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNY4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNY4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KRT20", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNY4", "locus": { "chromosome": "12", "start_pos": 21594854, "end_pos": 21584814, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000017459", "url": "https://www.ensembl.org/id/ENSSSCG00000017459" } ] } } ], "crossref": [ { "id": "A0A5G2QNY4", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QNY4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000017459", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000017459", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100520330", "url": "https://www.ncbi.nlm.nih.gov/gene/100520330", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002957", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002957", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018039", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018039", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039008", "url": 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"categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6805567", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6805567", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-6809371", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6809371", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QNY4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNY4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QNY4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNY4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QPZ4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPZ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QPZ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPZ4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RXG4", "url": "https://www.uniprot.org/uniprotkb/F1RXG4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RXG4-1", "url": "https://www.uniprot.org/uniprotkb/F1RXG4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDFNQKSFRRTLSSSSQGPALSIGGTQYLGAAPSVYGGAGGHGTRISTSRRVVSYGSDQAEGNLWVGNEKMTMKNLNDRLASYLEKVRSLEQSNSKFELQIKQWYESNTPGISRDHSAYLQQIQDLRNQIRDAQLQNARCVLQIDNAKLAAEDFRLKYETERGIRLAVEADLQGLHNVFDDLTLTKTDLEIQIEELNKDLALLQKEHEEEVQSLRAHLGNNVNVEVDAAPSLNLSAIMSEMRQKYEAMAQENLQKAKEQFQLQIETLQQEVTVSTEELKGAKDEVKNHRRTYQSLEIELQSHLSTKAALEHTLEETKARYGAYLAKLQTQINSLEDQLVQIRTDTEHQINEYNILLDIKTRLEQEIATYRRLLEGEDYKTTEYQLSTLEEKDIKKTRKIKTVVQEVVDGKVVSSEVKEVEESI", "length": 423, "header": "tr|A0A5G2QNY4-1|A0A5G2QNY4_PIG Isoform 1 of Keratin, type I cytoskeletal 20 OS=Sus scrofa OX=9823 GN=KRT20 PE=1 SV=1 CANONICAL=A0A5G2QNY4-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QNY4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNY4/entry", "sequence": { "sequence": "MDFNQKSFRRTLSSSSQGPALSIGGTQYLGAAPSVYGGAGGHGTRISTSRRVVSYGSDQAEGNLWVGNEKMTMKNLNDRLASYLEKVRSLEQSNSKFELQIKQWYESNTPGISRDHSAYLQQIQDLRNQIRDAQLQNARCVLQIDNAKLAAEDFRLKYETERGIRLAVEADLQGLHNVFDDLTLTKTDLEIQIEELNKDLALLQKEHEEEVQSLRAHLGNNVNVEVDAAPSLNLSAIMSEMRQKYEAMAQENLQKAKEQFQLQIETLQQEVTVSTEELKGAKDEVKNHRRTYQSLEIELQSHLSTKAALEHTLEETKARYGAYLAKLQTQINSLEDQLVQIRTDTEHQINEYNILLDIKTRLEQEIATYRRLLEGEDYKTTEYQLSTLEEKDIKKTRKIKTVVQEVVDGKVVSSEVKEVEESI", "length": 423, "header": "tr|A0A5G2QNY4-1|A0A5G2QNY4_PIG Isoform 1 of Keratin, type I cytoskeletal 20 OS=Sus scrofa OX=9823 GN=KRT20 PE=1 SV=1 CANONICAL=A0A5G2QNY4-1" }, "locus": { "chromosome": "12", "start_pos": 21592788, "end_pos": 21584869, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082542.1", "url": "https://www.ensembl.org/id/ENSSSCT00000082542.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065775.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065775.1" } ] } }, { "isoform_ac": "A0A5G2QPZ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPZ4/entry", "sequence": { "sequence": "MDFNQKSFRRTLSSSSQGPALSISSSIYRKGGTQYLGAAPSVYGGAGGHGTRISTSRRVVSYGSDQAEGNLWVGNEKMTMKNLNDRLASYLEKVRSLEQSNSKFELQIKQWYESNTPGISRDHSAYLQQIQDLRNQIRDAQLQNARCVLQIDNAKLAAEDFRLKYETERGIRLAVEADLQGLHNVFDDLTLTKTDLEIQIEELNKDLALLQKEHEEEVQSLRAHLGNNVNVEVDAAPSLNLSAIMSEMRQKYEAMAQENLQKAKEQFQLQEVTPISPLLPSLLPFLSPPPTLPSFLFFSSLPYYYFFFSFLLKGAKDEVKNHRRTYQSLEIELQSHLSTKAALEHTLEETKARYGAYLAKLQTQINSLEDQLVQIRTDTEHQINEYNILLDIKTRLEQEIATYRRLLEGEDYKTTEYQLSTLEEKDIKKTRKIKTVVQEVVDGKVVSSEVKEVEESI", "length": 457, "header": "tr|A0A5G2QPZ4-1|A0A5G2QNY4_PIG Computationally mapped isoform of Keratin, type I cytoskeletal 20 OS=Sus scrofa OX=9823 GN=KRT20 PE=1 SV=1 CANONICAL=A0A5G2QNY4-1" }, "locus": { "chromosome": "12", "start_pos": 21592788, "end_pos": 21584869, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090540.1", "url": "https://www.ensembl.org/id/ENSSSCT00000090540.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066131.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066131.1" } ] } }, { "isoform_ac": "F1RXG4-1", "url": "https://www.uniprot.org/uniprotkb/F1RXG4/entry", "sequence": { "sequence": "MDFNQKSFRRTLSSSSQGPALSISSSIYRKGGTQYLGAAPSVYGGAGGHGTRISTSRRVVSYGSDQAEGNLWVGNEKMTMKNLNDRLASYLEKVRSLEQSNSKFELQIKQWYESNTPGISRDHSAYLQQIQDLRNQIRDAQLQNARCVLQIDNAKLAAEDFRLKYETERGIRLAVEADLQGLHNVFDDLTLTKTDLEIQIEELNKDLALLQKEHEEEVQSLRAHLGNNVNVEVDAAPSLNLSAIMSEMRQKYEAMAQENLQKAKEQFQLQIETLQQEVTVSTEELKGAKDEVKNHRRTYQSLEIELQSHLSTKAALEHTLEETKARYGAYLAKLQTQINSLEDQLVQIRTDTEHQINEYNILLDIKTRLEQEIATYRRLLEGEDYKTTEYQLSTLEEKDIKKTRKIKTVVQEVVDGKVVSSEVKEVEESI", "length": 430, "header": "tr|F1RXG4-1|A0A5G2QNY4_PIG Computationally mapped isoform of Keratin, type I cytoskeletal 20 OS=Sus scrofa OX=9823 GN=KRT20 PE=1 SV=3 CANONICAL=A0A5G2QNY4-1" }, "locus": { "chromosome": "12", "start_pos": 21592788, "end_pos": 21584869, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000019007.4", "url": "https://www.ensembl.org/id/ENSSSCT00000019007.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000018502.3", "url": "https://www.ensembl.org/id/ENSSSCP00000018502.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QPZ4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPZ4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100520330", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520330", "resource": "KEGG Pathway" }, { "id": "R-SSC-6805567", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6805567", "resource": "Reactome", "description": "Keratinization" }, { "id": "R-SSC-6809371", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6809371", "resource": "Reactome", "description": "Formation of the cornified envelope" } ], "orthologs": [ { "uniprot_canonical_ac": "F1MPK1-1", "protein_name": "Keratin, type I cytoskeletal 20", "gene_name": "KRT20", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "VDFSQRSFHRSLSSSSQSPGLSMSSSIYRRGVAPSVYGGAGGHGTRISTSRHLANYGSDPAGGNLFAGNEKMTMQNLNDRLASYLERVRSLEQSNSHLEQQIKHWYETNTPSTGRDHSAYMGQIKELRDQIKDAQLQNARCVLQIDNAKLAMEDFRLKYEAERGICQTVVADLHGLKRVFDELTLTKADLEIQIEELTKDLHLLQKEHEEEVRSLRAHLGNNVNVEVDAPPSLNLGAIMNEMRQKYDAMAQENLQKAKEQFEIQINDLQQQVTVSTEELKGTKDQIKEQRHTYQVLELELQSLLNMKEALEHTLEETNARYGSHLAKIQARLNSLEGQLVQVRTDTERQIHEYNILLDIKIRLEQEIATYRRLLEGEDVKEYQLSTLDEKDIKKTRKIKTVVQEVVDGKVVSSEVKEVEESV", "length": 422 }, "evidence": [ { "id": "A0A5G2QNY4", "url": "https://omabrowser.org/oma/group/A0A5G2QNY4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P25030-1", "protein_name": "Keratin, type I cytoskeletal 20", "gene_name": "Krt20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDFSRRSFHRSLSSSSQGPALSTSGSLYRKGTMQRLGLHSVYGGWRHGTRISVSKTTMSYGNHLSNGGDLFGGNEKLAMQNLNDRLASYLEKVRSLEQSNSKLEAQIKQWYETNAPSTIRDYSSYYAQIKELQDQIKDAQIENARCVLQIDNAKLAAEDFRLKFETERGMRITVEADLQGLSKVYDDLTLQKTDLEIQIEELNKDLALLKKEHQEEVEVLRRQLGNNVNVEVDAAPGLNLGEIMNEMRQKYEILAQKNLQEAKEQFERQTQTLEKQVTVNIEELRGTEVQVTELRRSYQTLEIELQSQLSMKESLERTLEETKARYASQLAAIQEMLSSLEAQLMQIRSDTERQNQEYNILLDIKTRLEQEIATYRRLLEGEDIKTTEYQLNTLEAKDIKKTRKIKTVVEEVVDGKVVSSEVKEIEENI", "length": 429 }, "evidence": [ { "id": "A0A5G2QNY4", "url": "https://omabrowser.org/oma/group/A0A5G2QNY4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P35900-1", "protein_name": "Keratin, type I cytoskeletal 20", "gene_name": "KRT20", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDFSRRSFHRSLSSSLQAPVVSTVGMQRLGTTPSVYGGAGGRGIRISNSRHTVNYGSDLTGGGDLFVGNEKMAMQNLNDRLASYLEKVRTLEQSNSKLEVQIKQWYETNAPRAGRDYSAYYRQIEELRSQIKDAQLQNARCVLQIDNAKLAAEDFRLKYETERGIRLTVEADLQGLNKVFDDLTLHKTDLEIQIEELNKDLALLKKEHQEEVDGLHKHLGNTVNVEVDAAPGLNLGVIMNEMRQKYEVMAQKNLQEAKEQFERQTAVLQQQVTVNTEELKGTEVQLTELRRTSQSLEIELQSHLSMKESLEHTLEETKARYSSQLANLQSLLSSLEAQLMQIRSNMERQNNEYHILLDIKTRLEQEIATYRRLLEGEDVKTTEYQLSTLEERDIKKTRKIKTVVQEVVDGKVVSSEVKEVEENI", "length": 424 }, "evidence": [ { "id": "A0A5G2QNY4", "url": "https://omabrowser.org/oma/group/A0A5G2QNY4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9D312-1", "protein_name": "Keratin, type I cytoskeletal 20", "gene_name": "Krt20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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differentiation", "id": "GO:0030855", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030855", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNY4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNY4" } ], "pmid": "" }, { "name": "regulation of protein secretion", "id": "GO:0050708", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050708", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNY4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNY4" } ], "pmid": "" }, { "name": "cellular response to starvation", "id": "GO:0009267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009267", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNY4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNY4" } ], "pmid": "" }, { "name": "intermediate filament organization", "id": "GO:0045109", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045109", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNY4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNY4" } ], "pmid": "" }, { 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"field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QP73-1", "uniprot_ac": "A0A5G2QP73", "uniprot_id": "A0A5G2QP73_PIG", "mass": { "chemical_mass": 80029.0, "monoisotopic_mass": 80029.0 }, "refseq": { "ac": "XP_003354323", "name": "kinesin-like protein KIF3A isoform X5", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003354323" }, "gene_names": [ { "name": "KIF3A", "type": "recommended", "evidence": [ { "id": "A0A5G2QP73", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73" } ] }, { "name": "KIF3A", "type": "synonym", "evidence": [ { "id": "XP_003354323", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003354323" } ] } ], "protein_names": [ { "name": "Kinesin-like protein", "type": "recommended", "evidence": [ { "id": "A0A5G2QP73", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73/entry#names_and_taxonomy" } ] }, { "name": "kinesin-like protein KIF3A isoform X5", "type": "synonym", "evidence": [ { "id": "XP_003354323", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003354323" } ] } ], "function": [ { "annotation": "Microtubule-based anterograde translocator for membranous organelles. Plus end-directed microtubule sliding activity in vitro. Plays a role in primary cilia formation. Plays a role in centriole cohesion and subdistal appendage organization and function. Regulates the formation of the subdistal appendage via recruitment of DCTN1 to the centriole. Also required for ciliary basal feet formation and microtubule anchoring to mother centriole.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2RB39", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RB39#function" }, { "database": "UniProtKB", "id": "ARBA00058965", "url": "https://www.uniprot.org/uniprotkb/ARBA00058965#function" }, { "database": "UniProtKB", "id": "A0A5G2QP73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73#function" }, { "database": "UniProtKB", "id": "A0A287A7U4", "url": "https://www.uniprot.org/uniprotkb/A0A287A7U4#function" }, { "database": "UniProtKB", "id": "F1RJV1", "url": "https://www.uniprot.org/uniprotkb/F1RJV1#function" }, { "database": "UniProtKB", "id": "A0A5G2QEV2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEV2#function" }, { "database": "UniProtKB", "id": "A0A5G2QGE9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGE9#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KIF3A", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73", "locus": { "chromosome": "2", "start_pos": 134932615, "end_pos": 135069377, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000014283", "url": "https://www.ensembl.org/id/ENSSSCG00000014283" } ] } } ], "crossref": [ { "id": "A0A5G2QP73", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QP73", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000014283", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000014283", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd01371", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01371", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100525739", "url": "https://www.ncbi.nlm.nih.gov/gene/100525739", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001752", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001752", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019821", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019821", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027640", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027640", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036961", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036961", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "NMRKHIE", "url": "https://omabrowser.org/oma/group/NMRKHIE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QP73", "url": "https://www.orthodb.org/?gene=A0A5G2QP73", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR47969", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47969", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47969:SF21", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47969:SF21", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00225", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00225", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-2132295", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2132295", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-5610787", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5610787", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-5620924", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5620924", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-5635838", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5635838", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-6811434", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6811434", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-983189", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983189", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003354323", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003354323", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287A7U4", "url": "https://www.uniprot.org/uniprotkb/A0A287A7U4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A7U4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A7U4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QEV2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEV2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QEV2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEV2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QGE9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGE9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QGE9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGE9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QP73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QP73-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RB39", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RB39", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RB39-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RB39-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RJV1", "url": "https://www.uniprot.org/uniprotkb/F1RJV1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RJV1-1", "url": "https://www.uniprot.org/uniprotkb/F1RJV1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPINKSEKPESCDNVKVVVRCRPLNEREKSMCYKQAVSVDEMRGTITVHKTDSSNEPPKTFTFDTVFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPELRGIIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLLGKDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGVDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPKDALLRQFQKEIEELKKKLEEGEEISGSDISGSEEEEDEEGEVGEDGEKRKKRRGKKKVSPDKMVEMQAKIDEERKALETKLDMEEEERNKARAELEKREKDLLKAQQEHQSLLEKLSALEKKVIVGGVDLLAKAEEQEKLLEESNMELEERRKRAEQLRRELEEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHQREIEGLLENIRQLSRELRLQMLIIDNFIPQDYQEMIENYVHWNEDIGEWQLKCVAYTGNNMRKQTPVPDKKEKDPFEVDLSHVYLAYTEESLRQSLMKLERPRTSKGKARPKTGRRKRSTKPETVIDSLLQ", "length": 699, "header": "tr|A0A5G2QP73-1|A0A5G2QP73_PIG Isoform 1 of Kinesin-like protein OS=Sus scrofa OX=9823 GN=KIF3A PE=1 SV=1 CANONICAL=A0A5G2QP73-1" }, "isoforms": [ { "isoform_ac": "A0A287A7U4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A7U4/entry", "sequence": { "sequence": "MPINKSEKPESCDNVKVVVRCRPLNEREKSMCYKQAVSVDEMRGTITVHKTDSSNEPPKTFTFDTVFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPELRGIIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLLGKDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGVDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPKDALLRQFQKEIEELKKKLEEGEEISGSDISGSEEEEDEEGEVGEDGEKRKKRRGKKKVSPDKMVEMQAKIDEERKALETKLDMEEEERNKARAELEKREKDLLKAQQEHQSLLEKLSALEKKVIVGGVDLLAKAEEQEKLLEESNMELEERRKRAEQLRRELEEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHQREIEGLLENIRQLSRELRLQMLIIDNFIPQDYQEMIENYVHWNEDIGEWQLKCVAYTGNNMRKQTPVPDKKEKDPFEVDLSHVYLAYTEESLRQSLMKLERPRTSKGKARPKTGRR", "length": 684, "header": "tr|A0A287A7U4-1|A0A5G2QP73_PIG Computationally mapped isoform of Kinesin-like protein OS=Sus scrofa OX=9823 GN=KIF3A PE=1 SV=1 CANONICAL=A0A5G2QP73-1" }, "locus": { "chromosome": "2", "start_pos": 135069218, "end_pos": 134933114, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061049.2", "url": "https://www.ensembl.org/id/ENSSSCT00000061049.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000040054.1", "url": "https://www.ensembl.org/id/ENSSSCP00000040054.1" } ] } }, { "isoform_ac": "A0A5G2QEV2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEV2/entry", "sequence": { "sequence": "MPTINKSEKPESCDNVKVVVRCRPLNEREKSMCYKQAVSVDEMRGTITVHKTDSSNEPPKTFTFDTVFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPELRGIIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLLGKDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGVDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPKDALLRQFQKEIEELKKKLEEGEEISGSDISGSEEEEDEEGEVGEDGEKRKKRRGKKKVSPDKMVEMQAKIDEERKALETKLDMEEEERNKARAELEKREKDLLKAQQEHQSLLEKLSALEKKVIVGGVDLLAKAEEQEKLLEESNMELEERRKRAEQLRRELEEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHQREIEGLLENIRQLSRELRLQMLIIDNFIPQDYQEMIENYVHWNEDIGEWQLKCVAYTGNNMRKQTPVPDKKEKDPFEVDLSHVYLAYTEESLRQSLMKLERPRTSKGKARPKTGRR", "length": 685, "header": "tr|A0A5G2QEV2-1|A0A5G2QP73_PIG Computationally mapped isoform of Kinesin-like protein OS=Sus scrofa OX=9823 GN=KIF3A PE=1 SV=1 CANONICAL=A0A5G2QP73-1" }, "locus": { "chromosome": "2", "start_pos": 135067523, "end_pos": 135004797, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079226.1", "url": "https://www.ensembl.org/id/ENSSSCT00000079226.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063231.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063231.1" } ] } }, { "isoform_ac": "A0A5G2QGE9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGE9/entry", "sequence": { "sequence": "MPLTSRGICAPEPSSGRRQSTGFLPYSRLLNRPINKSEKPESCDNVKVVVRCRPLNEREKSMCYKQAVSVDEMRGTITVHKTDSSNEPPKTFTFDTVFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPELRGIIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLLGKDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGVDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPKDALLRQFQKEIEELKKKLEEGEEISGSDISGSEEEEDEEGEVGEDGEKRKKRRGKFFLKVSPDKMVEMQAKIDEERKALETKLDMEEEERNKARAELEKREKDLLKAQQEHQSLLEKLSALEKKVIVGGVDLLAKAEEQEKLLEESNMELEERRKRAEQLRRELEEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHQREIEGLLENIRQLSRELRLQMLIIDNFIPQDYQEMIENYVHWNEDIGEWQLKCVAYTGNNMRKQTPVPDKKEKDPFEVDLSHVYLAYTEESLRQSLMKLERPRTSKGKARPKTGRRYTNPFGSLTFPVLMEILSS", "length": 736, "header": "tr|A0A5G2QGE9-1|A0A5G2QGE9_PIG Computationally mapped isoform of Kinesin-like protein OS=Sus scrofa OX=9823 GN=KIF3A PE=1 SV=2 CANONICAL=A0A5G2QP73-1" }, "locus": { "chromosome": "2", "start_pos": 135068857, "end_pos": 135003864, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071119.2", "url": "https://www.ensembl.org/id/ENSSSCT00000071119.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062877.2", "url": "https://www.ensembl.org/id/ENSSSCP00000062877.2" } ] } }, { "isoform_ac": "A0A5G2QP73-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73/entry", "sequence": { "sequence": "MPINKSEKPESCDNVKVVVRCRPLNEREKSMCYKQAVSVDEMRGTITVHKTDSSNEPPKTFTFDTVFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPELRGIIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLLGKDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGVDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPKDALLRQFQKEIEELKKKLEEGEEISGSDISGSEEEEDEEGEVGEDGEKRKKRRGKKKVSPDKMVEMQAKIDEERKALETKLDMEEEERNKARAELEKREKDLLKAQQEHQSLLEKLSALEKKVIVGGVDLLAKAEEQEKLLEESNMELEERRKRAEQLRRELEEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHQREIEGLLENIRQLSRELRLQMLIIDNFIPQDYQEMIENYVHWNEDIGEWQLKCVAYTGNNMRKQTPVPDKKEKDPFEVDLSHVYLAYTEESLRQSLMKLERPRTSKGKARPKTGRRKRSTKPETVIDSLLQ", "length": 699, "header": "tr|A0A5G2QP73-1|A0A5G2QP73_PIG Isoform 1 of Kinesin-like protein OS=Sus scrofa OX=9823 GN=KIF3A PE=1 SV=1 CANONICAL=A0A5G2QP73-1" }, "locus": { "chromosome": "2", "start_pos": 135069218, "end_pos": 135002534, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082251.2", "url": "https://www.ensembl.org/id/ENSSSCT00000082251.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063883.2", "url": "https://www.ensembl.org/id/ENSSSCP00000063883.2" } ] } }, { "isoform_ac": "A0A5G2RB39-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RB39/entry", "sequence": { "sequence": "MPLTSRGICAPEPSSGRRQSTGFLPYSRLLNRPINKSEKPESCDNVKVVVRCRPLNEREKSMCYKQAVSVDEMRGTITVHKTDSSNEPPKTFTFDTVFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPELRGIIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLLGKDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGVDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPKDALLRQFQKEIEELKKKLEEGEEISGSDISGSEEEEDEEGEVGEDGEKRKKRRGSSSSSSSDSTCSVIEKPLDKFLPSKKKVSPDKMVEMQAKIDEERKALETKLDMEEEERNKARAELEKREKDLLKAQQEHQSLLEKLSALEKKVIVGGVDLLAKAEEQEKLLEESNMELEERRKRAEQLRRELEEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHQREIEGLLENIRQLSRELRLQMLIIDNFIPQDYQEMIENYVHWNEDIGEWQLKCVAYTGNNMRKQTPVPDKKEKDPFEVDLSHVYLAYTEESLRQSLMKLERPRTSKGKARPKTGRRKRSTKPETVIDSLLQ", "length": 754, "header": "tr|A0A5G2RB39-1|A0A5G2QP73_PIG Computationally mapped isoform of Kinesin-like protein OS=Sus scrofa OX=9823 GN=KIF3A PE=1 SV=1 CANONICAL=A0A5G2QP73-1" }, "locus": { "chromosome": "2", "start_pos": 135068857, "end_pos": 135002534, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082654.1", "url": "https://www.ensembl.org/id/ENSSSCT00000082654.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071365.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071365.1" } ] } }, { "isoform_ac": "F1RJV1-1", "url": "https://www.uniprot.org/uniprotkb/F1RJV1/entry", "sequence": { "sequence": "MPINKSEKPESCDNVKVVVRCRPLNEREKSMCYKQAVSVDEMRGTITVHKTDSSNEPPKTFTFDTVFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPELRGIIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLLGKDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGVDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPKDALLRQFQKEIEELKKKLEEGKKKVSPDKMVEMQAKIDEERKALETKLDMEEEERNKARAELEKREKDLLKAQQEHQSLLEKLSALEKKVIVGGVDLLAKAEEQEKLLEESNMELEERRKRAEQLRRELEEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHQREIEGLLENIRQLSRELRLQMLIIDNFIPQDYQEMIENYVHWNEDIGEWQLKCVAYTGNNMRKQTPVPDKKEKDPFEVDLSHVYLAYTEESLRQSLMKLERPRTSKGKARPKTGRRKRSTKPETVIDSLLQ", "length": 666, "header": "tr|F1RJV1-1|A0A5G2QP73_PIG Computationally mapped isoform of Kinesin-like protein OS=Sus scrofa OX=9823 GN=KIF3A PE=1 SV=4 CANONICAL=A0A5G2QP73-1" }, "locus": { "chromosome": "2", "start_pos": 135069218, "end_pos": 135002534, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000015606.5", "url": "https://www.ensembl.org/id/ENSSSCT00000015606.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000015194.4", "url": "https://www.ensembl.org/id/ENSSSCP00000015194.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2RB39", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RB39" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-2132295", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2132295", "resource": "Reactome", "description": "MHC class II antigen presentation" }, { "id": "R-SSC-5610787", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5610787", "resource": "Reactome", "description": "Hedgehog 'off' state" }, { "id": "R-SSC-5620924", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5620924", "resource": "Reactome", "description": "Intraflagellar transport" }, { "id": "R-SSC-5635838", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5635838", "resource": "Reactome", "description": "Activation of SMO" }, { "id": "R-SSC-6811434", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6811434", "resource": "Reactome", "description": "COPI-dependent Golgi-to-ER retrograde traffic" }, { "id": "R-SSC-983189", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983189", "resource": "Reactome", "description": "Kinesins" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6AP89-1", "protein_name": "Kinesin-like protein", "gene_name": "Kif3a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPINKSEKPESCDNVKVVVRCRPLNEREKSMCYRQAVSVDEMRGTITVHKTDSSNEPPKTFTFDTVFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPGLRGVIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLLGKDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGVDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPKDALLRQFQKEIEELKKKLEEGEEVSGSDISGSEEDDNEEGELGEDGEKRKKRRGKKKVSPDKMMEMQAKIDEERKALETKLDMEEEERNKARAELERREKDLLKAQQEHQSLLEKLSALEKKVIVGGVDLLAKAEEQEKLLEESNMELEERRKRAEQLRKELEEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHQREIEGLLENIRQLSRELRLQMLIIDNFIPQDYQEMIENYVHWNEDIGEWQLKCVAYTGNNMRKQTPVPDKKERDPFEVDLSHVYLAYTEESLRQSLMKLERPRTSKGKARPKTGRRIQAWKNPVVILRNKKTEQCFLRGLQLSVLDSNKESP", "length": 720 }, "evidence": [ { "id": "A0A5G2QP73", "url": "https://omabrowser.org/oma/group/A0A5G2QP73/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0YXF9-1", "protein_name": "Kinesin-like protein", "gene_name": "KIF3A", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPINKPEKPDRPESCDNVKVVVRCRPLNEREKATGYKMAVNVDEMRGTITVHKTDSSNEPPKTFTFDTVFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPELRGIIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLLGKDQSQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGVDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPKDALLRQFQKEIEELKKKLEEGEEISGSETSSSEEEDEEDDGEIGEDGEKRKKRREGKKKVSPDKMVEMQAKIEEERKALETKLDMEEEERNKARAELEKREKDLLKAQQEHQSLLEKLSALEKKVIVGGVDLLAKAEEQEKLLEESNMELEERRRRAEQLRKELEEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHQREIEGLLENIRQLSRELRLQMLIIDNFIPQDYQEMIENYVHWNEDIGEWQLKCVAYTGNNMRKQTPVLDKKEKDPFEVDLSHVYLAYTEESLRQSLMKLERPRTSKGRSRPKTGRRKRSAKPGAVIDSLLQ", "length": 704 }, "evidence": [ { "id": "A0A5G2QP73", "url": "https://omabrowser.org/oma/group/A0A5G2QP73/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0AAA9SDE6-1", "protein_name": "Kinesin-like protein", "gene_name": "KIF3A", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPINKSEKPESCDNVKVVVRCRPLNEREKSMCYKQAVSVDEMRGTITVHKTDSSNEPPKTFTFDTVFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPELRGIIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLLGKDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGVDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPKDALLRQFQKEIEELKKKLEEGEEISGSDISGSEEEDDEEGEVGEDGEKRKKRRSKKKVSPDKMVEMQAKIDEERKALETKLDMEEEERNKARAELEKREKDLLKAQQEHQSLLEKLSALEKKVIVGGVDLLAKAEEQEKLLEESNMELEERRRRAEQLRRELEEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHQREIEGLLENIRQLSRELRLQMLIIDNFIPQDYQEMIENYVHWNEDIGEWQLKCVAYTGNNMRKQTPVPDKKEKDPFEVDLSHVYLAYTEESLRQSLMKLERPRTSKGKARPKTGRRVARIPSGASVNSEQALLPVPTRAAHWESSRDTRISPHIQNALGAPQNLHHE", "length": 735 }, "evidence": [ { "id": "A0A5G2QP73", "url": "https://omabrowser.org/oma/group/A0A5G2QP73/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E9QB71-1", "protein_name": "Kinesin-like protein", "gene_name": "kif3a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPSNKLDKPEKLEVSDNVKVVVRCRPLNEKEKIMGHKQSVTVDEIRGTITVNKLDISSEPPKTFTFDTVFGPDSKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPELRGIIPNSFAHVFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLLGKDQMQRLEVKERPDVGVYIKDLSGYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGVDGNQHVRMGKLHLVDLAGSERQGKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPKDALLRQFQKEIEELKKKLEEGEEISGSDGSGSDDMDEDDVGDGGERRRKRRGRKKVSPDKMVEMQAKIEEERKALEAKLDMEEEERNKARAELEKREKDLLKAQQEHHLLLEKLSALEKRVIVGGVDLLAKAEEQEKLLEESNNELEERRKRAEQLRRELEEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHHREIEGLLENIRQLSRELRLQMLIIDNFIPQEYQEMIENYVHWNEDIGEWQLKCVAYTGNNMRKQTPVSDKKEKDPFEVDLSHVYLAYTEESMRQSLMKLERPRTSKNGKSRPKTGRRKRSSKPEAVIESLLQ", "length": 701 }, "evidence": [ { "id": "A0A5G2QP73", "url": "https://omabrowser.org/oma/group/A0A5G2QP73/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "P28741-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "Kif3a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPINKSEKPESCDNVKVVVRCRPLNEREKSMCYRQAVSVDEMRGTITVHKTDSSNEPPKTFTFDTVFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPGLRGVIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLLGKDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGVDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPKDALLRQFQKEIEELKKKLEEGEEVSGSDISGSEEDDEEGELGEDGEKKKKRRDQAGKKKVSPDKMVEMQAKIDEERKALETKLDMEEEERNKARAELERREKDLLKAQQEHQSLLEKLSALEKKVIVGGVDLLAKAEEQEKLLEESNMELEERRRRAEQLRKELEEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHQREIEGLLENIRQLSRELRLQMLIIDNFIPQDYQEMIENYVHWNEDIGEWQLKCVAYTGNNMRKQTPVPDKKERDPFEVDLSHVYLAYTEESLRQSLMKLERPRTSKGKARPKMGRRKRSAKPETVIDSLLQ", "length": 701 }, "evidence": [ { "id": "A0A5G2QP73", "url": "https://omabrowser.org/oma/group/A0A5G2QP73/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9VRK9-1", "protein_name": "Kinesin-like protein", "gene_name": "Klp64D", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MPQEEANAGTTAQLDDEIENVRVVVRTRPMDKNELSAGALSAISVDKINRAITVMKPNATANEPPKTYYFDNVFDGGSNQMDLYVDTARPIVDKVLEGYNGTILAYGQTGTGKTYTMSGNPDSPQTKGIIPNAFAHIFGHIAKAKENQKFLVRVSYMEIYNEEVRDLLGKDVGKSLEVKERPDIGVFVKDLSGYVVHNADDLENIMRLGNKNRAVGATKMNQESSRSHAIFSITVERSELGEGDVQHVRMGKLQLVDLAGSERQSKTQASGQRLKEATKINLSLSVLGNVISALVDGKSTHIPYRNSKLTRLLQDSLGGNSKTVMCATISPADSNYMETISTLRYASRAKNIQNRMHINEEPKDALLRHFQEEIARLRKQLEEGDSLEEEPPSSEEEEDTADDELEAPLEIELESSTIQAVEKKPKKKREKTDAEKEELAKRKNEHQKEIEHAKTEQETLRNKLVSLEGKILVGGENLLEKAQTQELLLEQSIAELEQHEKSEEALKQTLQQKATERIDIEERYSTLQDASTGITKKIHRVMQMLMGVKSELADQQQEHQREKEGIYENIRSLSRELALCELVLNSYVPKEYQSMINQYTHWNEDIGEWQLKCVAYTGNNMRKHISAHKTSGKEPDFLDLSHVYLSYNTDGVSNPMRSKSARPRTSGVPRPTTARRY", "length": 677 }, "evidence": [ { "id": "A0A5G2QP73", "url": "https://omabrowser.org/oma/group/A0A5G2QP73/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPINKSEKPESCDNVKVVVRCRPLNEREKSMCYKQAVSVDEMRGTITVHKTDSSNEPPKTFTFDTVFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAIPELRGIIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLLGKDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGIDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPKDALLRQFQKEIEELKKKLEEGEEISGSDISGSEEDDDEEGEVGEDGEKRKKRRGKKKVSPDKMIEMQAKIDEERKALETKLDMEEEERNKARAELEKREKDLLKAQQEHQSLLEKLSALEKKVIVGGVDLLAKAEEQEKLLEESNMELEERRKRAEQLRRELEEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHQREIEGLLENIRQLSRELRLQMLIIDNFIPRDYQEMIENYVHWNEDIGEWQLKCVAYTGNNMRKQTPVPDKKEKDPFEVDLSHVYLAYTEESLRQSLMKLERPRTSKGKARPKTGRRKRSAKPETVIDSLLQ", "length": 699 }, "evidence": [ { "id": "A0A5G2QP73", "url": "https://omabrowser.org/oma/group/A0A5G2QP73/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73" } ], "pmid": "" }, { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73" } ], "pmid": "" }, { "name": "protein-containing complex binding", "id": "GO:0044877", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0044877", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73" } ], "pmid": "" }, { "name": "microtubule motor activity", "id": "GO:0003777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003777", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 8, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73" } ], "pmid": "" }, { "name": "microtubule", "id": "GO:0005874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005874", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73" } ], "pmid": "" }, { "name": "cilium", "id": "GO:0005929", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005929", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73" } ], "pmid": "" }, { "name": "centriole", "id": "GO:0005814", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005814", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73" } ], "pmid": "" }, { "name": "kinesin II complex", "id": "GO:0016939", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016939", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73" } ], "pmid": "" }, { "name": "kinesin complex", "id": "GO:0005871", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005871", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73" } ], "pmid": "" }, { "name": "axon cytoplasm", "id": "GO:1904115", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1904115", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "transport along microtubule", "id": "GO:0010970", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010970", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73" } ], "pmid": "" }, { "name": "cilium assembly", "id": "GO:0060271", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060271", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73" } ], "pmid": "" }, { "name": "anterograde axonal transport", "id": "GO:0008089", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008089", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 205, "end_pos": 207, "annotation": "n_glycosylation_sequon" }, { "start_pos": 274, "end_pos": 276, "annotation": "n_glycosylation_sequon" }, { "start_pos": 4, "end_pos": 6, "annotation": "n_glycosylation_sequon" }, { "start_pos": 78, "end_pos": 80, "annotation": "n_glycosylation_sequon" }, { "start_pos": 93, "end_pos": 95, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QP73", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP73" }, { "id": "PS50067", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50067" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Kinesin motor", "eco_id": "ECO_0000259", "start_pos": 14, "end_pos": 345, "start_aa": "Asn", "end_aa": "Ile", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 205, "end_pos": 207 }, { "start_pos": 274, "end_pos": 276 }, { "start_pos": 4, "end_pos": 6 }, { "start_pos": 78, "end_pos": 80 }, { "start_pos": 93, "end_pos": 95 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QL79-1", "uniprot_ac": "A0A5G2QL79", "uniprot_id": "A0A5G2QL79_PIG", "mass": { "chemical_mass": 100427.0, "monoisotopic_mass": 100427.0 }, "refseq": {}, "gene_names": [ { "name": "GRAMD1B", "type": "recommended", "evidence": [ { "id": "A0A5G2QL79", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL79" } ] } ], "protein_names": [ { "name": "GRAM domain containing 1B", "type": "synonym", "evidence": [ { "id": "A0A5G2QL79", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL79/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QL79", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL79" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GRAMD1B", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL79", "locus": { "chromosome": "9", "start_pos": 50505129, "end_pos": 50335062, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015144", "url": "https://www.ensembl.org/id/ENSSSCG00000015144" } ] } } ], "crossref": [ { "id": "A0A5G2QL79", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QL79", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000015144", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015144", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd13220", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13220", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100512979", "url": "https://www.ncbi.nlm.nih.gov/gene/100512979", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004182", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004182", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR031968", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031968", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051482", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051482", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100512979", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512979", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287BNV1", "url": "https://www.orthodb.org/?gene=A0A287BNV1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23319", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23319", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23319:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23319:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02893", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02893", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16016", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16016", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287AFB3", "url": "https://www.uniprot.org/uniprotkb/A0A287AFB3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AFB3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AFB3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BGH7", "url": "https://www.uniprot.org/uniprotkb/A0A287BGH7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BGH7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BGH7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BNV1", "url": "https://www.uniprot.org/uniprotkb/A0A287BNV1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BNV1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BNV1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A480JIC6", "url": "https://www.uniprot.org/uniprotkb/A0A480JIC6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A480JIC6-1", "url": "https://www.uniprot.org/uniprotkb/A0A480JIC6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QL79", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL79", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QL79-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL79-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S9P9", "url": "https://www.uniprot.org/uniprotkb/F1S9P9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S9P9-1", "url": "https://www.uniprot.org/uniprotkb/F1S9P9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L5B8", "url": "https://www.uniprot.org/uniprotkb/I3L5B8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L5B8-1", "url": "https://www.uniprot.org/uniprotkb/I3L5B8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKN9", "url": "https://www.uniprot.org/uniprotkb/I3LKN9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKN9-1", "url": "https://www.uniprot.org/uniprotkb/I3LKN9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPAANMMESLQPPALQVPEQRGAPEGSPVWSSSSTPTLRRRRFKMRRTKNVQEQSLEAGLSQDLPGVLAPGKEFLQLPSIEITPSSDEDTPWSNCSTPSASPRRKRFLLRKWLRVRERKECSESSSQQSSQQSSHDDDSSRFLSPRVREESTASNSNRSTPACSPILRKRSRSPTPQNPDGDTMVEKGSDHSSDKSPSTPEQGVQRSCSSQSGRSGGKNSKKSQSWYNVLSPTYKQRNEDFRKLFKQLPDSERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWETLLTVRLKDICSMTKEKTARLIPNAIQVCTDSEKHFFTSFGARDRTYMMMFRLWQNALLEKPLCPKELWHFVHQCYGNELGLTSDDEDYVPPDDDVNTMGYCEEIPVEENEVNDSSSKSSIETKPDASPQLPKKSITNSTLTSTGSSEAPVSFDGLPLEEEVLEGDGSLEKELAIDNIIGEKIEIIAPVTSPSLDFNDNEDIPTELSDSSDTHDEGEVQAFYEDLSGRQYVNEVFNFSVDKLYDLLFTDSPFQRDFMEQRRFSDIIFHPWKKEENGNQSRVILYTITLTNPLAPKTATVRETQTMYKASQESECYVIDAEVLTHDVPYHDYFYTINRYTLTRVARNKSRLRVSTELRYRKQPWGLVKTFIEKNFWSGLEDYFRHLESELTKTESTYLAEMHRQSPKEKASKPPTVRRRKRPHAHLRVPHLEEVMSPVTTPTDEDVGHRIKHVAGSTQTRHIPEDTPSGFHLQSVSKLLLVISCVLVLLVILNVMLFYKLWMLEYTTQTLTAWQGLRLQERLPQSQTEWAQLLESQQKYHDTELQKWREIIKSSVMLLDQVRCPPPTLPGSSGGGNPSQCFHPSQSPSFS", "length": 878, "header": "tr|A0A5G2QL79-1|A0A5G2QL79_PIG Isoform 1 of GRAM domain containing 1B OS=Sus scrofa OX=9823 GN=GRAMD1B PE=1 SV=1 CANONICAL=A0A5G2QL79-1" }, "isoforms": [ { "isoform_ac": "A0A287AFB3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AFB3/entry", "sequence": { "sequence": "MPAANMMESLQPPALQVPEQRGAPEGSPVWSSSSTPTLRRRRFKMRRTKNVQEQSLEAGLSQDLPGVLAPGKEFLQLPSIEITPSSDEDTPWSNCSTPSASPRRKRFLLRKWLRVRERKECSESSSQQSSQQSSHDDDSSRFLSPRVREESTASNSNRSTPACSPILRKRSRSPTPQNPDGDTMVEKGSDHSSDKSPSTPEQGVQRSCSSQSGRSGGKNSKVLSPTYKQRNEDFRKLFKQLPDSERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWETLLTVRLKDICSMTKEKTARLIPNAIQVCTDSEKHFFTSFGARDRTYMMMFRLWQNALLEKPLCPKELWHFVHQCYGNELGLTSDDEDYVPPDDDVNTMGYCEEIPVEENEVNDSSSKSSIETKPDASPQLPKKSITNSTLTSTGSSEAPVSFDGLPLEEEVLEGDGSLEKELAIDNIIGEKIEIIAPVTSPSLDFNDNEDIPTELSDSSDTHDEGEVQAFYEDLSGRQYVNEVFNFSVDKLYDLLFTDSPFQRDFMEQRRFSDIIFHPWKKEENGNQSRVILYTITLTNPLAPKTATVRETQTMYKASQESECYVIDAEVLTHDVPYHDYFYTINRYTLTRVARNKSRLRVSTELRYRKQPWGLVKTFIEKNFWSGLEDYFRHLESELTKTESTYLAEMHRQSPKEKASKPPTVRRRKRPHAHLRVPHLEEVMSPVTTPTDEDVGHRIKHVAGSTQTRHIPEDTPSGFHLQSVSKLLLVISCVLVLLVILNVMLFYKLWMLEYTTQTLTAWQGLRLQERLPQSQTEWAQLLESQQKYHDTELQKWREIIKSSVMLLDQVRCPPPTLPGSSGGGNPSQCFHPSQSPSFS", "length": 871, "header": "tr|A0A287AFB3-1|A0A5G2QL79_PIG Computationally mapped isoform of GRAM domain containing 1B OS=Sus scrofa OX=9823 GN=GRAMD1B PE=1 SV=2 CANONICAL=A0A5G2QL79-1" }, "locus": { "chromosome": "9", "start_pos": 50500702, "end_pos": 50335261, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059707.3", "url": "https://www.ensembl.org/id/ENSSSCT00000059707.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000042525.2", "url": "https://www.ensembl.org/id/ENSSSCP00000042525.2" } ] } }, { "isoform_ac": "A0A287BGH7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BGH7/entry", "sequence": { "sequence": "MLGTQLKGRKGGQQGSPKTLCQAGKGRSSAFSPGKPICLHPVRTVGKYRSLRSRVPVGGGAVGSKMESLTESGVLWSLLLEQDSQPLQWYLRKLADVPAGTELCYWPGSEEIPAVLSPTYKQRNEDFRKLFKQLPDSERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWETLLTVRLKDICSMTKEKTARLIPNAIQVCTDSEKHFFTSFGARDRTYMMMFRLWQNALLEKPLCPKELWHFVHQCYGNELGLTSDDEDYVPPDDDVNTMGYCEEIPVEENEVNDSSSKSSIETKPDASPQLPKKSITNSTLTSTGSSEAPVSFDGLPLEEEVLEGDGSLEKELAIDNIIGEKIEIIAPVTSPSLDFNDNEDIPTELSDSSDTHDEGEVQAFYEDLSGRQYVNEVFNFSVDKLYDLLFTDSPFQRDFMEQRRFSDIIFHPWKKEENGNQSRVILYTITLTNPLAPKTATVRETQTMYKASQESECYVIDAEVLTHDVPYHDYFYTINRYTLTRVARNKSRLRVSTELRYRKQPWGLVKTFIEKNFWSGLEDYFRHLESELTKTESTYLAEMHRQSPKEKASKPPTVRRRKRPHAHLRVPHLEEVMSPVTTPTDEDVGHRIKHVAGSTQTRHIPEDTPSGFHLQSVSKLLLVISCVLVLLVILNVMLFYKLWMLEYTTQTLTAWQGLRLQERLPQSQTEWAQLLESQQKYHDTELQKWREIIKSSVMLLDQMKDSLINLQNGIRTVICVSFLFCRL", "length": 759, "header": "tr|A0A287BGH7-1|A0A5G2QL79_PIG Computationally mapped isoform of GRAM domain containing 1B OS=Sus scrofa OX=9823 GN=GRAMD1B PE=1 SV=1 CANONICAL=A0A5G2QL79-1" }, "locus": { "chromosome": "9", "start_pos": 50505126, "end_pos": 50475189, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042722.3", "url": "https://www.ensembl.org/id/ENSSSCT00000042722.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055449.1", "url": "https://www.ensembl.org/id/ENSSSCP00000055449.1" } ] } }, { "isoform_ac": "A0A287BNV1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BNV1/entry", "sequence": { "sequence": "MLGTQLKGRKGGQQGSPKTLCQAGKGRSSAFSPGKPICLHPVRTVGKYRSLRSRVPVGGGAVGSKMESLTESGVLWSLLLEQDSQPLQWYLRKLADVPAGTELCYWPGSEEIPAVLSPTYKQRNEDFRKLFKQLPDSERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWETLLTVRLKDICSMTKEKTARLIPNAIQVCTDSEKHFFTSFGARDRTYMMMFRLWQNALLEKPLCPKELWHFVHQCYGNELGLTSDDEDYVPPDDDVNTMGYCEEIPVEENEVNDSSSKSSIETKPDASPQLPKKSITNSTLTSTGSSEAPVSFDGLPLEEEVLEGDGSLEKELAIDNIIGEKIEIIAPVTSPSLDFNDNEDIPTELSDSSDTHDEGEVQAFYEDLSGRQYVNEVFNFSVDKLYDLLFTDSPFQRDFMEQRRFSDIIFHPWKKEENGNQSRVILYTITLTNPLAPKTATVRETQTMYKASQESECYVIDAEVLTHDVPYHDYFYTINRYTLTRVARNKSRLRVSTELRYRKQPWGLVKTFIEKNFWSGLEDYFRHLESELTKTESTYLAEMHRQSPKEKASKPPTVRRRKRPHAHLRVPHLEEVMSPVTTPTDEDVGHRIKHVAGSTQTRHIPEDTPSGFHLQSVSKLLLVISCVLVLLVILNVMLFYKLWMLEYTTQTLTAWQGLRLQERLPQSQTEWAQLLESQQKYHDTELQKWREIIKSSVMLLDQMKDSLINLQNGIRSRDYTSESEEKRNRYH", "length": 763, "header": "tr|A0A287BNV1-1|A0A5G2QL79_PIG Computationally mapped isoform of GRAM domain containing 1B OS=Sus scrofa OX=9823 GN=GRAMD1B PE=1 SV=2 CANONICAL=A0A5G2QL79-1" }, "locus": { "chromosome": "9", "start_pos": 50502163, "end_pos": 50475189, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040189.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040189.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057854.2", "url": "https://www.ensembl.org/id/ENSSSCP00000057854.2" } ] } }, { "isoform_ac": "A0A480JIC6-1", "url": "https://www.uniprot.org/uniprotkb/A0A480JIC6/entry", "sequence": { "sequence": "MPAANMMESLQPPALQVPEQRGAPEGSPVWSSSSTPTLRRRRFKMRRTKNVQEQSLEAGLSQDLPGVLAPGKEFLQLPSIEITPSSDEDTPWSNCSTPSASPRRKRFLLRKWLRVRERKECSESSSQQSSQQSSHDDDSSRFLSPRVREESTASNSNRSTPACSPILRKRSRSPTPQNPDGDTMVEKGSDHSSDKSPSTPEQGVQRSCSSQSGRSGGKNSKKSQSWYNVLSPTYKQRNEDFRKLFKQLPDSERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWETLLTVRLKDICSMTKEKTARLIPNAIQVCTDSEKHFFTSFGARDRTYMMMFRLWQNALLEKPLCPKELWHFVHQCYGNELGLTSDDEDYVPPDDDVNTMGYCEEIPVEENEVNDSSSKSSIETKPDASPQLPKKSITNSTLTSTGSSEAPVSFDGLPLEEEVLEGDGSLEKELAIDNIIGEKIEIIAPVTSPSLDFNDNEDIPTELSDSSDTHDEGEVQAFYEDLSGRQYVNEVFNFSVDKLYDLLFTDSPFQRDFMEQRRFSDIIFHPWKKEENGNQSRVILYTITLTNPLAPKTATVRETQTMYKASQESECYVIDAEVLTHDVPYHDYFYTINRYTLTRVARNKSRLRVSTELRYRKQPWGLVKTFIEKNFWSGLEDYFRHLESELTKTESTYLAEMHRQSPKEKASKPPTVRRRKRPHAHLRVPHLEEVMSPVTTPTDEDVGHRIKHVAGSTQTRHIPEDTPSGFHLQSVSKLLLVISCVLVLLVILNVMLFYKLWMLEYTTQTLTAWQGLRLQERLPQSQTEWAQLLESQQKYHDTELQKWREIIKSSVMLLDQMKDSLINLQNGIRSRDYTSESEEKRNRYH", "length": 877, "header": "tr|A0A480JIC6-1|A0A5G2QL79_PIG Computationally mapped isoform of GRAM domain containing 1B OS=Sus scrofa OX=9823 GN=GRAMD1B PE=1 SV=1 CANONICAL=A0A5G2QL79-1" }, "locus": { "chromosome": "9", "start_pos": 50502163, "end_pos": 50335261, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037956.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037956.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034863.3", "url": "https://www.ensembl.org/id/ENSSSCP00000034863.3" } ] } }, { "isoform_ac": "A0A5G2QL79-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL79/entry", "sequence": { "sequence": "MPAANMMESLQPPALQVPEQRGAPEGSPVWSSSSTPTLRRRRFKMRRTKNVQEQSLEAGLSQDLPGVLAPGKEFLQLPSIEITPSSDEDTPWSNCSTPSASPRRKRFLLRKWLRVRERKECSESSSQQSSQQSSHDDDSSRFLSPRVREESTASNSNRSTPACSPILRKRSRSPTPQNPDGDTMVEKGSDHSSDKSPSTPEQGVQRSCSSQSGRSGGKNSKKSQSWYNVLSPTYKQRNEDFRKLFKQLPDSERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWETLLTVRLKDICSMTKEKTARLIPNAIQVCTDSEKHFFTSFGARDRTYMMMFRLWQNALLEKPLCPKELWHFVHQCYGNELGLTSDDEDYVPPDDDVNTMGYCEEIPVEENEVNDSSSKSSIETKPDASPQLPKKSITNSTLTSTGSSEAPVSFDGLPLEEEVLEGDGSLEKELAIDNIIGEKIEIIAPVTSPSLDFNDNEDIPTELSDSSDTHDEGEVQAFYEDLSGRQYVNEVFNFSVDKLYDLLFTDSPFQRDFMEQRRFSDIIFHPWKKEENGNQSRVILYTITLTNPLAPKTATVRETQTMYKASQESECYVIDAEVLTHDVPYHDYFYTINRYTLTRVARNKSRLRVSTELRYRKQPWGLVKTFIEKNFWSGLEDYFRHLESELTKTESTYLAEMHRQSPKEKASKPPTVRRRKRPHAHLRVPHLEEVMSPVTTPTDEDVGHRIKHVAGSTQTRHIPEDTPSGFHLQSVSKLLLVISCVLVLLVILNVMLFYKLWMLEYTTQTLTAWQGLRLQERLPQSQTEWAQLLESQQKYHDTELQKWREIIKSSVMLLDQVRCPPPTLPGSSGGGNPSQCFHPSQSPSFS", "length": 878, "header": "tr|A0A5G2QL79-1|A0A5G2QL79_PIG Isoform 1 of GRAM domain containing 1B OS=Sus scrofa OX=9823 GN=GRAMD1B PE=1 SV=1 CANONICAL=A0A5G2QL79-1" }, "locus": { "chromosome": "9", "start_pos": 50500702, "end_pos": 50335261, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078660.2", "url": "https://www.ensembl.org/id/ENSSSCT00000078660.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065575.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065575.1" } ] } }, { "isoform_ac": "F1S9P9-1", "url": "https://www.uniprot.org/uniprotkb/F1S9P9/entry", "sequence": { "sequence": "MKGFKLSCTASNSNRSTPACSPILRKRSRSPTPQNPDGDTMVEKGSDHSSDKSPSTPEQGVQRSCSSQSGRSGGKNSKSHKRLSKKSQSWYNVLSPTYKQRNEDFRKLFKQLPDSERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWETLLTVRLKDICSMTKEKTARLIPNAIQVCTDSEKHFFTSFGARDRTYMMMFRLWQNALLEKPLCPKELWHFVHQCYGNELGLTSDDEDYVPPDDDVNTMGYCEEIPVEENEVNDSSSKSSIETKPDASPQLPKKSITNSTLTSTGSSEAPVSFDGLPLEEEVLEGDGSLEKELAIDNIIGEKIEIIAPVTSPSLDFNDNEDIPTELSDSSDTHDEGEVQAFYEDLSGRQYVNEVFNFSVDKLYDLLFTDSPFQRDFMEQRRFSDIIFHPWKKEENGNQSRVILYTITLTNPLAPKTATVRETQTMYKASQESECYVIDAEVLTHDVPYHDYFYTINRYTLTRVARNKSRLRVSTELRYRKQPWGLVKTFIEKNFWSGLEDYFRHLESELTKTESTYLAEMHRQSPKEKASKPPTVRRRKRPHAHLRVPHLEEVMSPVTTPTDEDVGHRIKHVAGSTQTRHIPEDTPSGFHLQSVSKLLLVISCVICFSLVLLVILNVMLFYKLWMLEYTTQTLTAWQGLRLQERLPQSQTEWAQLLESQQKYHDTELQKWREIIKSSVMLLDQMKDSLINLQNGIRSRDYTSESEEKRNRYH", "length": 745, "header": "tr|F1S9P9-1|F1S9P9_PIG Computationally mapped isoform of GRAM domain containing 1B OS=Sus scrofa OX=9823 GN=GRAMD1B PE=1 SV=4 CANONICAL=A0A5G2QL79-1" }, "locus": { "chromosome": "9", "start_pos": 50502163, "end_pos": 50413322, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016510.5", "url": "https://www.ensembl.org/id/ENSSSCT00000016510.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016067.4", "url": "https://www.ensembl.org/id/ENSSSCP00000016067.4" } ] } }, { "isoform_ac": "I3L5B8-1", "url": "https://www.uniprot.org/uniprotkb/I3L5B8/entry", "sequence": { "sequence": "MLGTQLKGRKGGQQGSPKTLCQAGKGRSSAFSPGKPICLHPVRTVGKYRSLRSRVPVGGGAVGSKMESLTESGVLWSLLLEQDSQPLQWYLRKLADVPAGTELCYWPGSEEIPAVLSPTYKQRNEDFRKLFKQLPDSERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWETLLTVRLKDICSMTKEKTARLIPNAIQVCTDSEKHFFTSFGARDRTYMMMFRLWQNALLEKPLCPKELWHFVHQCYGNELGLTSDDEDYVPPDDDVNTMGYCEEIPVEENEVNDSSSKSSIETKPDASPQLPKKSITNSTLTSTGSSEAPVSFDGLPLEEEVLEGDGSLEKELAIDNIIGEKIEIIAPVTSPSLDFNDNEDIPTELSDSSDTHDEGEVQAFYEDLSGRQYVNEVFNFSVDKLYDLLFTDSPFQRDFMEQRRFSDIIFHPWKKEENGNQSRVILYTITLTNPLAPKTATVRETQTMYKASQESECYVIDAEVLTHDVPYHDYFYTINRYTLTRVARNKSRLRVSTELRYRKQPWGLVKTFIEKNFWSGLEDYFRHLESELTKTESTYLAEMHRQSPKEKASKPPTVRRRKRPHAHLRVPHLEEVMSPVTTPTDEDVGHRIKHVAGSTQTRHIPEDTPSGFHLQSVSKLLLVISCVLVLLVILNVMLFYKLWMLEYTTQTLTAWQGLRLQERLPQSQTEWAQLLESQQKYHDTELQKWREIIKSSVMLLDQVRYSMIQVQLGTYCFLVGTWRV", "length": 756, "header": "tr|I3L5B8-1|I3L5B8_PIG Computationally mapped isoform of GRAM domain containing 1B OS=Sus scrofa OX=9823 GN=GRAMD1B PE=1 SV=3 CANONICAL=A0A5G2QL79-1" }, "locus": { "chromosome": "9", "start_pos": 50501494, "end_pos": 50475189, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032190.4", "url": "https://www.ensembl.org/id/ENSSSCT00000032190.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019217.3", "url": "https://www.ensembl.org/id/ENSSSCP00000019217.3" } ] } }, { "isoform_ac": "I3LKN9-1", "url": "https://www.uniprot.org/uniprotkb/I3LKN9/entry", "sequence": { "sequence": "MLLQGDTASNSNRSTPACSPILRKRSRSPTPQNPDGDTMVEKGSDHSSDKSPSTPEQGVQRSCSSQSGRSGGKNSKKSQSWYNVLSPTYKQRNEDFRKLFKQLPDSERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWETLLTVRLKDICSMTKEKTARLIPNAIQVCTDSEKHFFTSFGARDRTYMMMFRLWQNALLEKPLCPKELWHFVHQCYGNELGLTSDDEDYVPPDDDVNTMGYCEEIPVEENEVNDSSSKSSIETKPDASPQLPKKSITNSTLTSTGSSEAPVSFDGLPLEEEVLEGDGSLEKELAIDNIIGEKIEIIAPVTSPSLDFNDNEDIPTELSDSSDTHDEGEVQAFYEDLSGRQYVNEVFNFSVDKLYDLLFTDSPFQRDFMEQRRFSDIIFHPWKKEENGNQSRVILYTITLTNPLAPKTATVRETQTMYKASQESECYVIDAEVLTHDVPYHDYFYTINRYTLTRVARNKSRLRVSTELRYRKQPWGLVKTFIEKNFWSGLEDYFRHLESELTKTESTYLAEMHRQSPKEKASKPPTVRRRKRPHAHLRVPHLEEVMSPVTTPTDEDVGHRIKHVAGSTQTRHIPEDTPSGFHLQSVSKLLLVISCVLVLLVILNVMLFYKLWMLEYTTQTLTAWQGLRLQERLPQSQTEWAQLLESQQKYHDTELQKWREIIKSSVMLLDQVRCPPPTLPGSSGGGNPSQCFHPSQSPSFS", "length": 733, "header": "tr|I3LKN9-1|A0A5G2QL79_PIG Computationally mapped isoform of GRAM domain containing 1B OS=Sus scrofa OX=9823 GN=GRAMD1B PE=1 SV=3 CANONICAL=A0A5G2QL79-1" }, "locus": { "chromosome": "9", "start_pos": 50500702, "end_pos": 50397151, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027064.3", "url": "https://www.ensembl.org/id/ENSSSCT00000027064.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024654.3", "url": "https://www.ensembl.org/id/ENSSSCP00000024654.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 97, "start_aa": "Thr", "end_pos": 97, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr97", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LKN9", "url": "https://www.uniprot.org/uniprotkb/I3LKN9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100512979", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512979", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "organelle membrane contact site", "id": "GO:0044232", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0044232", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QL79", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL79" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QL79", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL79" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QL79", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL79" } ], "pmid": "" }, { "name": "endoplasmic reticulum-plasma membrane contact site", "id": "GO:0140268", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140268", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QL79", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL79" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "intracellular sterol transport", "id": "GO:0032366", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032366", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QL79", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL79" } ], "pmid": "" }, { "name": "cellular response to cholesterol", "id": "GO:0071397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071397", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QL79", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL79" } ], "pmid": "" }, { "name": "cholesterol homeostasis", "id": "GO:0042632", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042632", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QL79", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL79" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "cholesterol binding", "id": "GO:0015485", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015485", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QL79", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL79" } ], "pmid": "" }, { "name": "phosphatidylserine binding", "id": "GO:0001786", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001786", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QL79", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL79" } ], "pmid": "" }, { "name": "phosphatidic acid binding", "id": "GO:0070300", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070300", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QL79", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL79" } ], "pmid": "" }, { "name": "cholesterol transfer activity", "id": "GO:0120020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0120020", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QL79", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL79" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 157, "end_pos": 159, "annotation": "n_glycosylation_sequon" }, { "start_pos": 402, "end_pos": 404, "annotation": "n_glycosylation_sequon" }, { "start_pos": 427, "end_pos": 429, "annotation": "n_glycosylation_sequon" }, { "start_pos": 525, "end_pos": 527, "annotation": "n_glycosylation_sequon" }, { "start_pos": 566, "end_pos": 568, "annotation": "n_glycosylation_sequon" }, { "start_pos": 635, "end_pos": 637, "annotation": "n_glycosylation_sequon" }, { "start_pos": 94, "end_pos": 96, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QL79-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 878, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QL79-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QL79" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QL79", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL79" }, { "id": "PS51778", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51778" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "VASt", "eco_id": "ECO_0000259", "start_pos": 515, "end_pos": 686, "start_aa": "Ser", "end_aa": "Leu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 97 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 157, "end_pos": 159 }, { "start_pos": 402, "end_pos": 404 }, { "start_pos": 427, "end_pos": 429 }, { "start_pos": 525, "end_pos": 527 }, { "start_pos": 566, "end_pos": 568 }, { "start_pos": 635, "end_pos": 637 }, { "start_pos": 94, "end_pos": 96 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": 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"field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QFS9-1", "uniprot_ac": "A0A5G2QFS9", "uniprot_id": "A0A5G2QFS9_PIG", "mass": { "chemical_mass": 41811.0, "monoisotopic_mass": 41811.0 }, "refseq": {}, "gene_names": [ { "name": "TSFM", "type": "recommended", "evidence": [ { "id": "A0A5G2QFS9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFS9" } ] } ], "protein_names": [ { "name": "Elongation factor Ts, mitochondrial", "type": "recommended", "evidence": [ { "id": "A0A5G2QFS9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFS9/entry#names_and_taxonomy" } ] }, { "name": "EF-TsMt", "type": "synonym", "evidence": [ { "id": "A0A5G2QFS9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFS9/entry#names_and_taxonomy" } ] }, { "name": "EF-Ts", "type": "synonym", "evidence": [ { "id": "A0A5G2QFS9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFS9/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Participates in mitochondrial translation.", "evidence": [ { "database": "UniProtKB", "id": "A0A287AVW2", "url": "https://www.uniprot.org/uniprotkb/A0A287AVW2#function" }, { "database": "UniProtKB", "id": "ARBA00094424", "url": "https://www.uniprot.org/uniprotkb/ARBA00094424#function" }, { "database": "UniProtKB", "id": "A0A5G2QFS9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFS9#function" }, { "database": "UniProtKB", "id": "A0A5G2QMH0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMH0#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFS9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFS9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TSFM", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFS9", "locus": { "chromosome": "5", "start_pos": 23097915, "end_pos": 23072808, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000037767", "url": "https://www.ensembl.org/id/ENSSSCG00000037767" } ] } } ], "crossref": [ { "id": "A0A5G2QFS9", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QFS9", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000037767", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000037767", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd14275", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd14275", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001816", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001816", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009060", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009060", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014039", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014039", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018101", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018101", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036402", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036402", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "QEYMLDD", "url": "https://omabrowser.org/oma/group/QEYMLDD/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR11741", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11741", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11741:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11741:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00889", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00889", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25025", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25025", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287AVW2", "url": "https://www.uniprot.org/uniprotkb/A0A287AVW2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AVW2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AVW2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFS9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFS9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFS9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFS9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QMH0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMH0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QMH0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMH0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRPPASRWRHPRLARFCGEFWPHRHAVGSGPHRCAGQRQCTALRKMSLLWSLRLSLVARAASCPVRALGPSPVLPSSQAGPLLLQSPQPGHTFHAGPCLSSASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAESWLHKQAQKEGWSKAARLHGRKTKEGLIGLLQEGNTSVLVEVNCETDFVSRNLKFQQLVQQVALGTLLHCQSLKDPLSTYSKGFLNSSELSELPAGPEREGSLKDWLALAIGKLGENMTLKRAAWVKVPAGFYVGSYVHGTMQSPSLHNLVLGKYGALVICETSERKANLEDLGRRLGQHVVGMAPLSVGSLDDEPGGEAETRMLSQPYLLDPSITLGQYVQPQGVSVVDFVRFECGEGEELAEAE", "length": 383, "header": "tr|A0A5G2QFS9-1|A0A5G2QFS9_PIG Isoform 1 of Elongation factor Ts, mitochondrial OS=Sus scrofa OX=9823 GN=TSFM PE=1 SV=1 CANONICAL=A0A5G2QFS9-1" }, "isoforms": [ { "isoform_ac": "A0A287AVW2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AVW2/entry", "sequence": { "sequence": "MSLLWSLRLSLVARAASCPAGPLLLQSPQPGHTFHAGPCLSSASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAESWLHKQAQKEGWSKAARLHGRKTKEGLIGLLQEGNTSVLVEVNCETDFVSRNLKFQQLVQQVALGTLLHCQSLKDPLSTYSKGFLNSSELSELPAGPEREGSLKDWLALAIVVRPYHICMI", "length": 199, "header": "tr|A0A287AVW2-1|A0A5G2QFS9_PIG Computationally mapped isoform of Elongation factor Ts, mitochondrial OS=Sus scrofa OX=9823 GN=TSFM PE=1 SV=2 CANONICAL=A0A5G2QFS9-1" }, "locus": { "chromosome": "5", "start_pos": 23096911, "end_pos": 23073142, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047029.3", "url": "https://www.ensembl.org/id/ENSSSCT00000047029.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000048066.2", "url": "https://www.ensembl.org/id/ENSSSCP00000048066.2" } ] } }, { "isoform_ac": "A0A5G2QFS9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFS9/entry", "sequence": { "sequence": "MRPPASRWRHPRLARFCGEFWPHRHAVGSGPHRCAGQRQCTALRKMSLLWSLRLSLVARAASCPVRALGPSPVLPSSQAGPLLLQSPQPGHTFHAGPCLSSASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAESWLHKQAQKEGWSKAARLHGRKTKEGLIGLLQEGNTSVLVEVNCETDFVSRNLKFQQLVQQVALGTLLHCQSLKDPLSTYSKGFLNSSELSELPAGPEREGSLKDWLALAIGKLGENMTLKRAAWVKVPAGFYVGSYVHGTMQSPSLHNLVLGKYGALVICETSERKANLEDLGRRLGQHVVGMAPLSVGSLDDEPGGEAETRMLSQPYLLDPSITLGQYVQPQGVSVVDFVRFECGEGEELAEAE", "length": 383, "header": "tr|A0A5G2QFS9-1|A0A5G2QFS9_PIG Isoform 1 of Elongation factor Ts, mitochondrial OS=Sus scrofa OX=9823 GN=TSFM PE=1 SV=1 CANONICAL=A0A5G2QFS9-1" }, "locus": { "chromosome": "5", "start_pos": 23086833, "end_pos": 23073007, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000086159.2", "url": "https://www.ensembl.org/id/ENSSSCT00000086159.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060895.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060895.1" } ] } }, { "isoform_ac": "A0A5G2QMH0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMH0/entry", "sequence": { "sequence": "MSLLWSLRLSLVARAASCPAGPLLLQSPQPGHTFHAGPCLSSASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAESWLHKQAQKEGWSKAARLHGRKTKEGLIGLLQEGNTSVLVEVNCETDFVSRNLKFQQLVQQVALGTLLHCQSLKDPLSTYSKGNWEKT", "length": 166, "header": "tr|A0A5G2QMH0-1|A0A5G2QMH0_PIG Computationally mapped isoform of Elongation factor Ts, mitochondrial OS=Sus scrofa OX=9823 GN=TSFM PE=1 SV=1 CANONICAL=A0A5G2QFS9-1" }, "locus": { "chromosome": "5", "start_pos": 23086447, "end_pos": 23073142, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000085306.2", "url": "https://www.ensembl.org/id/ENSSSCT00000085306.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065237.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065237.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287AVW2", "url": "https://www.uniprot.org/uniprotkb/A0A287AVW2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "G3HW62-1", "protein_name": "Elongation factor Ts, mitochondrial", "gene_name": "Tsfm", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLLLRSLRFFPVLCTGRSAGSALLQPSQPWHTLHAGPTLSSSASSKELLMKLRRKTGYSFVNCKKALEACDGDLKQAEAWLHKQAQKEGWSKAAKLQGRKTKEGLIGLLQEGNTTVLVEVNCETDFVSRNLKFQQLVQQVALGTMSHCQSLNDQLSTYTKGFLNSSELSELAAGPNREGSLKDQLALAIGKLGENMILRRAAWVMVPSGFYVGSYVHGVTQSPSLHNLVLGKYGALVVCQTCEQSANLKDVGRRLGQHVVGMAPLSVGSLDDEPGGETETRMLSQPYLLDPSITLGQYVQPQGVSVVDFVRFECGEVEEEEAVEAK", "length": 326 }, "evidence": [ { "id": "A0A5G2QFS9", "url": "https://omabrowser.org/oma/group/A0A5G2QFS9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P43897-1", "protein_name": "Elongation factor Ts, mitochondrial", "gene_name": "TSFM", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSLLRSLRVFLVARTGSYPAGSLLRQSPQPRHTFYAGPRLSASASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKAAKLQGRKTKEGLIGLLQEGNTTVLVEVNCETDFVSRNLKFQLLVQQVALGTMMHCQTLKDQPSAYSKGFLNSSELSGLPAGPDREGSLKDQLALAIGKLGENMILKRAAWVKVPSGFYVGSYVHGAMQSPSLHKLVLGKYGALVICETSEQKTNLEDVGRRLGQHVVGMAPLSVGSLDDEPGGEAETKMLSQPYLLDPSITLGQYVQPQGVSVVDFVRFECGEGEEAAETE", "length": 325 }, "evidence": [ { "id": "A0A5G2QFS9", "url": "https://omabrowser.org/oma/group/A0A5G2QFS9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q54LV3-1", "protein_name": "Elongation factor Ts, mitochondrial", "gene_name": "tsfm", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIRSLNFALRNCNKNILINSNKITINNGLLLKKNNFCTQSTSEVKVPTELVVQLRKKTQSPVQECKKALQASNNDMDGAIKWLLEKGKATAEKLKSRVSAEGIISVLVDSGSGKAVILEMNSETDFVSRGDIFRNLARDISKATLSNPISGGKLAENGILELDPTQVENIYPIKINITNEDGVAEEMTIKDSIVRIVSKLRENIVIRRASFIQPLNNNNNNSKSYISSYAHDSTSEKKDVGRLGSIVQFEYQGDCNNMNSLKEFANQLAIHIVSNSPSVVTVNDIPSSVLEECKNNNKNPESLYDDMVLYEQSYMYSPDHSVKQYLEILSEKLGIKNLSVKTFRRYAIGETAERV", "length": 355 }, "evidence": [ { "id": "A0A5G2QFS9", "url": "https://omabrowser.org/oma/group/A0A5G2QFS9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q5XF75-1", "protein_name": "Elongation factor Ts, mitochondrial", "gene_name": "EFTS", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAFARAVRRPIGVFYYSVSSRFSSGNEYSTVASKFETLSQYKSSVPSGYTSLVRGFGNFIRSFSSEAPPAVSDQMSLIKQLRERTSAPIKDVKASLVECNWDLEAAQKDLRKRGKVLASKKSSRTAAEGMLAVAQNEGKVAVIELNCETDFVARNEIFQYLALAMAKHALLVESSSQQVSGVFPFGPELFEEFKLNLDHPKVNGETTVSNAVTEVAAIMGENVKFRRGFLMSKSSAGVLSAYLHTSPQPGLGRIAGIVSLEVEGENTQLEAIQRVGSELAMHVVAAKPLFLSKDLVSSEAMANEREILKSQAESTGKNQMAIEKIVEGRLRKYFEEVALMEQKFIVNDAINIKTLVDNLSKEVGSPVKVTDFLRVEVGEGIERLEASDEPVAQTA", "length": 395 }, "evidence": [ { "id": "A0A5G2QFS9", "url": "https://omabrowser.org/oma/group/A0A5G2QFS9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CZR8-1", "protein_name": "Elongation factor Ts, mitochondrial", "gene_name": "Tsfm", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSLLRSLRFFPVACTGRSARAVLLQPSQPWLTFHAGPSLSSAASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEDWLHKQAQKEGWSKAAKLHGRKTKEGLIGLLQEGNTAVLVEVNCETDFVSRNLKFQQLVQQVALGTMAHCQNLTDRLSTYSKGFLNSSELSELAAGPDREGSLKDQLALAIGKLGENMILKRAAWVKVPSGFYVGSYVHGVTQSPSLQNLVLGKYGALVICETPEQIANLEEVGRRLGQHVVGMAPLSVGSLDDEPGGETETRMLPQPYLLDPSITLGQYVQPQGVTVVDFVRFECGEDEQVAEAE", "length": 324 }, "evidence": [ { "id": "A0A5G2QFS9", "url": "https://omabrowser.org/oma/group/A0A5G2QFS9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9QYU2-1", "protein_name": "Elongation factor Ts, mitochondrial", "gene_name": "Tsfm", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLLRSLRFFPVACTGRSARAVLLQPSQPWHTLHAGPSLSSSASSKELLMKLRRTTGYSFVNCKKALETCGGDLKQAEAWLHKQAQKEGWSKAAKLHGRKTKEGLIGLLQEENTAVLVEVNCETDFVSRNVKFQQLVQQVALGTMAHCQNLTDQLSTYSKGFLNSSELSELAAGPDGEGSLKDQLALAIGTLGENMSLKRAAWVKVPSGFYVGSYVHGEMQSPSLQNLVLGKYGALVICQTPEQITNLEEVGRRLGQHVVGMAPLSVGSLDDEPGGETETRMLPQPYLLDPSITLGQYVQPQGVTVVDFVRFECGEGEQVAEAE", "length": 324 }, "evidence": [ { "id": "A0A5G2QFS9", "url": "https://omabrowser.org/oma/group/A0A5G2QFS9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9VJC7-1", "protein_name": "Elongation factor Ts, mitochondrial", "gene_name": "mEFTs", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MLLQRFFTRALHSTRQLYAGSGGSGGLEKSALAALRKKTGYTFANCKKALEKHNNDVGLAEKWLHEQAQTLGWSKATKVADRATAHGLIGVLIRGNRGAMVELNCETDFVARNDTFKRFVDHVACMCLQYTDLTDFDGDLWKLGFDADALRNLRTEEGRTLGDHLALLIGAIGENATIRRALCFKANNDLKLVGYAHPAPTNVGTTEGITQVGKYGAIVAYRSTHPLLDFEFHKSICQQIVGMKPTKIGEYDKDKPAENKDDETCLIHQEYLLDADKTVGEALQEHNCEIVDYHRFECGEHTERSLEAIIRSQHQSSN", "length": 318 }, "evidence": [ { "id": "A0A5G2QFS9", "url": "https://omabrowser.org/oma/group/A0A5G2QFS9/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFS9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFS9" } ], "pmid": "" }, { "name": "intracellular organelle lumen", "id": "GO:0070013", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070013", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFS9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFS9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "translation elongation factor activity", "id": "GO:0003746", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003746", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFS9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFS9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "mitochondrial translational elongation", "id": "GO:0070125", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070125", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFS9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFS9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 172, "end_pos": 174, "annotation": "n_glycosylation_sequon" }, { "start_pos": 223, "end_pos": 225, "annotation": "n_glycosylation_sequon" }, { "start_pos": 254, "end_pos": 256, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QFS9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 383, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QFS9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QFS9" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QFS9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFS9" }, { "id": "PF00889", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00889" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Translation elongation factor EFTs/EF1B dimerisation", "eco_id": "ECO_0000259", "start_pos": 182, "end_pos": 326, "start_aa": "Glu", "end_aa": "Val", 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[ "Protein Classification" ] }, { "id": "PTHR13454:SF11", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13454:SF11", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF09329", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09329", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF09332", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09332", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22379", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22379", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24863", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24863", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-176187", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-176187", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-68962", 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GN=MCM10 PE=3 SV=3 CANONICAL=A0A5G2QMU6-1" }, "locus": { "chromosome": "10", "start_pos": 48521711, "end_pos": 48484883, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062154.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062154.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049058.3", "url": "https://www.ensembl.org/id/ENSSSCP00000049058.3" } ] } }, { "isoform_ac": "A0A5G2QMU6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMU6/entry", "sequence": { "sequence": "MDGEEDDLSLLTALLEENESALNCNSEVSQPLTQEDGEPDEFDELFDADGDGESYTEETSEGEVEKAEDQKENLDALFGDMGDLTDEEEVPTLQSAKNGVLPAPAPRQGKSNQELQDELKKLQEQMKSLQEQLKLATIKQPASPARLHKSPVDKTSRPPLKEKKVQRIQESACFSADLDVPTLPKPKRVARTPKVSPAEPKSPSSRMTSIPSQPLRTTPGNTPGGVTRDQSAGTPRSSGETAPTVSVETFSGLRLRKPRVSSTEMNKKMTGRRLIRLSQLKEKMASEKLEEIDWVTFGVILKKVTPQSSNSGKTFSIWRLNDLRDLTRYVSLFLFGEVHKELWKTEQGTVIGLLNANPMKPKDGSEEVCLSIDHPQKVLIMGEALDLGTCKAKKKNGEPCTQTVNLNDCEYCQYHIQAQYKRLSARRADLQSTFSGGRIPKKFARKGISLKERLCQDGFYYGGVSSASYAASIAAAVAPKKKIQTTLTNLVVKGTDLILQETQQKLGIPQKSLSCSEEFRELMDLPTFGARNLKHHLAKVKTSGILGSPKPAFQSISASALLKQQKQRMLEMRKKKSEEIQKRFLQSSSEAESPAVPSSSREPLSCSPPTGAKLPKMNGTPAIQTPKLGRGISEGDDVLLFDKSPPPRPKLSALAEAKKLAAITKLRAKGQILTKTDPNSIQKKLKKPQDVLEVKERVEKNSTFSLQAEDELEPARKKRREQLAYLESEEFQTLLKAKSRHTDVLKEAEAELQEQYFEPLVKKEQMEEKMRNIREVKCRVVTCKTCAYTHFKPLETCVSEQHDYHWHDGVKRFFKCPCGNRSISLDRLPQKHCSNCGLFKWERDGMLKEKTGPKIGGETLLPRGEEHAKFLNSLK", "length": 875, "header": "tr|A0A5G2QMU6-1|A0A5G2QMU6_PIG Isoform 1 of Protein MCM10 homolog OS=Sus scrofa OX=9823 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"length": 1112, "header": "tr|A0A5G2QGP0-1|A0A5G2QGP0_PIG Isoform 1 of Thrombospondin-2 OS=Sus scrofa OX=9823 GN=THBS2 PE=3 SV=2 CANONICAL=A0A5G2QGP0-1" }, "locus": { "chromosome": "1", "start_pos": 880559, "end_pos": 857909, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084254.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084254.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061166.2", "url": "https://www.ensembl.org/id/ENSSSCP00000061166.2" } ] } }, { "isoform_ac": "F1SBZ9-1", "url": "https://www.uniprot.org/uniprotkb/F1SBZ9/entry", "sequence": { "sequence": 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"length": 1170, "header": "tr|F1SBZ9-1|F1SBZ9_PIG Computationally mapped isoform of Thrombospondin-2 OS=Sus scrofa OX=9823 GN=THBS2 PE=3 SV=5 CANONICAL=A0A5G2QGP0-1" }, "locus": { "chromosome": "1", "start_pos": 880559, "end_pos": 857909, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004436.5", "url": "https://www.ensembl.org/id/ENSSSCT00000004436.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004335.5", "url": "https://www.ensembl.org/id/ENSSSCP00000004335.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2H4", "url": "https://www.uniprot.org/uniprotkb/A0A287B2H4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-186797", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-186797", "resource": "Reactome", "description": "Signaling by PDGF" }, { "id": "R-SSC-5173214", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5173214", "resource": "Reactome", "description": "O-glycosylation of TSR domain-containing proteins" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": 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"total": 2, "go_terms": [ { "name": "cell adhesion", "id": "GO:0007155", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007155", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGP0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGP0" } ], "pmid": "" }, { "name": "negative regulation of angiogenesis", "id": "GO:0016525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016525", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGP0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGP0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "heparin binding", "id": "GO:0008201", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008201", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGP0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGP0" } ], "pmid": "" }, { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGP0", "url": 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"ENSSSCG00000009951", "url": "https://www.ensembl.org/id/ENSSSCG00000009951" } ] } } ], "crossref": [ { "id": "A0A287B2S2", "url": "https://alphafold.ebi.ac.uk/entry/A0A287B2S2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000009951", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000009951", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd15784", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd15784", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd17703", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd17703", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100152606", "url": "https://www.ncbi.nlm.nih.gov/gene/100152606", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000195", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000195", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": 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"categories": [ "Enzyme and Pathway" ] }, { "id": "LWPKSMR", "url": "https://omabrowser.org/oma/group/LWPKSMR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287B2S2", "url": "https://www.orthodb.org/?gene=A0A287B2S2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A287BIP3", "url": "https://www.orthodb.org/?gene=A0A287BIP3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR22957", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22957", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22957:SF187", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22957:SF187", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00566", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00566", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02759", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02759", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12068", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12068", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005670818", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005670818", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B2S2", "url": "https://www.uniprot.org/uniprotkb/A0A287B2S2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B2S2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B2S2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BIP3", "url": "https://www.uniprot.org/uniprotkb/A0A287BIP3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BIP3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BIP3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RGA2", "url": 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"length": 1094, "header": "tr|A0A287B2S2-1|A0A287B2S2_PIG Isoform 1 of Small G protein signaling modulator 1 OS=Sus scrofa OX=9823 GN=SGSM1 PE=3 SV=1 CANONICAL=A0A287B2S2-1" }, "isoforms": [ { "isoform_ac": "A0A287B2S2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B2S2/entry", "sequence": { "sequence": 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"length": 1094, "header": "tr|A0A287B2S2-1|A0A287B2S2_PIG Isoform 1 of Small G protein signaling modulator 1 OS=Sus scrofa OX=9823 GN=SGSM1 PE=3 SV=1 CANONICAL=A0A287B2S2-1" }, "locus": { "chromosome": "14", "start_pos": 42972448, "end_pos": 42882324, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052249.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052249.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050402.1", "url": "https://www.ensembl.org/id/ENSSSCP00000050402.1" } ] } }, { "isoform_ac": "A0A287BIP3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BIP3/entry", "sequence": { "sequence": "MASGPAEAETRQRLLRTVKKEVKQIMEEAVTRKFVHEDSSHIISFCAAVEACVLHGLRRRAAGFLRSNKIAALFMKVGKSFPPAEELSRKVQDLEQLIESTRNQIQGLQENVRKLPKLPNLSPLAIKHLWIRTALFEKVLDKIVHYLVENSSKYYEKEALLMDPVDGPILASLLVGPCALEYTKMKTSDHFWTDPSADELVQRHRIHSSHLRQDSPTKRPALCIQKRHSSSSMDDRPSLSARDYVESLHQNSRATLLYGKNNVLVQPRDDMEAVPGYLSLHQTADVMTLKWTPNQLMNGSMGDLDYEKSVYWDYAMTIRLEEIVYLHCHQQVDSGGTVVLVSQDGIQRPPFRFPKGGHLLQFLSCLENGLLPHGQLDPPLWSQRGKGKVFPKLRKRSPQGSSESTSSDKEDDEATDYVFRIIYPGMQSEFVASDPLGSTSPVSVGTAWMVVPVGRSVLVVARGSRWAQTRWDTTLPTSILKQQPPIPQDLMDVSVSNLPSLWQPSPRKSSCSSCSQSGSADGGSTNGCNHERAPLKLLCDNMKYQILSRAFYGWLAYCRHLSTVRTHLSALVNHMIVSPDLPCDAGHGLTAGIWEQYLQDSTSYEEQELLRLIYYGGIQPEIRKAVWPFLLGHYQFGMTETERKEVDEQIHACYAQTMSEWLGCEAIVRQRERESHAAALAKCSSGASLDSHLHRMMHRDSTISNESSQSCSSGRQNIRLQSDSSSSTQVFESVDEVEQVEAEGRLEEKQPKIPNGNVVNGTCSPDSGHPSSHNFSSGLSEHSEPSLSTEDSVMDAQRSAPLVLRPRDSSMDDGQSSEATTSRDEVPREELAVQDSLESDLMANESMDEFMSVTGSMDVALPEKEGTVMEGWRGSEVEKHNQVDSEDNLSEEPEMESLFPALASLAVTTSANNEASPVSSSGVTYSPELLDLYTVNLHRIEKDVQRCDRNYWYFTPANLEKLRNIMCSYIWQHIEIGYVQGMCDLLAPLLVILDDEALAFSCFTELMKRMNQNFPHGGAMDTHFANMRSLIQILDSELFELMHQNGDYTHFYFCYRWFLLDFKRELIYDDVFSVWETIWAAKHVSSAHYVLFIALALVEVYRDIILENNMDFTDIIKFFNEMAERHNTKQVLKLARDLVYKVQTLIENK", "length": 1149, "header": "tr|A0A287BIP3-1|A0A287B2S2_PIG Computationally mapped isoform of Small G protein signaling modulator 1 OS=Sus scrofa OX=9823 GN=SGSM1 PE=3 SV=2 CANONICAL=A0A287B2S2-1" }, "locus": { "chromosome": "14", "start_pos": 42972448, "end_pos": 42882324, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050595.3", "url": "https://www.ensembl.org/id/ENSSSCT00000050595.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056243.2", "url": "https://www.ensembl.org/id/ENSSSCP00000056243.2" } ] } }, { "isoform_ac": "F1RGA2-1", "url": "https://www.uniprot.org/uniprotkb/F1RGA2/entry", "sequence": { "sequence": "MASGPAEAETRQRLLRTVKKEVKQIMEEAVTRKFVHEDSSHIISFCAAVEACVLHGLRRRAAGFLRSNKIAALFMKVGKSFPPAEELSRKVQDLEQLIESTRNQIQGLQENVRKLPKLPNLSPLAIKHLWIRTALFEKVLDKIVHYLVENSSKYYEKEALLMDPVDGPILASLLVGPCALEYTKMKTSDHFWTDPSADELVQRHRIHSSHLRQDSPTKRPALCIQKRHSSSSMDDRPSLSARDYVESLHQNSRATLLYGKNNVLVQPRDDMEAVPGYLSLHQTADVMTLKWTPNQLMNGSMGDLDYEKSVYWDYAMTIRLEEIVYLHCHQQVDSGGTVVLVSQDGIQRPPFRFPKGGHLLQFLSCLENGLLPHGQLDPPLWSQRGKGKVFPKLRKRSPQGSSESTSSDKEDDEATDYVFRIIYPGMQSEFVASDPLGSTSPVSVGTAWMVVPVGRSVLVVARGSRWAQTRWDTTLPTSILKQQPPIPQDLMDVSVSNLPSLWQPSPRKSSCSSCSQSGSADGGSTNGCNHERAPLKLLCDNMKYQILSRAFYGWLAYCRHLSTVRTHLSALVNHMIVSPDLPCDAGHGLTAGIWEQYLQDSTSYEEQELLRLIYYGGIQPEIRKAVWPFLLGHYQFGMTETERKESSQSCSSGRQNIRLQSDSSSSTQVFESVDEVEQVEAEGRLEEKQPKIPNGNVVNGTCSPDSGHPSSHNFSSGLSEHSEPSLSTEDSVMDAQRSAPLVLRPRDSSMDDGQSSEATTSRDEVPREELAVQDSLESDLMANESMDEFMSVTGSMDVALPEKEGTVMEGWRGSEVEKHNQVDSEDNLSEEPEMESLFPALASLAVTTSANNEASPVSSSGVTYSPELLDLYTVNLHRIEKDVQRCDRNYWYFTPANLEKLRNIMCSYIWQHIEIGYVQGMCDLLAPLLVILDDEALAFSCFTELMKRMNQNFPHGGAMDTHFANMRSLIQILDSELFELMHQNGDYTHFYFCYRWFLLDFKRELIYDDVFSVWETIWAAKHVSSAHYVLFIALALVEVYRDIILENNMDFTDIIKFFNEMAERHNTKQVLKLARDLVYKVQTLIENK", "length": 1088, "header": "tr|F1RGA2-1|A0A287B2S2_PIG Computationally mapped isoform of Small G protein signaling modulator 1 OS=Sus scrofa OX=9823 GN=SGSM1 PE=3 SV=3 CANONICAL=A0A287B2S2-1" }, "locus": { "chromosome": "14", "start_pos": 42972448, "end_pos": 42882324, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000010903.4", "url": "https://www.ensembl.org/id/ENSSSCT00000010903.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000010618.4", "url": "https://www.ensembl.org/id/ENSSSCP00000010618.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1RGA2", "url": "https://www.uniprot.org/uniprotkb/F1RGA2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152606", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152606", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q2NKQ1-1", "protein_name": "Small G protein signaling modulator 1", "gene_name": "SGSM1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASAPAEAETRQRLLRTVKKEVKQIMEEAVTRKFVHEDSSHIISFCAAVEACVLHGLRRRAAGFLRSNKIAALFMKVGKNFPPAEDLSRKVQDLEQLIESARNQIQGLQENVRKLPKLPNLSPLAIKHLWIRTALFEKVLDKIVHYLVENSSKYYEKEALLMDPVDGPILASLLVGPCALEYTKMKTADHFWTDPSADELVQRHRIHSSHVRQDSPTKRPALCIQKRHSSGSMDDRPSLSARDYVESLHQNSRATLLYGKNNVLVQPRDDMEAVPGYLSLHQTADVMTLKWTPNQLMNGSVGDLDYEKSVYWDYAMTIRLEEIVYLHCHQQVDSGGTVVLVSQDGIQRPPFRFPKGGHLLQFLSCLENGLLPHGQLDPPLWSQRGKGKVFPKLRKRSPQGSAESTSSDKDDDEATDYVFRIIYPGMQSEFVAPDFLGSTSSVSVGPAWMMVPAGRSMLVVARGSQWEPARWDTTLPTPSPKEQPPMPQDLMDVSVSNLPSLWQPSPRKSSCSSCSQSGSADGSSTNGCNHERAPLKLLCDNMKYQILSRAFYGWLAYCRHLSTVRTHLSALVNHMIVSPDLPCDAGQGLTARIWEQYLHDSTSYEEQELLRLIYYGGIQPEIRKAVWPFLLGHYQFGMTETERKEVDEQIHACYAQTMAEWLGCEAIVRQRERESHAAALAKCSSGASLDSHLHRMLHRDSTISNESSQSCSSGRQNIRLHSDSSSSTQVFESVDEVEQVEAEGRLEEKQPKIPNGNLVNGTCSPDSGHPSSHNFSSGLSEHSEPSLSTEDSVLDAQRNTPTVLRPRDGSVDDRQSSEATTSQDEAPREELAVQDSLESDLLANESMDEFMSITGSLDMALPEKDDVVMEGWRSSETEKHGQADSEDNLSEEPEMESLFPALASLAVTTSANEVSPVSSSGVTYSPELLDLYTVNLHRIEKDVQRCDRNYWYFTPANLEKLRNIMCSYIWQHIEIGYVQGMCDLLAPLLVILDDEALAFSCFTELMKRMNQNFPHGGAMDTHFANMRSLIQILDSELFELMHQNGDYTHFYFCYRWFLLDFKRELVYDDVFLVWETIWAAKHVSSAHYVLFIALALVEVYRDIILENNMDFTDIIKFFNEMAERHNTKQVLKLARDLVYKVQTLIENK", "length": 1148 }, "evidence": [ { "id": "A0A287B2S2", "url": "https://omabrowser.org/oma/group/A0A287B2S2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8IQ30-1", "protein_name": "Trabuco, isoform C", "gene_name": "tbc", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MVQGNADGSDYKERLIASVKKEVKQLMEEAVTKKYVHEESSSVTSLCGAVEACLSQGLRRRALGLFKTSSTTALLHKIAKSCPEAEHISKLVQEIEASDPSKRSSSSSDSFQRPPMLKKSSSNSMSTGTNAAASTSSASASISVSASTSSMSLASMKYLWIRLALYEKRLTKIIEYLVSNASSFYDRDSLVADSDYGSILSSLLVGPCALEFTRAKTADHYWTDPHADELVQRHRISSCRRSSSTCSRPAIINFKRSLNTSSDEAGTGSFKSIASASVAKDYVESLHQNAKATLLYGKNNVQVLPKDVAEPMPGYLSLHQHIQTLTIKWTPNQLMNGYTEAEEAEDIDKDAFWAYALNINVDEIVYVHCHQSRGEDSGGTVILVGQDGVQRPPIHFPEGGHMQQFLSCLETGLLPHGQLDPPLWSQRGIGKMFLWPRSMRRRILPSVMESVDETPIDYVFRIVSKSRHEEFAATHSILDFVRSTPRRAQLSSCSTTGSSDCSNKSLSIDQFPMESPLILQQQQQQQQQLLQAQSTSIEMVCSTMRRQIISRAFYGWLAYCRHLSTVRTHLSGLVHGRITPEMKADEEGLTKERWQLLNVNGVLENATEFYRLVYFGGVQPELRQEVWPYLLGHYAFGSTTEDRKKQDETCKHYYETTMSEWLAVDAIVQQREKEKTARAVAKLSSGSNSGNDRTVRAADLEAGGDLENEVFEDISDISDPGDLEFDEQQQQQQQQAECAVSGNHLTVKPIPRAMKTSTDSGHVDESFNELDEPDEEDNKQKQQQDEKISESESKLPDYRKLEEQINQEPSCSASTASSYETVGPGEVHQRPNSDTRSVLSPEYLSADDLQLPDDEDAVRPPPPPAAAAVIITKASVDITNWERSPKAAEGDQMSPLEEQAGESGGAGVNMDALQQPKSACASPASSNGGVYSSELLEQFGLNLHRIEKDVQRCDRNYWYFANENLDKLRNVISTYVWEHLDVGYMQGMCDLVAPLLVIFDDESLSYSCFCKLMERMIENFPSGGAMDMHFANMRSLIQILDSEMYDLMDSNGDYTHFYFCYRWFLLDFKRELVYDDVFATWEVIWAAKHIASGHFVLFLALALLETYRDIILSNSMDFTDVIKFFNEMAERHNAQSVLQLARSLVLQLQMIIENK", "length": 1155 }, "evidence": [ { "id": "A0A287B2S2", "url": "https://omabrowser.org/oma/group/A0A287B2S2/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2S2", "url": "https://www.uniprot.org/uniprotkb/A0A287B2S2" } ], "pmid": "" }, { "name": "small GTPase binding", "id": "GO:0031267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031267", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2S2", "url": "https://www.uniprot.org/uniprotkb/A0A287B2S2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoplasmic vesicle", "id": "GO:0031410", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031410", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2S2", "url": "https://www.uniprot.org/uniprotkb/A0A287B2S2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2S2", "url": "https://www.uniprot.org/uniprotkb/A0A287B2S2" } ], "pmid": "" }, { "name": "cytoplasmic vesicle membrane", "id": "GO:0030659", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030659", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2S2", "url": "https://www.uniprot.org/uniprotkb/A0A287B2S2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 120, "end_pos": 122, "annotation": "n_glycosylation_sequon" }, { "start_pos": 150, "end_pos": 152, "annotation": "n_glycosylation_sequon" }, { "start_pos": 298, "end_pos": 300, "annotation": "n_glycosylation_sequon" }, { "start_pos": 650, "end_pos": 652, "annotation": "n_glycosylation_sequon" }, { "start_pos": 705, "end_pos": 707, "annotation": "n_glycosylation_sequon" }, { "start_pos": 719, "end_pos": 721, "annotation": "n_glycosylation_sequon" }, { "start_pos": 789, "end_pos": 791, "annotation": "n_glycosylation_sequon" }, { "start_pos": 833, "end_pos": 835, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287B2S2-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1094, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287B2S2-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287B2S2" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287B2S2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B2S2" }, { "id": "PS50826", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50826" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RUN", "eco_id": "ECO_0000259", "start_pos": 36, "end_pos": 190, "start_aa": "His", "end_aa": "His", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A287B2S2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B2S2" }, { "id": "PS50086", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50086" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Rab-GAP TBC", "eco_id": "ECO_0000259", "start_pos": 562, "end_pos": 1027, "start_aa": "Gly", "end_aa": "Lys", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 120, "end_pos": 122 }, { "start_pos": 150, "end_pos": 152 }, { "start_pos": 298, "end_pos": 300 }, { "start_pos": 650, "end_pos": 652 }, { "start_pos": 705, "end_pos": 707 }, { "start_pos": 719, "end_pos": 721 }, { "start_pos": 789, "end_pos": 791 }, { "start_pos": 833, "end_pos": 835 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QIA4-1", "uniprot_ac": "A0A5G2QIA4", "uniprot_id": "A0A5G2QIA4_PIG", "mass": { "chemical_mass": 133877.0, "monoisotopic_mass": 133877.0 }, "refseq": {}, "gene_names": [ { "name": "EHMT1", "type": "recommended", "evidence": [ { "id": "A0A5G2QIA4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIA4" } ] } ], "protein_names": [ { "name": "Euchromatic histone lysine methyltransferase 1", "type": "synonym", "evidence": [ { "id": "A0A5G2QIA4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIA4/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIA4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIA4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "EHMT1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIA4", "locus": {} } ], "crossref": [ { "id": "A0A5G2QIA4", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QIA4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000038437", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000038437", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd10535", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd10535", "database": "CDD", "categories": [ "Protein 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"database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046341", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046341", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047762", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047762", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR46307", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46307", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46307:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46307:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00856", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00856", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF05033", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05033", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12796", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13637", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13637", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21533", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21533", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-2559582", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2559582", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-3214841", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3214841", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-6804760", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6804760", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8953750", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8953750", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287B842", "url": "https://www.uniprot.org/uniprotkb/A0A287B842", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B842-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B842-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QIA4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIA4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QIA4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIA4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAADAEAVPAKGETKQDCPRAELLREGSPMAADEGAADKQGGEAPEAADGEANGACDQSDGGSPPAAAKHTQEGARVGPQEGAGPVARIAENGLADRDAEPAKQNHVRADGFAQTPGVGSNGYFLGKAPVSEPPRIASALAASLPGHAAKTLPSGAARGRTPGTLPPPPAAPPAKPGEVSRDTEDKKPPAPGADVKVHRARKTMPKSILGLHAASKDPREGRDARDHEEPKEEMSRGASDFGRQQLLPPFPPLHQSLPQNQCYVASSKSQTACLPFVLAAAVSRKKKRRMGTYSLVPKKKAKVLKQRTVIEMFQSIAHSSAGRQGEKDPGDGSLHVNGESLDLDSEDDDSEELDEDEDQGAQQEDSRTSKESALEPDRAQKVDGESEEEQESAGTGEEEDGDESDLSSESSIKKKFLKRKGKPDSPWIKPARKRRRRSKKKPSSMLGSEACASPSGSAEPMAPGDGSGYMEVSLDSLDLRVKGTLPLETEGLANGPDVGETDGLQEVPLCSCRMETPKSREITTLANNQCMATESVDHQLGRCTNSVVKHELMRPSSKAPLLVLCEDHRGRMVKHQCCPGCGYFCTAGNFMECQPESSISHRFHKDCASRVNNASYCPHCGEETSKAKEVTIAKADTTSTVTLAPGQEKSSTVEGRADTTTGSAAGPLLSEDDKPQSTAPRVPEGFDPTGPVGLGKPAPGLSQGPGKETLESALIALDSEKPKKLRFHPKQLYFSARQGELQKVLLMLVDGIDPNFKMEHQNKRSPLHAAAEAGHVDICHMLIQAGANIDTCSEDQRTPLMEAAENNHLDAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYDVVQYLLSSGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQVSQALRDAAPDRPAPVERTMSRDIARGYERAPIPCVNAVDDEPCPSNYKYVAQNCVTSPMAIDRNITHLQYCVCVDDCSSSNCMCGQLSMRCWYDKDGRLLPEFNMAEPPLLFECNHACSCWRNCRNRVVQNGLRTRLQLYRTQNMGWGVRSLQDIPLGTFVCEYVGELISDSEADVREEDSYLFDLDNKDGELYCIDARFYGNVSRFINHHCEPNLVPVRVFMSHQDLRFPRIAFFSTRLIEAGEQLGFDYGERFWDIKGKLFSCRCGSPKCRHSSSALAQRQASAAQGAPEDRLPDTSSAAADPL", 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protein uL4m OS=Sus scrofa OX=9823 GN=MRPL4 PE=1 SV=2 CANONICAL=A0A287B2W3-1" }, "locus": { "chromosome": "2", "start_pos": 69082031, "end_pos": 69074289, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052018.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052018.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050437.2", "url": "https://www.ensembl.org/id/ENSSSCP00000050437.2" } ] } }, { "isoform_ac": "A0A287B9C4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9C4/entry", "sequence": { "sequence": "MLQLVRAGARTWFRPSGCRGLNTLAEEAVQQAEKPESVASLGLQPPVLRKCELPVPAHRRPVQAWIESLRGYEQERVGLTELHPDVFSTAPRLDILHQVAIWQKNFKRISYAKTKTRAEVRGGGRKPWVQKGSGRARHGSIRSPIWRGGGVAHGPRGPTSYYYMLPMKVRVQGLKVALTVKLAQDDLHIVDSLELPTADPQYLIELARYRRWGDSVLLVDLEHEDMPQNVVAATSGLKTFNLVPAVGLVVLQSKCGPESTEGTVWKPELSSQ", "length": 272, "header": "tr|A0A287B9C4-1|A0A287B2W3_PIG Computationally mapped isoform of Large ribosomal subunit protein uL4m OS=Sus scrofa OX=9823 GN=MRPL4 PE=1 SV=3 CANONICAL=A0A287B2W3-1" }, "locus": { "chromosome": "2", "start_pos": 69082618, "end_pos": 69074289, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051847.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051847.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052934.3", "url": "https://www.ensembl.org/id/ENSSSCP00000052934.3" } ] } }, { "isoform_ac": "A0A4X1V0M8-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V0M8/entry", "sequence": { "sequence": "TKVGVRGSSLTLAVCLQGLNTLAEEAVQQAEKPESVASLGLQPPVLRKCELPVPAHRRPVQAWIESLRGYEQERVGLTELHPDVFSTAPRLDILHQVAIWQKNFKRISYAKTKTRAEVRGGGRKPWVQKGSGRARHGSIRSPIWRGGGVAHGPRGPTSYYYMLPMKVRVQGLKVALTVKLAQDDLHIVDSLELPTADPQYLIELARYRRWGDSVLLVDL", "length": 219, "header": "tr|A0A4X1V0M8-1|A0A4X1V0M8_PIG Computationally mapped isoform of Large ribosomal subunit protein uL4m OS=Sus scrofa OX=9823 GN=MRPL4 PE=1 SV=1 CANONICAL=A0A287B2W3-1" }, "locus": { "chromosome": "2", "start_pos": 69080688, "end_pos": 69074378, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079084.1", "url": "https://www.ensembl.org/id/ENSSSCT00000079084.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060131.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060131.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM.", "journal": "Nature", "date": "2018", "authors": "Kummer Eva, Leibundgut Marc, Rackham Oliver, Lee Richard G, Boehringer Daniel, Filipovska Aleksandra, Ban Nenad", "evidence": [ { "database": "UniProtKB", "id": "A0A287B9C4", "url": "https://www.uniprot.org/uniprotkb/A0A287B9C4" } ], "reference": [ { "type": "PubMed", "id": "30089917", "url": "https://glygen.org/publication/PubMed/30089917" } ] }, { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B9C4", "url": "https://www.uniprot.org/uniprotkb/A0A287B9C4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] }, { "title": "Structural insights into mammalian mitochondrial translation elongation catalyzed by mtEFG1.", "journal": "EMBO J.", "date": "2020", "authors": "Kummer E, Ban N", "evidence": [ { "database": "UniProtKB", "id": "A0A287B9C4", "url": "https://www.uniprot.org/uniprotkb/A0A287B9C4" } ], "reference": [ { "type": "PubMed", "id": "32602580", "url": "https://glygen.org/publication/PubMed/32602580" } ] }, { "title": "Structural basis of translation termination, rescue, and recycling in mammalian mitochondria.", "journal": "Mol. Cell", "date": "2021", "authors": "Kummer Eva, Schubert Katharina Noel, Schoenhut Tanja, Scaiola Alain, Ban Nenad", "evidence": [ { "database": "UniProtKB", "id": "A0A287B9C4", "url": "https://www.uniprot.org/uniprotkb/A0A287B9C4" } ], "reference": [ { "type": "PubMed", "id": "33878294", "url": "https://glygen.org/publication/PubMed/33878294" } ] }, { "title": "Molecular basis of translation termination at noncanonical stop codons in human mitochondria.", "journal": "Science", "date": "2023", "authors": "Saurer Martin, Leibundgut Marc, Nadimpalli Hima Priyanka, Scaiola Alain, Sch\u00f6nhut Tanja, Lee Richard G, Siira Stefan J, Rackham Oliver, Dreos Ren\u00e9, Lenar\u010di\u010d Tea, Kummer Eva, Gatfield David, Filipovska Aleksandra, Ban Nenad", "evidence": [ { "database": "UniProtKB", "id": "A0A287B9C4", "url": "https://www.uniprot.org/uniprotkb/A0A287B9C4" } ], "reference": [ { "type": "PubMed", "id": "37141370", "url": "https://glygen.org/publication/PubMed/37141370" } ] } ], 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Classification" ] }, { "id": "IPR046347", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046347", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051027", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051027", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "HHTDINP", "url": "https://omabrowser.org/oma/group/HHTDINP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR19304", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19304", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00170", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00170", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013841203", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013841203", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287BSN4", "url": "https://www.uniprot.org/uniprotkb/A0A287BSN4", "database": 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"MNLEQERPFVCSAPGCSQRFPTEDHLMIHRHKHEMTLKFPSIKTDNMLSDQTPTPTRFLKNCEEVGLFSELDCSLEHEFRKAQEEESSKRNISMHNAVGGAMAGPGAHQLGSTRMPSHDTSVVIQQAMPSPQSSSVITQAPSTNRQIGPVPGSLSSLLHLHNRQRQPMPASMPGTLPNPTMPGSSAVLMPMERQMSVNSNLLGMQGPNLSNPCASPQVQPMHSEAKMRLKAALTHHPAAMSNGNMNTMGHMMEMMGSRQDQTPHHHMHSHPHQHQTLPAHHPYPHQHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHSGNQAQQVSPATQQMQPTQTIQPPQPTGGRRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEVSMLKNEVAQLKQLLLTHKDCPITAMQKESQGYLSPESSPPASPVPTCSQQQVIQHNTITTSSAVSEVVGSSTLSQLTTHRTDLNPIL", "length": 504, "header": "tr|A0A5G2QJZ8-1|A0A5G2QJZ8_PIG Isoform 1 of Cyclic AMP-responsive element-binding protein 5 OS=Sus scrofa OX=9823 GN=CREB5 PE=3 SV=1 CANONICAL=A0A5G2QJZ8-1" }, "isoforms": [ { "isoform_ac": "A0A287BSN4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BSN4/entry", "sequence": { "sequence": "MFCTSGGNSASVMSMRPVPGSLSSLLHLHNRQRQPMPASMPGTLPNPTMPGSSAVLMPMERQMSVNSNLLGMQGPNLSNPCASPQVQPMHSEAKMRLKAALTHHPAAMSNGNMNTMGHMMEMMGSRQDQTPHHHMHSHPHQHQTLPAHHPYPHQHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHSGNQAQVSPATQQMQPTQTIQPPQPTGGRRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEVSMLKNEVAQLKQLLLTHKDCPITAMQKESQGYLSPESSPPASPVPTCSQQQVIQHNTITTSSAVSEVVGSSTLSQLTTHRTDLNPIL", "length": 371, "header": "tr|A0A287BSN4-1|A0A5G2QJZ8_PIG Computationally mapped isoform of Cyclic AMP-responsive element-binding protein 5 OS=Sus scrofa OX=9823 GN=CREB5 PE=3 SV=2 CANONICAL=A0A5G2QJZ8-1" }, "locus": { "chromosome": "18", "start_pos": 43975959, "end_pos": 43846840, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051038.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051038.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059534.2", "url": "https://www.ensembl.org/id/ENSSSCP00000059534.2" } ] } }, { "isoform_ac": "A0A5G2QJZ8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJZ8/entry", "sequence": { "sequence": "MNLEQERPFVCSAPGCSQRFPTEDHLMIHRHKHEMTLKFPSIKTDNMLSDQTPTPTRFLKNCEEVGLFSELDCSLEHEFRKAQEEESSKRNISMHNAVGGAMAGPGAHQLGSTRMPSHDTSVVIQQAMPSPQSSSVITQAPSTNRQIGPVPGSLSSLLHLHNRQRQPMPASMPGTLPNPTMPGSSAVLMPMERQMSVNSNLLGMQGPNLSNPCASPQVQPMHSEAKMRLKAALTHHPAAMSNGNMNTMGHMMEMMGSRQDQTPHHHMHSHPHQHQTLPAHHPYPHQHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHSGNQAQQVSPATQQMQPTQTIQPPQPTGGRRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEVSMLKNEVAQLKQLLLTHKDCPITAMQKESQGYLSPESSPPASPVPTCSQQQVIQHNTITTSSAVSEVVGSSTLSQLTTHRTDLNPIL", "length": 504, "header": "tr|A0A5G2QJZ8-1|A0A5G2QJZ8_PIG Isoform 1 of Cyclic AMP-responsive element-binding protein 5 OS=Sus scrofa OX=9823 GN=CREB5 PE=3 SV=1 CANONICAL=A0A5G2QJZ8-1" }, "locus": { "chromosome": "18", "start_pos": 44186497, "end_pos": 43846840, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084961.1", "url": "https://www.ensembl.org/id/ENSSSCT00000084961.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064823.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064823.1" } ] } }, { "isoform_ac": "F1SIG1-1", "url": "https://www.uniprot.org/uniprotkb/F1SIG1/entry", "sequence": { "sequence": "MIYEESKMNLEQERPFVCSAPGCSQRFPTEDHLMIHRHKHEMTLKFPSIKTDNMLSDQTPTPTRFLKNCEEVGLFSELDCSLEHEFRKAQEEESSKRNISMHNAVGGAMAGPGAHQLGSTRMPSHDTSVVIQQAMPSPQSSSVITQAPSTNRQIGPVPGSLSSLLHLHNRQRQPMPASMPGTLPNPTMPGSSAVLMPMERQMSVNSNLLGMQGPNLSNPCASPQVQPMHSEAKMRLKAALTHHPAAMSNGNMNTMGHMMEMMGSRQDQTPHHHMHSHPHQHQTLPAHHPYPHQHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHSGNQAQVSPATQQMQPTQTIQPPQPTGGRRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEVSMLKNEVAQLKQLLLTHKDCPITAMQKESQGYLSPESSPPASPVPTCSQQQVIQHNTITTSSAVSEVVGSSTLSQLTTHRTDLNPIL", "length": 510, "header": "tr|F1SIG1-1|F1SIG1_PIG Computationally mapped isoform of cAMP responsive element binding protein 5 OS=Sus scrofa OX=9823 GN=CREB5 PE=4 SV=4 CANONICAL=A0A5G2QJZ8-1" }, "locus": { "chromosome": "18", "start_pos": 44260832, "end_pos": 43846840, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018171.5", "url": "https://www.ensembl.org/id/ENSSSCT00000018171.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017680.4", "url": "https://www.ensembl.org/id/ENSSSCP00000017680.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 358, "start_aa": "Thr", "end_pos": 358, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr358", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287BSN4", "url": "https://www.uniprot.org/uniprotkb/A0A287BSN4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0ABK0LPZ0-1", "protein_name": "Cyclic AMP-responsive element-binding protein 5", "gene_name": "Creb5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIYEESKMNLEQERPFVCSAPGCSQRFPTEDHLMIHRHKHEMTLKFPSIKTDNMLSDQTPTPTRFLKNCEEVGLFSELDCSFEHEFRKAQEEESSKRNISMHNTVGGTMTGPGAHQLGSSRMPNHDTSVVIQQAMPSPQSSSVITQAPSTNRQIGPVPGSLSSLLHLHNRQRQPMPASMPGTLPNPTMPGSSAVLMPMERQMSVNSSIMGMQGPNLSNPCASPQVQPMHSEAKMRLKAALTHHPAAMSNGNMSTIGHMMEMMGSRQDQTPHHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGNQAQVSPATQQMQPTQTIQPPQPTGGRRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEVSMLKNEVAQLKQLLLTHKDCPITAMQKESQGYLSPESSPPASPVPACSQQQVIQHNTITTSSSVSEVVGSSTLSQLTSHRTDLNPIL", "length": 508 }, "evidence": [ { "id": "A0A5G2QJZ8", "url": "https://omabrowser.org/oma/group/A0A5G2QJZ8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q02930-1", "protein_name": "Cyclic AMP-responsive element-binding protein 5", "gene_name": "CREB5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MIYEESKMNLEQERPFVCSAPGCSQRFPTEDHLMIHRHKHEMTLKFPSIKTDNMLSDQTPTPTRFLKNCEEVGLFSELDCSLEHEFRKAQEEESSKRNISMHNAVGGAMTGPGTHQLSSARLPNHDTNVVIQQAMPSPQSSSVITQAPSTNRQIGPVPGSLSSLLHLHNRQRQPMPASMPGTLPNPTMPGSSAVLMPMERQMSVNSSIMGMQGPNLSNPCASPQVQPMHSEAKMRLKAALTHHPAAMSNGNMNTMGHMMEMMGSRQDQTPHHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGNQAQVSPATQQMQPTQTIQPPQPTGGRRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEVSMLKNEVAQLKQLLLTHKDCPITAMQKESQGYLSPESSPPASPVPACSQQQVIQHNTITTSSSVSEVVGSSTLSQLTTHRTDLNPIL", "length": 508 }, "evidence": [ { "id": "A0A5G2QJZ8", "url": "https://omabrowser.org/oma/group/A0A5G2QJZ8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8K1L0-1", "protein_name": "Cyclic AMP-responsive element-binding protein 5", "gene_name": "Creb5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMRPVPGSLSSLLHLHNRQRQPMPASMPGTLPNPTMPGSSAVLMPMERQMSVNSSIMGMQGPNLSNPCASPQVQPMHSEAKMRLKAALTHHPAAMSNGNMSTIGHMMEMMGSRQDQTPHHHLHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGNQAQVSPATQQMQPTQTIQPPQPTGGRRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEVSMLKNEVAQLKQLLLTHKDCPITAMQKESQGYLSPESSPPASPVPACSQQQVIQHNTITTSSSVSEVVGSSTLSQLTTHRTDLNPIL", "length": 357 }, "evidence": [ { "id": "A0A5G2QJZ8", "url": "https://omabrowser.org/oma/group/A0A5G2QJZ8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJZ8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJZ8" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJZ8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJZ8" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJZ8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJZ8" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJZ8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJZ8" } ], "pmid": "" }, { "name": "cAMP response element binding", "id": "GO:0035497", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035497", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJZ8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJZ8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJZ8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJZ8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJZ8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJZ8" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJZ8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJZ8" } ], "pmid": "" }, { "name": "positive regulation of DNA-templated transcription", "id": "GO:0045893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045893", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJZ8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJZ8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 208, "end_pos": 210, "annotation": "n_glycosylation_sequon" }, { "start_pos": 91, "end_pos": 93, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QJZ8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 504, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QJZ8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QJZ8" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QJZ8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJZ8" }, { "id": "PS50217", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50217" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "BZIP", "eco_id": "ECO_0000259", "start_pos": 371, "end_pos": 434, "start_aa": "Asp", "end_aa": "His", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A5G2QJZ8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJZ8" }, { "id": "PS50157", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50157" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2H2-type", "eco_id": "ECO_0000259", "start_pos": 9, "end_pos": 33, "start_aa": "Phe", "end_aa": "His", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 358 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 208, "end_pos": 210 }, { "start_pos": 91, "end_pos": 93 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QKF6-1", "uniprot_ac": "A0A5G2QKF6", "uniprot_id": "A0A5G2QKF6_PIG", "mass": { "chemical_mass": 32103.0, "monoisotopic_mass": 32103.0 }, "refseq": { "ac": "NP_001231019", "name": "protein SET isoform 2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231019" }, "gene_names": [ { "name": "SET", "type": "recommended", "evidence": [ { "id": "A0A5G2QKF6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKF6" } ] }, { "name": "SET", "type": "synonym", "evidence": [ { "id": "NP_001231019", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231019" } ] } ], "protein_names": [ { "name": "SET nuclear oncogene", "type": "synonym", "evidence": [ { "id": "NP_001231019", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231019" } ] }, { "name": "SET nuclear proto-onco", "type": "synonym", "evidence": [ { "id": "A0A5G2QKF6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKF6/entry#names_and_taxonomy" } ] }, { "name": "protein SET isoform 2", "type": "synonym", "evidence": [ { "id": "NP_001231019", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231019" } ] }, { "name": "protein SET", "type": "synonym", "evidence": [ { "id": "NP_001231019", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231019" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKF6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKF6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SET", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKF6", "locus": {} } ], "crossref": [ { "id": "A0A5G2QKF6", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QKF6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000005656", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005656", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100514028", "url": "https://www.ncbi.nlm.nih.gov/gene/100514028", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002164", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002164", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037231", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037231", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100514028", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514028", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1TQV6", "url": "https://www.orthodb.org/?gene=A0A4X1TQV6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QKF6", "url": "https://www.orthodb.org/?gene=A0A5G2QKF6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11875", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11875", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00956", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00956", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001231019", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231019", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1TQV6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TQV6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TQV6-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TQV6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QBC5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBC5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QBC5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBC5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QKF6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKF6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QKF6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKF6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RF55", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RF55", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RF55-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RF55-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RR69", "url": "https://www.uniprot.org/uniprotkb/F1RR69", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RR69-1", "url": "https://www.uniprot.org/uniprotkb/F1RR69-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSAPAAKVSKKELNSNHDGADETSEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDEEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD", "length": 277, "header": "tr|A0A5G2QKF6-1|A0A5G2QKF6_PIG Isoform 1 of SET nuclear proto-onco OS=Sus scrofa OX=9823 GN=SET PE=1 SV=2 CANONICAL=A0A5G2QKF6-1" }, "isoforms": [ { "isoform_ac": "A0A4X1TQV6-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TQV6/entry", "sequence": { "sequence": "MAPKHQSALPPQAKKPRKPRLTPAPKPEETSNLPKEEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDEEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD", "length": 289, "header": "tr|A0A4X1TQV6-1|A0A4X1TQV6_PIG Computationally mapped isoform of SET nuclear proto-onco OS=Sus scrofa OX=9823 GN=SET PE=1 SV=1 CANONICAL=A0A5G2QKF6-1" }, "locus": { "chromosome": "1", "start_pos": 269062678, "end_pos": 269050564, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089344.2", "url": "https://www.ensembl.org/id/ENSSSCT00000089344.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064509.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064509.1" } ] } }, { "isoform_ac": "A0A5G2QBC5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBC5/entry", "sequence": { "sequence": "MSAPAAKVSKKELNSNHDGADETSEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLCSVALFLRSLFSFLPWFSIYFGGKYLGQNSVGKESLPLSVPNSFLSLPVSTKTLWNQHHHALWEKRKTFCSLSSAGSWRVLGPCVVVHRILAFFLLSLYIGLRDYTVSLCEYGQLAFTNMYLSTFSCLKKEKK", "length": 354, "header": "tr|A0A5G2QBC5-1|A0A5G2QKF6_PIG Computationally mapped isoform of SET nuclear proto-onco OS=Sus scrofa OX=9823 GN=SET PE=1 SV=1 CANONICAL=A0A5G2QKF6-1" }, "locus": { "chromosome": "1", "start_pos": 269063170, "end_pos": 269056717, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077388.2", "url": "https://www.ensembl.org/id/ENSSSCT00000077388.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061349.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061349.1" } ] } }, { "isoform_ac": "A0A5G2QKF6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKF6/entry", "sequence": { "sequence": "MSAPAAKVSKKELNSNHDGADETSEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDEEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD", "length": 277, "header": "tr|A0A5G2QKF6-1|A0A5G2QKF6_PIG Isoform 1 of SET nuclear proto-onco OS=Sus scrofa OX=9823 GN=SET PE=1 SV=2 CANONICAL=A0A5G2QKF6-1" }, "locus": { "chromosome": "1", "start_pos": 269062678, "end_pos": 269056717, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083068.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083068.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065003.2", "url": 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"MAASDTERDGLAPEKTSPDREKKKEQSDVSVSPRASKHHYSRSRSRSRERKRKSDNEGRKHRSRSRSKEARRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRSRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQEMAAAAAATGGSVLNVAALLASGTQVTPQIAMAAQMAALQAKALAETGIAVPSYYNPAAVNPMKFAEQEKKRKMLWQGKKEGDKSQSAEIWEKLNFGNKDQNVKFRKLMGIKSEDEAGCSSVDEESYKTLKQQEEVFRNLDAQYEMARSQTHTQRGMGLGFTSSMRGMDAV", "length": 435, "header": "tr|A0A287B2I4-1|A0A287B2I4_PIG Isoform 1 of Arginine/serine-rich coiled-coil protein 2 OS=Sus scrofa OX=9823 GN=RSRC2 PE=3 SV=1 CANONICAL=A0A287B2I4-1" }, "isoforms": [ { "isoform_ac": "A0A287AB24-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AB24/entry", "sequence": { "sequence": "LSLLHYFPERTNFFLKQARRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRSRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMASGTQVTPQIAMAAQMAALQAKALAETGIAVPSYYNPAAVNPMKFAEQEKKRKMLWQGKKEGDKSQSAEIWEKLNFGNKDQNVKFRKLMGIKSEDEAGCSSVDEESYKTLKQQEEVFRNLDAQYEMARSQTHTQRGMGLGFTSSMRGMDAV", "length": 356, "header": "tr|A0A287AB24-1|A0A287B2I4_PIG Computationally mapped isoform of Arginine/serine-rich coiled-coil protein 2 OS=Sus scrofa OX=9823 GN=RSRC2 PE=3 SV=2 CANONICAL=A0A287B2I4-1" }, "locus": { "chromosome": "14", "start_pos": 30260355, "end_pos": 30250988, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064486.3", "url": "https://www.ensembl.org/id/ENSSSCT00000064486.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041009.2", "url": "https://www.ensembl.org/id/ENSSSCP00000041009.2" } ] } }, { "isoform_ac": "A0A287B2I4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B2I4/entry", "sequence": { "sequence": "MAASDTERDGLAPEKTSPDREKKKEQSDVSVSPRASKHHYSRSRSRSRERKRKSDNEGRKHRSRSRSKEARRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRSRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQEMAAAAAATGGSVLNVAALLASGTQVTPQIAMAAQMAALQAKALAETGIAVPSYYNPAAVNPMKFAEQEKKRKMLWQGKKEGDKSQSAEIWEKLNFGNKDQNVKFRKLMGIKSEDEAGCSSVDEESYKTLKQQEEVFRNLDAQYEMARSQTHTQRGMGLGFTSSMRGMDAV", "length": 435, "header": "tr|A0A287B2I4-1|A0A287B2I4_PIG Isoform 1 of Arginine/serine-rich coiled-coil protein 2 OS=Sus scrofa OX=9823 GN=RSRC2 PE=3 SV=1 CANONICAL=A0A287B2I4-1" }, "locus": { "chromosome": "14", "start_pos": 30260355, "end_pos": 30242240, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046981.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046981.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050616.1", "url": "https://www.ensembl.org/id/ENSSSCP00000050616.1" } ] } }, { "isoform_ac": "F1REW7-1", "url": "https://www.uniprot.org/uniprotkb/F1REW7/entry", "sequence": { "sequence": "MIRTNFFLKQARRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRSRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQEMAAAAAATGGSVLNVAALLASGTQVTPQIAMAAQMAALQAKALAETGIAVPSYYNPAAVNPMKFAEQEKKRKMLWQGKKEGDKSQSAEIWEKLNFGNKDQNVKFRKLMGIKSEDEAGCSSVDEESYKTLKQQEEVFRNLDAQYEMARSQTHTQRGMGLGFTSSMRGMDAV", "length": 376, "header": "tr|F1REW7-1|A0A287B2I4_PIG Computationally mapped isoform of Arginine/serine-rich coiled-coil protein 2 OS=Sus scrofa OX=9823 GN=RSRC2 PE=3 SV=3 CANONICAL=A0A287B2I4-1" }, "locus": { "chromosome": "14", "start_pos": 30260355, "end_pos": 30249437, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000010733.3", "url": "https://www.ensembl.org/id/ENSSSCT00000010733.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000010453.3", "url": "https://www.ensembl.org/id/ENSSSCP00000010453.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1REW7", "url": "https://www.uniprot.org/uniprotkb/F1REW7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZY10-1", "protein_name": "Arginine/serine-rich coiled-coil protein 2", "gene_name": "RSRC2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "GSGSGSRERGERSGPPHFWGSDTERDGVVPEKSSPEREKKKEQSDASSSPRTSKHHYSRSRSRSRERRRKSDAEGRKHRSRSRSKEARRHESKEKSSKKHKSEDHNDKEHSSDKGRESLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRDRKKSRSRSRERKRRVRSRSRSRSRHRHRSRSRSRTRSRSRERKKRIEKPRRFSRSHSRSPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQEMAAAAAATGGSVINVAALLASGTQVTPQIAMAAQMAALQAKALAETGIAVPSYYNPAAVNPMKFAEQEKKRKMLWQGKKEGDKSQSAEIWEKLNFGNKDQNVKFRKLMGIKSEDEAGCSSVDEESYKTLKQQEEVFRNLDAQYEMARSQTHTQRGMGLGFTSSMRGMDAV", "length": 432 }, "evidence": [ { "id": "A0A287B2I4", "url": "https://omabrowser.org/oma/group/A0A287B2I4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A6QLS2-1", "protein_name": "Arginine/serine-rich coiled-coil protein 2", "gene_name": "RSRC2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAASDTERDGLAPEKTSPDTDKKKEQSDVSVSPRASKHHYSRSRSRSRERKRKSDNEGRKHRSRSRSKEARRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRDRKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRSRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQEIAAAAAATGGSVLNVAALLASGTQVTPQIAMAAQMAALQAKALAETGIAVPSYYNPAAVNPMKFAEQEKKRKMLWQGKKEGDKSQSAEIWEKLNFGNKDQNVKFRKLMGIKSEDEAGCSSVDEESYKTLKQQEEVFRNLDAQYEMARSQTHTQRGMGLGFTSSMRGMDTV", "length": 435 }, "evidence": [ { "id": "A0A287B2I4", "url": "https://omabrowser.org/oma/group/A0A287B2I4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5PQR4-1", "protein_name": "Arginine/serine-rich coiled-coil protein 2", "gene_name": "Rsrc2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIRTNFLLKQARRHESKDKSSKRHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRDRKKSRSRSRDRKKSRSRSRDRKRRIRTRSRSRSRHRHRTRSRSRSRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQEMAAAAAATGGSVLNVAALLASGTQVTPQIAMAAQMAALQAKALAETGIAVPSYYNPAAVNPMKFAEQEKKRKMLWQGKKEGDKSQSAEIWEKLNFGNKDQNVKFRKLMGIKSEDEAGCSSVDEESYKTLKQQEEVFRNLDAQYEMARSQTHTQRGMGLGFTSSMRGMDTV", "length": 376 }, "evidence": [ { "id": "A0A287B2I4", "url": "https://omabrowser.org/oma/group/A0A287B2I4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6NWI1-1", "protein_name": "Arginine/serine-rich coiled-coil protein 2", "gene_name": "rsrc2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAANDAELHDSFSGKSQPGENRKASRSSKHCSRSRSRSTERKRKSGDKRHKRSHSRSKEARKKDSEKALKCQSGSEERLEFSDKGRDRLSEDTEERHRRKDKKTSRPRSHSRSRSKEKRHHNRNWDKRRSRSRSRSRDKKRRARSRSNSRSKHRHRSRSRSKSREKKKRIEKSRKKSRSPSISPVTFRGRNTAMDAQEALARRLERAKKLQEQKEKDMLEKWQHQEKAAASTPQCDPAAAAPSPALNVAALLASGTQVTPQIAMAAQMAALQAKTLAETGIAVPSYYNPSAVNPMKFAEQEKKRKMLWQGKKEGDNKSQTAELWEKLNFGNKDQNVKFRKLMGIKGEEEAASSAAVNEDGLKTLQQQEEMFRNLDVQYEMARSQTHTQRGMGLGFSSSFSSRGMDAV", "length": 407 }, "evidence": [ { "id": "A0A287B2I4", "url": "https://omabrowser.org/oma/group/A0A287B2I4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q7L4I2-1", "protein_name": "Arginine/serine-rich coiled-coil protein 2", "gene_name": "RSRC2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAASDTERDGLAPEKTSPDRDKKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEGRKHRSRSRSKEGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQEIAAAAATGGSVLNVAALLASGTQVTPQIAMAAQMAALQAKALAETGIAVPSYYNPAAVNPMKFAEQEKKRKMLWQGKKEGDKSQSAEIWEKLNFGNKDQNVKFRKLMGIKSEDEAGCSSVDEESYKTLKQQEEVFRNLDAQYEMARSQTHTQRGMGLGFTSSMRGMDAV", "length": 434 }, "evidence": [ { "id": "A0A287B2I4", "url": "https://omabrowser.org/oma/group/A0A287B2I4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 103, "end_pos": 105, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287B2I4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B2I4" }, { "id": "PF15477", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15477" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Small acidic protein-like", "eco_id": "ECO_0000259", "start_pos": 355, "end_pos": 424, "start_aa": "Trp", "end_aa": "Gly", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 103, "end_pos": 105 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B2R2-1", "uniprot_ac": "A0A287B2R2", "uniprot_id": "A0A287B2R2_PIG", "mass": { "chemical_mass": 62029.0, "monoisotopic_mass": 62029.0 }, "refseq": { "ac": "XP_003130450", "name": "protein angel homolog 2 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130450" }, "gene_names": [ { "name": "ANGEL2", "type": "recommended", "evidence": [ { "id": "A0A287B2R2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B2R2" } ] }, { "name": "ANGEL2", "type": "synonym", "evidence": [ { "id": "XP_003130450", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130450" } ] } ], "protein_names": [ { "name": "Angel homolog 2", "type": "synonym", "evidence": [ { "id": "A0A287B2R2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B2R2/entry#names_and_taxonomy" } ] }, { "name": "protein angel homolog 2 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_003130450", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130450" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B2R2", "url": "https://www.uniprot.org/uniprotkb/A0A287B2R2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ANGEL2", "url": "https://www.uniprot.org/uniprotkb/A0A287B2R2", "locus": { "chromosome": "9", "start_pos": 130474921, "end_pos": 130453920, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015588", "url": "https://www.ensembl.org/id/ENSSSCG00000015588" } ] } } ], "crossref": [ { "id": "ENSSSCG00000015588", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015588", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100523200", "url": "https://www.ncbi.nlm.nih.gov/gene/100523200", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR005135", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005135", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036691", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036691", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045816", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045816", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050410", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050410", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100523200", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100523200", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WRPPQFC", "url": "https://omabrowser.org/oma/group/WRPPQFC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287B2R2", "url": "https://www.orthodb.org/?gene=A0A287B2R2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A287BDZ0", "url": "https://www.orthodb.org/?gene=A0A287BDZ0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12121", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12121", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12121:SF27", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12121:SF27", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03372", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03372", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF19339", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19339", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003130450", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130450", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AMX3", "url": "https://www.uniprot.org/uniprotkb/A0A287AMX3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AMX3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AMX3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B2R2", "url": "https://www.uniprot.org/uniprotkb/A0A287B2R2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B2R2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B2R2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BDZ0", "url": "https://www.uniprot.org/uniprotkb/A0A287BDZ0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BDZ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BDZ0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S2X8", "url": "https://www.uniprot.org/uniprotkb/F1S2X8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S2X8-1", "url": "https://www.uniprot.org/uniprotkb/F1S2X8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEAWRCVRRGYGRCVVGRGRYPMLPHHQKSLGRDWTTPWENLQRCCWNRHISSCMRWPGHYSRAPYPYFSSRHFSLNWKPPCLFESRTQFQSWNWRPDNLSQTSLIHLSSYIMNSEGDEPSSKRRKHQGTIKRHWEYMCNHNKEKTKILGEKNGDPVCDNSENKFDFSVMSYNILSQDLLEDNSHLYRHCRQPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGTEIRPSLESLGYHCEYKMRTGKKPDGCAICFKHSKFSLLSVNPVEFFRPNVPLLDRDNVGLVLLLQPKSPSAASPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSVAHQKDGSFCPIVICGDFNSVPGSPLYSFIKEGKLNYEGLAIGKVSGQEQSSRGQRILSIPIWPPNLGISQNCVYEVQQVPKVEKTGSDLTQTQVDKTEVLVTDEKLSSNLQHHFSLSSVYSHYFPETGIPEVTTCHSRSAITVDYIFYSAEKEGVAGQQGAGVALVGGLKLLARLSLLTEQDLWTVNGLPNENNSSDHLPLLAKFRLDL", "length": 544, "header": "tr|A0A287B2R2-1|A0A287B2R2_PIG Isoform 1 of Angel homolog 2 OS=Sus scrofa OX=9823 GN=ANGEL2 PE=4 SV=1 CANONICAL=A0A287B2R2-1" }, "isoforms": [ { "isoform_ac": "A0A287AMX3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AMX3/entry", "sequence": { "sequence": "MSLHQNGENTKVLCLQEVQEDHYGTEIRPSLESLGYHCEYKMRTGKKPDGCAICFKHSKFSLLSVNPVEFFRPNVPLLDRDNVGLVLLLQPKSPSAASPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSVAHQKDGSFCPIVICGDFNSVPGSPLYSFIKEGKLNYEGLAIGKVSGQEQSSRGQRILSIPIWPPNLGISQNCVYEVQQVPKVEKTGSDLTQTQVDKTEVLVTDEKLSSNLQHHFSLSSVYSHYFPETGIPEVTTCHSRSAITVDYIFYSAEKEGVAGQQGAGVALVGGLKLLARLSLLTEQDLWTVNGLPNENNSSDHLPLLAKFRLDL", "length": 341, "header": "tr|A0A287AMX3-1|A0A287B2R2_PIG Computationally mapped isoform of Angel homolog 2 OS=Sus scrofa OX=9823 GN=ANGEL2 PE=4 SV=2 CANONICAL=A0A287B2R2-1" }, "locus": { "chromosome": "9", "start_pos": 130471095, "end_pos": 130457032, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049420.3", "url": "https://www.ensembl.org/id/ENSSSCT00000049420.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045354.2", "url": "https://www.ensembl.org/id/ENSSSCP00000045354.2" } ] } }, { "isoform_ac": "A0A287B2R2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B2R2/entry", "sequence": { "sequence": "MEAWRCVRRGYGRCVVGRGRYPMLPHHQKSLGRDWTTPWENLQRCCWNRHISSCMRWPGHYSRAPYPYFSSRHFSLNWKPPCLFESRTQFQSWNWRPDNLSQTSLIHLSSYIMNSEGDEPSSKRRKHQGTIKRHWEYMCNHNKEKTKILGEKNGDPVCDNSENKFDFSVMSYNILSQDLLEDNSHLYRHCRQPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGTEIRPSLESLGYHCEYKMRTGKKPDGCAICFKHSKFSLLSVNPVEFFRPNVPLLDRDNVGLVLLLQPKSPSAASPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSVAHQKDGSFCPIVICGDFNSVPGSPLYSFIKEGKLNYEGLAIGKVSGQEQSSRGQRILSIPIWPPNLGISQNCVYEVQQVPKVEKTGSDLTQTQVDKTEVLVTDEKLSSNLQHHFSLSSVYSHYFPETGIPEVTTCHSRSAITVDYIFYSAEKEGVAGQQGAGVALVGGLKLLARLSLLTEQDLWTVNGLPNENNSSDHLPLLAKFRLDL", "length": 544, "header": "tr|A0A287B2R2-1|A0A287B2R2_PIG Isoform 1 of Angel homolog 2 OS=Sus scrofa OX=9823 GN=ANGEL2 PE=4 SV=1 CANONICAL=A0A287B2R2-1" }, "locus": { "chromosome": "9", "start_pos": 130471095, "end_pos": 130454117, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042646.2", "url": "https://www.ensembl.org/id/ENSSSCT00000042646.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050701.1", "url": "https://www.ensembl.org/id/ENSSSCP00000050701.1" } ] } }, { "isoform_ac": "A0A287BDZ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BDZ0/entry", "sequence": { "sequence": "MEGTIKRHWEYMCNHNKEKTKILGEKNGDPVCDNSENKFDFSVMSYNILSQDLLEDNSHLYRHCRQPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGTEIRPSLESLGYHCEYKMRTGKKPDGCAICFKHSKFSLLSVNPVEFFRPNVPLLDRDNVGLVLLLQPKSPSAASPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSVAHQKDGSFCPIVICGDFNSVPGSPLYSFIKEGKLNYEGLAIGKVSGQEQSSRGQRILSIPIWPPNLGISQNCVYEVQQVPKVEKTGSDLTQTQVDKTEVLVTDEKLSSNLQHHFSLSSVYSHYFPETGIPEVTTCHSRSAITVDYIFYSAEKEGVAGQQGAGVALVGGLKLLARLSLLTEQDLWTVNGLPNENNSSDHLPLLAKFRLDL", "length": 418, "header": "tr|A0A287BDZ0-1|A0A287BDZ0_PIG Computationally mapped isoform of Angel homolog 2 OS=Sus scrofa OX=9823 GN=ANGEL2 PE=4 SV=2 CANONICAL=A0A287B2R2-1" }, "locus": { "chromosome": "9", "start_pos": 130471095, "end_pos": 130458801, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038645.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038645.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054312.2", "url": "https://www.ensembl.org/id/ENSSSCP00000054312.2" } ] } }, { "isoform_ac": "F1S2X8-1", "url": "https://www.uniprot.org/uniprotkb/F1S2X8/entry", "sequence": { "sequence": "MGSTALYPMLPHHQKSLGRDWTTPWENLQRCCWNRHISSCMRWPGHYSRAPYPYFSSRHFSLNWKPPCLFESRTQFQSWNWRPDNLSQTSLIHLSSYIMNSEGDEPSSKRRKHQGTIKRHWEYMCNHNKEKTKILGEKNGDPVCDNSENKFDFSVMSYNILSQDLLEDNSHLYRHCRQPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGTEIRPSLESLGYHCEYKMRTGKKPDGCAICFKHSKFSLLSVNPVEFFRPNVPLLDRDNVGLVLLLQPKSPSAASPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSVAHQKDGSFCPIVICGDFNSVPGSPLYSFIKEGKLNYEGLAIGKVSGQEQSSRGQRILSIPIWPPNLGISQNCVYEVQQVPKVEKTGSDLTQTQVDKTEVLVTDEKLSSNLQHHFSLSSVYSHYFPETGIPEVTTCHSRSAITVDYIFYSAEKEGVAGQQGAGVALVGGLKLLARLSLLTEQDLWTVNGLPNENNSSDHLPLLAKFRLDL", "length": 530, "header": "tr|F1S2X8-1|A0A287B2R2_PIG Computationally mapped isoform of Angel homolog 2 OS=Sus scrofa OX=9823 GN=ANGEL2 PE=4 SV=4 CANONICAL=A0A287B2R2-1" }, "locus": { "chromosome": "9", "start_pos": 130471095, "end_pos": 130455027, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016981.4", "url": "https://www.ensembl.org/id/ENSSSCT00000016981.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016527.4", "url": "https://www.ensembl.org/id/ENSSSCP00000016527.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S2X8", "url": "https://www.uniprot.org/uniprotkb/F1S2X8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100523200", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100523200", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Z9L6-1", "protein_name": "Angel homolog 2", "gene_name": "ANGEL2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MHHLPPARIPHIKAGGPQPRWRLRPHPSLAQHGGPASARAPPEPRWRRDAGRPLDYKSHGRAGERAWPSHRPRGVSGGQGVWRRQAELALPWNDPFWGRQVLAEQLAGPRGAGPGPGLAGRRPMLPRHVQRLGRDWITHVNGSQVFAFSSPVPTCMRWAGHCPWAPFPLPVPVDFSANWRLPLFFGPWRQFQNSNWQLDNFAQNSCIHLPNPSMKAEGEEPVTKKRRLSAQPDSPAPEEVNFSEQKEALCVSVSQDEKSESNKKVNIKRHWEYFCQHSRTMKILESTETDQSNRECEARFDFTVMSYNILSQNLLEDNSHLYKHCRQRLLIWTYRFPNILQEIKQLDADVLCLQEVQEDHYRKEIKSSLESLGYHCEYKMRTGRKSDGCAICFKTSKFSLISSNPVEFFRRDIPLLDRDNVGLVLLLQPKFPCKTNAAICIANTHLLYNPRRGDIKLTQLAMLLAEIASVAPQKNGSFCPIVMCGDFNSVPGSPLYRFIKEGKLNYEGLAIGKVSGQEQFPRGQRILSIPIWPKKLGISQNCVYEIKQQQKEDDAGEKTEGATSDNTKEIVIASEKLSSKLQHHFKLSSVYSHYFPETGLPEVTTCHSRSAVTVDYIFYSAANDDSVAQPGMEDSLHGGLKLLGRLALLTEKDLWTVNGLPNENNSSDHLPLLAEFRLIER", "length": 681 }, "evidence": [ { "id": "A0A287B2R2", "url": "https://omabrowser.org/oma/group/A0A287B2R2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A6H7I3-1", "protein_name": "RNA 2',3'-cyclic phosphatase ANGEL2", "gene_name": "ANGEL2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEAWRCVRRGYGRCVVGRGRYPMLPHHQKSLGRDWTTPWENLQKCCWNRHISSCMRWPGHYSRAPYPYFSSRHFSLNWRPPGLFESRAPFQYWNWRPDSLSQTSLFHLSSYIMNSEGDEPSSKRRKHQGTIQRHWEYICNHNKENTKILGDENVDPICEDSENKFEFSVMSYNILSQDLLEDNSHLYKHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGTEIRPSLESLGYHCEYKMRTGRKPDGCAICFKHSKFSLLSVNPVEFYRRDVPLLDRDNVGLVLLLQPKIPSATSPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSVAHQKDGRFCPIVMCGDFNSVPGSPLYSFIKEGKLNYEGLAIGKVSGQEQSSRGQRILSIPIWPPNLGISQNCVYEVQQVPKVEKPDGDLTQPELDKTEVLVTAEKLSSNLQHHFSLSSVYSHYLPDTGIPEVTTCHSRSAVTVDYIFYSAEKEGVAEQPGAEVALVGGLKLLARLSLLTEQDLWTVNGLPNENNSSDHLPLLAKFRLEL", "length": 544 }, "evidence": [ { "id": "A0A287B2R2", "url": "https://omabrowser.org/oma/group/A0A287B2R2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F1LT13-1", "protein_name": "Angel homolog 2", "gene_name": "Angel2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METWRCVRRGYGRCVAGRGRYSMLPYPLKSLGRDWTTPWEDLQKYCWRRHISSCLRWPGHYSRAPYPYFSSRHFSLNCRPPFLFESGTQFQYYNWRPDQLSNTSLFHLSRYVMNSDRDEPSSKRRKHQGTIKRSWEYLCSHNKEKTKDLEDRNGDSTCEDCEDKFDFSVMSYNILSQELLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGTEIRPSLESLGYHCEYKMKTGRKPDGCAICFKHSKFSLLSVNPVEFCRRDIPLLDRDNIGLVLLLQPKIPRAASPSICIANTHLLYNPRRGDIKLTQLAMLLAEISNVAHQKDGSFCPIVMCGDFNSVPGSPLYSFIKEGKLNYEGLAIGKVSGQEQSSRGQRILSIPIWPPNLGISQNCVYEAQQVPKVEKTDSDVTQAQQEKAEVPVPADKVSSHLQHGFSLSSVYSHYVPDTGVPEVTTCHSRSAITVDYIFYSAEKDDTARGPGAEVALVGGLKLLARLSLLTEQDLWTVNGLPNEHNSSDHLPLLAKFRLEL", "length": 544 }, "evidence": [ { "id": "A0A287B2R2", "url": "https://omabrowser.org/oma/group/A0A287B2R2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5RGT6-1", "protein_name": "RNA 2',3'-cyclic phosphatase angel2", "gene_name": "angel2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRKGRHMPRHTNANYARPGVSPNHPMFGRYLSTVGFPPAQNVYNHWRHWYQPGHLWWTQPPQLQHPSSSFSTVRHPFNRPPRPPDPYQWSSWRQTGVLPHTRGLHLSAGLMESTDRPPPQKRRKSAEGEISQRSPQHSPPKGSRSPKGSPEWLRNVSSIEVANRTSAVPELKRHWEDLSHLCKAAPSVNRGKQKWPFDFSVMSYNILSQDLLCDNTYLYRHCNPPVLDWRNRFPNIIKELEQYSADIMCLQEVQEDHYKQQIKPSLESLGYHCEFKRRTGLKPDGCAVIFKRERFSLVSCHPVEYFRRGVPLMDRDNVGLIVLLRPIDPHVSLSNICVANTHLLYNPRRGDIKLAQLAMLLAEISRVSQLPDSSVCPVLLCGDFNSVPWSPLYRFIKDRRLDYDGMPIGKVSGQEETPRGQRILTVPIWPRSLGISQQCQYENQTRDSELRDLEQTERESFTEASIEHCLRLTSAYSHHLKESGQPEITTCHSRTAITVDYIFYSAALGDVMAQAEYSAPPERGLQLLGRLALVGEKELQKVNGLPNQHNSSDHLPLLTRFRLHPQADS", "length": 569 }, "evidence": [ { "id": "A0A287B2R2", "url": "https://omabrowser.org/oma/group/A0A287B2R2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5VTE6-1", "protein_name": "RNA 2',3'-cyclic phosphatase ANGEL2", "gene_name": "ANGEL2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEAWRCVRKGYGHCVVGRGRYPMFPHHSRSLGRDWTTPWENLQRCCWNRHISSCMRWPGHYSRAPYPYFSSRHFSLNWRPPCLFESRTQFQYCNWRPDNLSQTSLIHLSSYVMNAEGDEPSSKRRKHQGVIKRNWEYICSHDKEKTKILGDKNVDPKCEDSENKFDFSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAICFKHSKFSLLSVNPVEFFRPDISLLDRDNVGLVLLLQPKIPYAACPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSVAHQKDGSFCPIVMCGDFNSVPGSPLYSFIKEGKLNYEGLPIGKVSGQEQSSRGQRILSIPIWPPNLGISQNCVYEVQQVPKVEKTDSDLTQTQLKQTEVLVTAEKLSSNLQHHFSLSSVYSHYFPDTGIPEVTTCHSRSAITVDYIFYSAEKEDVAGHPGAEVALVGGLKLLARLSLLTEQDLWTVNGLPNENNSSDHLPLLAKFRLEL", "length": 544 }, "evidence": [ { "id": "A0A287B2R2", "url": "https://omabrowser.org/oma/group/A0A287B2R2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8K1C0-1", "protein_name": "RNA 2',3'-cyclic phosphatase ANGEL2", "gene_name": "Angel2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METWRCVRRGYGRCVAGRGRYSMFPYPLKSLGRDWTTPWEDLQKYCWRRHISSCLRWPGHYSRAPYPYFSSRHFSLNCRPPFLFESGTQFQYYNWRSDHLSNASLIHLSRHVMTSDRDEPLSKRRKHQGTIKRNWEYLCSHNKENTKDLEDRNVDSTCEDREDKFDFSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGTEIRPSLESLGYHCEYKMKTGRKPDGCAICFKHSRFSLLSVNPVEFCRRDIPLLDRDNIGLVLLLQPKIPRAASPSICIANTHLLYNPRRGDIKLTQLAMLLAEIANVTHRKDGSSCPIVMCGDFNSVPGSPLYSFIKEGKLNYEGLAIGKVSGQEQSSRGQRILSIPIWPPNLGISQNCVYEAQQVPKVEKTDSDVTQAQQEKAEVPVSADKVSSHLQHGFSLSSVYSHYVPDTGVPEVTTCHSRSAITVDYIFYTAKKENTAQGPGAEVALVGGLKLLARLSLLTEQDLWTVNGLPNEHNSSDHLPLLAKFRLEL", "length": 544 }, "evidence": [ { "id": "A0A287B2R2", "url": "https://omabrowser.org/oma/group/A0A287B2R2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "catalytic activity", "id": "GO:0003824", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003824", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2R2", "url": "https://www.uniprot.org/uniprotkb/A0A287B2R2" } ], "pmid": "" }, { "name": "magnesium ion binding", "id": "GO:0000287", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000287", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2R2", "url": "https://www.uniprot.org/uniprotkb/A0A287B2R2" } ], "pmid": "" }, { "name": "mRNA 3'-UTR binding", "id": "GO:0003730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003730", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2R2", "url": "https://www.uniprot.org/uniprotkb/A0A287B2R2" } ], "pmid": "" }, { "name": "RNA 2'-phosphatase activity", "id": "GO:0160273", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0160273", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2R2", "url": "https://www.uniprot.org/uniprotkb/A0A287B2R2" } ], "pmid": "" }, { "name": "RNA 2',3'-cyclic phosphatase activity", "id": "GO:0160272", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0160272", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2R2", "url": "https://www.uniprot.org/uniprotkb/A0A287B2R2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "mitochondrial matrix", "id": "GO:0005759", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005759", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2R2", "url": "https://www.uniprot.org/uniprotkb/A0A287B2R2" } ], "pmid": "" }, { "name": "Cajal body", "id": "GO:0015030", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015030", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2R2", "url": "https://www.uniprot.org/uniprotkb/A0A287B2R2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "negative regulation of mitotic cell cycle", "id": "GO:0045930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045930", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2R2", "url": "https://www.uniprot.org/uniprotkb/A0A287B2R2" } ], "pmid": "" }, { "name": "3'-UTR-mediated mRNA stabilization", "id": "GO:0070935", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070935", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2R2", "url": "https://www.uniprot.org/uniprotkb/A0A287B2R2" } ], "pmid": "" }, { "name": "negative regulation of RNA splicing", "id": "GO:0033119", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033119", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2R2", "url": "https://www.uniprot.org/uniprotkb/A0A287B2R2" } ], "pmid": "" }, { "name": "mitochondrial mRNA 3'-end processing", "id": "GO:0090616", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090616", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2R2", "url": "https://www.uniprot.org/uniprotkb/A0A287B2R2" } ], "pmid": "" }, { "name": "negative regulation of tRNA processing", "id": "GO:2000236", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000236", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2R2", "url": "https://www.uniprot.org/uniprotkb/A0A287B2R2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], 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"https://www.uniprot.org/uniprotkb/A0A287B2R2" }, { "id": "PF19339", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19339" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Protein angel homolog 2 N-terminal", "eco_id": "ECO_0000259", "start_pos": 23, "end_pos": 129, "start_aa": "Met", "end_aa": "Gly", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 528, "end_pos": 530 }, { "start_pos": 529, "end_pos": 531 }, { "start_pos": 99, "end_pos": 101 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"yes" } }, { "uniprot_canonical_ac": "A0A287B4D3-1", "uniprot_ac": "A0A287B4D3", "uniprot_id": "A0A287B4D3_PIG", "mass": { "chemical_mass": 194073.0, "monoisotopic_mass": 194073.0 }, "refseq": {}, "gene_names": [ { "name": "TOGARAM1", "type": "recommended", "evidence": [ { "id": "A0A287B4D3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B4D3" } ] } ], "protein_names": [ { "name": "TOG array regulator of axonemal microtubules protein 1", "type": "recommended", "evidence": [ { "id": "A0A287B4D3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B4D3/entry#names_and_taxonomy" } ] }, { "name": "Crescerin-1", "type": "synonym", "evidence": [ { "id": "A0A287B4D3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B4D3/entry#names_and_taxonomy" } ] }, { "name": "Protein FAM179B", "type": "synonym", "evidence": [ { "id": "A0A287B4D3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B4D3/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Involved in ciliogenesis. It is required for appropriate acetylation and polyglutamylation of ciliary microtubules, and regulation of cilium length. Interacts with microtubules and promotes microtubule polymerization via its HEAT repeat domains, especially those in TOG region 2 and 4.", "evidence": [ { "database": "UniProtKB", "id": "A0A287ANF4", "url": "https://www.uniprot.org/uniprotkb/A0A287ANF4#function" }, { "database": "UniProtKB", "id": "ARBA00057468", "url": "https://www.uniprot.org/uniprotkb/ARBA00057468#function" }, { "database": "UniProtKB", "id": "A0A287B4D3", "url": "https://www.uniprot.org/uniprotkb/A0A287B4D3#function" }, { "database": "UniProtKB", "id": "A0A287BHG3", "url": "https://www.uniprot.org/uniprotkb/A0A287BHG3#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B4D3", "url": "https://www.uniprot.org/uniprotkb/A0A287B4D3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TOGARAM1", "url": "https://www.uniprot.org/uniprotkb/A0A287B4D3", "locus": { "chromosome": "1", "start_pos": 175275159, "end_pos": 175198385, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000027765", "url": "https://www.ensembl.org/id/ENSSSCG00000027765" } ] } } ], "crossref": [ { "id": "ENSSSCG00000027765", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000027765", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR011989", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011989", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR034085", "url": "https://www.ebi.ac.uk/interpro/entry/IPR034085", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR21567", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21567", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21567:SF6", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21567:SF6", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "A0A287ANF4", "url": "https://www.uniprot.org/uniprotkb/A0A287ANF4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ANF4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ANF4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B4D3", "url": "https://www.uniprot.org/uniprotkb/A0A287B4D3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B4D3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B4D3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BHG3", "url": "https://www.uniprot.org/uniprotkb/A0A287BHG3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BHG3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BHG3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAAPSALHPLPPLPALGASRLQSRSRPSASETDDSLRGGAMRGEKNYCRGAAGDHGSCSPTPSPLASALLMPAEAVSSSWSGSGGGLSGGDEEETRLLQLLRTAPDPSEAFQALQAALPRRGCRLGFPRRKEALYRALGRVLVEGGSDEKRLCLQFLLDILRGQGEAGQLEEAFSLALLPQLVVSLREENPALRKDALQILHICLKRSSGQVLRTLIQQGLESTDSRLRASTALLFPILLTPEDLLLGLDLTEVIISLARKLGSQEIEEESETAFSALQQIGERLGQERFQSYISRLPSALRRHYNRRLETHFGSQVPYYLELEASGLPEDPLPCAVTISNSNLKFGIIPQELHSRLLDQEDYKNRTQAVEELKQVMGRFNPSSTPYSSLVGFVSLLYNLLDDSNFKVVHGTLQVLHLLVIRLGEQVQQFLGPVIAASVKVLADNKLVIKQEYMKIFLKLMKEVGPQQVLCLLLEHLKHKHSRVREEVVNICICSLLTYPSEDFDLSKLSFDLAPALVDSKRRVRQAALEAFAVLASSMGSGKTSILFKAVDTVELQDNGDGVMNAVQARLARKTLPRLTEQGFVEYAILMPSSAQGRSNHLAHGADTDWLLAGNRTQSAHCHCGDHTRDSMQIYGSYSPTICTRRVLSAGKGKNKLPWENEQPGVTGENQTSNSKDIDQFSACDFIPSPKLKPSQGMPVSDDVCFSRKRVSRNLFQNSREFNPDSLPICAAGPTGTHQTDLSGKCGQLGFSQICGKTGSMDSDLQYLGTTNSHQDKVYASLNSVSKTQQTFDSQTERTSSYSGPNPNPGAFILPSYPLSSPRTSPKHTSLTVSPKKSQDNSVNFSNSWPLKSFEGLSKPSPQKKLVSQKSSDPTGENSQEKPSPVQLTPALVRSPSSRRGLNGTKPVPPIPRGISLLPDKADLITVGPKKKEPDDIWRSEKDSLTIDLSELNVRDKDLDQEEMQSSLRSLRNSAAKKRAKLSGSTSDLESPDSAIKLDLTVDSPSRSSSPNISSYSESGVYSQESLTSSLSTTPQGKRIMSDVFPTFGSKPCPTRLSSAKNKNSQIAEQSPGAGSSSNFQQISSFDLISTNTLSEDSVVVVGKGVFGSPNSAPAACSQSVISSVENRDTFSIKSIEPPSGIYGRAVQQSIPSYVDVENEKDIKVSISKSTYDKMRQKRKEEKELFDIKDCEKKEQNHWEQMKHTGTEKIVSENETSPGAIPQYKERMPSVTHSPEIMDSSELRPFSKPEVALIEALRLLADEDWEKKIEGLNFIRCLAVFHSEILNTKLHETNFAVVQEVKNLRSGVSRAAVMCLSDLFTYLKKGMDQELDNTVKVLLHKSGESNTFIREDVDKALRAMITSVTPARAVVSLINGGQSHLHIAVRRCAAQHLSDVVEFMEPERILSGTKDMAERILPAAAKFAQDSSPETRYYGRKMLFLMMCHPNFDKMLEKYVPSKDLPYIKESIKSLRQKGLGEIPLDPPSAKGRRSHTGSVGNTRSSTVYRDAFSSAEREVTEIREFTRKSVPRNSSESAEYIKVITGLLNAKDFRDRINGIKQLLSDTENNQELVVGNIVKIFDAFKSRLHDSNSKVNLVALETMHKMIPLIRDNLSPIINMLIPAIVDNNLNSKNPGIYAAATNVIQALIQHVDNYLLLQPFCTKAQFLNGKAKQDMTEKLADIVTELYQRKPHATEQKVLVVLWHLLGNMTNSGSLPGAGGNIRAATAKLSKVLFTQMGQNLLNQAASQPSHIKKSLEELLDMTI", "length": 1764, "header": "tr|A0A287B4D3-1|A0A287B4D3_PIG Isoform 1 of TOG array regulator of axonemal microtubules protein 1 OS=Sus scrofa OX=9823 GN=TOGARAM1 PE=3 SV=2 CANONICAL=A0A287B4D3-1" }, "isoforms": [ { "isoform_ac": "A0A287ANF4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ANF4/entry", "sequence": { "sequence": 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"length": 1832, "header": "tr|A0A287ANF4-1|A0A287B4D3_PIG Computationally mapped isoform of TOG array regulator of axonemal microtubules protein 1 OS=Sus scrofa OX=9823 GN=TOGARAM1 PE=3 SV=3 CANONICAL=A0A287B4D3-1" }, "locus": { "chromosome": "1", "start_pos": 175273422, "end_pos": 175198603, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039813.3", "url": "https://www.ensembl.org/id/ENSSSCT00000039813.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045456.3", "url": "https://www.ensembl.org/id/ENSSSCP00000045456.3" } ] } }, { "isoform_ac": "A0A287B4D3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B4D3/entry", "sequence": { "sequence": 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"length": 1764, "header": "tr|A0A287B4D3-1|A0A287B4D3_PIG Isoform 1 of TOG array regulator of axonemal microtubules protein 1 OS=Sus scrofa OX=9823 GN=TOGARAM1 PE=3 SV=2 CANONICAL=A0A287B4D3-1" }, "locus": { "chromosome": "1", "start_pos": 175273422, "end_pos": 175198603, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037091.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037091.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051144.2", "url": "https://www.ensembl.org/id/ENSSSCP00000051144.2" } ] } }, { "isoform_ac": "A0A287BHG3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BHG3/entry", "sequence": { "sequence": "MAAAPSALHPLPPLPALGASRLQSRSRPSASETDDSLRGGAMRGEKNYCRGAAGDHGSCSPTPSPLASALLMPAEAVSSSWSGSGGGLSGGDEEETRLLQLLRTAPDPSEAFQALQAALPRRGCRLGFPRRKEALYRALGRVLVEGGSDEKRLCLQFLLDILRGQGEAGQLEEAFSLALLPQLVVSLREENPALRKDALQILHICLKRSSGQVLRTLIQQGLESTDSRLRASTALLFPILLTPEDLLLGLDLTEVIISLARKLGSQEIEEESETAFSALQQIGERLGQERFQSYISRLPSALRRHYNRRLETHFGSQVPYYLELEASGLPEDPLPCAVTISNSNLKFGIIPQELHSRLLDQEDYKNRTQAVEELKQVMGRFNPSSTPYSSLVGFVSLLYNLLDDSNFKVVHGTLQVLHLLVIRLGEQVQQFLGPVIAASVKVLADNKLVIKQEYMKIFLKLMKEVGPQQVLCLLLEHLKHKHSRVREEVVNICICSLLTYPSEDFDLSKLSFDLAPALVDSKRRVRQAALEAFAVLASSMGSGKTSILFKAVDTVELQDNGDGVMNAVQARLARKTLPRLTEQGFVEYAILMPSSAQGRSNHLAHGADTDWLLAGNRTQSAHCHCGDHTRDSMQIYGSYSPTICTRRVLSAGKGKNKLPWENEQPGVTGENQTSNSKDIDQFSACDFIPSPKLKPSQGMPVSDDVCFSRKRVSRNLFQNSREFNPDSLPICAAGPTGTHQTDLSGKCGQLGFSQICGKTGSMDSDLQYLGTTNSHQDKVYASLNSVSKTQQTFDSQTERTSSYSGPNPNPGAFILPSYPLSSPRTSPKHTSLTVSPKKSQDNSVNFSNSWPLKSFEGLSKPSPQKKLVSQKSSDPTGENSQEKPSPVQLTPALVRSPSSRRGLNGTKPVPPIPRGISLLPDKADLITVGPKKKEPDDIWRSEKDSLTIDLSELNVRDKDLDQEEMQSSLRSLRNSAAKKRAKLSGSTSDLESPDSAIKLDLTVDSPSRSSSPNISSYSESGVYSQESLTSSLSTTPQGKRIMSDVFPTFGSKPCPTRLSSAKNKNSQIAEQSPGAGSSSNFQQISSFDLISTNTLSEDSVVVVGKGVFGSPNSAPAACSQSVISSVENRDTFSIKSIEPPSGIYGRAVQQSIPSYVDVENEKDIKVSISKSTYDKMRQKRKEEKELFDIKDCEKKEQNHWEQMKHTGTEKIVSENETSPGAIPQYKERMPSVTHSPEIMDSSELRPFSKPEVALIEALRLLADEDWEKKIEGLNFIRCLAVFHSEILNTKLHETNFAVVQEVKNLRSGVSRAAVMCLSDLFTYLKKGMDQELDNTVKVLLHKSGESNTFIREDVDKALRAMITSVTPARAVVSLINGGQRYYGRKMLFLMMCHPNFDKMLEKYVPSKDLPYIKESIKSLRQKGLGEIPLDPPSAKGRRSHTGSVGNTRSSTVYRDAFSSAEREVTEIREFTRKSVPRNSSESAEYIKVITGLLNAKDFRDRINGIKQLLSDTENNQELVVGNIVKIFDAFKSRLHDSNSKVNLVALETMHKMIPLIRDNLSPIINMLIPAIVDNNLNSKNPGIYAAATNVIQALIQHVDNYLLLQPFCTKAQFLNGKAKQDMTEKLADIVTELYQRKPHATEQKVLVVLWHLLGNMTNSGSLPGAGGNIRAATAKLSKVLFTQMGQNLLNQAASQPSHIKKSLEELLDMTI", "length": 1711, "header": "tr|A0A287BHG3-1|A0A287BHG3_PIG Computationally mapped isoform of TOG array regulator of axonemal microtubules protein 1 OS=Sus scrofa OX=9823 GN=TOGARAM1 PE=3 SV=2 CANONICAL=A0A287B4D3-1" }, "locus": { "chromosome": "1", "start_pos": 175273422, "end_pos": 175198603, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042534.3", "url": "https://www.ensembl.org/id/ENSSSCT00000042534.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055570.2", "url": "https://www.ensembl.org/id/ENSSSCP00000055570.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 62, "start_aa": "Thr", "end_pos": 62, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr62", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 736, "start_aa": "Thr", "end_pos": 736, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr736", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287ANF4", "url": "https://www.uniprot.org/uniprotkb/A0A287ANF4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cilium", "id": "GO:0005929", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005929", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4D3", "url": "https://www.uniprot.org/uniprotkb/A0A287B4D3" } ], "pmid": "" }, { "name": "axoneme", "id": "GO:0005930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005930", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4D3", "url": "https://www.uniprot.org/uniprotkb/A0A287B4D3" } ], "pmid": "" }, { "name": "cytoplasmic microtubule", "id": "GO:0005881", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005881", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4D3", "url": "https://www.uniprot.org/uniprotkb/A0A287B4D3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4D3", "url": "https://www.uniprot.org/uniprotkb/A0A287B4D3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "microtubule cytoskeleton organization", "id": "GO:0000226", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000226", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4D3", "url": "https://www.uniprot.org/uniprotkb/A0A287B4D3" } ], "pmid": "" }, { "name": "cell projection organization", "id": "GO:0030030", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030030", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4D3", "url": "https://www.uniprot.org/uniprotkb/A0A287B4D3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1013, "end_pos": 1015, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1215, "end_pos": 1217, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1531, "end_pos": 1533, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1612, "end_pos": 1614, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1708, "end_pos": 1710, "annotation": "n_glycosylation_sequon" }, { "start_pos": 366, "end_pos": 368, "annotation": "n_glycosylation_sequon" }, { "start_pos": 616, "end_pos": 618, "annotation": "n_glycosylation_sequon" }, { "start_pos": 671, "end_pos": 673, "annotation": "n_glycosylation_sequon" }, { "start_pos": 845, "end_pos": 847, "annotation": "n_glycosylation_sequon" }, { "start_pos": 904, "end_pos": 906, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287B4D3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B4D3" }, { "id": "SM01349", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM01349" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "TOG", "eco_id": "ECO_0000259", "start_pos": 339, "end_pos": 574, "start_aa": "Thr", "end_aa": "Arg", "glycosite_overlap": [] } ], "binding_sites": [], 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"sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QM15-1", "uniprot_ac": "A0A5G2QM15", "uniprot_id": "A0A5G2QM15_PIG", "mass": { "chemical_mass": 57718.0, "monoisotopic_mass": 57718.0 }, "refseq": { "ac": "XP_020935357", "name": "membrane-bound transcription factor site-2 protease isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020935357" }, "gene_names": [ { "name": "MBTPS2", "type": "synonym", "evidence": [ { "id": "XP_020935357", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020935357" } ] } ], "protein_names": [ { "name": "Membrane-bound transcription factor site-2 protease", "type": "recommended", "evidence": [ { "id": "A0A5G2QM15", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM15/entry#names_and_taxonomy" } ] }, { "name": "3.4.24.85", "type": "synonym", "evidence": [ { "id": "A0A5G2QM15", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM15/entry#names_and_taxonomy" } ] }, { "name": "Endopeptidase S2P", "type": "synonym", "evidence": [ { "id": "A0A5G2QM15", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM15/entry#names_and_taxonomy" } ] }, { "name": "membrane-bound transcription factor site-2 protease isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020935357", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020935357" } ] } ], "function": [ { "annotation": "Zinc metalloprotease that mediates intramembrane proteolysis of proteins such as ATF6, ATF6B, SREBF1/SREBP1 and SREBF2/SREBP2. Catalyzes the second step in the proteolytic activation of the sterol regulatory element-binding proteins (SREBPs) SREBF1/SREBP1 and SREBF2/SREBP2: cleaves SREBPs within the first transmembrane segment, thereby releasing the N-terminal segment with a portion of the transmembrane segment attached. Mature N-terminal SREBP fragments shuttle to the nucleus and activate gene transcription. Also mediates the second step in the proteolytic activation of the cyclic AMP-dependent transcription factor ATF-6 (ATF6 and ATF6B). Involved in intramembrane proteolysis during bone formation. In astrocytes and osteoblasts, upon DNA damage and ER stress, mediates the second step of the regulated intramembrane proteolytic activation of the transcription factor CREB3L1, leading to the inhibition of cell-cycle progression.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QH14", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QH14#function" }, { "database": "UniProtKB", "id": "ARBA00045828", "url": "https://www.uniprot.org/uniprotkb/ARBA00045828#function" }, { "database": "UniProtKB", "id": "A0A5G2QM15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM15#function" }, { "database": "UniProtKB", "id": "A0A5G2QWX7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWX7#function" }, { "database": "UniProtKB", "id": "A0A5G2R2K9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2K9#function" }, { "database": "UniProtKB", "id": "K7GQR3", "url": "https://www.uniprot.org/uniprotkb/K7GQR3#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM15" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM15", "locus": {} } ], "crossref": [ { "id": "ENSSSCG00000012165", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000012165", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd06162", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06162", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd06775", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06775", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "102165056", "url": "https://www.ncbi.nlm.nih.gov/gene/102165056", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001193", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001193", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008915", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008915", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036034", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036034", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:102165056", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102165056", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FYSWGRW", "url": "https://omabrowser.org/oma/group/FYSWGRW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QWX7", "url": "https://www.orthodb.org/?gene=A0A5G2QWX7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13325", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13325", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13325:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13325:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02163", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02163", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-1655829", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1655829", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-381033", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-381033", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8874177", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8874177", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8874211", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8874211", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020935357", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020935357", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QH14", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QH14", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QH14-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QH14-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QM15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM15", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QM15-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM15-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QWX7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWX7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QWX7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWX7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2K9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2K9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2K9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2K9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7GQR3", "url": "https://www.uniprot.org/uniprotkb/K7GQR3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7GQR3-1", "url": "https://www.uniprot.org/uniprotkb/K7GQR3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MIPVSLVVVVVGGWTAVYLTDLVLKSSVYFKHSYEDWLENNGLSISPFHIRWQTAVFNRAFYSWGRRKARMLYQWFNFGMVFGVIAMFSSFFLLGRTLMQTLSQMMVDSPSYSSSSSSSSSLSSSSSSSSSSSSSSSSSLHNEQVLQVVVPGINLPVSQLTYFFAAVLISGVVHEIGHGIAAIREQVRFNGFGIFLFIIYPGAFVDLFTTHLQLISPVQQLRIFCAGIWHNFVLALLGILALVLLPVILLPFYYTGVGVLITEVAEDSPAIGPRGLFVGDLVTHLQDCPVTNVQDWNECLDTIAYEPQIGYCISASTLQQLSFPVRAYKRLDGSTECCNNHSLTDVCFSYRNNFNKRLHTCLPARKAVEATQVCRTNKDCKKSSSSSFCIIPSLETHTRLIKVKHPPQIDMLYVGHPLHLHYTVSITSFIPRFNFLSIDLPVVVETFVKYLISLSGALAIVNAVPCFALDGQWILNSFLDATLTSVIGDNDVKDLIGFFILLGGSVLLAANVTLGLWMVTAR", "length": 522, "header": "tr|A0A5G2QM15-1|A0A5G2QM15_PIG Isoform 1 of Membrane-bound transcription factor site-2 protease OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A5G2QM15-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QH14-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QH14/entry", "sequence": { "sequence": "MIPVSLVVVVVGGWTAVYLTDLVLKSSVYFKHSYEDWLENNGLSISPFHIRWQTAVFNRAFYSWGRRKARMLYQWFNFGMVFGVIAMFSSFFLLGRTLMQTLSQMMVDSPSYSSSSSSSSSLSSSSSSSSSSSSSSSSSLHNEQVLQVVVPGINLPVSQLTYFFAAVLISGVVHEIGHGIAAIREQVRFNGFGIFLFIIYPGAFVDLFTTHLQLISPVQQLRIFCAAYKRLDGSTECCNNHSLTDVCFSYRNNFNKRLHTCLPARKAVEATQVCRTNKDCKKSSSSSFCIIPSLETHTRLIKVKHPPQIDMLYVGHPLHLHYTVSITSFIPRFNFLSIDLPVVVETFVKYLISLSGALAIVNAVPCFALDGQWILNSFLDATLTSVIGDNDVKDLIGFFILLGGSVLLAANVTLGLWMVTAR", "length": 422, "header": "tr|A0A5G2QH14-1|A0A5G2QH14_PIG Computationally mapped isoform of Membrane-bound transcription factor site-2 protease OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=A0A5G2QM15-1" }, "locus": { "chromosome": "X", "start_pos": 18051450, "end_pos": 18014033, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080854.1", "url": "https://www.ensembl.org/id/ENSSSCT00000080854.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063614.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063614.1" } ] } }, { "isoform_ac": "A0A5G2QM15-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM15/entry", "sequence": { "sequence": "MIPVSLVVVVVGGWTAVYLTDLVLKSSVYFKHSYEDWLENNGLSISPFHIRWQTAVFNRAFYSWGRRKARMLYQWFNFGMVFGVIAMFSSFFLLGRTLMQTLSQMMVDSPSYSSSSSSSSSLSSSSSSSSSSSSSSSSSLHNEQVLQVVVPGINLPVSQLTYFFAAVLISGVVHEIGHGIAAIREQVRFNGFGIFLFIIYPGAFVDLFTTHLQLISPVQQLRIFCAGIWHNFVLALLGILALVLLPVILLPFYYTGVGVLITEVAEDSPAIGPRGLFVGDLVTHLQDCPVTNVQDWNECLDTIAYEPQIGYCISASTLQQLSFPVRAYKRLDGSTECCNNHSLTDVCFSYRNNFNKRLHTCLPARKAVEATQVCRTNKDCKKSSSSSFCIIPSLETHTRLIKVKHPPQIDMLYVGHPLHLHYTVSITSFIPRFNFLSIDLPVVVETFVKYLISLSGALAIVNAVPCFALDGQWILNSFLDATLTSVIGDNDVKDLIGFFILLGGSVLLAANVTLGLWMVTAR", "length": 522, "header": "tr|A0A5G2QM15-1|A0A5G2QM15_PIG Isoform 1 of Membrane-bound transcription factor site-2 protease OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A5G2QM15-1" }, "locus": { "chromosome": "X", "start_pos": 18051450, "end_pos": 18014033, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080842.2", "url": "https://www.ensembl.org/id/ENSSSCT00000080842.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065633.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065633.1" } ] } }, { "isoform_ac": "A0A5G2QWX7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWX7/entry", "sequence": { "sequence": "MIPVSLVVVVVGGWTAVYLTDLVLKSSVYFKHSYEDWLENNGLSISPFHIRWQTAVFNRAFYSWGRRKARMLYQWFNFGMVFGVIAMFSSFFLLGRTLMQTLSQMMVDSPSYSSSSSSSSSLSSSSSSSSSSSSSSSSSLHNEQVLQVVVPGINLPVSQLTYFFAAVLISGVVHEIGHGIAAIREQVRFNGFGIFLFIIYPGAFVDLFTTHLQLISPVQQLRIFCAENSEMCTDIMELHQIDVETAPVETVPVETVPMETMAMETVEEYEDISGNWVHGGHHHPPLIALQPLITSDPNQGDHDQEMILLQTQEEVVGYYESEGLLANNLENQMVVPVNEDDCFQQTLASLSASASSSSSSASSHTRKRSSHGKKPSSKKSCASGKAKAGSSSEERSKKWEQTEVQIKTLEGQFSVTMWSPTDKRDQETGQTEENPAPDYTEYMKGKKLPPEGIPGVDLSDPKQLAEFTRMKPKKTKEEAPRTIACAHKGCPKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDCCNKKFAQSTNLKSHILTHAKNKNGQ", "length": 601, "header": "tr|A0A5G2QWX7-1|A0A5G2QM15_PIG Computationally mapped isoform of Membrane-bound transcription factor site-2 protease OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A5G2QM15-1" }, "locus": { "chromosome": "X", "start_pos": 18032914, "end_pos": 18014033, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066843.2", "url": "https://www.ensembl.org/id/ENSSSCT00000066843.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062690.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062690.1" } ] } }, { "isoform_ac": "A0A5G2R2K9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2K9/entry", "sequence": { "sequence": "MIPVSLVVVVVGGWTAVYLTDLVLKSSVYFKHSYEDWLENNGLSISPFHIRWQTAVFNRAFYSWGRRKARMLYQWFNFGMVFGVIAMFSSFFLLGRTLMQTLSQMMVDSPSYSSSSSSSSSLSSSSSSSSSSSSSSSSSLHNEQVLQVVVPGINLPVSQLTYFFAAVLISGVVHEIGHGIAAIREQVRFNGFGIFLFIIYPGAFVDLFTTHLQLISPVQQLRIFCAGIWHNFVLALLGILALVLLPVILLPFYYTGVGVLITEVAEIDMLYVGHPLHLHYTVSITSFIPRFNFLSIDLPVVVETFVKYLISLSGALAIVNAVPCFALDGQWILNSFLDATLTSVIGDNDVKDLIGFFILLGGSVLLAANVTLGLWMVTAR", "length": 380, "header": "tr|A0A5G2R2K9-1|A0A5G2QM15_PIG Computationally mapped isoform of Membrane-bound transcription factor site-2 protease OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A5G2QM15-1" }, "locus": { "chromosome": "X", "start_pos": 18051450, "end_pos": 18014033, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069220.1", "url": "https://www.ensembl.org/id/ENSSSCT00000069220.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071426.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071426.1" } ] } }, { "isoform_ac": "K7GQR3-1", "url": "https://www.uniprot.org/uniprotkb/K7GQR3/entry", "sequence": { "sequence": "MIPVSLVVVVVGGWTAVYLTDLVLKSSVYFKHSYEDWLENNGLSISPFHIRWQTAVFNRAFYSWGRRKARMLYQWFNFGMVFGVIAMFSSFFLLGRTLMQTLSQMMVDSPSYSSSSSSSSSLSSSSSSSSSSSSSSSSSLHNEQVLQVVVPGINLPVSQLTYFFAAVLISGVVHEIGHGIAAIREQVRFNGFGIFLFIIYPGAFVDLFTTHLQLISPVQQLRIFCAGIWHNFVLALLGILALVLLPVILLPFYYTGVGVLITEVAEDSPAIGPRGLFVGDLVTHLQDCPVTNVQIGYCISASTLQQLSFPVRAYKRLDGSTECCNNHSLTDVCFSYRNNFNKRLHTCLPARKAVEATQVCRTNKDCKKSSSSSFCIIPSLETHTRLIKVKHPPQIDMLYVGHPLHLHYTVSITSFIPRFNFLSIDLPVVVETFVKYLISLSGALAIVNAVPCFALDGQWILNSFLDATLTSVIGDNDVKDLIGFFILLGGSVLLAANVTLGLWMVTAR", "length": 508, "header": "tr|K7GQR3-1|A0A5G2QM15_PIG Computationally mapped isoform of Membrane-bound transcription factor site-2 protease OS=Sus scrofa OX=9823 GN= PE=3 SV=3 CANONICAL=A0A5G2QM15-1" }, "locus": { "chromosome": "X", "start_pos": 18051450, "end_pos": 18014033, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000033234.3", "url": "https://www.ensembl.org/id/ENSSSCT00000033234.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000030236.3", "url": "https://www.ensembl.org/id/ENSSSCP00000030236.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "K7GQR3", "url": "https://www.uniprot.org/uniprotkb/K7GQR3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:102165056", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102165056", "resource": "KEGG Pathway" }, { "id": "R-SSC-1655829", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1655829", "resource": "Reactome", "description": "Regulation of cholesterol biosynthesis by SREBP (SREBF)" }, { "id": "R-SSC-381033", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-381033", "resource": "Reactome", "description": "ATF6 (ATF6-alpha) activates chaperones" }, { "id": "R-SSC-8874177", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8874177", "resource": "Reactome", "description": "ATF6B (ATF6-beta) activates chaperones" }, { "id": "R-SSC-8874211", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8874211", "resource": "Reactome", "description": "CREB3 factors activate genes" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q2TYD2-1", "protein_name": "Membrane-bound transcription factor site-2 protease", "gene_name": "MBTPS2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MIPISVVVCVLGGWCAIYLADTLLKSSSSLKASYEDWLVNYGLSVSPFHMRWQTALFNRQFYNWGRWKPRFLYLWFSMGMVFGIAAMFGSVILLGKTLMQTLTQMLTEAPTAPNDRMLQVVVPGVNLPVSQLTYFFSAILISGVIHEVGHGVAAIREQVRFNGFGIFIFIVYPGAFVDLFTTHLQLISPVQQLRIFCAGVWHNFVLGVVSFMVLFLLPAFLFPFYYTGVGAFVTEVTEDSPANGPRGLFVGDIVTSLQDCPIYGVEDWNSCLGDLSQKSQIGYCINAATLQQLSFPARVYRRLDGTVECCSNNSLTDICFSYNTNLDSHRYACLPARKVIEASKVCRTNADCQKDFVPSFCVTPSLENQTRLIRVKHPPHMDMLFVGHPMHLQYTVSLSSFVPRHNFLSIDLPVVIETFCKYLISLSGALAVINAVPCFALDGQWILNSFLEATLSSLIVEKQNRELVGFLILLAGSTLLAANVALGLWMVTAR", "length": 494 }, "evidence": [ { "id": "A0A5G2QM15", "url": "https://omabrowser.org/oma/group/A0A5G2QM15/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F4JUU5-1", "protein_name": "Membrane-bound transcription factor site-2 protease homolog", "gene_name": "S2P", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEISGRRMRRFRMRFRRDHLTGGENIENEASCCYCDLKISNFNEPIFRLGRRFSGVLKVWFSIGLGFGVASLILVTVFLLLQFHSNPLFSNRLTSAVFGFSPSTRVSLSGIAYVLVSTVITVSVHELGHALAAASEGIQMEYIAVFIAAIFPGGLVAFDNDVLQSLPSFNALRIYCAGIWHNAVFCALCVFALFLLPVMLSPFYKHGESLTVVDVPSVSPLFGYLSPGDVIVSLDGIQVHKPSEWLELAAILDKENSKTSNGSLYLGGSRRFHHGKGYCVPISLIEEGYKGKMVENQFVCPGDLTAFRTMPCSNAAIREVSVCLDAKDIVKLQKCGDGWVTTSDTDNQSDCVCPQGDLCLQAMQSPGVLWTEITYKRTSSQDCSRLGLDFNTSNCLGTFVFVGDLIAMSHSVHLTAYQPRWLFNFFGKSFPNILERSLTCTFHVSLALVLLNSLPVYYLDGESILESSLQSFTWLSPRKKKKALQVCLVGGSLLSFLAFFRIFLLGLPLSRRW", "length": 513 }, "evidence": [ { "id": "A0A5G2QM15", "url": "https://omabrowser.org/oma/group/A0A5G2QM15/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O43462-1", "protein_name": "Membrane-bound transcription factor site-2 protease", "gene_name": "MBTPS2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MIPVSLVVVVVGGWTVVYLTDLVLKSSVYFKHSYEDWLENNGLSISPFHIRWQTAVFNRAFYSWGRRKARMLYQWFNFGMVFGVIAMFSSFFLLGKTLMQTLAQMMADSPSSYSSSSSSSSSSSSSSSSSSSSSSSLHNEQVLQVVVPGINLPVNQLTYFFTAVLISGVVHEIGHGIAAIREQVRFNGFGIFLFIIYPGAFVDLFTTHLQLISPVQQLRIFCAGIWHNFVLALLGILALVLLPVILLPFYYTGVGVLITEVAEDSPAIGPRGLFVGDLVTHLQDCPVTNVQDWNECLDTIAYEPQIGYCISASTLQQLSFPVRAYKRLDGSTECCNNHSLTDVCFSYRNNFNKRLHTCLPARKAVEATQVCRTNKDCKKSSSSSFCIIPSLETHTRLIKVKHPPQIDMLYVGHPLHLHYTVSITSFIPRFNFLSIDLPVVVETFVKYLISLSGALAIVNAVPCFALDGQWILNSFLDATLTSVIGDNDVKDLIGFFILLGGSVLLAANVTLGLWMVTAR", "length": 519 }, "evidence": [ { "id": "A0A5G2QM15", "url": "https://omabrowser.org/oma/group/A0A5G2QM15/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "O54862-1", "protein_name": "Membrane-bound transcription factor site-2 protease", "gene_name": "MBTPS2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MIPVSLVVVVVGGWTAVYLADLVLKSSVYFKHSYEDWLEKNGLSISPFHIRWQTSVFNRAFYSWGRRKARMLYQWFNFGMVFGVIAMFSSFFLLGKTLMQTLAQMMADSPSSSSSSSSSSSSSSSSSIHNEQVLQVVVPGINLPVNQLTYFFAAVLISGVVHEIGHGIAAIREQVRFNGFGIFLFIIYPGAFVDLFTTHLQLISPVQQLRIFCAGIWHNFVLALLGILALVLLPVILLPFYYTGVGVLITEVAEDSPAIGPRGLFVGDLVTHLQDCPVTNVQDWNECLDTIAYEPQIGYCISASTLQQLSFPVRAYKRLDGSTECCNNHSLTDVCFSYRNNFNKRLHTCLPARKAVEATQVCRTNKDCKTSSSSSFCIVPSLETHTRLIKVKHPPQIDMLYVGHPLHLHYTVSITSFIPRFNFLSIDLPVIVETFVKYLISLSGALAIVNAVPCFALDGQWILNSFLDATLTSVIGDNDVKDLIGFFILLGGSVLLAANVTLGLWMVTAR", "length": 510 }, "evidence": [ { "id": "A0A5G2QM15", "url": "https://omabrowser.org/oma/group/A0A5G2QM15/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q0III2-1", "protein_name": "Membrane-bound transcription factor site-2 protease", "gene_name": "MBTPS2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MIPVSLVVVVVGGWTAVYLTDLVLKSSVYFKHSYEDWLENNGLSISPFHIRWQTAVFNRAFYSWGRRKARMLYQWFNFGMVFGVIAMFSSFFLLGKTLIQTLGQMMADSSYSSSSSSSSHSSSSSSSSSSSSSLYNEQVLQVVVPGINLPVNQLTYFFAAVLISGVVHEIGHGIAAIREQVRFNGFGIFLFIIYPGAFVDLFTTHLQLISPVQQLRIFCAGIWHNFILALLGILALILLPVILLPFYYTGVGVLITEVAEDSPAIGPRGLFVGDLVTHLQDCPVTNVQDWNECLDTITYEPQIGYCISASTLQQLSFPVRAYKRLDGSTECCNNHSLTDVCFSYRNNFNKRLHTCLPARKAVEATQVCRTNKDCKKSSSSSFCIIPSLETHTRLIKVKHPPQIDMLYVGHPLHLHYTVSITSFIPRFKFLSIDLPVVVETFVKYLISLSGALAIVNAVPCFALDGQWILNSFLDATLTSVIGDNDVKDLIGFFILLGGSILLAANVALGLWMVTAR", "length": 516 }, "evidence": [ { "id": "A0A5G2QM15", "url": "https://omabrowser.org/oma/group/A0A5G2QM15/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3TTC2-1", "protein_name": "Transcription factor YY2", "gene_name": "Yy2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASETEKLLCLNTESAEIPADFVELLPPDNIGDIEAVSLETSVGQTIEVYGDVGVDWAHGSQYHSPVIALQPLVGSSLSSRDHDKEMFVVQTREEEVVGYQDSDNLLFSPEFGSQMVLPVNEDDYLQPTTASFTGFLAAENGQGELSPYEGNLCGLTTFIEAGAEESVNADLGDKQWEQKQIDGLDGEFPFTMWDDVNEKEDPIAEEQAGESPPDYSEYMTGKKFPPEGIPGIDLSDPKQLAEFTSMRPKKPKGDFPRPIACSHKGCEKMFKDNSAMRKHLHIHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPYQCTFEGCGRRFSLDFNLRTHVRIHTGDKPFVCPFDACNKKFAQSTNLKSHILTHVKNKNDQ", "length": 378 }, "evidence": [ { "id": "A0A5G2QM15", "url": "https://omabrowser.org/oma/group/A0A5G2QM15/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q552N4-1", "protein_name": "Endopeptidase S2P", "gene_name": "mbtps2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEALNNPMSAPFFSFVVKVIGIWIIFFGILKLIYIKYKDQIDIDGFLERTNLSVQLFYIGFSTTRLNSMIKSISNGRYERFWYYWFKIGSWVSLSLLPLSIGLLIYNLFIIFIKPTGIEPVISPIVPGVNVKGSDSWYLIISVLISMIIHELGHAIASYVSKCEINSIGFFFLFIMPGASVNLDYIELDKISLWQKLRIQCGGVWHNVVLCIIGYLLLSSSSFLLSPLYKISNDKLYITGIPNGSLLERNLNIGDQILSINDCKISNRSDLVECIYKELDKTRSYCISQNTITCLENVFNNNNNNNTNVNLSNANNKKINLINQIDNDKRLRECFGINDATTLVECVPVSIDSPSECAKSKKECINFNQFNYHIFHLNLLSQDFDNVEQLSFLGTAQQLWDSFIVNNYQSRFVFLNGWDLPWYFNQFFSYLIPVSAGLAAFNAIAIPNMDGEHILETILSIIFLKFGGSACGNDKKNSPNNKINKTKINNTNNNNNNNNNNNNNSNNNNNNNNKESSSSSVLSKKEKRERLKLIISKVIKVSTILLFGLTVILSFYNLKYQR", "length": 562 }, "evidence": [ { "id": "A0A5G2QM15", "url": "https://omabrowser.org/oma/group/A0A5G2QM15/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8CHX6-1", "protein_name": "Membrane-bound transcription factor site-2 protease", "gene_name": "Mbtps2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIPVSLLVVVVGGWTAVYLADLVLKSSVYFKHSYEDWLENNGLSISPFHIRWQTSIFNRAFYSWGRRKARMLYQWFNFGMVFGVIAMFSSFFLLGKTLMQTLAQMMADSPSPYSSSSSSSSSSSSSSSSSSSLHNEQVLQVVVPGINLPVNQLTYFFAAVLISGVVHEIGHGIAAIREQVRFNGFGIFLFIIYPGAFVDLFTTHLQLISPVQQLRIFCAGIWHNFVLALLGILALVLLPVILLPFYYTGVGVLITEVAEDSPAIGPRGLFVGDLVTHLQDCPVTNVQDWNECLDTIAYEPQIGYCISASTLQQLSFPVRAYKRLDGSTECCNNHSLTDVCFSYRNNFNKRLHTCLPARKAVEATQVCRSNKDCKSGASSSFCIVPSLETHTRLIKVKHPPQIDMLYVGHPLHLHYTVSITSFIPRFNFLSIDLPVIVETFVKYLISLSGALAIVNAVPCFALDGQWILNSFLDATLTSVIGDNDVKDLIGFFILLGGSVLLAANVTLGLWMVTAR", "length": 515 }, "evidence": [ { "id": "A0A5G2QM15", "url": "https://omabrowser.org/oma/group/A0A5G2QM15/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "metalloendopeptidase activity", "id": "GO:0004222", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004222", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM15" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM15" } ], "pmid": "" }, { "name": "cis-regulatory region sequence-specific DNA binding", "id": "GO:0000987", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000987", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM15" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM15" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM15" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM15" } ], "pmid": "" }, { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM15" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM15" } ], "pmid": "" }, { "name": "membrane protein intracellular domain proteolysis", "id": "GO:0031293", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031293", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM15" } ], "pmid": "" }, { "name": "regulation of response to endoplasmic reticulum stress", "id": "GO:1905897", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905897", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM15" } ], "pmid": "" }, { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM15" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 340, "end_pos": 342, "annotation": "n_glycosylation_sequon" }, { "start_pos": 511, "end_pos": 513, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-1655851", "name": "S2P hydrolyzes SREBP1A,1C,2", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "Golgi membrane, cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1655851", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1655851" } ] }, { "id": "R-SSC-420818", "name": "MBTPS2 (S2P) cleaves ATF6 (ATF6-alpha)", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "Golgi membrane, cytosol", "input_participant_list": [ "R-SSC-420815" ], "output_participant_list": [ "R-SSC-420817" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-420818", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-420818" } ] }, { "id": "R-SSC-8874122", "name": "MBTPS2 (S2P) cleaves ATF6B (ATF6-beta)", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "Golgi membrane, cytosol", "input_participant_list": [ "R-SSC-8874148" ], "output_participant_list": [ "R-SSC-8874143", "R-SSC-8874171" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-8874122", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8874122" } ] }, { "id": "R-SSC-8874201", "name": "MBTPS2 (S2P) cleaves CREB3L3", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "Golgi membrane, cytosol", "input_participant_list": [], "output_participant_list": [ "R-SSC-8874183", "R-SSC-8874214" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-8874201", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8874201" } ] } ], "reaction_participants": [ { "participant_id": "R-SSC-420815", "participant_name": "ATF6 [Golgi membrane]", "crossref": [ { "id": "A0A5G2Q9P8", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000006346", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCP00000060683", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000088090", "database": "ENSEMBL", "url": "" }, { "id": "85609", "database": "VGNC", "url": "" } ] }, { "participant_id": "R-SSC-420817", "participant_name": "ATF6 [Golgi membrane]", "crossref": [ { "id": "A0A5G2Q9P8", "database": "UniProt", "url": "" }, { "id": "ENSSSCP00000060683", "database": "ENSEMBL", "url": "" }, { "id": "85609", "database": "VGNC", "url": "" }, { "id": "ENSSSCT00000088090", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCG00000006346", "database": "ENSEMBL", "url": "" } ] }, { "participant_id": "R-SSC-8874143", "participant_name": "ATF6B(2-398) [cytosol]", "crossref": [ { "id": "A0A8D1F7S3", "database": "UniProt", "url": "" } ] }, { "participant_id": "R-SSC-8874148", "participant_name": "ATF6B(2-440) [Golgi membrane]", "crossref": [ { "id": "A0A8D1F7S3", "database": "UniProt", "url": "" } ] }, { "participant_id": "R-SSC-8874171", "participant_name": "ATF6B(399-440) [Golgi membrane]", "crossref": [ { "id": "A0A8D1F7S3", "database": "UniProt", "url": "" } ] }, { "participant_id": "R-SSC-8874183", "participant_name": "CREB3L3 [Golgi membrane]", "crossref": [ { "id": "ENSSSCP00000014349", "database": "ENSEMBL", "url": "" }, { "id": "86982", "database": "VGNC", "url": "" }, { "id": "F1S7N6", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000013501", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000014747", "database": "ENSEMBL", "url": "" } ] }, { "participant_id": "R-SSC-8874214", "participant_name": "CREB3L3 [cytosol]", "crossref": [ { "id": "ENSSSCP00000014349", "database": "ENSEMBL", "url": "" }, { "id": "86982", "database": "VGNC", "url": "" }, { "id": "F1S7N6", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000013501", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000014747", "database": "ENSEMBL", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QM15", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM15" }, { "id": "PF02163", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02163" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Peptidase M50", "eco_id": "ECO_0000259", "start_pos": 162, "end_pos": 502, "start_aa": "Tyr", "end_aa": "Leu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 340, "end_pos": 342 }, { "start_pos": 511, "end_pos": 513 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { 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scrofa OX=9823 GN=CDC16 PE=4 SV=2 CANONICAL=A0A287B3F6-1" }, "locus": { "chromosome": "11", "start_pos": 79111394, "end_pos": 79084280, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071005.2", "url": "https://www.ensembl.org/id/ENSSSCT00000071005.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063580.2", "url": "https://www.ensembl.org/id/ENSSSCP00000063580.2" } ] } }, { "isoform_ac": "A0A5G2R054-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R054/entry", "sequence": { "sequence": 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"https://www.ensembl.org/id/ENSSSCP00000071066.1" } ] } }, { "isoform_ac": "A0A8D1ZA71-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1ZA71/entry", "sequence": { "sequence": "MASKSWLNFLTFLCGSAVGFVLCSQLLSILLGEQSDIQPNILHNDPHARHSDDNGQNHLEGQINFGADASQHKDENTDIAENLYQKVKILCWVMTGPQNLEKKAKHVKATWAQRCNKVLFMSSEENKDFPAVGLNTREGRDQLYWKTIKAFQYVHDHYLEDADWFLKADDDTYVILDNLRWLLSKYNPEEPIYFGRRFKPYVKQGYMSGGAGYVLSKEALKRFVDGFKTDRCTHSSSIEDLALGRCMEIVNVEAGDSRDTTGKETFHPFVPEHHLIKGYLPRTFWYWNYNYYPPVEGPGCCSDLAVSFHYVDPTTMYELEYLVYHLRPYGYLYRYQPALPEKMLKEISQVYKNEDPKVN", "length": 359, "header": "tr|A0A8D1ZA71-1|A0A5G2QHX1_PIG Computationally mapped isoform of Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A5G2QHX1-1" }, "locus": { "chromosome": "9", "start_pos": 77543994, "end_pos": 77531984, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061243.2", "url": "https://www.ensembl.org/id/ENSSSCT00000061243.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031734.2", "url": "https://www.ensembl.org/id/ENSSSCP00000031734.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D1ZA71", "url": "https://www.uniprot.org/uniprotkb/A0A8D1ZA71" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100525767", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525767", "resource": "KEGG Pathway" }, { "id": "R-SSC-913709", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-913709", "resource": "Reactome", "description": "O-linked glycosylation of mucins" } ], "orthologs": [ { "uniprot_canonical_ac": "Q0VC84-1", "protein_name": "Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1", "gene_name": "C1GALT1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MASKSWLNILTFLCGSAVGFVLCSQLLSILFEEQKDIQPSILHNDPHARHSDDNEQNHLEGQMNFDADASQHKDENTDIADKLYQKVKILCWVMTGPQNLEKKAKHVKATWAQRCNKVLFMSSEENKDFPAVGLKTREGRDQLYWKTIKAFQYVHDHYLEDADWFMKADDDTYVILDNLRWLLSKYNPEEPIYFGRRFKPYVKQGYMSGGAGYVLSKEALKRFVEAFKTDKCTHSSSIEDLALGRCMEIINVEAGDSRDTTGKETFHPFVPEHHLIKGYLPRTFWYWNYNYYPPVEGPGCCSDLAVSFHYVDPTTMYELEYLVYHLRPYGYLYRYQPALPEKMLKEVSQIYKNEDTNVNQEPLKEKHK", "length": 368 }, "evidence": [ { "id": "A0A5G2QHX1", "url": "https://omabrowser.org/oma/group/A0A5G2QHX1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q7K237-1", "protein_name": "Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1", "gene_name": "C1GalTA", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MTANSLLGRSILNEGRSNKRSFVSLIVGLIVGFCLAELFVYSTPERSEFMPYDGHRHGDVNDAHHSHDMMEMSGPEQDVGGHEHVHENSTIAERLYSEVRVLCWIMTNPSNHQKKARHVKRTWGKRCNKLIFMSSAKDDELDAVALPVGEGRNNLWGKTKEAYKYIYEHHINDADWFLKADDDTYTIVENMRYMLYPYSPETPVYFGCKFKPYVKQGYMSGGAGYVLSREAVRRFVVEALPNPKLCKSDNSGAEDVEIGKCLQNVNVLAGDSRDSNGRGRFFPFVPEHHLIPSHTDKKFWYWQYIFYKTDEGLDCCSDNAISFHYVSPNQMYVLDYLIYHLRPYGIINTPDALPNKLAVGELMPEIKEQATESTSDGVSKRSAETKTQ", "length": 388 }, "evidence": [ { "id": "A0A5G2QHX1", "url": "https://omabrowser.org/oma/group/A0A5G2QHX1/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9JJ05-1", "protein_name": "Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1", "gene_name": "C1galt1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASKSWLNFLTFLCGSAIGFFLCSQLLNILLQEQADVQPNMLHNDPHARHSDDSGHNHLKGQMDFNADSSQHKDENTDVAENLYQKVKVLCWVMTSPQNLEKKAKHVKATWAQRCNKVLFMSSEENKDFPTVGLETKEGREQLYWKTIKAFQYVHDHYLEDADWFMKADDDTYVILDNLRWLLSKYNPEQPIYFGRRFKPYVKQGYMSGGAGYVLSKEALRRFVDAFKTEKCTHSSSIEDLALGRCMEIIKVEAGDSRDPTGKETFHPFVPEHHLIKGYLPKTFWYWNYNYYPPVEGPGCCSDIAVSFHYVDSTTMYELEYLVYHLRPYGYLYRYQPALPENILKEINQVNKKEDTKIKLGNP", "length": 363 }, "evidence": [ { "id": "A0A5G2QHX1", "url": "https://omabrowser.org/oma/group/A0A5G2QHX1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9JJ06-1", "protein_name": "Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1", "gene_name": "C1galt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKSWLNFLVFLCGSAIGFFLCSQLLSILLREEAAIQPNMLHNDPHARHSDDNGHSHLKGQMNFNADSSQHKDENIDVAENLYQKVKILCWVMTSPQNLEKKAKHVKATWAQRCNKVLFMSSEENQDFPTVGLKTKEGREQLYWKTIKAFQYVHDHYLEDADWFMKADDDTYVIVDNLRWLLSKYNPEQPIYFGRRFKPYVKQGYMSGGAGYVLSKEALRRFVNAFKTEKCTHSSSIEDLALGRCMEIINVEAGDSRDTIGKETFHPFVPEHHLIKGYLPKTFWYWNYNYYPPIEGPGCCSDIAVSFHYVDGTTMYELEYLVYHLRPYGYLYRYQPALPENILKEINQVNRKEDTKIKLGNP", "length": 363 }, "evidence": [ { "id": "A0A5G2QHX1", "url": "https://omabrowser.org/oma/group/A0A5G2QHX1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NS00-1", "protein_name": "Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1", "gene_name": "C1GALT1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASKSWLNFLTFLCGSAIGFLLCSQLFSILLGEKVDTQPNVLHNDPHARHSDDNGQNHLEGQMNFNADSSQHKDENTDIAENLYQKVRILCWVMTGPQNLEKKAKHVKATWAQRCNKVLFMSSEENKDFPAVGLKTKEGRDQLYWKTIKAFQYVHEHYLEDADWFLKADDDTYVILDNLRWLLSKYDPEEPIYFGRRFKPYVKQGYMSGGAGYVLSKEALKRFVDAFKTDKCTHSSSIEDLALGRCMEIMNVEAGDSRDTIGKETFHPFVPEHHLIKGYLPRTFWYWNYNYYPPVEGPGCCSDLAVSFHYVDSTTMYELEYLVYHLRPYGYLYRYQPTLPERILKEISQANKNEDTKVKLGNP", "length": 363 }, "evidence": [ { "id": "A0A5G2QHX1", "url": "https://omabrowser.org/oma/group/A0A5G2QHX1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "angiogenesis", "id": "GO:0001525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001525", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHX1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHX1" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHX1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHX1" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHX1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHX1" } ], "pmid": "" }, { "name": "nucleotide binding", "id": "GO:0000166", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000166", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHX1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHX1" } ], "pmid": "" }, { "name": "glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity", "id": "GO:0016263", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016263", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHX1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHX1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 359, "end_pos": 361, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "15621", "name": "", "equation": "an N-acetyl-alpha-D-galactosaminyl derivative + UDP-alpha-D-galactose = a beta-D-galactosyl-(1->3)-N-acetyl-alpha-D-galactosaminyl derivative + UDP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "15621", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/15621" } ] }, { "id": "56196", "name": "", "equation": "a 3-O-[N-acetyl-alpha-D-galactosaminyl]-L-threonyl-[protein] + UDP-alpha-D-galactose = a 3-O-[beta-D-galactosyl-(1->3)-N-acetyl-alpha-D-galactosaminyl]-L-threonyl-[protein] + UDP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "56196", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/56196" } ] }, { "id": "56200", "name": "", "equation": "a 3-O-[N-acetyl-alpha-D-galactosaminyl]-L-seryl-[protein] + UDP-alpha-D-galactose = a 3-O-[beta-D-galactosyl-(1->3)-N-acetyl-alpha-D-galactosaminyl]-L-seryl-[protein] + UDP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "56200", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/56200" } ] }, { "id": "R-SSC-1964505", "name": "C1GALT1 transfers Galactose to the Tn antigen forming Core 1 glycoproteins (T antigens)", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "Golgi lumen, Golgi membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1964505", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1964505" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QHX1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 361, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QHX1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QHX1" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QHX1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHX1" }, { "id": "PF02434", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02434" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Fringe-like glycosyltransferase", "eco_id": "ECO_0000259", "start_pos": 89, "end_pos": 253, "start_aa": "Ile", "end_aa": "Glu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [ { "glytoucan_ac": "G00027JG", "type": "Other", "subtype": "Other" }, { "glytoucan_ac": "G00031MO", "type": "O-linked", "subtype": "Core 1" }, { "glytoucan_ac": "G00032MO", "type": "O-linked", "subtype": "Core 1" }, { "glytoucan_ac": "G00033MO", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00034MO", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00034UM", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00063MO", "type": "Other", "subtype": "Other" }, { "glytoucan_ac": "G00069YC", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00079IK", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00094SE", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00139WK", "type": "O-linked", "subtype": "Core 1" }, { "glytoucan_ac": "G00164QP", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00196CO", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00238CK", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00241VQ", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00287UD", "type": "O-linked", "subtype": "Core 1" }, { "glytoucan_ac": "G00318OS", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00372ZO", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00376RB", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00394CR", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00423TL", "type": "O-linked", "subtype": "Core 1" }, { "glytoucan_ac": "G00428HK", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00430ZK", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00464AQ", "type": "Other", "subtype": "Other" }, { "glytoucan_ac": "G00467QU", "type": "O-linked", "subtype": "Core 1" }, { "glytoucan_ac": "G00468NI", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00496OX", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00560KG", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00653TI", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00675GF", "type": "O-linked", "subtype": "Core 9" }, { "glytoucan_ac": "G00682IE", "type": "O-linked", "subtype": "Core 1" }, { "glytoucan_ac": "G00707RC", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00728SN", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00729SA", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00754TS", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00789VI", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00803TF", "type": "O-linked", "subtype": "Core 1" }, { "glytoucan_ac": "G00872ZT", "type": "O-linked", "subtype": "Core 1" }, { "glytoucan_ac": "G00891GP", "type": "O-linked", "subtype": "Core 1" }, { "glytoucan_ac": "G00897BY", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00907IC", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00932UQ", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00944OL", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00952LS", "type": "Other", "subtype": "Other" }, { "glytoucan_ac": "G00967VH", "type": "O-linked", "subtype": "Core 1" }, { "glytoucan_ac": "G00978GW", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00979XR", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00980BE", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G01040ZV", "type": "O-linked", "subtype": "Core 1" }, { "glytoucan_ac": "G01116MS", "type": "Other", "subtype": "Other" }, { "glytoucan_ac": "G01155GN", "type": "O-linked", "subtype": "Core 1" }, { 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"A0A5G2QKW6", "uniprot_id": "A0A5G2QKW6_PIG", "mass": { "chemical_mass": 38763.0, "monoisotopic_mass": 38763.0 }, "refseq": { "ac": "XP_003134309", "name": "arginine-hydroxylase NDUFAF5, mitochondrial isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134309" }, "gene_names": [ { "name": "NDUFAF5", "type": "recommended", "evidence": [ { "id": "A0A5G2QKW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW6" } ] }, { "name": "NDUFAF5", "type": "synonym", "evidence": [ { "id": "XP_003134309", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134309" } ] } ], "protein_names": [ { "name": "Arginine-hydroxylase NDUFAF5, mitochondrial", "type": "recommended", "evidence": [ { "id": "A0A5G2QKW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW6/entry#names_and_taxonomy" } ] }, { "name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5", "type": "synonym", "evidence": [ { "id": "A0A5G2QKW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW6/entry#names_and_taxonomy" } ] }, { "name": "Putative methyltransferase NDUFAF5", "type": "synonym", "evidence": [ { "id": "A0A5G2QKW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW6/entry#names_and_taxonomy" } ] }, { "name": "arginine-hydroxylase NDUFAF5, mitochondrial isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003134309", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134309" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKW6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NDUFAF5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW6", "locus": { "chromosome": "17", "start_pos": 22511180, "end_pos": 22480340, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000007076", "url": "https://www.ensembl.org/id/ENSSSCG00000007076" } ] } } ], "crossref": [ { "id": "A0A5G2QKW6", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QKW6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000007076", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000007076", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd02440", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd02440", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100520522", "url": "https://www.ncbi.nlm.nih.gov/gene/100520522", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR013216", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013216", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029063", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029063", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050602", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050602", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100520522", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520522", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YEVVYGH", "url": "https://omabrowser.org/oma/group/YEVVYGH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZRY3", "url": "https://www.orthodb.org/?gene=A0A286ZRY3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A287B3R9", "url": "https://www.orthodb.org/?gene=A0A287B3R9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QKW6", "url": "https://www.orthodb.org/?gene=A0A5G2QKW6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13090", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13090", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13090:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13090:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF08241", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08241", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6799198", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6799198", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003134309", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134309", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZRY3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRY3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZRY3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRY3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ATV3", "url": "https://www.uniprot.org/uniprotkb/A0A287ATV3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ATV3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ATV3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B3R9", "url": "https://www.uniprot.org/uniprotkb/A0A287B3R9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B3R9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B3R9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QKW6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QKW6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QMD7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMD7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QMD7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMD7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SBJ3", "url": "https://www.uniprot.org/uniprotkb/F1SBJ3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SBJ3-1", "url": "https://www.uniprot.org/uniprotkb/F1SBJ3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLQLTRLRLWWRLSPAVGVPAKNLGLRKVASGVSSRGSTSPRALNIFDRDLKRKQKNWAARQPEPMKFDYLKEEVGSRIADRVYDITRDFPLALDVGCGRGYIAQHLNKETVGKFFQTDIAEHALKNTLEMEIPTVSVLADEEFLPFRENTFDLVVSSLSLHWVNDLPRALEQIHYVLKPDGVFIGAMFGGDTLYELRCSLQLAETEREGGFSPHVSPFTAVSDLGHLLGRAGFTTLTVDTDEIQVNYPGMFELMEDLQGMGESNCAWNRKALLHRDTMLAAAAVYGEMYRNEDGSVPATYQIYYMIGWKYHDSQARPAERGSATVSFGELGKINDLMSQGKKSQ", "length": 345, "header": "tr|A0A5G2QKW6-1|A0A5G2QKW6_PIG Isoform 1 of Arginine-hydroxylase NDUFAF5, mitochondrial OS=Sus scrofa OX=9823 GN=NDUFAF5 PE=1 SV=1 CANONICAL=A0A5G2QKW6-1" }, "isoforms": [ { "isoform_ac": "A0A286ZRY3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRY3/entry", "sequence": { "sequence": "MLQLTRLRLWWRLSPAVGVPAKNLGLRKVASGVSSRGSTSPRALNIFDRDLKRKQKNWAARQPEPMKFDYLKEEVGSRIADRVYDITRKPLESFFKQTLQNMLCLHWVNDLPRALEQIHYVLKPDGVFIGAMFGGDTLYELRCSLQLAETEREGGFSPHVSPFTAVSDLGHLLGRAGFTTLTVDTDEIQVNYPGMFELMEDLQGMGESNCAWNRKALLHRDTMLAAAAVYGEMYRNEDGSVPATYQIYYMIGWKYHDSQARPAERGSATVSFGELGKINDLMSQGKKSQ", "length": 289, "header": "tr|A0A286ZRY3-1|A0A5G2QKW6_PIG Computationally mapped isoform of Arginine-hydroxylase NDUFAF5, mitochondrial OS=Sus scrofa OX=9823 GN=NDUFAF5 PE=1 SV=1 CANONICAL=A0A5G2QKW6-1" }, "locus": { "chromosome": "17", "start_pos": 22508778, "end_pos": 22480388, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000057923.2", "url": "https://www.ensembl.org/id/ENSSSCT00000057923.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034389.1", "url": "https://www.ensembl.org/id/ENSSSCP00000034389.1" } ] } }, { "isoform_ac": "A0A287ATV3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ATV3/entry", "sequence": { "sequence": "MLQLTRLRLWWRLSPAVGVPAKNLGLRKVASGVSSRGSTSPRALNIFDRDLKRKQKNWAARQPEPMKFDYLKEEVGSRIADRVYDITRDFPLALDVGCGRGYIAQHLNKETVGKFFQTDIAEHALKNTLEMEIPTVSVLADEEFLPFRENTFDLVVSSLSLHWVNDLPRALEQIHYVLKPDGVFIGAMFGGDTLYELRCSLQLAETEREGGFSPHVSPFTAVSDLGHLLGRAGFTTLTVDTDEIQVNYPGMFELMEDLQEMYRNEDGSVPATYQIYYMIGWKYHDSQARPAERGSATVSFGELGKINDLMSQGKKSQ", "length": 317, "header": "tr|A0A287ATV3-1|A0A5G2QKW6_PIG Computationally mapped isoform of Arginine-hydroxylase NDUFAF5, mitochondrial OS=Sus scrofa OX=9823 GN=NDUFAF5 PE=1 SV=1 CANONICAL=A0A5G2QKW6-1" }, "locus": { "chromosome": "17", "start_pos": 22508778, "end_pos": 22480388, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056273.2", "url": "https://www.ensembl.org/id/ENSSSCT00000056273.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047361.1", "url": "https://www.ensembl.org/id/ENSSSCP00000047361.1" } ] } }, { "isoform_ac": "A0A287B3R9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B3R9/entry", "sequence": { "sequence": "MLQLTRLRLWWRLSPAVGVPAKNLGLRKVASGVSSRGSTSPRALNIFDRDLKRKQKNWAARQPEPMKFDYLKEEVGSRIADRVYDITRDFPLALDVGCGRGYIAQHLNKETVGKFFQTDIAEHALIHYVLKPDGVFIGAMFGGDTLYELRCSLQLAETEREGGFSPHVSPFTAVSDLGHLLGRAGFTTLTVDTDEIQVNYPGMFELMEDLQGMGESNCAWNRKALLHRDTMLAAAAVYGEMYRNEDGSVPATYQIYYMIGWKYHDSQARPAERGSATVSFGELGKINDLMSQGKKSQ", "length": 297, "header": "tr|A0A287B3R9-1|A0A287B3R9_PIG Computationally mapped isoform of NADH:ubiquinone oxidoreductase complex assembly factor 5 OS=Sus scrofa OX=9823 GN=NDUFAF5 PE=1 SV=1 CANONICAL=A0A5G2QKW6-1" }, "locus": { "chromosome": "17", "start_pos": 22508778, "end_pos": 22480388, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038197.2", "url": "https://www.ensembl.org/id/ENSSSCT00000038197.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051126.1", "url": "https://www.ensembl.org/id/ENSSSCP00000051126.1" } ] } }, { "isoform_ac": "A0A5G2QKW6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW6/entry", "sequence": { "sequence": "MLQLTRLRLWWRLSPAVGVPAKNLGLRKVASGVSSRGSTSPRALNIFDRDLKRKQKNWAARQPEPMKFDYLKEEVGSRIADRVYDITRDFPLALDVGCGRGYIAQHLNKETVGKFFQTDIAEHALKNTLEMEIPTVSVLADEEFLPFRENTFDLVVSSLSLHWVNDLPRALEQIHYVLKPDGVFIGAMFGGDTLYELRCSLQLAETEREGGFSPHVSPFTAVSDLGHLLGRAGFTTLTVDTDEIQVNYPGMFELMEDLQGMGESNCAWNRKALLHRDTMLAAAAVYGEMYRNEDGSVPATYQIYYMIGWKYHDSQARPAERGSATVSFGELGKINDLMSQGKKSQ", "length": 345, "header": "tr|A0A5G2QKW6-1|A0A5G2QKW6_PIG Isoform 1 of Arginine-hydroxylase NDUFAF5, mitochondrial OS=Sus scrofa OX=9823 GN=NDUFAF5 PE=1 SV=1 CANONICAL=A0A5G2QKW6-1" }, "locus": { "chromosome": "17", "start_pos": 22508778, "end_pos": 22480388, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075741.1", "url": "https://www.ensembl.org/id/ENSSSCT00000075741.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065185.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065185.1" } ] } }, { "isoform_ac": "A0A5G2QMD7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMD7/entry", "sequence": { "sequence": "MLQLTRLRLWWRLSPAVGVPAKNLGLRKVASGVSSRGSTSPRALNIFDRDLKRKQKNWAARQPEPMKFDYLKEEVGSRIADRVYDITRDFPLALDVGCGRGYIAQHLNKYLYHCRKPLESFFKQTLQNMLCLHWVNDLPRALEQIHYVLKPDGVFIGAMFGGDTLYELRCSLQLAETEREGGFSPHVSPFTAVSDLGHLLGRAGFTTLTVDTDEIQVNYPGMFELMEDLQGMGESNCAWNRKALLHRDTMLAAAAVYGEMYRNEDGSVPATYQIYYMIGWKYHDSQARPAERGSATVSFGELGKINDLMSQGKKSQ", "length": 316, "header": "tr|A0A5G2QMD7-1|A0A5G2QKW6_PIG Computationally mapped isoform of Arginine-hydroxylase NDUFAF5, mitochondrial OS=Sus scrofa OX=9823 GN=NDUFAF5 PE=1 SV=1 CANONICAL=A0A5G2QKW6-1" }, "locus": { "chromosome": "17", "start_pos": 22508778, "end_pos": 22480388, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075167.1", "url": "https://www.ensembl.org/id/ENSSSCT00000075167.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065783.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065783.1" } ] } }, { "isoform_ac": "F1SBJ3-1", "url": "https://www.uniprot.org/uniprotkb/F1SBJ3/entry", "sequence": { "sequence": "MLQLTRLRLWWRLSPAVGVPAKNLGLRKVASGVSSRGSTSPRALNIFDRDLKRKQKNWAARQPEPMKFDYLKEEVGSRIADRVYDITRDFPLALDVGCGRGYIAQHLNKETVGKFFQTDIAEHALKNTLEMEIPTVSVLADEEFLPFRENTFDLVVSSLSLHWVNDLPRALEQIHYVLKPDGVFIGAMFGGDTLYELRCSLQLAETEREGGFSPHVSPFTAVSDLGHLLGRAGFTTLTVDTDEIQVNYPGMFELMEDLQGMGESNCAWNRKALLHRDTMLAAAAVYGEMYRNEDGSVPVTLLRQISFLSGFIPAERGSATVSFGELGKINDLMSQGKKSQ", "length": 340, "header": "tr|F1SBJ3-1|A0A5G2QKW6_PIG Computationally mapped isoform of Arginine-hydroxylase NDUFAF5, mitochondrial OS=Sus scrofa OX=9823 GN=NDUFAF5 PE=1 SV=3 CANONICAL=A0A5G2QKW6-1" }, "locus": { "chromosome": "17", "start_pos": 22508778, "end_pos": 22480388, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007747.4", "url": "https://www.ensembl.org/id/ENSSSCT00000007747.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007538.3", "url": "https://www.ensembl.org/id/ENSSSCP00000007538.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMD7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMD7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100520522", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520522", "resource": "KEGG Pathway" }, { "id": "R-SSC-6799198", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6799198", "resource": "Reactome", "description": "Complex I biogenesis" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Z4G2-1", "protein_name": "Arginine-hydroxylase NDUFAF5, mitochondrial", "gene_name": "NDUFAF5", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAARALWRPGLPVPRGCGRLWAQPGRAAAAVAPPPPSGASPGARSPFDRRLKRKQKNWAALRPRPAECEYLRDEVGSGVADRVLDIPRTFPLALDLGSGRGYIARHLNQEVIEKLVQVDIAENVFKSTSESEIPTVSVVADEECLPFKENTFDLVVSSLSLHWVNDLPKAFREIHQVLKPDGVFIGAMFGGDTLYELRCSLQLAELEREGGFSPHVSPFVAVSDLGHLLSRAGFNTLTVDTDEIQVNYPGLFEVMEDLQGMGESNCSWNRKPLLHRDTMLAAAAIYQEMYGNSDGSVPATFQIFYMIGWKFHESQAKPAQRGSATVSLGDLAKIDKLLHQK", "length": 342 }, "evidence": [ { "id": "A0A5G2QKW6", "url": "https://omabrowser.org/oma/group/A0A5G2QKW6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A2APY7-1", "protein_name": "Arginine-hydroxylase NDUFAF5, mitochondrial", "gene_name": "Ndufaf5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLRKVVLLRLCPLLGRPAVSASSGSRREVASGVPPSGSTSPRALNIFDRELKRKQKNWAARQPDPMKFDYLKEEVGSRIADRVYDIARDFPLALDIGCGRGYIAQHLDKETVGKIFQTDIAEHALKNSLETDIPTVNILADEEFLPFQENTFDLVVSSLSLHWVNDLPRALEQIHYVLKPDGVFVGAMFGGDTLYELRCSLQLAETEREGGFSPHISPFTAVNDLGHLLGRAGFNTLTVDTDEIQVNYPGMFELMEDLKGMGESNCSWNRKALLHRDTMLAAAAVYREMYRNEDGSIPATFQIYHMIGWKYHDSQARPAERGSATVSFGELAKLNDVMSHEKK", "length": 343 }, "evidence": [ { "id": "A0A5G2QKW6", "url": "https://omabrowser.org/oma/group/A0A5G2QKW6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B2GV71-1", "protein_name": "Arginine-hydroxylase NDUFAF5, mitochondrial", "gene_name": "Ndufaf5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLRRVVLSRLYARLGGPAVSAGRGGRRGVASSVPPSGSTSPRALNIFDRELKRKQKNWAARQPEPMKFDYLKEEIGSRIADRVYDIARDFPLALDIGCGRGYIAQHLNKETVGKIFQTDIAEHALKNSIETDIPTVNILADEEFLPFPENTFDLVVSSLSLHWVNDLPRALEQIHYVLKPDGVFVGAMFGGDTLYELRCSLQLAETEREGGFSPHISPFTAVNDLGHLLGRAGFNTLTVDTDEIQVNYPGMFELMEDLKGMGESNCSWNRKALLHRDTMLAAAAVYREMYSNEDGSIPATYQIYHMIGWKYHDSQARPAERGSATVSFGDLARLNDTMSQGKK", "length": 343 }, "evidence": [ { "id": "A0A5G2QKW6", "url": "https://omabrowser.org/oma/group/A0A5G2QKW6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1MQP4-1", "protein_name": "Arginine-hydroxylase NDUFAF5, mitochondrial", "gene_name": "NDUFAF5", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPLLTPLRFSWRRLPAAGVPVKNLGLRTVASGASSPSGASPKAFNIFDRDLKRKQKNWAARQPEPMKFDYLKEEVGSRIADRVYDIARDFRLALDVGCGRGYVAEHLNKETVGKFFQTDIAENALKNALETEIPTVSVLADEEFLPFRENTFDLVVSSLSLHWVNDLPRALEQIHYVLKPDGVFIGAMFGGDTLFELRCSLQLAETEREGGFSPHVSPFTAVNDLGHLLGRAGFNTLTVDTDEIQVNYPGMFELMEDLQGMGESNCAWNRKALLHRDTMLAAAAVYQEMYRNEDGSVPATYQIYYMIGWKYHDSQARPAERGSATVSFGELGKINDLMSQGKKSQ", "length": 345 }, "evidence": [ { "id": "A0A5G2QKW6", "url": "https://omabrowser.org/oma/group/A0A5G2QKW6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "O80543-1", "protein_name": "Putative methyltransferase At1g22800, mitochondrial", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MRRINSLYGRIGLLKRVPEKSTKQAHTFLASLSFSTEGAYGGDGEFQQNSSKVKIFDRDLKRIHRDRAAWLSRQKNDSFVDAVADNLLDRLEDCKKSFPTAFCLGGSLGAVKRLLRGRGGIEKLIMMDTSYDMIKSCRDAQDDSLDNSIETSYFVGDEEFLPVKESSVDLIISSLGLHWTNDLPGSMIQCKLALKPDGLFLAAILGGETLKELRIACTLAHMEREGGISPRLSPLAQVRDAGNLLTRAGFSLPGVDVDEYVVKYKRAMDLIEHLRAMGETNALLERNKILNRETAVATAAIYDSMFATEDGTIPATFQVIYMTGWREHSSHPQAKRRGSATVSFTDLQKQFGGQS", "length": 355 }, "evidence": [ { "id": "A0A5G2QKW6", "url": "https://omabrowser.org/oma/group/A0A5G2QKW6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5TEU4-1", "protein_name": "Arginine-hydroxylase NDUFAF5, mitochondrial", "gene_name": "NDUFAF5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLRPAGLWRLCRRPWAARVPAENLGRREVTSGVSPRGSTSPRTLNIFDRDLKRKQKNWAARQPEPTKFDYLKEEVGSRIADRVYDIPRNFPLALDLGCGRGYIAQYLNKETIGKFFQADIAENALKNSSETEIPTVSVLADEEFLPFKENTFDLVVSSLSLHWVNDLPRALEQIHYILKPDGVFIGAMFGGDTLYELRCSLQLAETEREGGFSPHISPFTAVNDLGHLLGRAGFNTLTVDTDEIQVNYPGMFELMEDLQGMGESNCAWNRKALLHRDTMLAAAAVYREMYRNEDGSVPATYQIYYMIGWKYHESQARPAERGSATVSFGELGKINNLMPPGKKSQ", "length": 345 }, "evidence": [ { "id": "A0A5G2QKW6", "url": "https://omabrowser.org/oma/group/A0A5G2QKW6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "methyltransferase activity", "id": "GO:0008168", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008168", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKW6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW6" } ], "pmid": "" }, { "name": "oxidoreductase activity", "id": "GO:0016491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016491", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKW6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW6" } ], "pmid": "" }, { "name": "S-adenosylmethionine-dependent methyltransferase activity", "id": "GO:0008757", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008757", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKW6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKW6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW6" } ], "pmid": "" }, { "name": "mitochondrial respiratory chain complex I assembly", "id": "GO:0032981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032981", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKW6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKW6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW6" } ], "pmid": "" }, { "name": "matrix side of mitochondrial inner membrane", "id": "GO:0099617", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099617", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKW6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QKW6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 345, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QKW6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QKW6" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QKW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW6" }, { "id": "PF08241", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08241" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Methyltransferase type 11", "eco_id": "ECO_0000259", "start_pos": 94, "end_pos": 185, "start_aa": "Leu", "end_aa": "Ile", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QJE4-1", "uniprot_ac": "A0A5G2QJE4", "uniprot_id": "A0A5G2QJE4_PIG", "mass": { "chemical_mass": 99208.0, "monoisotopic_mass": 99208.0 }, "refseq": {}, "gene_names": [ { "name": "EPS8L2", "type": "recommended", "evidence": [ { "id": "A0A5G2QJE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE4" } ] } ], "protein_names": [ { "name": "Epidermal growth factor receptor kinase substrate 8-like protein 2", "type": "recommended", "evidence": [ { "id": "A0A5G2QJE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE4/entry#names_and_taxonomy" } ] }, { "name": "Epidermal growth factor receptor pathway substrate 8-related protein 2", "type": "synonym", "evidence": [ { "id": "A0A5G2QJE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE4/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Stimulates guanine exchange activity of SOS1. May play a role in membrane ruffling and remodeling of the actin cytoskeleton. In the cochlea, is required for stereocilia maintenance in adult hair cells.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R9L8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9L8#function" }, { "database": "UniProtKB", "id": "ARBA00057110", "url": "https://www.uniprot.org/uniprotkb/ARBA00057110#function" }, { "database": "UniProtKB", "id": "A0A5G2QJE4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE4#function" }, { "database": "UniProtKB", "id": "A0A286ZVR9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZVR9#function" }, { "database": "UniProtKB", "id": "A0A287AJ57", "url": "https://www.uniprot.org/uniprotkb/A0A287AJ57#function" }, { "database": "UniProtKB", "id": "F1RYY5", "url": "https://www.uniprot.org/uniprotkb/F1RYY5#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJE4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "EPS8L2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE4", "locus": { "chromosome": "2", "start_pos": 452630, "end_pos": 433649, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000012848", "url": "https://www.ensembl.org/id/ENSSSCG00000012848" } ] } } ], "crossref": [ { "id": "A0A5G2QJE4", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QJE4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000012848", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000012848", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd01210", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01210", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd09540", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd09540", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd11764", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd11764", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "110259209", "url": "https://www.ncbi.nlm.nih.gov/gene/110259209", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006020", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006020", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013625", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013625", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013761", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013761", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR033928", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033928", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035462", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035462", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036028", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036028", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039801", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039801", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041418", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041418", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055093", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055093", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:110259209", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110259209", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1RYY5", "url": "https://www.orthodb.org/?gene=F1RYY5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12287", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12287", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12287:SF20", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12287:SF20", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00018", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00018", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08416", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08416", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18016", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18016", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22975", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22975", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZVR9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZVR9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZVR9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZVR9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AJ57", "url": "https://www.uniprot.org/uniprotkb/A0A287AJ57", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AJ57-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AJ57-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJE4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJE4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9L8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9L8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9L8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9L8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RYY5", "url": "https://www.uniprot.org/uniprotkb/F1RYY5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RYY5-1", "url": "https://www.uniprot.org/uniprotkb/F1RYY5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGSAPGPGAPEPGPHLAGAGLTSAGSTPPLGAHSSPATEGSQRPVRRGPGHPFELRGTGSPARPRVQGARLQVWGLRRWLWGPSGRARVRAGQPRPAPAPAQCPPARGDSNLPLRFLPAPRPGSSARPSRLPSSAPTDRRTERGGGDQRAARRRATRSRCGPGTKPWTRATLSSALSPPATVEDTMSQAGSVSCCPGAANGSLGRSDGVAKMSAKDLFAQRKKYSNSNVIMHETSQYHVQHLATFIMDKSEAIASVDDAIRKLVHLSSKEKIWTQEMLLQVNDQSLRLLDVESQEELENFPLPTVRHSQTVLNQLRYPSVLLLVCQDSDQSKPDVHFFHCDQVEAELVHEDIESALADCRLGKKMRPQTLKGHQEKIRQRLSVLPPPQGPAPIPFQRHGGDAPSTKNRVGLPVPLSEPGIHRRESLEEEPRALLAQKIEKETQILNCALDDIEWFVARLQKAAEAFKQLNQRKKGKKKGKKGPAEGVLTLRARPPSEAEFVDCFQKIKLAINLLAKLQKHIQNPSAAELVHFLFGPLDLIVSTCGGPDIARSVSSPLLSRDTVGFLRGHLVPKEMALWESLGETWTRPRSEWPREPQVRPYVPKFHSGWEPPLDVLQEAPWEVEGLAPAPVDEPAPGGRPSFRNSPKHGPISEPAPQGDVLPPVSSPQAHRGYEPVQTMAKYVQVLYDFTARNANELSVLKDEVLEVLEDGHQWWKLRNRSGQAGYVPSNILIRLEEVPAEQASLKYWGPASPTHKLPPGFAGNKDELIHYMDEVNDELLKKISHIRTQPQRHFRVERSQPVHLPLTYESGPREVRAWLEAKAFSPRIVENLGILTGPQLFSLNKDELRKVCGEEGARVYSQLTVQKAVLEKQHSGSELEEVMSKFHSKTQRRAEEDS", "length": 898, "header": "tr|A0A5G2QJE4-1|A0A5G2QJE4_PIG Isoform 1 of Epidermal growth factor receptor kinase substrate 8-like protein 2 OS=Sus scrofa OX=9823 GN=EPS8L2 PE=1 SV=1 CANONICAL=A0A5G2QJE4-1" }, "isoforms": [ { "isoform_ac": "A0A286ZVR9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZVR9/entry", "sequence": { "sequence": "AHGPTDIHQGGTLSHLATFIMDKSEAIASVDDAIRKLVHLSSKEKIWTQEMLLQVNDQSLRLLDVESQEELENFPLPTVRHSQTVLNQLRYPSVLLLVCQDSDQSKPDVHFFHCDQVEAELVHEDIESALADCRLGKKMRPQTLKGHQEKIRQRLSVLPPPQGPAPIPFQRHGGDAPSTKNRVGLPVPLSEPGIHRRESLEEEPRALLAQKIEKETQILNCALDDIEWFVARLQKAAEAFKQLNQRKKGKKKGKKGPAEGVLTLRARPPSEAEFVDCFQKIKLAINLLAKLQKHIQNPSAAELVHFLFGPLDLIVSTCGGPDIARSVSSPLLSRDTVGFLRGHLVPKEMALWESLGETWTRPRSEWPREPQVRPYVPKFHSGWEPPLDVLQEAPWEVEGLAPAPVDEPAPGGRPSFRNSPKHGPISEPAPQGDVLPPVSSPQAHRGYEPVQTMAKYVQVLYDFTARNANELSVLKDEVLEVLEDGHQWWKLRNRSGQAGYVPSNILIRLEEVPAEQASLKYWGPASPTHKLPPGFAGNKDELIHYMDEVNDELLKKISHIRTQPQRHFRVERSQPVHLPLTYESGPREVRAWLEAKAFSPRIVENLGILTGPQLFSLNKDELRKVCGEEGARVYSQLTVQKAVLEKQHSGSELEEVMSKFHSKTQRRAEEDS", "length": 672, "header": "tr|A0A286ZVR9-1|A0A5G2QJE4_PIG Computationally mapped isoform of Epidermal growth factor receptor kinase substrate 8-like protein 2 OS=Sus scrofa OX=9823 GN=EPS8L2 PE=1 SV=2 CANONICAL=A0A5G2QJE4-1" }, "locus": { "chromosome": "2", "start_pos": 451826, "end_pos": 445906, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054882.2", "url": "https://www.ensembl.org/id/ENSSSCT00000054882.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035585.2", "url": "https://www.ensembl.org/id/ENSSSCP00000035585.2" } ] } }, { "isoform_ac": "A0A287AJ57-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AJ57/entry", "sequence": { "sequence": "MVLVCPGDSGQATRAPAPGSGVGGGGAPGPMLRVARRWPGPDEVSARLPCPLRCGPGTKPWTRATLSSALSPPATVEDTMSQAGSVSCCPGAANGSLGRSDGVAKMSAKDLFAQRKKYSNSNVIMHETSQYHVQHLATFIMDKSEAIASVDDAIRKLVHLSSKEKIWTQEMLLQVNDQSLRLLDVESQEELENFPLPTVRHSQTVLNQLRYPSVLLLVCQDSDQSKPDVHFFHCDQVEAELVHEDIESALADCRLGKKMRPQTLKGHQEKIRQRLSVLPPPQGPAPIPFQRHGGDAPSTKNRVGLPVPLSEPGIHRRESLEEEPRALLAQKIEKETQILNCALDDIEWFVARLQKAAEAFKQLNQRKKGKKKGKKGPAEGVLTLRARPPSEAEFVDCFQKIKLAINLLAKLQKHIQNPSAAELVHFLFGPLDLIVSTCGGPDIARSVSSPLLSRDTVGFLRGHLVPKEMALWESLGETWTRPRSEWPREPQVRPYVPKFHSGWEPPLDVLQEAPWEVEGLAPAPVDEPAPGGRPSFRNSPKHGPISEPAPQGDVLPPVSSPQAHRGYEPVQTMAKYVQVLYDFTARNANELSVLKDEVLEVLEDGHQWWKLRNRSGQAGYVPSNILIRLEEVPAEQASLKYWGPASPTHKLPPGFAGNKDELIHYMDEVNDELLKKISHIRTQPQRHFRVERSQPVHLPLTYESGPREVRAWLEAKAFSPRIVENLGILTGPQLFSLNKDELRKVCGEEGARVYSQLTVQKAVLEKQHSGSELEEVMSKFHSKTQRRAEEDS", "length": 792, "header": "tr|A0A287AJ57-1|A0A5G2QJE4_PIG Computationally mapped isoform of Epidermal growth factor receptor kinase substrate 8-like protein 2 OS=Sus scrofa OX=9823 GN=EPS8L2 PE=1 SV=1 CANONICAL=A0A5G2QJE4-1" }, "locus": { "chromosome": "2", "start_pos": 451826, "end_pos": 437650, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063658.2", "url": "https://www.ensembl.org/id/ENSSSCT00000063658.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043920.2", "url": "https://www.ensembl.org/id/ENSSSCP00000043920.2" } ] } }, { "isoform_ac": "A0A5G2QJE4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE4/entry", "sequence": { "sequence": "MGSAPGPGAPEPGPHLAGAGLTSAGSTPPLGAHSSPATEGSQRPVRRGPGHPFELRGTGSPARPRVQGARLQVWGLRRWLWGPSGRARVRAGQPRPAPAPAQCPPARGDSNLPLRFLPAPRPGSSARPSRLPSSAPTDRRTERGGGDQRAARRRATRSRCGPGTKPWTRATLSSALSPPATVEDTMSQAGSVSCCPGAANGSLGRSDGVAKMSAKDLFAQRKKYSNSNVIMHETSQYHVQHLATFIMDKSEAIASVDDAIRKLVHLSSKEKIWTQEMLLQVNDQSLRLLDVESQEELENFPLPTVRHSQTVLNQLRYPSVLLLVCQDSDQSKPDVHFFHCDQVEAELVHEDIESALADCRLGKKMRPQTLKGHQEKIRQRLSVLPPPQGPAPIPFQRHGGDAPSTKNRVGLPVPLSEPGIHRRESLEEEPRALLAQKIEKETQILNCALDDIEWFVARLQKAAEAFKQLNQRKKGKKKGKKGPAEGVLTLRARPPSEAEFVDCFQKIKLAINLLAKLQKHIQNPSAAELVHFLFGPLDLIVSTCGGPDIARSVSSPLLSRDTVGFLRGHLVPKEMALWESLGETWTRPRSEWPREPQVRPYVPKFHSGWEPPLDVLQEAPWEVEGLAPAPVDEPAPGGRPSFRNSPKHGPISEPAPQGDVLPPVSSPQAHRGYEPVQTMAKYVQVLYDFTARNANELSVLKDEVLEVLEDGHQWWKLRNRSGQAGYVPSNILIRLEEVPAEQASLKYWGPASPTHKLPPGFAGNKDELIHYMDEVNDELLKKISHIRTQPQRHFRVERSQPVHLPLTYESGPREVRAWLEAKAFSPRIVENLGILTGPQLFSLNKDELRKVCGEEGARVYSQLTVQKAVLEKQHSGSELEEVMSKFHSKTQRRAEEDS", "length": 898, "header": "tr|A0A5G2QJE4-1|A0A5G2QJE4_PIG Isoform 1 of Epidermal growth factor receptor kinase substrate 8-like protein 2 OS=Sus scrofa OX=9823 GN=EPS8L2 PE=1 SV=1 CANONICAL=A0A5G2QJE4-1" }, "locus": { "chromosome": "2", "start_pos": 451826, "end_pos": 434947, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067073.2", "url": "https://www.ensembl.org/id/ENSSSCT00000067073.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064057.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064057.1" } ] } }, { "isoform_ac": "A0A5G2R9L8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9L8/entry", "sequence": { "sequence": "MRAPCSVAFGSGPMHTCGLEARWGRPPAYPRWAFGRAPHPACRQRAPRCGPGTKPWTRATLSSALSPPATVEDTMSQAGSVSCCPGAANGSLGRSDGVAKMSAKDLFAQRKKYSNSNVIMHETSQYHVQHLATFIMDKSEAIASVDDAIRKLVHLSSKEKIWTQEMLLQVNDQSLRLLDVESQEELENFPLPTVRHSQTVLNQLRYPSVLLLVCQDSDQSKPDVHFFHCDQVEAELVHEDIESALADCRLGKKMRPQTLKGHQEKIRQRLSVLPPPQGPAPIPFQRHGGDAPSTKNRVGLPVPLSEPGIHRRESLEEEPRALLAQKIEKETQILNCALDDIEWFVARLQKAAEAFKQLNQRKKGKKKGKKGPAEGVLTLRARPPSEAEFVDCFQKIKLAINLLAKLQKHIQNPSAAELVHFLFGPLDLIVSTCGGPDIARSVSSPLLSRDTVGFLRGHLVPKEMALWESLGETWTRPRSEWPREPQVRPYVPKFHSGWEPPLDVLQEAPWEVEGLAPAPVDEPAPGGRPSFRNSPKHGPISEPAPQGDVLPPVSSPQAHRGYEPVQTMAKYVQVLYDFTARNANELSVLKDEVLEVLEDGHQWWKLRNRSGQAGYVPSNILIRLEEVPAEQASLKYWGPASPTHKLPPGFAGNKDELIHYMDEVNDELLKKISHIRTQPQRHFRVERSQPVHLPLTYESGPREVRAWLEAKAFSPRIVENLGILTGPQLFSLNKDELRKVCGEEGARVYSQLTVQKAVLEKQHSGSELEEVMSKFHSKTQRRAEEDS", "length": 787, "header": "tr|A0A5G2R9L8-1|A0A5G2QJE4_PIG Computationally mapped isoform of Epidermal growth factor receptor kinase substrate 8-like protein 2 OS=Sus scrofa OX=9823 GN=EPS8L2 PE=1 SV=1 CANONICAL=A0A5G2QJE4-1" }, "locus": { "chromosome": "2", "start_pos": 451826, "end_pos": 433715, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090959.1", "url": "https://www.ensembl.org/id/ENSSSCT00000090959.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073014.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073014.1" } ] } }, { "isoform_ac": "F1RYY5-1", "url": "https://www.uniprot.org/uniprotkb/F1RYY5/entry", "sequence": { "sequence": "MSQAGSVSCCPGAANGSLGRSDGVAKMSAKDLFAQRKKYSNSNVIMHETSQYHVQHLATFIMDKSEAIASVDDAIRKLVHLSSKEKIWTQEMLLQVNDQSLRLLDVESQEELENFPLPTVRHSQTVLNQLRYPSVLLLVCQDSDQSKPDVHFFHCDQVEAELVHEDIESALADCRLGKKMRPQTLKGHQEKIRQRLSVLPPPQGPAPIPFQRHGGDAPSTKNRVGLPVPLSEPGIHRRESLEEEPRALLAQKIEKETQILNCALDDIEWFVARLQKAAEAFKQLNQRKKGKKKGKKGPAEGVLTLRARPPSEAEFVDCFQKIKLAINLLVSATAPPPSELTLGGGPGATAFCLPAPCPQAKLQKHIQNPSAAELVHFLFGPLDLIVSTCGGPDIARSVSSPLLSRDTVGFLRGHLVPKEMALWESLGETWTRPRSEWPREPQVRPYVPKFHSGWEPPLDVLQEAPWEVEGLAPAPVDEPAPGGRPSFRNSPKHGPISEPAPQGDVLPPVSSPQAHRGYEPVQTMAKYVQVLYDFTARNANELSVLKDEVLEVLEDGHQWWKLRNRSGQAGYVPSNILIRLEEVPAEQASLKYWGPASPTHKLPPGFAGNKDELIHYMDEVNDELLKKISHIRTQPQRHFRVERSQPVHLPLTYESGPREVRAWLEAKAFSPRIVENLGILTGPQLFSLNKDELRKVCGEEGARVYSQLTVQKAVLEKQHSGSELEEVMSKFHSKTQRRAEEDS", "length": 743, "header": "tr|F1RYY5-1|A0A5G2QJE4_PIG Computationally mapped isoform of Epidermal growth factor receptor kinase substrate 8-like protein 2 OS=Sus scrofa OX=9823 GN=EPS8L2 PE=1 SV=2 CANONICAL=A0A5G2QJE4-1" }, "locus": { "chromosome": "2", "start_pos": 451826, "end_pos": 437887, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014043.4", "url": "https://www.ensembl.org/id/ENSSSCT00000014043.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000013658.3", "url": "https://www.ensembl.org/id/ENSSSCP00000013658.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R9L8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9L8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:110259209", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110259209", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJE4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE4" } ], "pmid": "" }, { "name": "stereocilium", "id": "GO:0032420", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032420", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJE4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE4" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJE4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE4" } ], "pmid": "" }, { "name": "ruffle membrane", "id": "GO:0032587", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032587", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJE4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE4" } ], "pmid": "" }, { "name": "protein-containing complex", "id": "GO:0032991", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032991", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJE4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE4" } ], "pmid": "" }, { "name": "stereocilium tip", "id": "GO:0032426", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032426", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJE4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "actin binding", "id": "GO:0003779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003779", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJE4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE4" } ], "pmid": "" }, { "name": "guanyl-nucleotide exchange factor activity", "id": "GO:0005085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005085", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJE4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "Rho protein signal transduction", "id": "GO:0007266", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007266", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJE4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE4" } ], "pmid": "" }, { "name": "regulation of Rho protein signal transduction", "id": "GO:0035023", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035023", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJE4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE4" } ], "pmid": "" }, { "name": "sensory perception of sound", "id": "GO:0007605", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007605", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJE4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE4" } ], "pmid": "" }, { "name": "positive regulation of ruffle assembly", "id": "GO:1900029", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900029", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJE4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 200, "end_pos": 202, "annotation": "n_glycosylation_sequon" }, { "start_pos": 719, "end_pos": 721, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QJE4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 898, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QJE4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QJE4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QJE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE4" }, { "id": "PS50002", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50002" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SH3", "eco_id": "ECO_0000259", "start_pos": 678, "end_pos": 737, "start_aa": "Thr", "end_aa": "Glu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QHD9-1", "uniprot_ac": "A0A5G2QHD9", "uniprot_id": "A0A5G2QHD9_PIG", "mass": { "chemical_mass": 74951.0, "monoisotopic_mass": 74951.0 }, "refseq": {}, "gene_names": [ { "name": "FUBP3", "type": "recommended", "evidence": [ { "id": "A0A5G2QHD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHD9" } ] } ], "protein_names": [ { "name": "Far upstream element binding protein 3", "type": "synonym", "evidence": [ { "id": "A0A5G2QHD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHD9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHD9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "FUBP3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHD9", "locus": { "chromosome": "1", "start_pos": 270702918, "end_pos": 270652450, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005702", "url": "https://www.ensembl.org/id/ENSSSCG00000005702" } ] } } ], "crossref": [ { "id": "A0A5G2QHD9", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QHD9", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000005702", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005702", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd22480", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22480", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd22483", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22483", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd22486", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22486", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd22489", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22489", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100524188", "url": "https://www.ncbi.nlm.nih.gov/gene/100524188", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004088", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004088", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036612", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036612", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "F1S0X8", "url": "https://www.orthodb.org/?gene=F1S0X8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10288", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10288", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00013", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00013", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZXF7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZXF7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZXF7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZXF7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AVF4", "url": "https://www.uniprot.org/uniprotkb/A0A287AVF4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AVF4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AVF4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9P6", "url": "https://www.uniprot.org/uniprotkb/A0A287B9P6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9P6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9P6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QHD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHD9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QHD9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHD9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S0X8", "url": "https://www.uniprot.org/uniprotkb/F1S0X8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S0X8-1", "url": "https://www.uniprot.org/uniprotkb/F1S0X8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAGLRRVHRDGTAASRAGPAHAPAAPPPLPAGPRSRARTPAQQTRLLSRRRASWLLFRRKWGDFPFPATGPQAELEAGQGSPVAAVAAAAAAVGAVMAELVQGQSAPVGMKAEGFVDALHRVRQIAAKIDSIPHLNNSTPLVDPSVYGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDVDGSSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRGDFSSRMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHVISELILTAQERDGFGGLAVARGRGRGRGDWSVGTPGGIQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPGLRVFTIRGVPQQIEVARHLIDEKVGGSGLGAPGAFGQSPFSQPPAAPHQNTFPPRSSGCFPNIAAKVNGNPHGAPVSGPPAFLTQGWGSTYQAWQQPAQQVPSKCLGEWARSPADRPRAPIPRGAPAPPGGAGGVQLASSDLSFLLRRPPHPCSHRWVQEACGPKGEDGPEPLPSSPSSPQAAPPIGCPRGGLLPLLCPAPPQGGSFLSPAPGDSTP", "length": 714, "header": "tr|A0A5G2QHD9-1|A0A5G2QHD9_PIG Isoform 1 of Far upstream element binding protein 3 OS=Sus scrofa OX=9823 GN=FUBP3 PE=1 SV=1 CANONICAL=A0A5G2QHD9-1" }, "isoforms": [ { "isoform_ac": "A0A286ZXF7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZXF7/entry", "sequence": { "sequence": "MAGLRRVHRDGTAASRAGPAHAPAAPPPLPAGPRSRARTPAQQTRLLSRRRASWLLFRRKWGDFPFPATGPQAELEAGQGSPVAAVAAAAAAVGAVMAELVQGQSAPVGMKAEGFVDALHRVRQIAAKIDSIPHLNNSTPLVDPSVYGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDVDGSSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRGDFSSRMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHVISELILTAQERDGFGGLAVARGRGRGRGDWSVGTPGGIQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPGLRVFTIRGVPQQIEVARHLIDEKVGGSGLGAPGAFGQSPFSQPPAAPHQNTFPPRSSGCFPNIAAKVNGNPHGAPVSGPPAFLTQGWGSTYQAWQQPAQQVPSQQSQPQSSQPDYSKAWEDYYKKQSHAASAAPQASSPPDYTMAWAEYYRQQVAFYGQTLGQAQAHSQVCSPSPAPRAHPDQP", "length": 681, "header": "tr|A0A286ZXF7-1|A0A5G2QHD9_PIG Computationally mapped isoform of Far upstream element binding protein 3 OS=Sus scrofa OX=9823 GN=FUBP3 PE=1 SV=2 CANONICAL=A0A5G2QHD9-1" }, "locus": { "chromosome": "1", "start_pos": 270700691, "end_pos": 270652450, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045111.2", "url": "https://www.ensembl.org/id/ENSSSCT00000045111.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036203.2", "url": "https://www.ensembl.org/id/ENSSSCP00000036203.2" } ] } }, { "isoform_ac": "A0A287AVF4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AVF4/entry", "sequence": { "sequence": "MAGLRRVHRDGTAASRAGPAHAPAAPPPLPAGPRSRARTPAQQTRLLSRRRASWLLFRRKWGDFPFPATGPQAELEAGQGSPVAAVAAAAAAVGAVMAELVQGQSAPVGMKAEGFVDALHRVRQIAAKIDSIPHLNNSTPLVDPSVYGYGVQKRPLDDGGKLLAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDVDGSSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRGDFSSRMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPGCVGPRRKPVLGPVAESVTRALLPSQERDGFGGLAVARGRGRGRGDWSVGTPGGIQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPGLRVFTIRGVPQQIEVARHLIDEKVGGSGLGAPGAFGQSPFSQPPAAPHQNTFPPRSSGCFPNIAAKVNGNPHGAPVSGPPAFLTQGWGSTYQAWQQPAQQVPSKCLGEWARSPADRPRAPIPRGAPAPPGGAGGVQLASSDLSFLLRRPPHPCSHRWVQEACGPKGEDGPEPLPSSPSSPQAAPPIGCPRGGLLPLLCPAPPQGGSFLSPAPGDSTP", "length": 698, "header": "tr|A0A287AVF4-1|A0A5G2QHD9_PIG Computationally mapped isoform of Far upstream element binding protein 3 OS=Sus scrofa OX=9823 GN=FUBP3 PE=1 SV=2 CANONICAL=A0A5G2QHD9-1" }, "locus": { "chromosome": "1", "start_pos": 270697154, "end_pos": 270652450, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061783.2", "url": "https://www.ensembl.org/id/ENSSSCT00000061783.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047898.2", "url": "https://www.ensembl.org/id/ENSSSCP00000047898.2" } ] } }, { "isoform_ac": "A0A287B9P6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9P6/entry", "sequence": { "sequence": "MVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDVDGSSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRGDFSSRMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPGCVGPRRKPVLGPVAESVTRALLPSQERDGFGGLAVARGRGRGRGDWSVGTPGGIQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPGLRVFTIRGVPQQIEVARHLIDEKVGGSGLGAPGAFGQSPFSQPPAAPHQNTFPPRSSGCFPNIAAKVNGNPHGAPVSGPPAFLTQGWGSTYQAWQQPAQQVPSQQSQPQSSQPDYSKAWEDYYKKQSHAASAAPQASSPPDYTMAWAEYYRQQVAFYGQTLGQAQAHSQVCSPSPAPRAHPDQP", "length": 490, "header": "tr|A0A287B9P6-1|A0A287B9P6_PIG Computationally mapped isoform of Far upstream element binding protein 3 OS=Sus scrofa OX=9823 GN=FUBP3 PE=1 SV=3 CANONICAL=A0A5G2QHD9-1" }, "locus": { "chromosome": "1", "start_pos": 270700691, "end_pos": 270678048, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046254.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046254.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053054.3", "url": "https://www.ensembl.org/id/ENSSSCP00000053054.3" } ] } }, { "isoform_ac": "A0A5G2QHD9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHD9/entry", "sequence": { "sequence": "MAGLRRVHRDGTAASRAGPAHAPAAPPPLPAGPRSRARTPAQQTRLLSRRRASWLLFRRKWGDFPFPATGPQAELEAGQGSPVAAVAAAAAAVGAVMAELVQGQSAPVGMKAEGFVDALHRVRQIAAKIDSIPHLNNSTPLVDPSVYGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDVDGSSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRGDFSSRMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHVISELILTAQERDGFGGLAVARGRGRGRGDWSVGTPGGIQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPGLRVFTIRGVPQQIEVARHLIDEKVGGSGLGAPGAFGQSPFSQPPAAPHQNTFPPRSSGCFPNIAAKVNGNPHGAPVSGPPAFLTQGWGSTYQAWQQPAQQVPSKCLGEWARSPADRPRAPIPRGAPAPPGGAGGVQLASSDLSFLLRRPPHPCSHRWVQEACGPKGEDGPEPLPSSPSSPQAAPPIGCPRGGLLPLLCPAPPQGGSFLSPAPGDSTP", "length": 714, "header": "tr|A0A5G2QHD9-1|A0A5G2QHD9_PIG Isoform 1 of Far upstream element binding protein 3 OS=Sus scrofa OX=9823 GN=FUBP3 PE=1 SV=1 CANONICAL=A0A5G2QHD9-1" }, "locus": { "chromosome": "1", "start_pos": 270697154, "end_pos": 270652450, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080667.2", "url": "https://www.ensembl.org/id/ENSSSCT00000080667.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061428.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061428.1" } ] } }, { "isoform_ac": "F1S0X8-1", "url": "https://www.uniprot.org/uniprotkb/F1S0X8/entry", "sequence": { "sequence": "MAELVQGQSAPVGMKAEGFVDALHRVRQIAAKIDSIPHLNNSTPLVDPSVYGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDVDGSSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRGDFSSRMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHVISELILTAQERDGFGGLAVARGRGRGRGDWSVGTPGGIQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPGLRVFTIRGVPQQIEVARHLIDEKVGGSGLGAPGAFGQSPFSQPPAAPHQNTFPPRSSGCFPNIAAKVNGNPHGAPVSGPPAFLTQGWGSTYQAWQQPAQQVPSHAASAAPQASSPPDYTMAWAEYYRQQVAFYGQTLGQAQAHSQEQ", "length": 548, "header": "tr|F1S0X8-1|A0A5G2QHD9_PIG Computationally mapped isoform of Far upstream element binding protein 3 OS=Sus scrofa OX=9823 GN=FUBP3 PE=1 SV=5 CANONICAL=A0A5G2QHD9-1" }, "locus": { "chromosome": "1", "start_pos": 270701575, "end_pos": 270652738, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000006271.5", "url": "https://www.ensembl.org/id/ENSSSCT00000006271.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000006109.5", "url": "https://www.ensembl.org/id/ENSSSCP00000006109.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S0X8", "url": "https://www.uniprot.org/uniprotkb/F1S0X8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHD9" } ], "pmid": "" }, { "name": "mRNA 3'-UTR binding", "id": "GO:0003730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003730", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHD9" } ], "pmid": "" }, { "name": "single-stranded DNA binding", "id": "GO:0003697", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003697", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHD9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHD9" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHD9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHD9" } ], "pmid": "" }, { "name": "positive regulation of gene expression", "id": "GO:0010628", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010628", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHD9" } ], "pmid": "" }, { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHD9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 136, "end_pos": 138, "annotation": "n_glycosylation_sequon" }, { "start_pos": 137, "end_pos": 139, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], 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AMN1 homolog OS=Sus scrofa OX=9823 GN=AMN1 PE=3 SV=1 CANONICAL=A0A5G2QIE4-1" }, "isoforms": [ { "isoform_ac": "A0A287A4G5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A4G5/entry", "sequence": { "sequence": "DCLWLDFGGPGTVEEVPEGRYDALPGAGQSAPGPILHPEVQTLDLRSCDISDTALLHLCNCRKLKKLNLNSSKENRISITSKGIKAVASSCSYLHEASLKRCCNLTDEGVLALALNCRLLKIIDLGGCLGITDVSLQALGENCPLLQCVDFSATQVSDSGVVALVRGPCAKKLEEIHMGHCVNLTDEAVEAVLTCCPQICILLFHGCPLITDHSRVVLEQLVGPNKLKQVTWTVY", "length": 235, "header": "tr|A0A287A4G5-1|A0A5G2QIE4_PIG Computationally mapped isoform of Protein AMN1 homolog OS=Sus scrofa OX=9823 GN=AMN1 PE=3 SV=2 CANONICAL=A0A5G2QIE4-1" }, "locus": { "chromosome": "5", "start_pos": 42565998, "end_pos": 42518656, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054232.2", "url": "https://www.ensembl.org/id/ENSSSCT00000054232.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038668.2", "url": "https://www.ensembl.org/id/ENSSSCP00000038668.2" } ] } }, { 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"Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VQI1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VQI1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "B8JKV0-1", "protein_name": "Protein AMN1 homolog", "gene_name": "Amn1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5U201-1", "protein_name": "Protein AMN1 homolog", "gene_name": "Amn1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPSSRVVSQLLELCLRCLIINISRYISDIKYLPPNIKDRLIKIMSMRGRITDSNINEVLHPEVQRLDLRSCNISDVALQHLCKCRKLKALNLKSCREHRNSITSEGIKAVASSCSDLHEISLKGCCSVTDEGVLALALNCQLLKIIDLGGCLSITDESLHALGKNCPFLQCVDFSTTQVSDNGVVALVSGPCAKQLEEINMGYCINLTDKAVEAALTACPQICILLFHGCPLITDHSREVLEQLIGSRKLKQVTWSVY", "length": 258 }, "evidence": [ { "id": "A0A5G2QIE4", "url": "https://omabrowser.org/oma/group/A0A5G2QIE4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8IY45-1", "protein_name": "Protein AMN1 homolog", "gene_name": "AMN1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 127, "end_pos": 129 }, { "start_pos": 206, "end_pos": 208 }, { "start_pos": 21, "end_pos": 23 }, { "start_pos": 54, "end_pos": 56 }, { "start_pos": 93, "end_pos": 95 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QKW5-1", "uniprot_ac": "A0A5G2QKW5", "uniprot_id": "A0A5G2QKW5_PIG", "mass": { "chemical_mass": 113435.0, "monoisotopic_mass": 113435.0 }, "refseq": { "ac": "XP_020958043", "name": "syndetin isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020958043" }, "gene_names": [ { "name": "VPS50", "type": "recommended", "evidence": [ { "id": "A0A5G2QKW5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW5" } ] }, { "name": "VPS50", "type": "synonym", "evidence": [ { "id": "XP_020958043", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020958043" } ] } ], "protein_names": [ { "name": "VPS50 subunit of EARP/GARPII complex", "type": "synonym", "evidence": [ { "id": "A0A5G2QKW5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW5/entry#names_and_taxonomy" } ] }, { "name": "syndetin isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020958043", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020958043" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKW5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "VPS50", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW5", "locus": { "chromosome": "9", "start_pos": 73217053, "end_pos": 73074906, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000022982", "url": "https://www.ensembl.org/id/ENSSSCG00000022982" } ] } } ], "crossref": [ { "id": "A0A5G2QKW5", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QKW5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000022982", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000022982", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "106504149", "url": "https://www.ncbi.nlm.nih.gov/gene/106504149", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR019514", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019514", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019515", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019515", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:106504149", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:106504149", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QKW5", "url": "https://www.orthodb.org/?gene=A0A5G2QKW5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13258", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13258", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13258:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13258:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF10474", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10474", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF10475", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10475", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020958043", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020958043", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AL77", "url": "https://www.uniprot.org/uniprotkb/A0A287AL77", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AL77-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AL77-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B427", "url": "https://www.uniprot.org/uniprotkb/A0A287B427", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B427-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B427-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QKW5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QKW5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LA14", "url": "https://www.uniprot.org/uniprotkb/I3LA14", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LA14-1", "url": "https://www.uniprot.org/uniprotkb/I3LA14-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LK39", "url": "https://www.uniprot.org/uniprotkb/I3LK39", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LK39-1", "url": "https://www.uniprot.org/uniprotkb/I3LK39-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVVLSDLLILCGRVYPRGSDMQKIKSLMTRQGLKSPPESLSDLGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQVYFSTDSFDIVRYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELERVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTLQRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVALSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNTDTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTTSASEGSNMMGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIISRLMQVGEEFCGSKSEVLQDSIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSILQLHEFKFMEQSRSPSVSPSKQPSSTSSKTVTLFEQYCSGGNPFEIQANHKDEETEDVLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSLESTGLGLSSSRLRTTLNRIQESLIDMEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSGDTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPIYWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNMRLNEVSKKVRIPLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLINLVNVCLGSHINKKARQKLLSAVDDIDRPKR", "length": 984, "header": "tr|A0A5G2QKW5-1|A0A5G2QKW5_PIG Isoform 1 of VPS50 subunit of EARP/GARPII complex OS=Sus scrofa OX=9823 GN=VPS50 PE=4 SV=2 CANONICAL=A0A5G2QKW5-1" }, "isoforms": [ { "isoform_ac": "A0A287AL77-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AL77/entry", "sequence": { "sequence": "MVVLSDLLILCGRVYPRGSDMQKIKSLMTRQGLKSPPESLSDLGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQVYFSTDSFDIVRYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVALSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNTDTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTTSASEGSNMMGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIISRLMQVGEEFCGSKSEVLQDSIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSILQLHEFKFMEQSRSPSVSPSKQPSSTSSKTVTLFEQYCSGGNPFEIQANHKDEETEDVLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSLESTGLGLSSSRLRTTLNRIQESLIDMEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSGDTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPIYWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNMRLNEVSKKVRIPLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLINLVNVCLGSHINKKARQKLLSAVDDIDRPKR", "length": 909, "header": "tr|A0A287AL77-1|A0A5G2QKW5_PIG Computationally mapped isoform of VPS50 subunit of EARP/GARPII complex OS=Sus scrofa OX=9823 GN=VPS50 PE=4 SV=2 CANONICAL=A0A5G2QKW5-1" }, "locus": { "chromosome": "9", "start_pos": 73214419, "end_pos": 73074946, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052640.2", "url": "https://www.ensembl.org/id/ENSSSCT00000052640.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000044665.2", "url": "https://www.ensembl.org/id/ENSSSCP00000044665.2" } ] } }, { "isoform_ac": "A0A287B427-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B427/entry", "sequence": { "sequence": "MVVLSDLLILCGRVYPRGSDMQKIKSLMTRQGLKSPPESLSDLGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQVYFSTDSFDIVRYELEKLPPVLNLQELEEYRDKLKQQQAAELERVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTLQRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVALSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNTDTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTTSASEGSNMMGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIISRLMQVGEEFCGSKSEVLQDSIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSILQLHEFKFMEQSRSPSVSPSKQPSSTSSKTVTLFEQYCSGGNPFEIQANHKDEETEDVLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSLESTGLGLSSSRLRTTLNRIQESLIDMEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSGDTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPIYWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNMRLNEVSKKVRIPLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLINLVNVCLGSHINKKARQKLLSAVDDIDRPKR", "length": 966, "header": "tr|A0A287B427-1|A0A287B427_PIG Computationally mapped isoform of VPS50 subunit of EARP/GARPII complex OS=Sus scrofa OX=9823 GN=VPS50 PE=4 SV=2 CANONICAL=A0A5G2QKW5-1" }, "locus": { "chromosome": "9", "start_pos": 73214419, "end_pos": 73074946, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037283.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037283.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051016.3", "url": "https://www.ensembl.org/id/ENSSSCP00000051016.3" } ] } }, { "isoform_ac": "A0A5G2QKW5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW5/entry", "sequence": { "sequence": "MVVLSDLLILCGRVYPRGSDMQKIKSLMTRQGLKSPPESLSDLGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQVYFSTDSFDIVRYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELERVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTLQRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVALSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNTDTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTTSASEGSNMMGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIISRLMQVGEEFCGSKSEVLQDSIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSILQLHEFKFMEQSRSPSVSPSKQPSSTSSKTVTLFEQYCSGGNPFEIQANHKDEETEDVLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSLESTGLGLSSSRLRTTLNRIQESLIDMEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSGDTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPIYWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNMRLNEVSKKVRIPLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLINLVNVCLGSHINKKARQKLLSAVDDIDRPKR", "length": 984, "header": "tr|A0A5G2QKW5-1|A0A5G2QKW5_PIG Isoform 1 of VPS50 subunit of EARP/GARPII complex OS=Sus scrofa OX=9823 GN=VPS50 PE=4 SV=2 CANONICAL=A0A5G2QKW5-1" }, "locus": { "chromosome": "9", "start_pos": 73214419, "end_pos": 73074946, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089131.2", "url": "https://www.ensembl.org/id/ENSSSCT00000089131.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062713.2", "url": "https://www.ensembl.org/id/ENSSSCP00000062713.2" } ] } }, { "isoform_ac": "I3LA14-1", "url": "https://www.uniprot.org/uniprotkb/I3LA14/entry", "sequence": { "sequence": "MLTMEEFRELREQPSDPQAEQELINSIEQVYFSTDSFDIVRYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELERVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTLQRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVALSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNTDTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTTSASEGSNMMGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIISRLMQVGEEFCGSKSEVLQDSIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSILQLHEFKFMEQSRSPSVSPSKQPSSTSSKTVTLFEQYCSGGNPFEIQANHKDEETEDVLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSLESTGLGLSSSRLRTTLNRIQESLIDMEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSGDTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPIYWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNMRLNEVSKKVRIPLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLINLVNVCLGSHINKKARQKLLSAVDDIDRPKR", "length": 934, "header": "tr|I3LA14-1|A0A5G2QKW5_PIG Computationally mapped isoform of VPS50 subunit of EARP/GARPII complex OS=Sus scrofa OX=9823 GN=VPS50 PE=4 SV=3 CANONICAL=A0A5G2QKW5-1" }, "locus": { "chromosome": "9", "start_pos": 73214419, "end_pos": 73089255, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032573.4", "url": "https://www.ensembl.org/id/ENSSSCT00000032573.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020880.3", "url": "https://www.ensembl.org/id/ENSSSCP00000020880.3" } ] } }, { "isoform_ac": "I3LK39-1", "url": "https://www.uniprot.org/uniprotkb/I3LK39/entry", "sequence": { "sequence": "MVVLSDLLILCGRVYPRGSDMQKIKSLMTRQGLKSPPESLSDLGAIESLRVPGKHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTTSASEGSNMMGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIISRLMQVGEEFCGSKSEVLQDSIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSILQLHEFKFMEQSRSPSVSPSKQPSSTSSKTVTLFEQYCSGGNPFEIQANHKDEETEDVLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSLESTGLGLSSSRLRTTLNRIQESLIDMEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSGDTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPIYWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNMRLNEVSKKVRIPLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLINLVNVCLGSHINKKARQKLLSAVDDIDRPKR", "length": 704, "header": "tr|I3LK39-1|A0A5G2QKW5_PIG Computationally mapped isoform of VPS50 subunit of EARP/GARPII complex OS=Sus scrofa OX=9823 GN=VPS50 PE=4 SV=4 CANONICAL=A0A5G2QKW5-1" }, "locus": { "chromosome": "9", "start_pos": 73214419, "end_pos": 73074946, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025363.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025363.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024453.4", "url": "https://www.ensembl.org/id/ENSSSCP00000024453.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LA14", "url": "https://www.uniprot.org/uniprotkb/I3LA14" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:106504149", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:106504149", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "EARP complex", "id": "GO:1990745", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990745", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKW5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW5" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKW5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "protein transport", "id": "GO:0015031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015031", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKW5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW5" } ], "pmid": "" }, { "name": "retrograde transport, endosome to Golgi", "id": "GO:0042147", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042147", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKW5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW5" } ], "pmid": "" }, { "name": "endocytic recycling", "id": "GO:0032456", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032456", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKW5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "SNARE binding", "id": "GO:0000149", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000149", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKW5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 486, "end_pos": 488, "annotation": "n_glycosylation_sequon" }, { "start_pos": 497, "end_pos": 499, "annotation": "n_glycosylation_sequon" }, { "start_pos": 629, "end_pos": 631, "annotation": "n_glycosylation_sequon" }, { "start_pos": 677, "end_pos": 679, "annotation": "n_glycosylation_sequon" }, { "start_pos": 876, "end_pos": 878, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QKW5-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 984, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QKW5-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QKW5" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QKW5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW5" }, { "id": "PF10474", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10474" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Syndetin C-terminal", "eco_id": "ECO_0000259", "start_pos": 743, "end_pos": 977, "start_aa": "Leu", "end_aa": "Asp", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A5G2QKW5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKW5" }, { "id": "PF10475", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10475" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Vacuolar protein sorting-associated protein 54 N-terminal", "eco_id": "ECO_0000259", "start_pos": 74, "end_pos": 365, "start_aa": "Ile", "end_aa": "Trp", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], 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"categories": [ "Protein Classification" ] }, { "id": "PF01008", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01008", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-72731", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72731", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287AQM4", "url": "https://www.uniprot.org/uniprotkb/A0A287AQM4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AQM4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AQM4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ATH2", "url": "https://www.uniprot.org/uniprotkb/A0A287ATH2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ATH2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ATH2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QN40", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QN40", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QN40-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QN40-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9G4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9G4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9G4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9G4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S2R7", "url": "https://www.uniprot.org/uniprotkb/F1S2R7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S2R7-1", "url": "https://www.uniprot.org/uniprotkb/F1S2R7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPGAAAKSSELSERIESFVEALKRGSGRHSSEDMARETLGLLRRIITDYRWSNAGELMELIRREGRRMTAAQPSETTVGNMVRRVLRIIREEYGRLHGRSDERDQQESLHKLLTSGGLSEDFRSHYAELQSNIIEAINELLVELEGTTENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFHVIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGALRAVTGTHTLALAAKHHSTPLIVCAPMFKLSPQFPNEEDSFHKFVAPEEVLPFTEGGQRQLTVAWRACHEHTGMAAGTRTELQ", "length": 327, "header": "tr|A0A5G2QN40-1|A0A5G2QN40_PIG Isoform 1 of Translation initiation factor eIF2B subunit beta OS=Sus scrofa OX=9823 GN=EIF2B2 PE=1 SV=1 CANONICAL=A0A5G2QN40-1" }, "isoforms": [ { "isoform_ac": "A0A287AQM4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AQM4/entry", "sequence": { "sequence": "MPGAAAKSSELSERIESFVEALKRGSGRHSSEDMARETLGLLRRIITDYRWSNAGELMELIRREGRRMTAAQPSETTVGNMVRRVLRIIREEYGRLHGRSDERDQQESLHKLLTSGGLSEDFRSHYAELQSNIIEAINELLVELEGTTENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFHVIVAECAPFCQFPNEEDSFHKFVAPEEVLPFTEGDILEKVSVHCPVFDYVPPELITLFISNIGGNAPSYIYRLMSELYHPDDHVL", "length": 273, "header": "tr|A0A287AQM4-1|A0A5G2QN40_PIG Computationally mapped isoform of Translation initiation factor eIF2B subunit beta OS=Sus scrofa OX=9823 GN=EIF2B2 PE=1 SV=1 CANONICAL=A0A5G2QN40-1" }, "locus": { "chromosome": "7", "start_pos": 98210005, "end_pos": 98203920, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042849.3", "url": "https://www.ensembl.org/id/ENSSSCT00000042849.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046359.1", "url": "https://www.ensembl.org/id/ENSSSCP00000046359.1" } ] } }, { "isoform_ac": "A0A287ATH2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ATH2/entry", "sequence": { "sequence": "MPGAAAKSSELSERIESFVEALKRGSGRHSSEDMARETLGLLRRIITDYRWSNAGELMELIRREGRRMTAAQPSETTVGNMVRRVLRIIREEYGRLHGRSDERDQQESLHKLLTSGGLSEDFRSHYAELQSNIIEAINELLVELEGTTENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFHVIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGALRAVTGTHTLALAAKHHSTPLIVCAPMFKLSPQFPNEEDSFHKFVAPEEVLPFTEGT", "length": 301, "header": "tr|A0A287ATH2-1|A0A5G2QN40_PIG Computationally mapped isoform of Translation initiation factor eIF2B subunit beta OS=Sus scrofa OX=9823 GN=EIF2B2 PE=1 SV=2 CANONICAL=A0A5G2QN40-1" }, "locus": { "chromosome": "7", "start_pos": 98210278, "end_pos": 98203920, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038266.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038266.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047224.2", "url": "https://www.ensembl.org/id/ENSSSCP00000047224.2" } ] } }, { "isoform_ac": "A0A5G2QN40-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QN40/entry", "sequence": { "sequence": "MPGAAAKSSELSERIESFVEALKRGSGRHSSEDMARETLGLLRRIITDYRWSNAGELMELIRREGRRMTAAQPSETTVGNMVRRVLRIIREEYGRLHGRSDERDQQESLHKLLTSGGLSEDFRSHYAELQSNIIEAINELLVELEGTTENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFHVIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGALRAVTGTHTLALAAKHHSTPLIVCAPMFKLSPQFPNEEDSFHKFVAPEEVLPFTEGGQRQLTVAWRACHEHTGMAAGTRTELQ", "length": 327, "header": "tr|A0A5G2QN40-1|A0A5G2QN40_PIG Isoform 1 of Translation initiation factor eIF2B subunit beta OS=Sus scrofa OX=9823 GN=EIF2B2 PE=1 SV=1 CANONICAL=A0A5G2QN40-1" }, "locus": { "chromosome": "7", "start_pos": 98222132, "end_pos": 98203920, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090933.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090933.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065463.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065463.1" } ] } }, { "isoform_ac": "A0A5G2R9G4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9G4/entry", "sequence": { "sequence": "MPGAAAKSSELSERIESFVEALKRGSGRHSSEDMARETLGLLRRIITDYRWSNAGELMELIRREGRRMTAAQPSETTVGNMVRRVLRIIREEYGRLHGRSDERDQQESLHKLLTSGGLSEDFRSHYAELQSNIIEAINELLVELEGTTENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFHVIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGALRAVTGTHTLALAAKHHSTPLIVCAPMFKLSPQFPNEEDSFHKFVAPEEVLPFTEGNGSYLNQERKGSEL", "length": 314, "header": "tr|A0A5G2R9G4-1|A0A5G2QN40_PIG Computationally mapped isoform of Translation initiation factor eIF2B subunit beta OS=Sus scrofa OX=9823 GN=EIF2B2 PE=1 SV=2 CANONICAL=A0A5G2QN40-1" }, "locus": { "chromosome": "7", "start_pos": 98209580, "end_pos": 98203920, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000073106.2", "url": "https://www.ensembl.org/id/ENSSSCT00000073106.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073711.2", "url": "https://www.ensembl.org/id/ENSSSCP00000073711.2" } ] } }, { "isoform_ac": "F1S2R7-1", "url": "https://www.uniprot.org/uniprotkb/F1S2R7/entry", "sequence": { "sequence": "MPGAAAKSSELSERIESFVEALKRGSGRHSSEDMARETLGLLRRIITDYRWSNAGELMELIRREGRRMTAAQPSETTVGNMVRRVLRIIREEYGRLHGRSDERDQQESLHKLLTSGGLSEDFRSHYAELQSNIIEAINELLVELEGTTENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFHVIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGALRAVTGTHTLALAAKHHSTPLIVCAPMFKLSPQFPNEEDSFHKFVAPEEVLPFTEGDILEKELKLSGSVECYI", "length": 317, "header": "tr|F1S2R7-1|A0A5G2QN40_PIG Computationally mapped isoform of Translation initiation factor eIF2B subunit beta OS=Sus scrofa OX=9823 GN=EIF2B2 PE=1 SV=3 CANONICAL=A0A5G2QN40-1" }, "locus": { "chromosome": "7", "start_pos": 98210309, "end_pos": 98203920, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002643.5", "url": "https://www.ensembl.org/id/ENSSSCT00000002643.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002576.4", "url": "https://www.ensembl.org/id/ENSSSCP00000002576.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R9G4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9G4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-72731", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72731", "resource": "Reactome", "description": "Recycling of eIF2:GDP" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QN40", "url": 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CANONICAL=A0A5G2QJK6-1" }, "locus": { "chromosome": "13", "start_pos": 4540597, "end_pos": 4203771, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060482.3", "url": "https://www.ensembl.org/id/ENSSSCT00000060482.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046266.3", "url": "https://www.ensembl.org/id/ENSSSCP00000046266.3" } ] } }, { "isoform_ac": "A0A5G2QJK6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJK6/entry", "sequence": { "sequence": 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"start_pos": 4540597, "end_pos": 4203771, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000086986.2", "url": "https://www.ensembl.org/id/ENSSSCT00000086986.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064981.2", "url": "https://www.ensembl.org/id/ENSSSCP00000064981.2" } ] } }, { "isoform_ac": "A0A5G2QP04-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP04/entry", "sequence": { "sequence": 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"https://www.uniprot.org/uniprotkb/A0A5G2QP04" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJK6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJK6" } ], "pmid": "" }, { "name": "AP-2 adaptor complex binding", "id": "GO:0035612", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035612", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJK6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJK6" } ], "pmid": "" }, { "name": "retromer complex binding", "id": "GO:1905394", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905394", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJK6", "url": 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Involved in endocytosis of integrin beta-1 (ITGB1) and transferrin receptor (TFR); internalization of ITGB1 as DAB2-dependent cargo but not TFR seems to require association with DAB2.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R177", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R177#function" }, { "database": "UniProtKB", "id": "ARBA00054390", "url": "https://www.uniprot.org/uniprotkb/ARBA00054390#function" }, { "database": "UniProtKB", "id": "F1S6G0", "url": "https://www.uniprot.org/uniprotkb/F1S6G0#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFX7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFX7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "EPS15", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFX7", "locus": { "chromosome": "6", "start_pos": 160801288, "end_pos": 160653917, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000003872", "url": "https://www.ensembl.org/id/ENSSSCG00000003872" } ] } } ], "crossref": [ { "id": "A0A5G2QFX7", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QFX7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000003872", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000003872", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00052", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00052", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100518076", "url": "https://www.ncbi.nlm.nih.gov/gene/100518076", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000261", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000261", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002048", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002048", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003903", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003903", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011992", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011992", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018247", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018247", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "A0A287BLR5", "url": "https://www.orthodb.org/?gene=A0A287BLR5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F1S6G0", "url": "https://www.orthodb.org/?gene=F1S6G0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11216", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11216", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11216:SF54", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11216:SF54", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12763", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12763", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-182971", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-182971", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-6807004", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6807004", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8856825", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8856825", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8856828", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8856828", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9766229", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9766229", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287AX51", "url": "https://www.uniprot.org/uniprotkb/A0A287AX51", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AX51-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AX51-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B0Y7", "url": "https://www.uniprot.org/uniprotkb/A0A287B0Y7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B0Y7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B0Y7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BE83", "url": "https://www.uniprot.org/uniprotkb/A0A287BE83", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BE83-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BE83-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BLR5", "url": "https://www.uniprot.org/uniprotkb/A0A287BLR5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BLR5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BLR5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFX7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFX7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFX7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFX7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QMQ0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMQ0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QMQ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMQ0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QRX3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QRX3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QRX3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QRX3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R177", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R177", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R177-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R177-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S6G0", "url": "https://www.uniprot.org/uniprotkb/F1S6G0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S6G0-1", "url": "https://www.uniprot.org/uniprotkb/F1S6G0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAIENLESEDSANVVSPLICSTSSELQFYHLCNGCDKDNLNCQCCLDGTLLIWPSTDSVAFVSQKIPAPLLKTPFPKSQGGRQVNGDNFIFMFIISLWFVSFQVDSGSTGRVLASDAAVFLKKSGLPDLILGKIWDLADTDGKGILSKQEFFVALRLVACAQNGLEVSLNSLNLAVPPPRFHDTSSPLLISGTSAVELPWAVKSEDKAKYDAIFDSLSPVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVYCALEKEPVPMSLPPALVPPSKRKTWVVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSALLAHIWALCDTKDCGKLSKDQFALAFHLINQKLIKGIDPPHILSPEMIPPSDRATLQKNIVGSSSAADFSAIKELDTLNNEIVDLQREKNNVEQDLKEKEDTIKQRTSEVQDLQDEVQRENTNLQKLQAQKQQVQELLDGLDEQKAQLEEQLQEVRKKCAEEAQLISSLKAEITSQESQISTYEEELAKAREELSRLQQETAELEESVESGKAQLGPLQQHLQDSQQEISSLQMKLMEMKELENNNNQSNWCSSPHSILVNGTTDYCSLSTSSSETANLNEHAEGQSNLESEPIHQESPARSSPEILPSGVTDENEVVTATVNEKVCPEFNSDGHSKEEDPFNVESSSLTNPVADSNLDFFQSDPFVGSDPFKDDPFGKIDPFGGDPFKGSDPFASDCFFKQSSTDPFATSSTDPFSVASNSTTSVETLKHNDPFAPGGTVVVAASDSATDPFASVFGSESFEGGFADFSTLSKVNNEDPFSSATSSSVGTVVLTKNVLEEASVKSEDVPPALPPKIGTPTRPCPPPPGKRPINKLDSSDSFKLNDPFQPFPGNDSPKEKDPDMFCDPFTASPTTGTTNKEADPSNFANFSAYPSEEDMIEWAKRESEREEEQRLARLNQQEQEDLELAIALSKSEISEA", "length": 979, "header": "tr|A0A5G2QFX7-1|A0A5G2QFX7_PIG Isoform 1 of Epidermal growth factor receptor pathway substrate 15 OS=Sus scrofa OX=9823 GN=EPS15 PE=1 SV=1 CANONICAL=A0A5G2QFX7-1" }, "isoforms": [ { "isoform_ac": "A0A287AX51-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AX51/entry", "sequence": { "sequence": "MAAAAQLSLTQLSSGNPLYEKYYRQVDSGSTGRVLASDAAVFLKKSGLPDLILGKEFFVALRLVACAQNGLEVSLNSLNLAVPPPRFHDTSSPLLISGTSAVELPWAVKSEDKAKYDAIFDSLSPVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVYCALEKEPVPMSLPPALVPPSKRKTWVVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSALLAHIWALCDTKDCGKLSKDQFALAFHLINQKLIKGIDPPHILSPEMIPPSDRATLQKNIVGSSSAADFSAIKELDTLNNEIVDLQREKNNVEQDLKEKEDTIKQRTSEVQDLQDEVQRENTNLQKLQAQKQQVQELLDGLDEQKAQLEEQLQEVRKKCAEEAQLISSLKAEITSQESQISTYEEELAKAREELSRLQQETAELEESVESGKAQLGPLQQHLQDSQQEISSLQMKLMEMKELENNNNQSNWCSSPHSILVNGTTDYCSLSTSSSETANLNEHAEGQSNLESEPIHQESPARSSPEILPSGVTDENEVVTATVNEKVCPEFNSDGHSKEEDPFNVESSSLTNPVADSNLDFFQSDPFVGSDPFKDDPFGKIDPFGGDPFKGSDPFASDCFFKQSSTDPFATSSTDPFSVASNSTTSVETLKHNDPFAPGGTVVVAASDSATDPFASVFGSESFEGGFADFSTLSKVNNEDPFSSATSSSVGTVVLTKNVLEEASVKSEDVPPALPPKIGTPTRPCPPPPGKRPINKLDSSDSFKLNDPFQPFPGNDSPKEKDPDMFCDPFTASPTTGTTNKEADPSNFANFSAYPSEEDMIEWAKRESEREEEQRLARLNQQEQEDLELAIALSKSEISEA", "length": 884, "header": "tr|A0A287AX51-1|A0A5G2QFX7_PIG Computationally mapped isoform of Epidermal growth factor receptor pathway substrate 15 OS=Sus scrofa OX=9823 GN=EPS15 PE=1 SV=1 CANONICAL=A0A5G2QFX7-1" }, "locus": { "chromosome": "6", "start_pos": 160790052, "end_pos": 160654038, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000036928.1", "url": "https://www.ensembl.org/id/ENSSSCT00000036928.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000048732.1", "url": "https://www.ensembl.org/id/ENSSSCP00000048732.1" } ] } }, { "isoform_ac": "A0A287B0Y7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B0Y7/entry", "sequence": { "sequence": "MAAAAQLSLTQLSSGNPLYEKYYRQVDSGSTGRVLASDAAVFLKKSGLPDLILGKIWDLADTDGKGILSKQEFFVALRLVACAQNGLEVSLNSLNLAVPPPRFHDTSSPLLISGTSAVELPWAVKSEDKAKYDAIFDSLSPVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVYCALEKEPVPMSLPPALVPPSKRKTWVVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSALLAHIWALCDTKDCGKLSKDQFALAFHLINQKLIKGIDPPHILSPEMIPPSDRATLQKNIVGSSSAADFSAIKELDTLNNEIVDLQREKNNVEQDLKEKEDTIKQRTSEVQDLQDEVQRENTNLQKLQAQKQQVQELLDGLDEQKAQLEEQLQEVRKKCAEEAQLARSSPEILPSGVTDENEVVTATVNEKVCPEFNSDGHSKEEDPFNVESSSLTNPVADSNLDFFQSDPFVGSDPFKDDPFGKIDPFGGDPFKGSDPFASDCFFKQSSTDPFATSSTDPFSVASNSTTSVETLKHNDPFAPGGTVVVAASDSATDPFASVFGSESFEGGFADFSTLSKVNNEDPFSSATSSSVGTVVLTKNVLEEASVKSEDVPPALPPKIGTPTRPCPPPPGKRPINKLDSSDSFKLNDPFQPFPGNDSPKEKDPDMFCDPFTASPTTGTTNKEADPSNFANFSAYPSEEDMIEWAKRESEREEEQRLARLNQQEQEDLELAIALSKSEISEA", "length": 766, "header": "tr|A0A287B0Y7-1|A0A5G2QFX7_PIG Computationally mapped isoform of Epidermal growth factor receptor pathway substrate 15 OS=Sus scrofa OX=9823 GN=EPS15 PE=1 SV=2 CANONICAL=A0A5G2QFX7-1" }, "locus": { "chromosome": "6", "start_pos": 160790052, "end_pos": 160654038, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039780.3", "url": "https://www.ensembl.org/id/ENSSSCT00000039780.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049822.2", "url": "https://www.ensembl.org/id/ENSSSCP00000049822.2" } ] } }, { "isoform_ac": "A0A287BE83-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BE83/entry", "sequence": { "sequence": "LGNSFFFPDCLIYPYTGRVLASDAAVFLKKSGLPDLILGKIWDLADTDGKGILSKQEFFVALRLVACAQNGLEVSLNSLNLAVPPPRFHDTSSPLLISGTSAVELPWAVKSEDKAKYDAIFDSLSPVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVYCALEKEPVPMSLPPALVPPSKRKTVSISGPMRLIPSSSASAKEPYHSLPPVGILPTKAPLRQWVVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSALLAHIWALCDTKDCGKLSKDQFALAFHLINQKLIKGIDPPHILSPEMIPPSDRATLQKNIVGSSSAADFSAIKELDTLNNEIVDLQREKNNVEQDLKEKEDTIKQRTSEVQDLQDEVQRENTNLQKLQAQKQQVQELLDGLDEQKAQLEEQLQEVRKKCAEEAQLISSLKAEITSQESQISTYEEELAKAREELSRLQQETAELEESVESGKAQLGPLQQHLQDSQQEISSLQMKLMEMKELENNNNQSNWCSSPHSILVNGTTDYCSLSTSSSETANLNEHAEGQSNLESEPIHQESPARSSPEILPSGVTDENEVVTATVNEKVCPEFNSDGHSKEEDPFNVESSSLTNPVADSNLDFFQSDPFVGNPFGGDPFKGSDPFASDCFFKQSSTDPFATSSTDPFSVASNSTTSVETLKHNDPFAPGGTVVVAASDSATDPFASVFGSESFEGGFADFSTLSKVNNEDPFSSATSSSVGTVVLTKNVLEEASVKSEDVPPALPPKIGTPTRPCPPPPGKRPINKLDSSDSFKLNDPFQPFPGNDSPKEKDPDMFCDPFTASPTTGTTNKEADPSNFANFSAYPSEEDMIEWAKRESEREEEQRLARLNQQEQEDLELAIALSKSEISEA", "length": 911, "header": "tr|A0A287BE83-1|A0A287BE83_PIG Computationally mapped isoform of Epidermal growth factor receptor pathway substrate 15 OS=Sus scrofa OX=9823 GN=EPS15 PE=1 SV=3 CANONICAL=A0A5G2QFX7-1" }, "locus": { "chromosome": "6", "start_pos": 160790052, "end_pos": 160690157, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042554.3", "url": "https://www.ensembl.org/id/ENSSSCT00000042554.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054838.3", "url": "https://www.ensembl.org/id/ENSSSCP00000054838.3" } ] } }, { "isoform_ac": "A0A287BLR5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BLR5/entry", "sequence": { "sequence": "MAAAAQLSLTQLSSGNPLYEKYYRQVDSGSTGRVLASDAAVFLKKSGLPDLILGKIWDLADTDGKGILSKQEFFVALRLVACAQNGLEVSLNSLNLAVPPPRFHDTSSPLLISGTSAVELPWAVKSEDKAKYDAIFDSLSPVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVYCALEKEPVPMSLPPALVPPSKRKTVSISGPMRLIPSSSASAKEPYHSLPPVGILPTKAPLRQWVVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSALLAHIWALCDTKDCGKLSKDQFALAFHLINQKLIKGIDPPHILSPEMIPPSDRATLQKNIVGSSSAADFSAIKELDTLNNEIVDLQREKNNVEQDLKEKEDTIKQRTSEVQDLQDEVQRENTNLQKLQAQKQQVQELLDGLDEQKAQLEEQLQEVRKKCAEEAQLISSLKAEITSQESQISTYEEELAKAREELSRLQQETAELEESVESGKAQLGPLQQHLQDSQQEISSARSSPEILPSGVTDENEVVTATVNEKVCPEFNSDGHSKEEDPFNVESSSLTNPVADSNLDFFQSDPFVGSDPFKDDPFGKIDPFGGDPFKGSDPFASDCFFKQSSTDPFATSSTDPFSVASNSTTSVETLKHNDPFAPGGTVVVAASDSATDPFASVFGSESFEGGFADFSTLSKVNNEDPFSSATSSSVGTVVLTKNVLEEASVKSEDVPPALPPKIGTPTRPCPPPPGKRPINKLDSSDSFKLNDPFQPFPGNDSPKEKDPDMFCDPFTASPTTGTTNKEADPSNFANFSAYPSEEDMIEWAKRESEREEEQRLARLNQQEQEDLELAIALSKSEISEA", "length": 870, "header": "tr|A0A287BLR5-1|A0A287BLR5_PIG Computationally mapped isoform of Epidermal growth factor receptor pathway substrate 15 OS=Sus scrofa OX=9823 GN=EPS15 PE=1 SV=2 CANONICAL=A0A5G2QFX7-1" }, "locus": { "chromosome": "6", "start_pos": 160790052, "end_pos": 160654038, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059835.3", "url": "https://www.ensembl.org/id/ENSSSCT00000059835.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057555.2", "url": "https://www.ensembl.org/id/ENSSSCP00000057555.2" } ] } }, { "isoform_ac": "A0A5G2QFX7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFX7/entry", "sequence": { "sequence": "MAAIENLESEDSANVVSPLICSTSSELQFYHLCNGCDKDNLNCQCCLDGTLLIWPSTDSVAFVSQKIPAPLLKTPFPKSQGGRQVNGDNFIFMFIISLWFVSFQVDSGSTGRVLASDAAVFLKKSGLPDLILGKIWDLADTDGKGILSKQEFFVALRLVACAQNGLEVSLNSLNLAVPPPRFHDTSSPLLISGTSAVELPWAVKSEDKAKYDAIFDSLSPVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVYCALEKEPVPMSLPPALVPPSKRKTWVVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSALLAHIWALCDTKDCGKLSKDQFALAFHLINQKLIKGIDPPHILSPEMIPPSDRATLQKNIVGSSSAADFSAIKELDTLNNEIVDLQREKNNVEQDLKEKEDTIKQRTSEVQDLQDEVQRENTNLQKLQAQKQQVQELLDGLDEQKAQLEEQLQEVRKKCAEEAQLISSLKAEITSQESQISTYEEELAKAREELSRLQQETAELEESVESGKAQLGPLQQHLQDSQQEISSLQMKLMEMKELENNNNQSNWCSSPHSILVNGTTDYCSLSTSSSETANLNEHAEGQSNLESEPIHQESPARSSPEILPSGVTDENEVVTATVNEKVCPEFNSDGHSKEEDPFNVESSSLTNPVADSNLDFFQSDPFVGSDPFKDDPFGKIDPFGGDPFKGSDPFASDCFFKQSSTDPFATSSTDPFSVASNSTTSVETLKHNDPFAPGGTVVVAASDSATDPFASVFGSESFEGGFADFSTLSKVNNEDPFSSATSSSVGTVVLTKNVLEEASVKSEDVPPALPPKIGTPTRPCPPPPGKRPINKLDSSDSFKLNDPFQPFPGNDSPKEKDPDMFCDPFTASPTTGTTNKEADPSNFANFSAYPSEEDMIEWAKRESEREEEQRLARLNQQEQEDLELAIALSKSEISEA", "length": 979, "header": "tr|A0A5G2QFX7-1|A0A5G2QFX7_PIG Isoform 1 of Epidermal growth factor receptor pathway substrate 15 OS=Sus scrofa OX=9823 GN=EPS15 PE=1 SV=1 CANONICAL=A0A5G2QFX7-1" }, "locus": { "chromosome": "6", "start_pos": 160790052, "end_pos": 160690770, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077664.1", "url": "https://www.ensembl.org/id/ENSSSCT00000077664.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060940.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060940.1" } ] } }, { "isoform_ac": "A0A5G2QMQ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMQ0/entry", "sequence": { "sequence": "LGNSFFFPDCLIYPYTGRVLASDAAVFLKKSGLPDLILGKIWDLADTDGKGILSKQEFFVALRLVACAQNGLEVSLNSLNLAVPPPRFHDTSSPLLISGTSAVELPWAVKSEDKAKYDAIFDSLSPVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVYCALEKEPVPMSLPPALVPPSKRKTVSISGPMRLIPSSSASAKEPYHSLPPVGILPTKAPLRQWVVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSALLAHIWALCDTKDCGKLSKDQFALAFHLINQKLIKGIDPPHILSPEMIPPSDRATLQKNIVGSSSAADFSAIKELDTLNNEIVDLQREKNNVEQDLKEKEDTIKQRTSEVQDLQDEVQRENTNLQKLQAQKQQVQELLDGLDEQKAQLEEQLQEVRKKCAEEAQLISSLKAEITSQESQISTYEEELAKAREELSRLQQETAELEESVESGKAQLGPLQQHLQDSQQEISSEDPFNVESSSLTNPVADSNLDFFQSDPFVGSDPFKDDPFGKIDPFGGDPFKGSDPFASDCFFKQSSTDPFATSSTDPFSVASNSTTSVETLKHNDPFAPGGTVVVAASDSATDPFASVFGSESFEGGFADFSTLSKVNNEDPFSSATSSSVGTVVLTKNVLEEASVKSEDVPPALPPKIGTPTRPCPPPPGKRPINKLDSSDSFKLNDPFQPFPGNDSPKEKDPDMFCDPFTASPTTGTTNKEADPSNFANFSAYPSEEDMIEWAKRESEREEEQRLARLNQQEQEDLELAIALSKSEISEA", "length": 816, "header": "tr|A0A5G2QMQ0-1|A0A5G2QFX7_PIG Computationally mapped isoform of Epidermal growth factor receptor pathway substrate 15 OS=Sus scrofa OX=9823 GN=EPS15 PE=1 SV=2 CANONICAL=A0A5G2QFX7-1" }, "locus": { "chromosome": "6", "start_pos": 160790052, "end_pos": 160690157, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082454.2", "url": "https://www.ensembl.org/id/ENSSSCT00000082454.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066152.2", "url": "https://www.ensembl.org/id/ENSSSCP00000066152.2" } ] } }, { "isoform_ac": "A0A5G2QRX3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QRX3/entry", "sequence": { "sequence": "LGNSFFFPDCLIYPYTGRVLASDAAVFLKKSGLPDLILGKIWDLADTDGKGILSKQEFFVALRLVACAQNGLEVSLNSLNLAVPPPRFHDTSSPLLISGTSAVELPWAVKSEDKAKYDAIFDSLSPVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVYCALEKEPVPMSLPPALVPPSKRKTVSISGPMRLIPSSSASAKEPYHSLPPVGILPTKAPLRQWVVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSALLAHIWALCDTKDCGKLSKDQFALAFHLINQKLIKGIDPPHILSPEMIPPSDRATLQKNIVGSSSAADFSAIKELDTLNNEIVDLQREKNNVEQDLKEKEDTIKQRTSEVQDLQDEVQRENTNLQKLQAQKQQVQELLDGLDEQKAQLEEQLQEVRKKCAEEAQLISSLKAEITSQESQISTYEEELAKAREELSRLQQETAELEESVESGKAQLGPLQQHLQDSQQEISSLQMKLMEMKELENNNNQSNWCSSPHSILVNGTTDYCSLSTSSSETANLNEHAEGQSNLESEPIHQESPARSSPEILPSGVTDENEVVTATVNEKVCPEFNSDGHSKEEDPFNVESSSLTNPVADSNLDFFQSDPFVGSDPFKDDPFGKIDPFGGDPFKGSDPFASDCFFKQSSTDPFATSSTDPFSVASNSTTSVETLKHNDPFAPGGTVVVAASDSATDPFASVFGSESFEGGFADFSTLSKVNNEDPFSSATSSSVGTVVLTKNVLEEASVKSEDVPPALPPKIGTPTRPCPPPPGKRPINKLDSSDSFKLNDPFQPFPGNDSPKEKDPDMFCDPFTASPTTGTTNKEADPSNFANFSAYPSEEDMIEWAKRESEREEEQRLARLNQQEQEDLELAIALSKSEISEA", "length": 923, "header": "tr|A0A5G2QRX3-1|A0A5G2QFX7_PIG Computationally mapped isoform of Epidermal growth factor receptor pathway substrate 15 OS=Sus scrofa OX=9823 GN=EPS15 PE=1 SV=2 CANONICAL=A0A5G2QFX7-1" }, "locus": { "chromosome": "6", "start_pos": 160790052, "end_pos": 160690157, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076867.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076867.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066849.2", "url": "https://www.ensembl.org/id/ENSSSCP00000066849.2" } ] } }, { "isoform_ac": "A0A5G2R177-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R177/entry", "sequence": { "sequence": "MAAAAQLSLTQLSSGNPLYEKYYRQVDSGSTGRVLASDAAVFLKKSGLPDLILGKIWDLADTDGKGILSKQEFFVALRLVACAQNGLEVSLNSLNLAVPPPRFSEDKAKYDAIFDSLSPVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVYCALEKEPVPMSLPPALVPPSKRKTWVVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSALLAHIWALCDTKDCGKLSKDQFALAFHLINQKLIKGIDPPHILSPEMIPPSDRATLQKNIVGSSSAADFSAIKELDTLNNEIVDLQREKNNVEQDLKEKEDTIKQRTSEVQDLQDEVQRENTNLQKLQAQKQQVQELLDGLDEQKAQLEEQLQEVRKKCAEEAQLISSLKAEITSQESQISTYEEELAKAREELSRLQQETAELEESVESGKAQLGPLQQHLQDSQQEISSLQMKLMEMKELENNNNQSNWCSSPHSILVNGTTDYCSLSTSSSETANLNEHAEGQSNLESEPIHQESPARSSPEILPSGVTDENEVVTATVNEKVCPEFNSDGHSKEEDPFNVESSSLTNPVADSNLDFFQSDPFVGSDPFKDDPFGKIDPFGGDPFKGSDPFASDCFFKQSSTDPFATSSTDPFSVASNSTTSVETLKHNDPFAPGGTVVVAASDSATDPFASVFGSESFEGGFADFSTLSKVNNEDPFSSATSSSVGTVVLTKNVLEEASVKSEDVPPALPPKIGTPTRPCPPPPGKRPINKLDSSDSFKLNDPFQPFPGNDSPKEKDPDMFCDPFTASPTTGTTNKEADPSNFANFSAYPSEEDMIEWAKRESEREEEQRLARLNQQEQEDLELAIALSKSEISEA", "length": 878, "header": "tr|A0A5G2R177-1|A0A5G2QFX7_PIG Computationally mapped isoform of Epidermal growth factor receptor pathway substrate 15 OS=Sus scrofa OX=9823 GN=EPS15 PE=1 SV=2 CANONICAL=A0A5G2QFX7-1" }, "locus": { "chromosome": "6", "start_pos": 160790052, "end_pos": 160654038, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087864.2", "url": "https://www.ensembl.org/id/ENSSSCT00000087864.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067966.2", "url": "https://www.ensembl.org/id/ENSSSCP00000067966.2" } ] } }, { "isoform_ac": "F1S6G0-1", "url": "https://www.uniprot.org/uniprotkb/F1S6G0/entry", "sequence": { "sequence": "MAAAAQLSLTQLSSGNPLYEKYYRQVDSGSTGRVLASDAAVFLKKSGLPDLILGKIWDLADTDGKGILSKQEFFVALRLVACAQNGLEVSLNSLNLAVPPPRFHDTSSPLLISGTSAVELPWAVKSEDKAKYDAIFDSLSPVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVYCALEKEPVPMSLPPALVPPSKRKTVSISGPMRLIPSSSASAKEPYHSLPPVGILPTKAPLRQWVVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSALLAHIWALCDTKDCGKLSKDQFALAFHLINQKLIKGIDPPHILSPEMIPPSDRATLQKNIVGSSSAADFSAIKELDTLNNEIVDLQREKNNVEQDLKEKEDTIKQRTSEVQDLQDEVQRENTNLQKLQAQKQQVQELLDGLDEQKAQLEEQLQEVRKKCAEEAQLISSLKAEITSQESQISTYEEELAKAREELSRLQQETAELEESVESGKAQLGPLQQHLQDSQQEISSLQMKLMEMKELENNNNQSNWCSSPHSILVNGTTDYCSLSTSSSETANLNEHAEGQSNLESEPIHQESPARSSPEILPSGVTDENEVVTATVNEKVCPEFNSDGHSKEEDPFNVESSSLTNPVADSNLDFFQSDPFVGSDPFKDDPFGKIDPFGGDPFKGSDPFASDCFFKQSSTDPFATSSTDPFSVASNSTTSVETLKHNDPFAPGGTVVVAASDSATDPFASVFGSESFEGGFADFSTLSKVNNEDPFSSATSSSVGTVVLTKNVLEEASVKSEDVPPALPPKIGTPTRPCPPPPGKRPINKLDSSDSFKLNDPFQPFPGNDSPKEKDPDMFCDPFTASPTTGTTNKEADPSNFANFSAYPSEEDMIEWAKRESEREEEQRLARLNQQEQEDLELAIALSKSEISEA", "length": 938, "header": "tr|F1S6G0-1|A0A5G2QFX7_PIG Computationally mapped isoform of Epidermal growth factor receptor pathway substrate 15 OS=Sus scrofa OX=9823 GN=EPS15 PE=1 SV=4 CANONICAL=A0A5G2QFX7-1" }, "locus": { "chromosome": "6", "start_pos": 160790052, "end_pos": 160654038, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004284.5", "url": "https://www.ensembl.org/id/ENSSSCT00000004284.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004185.4", "url": "https://www.ensembl.org/id/ENSSSCP00000004185.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMQ0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMQ0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-182971", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-182971", "resource": "Reactome", "description": "EGFR downregulation" }, { "id": "R-SSC-6807004", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6807004", "resource": "Reactome", "description": "Negative regulation of MET activity" }, { "id": "R-SSC-8856825", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8856825", "resource": "Reactome", "description": "Cargo recognition for clathrin-mediated endocytosis" }, { "id": "R-SSC-8856828", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8856828", "resource": "Reactome", "description": "Clathrin-mediated endocytosis" }, { "id": "R-SSC-9766229", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9766229", "resource": "Reactome", "description": "Degradation of CDH1" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 6, "go_terms": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFX7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFX7" } ], "pmid": "" }, { "name": "protein-macromolecule adaptor activity", "id": "GO:0030674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030674", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFX7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFX7" } ], "pmid": "" }, { "name": "polyubiquitin modification-dependent protein binding", "id": "GO:0031593", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031593", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFX7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFX7" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFX7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFX7" } ], "pmid": "" }, { "name": "ubiquitin binding", "id": "GO:0043130", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043130", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFX7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFX7" } ], "pmid": "" }, { "name": "SH3 domain binding", "id": "GO:0017124", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017124", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFX7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFX7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 9, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFX7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFX7" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFX7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFX7" } ], "pmid": "" }, { "name": "clathrin-coated pit", "id": "GO:0005905", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005905", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFX7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFX7" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFX7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFX7" } ], "pmid": "" }, { "name": "AP-2 adaptor complex", "id": "GO:0030122", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030122", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFX7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFX7" } ], "pmid": "" }, { "name": "ciliary membrane", "id": "GO:0060170", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060170", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFX7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFX7" } ], "pmid": "" }, { "name": "aggresome", "id": "GO:0016235", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016235", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFX7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFX7" } ], "pmid": "" }, { "name": "clathrin coat of coated pit", "id": "GO:0030132", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030132", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFX7", "url": 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"name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 586, "end_pos": 588 }, { "start_pos": 600, "end_pos": 602 }, { "start_pos": 760, "end_pos": 762 }, { "start_pos": 893, "end_pos": 895 }, { "start_pos": 928, "end_pos": 930 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { 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"n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QJ51-1", "uniprot_ac": "A0A5G2QJ51", "uniprot_id": "A0A5G2QJ51_PIG", "mass": { "chemical_mass": 30088.0, "monoisotopic_mass": 30088.0 }, "refseq": {}, "gene_names": [ { "name": "SNRPA1", "type": "recommended", "evidence": [ { "id": "A0A5G2QJ51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ51" } ] } ], "protein_names": [ { "name": "Small nuclear ribonucleoprotein polypeptide A'", "type": "synonym", "evidence": [ { "id": "A0A5G2QJ51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ51/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Involved in pre-mRNA splicing as component of the spliceosome. Associated with sn-RNP U2, where it contributes to the binding of stem loop IV of U2 snRNA.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R0B7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0B7#function" }, { "database": "UniProtKB", "id": "ARBA00056565", "url": "https://www.uniprot.org/uniprotkb/ARBA00056565#function" }, { "database": "UniProtKB", "id": "A0A5G2R5J9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5J9#function" }, { "database": "UniProtKB", "id": "A0A287BJ11", "url": "https://www.uniprot.org/uniprotkb/A0A287BJ11#function" }, { "database": "UniProtKB", "id": "A0A4X1U3W9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1U3W9#function" }, { "database": "UniProtKB", "id": "F1RWS8", "url": "https://www.uniprot.org/uniprotkb/F1RWS8#function" }, { "database": "UniProtKB", "id": "A0A5G2QJ51", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ51#function" }, { "database": "UniProtKB", "id": "A0A5G2QQ73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQ73#function" }, { "database": "UniProtKB", "id": "A0A8D0P4U3", "url": "https://www.uniprot.org/uniprotkb/A0A8D0P4U3#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJ51", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ51" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SNRPA1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ51", "locus": { "chromosome": "1", "start_pos": 145719385, "end_pos": 145707413, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005786", "url": "https://www.ensembl.org/id/ENSSSCG00000005786" } ] } } ], "crossref": [ { "id": "A0A5G2QJ51", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QJ51", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000005786", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005786", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR001611", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001611", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003603", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003603", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044640", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044640", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR10552", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10552", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10552:SF6", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10552:SF6", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF14580", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14580", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-72163", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72163", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9770562", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9770562", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9943411", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9943411", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287BJ11", "url": "https://www.uniprot.org/uniprotkb/A0A287BJ11", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BJ11-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BJ11-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1U3W9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1U3W9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1U3W9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1U3W9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJ51", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ51", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJ51-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ51-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QQ73", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQ73", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QQ73-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQ73-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0B7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0B7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0B7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0B7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R5J9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5J9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R5J9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5J9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0P4U3", "url": "https://www.uniprot.org/uniprotkb/A0A8D0P4U3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0P4U3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0P4U3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RWS8", "url": "https://www.uniprot.org/uniprotkb/F1RWS8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RWS8-1", "url": "https://www.uniprot.org/uniprotkb/F1RWS8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARRSKTFNPGAGLPADKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQIPGRERRSGQETSFDRKNVMSQDSGDGCMQKLKQTLLHAME", "length": 269, "header": "tr|A0A5G2QJ51-1|A0A5G2QJ51_PIG Isoform 1 of Small nuclear ribonucleoprotein polypeptide A' OS=Sus scrofa OX=9823 GN=SNRPA1 PE=1 SV=1 CANONICAL=A0A5G2QJ51-1" }, "isoforms": [ { "isoform_ac": "A0A287BJ11-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BJ11/entry", "sequence": { "sequence": "MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKFQSRCWFAS", "length": 162, "header": "tr|A0A287BJ11-1|A0A287BJ11_PIG Computationally mapped isoform of Small nuclear ribonucleoprotein polypeptide A' OS=Sus scrofa OX=9823 GN=SNRPA1 PE=1 SV=1 CANONICAL=A0A5G2QJ51-1" }, "locus": { "chromosome": "1", "start_pos": 145715197, "end_pos": 145707471, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037543.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037543.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056048.1", "url": "https://www.ensembl.org/id/ENSSSCP00000056048.1" } ] } }, { "isoform_ac": "A0A4X1U3W9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1U3W9/entry", "sequence": { "sequence": "SSCGPRYGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARRSKTFNPGAGLPADKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQIPGRERRSGQETVFCLNFQVNGPLTVIPKQFRCYHPRMLE", "length": 248, "header": "tr|A0A4X1U3W9-1|A0A4X1U3W9_PIG Computationally mapped isoform of Small nuclear ribonucleoprotein polypeptide A' OS=Sus scrofa OX=9823 GN=SNRPA1 PE=1 SV=1 CANONICAL=A0A5G2QJ51-1" }, "locus": { "chromosome": "1", "start_pos": 145716100, "end_pos": 145707879, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065709.1", "url": "https://www.ensembl.org/id/ENSSSCT00000065709.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053792.1", "url": "https://www.ensembl.org/id/ENSSSCP00000053792.1" } ] } }, { "isoform_ac": "A0A5G2QJ51-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ51/entry", "sequence": { "sequence": "MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARRSKTFNPGAGLPADKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQIPGRERRSGQETSFDRKNVMSQDSGDGCMQKLKQTLLHAME", "length": 269, "header": "tr|A0A5G2QJ51-1|A0A5G2QJ51_PIG Isoform 1 of Small nuclear ribonucleoprotein polypeptide A' OS=Sus scrofa OX=9823 GN=SNRPA1 PE=1 SV=1 CANONICAL=A0A5G2QJ51-1" }, "locus": { "chromosome": "1", "start_pos": 145716251, "end_pos": 145707471, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076615.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076615.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064487.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064487.1" } ] } }, { "isoform_ac": "A0A5G2QQ73-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQ73/entry", "sequence": { "sequence": "MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKVSISPRVLQERFFPMFAEECS", "length": 174, "header": "tr|A0A5G2QQ73-1|A0A5G2QJ51_PIG Computationally mapped isoform of Small nuclear ribonucleoprotein polypeptide A' OS=Sus scrofa OX=9823 GN=SNRPA1 PE=1 SV=1 CANONICAL=A0A5G2QJ51-1" }, "locus": { "chromosome": "1", "start_pos": 145714562, "end_pos": 145707471, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079477.2", "url": "https://www.ensembl.org/id/ENSSSCT00000079477.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066877.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066877.1" } ] } }, { "isoform_ac": "A0A5G2R0B7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0B7/entry", "sequence": { "sequence": "MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARRSKTFNPGAGLPADKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQIPGRERRSGQETVFCLNFQVNGPLTVIPKQFRCYHPRMLE", "length": 268, "header": "tr|A0A5G2R0B7-1|A0A5G2QJ51_PIG Computationally mapped isoform of Small nuclear ribonucleoprotein polypeptide A' OS=Sus scrofa OX=9823 GN=SNRPA1 PE=1 SV=1 CANONICAL=A0A5G2QJ51-1" }, "locus": { "chromosome": "1", "start_pos": 145716100, "end_pos": 145707471, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072894.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072894.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067641.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067641.1" } ] } }, { "isoform_ac": "A0A5G2R5J9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5J9/entry", "sequence": { "sequence": "VSCSQGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARRSKTFNPGAGLPADKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQIPGRERRSGQETVFCLNFQVNGPLTVIPKQFRCYHPRMLE", "length": 246, "header": "tr|A0A5G2R5J9-1|A0A5G2QJ51_PIG Computationally mapped isoform of Small nuclear ribonucleoprotein polypeptide A' OS=Sus scrofa OX=9823 GN=SNRPA1 PE=1 SV=2 CANONICAL=A0A5G2QJ51-1" }, "locus": { "chromosome": "1", "start_pos": 145716100, "end_pos": 145708555, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074229.2", "url": "https://www.ensembl.org/id/ENSSSCT00000074229.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071600.2", "url": "https://www.ensembl.org/id/ENSSSCP00000071600.2" } ] } }, { "isoform_ac": "A0A8D0P4U3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0P4U3/entry", "sequence": { "sequence": "HCCGPWYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARRSKTFNPGAGLPADKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQIPGRERRSGQETVFCLNFQVNGPLTVIPKQFRCYHPRMLE", "length": 246, "header": "tr|A0A8D0P4U3-1|A0A5G2QJ51_PIG Computationally mapped isoform of Small nuclear ribonucleoprotein polypeptide A' OS=Sus scrofa OX=9823 GN=SNRPA1 PE=1 SV=1 CANONICAL=A0A5G2QJ51-1" }, "locus": { "chromosome": "1", "start_pos": 145716100, "end_pos": 145708242, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077979.2", "url": "https://www.ensembl.org/id/ENSSSCT00000077979.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073693.2", "url": "https://www.ensembl.org/id/ENSSSCP00000073693.2" } ] } }, { "isoform_ac": "F1RWS8-1", "url": "https://www.uniprot.org/uniprotkb/F1RWS8/entry", "sequence": { "sequence": "SSCGPRYGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARRSKTFNPGAGLPADKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQIPGRERRSGPTDDGEEEMEEDTVTNGS", "length": 235, "header": "tr|F1RWS8-1|A0A5G2QJ51_PIG Computationally mapped isoform of Small nuclear ribonucleoprotein polypeptide A' OS=Sus scrofa OX=9823 GN=SNRPA1 PE=1 SV=2 CANONICAL=A0A5G2QJ51-1" }, "locus": { "chromosome": "1", "start_pos": 145718936, "end_pos": 145707879, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000006362.5", "url": "https://www.ensembl.org/id/ENSSSCT00000006362.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000006200.3", "url": "https://www.ensembl.org/id/ENSSSCP00000006200.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved 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scrofa OX=9823 GN=TAF13 PE=3 SV=1 CANONICAL=A0A5G2QFS1-1" }, "locus": { "chromosome": "4", "start_pos": 110990629, "end_pos": 110980864, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022456.4", "url": "https://www.ensembl.org/id/ENSSSCT00000022456.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021947.1", "url": "https://www.ensembl.org/id/ENSSSCP00000021947.1" } ] } }, { "isoform_ac": "A0A5G2QE48-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE48/entry", "sequence": { "sequence": "MCWPLGAQREEKKTFEEESEEIGGGAEGGQGKRKRLFSKELRCMMYGFGDDQNPYTESVDILEDLVIEFITEMTHKAMSIGRQGRVQVEDIVFLIRKDPRKFARVKDLLTMNEELKRARKAFDEANYGS", "length": 129, "header": "tr|A0A5G2QE48-1|A0A5G2QFS1_PIG Computationally mapped isoform of Transcription initiation factor TFIID subunit 13 OS=Sus scrofa OX=9823 GN=TAF13 PE=3 SV=1 CANONICAL=A0A5G2QFS1-1" }, "locus": { "chromosome": "4", "start_pos": 110990629, "end_pos": 110974550, "strand": "-", "evidence": [ { "database": 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pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QTI4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QTI4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100157095", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157095", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": 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"MTARGTASRFLTSVLHNGLGRYVQQLQRLSFSLSRDAPSSRGAREFVEREVTDFARRNPGVVIYVNPRPCCVPRVVAEYLNGAVREESIHCKSVEEIAALVQKLADQSGLDVIRIRKPFHTDSPSIQGQWHPFTNKPTTLGGLRPREVQDPAPAQDAAELLCKGAGPCWHSIVALPQEHVAPIGQLRHWPETVCSCTAEPPARPARPSEYFRRCPLPPPRKQAT", "length": 224, "header": "tr|A0A5G2QI11-1|A0A5G2QI11_PIG Isoform 1 of Large ribosomal subunit protein mL43 OS=Sus scrofa OX=9823 GN=MRPL43 PE=1 SV=2 CANONICAL=A0A5G2QI11-1" }, "isoforms": [ { "isoform_ac": "A0A4X1U2U7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1U2U7/entry", "sequence": { "sequence": "MTARGTASRFLTSVLHNGLGRYVQQLQRLSFSLSRDAPSSRGAREFVEREVTDFARRNPGVVIYVNPRPCCVPRVVAEYLNGAVREESIHCKSVEEIAALVQKLADQSGLDVIRIRKPFHTDSPSIQGQWHPFTNKPTTLGGLRPREVQDPAPAQDIGLKLSAAAQRSPLPGRPDPVSISVGVLFHLPENRPHRRERKPG", "length": 200, "header": "tr|A0A4X1U2U7-1|A0A5G2QI11_PIG Computationally mapped isoform of Large ribosomal subunit protein mL43 OS=Sus scrofa OX=9823 GN=MRPL43 PE=1 SV=1 CANONICAL=A0A5G2QI11-1" }, "locus": { "chromosome": "14", "start_pos": 112070175, "end_pos": 112066341, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069610.1", "url": "https://www.ensembl.org/id/ENSSSCT00000069610.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066598.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066598.1" } ] } }, { "isoform_ac": "A0A5G2QH55-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QH55/entry", "sequence": { "sequence": "MTARGTASRFLTSVLHNGLGRYVQQLQRLSFSLSRDAPSSRGAS", "length": 44, "header": "tr|A0A5G2QH55-1|A0A5G2QI11_PIG Computationally mapped isoform of Large ribosomal subunit protein mL43 OS=Sus scrofa OX=9823 GN=MRPL43 PE=1 SV=1 CANONICAL=A0A5G2QI11-1" }, "locus": { "chromosome": "14", "start_pos": 112070175, "end_pos": 112069736, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067886.1", "url": "https://www.ensembl.org/id/ENSSSCT00000067886.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064113.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064113.1" } ] } }, { "isoform_ac": "A0A5G2QI11-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI11/entry", "sequence": { "sequence": "MTARGTASRFLTSVLHNGLGRYVQQLQRLSFSLSRDAPSSRGAREFVEREVTDFARRNPGVVIYVNPRPCCVPRVVAEYLNGAVREESIHCKSVEEIAALVQKLADQSGLDVIRIRKPFHTDSPSIQGQWHPFTNKPTTLGGLRPREVQDPAPAQDAAELLCKGAGPCWHSIVALPQEHVAPIGQLRHWPETVCSCTAEPPARPARPSEYFRRCPLPPPRKQAT", "length": 224, "header": "tr|A0A5G2QI11-1|A0A5G2QI11_PIG Isoform 1 of Large ribosomal subunit protein mL43 OS=Sus scrofa OX=9823 GN=MRPL43 PE=1 SV=2 CANONICAL=A0A5G2QI11-1" }, "locus": { "chromosome": "14", "start_pos": 112070175, "end_pos": 112066363, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068206.2", "url": "https://www.ensembl.org/id/ENSSSCT00000068206.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064040.2", "url": "https://www.ensembl.org/id/ENSSSCP00000064040.2" } ] } }, { "isoform_ac": "A0A5G2R0F4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0F4/entry", "sequence": { "sequence": "MTARGTASRFLTSVLHNGLGRYVQQLQRLSFSLSRDAPSSRGAREFVEREVTDFARRNPGVVIYVNPRPCCVPRVVAEYLNGAVREESIHCKSVEEIAALVQKLADQSGLDVIRIRKPFHTDSPSIQGQWHPFTNKPTTLGGLRPREVQDPAPAQVQVVLPPRLVHRRHMEPTKREAEPKLLLGIQKSCLFLFLVFTVRGSGCEPSSFYLVDISKI", "length": 216, "header": "tr|A0A5G2R0F4-1|A0A5G2QI11_PIG Computationally mapped isoform of Large ribosomal subunit protein mL43 OS=Sus scrofa OX=9823 GN=MRPL43 PE=1 SV=2 CANONICAL=A0A5G2QI11-1" }, "locus": { "chromosome": "14", "start_pos": 112070175, "end_pos": 112069267, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068869.2", "url": "https://www.ensembl.org/id/ENSSSCT00000068869.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069870.2", "url": "https://www.ensembl.org/id/ENSSSCP00000069870.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QH55", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QH55" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-5389840", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5389840", "resource": "Reactome", "description": "Mitochondrial translation elongation" }, { "id": "R-SSC-5419276", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5419276", "resource": "Reactome", "description": "Mitochondrial translation termination" }, { "id": "R-SSC-9937383", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9937383", "resource": "Reactome", "description": "Mitochondrial ribosome-associated quality control" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "mitochondrial inner membrane", "id": "GO:0005743", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005743", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QI11", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI11" } ], "pmid": "" }, { "name": "ribosome", "id": "GO:0005840", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005840", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QI11", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI11" } ], "pmid": "" }, { "name": "ribonucleoprotein complex", "id": "GO:1990904", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990904", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QI11", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI11" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QI11", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI11" } ], "pmid": "" }, { "name": "mitochondrial large ribosomal subunit", "id": "GO:0005762", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005762", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QI11", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI11" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "structural constituent of ribosome", "id": "GO:0003735", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003735", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QI11", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI11" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "mitochondrial translation", "id": "GO:0032543", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032543", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QI11", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI11" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QI11-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 224, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QI11-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QI11" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QI11", "database": "UniProtKB", 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}, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QPJ3-1", "uniprot_ac": "A0A5G2QPJ3", "uniprot_id": "A0A5G2QPJ3_PIG", "mass": { "chemical_mass": 51633.0, "monoisotopic_mass": 51633.0 }, "refseq": {}, "gene_names": [ { "name": "TOX2", "type": "recommended", "evidence": [ { "id": "A0A5G2QPJ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPJ3" } ] } ], "protein_names": [ { "name": "TOX high mobility group box family member 2", "type": "synonym", "evidence": [ { "id": "A0A5G2QPJ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPJ3/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QPJ3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPJ3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TOX2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPJ3", "locus": { "chromosome": "17", "start_pos": 46577072, "end_pos": 46433025, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000022202", "url": "https://www.ensembl.org/id/ENSSSCG00000022202" } ] } } ], "crossref": [ { "id": "A0A5G2QPJ3", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QPJ3", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000022202", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000022202", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd21995", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd21995", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR009071", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009071", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036910", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036910", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051365", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051365", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR45781", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45781", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45781:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45781:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00505", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00505", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2Q8X2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8X2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q8X2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8X2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QPJ3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPJ3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QPJ3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPJ3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L726", "url": "https://www.uniprot.org/uniprotkb/I3L726", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L726-1", "url": "https://www.uniprot.org/uniprotkb/I3L726-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MQQNRTEAVAGAFSRCRGFCGMRLGLLLLARRWCIAGVFQQKFDGESAYVGMSDGNPELLSTSQTYTSQNESNEDYEIPPITPPNLPPSLLHLGDHEAGYHSLCHSLAPNGLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPAMLASHMSALSQSQLISQMGIRSGITHSSPSPPGSKSATPSPSSSTQEEESEAHFKMSGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSTPLHQQLPLPPHAQGTLLTPPVSMSPAPQPPVLPAPMALQVQLAMSPSPPGPQDFPHISEFPSGSGSRSPGPSNPTSSGDWDSSYPSAECGISTCSLLPRDKSLYLT", "length": 487, "header": "tr|A0A5G2QPJ3-1|A0A5G2QPJ3_PIG Isoform 1 of TOX high mobility group box family member 2 OS=Sus 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"MDVRLYPSAPAVGARPGAEPAGLAPLDYYHCGKFDGESAYVGMSDGNPELLSTSQTYTSQNESNEDYEIPPITPPNLPPSLLHLGDHEAGYHSLCHSLAPNGLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPAMLASHMSALSQSQLISQMGIRSGITHSSPSPPGSKSATPSPSSSTQEEESEAHFKMSGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSTPLHQQLPLPPHAQGTLLTPPVSMSPAPQPPVLPAPMALQVQLAMSPSPPGPQDFPHISEFPSGSGSRSPGPSNPTSSGDWDSSYPSAECGISTCSLLPRDKSLYLT", "length": 505, "header": "tr|I3L726-1|I3L726_PIG Computationally mapped isoform of TOX high mobility group box family member 2 OS=Sus scrofa OX=9823 GN=TOX2 PE=4 SV=3 CANONICAL=A0A5G2QPJ3-1" }, "locus": { "chromosome": "17", "start_pos": 46576176, "end_pos": 46433064, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030459.4", "url": "https://www.ensembl.org/id/ENSSSCT00000030459.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019830.3", 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"authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA06", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA06" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-181429", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-181429", "resource": "Reactome", "description": "Serotonin Neurotransmitter Release Cycle" }, { "id": "R-SSC-181430", "name": "", "url": 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CO(2), and thereby links cytoplasmic glycolysis and the mitochondrial tricarboxylic acid (TCA) cycle. It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and dihydrolipoamide dehydrogenase (E3);. Within this complex, the catalytic function of this enzyme is to accept, and to transfer to coenzyme A, acetyl groups from acetyl-lipoyl moiety generated by the pyruvate dehydrogenase, leading to acetyl-CoA formation.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FJJ4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJJ4#function" }, { "database": "UniProtKB", "id": "ARBA00094508", "url": "https://www.uniprot.org/uniprotkb/ARBA00094508#function" }, { "database": "UniProtKB", "id": "A0A5G2QFC4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFC4#function" }, { "database": "UniProtKB", "id": "A0A5G2QK83", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QK83#function" }, { "database": "UniProtKB", "id": "A0A5G2QLQ1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLQ1#function" }, { "database": "UniProtKB", "id": "A0A5G2R3I6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3I6#function" }, { "database": "UniProtKB", "id": "F1SMB2", "url": "https://www.uniprot.org/uniprotkb/F1SMB2#function" }, { "database": "UniProtKB", "id": "A0A5G2QIE6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIE6#function" }, { "database": "UniProtKB", "id": "A0A5G2R750", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R750#function" } ] }, { "annotation": "The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FJJ4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJJ4#function" }, { "database": "UniProtKB", "id": "RU361137", "url": "https://www.uniprot.org/uniprotkb/RU361137#function" }, { "database": "UniProtKB", "id": "A0A5G2QFC4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFC4#function" }, { "database": "UniProtKB", "id": "A0A5G2QK83", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QK83#function" }, { "database": "UniProtKB", "id": "A0A5G2QLQ1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLQ1#function" }, { "database": "UniProtKB", "id": "A0A5G2R3I6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3I6#function" }, { "database": "UniProtKB", "id": "F1SMB2", "url": "https://www.uniprot.org/uniprotkb/F1SMB2#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLQ1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLQ1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DLAT", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLQ1", "locus": { "chromosome": "9", "start_pos": 39796806, "end_pos": 39738564, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015030", "url": "https://www.ensembl.org/id/ENSSSCG00000015030" } ] } } ], "crossref": [ { "id": "A0A5G2QLQ1", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QLQ1", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000015030", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015030", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd06849", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06849", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "9J1W", "url": "https://www.ncbi.nlm.nih.gov/Structure/icn3d/?mmdbid=9J1W&bu=0", "database": "iCn3D", "categories": [ "3D Structure" ] }, { "id": "IPR000089", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000089", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001078", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001078", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003016", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003016", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004167", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004167", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006257", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006257", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011053", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011053", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023213", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023213", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036625", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036625", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045257", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045257", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "TMEFESF", "url": "https://omabrowser.org/oma/group/TMEFESF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR23151", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23151", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23151:SF90", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23151:SF90", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "pdb_00009j1w", "url": "https://www.rcsb.org/structure/pdb_00009j1w", "database": "PDB", "categories": [ "3D Structure" ] }, { "id": "9J1W", "url": "https://www.rcsb.org/structure/9J1W", "database": "PDB", "categories": [ "3D Structure" ] }, { "id": "PF00198", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00198", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00364", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00364", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02817", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02817", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-204174", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-204174", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-5362517", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5362517", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9861559", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9861559", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "17017", "url": "https://www.rhea-db.org/rhea/17017", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QFC4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFC4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFC4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFC4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QIE6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIE6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QIE6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIE6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QK83", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QK83", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QK83-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QK83-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QLQ1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLQ1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QLQ1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLQ1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R3I6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3I6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R3I6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3I6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R750", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R750", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R750-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R750-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FJJ4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJJ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FJJ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJJ4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMB2", "url": "https://www.uniprot.org/uniprotkb/F1SMB2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMB2-1", "url": "https://www.uniprot.org/uniprotkb/F1SMB2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MWRVCARRAQNAAPRAGFGARWTALREEPGAPCAAPRAGSVPARCSSTTRGYGRSRALCGWSASSWATPQNRILLQLWGSPNRRWYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGDKINEGELIAEVETDKATVGFESLEECYMAKILVAEGTRDVPVGAIICITVEKPEDIEAFKNYTLDSSAAPAPQAAPAPTPAAAAPAPTPSAQAPGSSYPTHMQVVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILIPEGTRDVPLGTPLCIIVEKEADIPAFADYRPTEVTDLKPPAPPPTPSPVTPVPPAPQPVAPTPAATRPATPAGPKGRLFVSPLAKKLASEKGIDLTQIKGTGPDGRIIKKDIDSFVPTKAAPPPAAAVPPPSPGVAPVPTGVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSVDVNMGEVLLVRKELNKMLEGRSKISVNDFIIKASALACLKVPEANSSWLDTVIRQNHVVDISVAVSTPAGLITPIVFNAHIKGLETIANDVVSLATKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAVGASEDRLFPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL", "length": 647, "header": "tr|A0A5G2QLQ1-1|A0A5G2QLQ1_PIG Isoform 1 of Acetyltransferase component of pyruvate dehydrogenase complex OS=Sus scrofa OX=9823 GN=DLAT PE=1 SV=1 CANONICAL=A0A5G2QLQ1-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QFC4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFC4/entry", "sequence": { "sequence": "MWRVCARRAQNAAPRAGFGARWTALREEPGAPCAAPRAGSVPARCSSTTRGYGRSRALCGWSASSWATPQNRILLQLWGSPNRRWYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGDKINEGELIAEVETDKATVGFESLEECYLAKILIPEGTRDVPLGTPLCIIVEKEADIPAFADYRPTEVTDLKPPAPPPTPSPVTPVPPAPQPVAPTPAATRPATPAGPKGRLFVSPLAKKLASEKGIDLTQIKGTGPDGRIIKKDIDSFVPTKAAPPPAAAVPPPSPGVAPVPTGVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSVDVNMGEVLLVRKELNKMLEGRSKISVNDFIIKASALACLKVPEANSSWLDTVIRQNHVVDISVAVSTPAGLITPIVFNAHIKGLETIANDVVSLATKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAVGASEDRLFPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL", "length": 520, "header": "tr|A0A5G2QFC4-1|A0A5G2QLQ1_PIG Computationally mapped isoform of Acetyltransferase component of pyruvate dehydrogenase complex OS=Sus scrofa OX=9823 GN=DLAT PE=1 SV=1 CANONICAL=A0A5G2QLQ1-1" }, "locus": { "chromosome": "9", "start_pos": 39763218, "end_pos": 39738640, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074026.2", "url": "https://www.ensembl.org/id/ENSSSCT00000074026.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062900.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062900.1" } ] } }, { "isoform_ac": "A0A5G2QIE6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIE6/entry", "sequence": { "sequence": "MWRVCARRAQNAAPRAGFGARWTALREEPGAPCAAPRAGSVPARCSSTTRGYGRSRALCGWSASSWATPQNRILLQLWGSPNRRWYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGDKINEGELIAEVETDKATVGFESLEECYMAKILVAEGTRDVPVGAIICITVEKPEDIEAFKNYTLDSSAAPAPQAAPAPTPAAAAPAPTPSAQAPGSSYPTHMQVVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILIPEGTRDVPLGTPLCIIVEKEADIPAFADYRPTEVTDLKPPAPPPTPSPVTPVPPAPQPVAPTPAATRPATPAGPKGRLFVSPLAKKLASEKGIDLTQIKGTGPDGRIIKKDIDSFVPTKAAPPPAAAVPPPSPGVAPVPTGVFTDIPISNIRRMLEGRSKISVNDFIIKASALACLKVPEANSSWLDTVIRQNHVVDISVAVSTPAGLITPIVFNAHIKGLETIANDVVSLATKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAVGASEDRLFPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL", "length": 611, "header": "tr|A0A5G2QIE6-1|A0A5G2QIE6_PIG Computationally mapped isoform of Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex OS=Sus scrofa OX=9823 GN=DLAT PE=1 SV=2 CANONICAL=A0A5G2QLQ1-1" }, "locus": { "chromosome": "9", "start_pos": 39763218, "end_pos": 39738640, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088808.2", "url": "https://www.ensembl.org/id/ENSSSCT00000088808.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064570.2", "url": "https://www.ensembl.org/id/ENSSSCP00000064570.2" } ] } }, { "isoform_ac": "A0A5G2QK83-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QK83/entry", "sequence": { "sequence": "MWRVCARRAQNAAPRAGFGARWTALREEPGAPCAAPRAGSVPARCSSTTRGYGSSWATPQNRILLQLWGSPNRRWYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGDKINEGELIAEVETDKATVGFESLEECYMAKILVAEGTRDVPVGAIICITVEKPEDIEAFKNYTLDSSAAPAPQAAPAPTPAAAAPAPTPSAQAPGSSYPTHMQVVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILIPEGTRDVPLGTPLCIIVEKEADIPAFADYRPTEVTDLKPPAPPPTPSPVTPVPPAPQPVAPTPAATRPATPAGPKGRLFVSPLAKKLASEKGIDLTQIKGTGPDGRIIKKDIDSFVPTKAAPPPAAAVPPPSPGVAPVPTGVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSVDVNMGEVLLVRKELNKMLEGRSKISVNDFIIKASALACLKVPEANSSWLDTVIRQNHVVDISVAVSTPAGLITPIVFNAHIKGLETIANDVVSLATKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAVGASEDRLFPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL", "length": 637, "header": "tr|A0A5G2QK83-1|A0A5G2QK83_PIG Computationally mapped isoform of Acetyltransferase component of pyruvate dehydrogenase complex OS=Sus scrofa OX=9823 GN=DLAT PE=1 SV=2 CANONICAL=A0A5G2QLQ1-1" }, "locus": { "chromosome": "9", "start_pos": 39763218, "end_pos": 39738640, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076686.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076686.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064393.2", "url": "https://www.ensembl.org/id/ENSSSCP00000064393.2" } ] } }, { "isoform_ac": "A0A5G2QLQ1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLQ1/entry", "sequence": { "sequence": "MWRVCARRAQNAAPRAGFGARWTALREEPGAPCAAPRAGSVPARCSSTTRGYGRSRALCGWSASSWATPQNRILLQLWGSPNRRWYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGDKINEGELIAEVETDKATVGFESLEECYMAKILVAEGTRDVPVGAIICITVEKPEDIEAFKNYTLDSSAAPAPQAAPAPTPAAAAPAPTPSAQAPGSSYPTHMQVVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILIPEGTRDVPLGTPLCIIVEKEADIPAFADYRPTEVTDLKPPAPPPTPSPVTPVPPAPQPVAPTPAATRPATPAGPKGRLFVSPLAKKLASEKGIDLTQIKGTGPDGRIIKKDIDSFVPTKAAPPPAAAVPPPSPGVAPVPTGVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSVDVNMGEVLLVRKELNKMLEGRSKISVNDFIIKASALACLKVPEANSSWLDTVIRQNHVVDISVAVSTPAGLITPIVFNAHIKGLETIANDVVSLATKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAVGASEDRLFPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL", "length": 647, "header": "tr|A0A5G2QLQ1-1|A0A5G2QLQ1_PIG Isoform 1 of Acetyltransferase component of pyruvate dehydrogenase complex OS=Sus scrofa OX=9823 GN=DLAT PE=1 SV=1 CANONICAL=A0A5G2QLQ1-1" }, "locus": { "chromosome": "9", "start_pos": 39763218, "end_pos": 39738640, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078875.2", "url": "https://www.ensembl.org/id/ENSSSCT00000078875.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063005.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063005.1" } ] } }, { "isoform_ac": "A0A5G2R3I6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3I6/entry", "sequence": { "sequence": "MWRVCARRAQNAAPRAGFGARWTALREEPGAPCAAPRAGSVPARCSSTTRGYGRSRALCGWSASSWATPQNRILLQLWGSPNRRWYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGDKINEGELIAEVETDKATVGFESLEECYMAKILVAEGTRDVPVGAIICITVEKPEDIEAFKNYTLDSSAAPAPQAAPAPTPAAAAPAPTPSAQAPGSSYPTHMQEQPQLQQWQCQILNHCITREVVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILIPEGTRDVPLGTPLCIIVEKEADIPAFADYRPTEVTDLKPPAPPPTPSPVTPVPPAPQPVAPTPAATRPATPAGPKGRLFVSPLAKKLASEKGIDLTQIKGTGPDGRIIKKDIDSFVPTKAAPPPAAAVPPPSPGVAPVPTGVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSVDVNMGEVLLVRKELNKMLEGRSKISVNDFIIKASALACLKVPEANSSWLDTVIRQNHVVDISVAVSTPAGLITPIVFNAHIKGLETIANDVVSLATKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAVGASEDRLFPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL", "length": 667, "header": "tr|A0A5G2R3I6-1|A0A5G2QLQ1_PIG Computationally mapped isoform of Acetyltransferase component of pyruvate dehydrogenase complex OS=Sus scrofa OX=9823 GN=DLAT PE=1 SV=1 CANONICAL=A0A5G2QLQ1-1" }, "locus": { "chromosome": "9", "start_pos": 39763218, "end_pos": 39738640, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090446.1", "url": "https://www.ensembl.org/id/ENSSSCT00000090446.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070907.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070907.1" } ] } }, { "isoform_ac": "A0A5G2R750-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R750/entry", "sequence": { "sequence": "MWRVCARRAQNAAPRAGFGARWTALREEPGAPCAAPRAGSVPARCSSTTRGYGRSRALCGWSASSWATPQNRILLQLWGSPNRRWYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGDKINEGELIAEVETDKATVGFESLEECYMAKILVAEGTRDVPVGAIICITVEKPEDIEAFKNYTLDSSAAPAPQAAPAPTPAAAAPAPTPSAQAPGSSYPTHMQVVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILIPEGTRDVPLGTPLCIIVEKEADIPAFADYRPTEVTDLKPPAPPPTPSPVGTGPDGRIIKKDIDSFVPTKAAPPPAAAVPPPSPGVAPVPTGVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSVDVNMGEVLLVRKELNKMLEGRSKISVNDFIIKASALACLKVPEANSSWLDTVIRQNHVVDISVAVSTPAGLITPIVFNAHIKGLETIANDVVSLATKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAVGASEDRLFPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL", "length": 597, "header": "tr|A0A5G2R750-1|A0A5G2QLQ1_PIG Computationally mapped isoform of Acetyltransferase component of pyruvate dehydrogenase complex OS=Sus scrofa OX=9823 GN=DLAT PE=1 SV=1 CANONICAL=A0A5G2QLQ1-1" }, "locus": { "chromosome": "9", "start_pos": 39763218, "end_pos": 39738640, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080048.1", "url": "https://www.ensembl.org/id/ENSSSCT00000080048.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069957.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069957.1" } ] } }, { "isoform_ac": "A0A8W4FJJ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJJ4/entry", "sequence": { "sequence": "MWRVCARRAQNAAPRAGFGARWTALREEPGAPCAAPRAGSVPARCSSTTRGYGRSRALCGWSASSWATPQNRILLQLWGSPNRRWYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGDKINEGELIAEVVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILIPEGTRDVPLGTPLCIIVEKEADIPAFADYRPTEVTDLKPPAPPPTPSPVTPVPPAPQPVAPTPAATRPATPAGPKGRLFVSPLAKKLASEKGIDLTQIKGTGPDGRIIKKDIDSFVPTKAAPPPAAAVPPPSPGVAPVPTGVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSVDVNMGEVLLVRKELNKMLEGRSKISVNDFIIKASALACLKVPEANSSWLDTVIRQNHVVDISVAVSTPAGLITPIVFNAHIKGLETIANDVVSLATKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAVGASEDRLFPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL", "length": 554, "header": "tr|A0A8W4FJJ4-1|A0A5G2QLQ1_PIG Computationally mapped isoform of Acetyltransferase component of pyruvate dehydrogenase complex OS=Sus scrofa OX=9823 GN=DLAT PE=1 SV=1 CANONICAL=A0A5G2QLQ1-1" }, "locus": { "chromosome": "9", "start_pos": 39763218, "end_pos": 39738640, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092367.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092367.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079072.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079072.1" } ] } }, { "isoform_ac": "F1SMB2-1", "url": "https://www.uniprot.org/uniprotkb/F1SMB2/entry", "sequence": { "sequence": "MWRVCARRAQNAAPRAGFGARWTALREEPGAPCAAPRAGSVPARCSSTTRGYGRSRALCGWSASSWATPQNRILLQLWGSPNRRWYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGDKINEGELIAEVETDKATVGFESLEECYMAKILVAEGTRDVPVGAIICITVEKPEDIEAFKNYTLDSSAAPAPQAAPAPTPAAAAPAPTPSAQAPGSSYPTHMQVVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIAPQPVAPTPAATRPATPAGPKGRLFVSPLAKKLASEKGIDLTQIKGTGPDGRIIKKDIDSFVPTKAAPPPAAAVPPPSPGVAPVPTGVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSVDVNMGEVLLVRKELNKMLEGRSKISVNDFIIKASALACLKVPEANSSWLDTVIRQNHVVDISVAVSTPAGLITPIVFNAHIKGLETIANDVVSLATKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAVGASEDRLFPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL", "length": 578, "header": "tr|F1SMB2-1|F1SMB2_PIG Computationally mapped isoform of Acetyltransferase component of pyruvate dehydrogenase complex OS=Sus scrofa OX=9823 GN=DLAT PE=1 SV=4 CANONICAL=A0A5G2QLQ1-1" }, "locus": { "chromosome": "9", "start_pos": 39763218, "end_pos": 39738640, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016395.5", "url": "https://www.ensembl.org/id/ENSSSCT00000016395.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000015954.4", "url": "https://www.ensembl.org/id/ENSSSCP00000015954.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 196, "start_aa": "Thr", "end_pos": 196, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr196", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 205, "start_aa": "Thr", "end_pos": 205, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr205", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 322, "start_aa": "Thr", "end_pos": 322, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr322", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 327, "start_aa": "Thr", "end_pos": 327, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr327", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 339, "start_aa": "Thr", "end_pos": 339, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr339", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 347, "start_aa": "Thr", "end_pos": 347, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr347", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLQ1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLQ1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] }, { "title": "Dynamics of the mammalian pyruvate dehydrogenase complex revealed by in-situ structural analysis.", "journal": "Nat. Commun.", "date": "2025", "authors": "Wang Chen, Ma Cheng, Xu Yuanyou, Chang Shenghai, Wu Hangjun, Yan Chunlan, Chen Jinghua, Wu Yongping, An Shaoya, Xu Jiaqi, Han Qin, Jiang Yujie, Jiang Zhinong, Chu Xiakun, Gao Haichun, Zhang Xing, Chang Yunjie", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLQ1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLQ1" } ], "reference": [ { "type": "PubMed", "id": "39843418", "url": "https://glygen.org/publication/PubMed/39843418" } ] } ], "pathway": [ { "id": "R-SSC-204174", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-204174", "resource": "Reactome", "description": "Regulation of pyruvate dehydrogenase (PDH) complex" }, { "id": "R-SSC-5362517", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5362517", "resource": "Reactome", "description": "Signaling by Retinoic Acid" }, { "id": "R-SSC-9861559", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9861559", "resource": "Reactome", "description": "PDH complex synthesizes acetyl-CoA from PYR" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZWH3-1", "protein_name": "Acetyltransferase component of pyruvate dehydrogenase complex", "gene_name": "DLAT", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MWRVFARRVAPGAAGLARGCRALSATGVGRAAAGGAVAPGRGPARRPGELLPPPSWPRFVPCRRCSLPAHQKVALPALSPTMQMGTIARWEKKEGDKIGEGDLIAEVETDKATVGFESLEECYLAKILVPEGTRDVPIGAIICITVEKPEHVDAFKNYTLDSAASAPLAASVPPPPAAAPSPPPPPSPQAPGSSYPPHMQVALPALSPTMTMGTVQRWEKKVGEKLNEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGTTLCIIVEKESDIPAFADYQETAVTDMKAQVPPPPPSPPVVATPAAAALPPQPAAPPTPAVPTAGPPPRKGRILVSPLAKKLAAEKGIDLAQVKGTGPDGRITKKDVETFVPPKVAPAPAVEAVPAAAAVAAAPVGTFTDIPISNIRRVIAQRLMQSKQTIPHYYLSVDVNMGEVLVLRKELNQVVSDNVKLSVNDFIIKASALACLKVPEANSSWMDTVIRQNHVVDVSVAVSTPAGLITPIVFNAHIKGLASISKDVVSLAAKAREGKLQPHEFQGGTFTISNLGMYGIKNFSAIINPPQACILAVGSSEKKLVPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFKNFLEKPVTMLL", "length": 632 }, "evidence": [ { "id": "A0A5G2QLQ1", "url": "https://omabrowser.org/oma/group/A0A5G2QLQ1/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3H2H5-1", "protein_name": "Acetyltransferase component of pyruvate dehydrogenase complex", "gene_name": "Dlat", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MWRVCARRAQSAVPRAGLGARWAVLKEGPGAPCGSPRAGPAAARCSSGTPSYGVRLLCGWSSGSDTAPHNRLLRQLLGSPGRRSYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGEKINEGDLIAEVETDKATVGFESLEECYMAKILVAEGTRDVPIGSIICITVGKAEDIEAFKNYTLDSAAATTPQAAASAPTPAPAASAASAAACAKAPGSSYPPHMQVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVAEGTRDVPLGTPLCIIVEKQEDIAAFADYRPTEVTSLKPQAPPPVPTPVAAAPPTAQPLAPTPSALPAGPKGRVFVSPLAKKLAAERGIDLTQVKGTGPEGRIIKKDIDSFVPSKAAPAPAAAVAPPGPSAAPAPAAGVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSIDVNMGEVLLVRKELNKMLEGKGKISVNDFIIKASALACLKVPEANSSWMDTVIRQNHVVDVSVAVSTPAGLITPIVFNAHIKGLETIASDVVSLASKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAIGASEDKLVPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFKKYLEKPITMLL", "length": 646 }, "evidence": [ { "id": "A0A5G2QLQ1", "url": "https://omabrowser.org/oma/group/A0A5G2QLQ1/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P08461-1", "protein_name": "Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial", "gene_name": "Dlat", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWRVCARRVQSAVPRAGFRARWATLKGPRTGPAAVRCGSGIPSYGVRSLCGWSYGSATVPRNRILQQLLGSPSRRSYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGEKISEGDLIAEVETDKATVGFESLEECYMAKILVPEGTRDVPVGSIICITVEKPQDIEAFKNYTLDSATAATQAAPAPAAAPAAAPAAPSASAPGSSYPVHMQIVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVEKQEDIAAFADYRPTEVTSLKPQAPPPVPPPVAAVPPIPQPLAPTPSAAPAGPKGRVFVSPLAKKLAAEKGIDLTQVKGTGPEGRIIKKDIDSFVPTKAAPAAAAAAPPGPRVAPTPAGVFIDIPISNIRRVIAQRLMQSKQTIPHYYLSVDVNMGEVLLVRKELNKMLEGKGKISVNDFIIKASALACLKVPEANSSWMDTVIRQNHVVDVSVAVSTPAGLITPIVFNAHIKGLETIASDVVSLASKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAIGASEDKLIPADNEKGFDVASVMSVTLSCDHRVVDGAVGAQWLAEFKKYLEKPVTMLL", "length": 632 }, "evidence": [ { "id": "A0A5G2QLQ1", "url": "https://omabrowser.org/oma/group/A0A5G2QLQ1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P10515-1", "protein_name": "Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial", "gene_name": "DLAT", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MWRVCARRAQNVAPWAGLEARWTALQEVPGTPRVTSRSGPAPARRNSVTTGYGGVRALCGWTPSSGATPRNRLLLQLLGSPGRRYYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGDKINEGDLIAEVETDKATVGFESLEECYMAKILVAEGTRDVPIGAIICITVGKPEDIEAFKNYTLDSSAAPTPQAAPAPTPAATASPPTPSAQAPGSSYPPHMQVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVEKEADISAFADYRPTEVTDLKPQVPPPTPPPVAAVPPTPQPLAPTPSAPCPATPAGPKGRVFVSPLAKKLAVEKGIDLTQVKGTGPDGRITKKDIDSFVPSKVAPAPAAVVPPTGPGMAPVPTGVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSIDVNMGEVLLVRKELNKILEGRSKISVNDFIIKASALACLKVPEANSSWMDTVIRQNHVVDVSVAVSTPAGLITPIVFNAHIKGVETIANDVVSLATKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAIGASEDKLVPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL", "length": 647 }, "evidence": [ { "id": "A0A5G2QLQ1", "url": "https://omabrowser.org/oma/group/A0A5G2QLQ1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P11180-1", "protein_name": "Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex", "gene_name": "DLAT", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MWRVCARRAQNAAPRAGFGARWTAFREEPGAPCVTPQAGSALARCSSKTPGYGRVRALCGWSPVSRATPRNRVLLQLWGSPSRRWYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGEKINEGELIAEVETDKATVGFESVEECYMAKILVAEGTRDVPVGAIICITVDKPEDVEAFKNYTLDSSAAPAPPAAPAPTPAAPAPSPTPSAQAPGSSYPTHMQVLLPALSPTMTMGTVQRWEKKVGEKLNEGDLLAEIETDKATIGFEVQEEGYLAKILIPEGTRDVPLGTPLCIIVEKEADIPAFADYRPAEVTDLKPPAPPPIPSPAAPVPPAPQPVAPPPSAPRPAAPAGPKGRVFVSPLAKKLAAEKGIDLTQVKGTGPDGRIIKKDIDSFVPTKAAPTPAAAVPPPSPGVAPVPTGVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSIDVNMGEVLLVRKELNKMLEGKSKISVNDFIIKASALACLKVPEANSSWMDTVIRQNHVVDISVAVSTPAGLITPIVFNAHIKGLETIANDVVSLATKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAIGASEDRLVPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL", "length": 647 }, "evidence": [ { "id": "A0A5G2QLQ1", "url": "https://omabrowser.org/oma/group/A0A5G2QLQ1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P12695-1", "protein_name": "Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial", "gene_name": "LAT1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSAFVRVVPRISRSSVLTRSLRLQLRCYASYPEHTIIGMPALSPTMTQGNLAAWTKKEGDQLSPGEVIAEIETDKAQMDFEFQEDGYLAKILVPEGTKDIPVNKPIAVYVEDKADVPAFKDFKLEDSGSDSKTSTKAQPAEPQAEKKQEAPAEETKTSAPEAKKSDVAAPQGRIFASPLAKTIALEKGISLKDVHGTGPRGRITKADIESYLEKSSKQSSQTSGAAAATPAAATSSTTAGSAPSPSSTASYEDVPISTMRSIIGERLLQSTQGIPSYIVSSKISISKLLKLRQSLNATANDKYKLSINDLLVKAITVAAKRVPDANAYWLPNENVIRKFKNVDVSVAVATPTGLLTPIVKNCEAKGLSQISNEIKELVKRARINKLAPEEFQGGTICISNMGMNNAVNMFTSIINPPQSTILAIATVERVAVEDAAAENGFSFDNQVTITGTFDHRTIDGAKGAEFMKELKTVIENPLEMLL", "length": 482 }, "evidence": [ { "id": "A0A5G2QLQ1", "url": "https://omabrowser.org/oma/group/A0A5G2QLQ1/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P36413-1", "protein_name": "Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial", "gene_name": "pdhC", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLRAINQNSAKVVKSLKQQLVVLEATNVVAYTGTKSFTTTKTFNNTQTKPKIFTSSNVLSFSSPSSSNVFSEILNKRSYSSKGKEITMPALSPSMTEGNIVQWKKKEGDQIKAGDVIAEVETDKATMDFQYEDGNGYLAKILIPEGTKGIEINKPIAIIVSKKEDIESAVKNYKPSSQASSTPVQEEAPKPKQEAPKKSTKTYPAHKVVGMPALSPSMETGGIASWTKKEGDQIKAGDAIAEVETDKATMDFQYEDGNGYLAKILVPGGTSGIQINQPVCIIVKNKEDCDKFADYSVEEQSSSSSSSSQESTPSSSSSSSQESTPSQSSSQQTTRKSGERIFATPAARFEASSKGYDLSAINGTGPNNRILKADVLEFVPQKQEVAQQQQQQTTTTTKKPTTPTSSGEFTDIPHSNIRKVTAARLTESKQTIPHYYLTMECRVDKLLKLRSELNAMNTVKISVNDFIVKASAAALRDNPVVNSTWTDQFIRRYHNIDINVAVNTPQGLFTPIVRGVDMKGLNSISTSVKQLAEKAQNGKLHPSEFESGTFTISNLGMLGIKQFAAVINPPQAAILAVGTTETRVVLSNKPDSPYETATILSVTLSCDHRVIDGAVGAEWLKSFKDYVENPIKLIL", "length": 635 }, "evidence": [ { "id": "A0A5G2QLQ1", "url": "https://omabrowser.org/oma/group/A0A5G2QLQ1/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8BMF4-1", "protein_name": "Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial", "gene_name": "Dlat", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRVCARRARSAVPRDGFRARWAALKEGPGAPCGSPRIGPAAVRCGSGIPRYGVRSLCGWSSGSGTVPRNRLLRQLLGSPSRRSYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGEKISEGDLIAEVETDKATVGFESLEECYMAKILVPEGTRDVPVGSIICITVEKPQDIEAFKNYTLDLAAAAAPQAAPAAAPAPAAAPAAPSASAPGSSYPTHMQIVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGAPLCIIVEKQEDIAAFADYRPTEVTSLKPQAAPPAPPPVAAVPPTPQPVAPTPSAAPAGPKGRVFVSPLAKKLAAEKGIDLTQVKGTGPEGRIIKKDIDSFVPSKAAPAAAAAMAPPGPRVAPAPAGVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSVDVNMGEVLLVRKELNKMLEGKGKISVNDFIIKASALACLKVPEANSSWMDTVIRQNHVVDVSVAVSTPAGLITPIVFNAHIKGLETIASDVVSLASKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAIGASEDKLIPADNEKGFDVASVMSVTLSCDHRVVDGAVGAQWLAEFKKYLEKPITMLL", "length": 642 }, "evidence": [ { "id": "A0A5G2QLQ1", "url": "https://omabrowser.org/oma/group/A0A5G2QLQ1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9VM14-1", "protein_name": "dihydrolipoyllysine-residue acetyltransferase", "gene_name": "Dlat", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MLRSLATTRNELGALRSVLLRSNNATYVRRSTGNVVVRALSSQLINSRKLQSIRSKLNTSQSPVTWSYNFARAYANLPEHIRVPLPALSPTMERGSIVSWEKKEGDKLNEGDLLCEIETDKATMGFETPEEGFLAKILIQGGTKDVPVGQLLCIIVPDQGSVAAFANFKDDGAAAAPAAPAAAPAPAPAAAAAPPPPPPPAAAPAAAAPPPAPAAAPAAAGTGRVYASPMAKRLAEAQQLRLQGKGSGVHGSIKSGDLAGQKAAAKPAAAAPAKAPRAAGARYEDIPVTNMRAVIAKRLLESKTQLPHYYVTVQCQVDKLLKFRAKVNKKYEKQGARVSVNDFIIKAVAIASLKVPEANSAWMDTVIRKYDDVDVSVAVSTDKGLITPIVFNADRKGVLEISKDVKALAAKARDNKLQPHEFQGGTISVSNLGMFGVNQFAAVINPPQSCILAIGTTTKQLVADPDSLKGFKEVNMLTVTLSADHRVVDGAVAARWLQHFRDYMEDPSNMVL", "length": 512 }, "evidence": [ { "id": "A0A5G2QLQ1", "url": "https://omabrowser.org/oma/group/A0A5G2QLQ1/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "mitochondrial matrix", "id": "GO:0005759", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005759", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLQ1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLQ1" } ], "pmid": "" }, { "name": "pyruvate dehydrogenase complex", "id": "GO:0045254", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045254", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLQ1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLQ1" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLQ1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLQ1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "glucose metabolic process", "id": "GO:0006006", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006006", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLQ1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLQ1" } ], "pmid": "" }, { "name": "pyruvate decarboxylation to acetyl-CoA", "id": "GO:0006086", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006086", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLQ1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLQ1" } ], "pmid": "" }, { "name": "pyruvate catabolic process", "id": "GO:0042867", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042867", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLQ1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLQ1" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "dihydrolipoyllysine-residue acetyltransferase activity", "id": "GO:0004742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004742", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLQ1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLQ1" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLQ1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLQ1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 178, "end_pos": 180, "annotation": "n_glycosylation_sequon" }, { "start_pos": 495, "end_pos": 497, "annotation": "n_glycosylation_sequon" }, { "start_pos": 575, "end_pos": 577, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "17017", "name": "", "equation": "N(6)-[(R)-dihydrolipoyl]-L-lysyl-[protein] + acetyl-CoA = N(6)-[(R)-S(8)-acetyldihydrolipoyl]-L-lysyl-[protein] + CoA", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "17017", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/17017" } ] }, { "id": "R-SSC-203946", "name": "PDK isozymes phosphorylate PDHC subunit E1", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-203946", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-203946" } ] }, { "id": "R-SSC-204169", "name": "PDP1,2 dephosphorylate p-lipo-PDH", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-204169", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-204169" } ] }, { "id": "R-SSC-9861616", "name": "DLD dimer dehydrogenates dihydrolipoyl", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [ "R-SSC-9861664" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9861616", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9861616" } ] }, { "id": "R-SSC-9861626", "name": "SIRT4 cleaves lipoyl from DLAT", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [], "output_participant_list": [ "R-ALL-9861625", "R-SSC-6792585", "R-ALL-5688274" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9861626", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9861626" } ] }, { "id": "R-SSC-9861667", "name": "DLAT trimer transfers acetyl to CoA", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial inner membrane, mitochondrial matrix", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9861667", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9861667" } ] }, { "id": "R-SSC-9861734", "name": "PDH E1 decarboxylates PYR, transferring acetyl to DLAT", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial inner membrane, mitochondrial matrix", "input_participant_list": [ "R-SSC-69969" ], "output_participant_list": [ "R-SSC-9861594" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9861734", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9861734" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-5688274", "participant_name": "NAM [mitochondrial matrix]", "crossref": [ { "id": "HMDB0001406", "database": "HMDB Metabolite", "url": "" }, { "id": "C00153", "database": "COMPOUND", "url": "" }, { "id": "17154", "database": "ChEBI", "url": "" }, { "id": "ZINC000000005878", "database": "ZINC", "url": "" } ] }, { "participant_id": "R-ALL-9861625", "participant_name": "2''-O-lipoyl-ADP-D-ribose [mitochondrial matrix]", "crossref": [ { "id": "189572", "database": "ChEBI", "url": "" } ] }, { "participant_id": "R-SSC-6792585", "participant_name": "DLAT [mitochondrial matrix]", "crossref": [ { "id": "A0A5G2QLQ1", "database": "UniProt", "url": "" }, { "id": "9J1W", "database": "PDB", "url": "" }, { "id": "ENSSSCP00000063005", "database": "ENSEMBL", "url": "" }, { "id": "87325", "database": "VGNC", "url": "" }, { "id": "ENSSSCT00000078875", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCG00000015030", "database": "ENSEMBL", "url": "" } ] }, { "participant_id": "R-SSC-69969", "participant_name": "DLAT [mitochondrial matrix]", "crossref": [ { "id": "A0A5G2QLQ1", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000015030", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCP00000063005", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000078875", "database": "ENSEMBL", "url": "" }, { "id": "9J1W", "database": "PDB", "url": "" }, { "id": "87325", "database": "VGNC", "url": "" } ] }, { "participant_id": "R-SSC-9861594", "participant_name": "DLAT [mitochondrial matrix]", "crossref": [ { "id": "ENSSSCP00000063005", "database": "ENSEMBL", "url": "" }, { "id": "A0A5G2QLQ1", "database": "UniProt", "url": "" }, { "id": "9J1W", "database": "PDB", "url": "" }, { "id": "87325", "database": "VGNC", "url": "" }, { "id": "ENSSSCT00000078875", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCG00000015030", "database": "ENSEMBL", "url": "" } ] }, { "participant_id": "R-SSC-9861664", "participant_name": "DLAT [mitochondrial matrix]", "crossref": [ { "id": "A0A5G2QLQ1", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000015030", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCP00000063005", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000078875", "database": "ENSEMBL", "url": "" }, { "id": "9J1W", "database": "PDB", "url": "" }, { "id": "87325", "database": "VGNC", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QLQ1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 647, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QLQ1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QLQ1" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QLQ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLQ1" }, { "id": "PS50968", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50968" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Lipoyl-binding", "eco_id": "ECO_0000259", "start_pos": 91, "end_pos": 167, "start_aa": "His", "end_aa": "Val", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A5G2QLQ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLQ1" }, { "id": "PS51826", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51826" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Peripheral subunit-binding (PSBD)", "eco_id": "ECO_0000259", "start_pos": 356, "end_pos": 393, "start_aa": "Phe", "end_aa": "Val", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 196, 205, 322, 327, 339, 347 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 178, "end_pos": 180 }, { "start_pos": 495, "end_pos": 497 }, { "start_pos": 575, "end_pos": 577 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 6 }, { "field": "total_sites", "count": 6 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 6 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 6 }, { "field": "exact_o_linked_sites", "count": 6 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, 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of Protein-serine/threonine kinase OS=Sus scrofa OX=9823 GN=BCKDK PE=1 SV=1 CANONICAL=A0A5G2QFT3-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QFT3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFT3/entry", "sequence": { "sequence": "WLRSPTKEQNDDAGIGAGEWSPGGATTPASLGARTLAPGPLHISHRYPPRGDGAGALQDRHLLLQPVSHRRSSREALSPPHSDHDALFRTLSGWQPPAGKIPVPIFLLAPGALTQPLRPWPNFPPFFLLEKCSVLAARLPVRIAHRIKDFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLVRSFLDKTLTSRLGIRMLATHHLALHEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLDYILPELLKNAMRATMECHLDTPYNVPDVVITIANNDIDLVIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRISPLFGHLDMHSGSQSGPMHGFGFGLPTSRAYAEYLGGSLRLQSLQGIGTDVYLRLRHIDGREESFRI", "length": 453, "header": "tr|A0A5G2QFT3-1|A0A5G2QFT3_PIG Isoform 1 of Protein-serine/threonine kinase OS=Sus scrofa OX=9823 GN=BCKDK PE=1 SV=1 CANONICAL=A0A5G2QFT3-1" }, "locus": { "chromosome": "3", "start_pos": 17380024, "end_pos": 17375945, "strand": "+", "evidence": [ { "database": "Ensembl 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"strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008510.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008510.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008291.4", "url": "https://www.ensembl.org/id/ENSSSCP00000008291.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1RIR7", "url": "https://www.uniprot.org/uniprotkb/F1RIR7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-70895", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-70895", "resource": "Reactome", "description": "Branched-chain amino acid catabolism" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "pyruvate dehydrogenase (acetyl-transferring) kinase activity", "id": "GO:0004740", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004740", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFT3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFT3" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFT3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFT3" } ], "pmid": "" }, { "name": "protein serine/threonine phosphatase activity", "id": "GO:0004722", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004722", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFT3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFT3" } ], "pmid": "" }, { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFT3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFT3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFT3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFT3" } ], "pmid": "" }, { "name": "mitochondrial matrix", "id": "GO:0005759", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005759", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFT3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFT3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "lipid biosynthetic process", "id": "GO:0008610", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008610", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFT3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFT3" } ], "pmid": "" }, { "name": "regulation of glucose metabolic process", "id": "GO:0010906", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010906", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFT3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFT3" } ], "pmid": "" }, { "name": "regulation of pyruvate decarboxylation to acetyl-CoA", "id": "GO:0010510", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010510", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFT3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFT3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-5693148", "name": "BCKDK phosphorylates BCKDH", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5693148", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5693148" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QFT3-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 453, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QFT3-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QFT3" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QFT3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFT3" }, { "id": "PS50109", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50109" } ], "ann_type": 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"MEQLGAAAAAGAGGGGEEPSGGRSNKRSAGNRAANEEETKNKPKLNIQIKTLADDVRDRITSFRKSTVKKEKPLIQHPIDSQVAMSEFPAAQPLYDERSLNLSEKEVLDLFEKMMEDMNLNEERKAPLRNKDFTTKREMVVQYISATAKSIVGSKVMGGLKNSKHECTLSSQEYVHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDVLEKLLDKKQQENIDKKNQYKLIQCLKAFMNNKFGLQRILGDERSLLLLARAIDPKQPNMMTEIVKILSAICIVGEENILDKLLGAITTAAERNNRERFSPIVEGLENHEALQLQVACMQFINALVTSPYELDFRIHLRNEFLRSGLKTMLPDLKEKENDELDIQLKVFDENKEDDLTELSHRLNDIRAEMDDMNEVYHLLYNMLKDTAAENYLLSILQHFLLIRNDYYIRPQYYKIIEECVTQIVLHCSGMDPDFKYRQRLDIDFTHLIDACVNKAKVEESEQKAAEFSKKFDEEFTARQEAQAELQKREEKIKELETEILQLRTQGHGLSGASGIPGPPPPPPLPGVGPPSAPPPPAPPLPGVGPPPPPPPLPGGPGIPPPLFGGPPPPPPLGGIPPPPGTVLDLPHGMKQKKIYKPEVSMKRINWSKIEPKELSESCFWLKVKEDKFENPDLFAKLALNFATQMKVQKNAEALEEKKSLPTKKRVKELRILDPKTAQNLSIFLGSYRMPYEDIKNIILEVNEDMLSEALIQNLIKHLPEQKVLSELAHLKNEYDDLCEPEQFGVVMSSVKMLRPRLNSILFKLMFEEHVNNIKPSIIAVTLACEELKKSESFHRLLELILLVGNYMNSGSRNAQSFGFKINFLCKIRDTKSADQKTTLLHFIAEICEEKYRDILKFPEELEHVESASKVSAQILKSNLAAMEQQIVHLERDIKQFPQTENQHDKFVEKMTIFTKSARDQYEKLYTMHNNMVKLYETLGEYFIFDAKTVSIEEFFGDLSNFRTLFLEAVKENNKRKEMEEKTRRAKLAKEKAEREKLERQKKKKQLIDINKEGDETGVMDNLLEALQSGAAFRDRRKRIPRNPVVSHTCTTRANPRSAT", "length": 1100, "header": "tr|A0A5G2QFW7-1|A0A5G2QFW7_PIG Isoform 1 of Protein diaphanous homolog 2 OS=Sus scrofa OX=9823 GN=DIAPH2 PE=3 SV=1 CANONICAL=A0A5G2QFW7-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QFW7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFW7/entry", "sequence": { "sequence": "MEQLGAAAAAGAGGGGEEPSGGRSNKRSAGNRAANEEETKNKPKLNIQIKTLADDVRDRITSFRKSTVKKEKPLIQHPIDSQVAMSEFPAAQPLYDERSLNLSEKEVLDLFEKMMEDMNLNEERKAPLRNKDFTTKREMVVQYISATAKSIVGSKVMGGLKNSKHECTLSSQEYVHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDVLEKLLDKKQQENIDKKNQYKLIQCLKAFMNNKFGLQRILGDERSLLLLARAIDPKQPNMMTEIVKILSAICIVGEENILDKLLGAITTAAERNNRERFSPIVEGLENHEALQLQVACMQFINALVTSPYELDFRIHLRNEFLRSGLKTMLPDLKEKENDELDIQLKVFDENKEDDLTELSHRLNDIRAEMDDMNEVYHLLYNMLKDTAAENYLLSILQHFLLIRNDYYIRPQYYKIIEECVTQIVLHCSGMDPDFKYRQRLDIDFTHLIDACVNKAKVEESEQKAAEFSKKFDEEFTARQEAQAELQKREEKIKELETEILQLRTQGHGLSGASGIPGPPPPPPLPGVGPPSAPPPPAPPLPGVGPPPPPPPLPGGPGIPPPLFGGPPPPPPLGGIPPPPGTVLDLPHGMKQKKIYKPEVSMKRINWSKIEPKELSESCFWLKVKEDKFENPDLFAKLALNFATQMKVQKNAEALEEKKSLPTKKRVKELRILDPKTAQNLSIFLGSYRMPYEDIKNIILEVNEDMLSEALIQNLIKHLPEQKVLSELAHLKNEYDDLCEPEQFGVVMSSVKMLRPRLNSILFKLMFEEHVNNIKPSIIAVTLACEELKKSESFHRLLELILLVGNYMNSGSRNAQSFGFKINFLCKIRDTKSADQKTTLLHFIAEICEEKYRDILKFPEELEHVESASKVSAQILKSNLAAMEQQIVHLERDIKQFPQTENQHDKFVEKMTIFTKSARDQYEKLYTMHNNMVKLYETLGEYFIFDAKTVSIEEFFGDLSNFRTLFLEAVKENNKRKEMEEKTRRAKLAKEKAEREKLERQKKKKQLIDINKEGDETGVMDNLLEALQSGAAFRDRRKRIPRNPVVSHTCTTRANPRSAT", "length": 1100, "header": "tr|A0A5G2QFW7-1|A0A5G2QFW7_PIG Isoform 1 of Protein diaphanous homolog 2 OS=Sus scrofa OX=9823 GN=DIAPH2 PE=3 SV=1 CANONICAL=A0A5G2QFW7-1" }, "locus": { "chromosome": "X", "start_pos": 79405324, "end_pos": 78602745, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081017.1", "url": "https://www.ensembl.org/id/ENSSSCT00000081017.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062671.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062671.1" } ] } }, { "isoform_ac": "A0A5G2R9R5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9R5/entry", "sequence": { "sequence": "MEQLGAAAAAGAGGGGEEPSGGRSNKRSAGNRAANEEETKNKPKLNIQIKTLADDVRDRITSFRKSTVKKEKPLIQHPIDSQVAMSEFPAAQPLYDERSLNLSEKEVLDLFEKMMEDMNLNEERKAPLRNKDFTTKREMVVQYISATAKSGGLKNSKHECTLSSQEYVHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDVLEKLLDKKQQENIDKKNQYKLIQCLKAFMNNKFGLQRILGDERSLLLLARAIDPKQPNMMTEIVKILSAICIVGEENILDKLLGAITTAAERNNRERFSPIVEGLENHEALQLQVACMQFINALVTSPYELDFRIHLRNEFLRSGLKTMLPDLKEKENDELDIQLKVFDENKEDDLTELSHRLNDIRAEMDDMNEVYHLLYNMLKDTAAENYLLSILQHFLLIRNDYYIRPQYYKIIEECVTQIVLHCSGMDPDFKYRQRLDIDFTHLIDACVNKAKVEESEQKAAEFSKKFDEEFTARQEAQAELQKREEKIKELETEILQLRTQGHGLSGASGIPGPPPPPPLPGVGPPSAPPPPAPPLPGVGPPPPPPPLPGGPGIPPPLFGGPPPPPPLGGIPPPPGTVLDLPHGMKQKKIYKPEVSMKRINWSKIEPKELSESCFWLKVKEDKFENPDLFAKLALNFATQMKVQKNAEALEEKKSLPTKKRVKELRILDPKTAQNLSIFLGSYRMPYEDIKNIILEVNEDMLSEALIQNLIKHLPEQKVLSELAHLKNEYDDLCEPEQFGVVMSSVKMLRPRLNSILFKLMFEEHVNNIKPSIIAVTLACEELKKSESFHRLLELILLVGNYMNSGSRNAQSFGFKINFLCKIRDTKSADQKTTLLHFIAEICEEKYRDILKFPEELEHVESASKVSAQILKSNLAAMEQQIVHLERDIKQFPQTENQHDKFVEKMTIFTKSARDQYEKLYTMHNNMVKLYETLGEYFIFDAKTVSIEEFFGDLSNFRTLFLEAVKENNKRKEMEEKTRRAKLAKEKAEREKLERQKKKKQLIDINKEGDETGVMDNLLEALQSGAAFRDRRKRIPRNPDNRRVPLERSRSRHN", "length": 1092, "header": "tr|A0A5G2R9R5-1|A0A5G2QFW7_PIG Computationally mapped isoform of Protein diaphanous homolog 2 OS=Sus scrofa OX=9823 GN=DIAPH2 PE=3 SV=1 CANONICAL=A0A5G2QFW7-1" }, "locus": { "chromosome": "X", "start_pos": 79515101, "end_pos": 78602745, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079838.1", "url": "https://www.ensembl.org/id/ENSSSCT00000079838.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074044.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074044.1" } ] } }, { "isoform_ac": "A0A5G2RC96-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RC96/entry", "sequence": { "sequence": "MEQLGAAAAAGAGGGGEEPSGGRSNKRSAGNRAANEEETKNKPKLRDRITSFRKSTVKKEKPLIQHPIDSQVAMSEFPAAQPLYDERSLNLSEKEVLDLFEKMMEDMNLNEERKAPLRNKDFTTKREMVVQYISATAKSGGLKNSKHECTLSSQEYVHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDVLEKLLDKKQQENIDKKNQYKLIQCLKAFMNNKFGLQRILGDERSLLLLARAIDPKQPNMMTEIVKILSAICIVGEENILDKLLGAITTAAERNNRERFSPIVEGLENHEALQLQVACMQFINALVTSPYELDFRIHLRNEFLRSGLKTMLPDLKEKENDELDIQLKVFDENKEDDLTELSHRLNDIRAEMDDMNEVYHLLYNMLKDTAAENYLLSILQHFLLIRNDYYIRPQYYKIIEECVTQIVLHCSGMDPDFKYRQRLDIDFTHLIDACVNKAKVEESEQKAAEFSKKFDEEFTARQEAQAELQKREEKIKELETEILQLRTQGHGLSGASGIPGPPPPPPLPGVGPPSAPPPPAPPLPGVGPPPPPPPLPGGPGIPPPLFGGPPPPPPLGGIPPPPGTVLDLPHGMKQKKIYKPEVSMKRINWSKIEPKELSESCFWLKVKEDKFENPDLFAKLALNFATQMKVQKNAEALEEKKSLPTKKRVKELRILDPKTAQNLSIFLGSYRMPYEDIKNIILEVNEDMLSEALIQNLIKHLPEQKVLSELAHLKNEYDDLCEPEQFGVVMSSVKMLRPRLNSILFKLMFEEHVNNIKPSIIAVTLACEELKKSESFHRLLELILLVGNYMNSGSRNAQSFGFKINFLCKIRDTKSADQKTTLLHFIAEICEEKYRDILKFPEELEHVESASKVSAQILKSNLAAMEQQIVHLERDIKQFPQTENQHDKFVEKMTIFTKSARDQYEKLYTMHNNMVKLYETLGEYFIFDAKTVSIEEFFGDLSNFRTLFLEAVKENNKRKEMEEKTRRAKLAKEKAEREKLERQKKKKQLIDINKEGDETGVMDNLLEALQSGAAFRDRRKRIPRNPDNRRVPLERSRSRHN", "length": 1081, "header": "tr|A0A5G2RC96-1|A0A5G2QFW7_PIG Computationally mapped isoform of Protein diaphanous homolog 2 OS=Sus scrofa OX=9823 GN=DIAPH2 PE=3 SV=1 CANONICAL=A0A5G2QFW7-1" }, "locus": { "chromosome": "X", "start_pos": 79515101, "end_pos": 78602745, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067295.1", "url": "https://www.ensembl.org/id/ENSSSCT00000067295.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068249.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068249.1" } ] } }, { "isoform_ac": "A0A5G2RND5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RND5/entry", "sequence": { "sequence": "MEQLGAAAAAGAGGGGEEPSGGRSNKRSAGNRAANEEETKNKPKLNIQIKTLADDVRDRITSFRKSTVKKEKPLIQHPIDSQVAMSEFPAAQPLYDERSLNLSEKEVLDLFEKMMEDMNLNEERKAPLRNKDFTTKREMVVQYISATAKSGGLKNSKHECTLSSQEYVHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDVLEKLLDKKQQENIDKKNQYKLIQCLKAFMNNKFGLQRILGDERSLLLLARAIDPKQPNMMTEIVKILSAICIVGEENILDKLLGAITTAAERNNRERFSPIVEGLENHEALQLQVACMQFINALVTSPYELDFRIHLRNEFLRSGLKTMLPDLKEKENDELDIQLKVFDENKEDDLTELSHRLNDIRAEMDDMNEVYHLLYNMLKDTAAENYLLSILQHFLLIRNDYYIRPQYYKIIEECVTQIVLHCSGMDPDFKYRQRLDIDFTHLIDACVNKAKVEESEQKAAEFSKKFDEEFTARQEAQAELQKREEKIKELETEILQLRTQGHGLSGASGIPGPPPPPPLPGVGPPSAPPPPAPPLPGVGPPPPPPPLPGGPGIPPPLFGGPPPPPPLGGIPPPPGTVLDLPHGMKQKKIYKPEVSMKRINWSKIEPKELSESCFWLKVKEDKFENPDLFAKLALNFATQMKVQKNAEALEEKKSLPTKKRVKELRILDPKTAQNLSIFLGSYRMPYEDIKNIILEVNEDMLSEALIQNLIKHLPEQKVLSELAHLKNEYDDLCEPEQFGVVMSSVKMLRPRLNSILFKLMFEEHVNNIKPSIIAVTLACEELKKSESFHRLLELILLVGNYMNSGSRNAQSFGFKINFLCKIRDTKSADQKTTLLHFIAEICEEKYRDILKFPEELEHVESASKVSAQILKSNLAAMEQQIVHLERDIKQFPQTENQHDKFVEKMTIFTKSARDQYEKLYTMHNNMVKLYETLGEYFIFDAKTVSIEEFFGDLSNFRTLFLEAVKENNKRKEMEEKTRRAKLAKEKAEREKLERQKKKKQLIDINKEGDETGVMDNLLEALQSGAAFRDRRKRIPRNPDNRRVPLERSRSRHNAISSK", "length": 1097, "header": "tr|A0A5G2RND5-1|A0A5G2QFW7_PIG Computationally mapped isoform of Protein diaphanous homolog 2 OS=Sus scrofa OX=9823 GN=DIAPH2 PE=3 SV=1 CANONICAL=A0A5G2QFW7-1" }, "locus": { "chromosome": "X", "start_pos": 79515119, "end_pos": 78602745, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072337.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072337.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074340.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074340.1" } ] } }, { "isoform_ac": "F1S1M8-1", "url": "https://www.uniprot.org/uniprotkb/F1S1M8/entry", "sequence": { "sequence": "MERSAGNRAANEEETKNKPKLNIQIKTLADDVRDRITSFRKSTVKKEKPLIQHPIDSQVAMSEFPAAQPLYDERSLNLSEKEVLDLFEKMMEDMNLNEERKAPLRNKDFTTKREMVVQYISATAKSGGLKNSKHECTLSSQEYVHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDVLEKLLDKKQQENIDKKNQYKLIQCLKAFMNNKFGLQRILGDERSLLLLARAIDPKQPNMMTEIVKILSAICIVGEENILDKLLGAITTAAERNNRERFSPIVEGLENHEALQLQVACMQFINALVTSPYELDFRIHLRNEFLRSGLKTMLPDLKEKENDELDIQLKVFDENKEDDLTELSHRLNDIRAEMDDMNEVYHLLYNMLKDTAAENYLLSILQHFLLIRNDYYIRPQYYKIIEECVTQIVLHCSGMDPDFKYRQRLDIDFTHLIDACVNKAKVEESEQKAAEFSKKFDEEFTARQEAQAELQKREEKIKELETEILQLRTQGHGLSGASGIPGPPPPPPLPGVGPPSAPPPPAPPLPGVGPPPPPPPLPGGPGIPPPLFGGPPPPPPLGGIPPPPGTVLDLPHGMKQKKIYKPEVSMKRINWSKIEPKELSESCFWLKVKEDKFENPDLFAKLALNFATQMKVQKNAEALEEKKSLPTKKRVKELRILDPKTAQNLSIFLGSYRMPYEDIKNIILEVNEDMLSEALIQNLIKHLPEQKVLSELAHLKNEYDDLCEPEQFGVVMSSVKMLRPRLNSILFKLMFEEHVNNIKPSIIAVTLACEELKKSESFHRLLELILLVGNYMNSGSRNAQSFGFKINFLCKIRDTKSADQKTTLLHFIAEICEEKYRDILKFPEELEHVESASKVSAQILKSNLAAMEQQIVHLERDIKQFPQTENQHDKFVEKMTIFTKSARDQYEKLYTMHNNMVKLYETLGEYFIFDAKTVSIEEFFGDLSNFRTLFLEAVKENNKRKEMEEKTRRAKLAKEKAEREKLERQKKKKQLIDINKEGDETGVMDNLLEALQSGAAFRDRRKRIPRNPDNRRVPLERSRSRHN", "length": 1068, "header": "tr|F1S1M8-1|A0A5G2QFW7_PIG Computationally mapped isoform of Protein diaphanous homolog 2 OS=Sus scrofa OX=9823 GN=DIAPH2 PE=3 SV=5 CANONICAL=A0A5G2QFW7-1" }, "locus": { "chromosome": "X", "start_pos": 79515101, "end_pos": 78602745, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000013641.5", "url": "https://www.ensembl.org/id/ENSSSCT00000013641.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000013271.5", "url": "https://www.ensembl.org/id/ENSSSCP00000013271.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S1M8", "url": "https://www.uniprot.org/uniprotkb/F1S1M8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-5663220", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5663220", "resource": "Reactome", "description": "RHO GTPases Activate Formins" }, { "id": "R-SSC-9035034", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9035034", "resource": "Reactome", "description": "RHOF GTPase cycle" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "actin binding", "id": "GO:0003779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003779", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFW7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFW7" } ], "pmid": "" }, { "name": "small GTPase binding", "id": "GO:0031267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031267", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFW7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFW7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "actin filament", "id": "GO:0005884", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005884", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFW7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFW7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "actin filament polymerization", "id": "GO:0030041", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030041", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFW7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFW7" } ], "pmid": "" }, { "name": "oogenesis", "id": "GO:0048477", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048477", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFW7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFW7" } ], "pmid": "" }, { "name": "actin cytoskeleton organization", "id": "GO:0030036", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030036", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFW7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFW7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 101, "end_pos": 103, "annotation": "n_glycosylation_sequon" }, { "start_pos": 646, "end_pos": 648, "annotation": "n_glycosylation_sequon" }, { "start_pos": 720, "end_pos": 722, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QFW7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1100, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QFW7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QFW7" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QFW7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFW7" }, { "id": "PS51231", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51231" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DAD", "eco_id": "ECO_0000259", "start_pos": 1055, "end_pos": 1085, "start_aa": "Asp", "end_aa": "Val", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A5G2QFW7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFW7" }, { "id": "PS51444", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51444" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "FH2", "eco_id": "ECO_0000259", "start_pos": 632, "end_pos": 1032, "start_aa": "Gln", "end_aa": "Lys", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A5G2QFW7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFW7" }, { "id": "PS51232", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51232" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "GBD/FH3", "eco_id": "ECO_0000259", "start_pos": 99, "end_pos": 472, "start_aa": "Ser", "end_aa": "Asp", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 101, "end_pos": 103 }, { "start_pos": 646, "end_pos": 648 }, { "start_pos": 720, "end_pos": 722 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QIU5-1", "uniprot_ac": "A0A5G2QIU5", "uniprot_id": "A0A5G2QIU5_PIG", "mass": { "chemical_mass": 79519.0, "monoisotopic_mass": 79519.0 }, "refseq": { "ac": "XP_020928699", "name": "intraflagellar transport protein 81 homolog isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020928699" }, "gene_names": [ { "name": "IFT81", "type": "recommended", "evidence": [ { "id": "A0A5G2QIU5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIU5" } ] }, { "name": "IFT81", "type": "synonym", "evidence": [ { "id": "XP_020928699", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020928699" } ] } ], "protein_names": [ { "name": "Intraflagellar transport protein 81 homolog", "type": "recommended", "evidence": [ { "id": "A0A5G2QIU5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIU5/entry#names_and_taxonomy" } ] }, { "name": "Carnitine deficiency-associated protein expressed in ventricle 1", "type": "synonym", "evidence": [ { "id": "A0A5G2QIU5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIU5/entry#names_and_taxonomy" } ] }, { "name": "intraflagellar transport protein 81 homolog isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020928699", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020928699" } ] } ], "function": [ { "annotation": "Component of the intraflagellar transport (IFT) complex B: together with IFT74, forms a tubulin-binding module that specifically mediates transport of tubulin within the cilium. Binds tubulin via its CH (calponin-homology)-like region. Required for ciliogenesis. Required for proper regulation of SHH signaling. Plays an important role during spermatogenesis by modulating the assembly and elongation of the sperm flagella.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QX62", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QX62#function" }, { "database": "UniProtKB", "id": "ARBA00055755", "url": "https://www.uniprot.org/uniprotkb/ARBA00055755#function" }, { "database": "UniProtKB", "id": "A0A5G2R5B3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5B3#function" }, { "database": "UniProtKB", "id": "A0A5G2QIU5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIU5#function" }, { "database": "UniProtKB", "id": "F1RNN4", "url": "https://www.uniprot.org/uniprotkb/F1RNN4#function" }, { "database": "UniProtKB", "id": "A0A5G2QFY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFY8#function" }, { "database": "UniProtKB", "id": "A0A5G2QLX5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLX5#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIU5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIU5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "IFT81", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIU5", "locus": { "chromosome": "14", "start_pos": 31615000, "end_pos": 31425658, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000009818", "url": "https://www.ensembl.org/id/ENSSSCG00000009818" } ] } } ], "crossref": [ { "id": "A0A5G2QIU5", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QIU5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000009818", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000009818", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100156117", "url": "https://www.ncbi.nlm.nih.gov/gene/100156117", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR029600", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029600", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041146", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041146", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043016", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043016", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100156117", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156117", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WILTHME", "url": "https://omabrowser.org/oma/group/WILTHME/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QIU5", "url": "https://www.orthodb.org/?gene=A0A5G2QIU5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15614", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15614", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15614:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15614:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF18383", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18383", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-5620924", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5620924", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020928699", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020928699", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QFY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFY8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFY8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFY8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QIU5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIU5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QIU5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIU5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QLX5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLX5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QLX5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLX5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QX62", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QX62", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QX62-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QX62-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R5B3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5B3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R5B3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5B3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RNN4", "url": "https://www.uniprot.org/uniprotkb/F1RNN4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RNN4-1", "url": "https://www.uniprot.org/uniprotkb/F1RNN4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSDQIKFIVDNLNKEPFRKNYNLITFDSLEPMQLLQVLNDVLAEIDPKQDVDIREEMPEQTAKRMLSLLGILKYKPPGSATDMSTFRQGLVIGSKPVIYPVLHWLLQRTNELKKRAYLARFLIKLEVPSEFLQDETVADTNKQYEDLMEGFKTLHKECEQLKTSGFSTAEIRRDISAMEEEKDQLIKRVERLKKRVETVQNHQRMLKIARQLRVEKEREEFLAQQKQEQKNQLFHAVQRLQRIQNQLKSMRHAAADAKPESLMKRLEEEIKFNSYMVTEKFPKELENKKKELHFLQKVVSEPAMGQSDLLELESKINEINTQINQLIEKKMIRNEPIEGRLSLYRQQASIISHKKEAKAEELQEAKEKLANLEREVSVKTNQTREFDGTEVLKGDEFKRYVSKLRSKSTIFKKKHQIIAEFKAEFGLLQRTEELLKQRHENIQHQLQTLEEKKGISGYSYTQEELERVSALKSEVDEVKGRTLDDMSEMVKKLNSLVTEKKSALAPVIKELRQLRQKCQELTQECDEKKSQYDSCAAGLESNRSKLEQEVRGLREECLQEESRYHYTNFMIKNLEVQLRRATDEMKAYVSSDQQEKRKAIREQYTKNITEQENLGKKLREKQKAVRESHGPNMKQAKMWRDFEQLMECKKQCFLKQQSQTSIGQVIQEGGEDRLIL", "length": 676, "header": "tr|A0A5G2QIU5-1|A0A5G2QIU5_PIG Isoform 1 of Intraflagellar transport protein 81 homolog OS=Sus scrofa OX=9823 GN=IFT81 PE=3 SV=1 CANONICAL=A0A5G2QIU5-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QFY8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFY8/entry", "sequence": { "sequence": "MSDQIKFIVDNLNKEPFRKNYNLITFDSLEPMQLLQVLNDVLAEIDPKQDVDIREEMPEQTAKRMLSLLGILKYKPPGSATDMSTFRQGLVIGSKPVIYPVLHWLLQRTNELKKRAYLARFLIKLEVPSEFLQDETDISAMEEEKDQLIKRVERLKKRVETVQNHQRMLKIARQLRVEKEREEFLAQQKQEQKNQLFHAVQRLQRIQNQLKSMRHAAADAKPESLMKRLEEEIKFNSYMVTEKFPKELENKKKELHFLQKVVSEPAMGQSDLLELESKINEINTQINQLIEKKMIRNEPIEGRLSLYRQQASIISHKKEAKAEELQEAKEKLANLEREVSVKTNQTREFDGTEVLKGDEFKRYVSKLRSKSTIFKKKHQIIAEFKAEFGLLQRTEELLKQRHENIQHQLQTLEEKKGISGYSYTQEELERVSALKSEVDEVKGRTLDDMSEMVKKLNSLVTEKKSALAPVIKELRQLRQKCQELTQECDEKKSQYDSCAAGLESNRSKLEQEVRGLREECLQEESRYHYTNFMIKNLEVQLRRATDEMKAYVSSDQQEKRKAIREQYTKNITEQENLGKKLREKQKAVRESHGPNMKQAKMWRDFEQLMECKKQCFLKQQSQTSIGQVIQEGGEDRLIL", "length": 639, "header": "tr|A0A5G2QFY8-1|A0A5G2QIU5_PIG Computationally mapped isoform of Intraflagellar transport protein 81 homolog OS=Sus scrofa OX=9823 GN=IFT81 PE=3 SV=1 CANONICAL=A0A5G2QIU5-1" }, "locus": { "chromosome": "14", "start_pos": 31614453, "end_pos": 31522552, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083922.1", "url": "https://www.ensembl.org/id/ENSSSCT00000083922.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063652.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063652.1" } ] } }, { "isoform_ac": "A0A5G2QIU5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIU5/entry", "sequence": { "sequence": "MSDQIKFIVDNLNKEPFRKNYNLITFDSLEPMQLLQVLNDVLAEIDPKQDVDIREEMPEQTAKRMLSLLGILKYKPPGSATDMSTFRQGLVIGSKPVIYPVLHWLLQRTNELKKRAYLARFLIKLEVPSEFLQDETVADTNKQYEDLMEGFKTLHKECEQLKTSGFSTAEIRRDISAMEEEKDQLIKRVERLKKRVETVQNHQRMLKIARQLRVEKEREEFLAQQKQEQKNQLFHAVQRLQRIQNQLKSMRHAAADAKPESLMKRLEEEIKFNSYMVTEKFPKELENKKKELHFLQKVVSEPAMGQSDLLELESKINEINTQINQLIEKKMIRNEPIEGRLSLYRQQASIISHKKEAKAEELQEAKEKLANLEREVSVKTNQTREFDGTEVLKGDEFKRYVSKLRSKSTIFKKKHQIIAEFKAEFGLLQRTEELLKQRHENIQHQLQTLEEKKGISGYSYTQEELERVSALKSEVDEVKGRTLDDMSEMVKKLNSLVTEKKSALAPVIKELRQLRQKCQELTQECDEKKSQYDSCAAGLESNRSKLEQEVRGLREECLQEESRYHYTNFMIKNLEVQLRRATDEMKAYVSSDQQEKRKAIREQYTKNITEQENLGKKLREKQKAVRESHGPNMKQAKMWRDFEQLMECKKQCFLKQQSQTSIGQVIQEGGEDRLIL", "length": 676, "header": "tr|A0A5G2QIU5-1|A0A5G2QIU5_PIG Isoform 1 of Intraflagellar transport protein 81 homolog OS=Sus scrofa OX=9823 GN=IFT81 PE=3 SV=1 CANONICAL=A0A5G2QIU5-1" }, "locus": { "chromosome": "14", "start_pos": 31614453, "end_pos": 31522552, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088217.2", "url": "https://www.ensembl.org/id/ENSSSCT00000088217.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064721.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064721.1" } ] } }, { "isoform_ac": "A0A5G2QLX5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLX5/entry", "sequence": { "sequence": "MSDQIKFIVDNLNKEPFRKNYNLITFDSLEPMQLLQVLNDVLAEIDPKQDVDIREEMPEQTAKRMLSLLGILKYKPPGSATDMSTFRQGLVIGSKPVIYPVLHWLLQRTNELKKRAYLARFLIKLEVPSEFLQDETVADTNKQYEDLMEGFKTLHKECEQLKTSGFSTAEIRRDISAMEEEKDQLIKRVERLKKRVETVQNHQRMLKIARQLRVEKEREEFLAQQKQEQKNQLFHAVQRLQRIQNQLKSMRHAAADAKPESLMKRLEEEIKFNSYMVTEKFPKELENKKKELHFLQKVVSEPAMGQSDLLELESKINEINTQINQLIEKKMIRNEPIEGRLSLYRQQFKRYVSKLRSKSTIFKKKHQIIAEFKAEFGLLQRTEELLKQRHENIQHQLQTLEEKKGISGYSYTQEELERVSALKSEVDEVKGRTLDDMSEMVKKLNSLVTEKKSALAPVIKELRQLRQKCQELTQECDEKKSQYDSCAAGLESNRSKLEQEVRGLREECLQEESRYHYTNFMIKNLEVQLRRATDEMKAYVSSDQQEKRKAIREQYTKNITEQENLGKKLREKQKAVRESHGPNMKQAKMWRDFEQLMECKKQCFLKQQSQTSIGQVIQEGGEDRLIL", "length": 627, "header": "tr|A0A5G2QLX5-1|A0A5G2QIU5_PIG Computationally mapped isoform of Intraflagellar transport protein 81 homolog OS=Sus scrofa OX=9823 GN=IFT81 PE=3 SV=1 CANONICAL=A0A5G2QIU5-1" }, "locus": { "chromosome": "14", "start_pos": 31614453, "end_pos": 31522552, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070865.2", "url": "https://www.ensembl.org/id/ENSSSCT00000070865.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065588.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065588.1" } ] } }, { "isoform_ac": "A0A5G2QX62-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QX62/entry", "sequence": { "sequence": "MSDQIKFIVDNLNKEPFRKNYNLITFDSLEPMQLLQVLNDVLAEIDPKQDVDIREEMPEQTAKRMLSLLGILKYKPPGSATDMSTFRQGLVIGSKPVIYPVLHWLLQRTNELKKRAYLARFLIKLEVPSEFLQDETVADTNKQYEDLMEGFKTLHKECEQLKTSGFSTAEIRRDISAMEEEKDQLIKRVERLKKRVETVQNHQRMLKIARQLRVEKEREEFLAQQKQEQKNQLFHAVQRLQRIQNQLKSMRHAAADAKPESLMKRLEEEIKFNSYMVTEKFPKELENKKKELHFLQKVVSEPAMGQSDLLELESKINEINTQINQLIEKKMIRNEPIEGRLSLYRQQASIISHKKEAKAEELQEAKEKLANLEREVSVKTNQTREFDGTEVLKGDEVS", "length": 398, "header": "tr|A0A5G2QX62-1|A0A5G2QIU5_PIG Computationally mapped isoform of Intraflagellar transport protein 81 homolog OS=Sus scrofa OX=9823 GN=IFT81 PE=3 SV=1 CANONICAL=A0A5G2QIU5-1" }, "locus": { "chromosome": "14", "start_pos": 31548308, "end_pos": 31522552, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077878.1", "url": "https://www.ensembl.org/id/ENSSSCT00000077878.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069529.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069529.1" } ] } }, { "isoform_ac": "A0A5G2R5B3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5B3/entry", "sequence": { "sequence": "MSDQIKFIVDNLNKEPFRKNYNLITFDSLEPMQLLQVLNDVLAEIDPKQDVDIREEMPEQTAKRMLSLLGILKYKPPGSATDMSTFRQGLVIGSKPVIYPVLHWLLQRTNELKKRAYLARFLIKLEVPSEFLQDETVADTNKQYEDLMEGFKTLHKECEQLKTSGFSTAEIRRDISAMEEEKDQLIKRVERLKKRVETVQNHQRMLKIARQLRVEKEREEFLAQQKQEQKNQLFHAVQRLQRIQNQLKSMRHAAADAKPESLMKRLEEEIKFNSYMVTEKFPKELENKKKELHFLQKVVSEPAMGQSDLLELESKINEINTQINQLIEKKMIRNEPIEGRLSLYRQQASIISHKKEAKAEELQEAKEKLANLEREVSVKTNQTREFDGTEVLKGDERTEELLKQRHENIQHQLQTLEEKKGISGYSYTQEELERVSALKSEVDEVKGRTLDDMSEMVKKLNSLVTEKKSALAPVIKELRQLRQKCQELTQECDEKKSQYDSCAAGLESNRSKLEQEVRGLREECLQEESRYHYTNFMIKNLEVQLRRATDEMKAYVSSDQQEKRKAIREQYTKNITEQENLGKKLREKQKAVRESHGPNMKQAKMWRDFEQLMECKKQCFLKQQSQTSIGQVIQEGGEDRLIL", "length": 643, "header": "tr|A0A5G2R5B3-1|A0A5G2QIU5_PIG Computationally mapped isoform of Intraflagellar transport protein 81 homolog OS=Sus scrofa OX=9823 GN=IFT81 PE=3 SV=2 CANONICAL=A0A5G2QIU5-1" }, "locus": { "chromosome": "14", "start_pos": 31614453, "end_pos": 31522552, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071689.2", "url": "https://www.ensembl.org/id/ENSSSCT00000071689.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072419.2", "url": "https://www.ensembl.org/id/ENSSSCP00000072419.2" } ] } }, { "isoform_ac": "F1RNN4-1", "url": "https://www.uniprot.org/uniprotkb/F1RNN4/entry", "sequence": { "sequence": "MSDQIKFIVDNLNKEPFRKNYNLITFDSLEPMQLLQVLNDVLAEIDPKQDVDIREEMPEQTAKRMLSLLGILKYKPPGSATDMSTFRQGLVIGSKPVIYPVLHWLLQRTNELKKRAYLARFLIKLEVPSEFLQDETVADTNKQYEDLMEGFKTLHKECEQLKTSGFSTAEIRRDISAMEEEKDQLIKRVERLKKRVETVQNHQRMLKIARQLRVEKEREEFLAQQKQEQKNQLFHAVQRLQRIQNQLKSMRHAAADAKPESLMKRLEEEIKFNSYMVTEKFPKELENKKKELHFLQKVVSEPAMGQSDLLELESKINEINTQINQLIEKKMIRNEPIEGRLSLYRQQASIISHKKEAKAEELQEAKEKLANLEREVSVKTNQTREFDGTEVLKGDEFKRYVSKLRSKSTIFKKKHQIIAEFKAEFGLLQRTEELLKQRHENIQHQLQTLEEKKGISGYSYTQEELERVSALKSEVDEVKGRTLDDMSEMVKKLNSLVTEKKSALAPVIKELRQLRQKCQEVRGLREECLQEESRYHYTNFMIKNLEVQLRRATDEMKAYVSSDQQEKRKAIREQYTKNITEQENLGKKLREKQKAVRESHGPNMKQAKMWRDFEQLMECKKQCFLKQQSQTSIGQVIQEGGEDRLIL", "length": 647, "header": "tr|F1RNN4-1|A0A5G2QIU5_PIG Computationally mapped isoform of Intraflagellar transport protein 81 homolog OS=Sus scrofa OX=9823 GN=IFT81 PE=3 SV=4 CANONICAL=A0A5G2QIU5-1" }, "locus": { "chromosome": "14", "start_pos": 31614453, "end_pos": 31522552, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000010761.6", "url": "https://www.ensembl.org/id/ENSSSCT00000010761.6" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000010481.4", "url": "https://www.ensembl.org/id/ENSSSCP00000010481.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFY8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100156117", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156117", "resource": "KEGG Pathway" }, { "id": "R-SSC-5620924", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5620924", "resource": "Reactome", "description": "Intraflagellar transport" } ], "orthologs": [ { "uniprot_canonical_ac": "O35594-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "Ift81", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDQIKFIVDSLNKEPFKKNYNLITFDSLGPMQLLQVLNDVLAEIDPKQDVDIREEMPEQTAKRMLNLLGILKYKPPGNATDMSTFRQGLVIGSKPVIYPVLHWLLQRSNELKKRAYLARFLIKLEVPSEFLQDETVADTNKQYEELMEAFKTLHKECEQLKTSGFSTAEIRRDISAMEEEKDQLMKRVERLKKRVETVQNHQRMLKIARQLRVEKEREEFLAQQKQEQKNQLFHAVQRLQRVQNQLKSMRHAAADAKPESLMKRLEEEIKFNSYMVTEKFPKELESKKKELHFLQKVVSEPAMGHSDLLELETKVNEVNTEINQLIEKKMMRNEPIEGKLSLYRQQASIISRKKEAKAEELQETKEKLASLEREVLVKTNQTREFDGTEVLKGDEFKRYVSKLRSKSTVFKKKHQIIAEFKAEFGLLQRTEELLKQRQETIQHQLRTIEEKKGISGYSYTQEELERVSALKSEVDEMKGRTLDDMSEMVKKLNSLVSEKKSALAPVIKELRQLRQKCQELTQECDEKKAQYDSCAAGLESNRSKLEQEVRGLREECLQEESKYHYTNCMIKNLEVELRRATDEMKAYVSSDQQEKRKAIREQYTKNITEQENLGKKLREKQKAVRESHGPNMKQAKMWRDLEQLMECKKQCFLKQQSPASIGQVIQEGGEDRLVL", "length": 676 }, "evidence": [ { "id": "A0A5G2QIU5", "url": "https://omabrowser.org/oma/group/A0A5G2QIU5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P83829-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "Ift81", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSDQIKFIVDSLNKEPFKKNYNLITFDSLGPMQLLQVLNDVLAEIDPKQDVDIREETPEQTAKRMLSLLGILKYKPPGNATDMSTFRQGLVIGSKPVIYPVLHWLLQRSSELKKRAYLARFLIKLEVPSEFLQDETVADTNKQYEELMEAFKALHKECEQLKTSGFSTAEIRRDISAMEEEKDQLMKRVERLKKRVETVQNHQRMLKIARQLRVEKEREEFLAQQKQEQKNQLFHAVQRLQRVQNQLKSMRHAAADAKPESLMKRLEEEIKFNSYMVTEKFPKELESKKKELHFLQKVVSEPAMGHSDLLELESKVNEVNAEINQLIEKKMMRNEPIEGKLSLYRQQASIISRKKEAKAEELQETKEKLASLEREVSVKTNQTREFDGTEVLKGDEFKRYVSKLRSKSTVFKKKHQIIAEFKAEFGLLQRTEELLKQRQETIQHQLRTIEEKKGISGYSYTQEELERVSALKSEVDEMKGRTLDDMSEMVKKLNSLVSEKKSALAPVIKELRQLRQKCQLTQECDEKRTQYDSCAAGLESNRSKLEQEVRGLREECLQEESKYHYTNCMIKNLEVQLRRATDEMKAYVSSDQQEKRKAIREQYTKNITEQENLGKKLREKQKAVRESHGPNMKQAKMWRDLEQLMECKKQCFLKQQSPASIGQVIQEGGEDRLVL", "length": 675 }, "evidence": [ { "id": "A0A5G2QIU5", "url": "https://omabrowser.org/oma/group/A0A5G2QIU5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport 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"categories": [ { "name": "Cellular Component", "total": 10, "go_terms": [ { "name": "cilium", "id": "GO:0005929", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005929", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIU5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIU5" } ], "pmid": "" }, { "name": "microtubule organizing center", "id": "GO:0005815", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005815", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIU5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIU5" } ], "pmid": "" }, { "name": "intraciliary transport particle B", "id": "GO:0030992", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030992", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIU5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIU5" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIU5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIU5" } ], "pmid": "" }, { "name": "centrosome", "id": "GO:0005813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005813", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIU5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIU5" } ], "pmid": "" }, { "name": "centriole", "id": "GO:0005814", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005814", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIU5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIU5" } ], "pmid": "" }, { "name": "ciliary basal body", "id": "GO:0036064", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036064", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIU5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIU5" } ], "pmid": "" }, { "name": "sperm principal piece", "id": "GO:0097228", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097228", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIU5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIU5" } ], "pmid": "" }, { "name": "sperm midpiece", "id": "GO:0097225", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097225", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIU5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIU5" } ], "pmid": "" }, { "name": "intraciliary transport particle A", "id": "GO:0030991", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030991", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIU5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIU5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 7, "go_terms": [ { "name": "spermatogenesis", "id": "GO:0007283", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007283", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIU5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIU5" } ], "pmid": "" }, { "name": "cell differentiation", "id": "GO:0030154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030154", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIU5", "url": 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"id": "A0A5G2QIU5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIU5" } ], "pmid": "" }, { "name": "sperm flagellum assembly", "id": "GO:0120316", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0120316", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIU5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIU5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "tubulin binding", "id": "GO:0015631", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015631", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIU5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIU5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 381, "end_pos": 383, "annotation": "n_glycosylation_sequon" }, { "start_pos": 542, "end_pos": 544, "annotation": "n_glycosylation_sequon" }, { "start_pos": 607, "end_pos": 609, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], 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"MRSLPRLLLLLLLVFPATLLLRGGPGGSLAVAQDLTEDEETVEDSIIEDEDDEAEVEEDEPTDLAEDKEEEDVSGEPEASPSADTTILFVKGEDFPANNIVKFLVGFTNKGTEDFIVELDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTIIEREDGLDGETIFMYMFLAGLGLLLVVGLHQLLESRKRKRPIQKVETGTSSQNDVDMSWIPQETLNQINKASPRRLPRKRAQKRSVGSDE", "length": 285, "header": "tr|A0A5G2QP96-1|A0A5G2QP96_PIG Isoform 1 of Translocon-associated protein subunit alpha OS=Sus scrofa OX=9823 GN=SSR1 PE=1 SV=1 CANONICAL=A0A5G2QP96-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QG70-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG70/entry", "sequence": { "sequence": "MRSLPRLLLLLLLVFPATLLLRGGPGGSLAVAQDLTEDEETVEDSIIEDEDDEAEVEEDEPTDLAEDKEEEDVSGEPEASPSADTTILFVKGEDFPANNIVKFLVGFTNKGTEDFIVESDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTIIEREDGLDGETIFMYMFLAGLGLLLVVGLHQLLESRKRKRPIQKVETGTSSQNDVDMSWIPQETLNQINKASPRRLPRKRAQKRSVGSDDRDW", "length": 288, "header": "tr|A0A5G2QG70-1|A0A5G2QP96_PIG Computationally mapped isoform of Translocon-associated protein subunit alpha OS=Sus scrofa OX=9823 GN=SSR1 PE=1 SV=1 CANONICAL=A0A5G2QP96-1" }, "locus": { "chromosome": "7", "start_pos": 4685791, "end_pos": 4663537, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090505.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090505.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061020.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061020.1" } ] } }, { "isoform_ac": "A0A5G2QP96-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP96/entry", "sequence": { "sequence": "MRSLPRLLLLLLLVFPATLLLRGGPGGSLAVAQDLTEDEETVEDSIIEDEDDEAEVEEDEPTDLAEDKEEEDVSGEPEASPSADTTILFVKGEDFPANNIVKFLVGFTNKGTEDFIVELDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTIIEREDGLDGETIFMYMFLAGLGLLLVVGLHQLLESRKRKRPIQKVETGTSSQNDVDMSWIPQETLNQINKASPRRLPRKRAQKRSVGSDE", "length": 285, "header": "tr|A0A5G2QP96-1|A0A5G2QP96_PIG Isoform 1 of Translocon-associated protein subunit alpha OS=Sus scrofa OX=9823 GN=SSR1 PE=1 SV=1 CANONICAL=A0A5G2QP96-1" }, "locus": { "chromosome": "7", "start_pos": 4685791, "end_pos": 4665359, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074161.2", "url": "https://www.ensembl.org/id/ENSSSCT00000074161.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065891.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065891.1" } ] } }, { "isoform_ac": "A0A5G2RC70-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RC70/entry", "sequence": { "sequence": "MRSLPRLLLLLLLVFPATLLLRGGPGGSLAVAQDLTEDEETVEDSIIEDEDDEAEVEEDEPTDLAEDKEEEDVSGEPEASPSADTTILFVKGEDFPANNIVKFLVGFTNKGTEDFIVESDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTIIEREDGLDGETIFMYMFLAGLGLLLVVGLHQLLESRKRKRPIQKVETGTSSQNDVDMSWIPQETLNQIMQSRRDKASPRRLPRKRAQKRSVGSDERRRKETH", "length": 297, "header": "tr|A0A5G2RC70-1|A0A5G2QP96_PIG Computationally mapped isoform of Translocon-associated protein subunit alpha OS=Sus scrofa OX=9823 GN=SSR1 PE=1 SV=1 CANONICAL=A0A5G2QP96-1" }, "locus": { "chromosome": "7", "start_pos": 4685791, "end_pos": 4653483, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072679.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072679.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071812.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071812.1" } ] } }, { "isoform_ac": "F1RW78-1", "url": "https://www.uniprot.org/uniprotkb/F1RW78/entry", "sequence": { "sequence": "MRSLPRLLLLLLLVFPATLLLRGGPGGSLAVAQDLTEDEETVEDSIIEDEDDEAEVEEDEPTDLAEDKEEEDVSGEPEASPSADTTILFVKGEDFPANNIVKFLVGFTNKGTEDFIVESDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTIIEREDGLDGETIFMYMFLAGLGLLLVVGLHQLLESRKRKRPIQKVETGTSSQNDVDMSWIPQETLNQIMQSRRDKASPRRLPRKRAQKRSVGSDE", "length": 290, "header": "tr|F1RW78-1|A0A5G2QP96_PIG Computationally mapped isoform of Translocon-associated protein subunit alpha OS=Sus scrofa OX=9823 GN=SSR1 PE=1 SV=4 CANONICAL=A0A5G2QP96-1" }, "locus": { "chromosome": "7", "start_pos": 4685791, "end_pos": 4665359, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000001115.5", "url": "https://www.ensembl.org/id/ENSSSCT00000001115.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000001093.4", "url": "https://www.ensembl.org/id/ENSSSCP00000001093.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1RW78", "url": "https://www.uniprot.org/uniprotkb/F1RW78" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A6QLP7-1", "protein_name": "Translocon-associated protein subunit alpha", "gene_name": "SSR1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSSLRRLLLLLLLVFPATLLLRVGPGGSLAVAQDLTEDEETVEDSIIEDEDDEAEVEEDEPTDLAEDKEEDDVSGEPEASPSADTTILFVKGEDFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTIIEREDGLDGETIFMYMFLAGLGLLVVVGLHQLLESRKRKRPIQKVEMGTSSQNDVDMSWIPQETLNQINKASPRRLPRKRAQKRSVGSDE", "length": 286 }, "evidence": [ { "id": "A0A5G2QP96", "url": "https://omabrowser.org/oma/group/A0A5G2QP96/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P43307-1", "protein_name": "Translocon-associated protein subunit alpha", "gene_name": "SSR1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRLLPRLLLLLLLVFPATVLFRGGPRGLLAVAQDLTEDEETVEDSIIEDEDDEAEVEEDEPTDLVEDKEEEDVSGEPEASPSADTTILFVKGEDFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLHQLLESRKRKRPIQKVEMGTSSQNDVDMSWIPQETLNQINKASPRRLPRKRAQKRSVGSDE", "length": 286 }, "evidence": [ { "id": "A0A5G2QP96", "url": "https://omabrowser.org/oma/group/A0A5G2QP96/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P45434-1", "protein_name": "Translocon-associated protein subunit alpha", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MMNLRVLFLALLLLASPLLQVARCQSDAEDHSSLVDDVVGENTDDAVEEDDHDLDMNLSSFPGVETVCVFPKNSAKLVPAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLVQNLTMLRLNNASIPTSLQATFPYIFAVSQYLQPGAFDLVGYIIYDVEGKPYQSVFYNGTIEVVESGGLLSGESVFLLTLGIGLLLLLGLWAYSQVQRLTKKTKKVSKVEVGTRSTEASLDEWLEGTTLAKTSSGKTKNKKN", "length": 258 }, "evidence": [ { "id": "A0A5G2QP96", "url": "https://omabrowser.org/oma/group/A0A5G2QP96/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q54R45-1", "protein_name": "Translocon-associated protein subunit alpha", "gene_name": "ssr1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNKLITLLLAVLMIISCVYSDDVEITDDEVVQATPTSDVSFSYIFPDNQDKNFAAGSVVEVLVGFTNNADKALNITHIFASLNHPQDFSVFIQNYTRGDFGIAVEKGHHATLAYRFVPSEYLEPREFGLLISLEYQDGAQNFTQTFFNSTINITEKETSFDMDSFFLILLGLGFVGGIGYIVYGKMPKQKKVRTVSKVNKNAVRVETEDETAEWLSGTSAASSKVKSVQKVVKKNK", "length": 236 }, "evidence": [ { "id": "A0A5G2QP96", "url": "https://omabrowser.org/oma/group/A0A5G2QP96/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q7TPJ0-1", "protein_name": "Translocon-associated protein subunit alpha", "gene_name": "Ssr1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRLLPRLLLLFLLAFPAAVLLRGGPGGSLAVAQDLTEDEETVEDPIIEDEDDEAEVEEDEPTDLAEEKEEEEDVSSEPEASPSADTTILFVKGEDFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTIVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVVVGLHQLLESRKRKRPIQKVEMGTSSQNDVDMSWIPQETLNQISAGRERHTEVTLQLHRPVVSDASYACFSCFRKLPRPATLAAWTSSLRQLAVCGI", "length": 319 }, "evidence": [ { "id": "A0A5G2QP96", "url": "https://omabrowser.org/oma/group/A0A5G2QP96/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9CY50-1", "protein_name": "Translocon-associated protein subunit alpha", "gene_name": "Ssr1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRLLPRLLLLFLLAFPAAVLLRGGPGGSLALAQDPTEDEEIVEDSIIEDEDDEAEVEEDEPTDLAEDKEEEDVSSEPEASPSADTTILFVKGEDFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVVVGLHQLLESRKRKRPIQKVEMGTSSQNDVDMSWIPQETLNQINKASPRRQPRKRAQKRSVGSDE", "length": 286 }, "evidence": [ { "id": "A0A5G2QP96", "url": "https://omabrowser.org/oma/group/A0A5G2QP96/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9W335-1", "protein_name": "Translocon-associated protein subunit alpha", "gene_name": "l(1)G0320", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MRHLMFLMLMVLPIVICTFSAPNKFGAYAAEAVEDDLVDVEGEEGAVTGEDAEADEDSDTGSSSSPNADTYLLFTKPLYTPGQQLDLPGGKPVEFLIGFTNKGAEEFVIETVEASFRYPMDFNYFIQNFSAVAYNREVKPGFESTVSYTFLPSDQFAGRPFGLNIALAYRDANGIQYNEAVFNETVLISEVDEGLDGETFFLYVLLAGIVVLLLVIGQQYLLGSSGKRKRAAAKKVIETGTANDSTIDYDWVPQETLRALQKSPPKSKTPKTSPKPTKPASPKAASQQSPKQRKVKRSAGDD", "length": 302 }, "evidence": [ { "id": "A0A5G2QP96", "url": "https://omabrowser.org/oma/group/A0A5G2QP96/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP96", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP96" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP96", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP96" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 135, "end_pos": 137, "annotation": "n_glycosylation_sequon" }, { "start_pos": 190, "end_pos": 192, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QP96-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 285, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QP96-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QP96" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 135, "end_pos": 137 }, { "start_pos": 190, "end_pos": 192 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QG78-1", "uniprot_ac": "A0A5G2QG78", "uniprot_id": "A0A5G2QG78_PIG", "mass": { "chemical_mass": 34999.0, "monoisotopic_mass": 34999.0 }, "refseq": { "ac": "XP_020938096", "name": "olfactory receptor 5AN1-like", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020938096" }, "gene_names": [ { "name": "LOC100523228", "type": "recommended", "evidence": [ { "id": "A0A5G2QG78", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG78" } ] }, { "name": "LOC100523228", "type": "synonym", "evidence": [ { "id": "XP_020938096", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020938096" } ] } ], "protein_names": [ { "name": "Olfactory receptor", "type": "recommended", "evidence": [ { "id": "A0A5G2QG78", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG78/entry#names_and_taxonomy" } ] }, { "name": "olfactory receptor 5AN1-like", "type": "synonym", "evidence": [ { "id": "XP_020938096", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020938096" } ] } ], "function": [ { "annotation": "Putative odorant or sperm cell receptor.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG78", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG78#function" }, { "database": "UniProtKB", "id": "ARBA00003929", "url": "https://www.uniprot.org/uniprotkb/ARBA00003929#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG78", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG78" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LOC100523228", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG78", "locus": {} } ], "crossref": [ { "id": "A0A5G2QG78", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QG78", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000042426", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000042426", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd15417", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd15417", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100523228", "url": "https://www.ncbi.nlm.nih.gov/gene/100523228", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000276", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000276", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000725", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000725", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050516", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050516", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100523228", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100523228", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QG78", "url": "https://www.orthodb.org/?gene=A0A5G2QG78", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR26452", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR26452", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13853", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13853", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020938096", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020938096", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QG78", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG78", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QG78-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG78-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTRGENTTNITDFVLLGFSDFPQIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHTPMYFFLRNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECGLMTVMAYDRYAAICNPLLYSSTMSPSLCGRMVLGSYMAGLSASLSQVCAMLQLHFCGPNVIHHFFCDMPQLLVLSCSDTFFLQLLTLVLTVIFGILNALVIMMSYVYIVISVMKITSTKGWSKAFNTCASHLTAVTLFYTSIIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDAWKRLKKRKECC", "length": 312, "header": "tr|A0A5G2QG78-1|A0A5G2QG78_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN=LOC100523228 PE=3 SV=1 CANONICAL=A0A5G2QG78-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QG78-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG78/entry", "sequence": { "sequence": "MTRGENTTNITDFVLLGFSDFPQIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHTPMYFFLRNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECGLMTVMAYDRYAAICNPLLYSSTMSPSLCGRMVLGSYMAGLSASLSQVCAMLQLHFCGPNVIHHFFCDMPQLLVLSCSDTFFLQLLTLVLTVIFGILNALVIMMSYVYIVISVMKITSTKGWSKAFNTCASHLTAVTLFYTSIIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDAWKRLKKRKECC", "length": 312, "header": "tr|A0A5G2QG78-1|A0A5G2QG78_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN=LOC100523228 PE=3 SV=1 CANONICAL=A0A5G2QG78-1" }, "locus": { "chromosome": "AEMK02000637.1", "start_pos": 60084, "end_pos": 59149, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090637.1", "url": "https://www.ensembl.org/id/ENSSSCT00000090637.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063263.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063263.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG78", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG78" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100523228", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100523228", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A075B5S0-1", "protein_name": "Immunoglobulin heavy variable 16-1", "gene_name": "Ighv16-1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "EVQLVESGGSLGQPGGSTKLSCEEASGFTFSDHWMDWFRQAPGMRLEWLANTNHDESGKGYAESVKDRFSISRDNSENLLYLQMNSLRNEDTALYYCAR", "length": 99 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B603-1", "protein_name": "T cell receptor alpha variable 6D-6", "gene_name": "Trav6-6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSPGFVAVILLILGRTHGDSVTQTEGPVTVSESESLIINCTYSATSIAYPNLFWYVRYPGEGLQLLLKVITAGQKGSSRGFEATYNKETTSFHLQKASVQESDSAVYYCALG", "length": 114 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B625-1", "protein_name": "T cell receptor alpha variable 4N-3", "gene_name": "Trav4n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERNLGAVLGILWVQICWVSGDKVKQSPSALSLQEGTNSALRCNFSIAATTVQWFLQNPRGSLMNLFYLVPGTKENGRLKSAFDSKESYSTLHIRDAQLEDSGTYFCAAE", "length": 110 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B695-1", "protein_name": "T cell receptor alpha variable 9D-3", "gene_name": "Trav9d-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLALLPVLGIHFLLRDAQAQSVTQPDARVTVSEGASLQLRCKYSYFGTPYLFWYVQYPRQGLQLLLKYYPGDPVVQGVNGFEAEFSKSNSSFHLRKASVHWSDWAVYFCAVS", "length": 113 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6B4-1", "protein_name": "T cell receptor alpha variable 6-4", "gene_name": "Trav6-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNTSPVLVTVMLLFMLGMRKTHGDSVTQKQGQVTLSEDDFLFINCTYSTTTYPTLLWYVQYLGQGPQLLLKVTTANNKGISRGFEATYDKGTTSFHLQKASVQESDSAVYFCALV", "length": 115 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6D8-1", "protein_name": "T cell receptor alpha variable 3-3", "gene_name": "Trav3-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "GEQVEQRPPHLSVREGDSAVITCTYTDPNSYYFFWYKQEPGASLQLLMKVFSSTEINEGQGFTVLLNKKDKRLSLNLTAAHPGDSAAYFCAV", "length": 92 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B759-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4E", "gene_name": "PPIAL4E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A075B767-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4H", "gene_name": "PPIAL4H", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFDITVDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTDDKSIYGEKFDDENLIRKHTGSGILSMVNAGPNTNGSQLFICTAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WP50-1", "protein_name": "Secretoglobin, family 1B, member 15", "gene_name": "Scgb1b17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMLAGAVVIFGVALLLLSSWGDCGICPAMKEDVHLFLNGTSEEYVEYVKQYKDDPEILENTEKIKQCVDSTLMEEDKAHANGFIEKIEASPLC", "length": 93 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPA9-1", "protein_name": "Secretoglobin, family 2B, member 18", "gene_name": "Scgb2b18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQSCYSEERIRNILLEPKIMEAMVASPECRSYHSFNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPG5-1", "protein_name": "Predicted gene 13283", "gene_name": "Gm13283", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLADLRSVPGHQCLRDRTDFPCPWKEGTNITQMTLGETTSCYSQSLRQVLHRFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPY7-1", "protein_name": "RNA binding motif protein Y-linked family member 4", "gene_name": "Rbmyf4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKR", "length": 166 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQA9-1", "protein_name": "Secretoglobin, family 2B, member 21", "gene_name": "Scgb2b21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACVPFFEGYASVVSGSRVWMYQEFQAFDATAEEKVALEKIQGCYREESLRNILLEPKIMEAMVASPECLSYYSSNNIRCILDLLSKLLGQ", "length": 112 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQJ0-1", "protein_name": "Secretoglobin, family 1B, member 11", "gene_name": "Scgb1b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLVAAVVILGAALLLLTSGGDCGICPAIKEDVRLFLNGTSEEYVEYVKQYKDDPVILENTAKINQCVDSTLTEKDMTHTTTFLKKIEDSLLC", "length": 93 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQP8-1", "protein_name": "Predicted gene, 21698", "gene_name": "Gm21698", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHGQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR36-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r90", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNEAMKTTEEVALQIVLLCQFGIGTMANILLFIHNFSPLLTGCQLRPKQVICTNMAVSSILILFMTVFPNNVFVVQRNLMNDLQCKLEYFLRMVARSINLCSTCVLSTYQFVTLLPGNFGEMMVRGRRSKVISYSCCSCWLFGVLYNVYIPMKVSGPQNTHNKTDIKSKWFCVTSGFSVGIMFLWFAHDAIFISIMIWTSVSMVLLLYRHYQRLQYIFPPHQGTRGYAEIRAAHSIAMLVVTFVSFYLLHCICFILHIVFVDSRLWLRHVGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYRKPVI", "length": 309 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR44-1", "protein_name": "BTB domain containing 35, family member 15", "gene_name": "Btbd35f15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR49-1", "protein_name": "Secretoglobin, family 2B, member 11", "gene_name": "Scgb2b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQGCYSEERIRNILLEPKIMEAMVASPECRSYHSLNNFRSILEFISNLLGE", "length": 112 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSM5-1", "protein_name": "Predicted gene 29049", "gene_name": "Gm29049", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTSLKKKSRRKPSSQALGNIVGCRISYGWKEGNEPVTHWKAIILGQLPTNPSLYLVKYDGIDSVYGQELHSDERILNLKVLPHKVVFLQVRDVHLASALVCREVQHKFEGKDGSEDNWSGMVLAQVPFLQDYFYISYKKDPVLYVYQLLDDYKEGNLHIIPETPLAEARSGDDNDFLIGSWVQYTRDDGSKKFGKVVYKVLANSTVYCIKFLGDLHIYVYTLVSNIT", "length": 227 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSN2-1", "protein_name": "BTB domain containing 35, family member 16", "gene_name": "Btbd35f16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLLFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLNFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WUL8-1", "protein_name": "NBPF family member NBPF19", "gene_name": "NBPF19", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRNLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLFHSQERELTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGPYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNSVLMEVEEPEVLQDSLDGCYSTPSMYFELPDSFQHYRSVFYSFEEEHISFALYLDNRFFTLTVTSLHLVFQMLVIFPQ", "length": 3843 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WXS9-1", "protein_name": "TBC1 domain family member 3I", "gene_name": "TBC1D3I", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKMKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087X179-1", "protein_name": "TBC1 domain family member 3E", "gene_name": "TBC1D3E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDQAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKKSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0A0MQP3-1", "protein_name": "BTB domain containing 35, family member 12", "gene_name": "Btbd35f12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDSDLSITPLEVPQGLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YW58-1", "protein_name": "Immunoglobulin heavy variable V8-2", "gene_name": "Ighv8-2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGRLTFSFLLLLPVPAYVLSQVTLKVSGPGILQPSQTLSLACTFSGISLSTSGMGLSWLRKPSGKALEWLASIWNNDNYYNPSLKSRLTISKETSNYQVFLKLTSVDTADSATYYGAWR", "length": 119 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXW2-1", "protein_name": "Predicted gene, 20773", "gene_name": "Gm20773", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKIFKVEKS", "length": 232 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXX7-1", "protein_name": "Predicted gene, 20807", "gene_name": "Gm20807", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHTFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKVLEVEKS", "length": 232 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0B4J1J8-1", "protein_name": "T cell receptor gamma, variable 4", "gene_name": "Trgv4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNPGSQALLPLYLPWEANLADENPLLKVVIFLCLLTFGHGKLEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYG", "length": 138 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JE01-1", "protein_name": "Predicted gene, 21663", "gene_name": "Gm21663", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADPPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JGR8-1", "protein_name": "Predicted gene, 21680", "gene_name": "Gm21680", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPSESNEGRRRWTWRMWMAHRQTTSPVPVTSKKQFEKEEKELIKKIQLTTKEINELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELVLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JMD5-1", "protein_name": "PRAME family member 33", "gene_name": "PRAMEF33", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSLQAPSRLLELAGQSLLRNQFLTIFTLDELPREVFPLMFMEAFSMRRFEALKLMVQAWPFLRLPLGSLMKTPHLETLQAVLRGLDTLVAQKVRPRRWKLQVLDLQDVDENFWTIWSGARVLSCSPEAMSKRQTVEDCPRMGEHQPLKVFIDLCLKESTLDECLSYLFGWIHYRRGLVHLCCSKVQNYSMPTSSFRNLLERIYPDSIQELEVWKKCSLNKTGKFAPYLSQMSNLRELFLAFGYERELYVSVQWPCIPDLDSPFLCLYYPQMLYIKKISNIKEHLEHLLRYLKNPLGAFIFSDAYLADRDMECLSQYPSLSQLKELRLIHILMWTTNLQPLGALLEKVAATLKTLVLKDCRIQDPQLRVLLPALSHCSQLTTFNFHGNETSMNALKDLLRHTRGLSKLGLELYPAPLESLDYKGHVNWEILTPIRAELMRTLREVRQPKRIFFGPVPCPTCGSWPSEKVDFHLCS", "length": 474 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JNH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC124905359", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKIANNTVVTEFILLGLTQSQDIQLLVFVLILIFYLIILPGNFLIIFTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFFSEKKVISYRGCITQLFFLHFLGGGEGLLLVVMAFDRYIAICRPLHCSTVMNPRACYAMMLALWLGGFVHSIIQVVLILRLPFCGPNQLDNFFCDVRQVIKLACTDMFVVELLMVFNSGLMTLLCFLGLLASYAVILCHVRRAASEGKNKAMSMCTTRVIIILLMFGPAIFIYMCPFRALPADKMVSLFHTVIFPLMNPMIYTLRNQEVKTSMKRLLSRHVVCQVDFIIRN", "length": 316 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JTV6-1", "protein_name": "RIKEN cDNA 4931429L15 gene like", "gene_name": "4931429L15Rikl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQFNPFSQDTWRHGHRRAYSNISERLSCLTLQEPSVSHLYQIFSPGDRRSYLLDDSLSNSIQRESLAVPMGLEDSGSRGQQKQQQPGAVLEDLEEQEIAPTDVKYRLQLLDEAPLRSKSSSVQSQGHKPGWIPSSKTHREWFKPWKMDMTYPENERSHSGHTQGRRMTPRAQWRHVEYDSQDQDTQSPVWSQALFPGLDKSSQGVIQCTQHVSREREMVSGWSMTHAPQEMGQAKQGPAFLKTKGTAKFNVATTARMSCLPPLKLLEKKVKSRCPPNTPGIFQDWRAQPQGLYGSDERLLAPFEDQVNTRVTYMPLFTEKVKFVSPKTAVSNPKQTHSQLSRTNQPAFPGQFRNWTSGREHLEKGLPE", "length": 368 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JVP7-1", "protein_name": "40S ribosomal protein S26", "gene_name": "Rps26-ps4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKKRRNNGRTKKGRGHVQPIGCANCSWCVPKDKAIKKFVIWNIVETAAVRDISEARIFDAYVLPKLYVKLHYCVSLAIHSKVIRNQSHEARKDRTSPPRFRPAGAAPRPPPKPM", "length": 115 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW93-1", "protein_name": "High mobility group protein B4", "gene_name": "Hmgb4l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGKDSKVRPKVNVSPYVHFMMDFRNQTREQQPNTYYDFTEFSRKCSEKWKTISKKEKKKYEALAKRDKDRYQREMRNYSGPRRERRRRDPDAPRKPPSSFLLFSQDHFDEIKEQHPNWTVAQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAYYHQCQRGE", "length": 168 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW96-1", "protein_name": "Zinc finger protein 94 like 1", "gene_name": "Zfp94l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLPRGSCDVMLESLRNVASLGHRIGTPDGLLRLKREDMFWLLTVARWSSGSMGDKNLEDMEFLEEVGLRHLPHEELFCSQIWQRITRELTKVRDCRVRVGENGSPMKRDNREDEYSKHSSQNSVFQVHHRECHEEEANERDFGCSHHLRTSTGEKSYKCEKCHNASHWFSSLQSHQGVCDRPRWNKSVSQFKIFRQWPLFHYQQSMPNGENAQEYEACGNAGKNSSGQTALFVHTAEEPYSCEECGARFSQSSYLQVHQRVHTGEKPYKCEECGKGFGWLSQLHAHHQSHTGEKPYTCDACGKGFSYSSHLNIHCRIHTGEKPYQCEECGKGFSQASNLLAHQRGHTGEKPYQCDACGKGFSRISDFNIHIRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGEKPYKCNTCGKSFRRSSDLNVHCRIHTGEKPYRCEKCDKVFSQFSSLQVHQRVHTGEKPYQCSECGKGFSVGSQLQAHQRCHTGERPYQCEECGKGFCRASNFLAHHGVHTGEKPYRCDMCGKHFRQRSYLQAHHRVHTGEKQFRCEECGKGFSWSSYLQAHQRVHMGEKPYKCEECGKGFSWSSSLLTHQRVHAEDEGQKDLSSSGGSYRK", "length": 616 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JYP5-1", "protein_name": "Olfactory receptor", "gene_name": "Or8g52b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEGNHSRVTEFILTGLTDKPELQLPLFLLFLGIYLLTVLGNLGMIILILLSSHLQTPMYFFLSGLSFIDLGYSTVIIPKMLVNFVTEKNVISYPGCMTQLYCFIAFVLCECYMLSAMAFDRYVAICNPLRYNVTMSYQVCFWMIGGVYSIGFIEATIHTVCMLQVFFCKANVVNHFFCDLLPLFQLACSSTFVNETVLLCLSTLNFCVPTLTILSSYSFIIARIIRIKSTESRFKAFSTCSSHFSSVAVFFGSLGFVYFQPSSVSSKDQGKVSSVFYTIIVPMLNPLIYSLRNKDVKLALNKLFQKKIFHM", "length": 312 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K381-1", "protein_name": "Killer cell lectin-like receptor, subfamily A, member 4", "gene_name": "Klra4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQEVTYSTLRFHNSSGLQNQVKTNETQGPRETGHRGCSVSWHLIMIPLGILCSILLVTVAVLVTHIFQYSQEKHELQEALNKLHHNYSTMQNESYLNEEMLGNKSSECDAYKSVLDSLNRQQNTCLRLTNIVLDCLQHKGRQVNVHLFCCGIKCYYFIMDKKQWKECEQACQGCKLSLLTIDDEDELKFLQLQVTPDSYWIGLSYDNKKHDSAWIDNNPSKL", "length": 224 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K3S0-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c109", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNQSFVNEFILLGLSQNPQIKKISFVIFLLVYIATLVGNMMIVVTIAYSPALLGSPMYFFLAVLSFLDACVSSVVTPKMIVDMVYERKSISFECCMTQVFAVHFLTAVEVIVLAAMAYDRYVAICKPLHYSSIMNRRLCGTLVGVAWAGGFLHSIIQIAFTLPLPFCGPNVIDHFICDLFPLLKLACTDTHIFIILVFANSGSICIIIFSFLLISYGVILFALRAHSSEGRRKALSTCGSHITVVVFFFVPCILIYARPTSAFSFEKNVFVFTDVLTPLLNPMVYTFRNKEMINAIRKMWKRLIVVSDKY", "length": 311 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K622-1", "protein_name": "Histone RNA hairpin-binding protein", "gene_name": "Slbpl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLSSRMEMVSVGVTTEPCHARWEVETDEVVLRRRQKQIDYGKCTPGYQSFLQQVPRAQRQPGFHPQTPNKNRRYSRRSWDAQIRQWRRALHTWDPPSQPLHDRQAEGKAAGNFLRPVDTAPLDDLLDNWPQDPESSENWDRGEKEAQFAYLKVPASCPPQLKDELLHH", "length": 169 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K698-1", "protein_name": "Lamin tail domain containing 1", "gene_name": "Lmntd1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSHLASSHRVQKSSLARPERRAKSPSYTDISFWVPVMHRVGSQYQFESVCEQSSGYPGMPAQQVTPVPSQRGGILRKEEKTGTITPSKQHSSVHFFPKVMDSSSTLHLLSGSFSHEASANFHQIPSAQDSLSPGGLLTSKSNVPSCSRKDSIPGKQSTHQAASPGTSLMTLKKQPKPSSDLDTYVLGDGEDYFLSLFGDSKKLTSHTSQAEDVSKHLSVILEEVGQFVSSSLGDIKIAEVNVKGFFVRLVNSSNEKEVEIGNYILQQNVNGQAVSLYRFPHNITMQASGTVTVWAAASEAKPQQPTDFVWEEQSRFRSSPDCTTILCKPSGEAIAWYTPIHWKQAWEKLETDIEFERCSVVIPSLKSHIFGRTTSSVSSINKEKQEPTQKTPPQVCSVLLREKEILLTVLPNKSPWCRSPDTPPHPYSSLIEWHDSDFPGSSLGTQPKPQSTKPKPDPGTKEKKSTR", "length": 467 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6E6-1", "protein_name": "Rho GTPase-activating protein 20-like", "gene_name": "LOC120093152", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDEELVRANKTCTCKTIFFYWATGNALATFRSEEQKVQWYTFLTSRSISEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHKIEDYQLWFSPGHKEAPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERRRKSCMTSCFHGGCVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTKSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAVASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQAEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKMFYGRDLSKKLSIIQFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKANTKELEMSSAVPHEGGPTAGHNGTTSKYNVPQEIILHD", "length": 835 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6V9-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVVFFLGQGSYGRVRLAWHRRTQALVAIKTVEISKDTIRGILSEMTTLESLNHPNIISLYEVLITGTGVHFILQYAPGGNLGKLISEEGPLPEEKAKKMFGQVVSAIRYCHSLDIVHRDIKPQNILIDGEGNIKLIDFGQAIKCKPGTLLSRHCGTRDFNAPELVLREPYDGKSSDVWSLGVVLYFFTTGYLPFRGKTINDVEERITTGTYTIPTHLSGQLENLIHQILRVSPDMRPSVEEIENHPWIKKCEFKILPKTDPDYKIIEMLCAMGYKAKDILESLQKKRYDEPMGAYLSLKDHVSKGFDVGYITPAKPGDPCPPPPPSPAHPSVFGLPLRRRASEPIFGLHHRPPSREQNPLDLILSGLKMSRCVSMPPIAVYYPKKERSTSTRALHSTPVACPCVSNNMSEVEIILPPKQDIEMNTSSPPQRMGWFKRLRKGIRDCFSRLCCLPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K894-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAHLLNVTEFIFLGLSPNKEGQRVCFVLFLLLYMAIVLGNLLMVVTVAASRNLGSPMYFFLSFLSFVEICYSSTTAPKLIFDLLAEKKSISVWGCMTQLFFMHFFGGTEIFLLTMMAYDRYVAICKPLHYTSIMNQQVCAVLVGSAWIGGFVHSFSQILLILPLSFCGPNVIDHYFCDLLPVLKLACSDTFLIGLLIVVNGGTLSVISFVVLLASYLVILFHLRTQSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRPSDTLPVDKMIAVFYTVITPLLNPLIYSLRNAEVKKAMKNLWFRIMKADEK", "length": 309 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KB39-1", "protein_name": "Myb/SANT DNA binding domain containing 5 like 1", "gene_name": "Msantd5l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQREANQGESLENTEESNVGKSVKEEEQRPSGRSRSSWTDSEIRVFLQEWEVVEQEMGQPGRKLHKKTKSLCQRLYQQGLKKSWKSCFHLLLSLQDLHRTLCNERPGIEPLFSPYSEALYRILGSTPHESWFPGPLYDEADDSMLPVYPQPPMYQPSDYGITVPSAQLQGNPVPMMCQEDSPFPTWEPWNPSYPLSVPHLLPGFAPGDPSLQQPWSMCDLHQDPQ", "length": 225 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KBC9-1", "protein_name": "Leukocyte immunoglobulin-like receptor subfamily B member 3-like", "gene_name": "Lilrb3l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTFTFTALLCLGLTLRLWIPVLTGSLPKPILRVQPDSVVSMGTKVTFVCEETIGVKESHLYRNGNLQRTVLKNHQKPTNKTEFSFSNVDQQMQQYQCSYRTQTKSSDYSEPLELVVTGAYSKPSLSAQTNPVVTSGGYVTLKCEPSQDNHTLILTVEGSQKHSWRKDPECNRYTEKCHALFYVGPLTSNQRWIFRCYSYEKHTPQVWSAPSEPVELLVSGKLQKTTIKAEPGSVIRSGRAMTIWCQGDLDAEIYFLHKEGSHNTQSTQTLQQPGNKAKFLIPSVTQRHAGQYRCYCYSSAGWSEPSDTLELVVTGIYYYGVKLSGLPSPVVPEGGNVTLHCTSHSNYDKFILTKEDQKFTSSLDAEYIPSTGQHQALFVMGPMTPNYSGTFRCYGYYKHTPQLWSVPSELLKIFISGPSRKPSLLSHQGHILEPGMSLTLQCYSDTKYDKFALYKEGGTDIIESFSQWTKAGLSMTNFTLSVMPNSTVHSGENVTLMCWSTYSVDTFILSKEGSGQPPLRLKSKIQDQQYQSEFSMSGVTSKLSGTYRCYGSHDSSLYLKALIGVSVAFLLFLFILIFILLRRRHQEKFRKDDEDAQKGKELQLSTGAAEPVTRDRGHQKRSNPAAATQEESLYASVEDMETKDGVELDTWKPPEGDPQGETYAQVEPSRLRRAGAISPVVSREQLNTKYEQAEEGQEVDSQATESEEPQDVTYAQLCSRTLRQGTAAPPLSQAGEAPEEPSVYAALATARPGAVPKNKKQ", "length": 761 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KIH5-1", "protein_name": "Major histocompatibility complex class I LLA precursor", "gene_name": "mhc1lla", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTGKVLFVLFLLSAPTTVLTDSHSLWLLGTYIKGETQFPKLSFTVMLDDLRVGFYNSETKEFIPRDNTTNEDEAVSDVLTVIQNTLEPFMMSTLTFKNGTESPQLFQITWHCELLDNDKPGQIIFKIAFSGSTTDEVSFYNDNFTCQCQNNMATVPLESFQMHYETVCYPNCIATIRDYLKKRQTQVNGKVQPKVRLIKKVHPKSGGFRLSCLATEFYPHSINLTLLRDGQPVSDHEVTGGNLLPNGDGTYQMRKSLEIRADEREKHKYTCSVSHLSLDKILDIDFEFDPSFLIKIVIPVVVLLSLMLVLTAVLIHKCKNKRAESKETITTASTPEPTEMSETLRK", "length": 346 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IEQ0-1", "protein_name": "Guanine nucleotide-binding protein subunit alpha", "gene_name": "gna11a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTLESMMACCMSEEAKESKRINAEIDKQLRRDKRDARRELKLLLLGESGKSTFIKQMRIIHGTGYTDEDKRGYTKLVYQNIFTSMQAMIRATEHLKIPFRFEDNKKNALLVREVDVEKVCSFEQPYVAAINKLWMDPGIQEAYDRRREYQLSDSTKYYLNDLERISSRGYMPTQQDVLRVRVPTTGIIEYPFDLENIIFSYLSDLERISDPSYLPTQQDVLRVRIPTTGIIEYPFDLQSIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKILCSHLVDYFPEFDGPQNDAQSAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQHNLKEYNLV", "length": 400 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4ILG2-1", "protein_name": "FXYD domain-containing ion transport regulator", "gene_name": "fxyd2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGVESPEHSDADFTYDYELIRRGGLIFAAVLFCLGMVIIFSKKLRCGKSSATHEDNGDL", "length": 59 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IU63-1", "protein_name": "Metabotropic glutamate receptor 5", "gene_name": "grm1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMLILRMNFFIVFLLFCTRLHLSTERSAVSRAASRSVARMDGDIIIGALFSVHHQPSAEKVAERKCGEIREQYGIQRVEAMFYTLDRINSDPYLLPNITLGCEIRDSCWHSSVALEQSIEFIRDSLISIRDEREGPKWCVEGNPSAQPPATKKPIAGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSIDLSDKTLYKYFLRVVPSDTLQARALLDIVKRYNWTYVSAVHTEGNYGESGMEAFKELASQEGLCIAHSDKIYSNAGEKHFDRLLRKLRERLPKARVVVCFCEGMTVRGLLMAMRRLGVAGEFLLIGSDGWADRDEVVEGYEEEAVGGITVKLQTEEVTSFNDYFLKLRLATNNRNPWFAEFWQHRFQCRLAGHPQENTNYRKNCSGYESLEDNYVQDSKMGFVINAIYAMAHGLHDMHEHLCPGHVGLCEEMDPIDGSKLLDFLLKTSFAGVSGEDVWFDENGDSPGRYDIMNLQYVEPGVFDYINVGSWHEGILSIDDYMIQMNRSEMVRSVCSEPCSKGEIKVIRKGEVSCCWICTPCKDNEYVQDEFTCKACELGWWPDEELQVCEPLPLRYLEWSHPESIAAVVFSCLGILVTSFVTLVFILYRDTPVVKSSSRELCYIILAGIFLGYICPFTLIARPSIASCYLQRLLVGLSASMCYSALVTKTNRIARILAGSKKKICTRKPRFMSAWAQVVIAFILISMQLTLEVTLIILEPPEPIKSYPSIREVFLICNTSNMGMVAPLGYNGLLILSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTSFSVSLSVTVALGCMFTPKMYIIIAKPERNVRSAFTTSDVVRMHVGDGKIACRSNSLLNMFKRKKNASGNANSNGKSVSWSEPGSRHPPKGEHMWHRLSVHVKKQEAGSNQTAIIKPLTNTYNNPGMEFSDLSTKTLYNVAEEDEIDPIRYNPSNSPHLMAPVSKPMKEVGANLTFYTPEQHVPQQNSVLPQHAMIEHFQDDVVKYNSNMADLDEIISLPEPTDGIILALQPQVLHPHPILPMNVYQDEPSSPLEEVENEQFGLLHGYMYDNAQIHDEEELVQIKMAMEDSMALMPPSPFRDSLGSGSPVRNSPVSESVLCTPPSVTYASVILRDYKQSSSTL", "length": 1158 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IUN8-1", "protein_name": "Trypsin inhibitor ClTI-1-like precursor", "gene_name": "spink2.9", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLAQIVLLLCLSVMATAADKCPSVPNCSRYHPHACTMEYWPVCGSDGNTYGNECELCATIFEEKLNIILISKKGEC", "length": 76 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4J2B9-1", "protein_name": "BTB domain containing 35, family member 23", "gene_name": "Btbd35f23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPVSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFTNILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQKCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICNLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNQEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A140T8Q5-1", "protein_name": "BTB domain containing 35, family member 21", "gene_name": "Btbd35f21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMILYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GQX3-1", "protein_name": "Cortexin domain containing 2", "gene_name": "Ctxnd2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCVLMEDSSMSNGIDVDKGFAIAFVVLVFVFLIVMVFRCVKLVKNPYEVSSTTADLPLN", "length": 59 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GRH6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 3", "gene_name": "Zscan4-ps3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVRQFPHGARRASQGTPSHHVDIQSPPTTADVTMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGFPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCKSHQKRFCRDAKLYKCEECSRMFKHARSLSSHQKTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GS00-1", "protein_name": "Predicted gene, 36210", "gene_name": "Gm36210", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHPGSPAAPGVSEPGPRELCAFVSGASAHMLRALQPRRIRPSKRRPNHRRFLHNQICREFAKIEAATQHLALTILSQKAPAQRPPFRRPPPPPPSPFLGVACAEAPMEAPHGSPSLSPVALDTSTLDLFDDILLTPTPRPLVTPDSFCQTLPAGNPQVASDVISHALGPGDQGQPTPIQAPRFSNLLLPPQKAQGGSLEPAALGCGWVDSWEAPYACDPQGVLDSWGAL", "length": 229 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSB3-1", "protein_name": "Family with sequence similarity 236, member D", "gene_name": "Fam236d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATEGVATAHTMLTSRGPRDTREPAPPTRSWRSRFQRALARVSKFFRRGRRTARG", "length": 72 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSI2-1", "protein_name": "Family with sequence similarity 236, member C", "gene_name": "Fam236c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATAHTKENSSRGPRETREPAPCTRSWRSRFQRAVARVSKFFRRRRRST", "length": 66 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYU6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 2", "gene_name": "Zscan4-ps2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEGNVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSVPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYV3-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 1", "gene_name": "Zscan4-ps1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWAIQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYTLTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNTSCNATEGNVGERCGGNEMDSLLIIQKEQHPEHEEGNVVCRFPHGARRASQGNSSHHVDFRSALTPADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSSDNIPRKKTDSLSINKRIYHPEPEVGDIPYGVPHDSTRASQGTSTCLQESLGECFSEKDPREVPGLESRQEEPISDPVLLGKNHEANLPCESHHKRFRRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCFTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1D5P3Y4-1", "protein_name": "Large ribosomal subunit protein uL24m", "gene_name": "MRPL24", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MRLSALLRLAAPPKLPKGYRHGTWRPGTAAERLRNPPGQRRKKIFVEPISREDWKVFRGDTVQVLTGKDAGKQGMVTQVVRARNWVVVEGLNTHYRYVNRDAKYSSTYIASEAPLLLNQISLVDPEDRKPTEVDWRYTEEGERVRVSLRTGRIIPLPLWQRRDGIVPEQWIDGPKDTSVDDALDKTYTPSLKTFEEEIMDAMGIVETRRAKKSYWY", "length": 216 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5PNZ8-1", "protein_name": "ODF3A protein", "gene_name": "LOC124417034", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPATKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5RLF0-1", "protein_name": "F-box and WD-40 domain protein 27", "gene_name": "Fbxw27", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METHLPSLPLMKIFSYLDAYSLLQVAQVNKNWNALASSDVLWRKLCQKRWLFCDMVTLQLQDKETWKQFFVYRTWQEHSKTRANPRDFTYKEIPLQYGPCGYACYISGCGITRKGQDKSVVCMVNSKNTISTWDVHKSVITWVSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNILESPCKSLKAVITKDDPIVLVSDILGNLYIFRIPDLHLISTVNVLPCDIDEIYCSPQKKWVLLSKKQPYILPKVFYMSSLLRTSEFSAPVSTLLEISLCQEAFWTPRREDRLTLMSRSGCSKITKFETYDMKLEEFGNKIIVKGNSIAGFLLPYYTESLNWFGVSDKDTIVCSTEFSLLLFTNNGHRLQTFQYFSETIVRLSVDPVHVIVTCNDGSLDVYAWEERSLLLRKCYRLKNRRHLSPRGFINKTLCDDVSIIQLMIDGHDTWFLMAYALNICS", "length": 466 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1P8ASP4-1", "protein_name": "Serine/threonine-protein kinase PRP4 homolog", "gene_name": "PRP4KB", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVSDKHVESNHRKHRRSFSPSDEVFKSPKRHKSRHHHRRHGHRHHRDEEVQYNDDENVNGGDLDMEEGEILGKEGIGETLKKKLESVDEFGDIKSGQFRENNLAFNGDDGFPLICKSWIRVYNYLSYKCHGRNQRRERECEKRKEIEPDRERRKERGSVDRDSRGDREKDYLRDRDNDRGRSRDKARYSSRERGRENERERRSEKDRDKGREFQSDREKHKSLDDGYGEVRHKHSGHSRHDAEDDLELRSPTSVNGHDPNSGDVKETRGNVERTRIDNDDKGDVVVWEVEQEDEELNLIEESRRRTQAIMEKYKKKLEQQNGFSSHDLELANIPKQSSTVADVLGSGTLGPVTSAVNQAKAGLDIDAVDGEVAKLSSAVGESPAQLVISDSDRTLASTGLGEGSPKDKISDDMFTDDIFGESPADSQKMVCTLTQIIDLVFIEFSNSGFICFVFPVHHLTRYSRNGLPFVHYIFVGYLRGKGNGIPIVRSGLDDNWDDAEGYYSYQLGELLDDRYEIMATHGKGVFSTVVRAKDTKAELGEPEEVAIKIIRNNETMHKAGQTEIQILKKLAGSDPENKRHCVRFLSTFKYRNHLCLVFESLHLNLREIVKKYGRNIGIQLSGVRVYATQLFISLKHLKNCGVLHCDIKPDNMLVNEGRNTLKLCDFGSAMFAGTNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELFSGKIMFPGSTNNEMLRLHMELKGAFPKKMLRKGAFIDQHFDKDLCFYATEEDSVTRKTTKRMMVNIKPKEFGSVIKQRYKDEDSKLLVHFRDLLDRIFILDPQKRITVSQALAHPFITGK", "length": 834 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1P8BFV1-1", "protein_name": "Bax inhibitor-1 family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGLKDFSRISPAIQSHLMRVYFSLFCILAASAFGAYLHMRLNIGGTITKLGWVLSLLEHVVSCPPYKHKIRFSLLLLFGVLHGASVGPCIKSTIDIDSSILITAFLGTAVIFFCFSAVAMLARRREYIYLGGLLSSGFSLLTWLKNSDQFASATVEIQMYLGLLLFVGCIVVNTQEIIEKAHCGDMDYAVHSLILYIGFVRVFLQILSIMWNTSADRIRRNNEET", "length": 226 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1W2P6Q8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7S8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKMRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLIGGLNTPLHESDFSGVTPQQQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLHINPEDGMADHSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQATRDAERVKEMKRMHKAVQKDLPRPSEVNETILRPFDVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGFATNDSEHITYLEHSPYEKFSKEDLKKAQDALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPAQSCYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLEEDVQRQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7Z8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P855-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAIMKYRKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2PP81-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 5", "gene_name": "TAF11L5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A1Y7VLT7-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1Y7VNG9-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRHRGKNENESEKRELVFKEYGQEYAQVTKMLGCLWLEAMCFDGVKRLCHIRGKLRKKVWISTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINETDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YCH8-1", "protein_name": "Predicted gene, 47985", "gene_name": "Gm47985", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGAPHNSAKRHRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPIVLQRAWLTWQLSHAGAALHWALHTVKSILTSQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YD13-1", "protein_name": "Predicted gene 8947", "gene_name": "Gm8947", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKREQLLDKKAEDKQPPESRCNNGRSSKSSPMGKENTWPSREAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDQRSQPRSPVRTLKRSRSGDRQGAPHNYAKRRRQTFPPEASCSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYIWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 301 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YE43-1", "protein_name": "Predicted gene, 47996", "gene_name": "Gm47996", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGVPHNSAKRCRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286ZIN6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258935", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANLTSMSGFLLMGFSDDHKLQILHALLFLVIYLLALTGHLLIITITTLDHHLHSPMYYFLKHLSLLDLCFISVTVPQSIANSLMNNGYISLGQCILQVFFFIALASSEVAILTVMSYDRYVATCQPLQYETIMDPWACRQAVIAVWVTGGLSGLTHTAINLSVPLCGDRVIHQFFCDVPQMLKLACSYEFINEIAVAAFTTSTAFFCLISILLSYTRIFSAVLRIPSAQGRTKVFSTCLPHLLVVTFFLSAAGFEFLRPPSDSQSAMDFMFSIFYTVVPLTLNPVIYSLRNKAMKAALRKVLSKEEFAQRKKYFKALFQL", "length": 321 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZIP8-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259124", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "QEYKANGGDNTTTIIHFVLLGFSDFPHIRPALFVVFLVIYILTLTWNLCLIVLIRLDSHLHTPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECCLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVQVLTAIFTVFFGIINALVIMMSYVYIVISVMKITSAKGRSKAFNTCASHLTAVTLFYTSGIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 316 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZLI4-1", "protein_name": "C-C motif chemokine ligand 24", "gene_name": "CCL24", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFSPSSLIKASGQLQCPAGNRLLAPTLSSCIAALSPELPLLLSRHGRPVTVAASLLFLGLCAYSFAPADSVTMPSSCCIYFISKKIPESRVASYQLSNSSVCPQAGVIFTTRKGQKFCGDPKQLWVQKYMKKLDAKRKKASTRIRAMGTGAPVRRGPANSTSI", "length": 163 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZSE3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258059", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPKLQVLIFIFLFVAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEISFISSCIPRYLYSIATGDKVITYNACVIQVCFTDLCGVTEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSVQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZU87-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100152920", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILETMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDHYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSTVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSWRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZVC9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258401", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZWC4-1", "protein_name": "Zinc finger protein 16", "gene_name": "ZNF16", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLPLSQVPAMPSLRTRPGKAEMEPSVPGPSLRTPGTQVSVSDAPAVTHPGSALHGPLSCGDTEPGATPPHHQLADWDLRTEGSQLLQKEDASEDLESQAGTSEDYVGAGSQAPERGELCADVLGSDWGVPQGERLSLCQEGGFMPAYLLPGSPLEEPEIDTEPLERNFGLIITPVASPGEPEEETPQPFDACDQSVHCGVDLAGHEGLHAAESSFICGECGESVGLHSDLLRHRLSHRGEKPHVCAECGEAFSQSASLESHQRSHEPAKPFQCSTCGKAFGRSSSLIKHHKVHTRERPHACGECGRPFSRFSNLVKHRRVHTGEKPYRCSECGKAFSQSSSLLQHRRVHTGEKPHVCPVCGKAFSYSSVLRKHQIIHTGVKPYSCSACGKAFSHSSALIQHQGVHSGDKPYECRECGKTFGRSSNLILHQRVHTGEKPYECAECGKTFSQSSTLIQHQRIHNGLKPHECDQCGKAFNRSSNLIHHQKVHTGEKPYTCVECGKGFSQSSHLIQHQIIHTGERPYKCGECGKAFSQRSVLTQHQRVHTGEKPYDCEACGKAFSQRSKLVKHQLIHARE", "length": 576 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZX75-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100156955", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "IFIMEWENQTASSDFILMGIFSHTPTHIFLFSLVLGIFTVALLANTVMVLLICLDRRLHTPMYFLLSQLSLMDLMLICTTVPKMARNYLSGRKSISVAGCETQIFFSVSLFGAECFLLAVMAYDRYAAICYPLQYPQLMNWNVCGLLAASSWILGVFDGIVDIAATLSFSYCGSREIPQFFCDITALLRLSCTDTSTFETLVFICCVVMLLFPLSLIIISYTRVIITVIRMSSGEGRHKAFTTCSSHLVVVGMYYGAAMFIYMRPTSNRSPAQDKMVSAFYTILTPMLNPLIYSLRNKDVAKAFSRCWGREI", "length": 312 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZY56-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258501", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "METDNDTQILEFLLLGFSKQPESQPIIFGLFCSMYLITVFGNLLIILAVISDYHLHIPMYFFLSKLSFVDICFTSTTIPKMLWNIQTQSKAITYEGCITQIYFLILFAVLDILLLTVMAYDRFVAICHPLHYTVIMNPRLCGLLVLVPWIMSVLNSLLQTLMMMQLSFCTNFEIPHFFCELNQMIQLACSDTFLNTIVMYFAAALLCGGPFFGILCSYSKIVSSIYRISSAQGKYKAFSTCASHLSVVSLFYCTMLGVYLSSAAAHSSHSSATASVMYTVITPMLNPFIYSLRNKDMKRALKALFVKGPM", "length": 310 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZZP6-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHLPNYH", "length": 402 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7E2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258743", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFPDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKVACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7J9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258750", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVKEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLAFVDLCYATAITPKVLQNLMSTEKSISFIGCMVQLFVYGTFVTSDGYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSCFMGFLNACVNGSLTFQLNFCKSNKINHFFCDAPPILALSCSSIYFNIMLLAAFVGFNLMFTVSIIIFSYIFILAAILKISSAAGRKKAFSTCGSHLTAVTIFHGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMLNPLIYSLRNQDVREALKEIGKKML", "length": 309 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A951-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "LOC100514137", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVHMNVLTDALESINNSEKRGKRQVLTRLCFKVIVRFLTVMMKHGTPIGKFEIMDDPRARKIVVNLTGRLNKCGVISPRFDGQLKDLEKWQNKLLPSCQFGFIVLTTSAGIMHHEEAR", "length": 118 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ACV2-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDAPTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLIKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEDSAWNKLQFYHNPNFKRGCPNLLVRMKRRVRVKNASPVSASLLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSTSTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSVRPPGQIVMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYHRISNFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSVASLSRPNPQSSSISEHHPNYY", "length": 402 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AEV7-1", "protein_name": "Uncharacterized protein", "gene_name": "WFDC10AL", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKWWGLQWLMLSCLAILPASGNWQERISASLEALTQSKLIPGMKPCKTIPTKEQCTYFCDLPRACPTGLLCCSASCGNVCMPPKGHGNRRSSHKISNFLFTAEPIKQQ", "length": 108 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AF12-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTNTKGKRRGTRSMSSSPFRKHGVVPLATYMRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRVYNVTQHAVGTVVNKQVKGTILAKRINVHIVHIKHSKRGDNFLKRVKENDQKKKEAKEKVTWVQLKHQTAPAREAHFVRTNGKEPELLEPNP", "length": 155 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AGK9-1", "protein_name": "DM domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDPDEMPTVPCCPLDSTTGLETGAPWGIEFGPRRAIRRCARCHNHGITDQIKDQEHLCLFQACECHKCVLFSEHCSILPAESALKTMQELHLKRQLTQGLIKSGTTSPKAHSHVKKSSIQTGVLSKLPRCSADRSGIGIFVSVLDSSTLEEATNNFTFQEVTQAPCPAQQAPKTSDQDSDSASLEWQRKLEAAEALLTLRESSQAPSGPTPLLQPSAAPAPAGERGLQPPSRSLRPRPASSISLPIGHVGCISLLS", "length": 256 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AKK8-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100155397", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDVRNHSIVSEFVFLGFTNSWEIQLLLFVFSFLFYSSSMMGNLVIVFTVTLDSHLHSPMYFLLANLPAIDMVFCSITAPKMIGNIFKKHKAISFCGCITQIFFTHAAGGTEMVLLIAMAFDRYVAKCRPHHYLTIINPRICLCFLVTSWIIGLIHSMAQLFFVVDLPFCDLNVLDSFYCDLPRLLRLACTDTQELQFMVTVNSGLLSMGSFVLLIISYIFILFTIWKHASGGSSKALSTLSAHITMVVLYFGPLIFFYTWPSPTSHLDKYLAIFDAFITPFLNPVIYTLRNKEMKVAMRRLFSHLVHYRNIS", "length": 312 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AP00-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258730", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "SRHDLHCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLTGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCDHLAMVSWGVGCMAALGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSMPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTVVTSMLNPIIYSLRNKDVKAALRRTLGKKKVLAHR", "length": 322 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ARD5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258934", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLFYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AT12-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLSFNRTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQFFIIHCIFMSESGILLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIFLRSYCTVFPIIFLLKRLTFCRNNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDILLIFVSYMLILRAVFHMPSQDARHKALSTCGSHVCIIILFYGPGILTTLAQRFGRHIPAHIHILLANVCVLAPPMLNPIIYGIKTKQIQEQVAHLFLKQK", "length": 313 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AUC4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MERINKSHPEEFILLGFADRPWLELPLFIILPMYFFLTNLSFLDMCYTTSIVPQMLFHLGGSEKTISYLGCAVQLYFFHTMGGTECLLLALMSFDHYVAICKPLHYTLIMNRCTCILLVATVWLSGMTYAVSEATVTLHLPLCGHNTLDHLICEIPVLIKAPCGEKGTNELTLSVVCIFMLAVPLCFILASYASIGHAVFKIKSSEGRKKAFGTCSSHLIVVFFFYGPDISMYLQPPSSISRDLPKFMALFHGVVTPTLNPFIYTLRNKDVKGAWGNLVRSVFTSK", "length": 286 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AXC2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVNEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEMLQNFVGTEQSISFIGCMVQLLIYGAFVTSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSYLIGFLNASVHVSFILPLNFCKSNKINHFFCDAPPILALSCSSIYFNVMLLAAFVGFNLTCTVLVVIFSYIFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 281 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AY25-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100155405", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLSNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSRRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDRFFCNLPLVIELACMDTYKVEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRLSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNHHVNSWKY", "length": 311 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B1Z6-1", "protein_name": "Short stature homeobox", "gene_name": "SHOX", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEELTAFVSKSFDQKSKESSGGGGGGGGKKDSITYREVLESGLARSRELGGSDSNLQDITEGSGHCPVHLFKDHVDNDKDKLKEFGTGRAAEGIYDCKDKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTASHLDACRVAPYVNMGALRMPFQQVQAQLQLEGVAHAHPHLHPHLAAHAPYLMFPPPPFGLPIASLAESASAAAVVAAAAKSNSKNSSIADLRLKARKHAEALGL", "length": 292 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B9C9-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWRSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTECPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHHPNYH", "length": 402 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BB76-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100157512", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLGNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSHRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDSFFCDLPLVIELACMDTYKIEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRHSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNRHVNSWKY", "length": 311 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BC21-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152520", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYVAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BF45-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100513333", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPELQVLIFIFLFLAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEVSFISSCIPRYLYSIATGDKIITYNACFIQVCFTDLCGITEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSDQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BGE2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENNQSWIAEFILVGFQLSEEMELFFFIIFFLLYIFNLLANGMILGLICLDPRLHSPMYYFLTHLAVTDISYASSNLPNMLENLVKHKKTIPFVSCTLQMLFYLAFASVECLILVVMSYDRYVAICHPLQYTVIMNWKLCTVLAIISWACGFFLALVQVSLFLRLPFCGPQKVNHFFCEIRSVLKVTCGETWINKIFLFADGVFILVTPISLMLVSYVRILWAILKIQSKEGRKKAFSTCSSHLCVVGFYFGIAMMVYLVPDDSHQQEEQQKILFLFYTFFNPLLNPLVYSLRNAQVKAAFHRIFQKNRTM", "length": 311 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BIM6-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGKRSRRKSPGRQGRTCARTTRAGLSASVSHMERLLREGPYAQCLSSSARVFLAATIEYLTARVLELAGDEAQIVGRRCITPELVAMAVHNNALLSAFFGTLAISQVAPTQE", "length": 113 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BK27-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVTEFIFLGLSNSQELQTFLFVFFLVFYVGIVFGNLLIVLTVMIADFFRKCKVISFKGCLAQIFLLHFFGGSELVILIAMAFDRYVAICKPLRYTTIMSSNVCVGIVAAAWGTGFLHSVSQLAFAVNLTFCGPNEVDSFYCDLPRVIKLSCTDTYRLDIMVIANSGVLTVCSFVLLIISYTVILVTIQHLPSQKSSKALSTLTAHITVVLLFFGPCIFIYAWPFPIKSLDKFLAVFYSVVTPLLNPIIYTLRNKDMKTAMKRLRKWNMNSRIKP", "length": 274 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKA6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259008", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTFNCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLMGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCVHLAMVSWGVGCMVGLGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSIPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTMVTSMLNPIIYSLRNKEVKVALRRTVGKKKVLAHR", "length": 320 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKW4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258932", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILVTMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSTIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSLRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BLZ6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258167", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGGKNSTTITKFILLGFSEFPKLTAVLFSVFLRISLMTVSWNMGLIMLIRMDSHLHTPMYFFLSNLSLLDICYVSTIAPRMLSDFFKKYKFISFMGCTMQYFFSSLALTECCLLAAMAYDHYAAICNPLLYTAIMSPTLCVQMVAGSCVTGFFGSFIQLCALFQLHFCGQNVTNHFFCDLPQLLILSCSDTFFFQVMTSVLTVIFGLTSVLVIIISYGYIIATILKITSSEGRSKAFNTRASHLTAVTLFFGSGIFIYMYPNSGDSLSQNKLVSVLYTVIISMLDPLIYSLRNKEIQDSLSRWRKTIFSWCY", "length": 313 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BNL4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "TVLNARNVSTPKVFILLGFSDHPWLEMPLFIIVLAAYIRTLVGNISIIVVSRVDPNLDSPMYFFLSNLSFLDLCFTTTTIPQLLLNLWGPDKSISYGGCVTQFYMFHFWGATECIFLAVMSMDLQAICKPLRYPVIMHQQLCIFLVVMAWLSGLVNSLLQSSLTIQLPLCGNNKVDDFLCEVPVMIKMSCTDTTFNVAMLSIVGTFYSLVPLSLILVSYGFIVATVLRIQSSEGKKKAFNTCSSHTIAVSLFYGPVISMYVQPSAANSQDKNKLMSLFYSLVTPMLNPFIYTLRNKDMKGAMMRLLVSLYHQRRG", "length": 315 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BSD4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100525471", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENENSTVVAEFIFVGLTQSRNIQLLVFVLILIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNLRACYALLVALWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLMTLLCFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPAIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKRLLNQQLA", "length": 307 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A2R8VHJ9-1", "protein_name": "Predicted gene, 36245", "gene_name": "Gm36245", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSTKNEEQNEDQSEGVVIPHIQDHHCLAILAFCFFFPLGYLAYRSSCKTRTYIEQKEYEKAKATSRCTFAFVLSSIAGGSIIFFCLFSRLFFM", "length": 93 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A3L7ICH5-1", "protein_name": "Cytochrome c oxidase subunit 7A2-like, mitochondrial", "gene_name": "LOC100756118", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYYKFSGFTHKLAGAWALESYSPQGLKPVASTEAPPIVFATPTKLTSSVTAYVYAGKNKVPELQKFFQNFFHLKRGLPDQMLYRTPMALTVGGTIYCLSALYMASQTPNK", "length": 110 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A3Q1LL21-1", "protein_name": "BTB domain-containing protein", "gene_name": "LOC112445444", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGPLNSRNLQCRESGTGELQQPEAQAGPSYVSGSRKRKQSTGPSLGPESEMSHNQEEDLQQVVCTRQGKKVKIKSEYAYQTLFLNGETSDIKIRALGKVWCLHKRFLCQSDYFATMFRDSGKECHKDIIDLEINDQNINVESLQFVLGSLYRNEYVLIKPLQVPRVLATACLLQVEDLIQQCDKTMKETINVKTVCSFYVAAETYGLHSVKTGCFEWLLHNLMTHPSVELYKKLSTDLMNLVISSSNLFVMQKEIDIYTTLKQWMFLRLNPGWKGTMKQLLVNANNWFSRHKEHDGSISFLETKQGIVFQPVFKNLRFQHIICDLASTKVIEQDALIPSEWLSCVYKRQWYTLLRAQQYREIGPRDITETELEEYSMRCGKRIVRDGTYAWKWSGYNFGVHLYVVFTSHFIIFKRHAFSQPYDGSICLQPQRNIAFRLTLVYFGSSGKLSFRKTTGYKILTFEKDEEQMVMKLDSVALSFPLYIFCNFLFISLENPGN", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LLV6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIIIGTLITGYMVTCTCFLHYSCDSEEAHKATKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LUU6-1", "protein_name": "Guanylyl cyclase domain containing 1", "gene_name": "GUCD1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTGPRCRRKQRPSGRPGPRGTRAPQHPTPDAGWTARRAAGAAGAEARGRDLPPQRKPAKPTAPGKGRPERGECPRRADRGGGDPEERAGGRPAWGPGAGRGGAWGRSRLPPLLPPGRWCWRPGKPARAGRALSSPVDARAAAGAGPGPWEPRAARVMRTEVDAEAAGPPLEPDEPTQSLSIQDQETAFLLEDSCQLKPGQPLPGRPWPSGDFVQLPVPIIQQLYHWDCGLACSRMVLRYLGQLDDAEFEQALQELRLTRSIWTIDLAYLMRRFGVRHRFCTQTLGVDKGYRSQSFYRKHFDTEETRVNQLFAQAKTCKVLVEKCRVSVQDIQAHLAQGHVAIVLVNSGVLRCDLCSSPPKYCCFTPSGPRCFCRSPDYQGHFIVLRGYSRAAGCVFYNNPAYADRMCSASISNFEEARTSYGTDEDILFVYADS", "length": 434 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1M0W3-1", "protein_name": "IF rod domain-containing protein", "gene_name": "LOC787600", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTCGSACFSSRSGVRSSSSCVTTQRYAPGRTFSCVSACGPRPSRCCITAAPYRGVSCYRGLTGGFSSRSVCGGSRAGSSSRSFGYRSGGPSPPCITSVSVNQSLLKPLNLEIDPNAQRIKHQEKEQIKSLNSKFAAFIDKVCFLEQQNKLLETKWKFYQNQRCCESNLEPLFNGYIETLRREAERVEADTGRLASELNSLQEVLQGYKKKYEEEVALKTTAENEFVKIKQEVNRAYVLKGDLEANAHSLVEEVGFLKTLYEEELRVMQAHISDTSVVVKMDNSRYLNMDSIVAEIKAHYDEIASRSRAEAESWYRSKYEEIKATVIRHGETLRRTKEEINELNRLIQRLTAEIENAKSQNSKLEAAVTQAEQQGEAALNDARGKLAGLEKTLQKAKQDMACLLKEYQEVMSAKLGLDIEIATYRRLLEGEEQRLCEGISAVNVRVSSSRGGVVCGDLSATRTCGIGSYGVGACGSSCKKC", "length": 480 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MFB0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112441459", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELWRRLLIIVIGTLITGYMVTCTCLLHYSCDSEEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKSTWPPSLQCRVKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVTLFSRELKHFYKSYKKKQPIYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDMFKNSQNN", "length": 361 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MI36-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGSSSGSKAEFIVGGKYKLVRKIRSGSFGDMYLAINITNGEEVAVKLESQKARHPQLLYESKLCKILQGEVGIPHIRWYGQQKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMMGRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASISAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRHLFHILFRTLNHQYDYTSDWTMLKQKAAQQAASSSGQGQQAQTPTGF", "length": 325 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MQ28-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "KEQVLQPTTVVSLEGAVAEISCNHSVSDVYDFFWYLHFPGFAPRLLIKGLGPSQQGRYNMTYERFSSSLLILQVQTADAGVYYCALRYTEAGHP", "length": 94 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MT47-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112444909", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLGCEGGKRPLKPPKKQAKETDEEGKAFKHKQKEEQKTLEGLKGQIMGKVPLATGGIKESGKQ", "length": 63 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MUP8-1", "protein_name": "E3 ubiquitin-protein ligase", "gene_name": "LOC100336539", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSRLTERALPTGTSNGAPSSRRAPVLTGTTVSNNDLASLFECPVCFEYVLPPITQCKSGHLVCGNCRPKLTRCPTCRVPLTSIRNLAMEKVANLVLFPCKYTSSGCGKTMPPTEKADHEEHCEFRPCRCPCPGTSCGWQGSMDAVVPHLMQHYNESIITLRGEVVVFLAVNINLAGTLEWVMLQSCFGFHFLLVLEKLEIYDGHQKFFAVVQLIGTREQAENFTYQLELNGNRRRLSWEATPLSIHEGIATALINSDCLIFDSEVAELFAENGNLSIDVTISMC", "length": 284 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q2TUK0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC121109925", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDEKGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A3Q2UEY0-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418381", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSSYTIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A494C0N9-1", "protein_name": "Protein FAM246B", "gene_name": "FAM246B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATPGRPWAQARSAYRASEVLRRVTGRRRDPGPQSNGPGREDARAPGRLARLLRQLRAEAASRSEVPRLLKLVERAGAGAAGAGERTGAHSRGSVCSVCGEPRGRATYPAGVLEVSERRLQEGLAAVREELGAEIEALRAELRAELDALRALLPPPPPSPPARREPRAVPRAAPRGPTLLRTLGTVSALVAASRPADDAPDGPAECGAHRAPARKNHKKMPVPPGAPQGGGD", "length": 232 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A494C0Z2-1", "protein_name": "Speedy protein E13", "gene_name": "SPDYE13", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A4X1TRA8-1", "protein_name": "Small ribosomal subunit protein eS19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGVTVKDVNQQEVVRALAAFLRKSGKLKVPEWVDTVKLVKHKELAPYDENWFYTRAASTPRHLYLWGIAGVGSMTKTYRGHQRDRVMPSHFSRGSKSVAHRLLQAREGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAAKKKH", "length": 145 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1TY10-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100627324", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENYNQTSIYFILLGLFPSSRIGMFLFIIIVLIFLIALFGNFSMILLIFLDNNLHTPMYFLLSQLSLMDLTYISTIVPKMAYNFLFNDKSISFIGCGIQSFFFLTLAGAEGLLLAAMAYDRFVAICFPLHYHIRVSKRICVLMIIGSWIMGSINSFAHTAYALNIPYCQSRAINHFFCDVPAMLTLACIDTWVYESTVFVSTTIFLLVPFTCIAFSYGRILLVVHHMNSTEGKKKAYSTCSTHLTVITLYSAPFAYTYLRPKFLRTPTEDKVLAMLYTIFTPMLNPIIYSLRNKEVMGALRRVIQRICSVKM", "length": 312 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1U699-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSVSMSKFVLVGLHIWPEQQGMVFALFLGMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLAFSDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFFSCIDNLLLAVMAYDRYVAICHPLRYAIIMKEELCLCLLAGSWLLSCAYALTHTLLLAQLSFCADNIIPHFFCDLASLIKLSCSDTSLNELVIFSLGPAVFIFPLSGILVSYGCIVVSILSVHSPKGIFKALSTCGSHLSVVSLFYGTSMAVYLSSSSGQSHDKDTIASIMYTVVTPLLNPFIYSLRNRDMTLALQILFRNSNLLAK", "length": 315 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1VK25-1", "protein_name": "Elongin-C", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RSYGGCEGPDASYGKLIASDKFIVKREHVLTSGAIKAMFSSPGQFAEKETDVVNFRETPSGIPSAALWKVCMYLPHKVCYTSNTSEIPEFPINSEFPIAPDIALEPLMAANLLDC", "length": 115 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A571BD55-1", "protein_name": "BTB domain containing 35, family member 26", "gene_name": "Btbd35f26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BF50-1", "protein_name": "WD repeat domain 88", "gene_name": "Wdr88", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTKDNEEILNSPDQVRKGSPDVKKKKKIKKKRVKPKGDLDSKKLDFVEDSWWKGSLKNKNLDFAEYNWVLVDNRRVSVDSRKSSADSKRGSADSKRGSADSKRGSADSKRGSADSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKNRFSPKKMDFSEDREISQPTFLRAQQSKVPWALMRALGLFKLSLPDIRRYYNLTSHDPLALDKDRQPREKSHMATVKKFWGNQQPLSKIPYKILIGHDHIVSSCHFCMNDTRFLSSSYDCSVKLWDAEDGTVIWDFEPRPKAPVLECSITADNRRIVASSYDKTVRAWDVETGQLLWKVRHDTFVVCCKFSPNGKFVLSALDVDRGIYLMDPENITTVIHMKDHHQRSITSCCFDPDSQKVASVSMDRCIKIWDITSRTTLFTIPKAHYNAISDCCFTSTGHFLCTSSWDKNIKIWNVHTGEFRNRGACVTLMKGHEGCVSSCCIARDSSFLISGGFDKTVAIWDVGGGYRKLALKGHEDWVTDVAISNNKKWILSASKDSSMRLWNIEEIDKIPLVSENKKAMGLKVRQVGIR", "length": 565 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG45-1", "protein_name": "BTB domain containing 35, family member 25", "gene_name": "Btbd35f25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGLQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG86-1", "protein_name": "BTB domain containing 35, family member 8", "gene_name": "Btbd35f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESRHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A5G2QIN7-1", "protein_name": "ADAM metallopeptidase domain 7", "gene_name": "ADAM7", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSNSHYLSALFSREFLASNYSETYYSTKGEEVTTHPQIMDHCFYQGSIIHEFDSAASISTCSGLRGFFRVNDQRYLIEPVKYSDEGEHLVFRYNPKVQHAANYSCTELNFTRTAVLKDNTKSMEDSKMESIEKEKHIELFIVADNNVYHRNPNSKVRNRVWGMVNFVNMIYKTLDIHVTLVGLETWTNGDKIEIDSNIETTLKRFSAWQEIILKKKKNFDHVVLLSGKWLYTSAQGTSYPGGMCLPYYSSSVVKDLLPDLNTIASRMAHQLGHSLGMKHDDYPCTCTLGKCVMDSGGSIPALKFSKCSRTQYQQYLKDFKPTCMFDIPFSDKLSDYPYCGNKKLDDGEECDCGPVQECTNPCCDARKCMLKPEFTCAEGECCESCQVKKAGSLCRPAKDECDFPETCTGHSPACPKDQFQVNGFPCKDAKGYCFMGNCPTRDDQCSELFDNEAKDSSDICYKMNKNGNKFGYCKNEEQTLIPCEEKDVKCGKIFCTGGKHASILGEEKVYHLKKPLTQNVTECKTFFLYHKSKDFGLVAPGTKCGEGKVCSNSECVTIEKAYNSTDCPSPCNENAVEDGDLGCQCEGVQASVDWEETLNVTNISILVVVLILVIIGVLSAVLLIRYQKCIKLKQVQRPPSEALGVENKGYTGDEQQTRTEPILPDIHPLHRRTAESLARLPTSFSSPHYITLKPASKEPRGTADPNPSAKVSLKLDIQNGCASLS", "length": 725 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QM02-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100623139", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTGGENTTNITAFVLLGFSDFPHIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHIPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYVVFSTMGLSECGLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVRVLTAVFTVIFGIINALVIMMSYVYIVISIMKITSAKGWSKAFNTCASHLTAVTLFYTSGIFVNLNSSSGGSSGLDRFAAVFYTLVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 312 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QUE5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524011", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSNVSKFLLLGLPIQQEQQGMFFALFLGVYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFASVTVPKMLMNMQAQDHSISYAGCVTQTYFFMFFACIDNLLLTVMAYDRYVAICHPLRYTIIMREELCICLLAGCWLLSCAYALTHTLLLAQLSFCVDNIIPNFFCDLAALLQLSCSDTSLNELVIYTSGAAVFIFPPSGILVSYGRIGISILRVPSTKGICKALSTCGSHLSVVSLFYGTIMALYFSPSFGQSHYKGIIASVMYTVVTPMLNPFIYSLRNRDMTLALEILIRNKNLFTT", "length": 313 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QWK6-1", "protein_name": "Calmodulin 3", "gene_name": "CALM3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VSAEREEEGVALKFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVTASPVLGPAREGPRASAPSWGGKQPLAIACNQPRRSSGFSWDLPSFENLLSSTLWSPASGDGRGVEHSGRPS", "length": 214 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2R7Y6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524140", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLVAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINHLSGTKSISFVGCATQYFLFLSLGGAECLLLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIVLISASYVFILHSVIHMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2RGH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524855", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGRRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYTVLMNRKVGQMMAVTSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYETAVYISDIVLLLLPIILISASYIFILHSVIRMHSAGSKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALRRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A668KLA6-1", "protein_name": "Predicted gene, 52955", "gene_name": "Gm52955", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMGALLANSPLLLCWLVFGAQLSVGEGILLTLTLMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKQCGVFFFALNLALFGIFAFAQCFNPLVYGLHNRDLQSKLYPSLCCQKKLLP", "length": 296 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KLA7-1", "protein_name": "Predicted gene 7582", "gene_name": "Gm7582", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMWALLANSPLLLCWLVFGAQLSVGEGILLTLTFMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKRCGVFFFALNLALFGIFAFAQCFNPLFYGLHNRDVQSKLYPFLCCRKKLLP", "length": 296 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KM50-1", "protein_name": "RIKEN cDNA A930007A09 gene", "gene_name": "A930007A09Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSLSELPQKNTDLAEMQSGPLGRCSHFFWLGVAFDAVGVAVLFTGVFANLLFYDMLLYLGSIIIFVSLLWWISWYTGNIEALPEDPLRGTSPRESGVHRSGSRRFSLTLRSVSDTFQRIRRRRRRRLHPRVVQRISSISSTDPGQLERNCDARTSGGRALFRSAKPEAVLNQFSRVQTSKSLPLGIVHTGLSICTSRSQPVFSVTSQTYPLASDSNSQMAMSSDSHVYLDSHSQEHSKISVASQIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASQIYPLEQEESQSHFLVPMPSDSFPVVPMTSQSQIQGSLAQQSHLQNLPLASQTPETDKASKSHTLAKGVPGVPPGSAQTQHPQASLAQTSQISSPVRKVPKN", "length": 636 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A8C2LDI6-1", "protein_name": "Large ribosomal subunit protein eL33", "gene_name": "LOC100774916", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRLWCKAIFAGYKRGLCKQRGHTALLKIEGVYARAETEFYLGKRYAYVYKEKNNTVTLRCKPNKARVIWGKVTKAHGNSGMVHAKFRSNLPAKVIGHRIRVVLYPSRI", "length": 110 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LMV8-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC100755948", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTNTEGKRRGTRYMFSRPFRKSEVVPLAMYMRIYKKGDIVDIKGMDTVQKGMPHKCYHGKTGRVYNVTKHAVGIIVNKQVKGKILAKRINVQMKHIKHSKSRDSFLKQVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPQLLEPISYEFMA", "length": 160 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LSR6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "LOC100751955", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSQDEGEKENPMWELHICKLCLSICVEESRDRLTRAAKVLEQLKGETPVFSKARYTMRSFGIRSNEKIAVQCTVHGTKTEEILEKGLKVQEYELWRNNFTDTGNFGFEIQEHIDLAIKYDPSIRIHGLDFYVVLGRPGFTIADKHRTGCIGAKHRISKEEAMRWFQHKYDGIILPGK", "length": 177 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LUM6-1", "protein_name": "Tubulin alpha-1C chain-like", "gene_name": "LOC100757824", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MCECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETDTGKHIPRVVFVDLEPTAIDEVRTGTYRQLFHPEQLITGNEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSRFTSLLMEWLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYPTPLPE", "length": 288 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LZU4-1", "protein_name": "Glia maturation factor", "gene_name": "Gmfg", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSDSLAVCEVDPELKEKLRKFRFRKETDNAAIIMKVDKARQMVVLEEEIQNVSPEELRLELPERQPRFVIYSYKYLHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRATDDLTEAWLQEKLAFFG", "length": 142 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2M625-1", "protein_name": "U3 small nucleolar RNA-associated protein 15 homolog", "gene_name": "LOC100755487", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAGYKPVAIQTYPVLGEKITQDTLYWNNYKTPVQIKEFGAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEIQTFREHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNKNVLCVEHGQPVESVLLFPSGGLLVSSGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAASILSLALSHEDETIVVGMTNGILSVKHRKSEAKKESLSRRRRPAYRTFVKGKIYMKQRDDIMINRPAKKHLEWYDKDLKSFRISKALDRVLEPNCVIKTPEVTVSIIKELNRRGVLANALAGRDEKEITRVLNFLIRNLSQPRFAPVLINAAEIVIDIYLPVIGQSPVVDKKFIVLQGLVEKEIDYQRELLETLGMMDMLFATMSRNDSVSLSENVPAELPEKTESPCQPGDTDKNS", "length": 527 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2MXE3-1", "protein_name": "Glycerol-3-phosphate acyltransferase 1, mitochondrial", "gene_name": "Gpam", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDESSVTLGTIDVSYLPNSSEYSLGRCKHATEDWGDCGFKTTFFRSATLKWKESLMSRKRPFVGRCCYSCTPQSWERFFNPSIPSLGLRNVIYINETHTRHRGWLARRLSYILFVQERDVHKGMFATSVTENVLNSSRVQEAIAEVAAEMNPDGSAQQQSKAIQKVKKKARKILQEMVATVSPGMIRLTGWVLLKLFNSFFWNIQIHKGQLEMVKAATETNLPLLFLPVHRSHIDYLLLTFILFCHNIKAPYIASGNNLNIPIFSTLIHKLGGFFIRRRLDETPDGRKDVLYRALLHGHVVELLRQQQFLEIFLEGTRSRSGKTSCARAGLLSVVVDTLSSNTIPDILVIPVGISYDRIIEGHYNGEQLGKPKKNESLWSVARGVIRMLRKNYGYVRVDFAQPFSLKEYLESQSQKPTSAPLSLEQALLPAILPARPNDAAESEDTSSNEPRNTADEAFRRRLIANLGEHILFTASKSCAIMSTHIVACLLLYRHRQGIHLSTLVEDFFVMKEEVLARDFDLGFSGNSEDVVMHAIQLLGNCVTITHTSRKDEFFITPSTTVPSVFELNFYSNGVLHVFIMEAIIACSLYAVLNKRGSGASAGGPGSFISQEQLVRKAASLCYLLSNEGTISLPCQTFHQVCHETVGKFIQYGVLTVAEQDDQEDVSPGLAEQHWDKKLPEPLNWRSDEEDEDSDFGEEQRDCYLKVSQSKEHQQFITFLQRLLGPLLEAYSSAAIFVHNFSGPVPETEYLQKLHRYLITRTERNVAVYAESATYCLVKNAVKMFKDIGVFKETKRKRVSVLELSGTFLPQCNRQKLLEYILSFVVL", "length": 827 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8D1BQI2-1", "protein_name": "Uncharacterized protein", "gene_name": "LCE5A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSCQQNQQQCQPPPKSLPKYSTPKFPGPCPPLVSSCCGSRSGHGRCYSSGGGGCCLSHHRRRRYHPCQPQSSNCCDSGGGQQSGGSGCSHSSGGSGCCSGGCC", "length": 103 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8D1VKI8-1", "protein_name": "Uncharacterized protein", "gene_name": "NCR3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARMLLLILIRVHSGSCALWVSQPPEICTQEGTPAFLPVPSTPARGDWPLALSHGTGTNWPQGRRVVVLGQGVRTGNGTPLVVERGPAQLATPTIFLLRAGFYAFGFLSVAIGSTIYYQGKCHRHMGTHCRSADGL", "length": 136 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8I5XVN6-1", "protein_name": "SPATA31 domain-containing protein", "gene_name": "LOC689526", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MESFLLLMNSAIESWMNTSTMDIATDLSIAILCGVGLFFLLIPFLKDCPLSPASGNKTDIPKDVKRGRSNTRRKTDVEKGCRDGGKTVEETKTPSQPMKILTRQLLQDSTPQIFWNSSQKLDHLLLSQLFSSLTSLEDLILQKFNRRFWGTSSIFSESVVAMAHVLRNPSFPQQKSVRFSDPCVTDQAPSQAQGLRQQHRYHPRLHRQRKTSLVGMTWVPEKKILPISTPKQIHPCLKRRAYGVSCPTTEKGIQTSLPPECLSHKHGLYSKAVKGYVKRNHQKAIGKPPGNWLRDTLKTKAIRPASILSEHLRMFLHHKEPQTKDKATNVEKQQGTCIRSPPSKKLKQFQGRFPPNTDHYCKRRPQLSQPGQPSILNSKSYKLRKIIQSVLAGMTLMKDRADFSMQSQFSQAPQSSVCNAKRYKYSKRMGSVPRRVPLKKDTARYDMGKPIKKCLGAGTKNVPHSACSILGKRLRARNLALKKGQASVMNPTGNYCLHDSKAEMKLASNNTALPVQCRRTPYLQILEALNPIPPGVLASKLPRIVFPSSPICDFKEEYYSKAATVLKNLHHQDPGGTRVKSTSAASLESALSMCSAAKIQKTQRAPPPAASRGLSKAHTDLLKRHLSIQHSALYFEQGRIIQGTGKGSLQQNTNPQKAKHAPLKSFHEGDSRHHSWNGTMVGPGKRVPPAAAKQTKAVEVKKETPYAWSLGSNESHTGKDINISPRVFGSLGAKRSPGHLQTCTPQHSQDSTLRTQGHRNIILCSNKQPQPRPGRHDPECPSTVHPAKVNLSSEHSMSSFQNTCQKPKTAQGSCERADTKENRVLKDKIRINHLKDLCPHKERQGSIRPTAISQGGRLGRSRPCSLSSTQLKDTAKTRTSDKRQATSKSSWKSDIREVLKYGYVGSKDIIGQEDTSKKDQPPAVTERTEEDWTGEKAMCNMIAHLQYLTNFLFEIMEDTEWDPSKLQGCEVESLTFQLGSSSDSSEGDDDINQGTSTSTMSFGQTSPEMHNCSFTKTGIGDKTQSEIKAKTACDQHLNQVNRGMFSDQLPMPKEYDLSCRYRGIQHQQELGLPDQTFYQYKLRMTHCPHGGTKGHNYSFGYRKLGDQQQPDFTHKALDPHQSAKEDMGCVSCLSPKGSRPVKHRRTDCFSP", "length": 1151 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5XWP3-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "ENSRNOG00000063695", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQRDMCHMTPYRLLCVLVALALSGCNVAQEVTQVQSTASRQEGEEVTLDCSYETSYVAYYLSWYKQHLSGDIIFLIHQISSSTAEERSGRYSLVFQKSLKSISLVISASQPEDSGKYFCALSDLTQC", "length": 127 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y4M0-1", "protein_name": "Large ribosomal subunit protein uL14", "gene_name": "LOC108350588", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQRRGGSSGAKFRISLGLQVGAVINRADSTGTKNVYIISVKEIKGRLDRLPAAGVGHMVMATVQKSRPQLRKKVHPAMVIRQQKSCGRKDGVSLYFEEDAEVIVNNKGKMKGSAITGPIAKEHADSWPRIASNAGSTA", "length": 140 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y5C9-1", "protein_name": "Ribosomal protein L32 like 2", "gene_name": "Rpl32l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALRPLMKPKIIQKRTKKFIRHQSDRYVKIKRNWRKPRGINNRVRRRFKGQILVPNIGYGNNKKTKHMLPSCFRKFLVHNVKELEVLLMCSKSYCAEIAHNVSSKNRKAILERAAQLAIRVTNPNDRLCSKENE", "length": 135 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y6V7-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "Pate4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNTEPLFDIVINCPIAPQFILKILLFPYPANTNLICNTCNRSENSECKNGTGQCTAPEGGSCSTISIYHGQRHVLSKQMCLGHCEEKPHYNGDFMIYVMCCSKNLCNSF", "length": 110 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y7P1-1", "protein_name": "Heterogeneous nuclear ribonucleoproteins A2/B1", "gene_name": "ENSRNOG00000069815", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEREKEQFCKLFLGGLSFETTGESLRNYYERWGKLTDCVVMRDPASKRSRGFGFVTFSSMARPHSIDGRVVEPKRAVAREESGDPGAHVTVKKLFVVGIKEDTEVHHFRDYFEEYGKIDTTEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSGQEMQKAQSSRSGRGGNFGFGNSRDGGGNFGPGQGSNFRRGSGGWESSDGYGSGRGFGDGYNGYGGGTGGGNFGGSPGYGEGRGGYGGGGPGYGNQDGSYRGGYDNYGGGNYGKGNYNDFGNHNQQPSNCGPMKSGNFGGSRNMGGPRDEHRSFPSWKGYNGVFGKQSPLTWIKTHSL", "length": 347 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZKP8-1", "protein_name": "Glycerol-3-phosphate dehydrogenase [NAD(+)]", "gene_name": "Gpd1l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGATTLRVCIVGFWSWGSAIAKIIGTNVKNQQKFASTVKMWVSEEAVNGRKLTDIINHYHENVKYLPGHKLPENVVAVANLSEAVQDADLLVFTTPHQFIHKICNEITGRVPKKALGIIHMESIDEGPRGLMLISDIIREKIGMDVSVLMGANTAREVAAGEFCETTIGSKVIQNGILFKELLQTSNFCITVVDDADAVELCGALKHIVAMGTNFCNGLHCGNNSKAAVLRLGLVEMITFTRIFCKSQVSTTTFLESCGFANPITICYRGSDCKEAKTFPRIGKTMGNLQKEVLNGQTLQGLKTSALVYQFLKQKGLLAKFPLFVTVYRICYEGRPSTEILTCLQNHPAHM", "length": 351 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZL63-1", "protein_name": "Ankyrin repeat domain 13a", "gene_name": "Ankrd13a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSDQSRKAAAEGGSSPMVWSRPARAPPGGRADGRGPIVERTTGEGRAGDESRRARTVGFVRGDLGLPKGPAVPQNGGGRVSRRGGLVGRHGAGLGPFRKSGPPPRSVMERLAYFPVRGGSAGSSRFASCQRGRERAGRGVGAAERVPEPVPSPARDPGPPAPPAPDSEALVVRCARHLAARRSPPLALRPVGRAPETPSGGSRLVAGGRSGLGGDLLAMSSARDTSSRFPLHLLVWNNDYRQLEKELRDQNAEALDPRGRTLLHLAVSLGHLESARVLLRHKADVTKENGQGWTVLHEAVSTGDPEMVYTVLQHRDYHNTSMALEGVPELLHKILEAPDFYVQMKWEFTSWVPLVSRICPNDVCRIWKSGAKLRVDITLLGFENMSWIRGRRSLIFKGGDNWAELMEVNHDDRVVTTEHFDLSQEMERLTLDLMKPKSREVERRLTSPVINTSLDTKNVAFERTKSGFWGWRTDKAEVVNGYEAKVYSVNNVSVITKIRTEHLTEEEKKRYKEDRNPLESLLGTVEHQFGAQGQDLTTECATVNNPTAITPDEYFDEDFDLKDRDIGRPKELTIRTQKFKATLWMCEEFPLSLVEQVIPIIDLMARTSAHFARLRDFIKLDFPPGFPVKIEIPLFHVLNARITFGNVNGCSTAEERQSVEGTQAECAASDATNFEVDQSVFEIPESYHVQDNGRNVHLQDEDYEIMQFAIQQSLLESSRSQDLSGPASNGGVSHAHSYEAQYERAIQESLLTNMEGRCPGGLSDSSRFDSDLRLAMELSAKELAEQELRLQEEEAELQQVLQLSLTEK", "length": 809 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZP24-1", "protein_name": "Large ribosomal subunit protein uL30", "gene_name": "ENSRNOG00000064315", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAVPEKEKKVAAVPGTLKKKKVPAVPETLKKKRRNFSELKVRRLRKKFALKTLRKARRKLICEKAKHYHKECRQMYLTEIRMARMARKAGNVYVSAEPTLAFVIRIRGISGVSPKVREVLQLLRLRQILNGTFVKLSKASVKMLRIVEPYIAWGYPNLKSVNELIYKRGYGKIRKKRIALTDNSLMARSLGKFGIICMEDLIHEIYTVGKHFKEANNFLWPLKLSSPRGGMKKKTTHFVEGGDAGNRETR", "length": 251 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZPV0-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ENSRNOG00000066253", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIVQRIFRLSSVLPSAVSVHLRSNPGVTAVAFNKEPDPVQKLFVDKIREYKTKRQVSGGPVDTGPEYHQDLDREPFKLKQLYGKGEMDKFPTFKFEDPKFVVIDKPQS", "length": 108 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZRI3-1", "protein_name": "Natural killer cell cytotoxicity receptor 3 ligand 1", "gene_name": "Ncr3lg1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASQSCQRGPENAHMHPKGPCCSALCFLCSLGSSPHGSSLGPLRKCGRRSKPVQSSPEGSRVAEWPDGLLSLLLLLWSLLPSAGGLELEMAGTTQIVFLHEDVTIPCKILGSLHLDLSIVGVIWSLKKDGDESEVFKFYGDQLEAVRPGANVSLLGLEHGDASLYLPRFELWEAGEYQCKVVVTPEKKEGTTRLEVVAHPNMSLSEKPATARGGKEKLIICQLDGFYPEALDIKWMGSALKDSHFQEITEGVVTGPTVKNDDGTFSVTSSLALKPALEDHMYQCVVWHRSWLMPQSLNVTVFENTRDSTHGTVPPTAEVGPPVSEPRSVMIYVTIIGLCILLFSVIVCGLWKWKRLTTSNTGLCLRLDVRC", "length": 371 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZS91-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134482834", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPTETEEELPTPTPKPSISEEGNFHSQYQVLGTSGQGGNGKVLLAHNRLTGTPVAVKVLRKDKQWFQPAMMEANIMRKINHPNIVSLIQVIEKETRIYLIMELVEGQELYQYIRESGHIEEDEARQIFEQILSAVSYCHGKGIVHRDLKLDNIMIDKNKKVKVIDFGLSTQFPPGKMLNHHCGTHSFGSSELLLGHRYDRPKNDMWIIGVVLYCMVVGKLTFDSVIIQDLQRQVVAGVYPAPCGVSKELEDLLSKLLRVNPNFRPTARKAMKHPWFKEHWNGLIVPYEELLPLTPDPAILDAMKSIGLQASVVKHTLKQRKYNEEMATYFFLQKQALQGDGCTAQAQQVSPVAAPFPSLDPAAAFRLEPKRSGSLPVLGTLRVSSSHGHVSHYGQNAHPKGGKRYTVAGRLRPLPMTPTQDHYHKCAVSVPCIQTTSIFSEKSSNKKIKEDNPLSHRAPLEDKPIPSRVRHRGFKGWTRNIANALIKLCCCMPRRKKPRLGQNRISPQK", "length": 509 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZT61-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134479845", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVAFFLGQGSYGSVKLAWHRRTQALVAIKTVEISKNTIRAILSEMTTLELLHHPNIISLFQILVTANQIHFILQYAPGGNLVQLISEEGPLPEEKAKKMFGQIVSAIRHCHSLDIVHRDIKPQNILIDGEGNVKLIDFGLAVKCRPGTLLSRHCGTRGFNAPELVLRQPYDGKSSDVWSLGVLLYFITTGYFPFRGNTIDEIEQKITTGTYTVPHHLSGQLENLIHQIFTVSPEMRPSIEEIENHPWIKKCELKIPPMSDPDYKIIEMLCGMGYNAKDILESLQKKRYDEPMGAYLSLKNHVSEGYDLASITPTKPGDPCPPPPPSPAHPSVFGLPLRRRASEPNFGLLHRQPSREQNPLDLILSGLNMGRCVSMPPIAVYYPKKQRSTSTRALHSRPVASPCVYNNMLGVEIILPHKQDIEMNTSSPPQTMGWFKRLRKGIGDCFSRLCCFPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZXB5-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb2l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLSSLPGRNLAMARLLLLLLSAACLHTGNSAGYQEKNDFGVDQPDVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKHYHGEFIYTSTRPFIHEHFKGRLIMNWTPGQTSGVLRILNLKENDQATYFSSVFLQTPEGMKLWQSIPGTKLIIHALDTTMRSPSIIPSVVPTDDLEYTQGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZY57-1", "protein_name": "40S ribosomal protein S26", "gene_name": "LOC134478821", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSPGPRRPRQEAGSKPRELQQRVLASVKRRCLFSSLGSNTTKKKRNNGRAKKGHGHVQPIRCTNCARCVPKDKAIKMFVIRNILEAAAVRGISEANVFDAYVPPKLYLKLHYCVSCAIHSKVVGNRSCEARKDQTPPPRFRPSGAAPQPPPKPM", "length": 154 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYE5-1", "protein_name": "Oligosaccharyltransferase complex subunit", "gene_name": "Ostcl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METKHSALLRTFPFLVLECPNLKLKKPPWVHMLLAMTMYALVVVSYFFITGGIIYDVSIEPPSVDSMTDEHGHQRPVAFLARRVNGQYIMEGLASSFLFTMGGLGFIILDRSNTPNIPKLSGFLLLFDFVCVLLSFFIARVFMRMKLPDCLMG", "length": 153 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYN2-1", "protein_name": "Non-selective voltage-gated ion channel VDAC2", "gene_name": "AABR07051831.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAECCVLVCPRPMCIPPPYADLGKAARDIFNKGFGLGLVKLDVKTMSCSGGEFSISGSSNTDTGKVSGTLETKYKWCGYALTFTEKWNTNNTLGTEIAIENQICQGLKLTFDTMFSPNTGKKSGKIKSAYKRECINLGYDVDFDFDFGWLAGYQMTFDSAKSKLTRNNFAVCYRTGDFQLHTNVNNGTEFGGSIYQKVLCEDFDTSVNLAWTSGTNCTRFDIIAKYQLDPTASISAKVNNSSLIGVGYAQTLRPGVKLTPSALVYGKSFNAGGHKLGLDLELEV", "length": 284 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYX3-1", "protein_name": "Methyl-CpG binding domain protein 3 like 3", "gene_name": "Mbd3l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LGELGNAGRLTGSMIPSRLQKRRKIQVAKSKRKAKHKSGTTLRNPLRLTSCIFPQPVTVITSYPENKTRYRRDEAKLKKPQQLCALERLKNFQFGGDSKENLSCPLELANAVERIARGMQDEASNQSGDKDQLTSGQVTSDQPPYLETNEHVALQLSPSFSSQGVTLPVPLHLSPSYFLRKVTTGDIQRQAWKVKKARKRLAEALEADRLARQTENMRE", "length": 219 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZU9-1", "protein_name": "Keratin-associated protein", "gene_name": "ENSRNOG00000070302", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "SPSTCELSSSLHSDCQETCIEPSICQRSCVASSPCQMPCYYPRSSTACSPCQGTYDGSMGVGSNSLKSFGGFTGSLGYGNSGFGSFGFGSCGIRSQGFGCNFHRPGYFSSKSVQSSYYQPGYTSGFC", "length": 127 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZY5-1", "protein_name": "Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein", "gene_name": "ENSRNOG00000064452", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKIKAVTEESEAQGEGCSQQHRYQELLVYLNPIAQHPGFPPPDLRKIEKGKKKKKRRPTKQKQIRHGVKEVQKFVNKGKKGIMVLTGDTLRGTAIFQLCARTRICPTSIFPLTDLGAAMGSKHPTCVIMVKLHEEYHEAYDKCLEEVQTLATPL", "length": 155 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A2Z7-1", "protein_name": "Developmental pluripotency associated 1, pseudogene 1", "gene_name": "Dppa1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MMPPQVLISGLLLLLPAAWTTTVTSSDQLWNNHTEVVPTQSPLKISTKDLYIGTSVSAALLILLAGVLAVLKYRHRRKKILESAVVFHGFQNGVFQSTEQSQAVDVYVIEDSKVPVAH", "length": 118 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3D9-1", "protein_name": "Small nuclear ribonucleoprotein Sm D3", "gene_name": "Snrpd3l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSIGRPIEVLQEAQGYMVTRETITGEVYPGKLIEAEDNMNCQMSNITVTYRDGPVAQPEQVYICDTKIRFPILPNMLKNAPVLENLKNKNQGSRAGQGKAAILKAQVAARGRGHEMGPWKLPEAKTVFSIKENFPSCLLLGF", "length": 142 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3N0-1", "protein_name": "Uncharacterized protein", "gene_name": "Pramef20-ps2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQTPPTLEKLAIQSLIRNEDVAMSSLGELPAVLFPALFKEAFTGKHINLVKEVVAAWPFPCLLVGALMKTPNLETLQAVLDGVDMQLTRKFHTRRTKLQVLDLRNMHHYFWNIQAGEEDSSCSAENSKEKKVVKVFHRYALRKRVKVIVELYIHSCLKEEQTCLLKWAQQRKGSLHFCCTKMKVWNLSLCGIGEILKVFDPQHITELELHTEWTLLELAHFAPYFGQMRNLQKAFLAPLHRIMFSNSNGKRDREAKCIKKFISQFSKFNCLQHLHMFCVHFLRDHMNQVLGCLMTPLTLSITYYLISQKDLDSLSRSQSLFQLKHLDLRGVVLCDLDIMPLRGLLEKVADTLETLDLQWCKMTDSQLYALLPALRHCCQLTMVNFYSNNFSVPILKDLMQHIANWSRIRVQQYPAPLECYDDLAQVSVKRFAKLSSELMYTLGVIRQTKNISFATDICHTCGQRCVYHNGSRLCCCWH", "length": 480 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3R7-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "LOC120093241", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAARKALTVVAVLGSGAGVGSILFALVTPGELQKQLMLQEMPERDSRRRDAAVRTKELVMATLKDAAATKENVAWRRNWTVRGDGRSA", "length": 89 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3T5-1", "protein_name": "Large ribosomal subunit protein mL62", "gene_name": "Mrpl58", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EHGGRLGPTLEPEPSWNLVAPAARALCSPDSAQTGERHRVQEHLQPGQAVPRIQGRGYRLEGPGEPRKAGRKGRFLLLLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQKIALTHKNKINKAGELVLTSESSRYQFRNLAECLQKIRDMIAKASQVPKEPSKEDAQLQRLRIEKMNRERLRQKRINSTIKTSRRMTMD", "length": 211 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A478-1", "protein_name": "T-cell activation Rho GTPase-activating protein", "gene_name": "LOC134485907", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDVELVRANQTCTCKTIFFYWATGNALATFRSKEQKVQWYTFLTRSINEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHNIEDYQLWFSPGHKETPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERPRKSCMTSCFHGGSVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTNSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAAASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQSEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKTLFGRDLSKKLSIIKFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKSNTKKLEMSSAVPHEGGPTAGHNGTTSKYNVPQEKILHD", "length": 834 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A4C1-1", "protein_name": "RRM domain-containing protein", "gene_name": "ENSRNOG00000063783", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LTCCAINSDPHPDSGLKMEGHDPKEPEQLRKLFIGGLSFEATDDSLREHFEKWGTLTDCVVMRDPQTKRSRSFSFVTYSCVKEVDAAMCAQPHNVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIKTMEVMEDRLIDKIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGRGGNFDGRGGYGGGGGGSRGSYVGGDGGYNGFGGDSGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGGYDSYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGRMKRGRFGGRSSGSPYGGGYGSGGGSGGYGSRKF", "length": 350 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5E5-1", "protein_name": "Paired immunoglobulin-like type 2 receptor alpha", "gene_name": "Pilrb1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQILLLLLSATCLHTGNSGGYTRKNYFGVNQPAVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKEVHGEFIYQSTLSFIHEHFKDRLILNWTQGQTFGVLRILNLKENDQATYFSQVCLQTTEGMKCWQSIPGTKLIVTHGVICSLLISPQLSYDHEDPLHHHLCRPHSWPGEHKGPKESFTAEPGGHHWDGRGQSCSHHPPLRMDDLSVVEAKASRVTPKPQPE", "length": 230 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5T5-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "Rpl21l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRGTRYMFSRPFRNHGVIPLATYIRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRAYNVTQHAVGIIVNKQVKGKIPAKRINVRIEHTKHSKSRDGFLKRVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPELLERSPYEFMA", "length": 160 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A8T3-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RMNCSQAPGFILLGLSRDPEKWQLFFSVFLVLYLLGLSGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKILQTLWTGDGSISFSGCLTQLYFFAVFADMDNLLLAVMAIDRYAAICHPLLYPLLMTPCRCGVLVSGSWGVAHCVSLTHTLLLSQLYFHTNQMIPHFFCDFGPLLLLSCSDAHLNEGLMMALAGVFGISALLCIVSSYSCIFYAVARVPSAQGKRKALATCSSHLSVVLLFYSTVFTTYLKPPSSSYSSGEVVAAVMYTLVTPTLNPFIYSLRNKDVKSSLRRILNMVKSPD", "length": 310 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A969-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000067430", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFFLFWTFPGLELDKLALLSFESSSSIHPRACASTPAFQRSHNPGDAAQQEAKQREAEMRNSILTRVLDQSAWVRLSDLALVKPDKTKAVEHRVQMARYGQLSGTVSEQGFIETPEKVSQQTEEKATVKFNRREVTDSDEDDDY", "length": 144 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A9H4-1", "protein_name": "NAD(P)(+)--arginine ADP-ribosyltransferase", "gene_name": "Art3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQATARGVIKRKAFPGRQLSLSTTSCPGGKITPAESGNRFESGHHLNVLQRHKRQKRKMKMGHFELVTTLLAAMVLMDVFQVQAEVLDMAENVFDDEYLKCNSRMEMKYIPRMHGEELANDELLQSVWDKAGIQWEAQKAQLSLPKNFKDAYGIALTAYVTEAQDQSPFYHTFNRAVKIAGLSRRRYIYNFPFKAFHFYLVRALQLLRRPCEESYKNVVYSTSPNISFAFGEQNQARLGNFTLAYSAKPQTANEQRLLTIQTCFGVAVGKLLNKESEGIVLIPLSEVFQVSRKGTDDDLILHSINSTCSYYECSFLGGLKAGSCTTNPENPDPGYLNNPDLDSQKLEDSGRKSLDSVKMPEIKVLQGEENPLLPDEKPEDRNRGKANVPTPGLVPVPGPKSHPSSSSGHRLLPSDTASTILLIAAAVDFIAL", "length": 433 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AA84-1", "protein_name": "Ankyrin repeat domain 10", "gene_name": "Ankrd10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSAGAGAGVEAGFSSEELLSLRFPLHRACRDGDLVALCSLLPHTPRAHLAAEDSFYGWTPVHWAAHFGKVGAGTLRRHFPRGVLLGSERTPPCLESAATARSAPPAPPEGSRAHVQQSGLGVKGWGRGGAEAALAPPGVQGACAAARSPGPRGARGVMGGGAEMGSVWPAPRRTQGACAHLWLFRAGRADRMQLRRFARRPSGFGEWCGRLLLEARREPGASRSCLMETGRRAPLRHKGMDAALAAGGVRSAPAVVDGGLAARPTGPLSQLGPPCLECLIQLVRAGASLNVSTTRYAQTPAHIAAFGGHPQCLVWLIQAGANINKPDCEGETPIHKAARSGSLECISALVGNGAQTDLRNASGLTAADIAQTQGFQECTQFLLSLQNHQMSRFCPNGTLSGGHENILPNHINLGTNRKRCLEDSESLGVKKARTRVPSLDHTMPLANGDAEDDADRMHVDREFAAVSDMKNSSSVLNTLTNGSVINGHLDFPCVAQLNGMESRSDPCLTGSNGISNGQPFPSGQGPVCANGTEEPEKTMGVNPEMCGSLHLNGSPSSCVASRPSWVGDIGESLHYGHYHGFGDTAESIPELSSVLEHSSCVRVEQRYDSAVLGAMQLHHGS", "length": 621 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ABF4-1", "protein_name": "Nuclear transport factor 2", "gene_name": "AABR07018058.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGDKPIWEQIGSSFIQNYYPLFDNDRTQLGAIYIGASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSIMAQQYQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRLALHNSS", "length": 127 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC04-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r38", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSMLSQNKTLKSIEEVALHVILLCQVGVGTVANFLLFIHNFSVILTNCQLTPIQVIVTNLAVASAFNLLLLAFPNNVTLFVPRKAPSDLSCKLWYFICLVARSTNLSSTCVLSTYQFVMLLPGNWSRVILKGRAPKIVNYSCYGCWIFSVLNNAYIPVKVSGPQKTQNDTDFKDKWVCSTSGFSVGMSFLRFAHDALFISIMIWTNVSMVILLNRHHHRLQHIHSSNQDHRAYADTRAAHTILMLVVTFLSFYLLDCICTFFHISFVDSRLLLRRIKEVLTASFPTISPFLLIFRGPKNPCSLLSRS", "length": 307 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC51-1", "protein_name": "Non-histone chromosomal protein HMG-17", "gene_name": "Hmgn2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKADAGKDANNPAENGDAKTDQAQKADGAGDAK", "length": 90 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC66-1", "protein_name": "Eukaryotic translation initiation factor 6", "gene_name": "Eif6-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVVRASFENNCEVSCFARLTNTYSLVAIGGSENFYSVFEGELSDTIPVVHASIASCRIIGRGTSVWGTGMGYWYPTTTTDQELQHIHDSLLDSVQIRRVEEGLSALDNVTTCNDYVALVHPDLDRETEEILAGVLKVEVLTVADQVLVGSYCVFSNQGGLVYPKTSIEDQDELSSPLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSLIDRLT", "length": 245 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ACC5-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000069094", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LPLLAFEKYVVCDGELQRLQVSCEVLGDVDPPQRLSASVVQMKQSVVEFLGTLVEQDAQGAAEDMDNALVGDNEEAEGENNSTRTNSDGPFTERPNQRLNNR", "length": 102 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AEL7-1", "protein_name": "Protein phosphatase 4 regulatory subunit 3C like 1", "gene_name": "Ppp4r3cl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEDKLYRVKVYVMMEDKQWKDIGAGQISSKYIDRLQGVCLLVHSESDGSPILECKIQPNVPYQKHQGKVIIWSEAKNHGTAIHFQEPNDCQETWEVICQVQGKDPNVEITQLLTDDLESFKDMLLSWNKVEMSSCELHTLENIADLLSFVNEAPSHKKILTLVLEKEGYIKKLLQLFKTCEKHQNIDGLHYLNNIIRGILFLDNIHLFNIMFSDEFIMDVVGCLEYGPGLDEPKQHRQFLTQNVKFKNVMQITHSQLRKKIQQTYRMQYIYDIVLPTPSIFEVNLLHDLSTMIFFNKIEIITMLQEDEHFLLEVLAQLKDNTVSNERRHELLLFFKEFCAFAKTLHFQKKNTLLKTLIKLGIISALKVVVHMHDYQIQVAALELFAHLVEYSPRLIRAYAMKEAQYSEDNDGLLINIMIKQMTCDSDPEFSRSIILTTVLHAILDPENMRVTTKGHERRKFLNYFYRHCMNKLIEPILSITVENNSDDNRVNICPDNYQNAQLLGAILEILTFCVQYHSKYVKNYIISKNLLSRILILMSSKHTFLILCAVRFMRKMIGLKDKMYNLYIVEKNLFEPVVNAFMHNGHRYNMLNSAIIELFEFIRQENIKSLIANIVEKFFMFFESIQYVQTFKGLKTKYEEEKKKKRERQLRKSLHNIIYQRIYCRHIKAMEVKVKADIFCRQITDKEEEREKGGGGGEGGGGRGGEGEGGREGGGREGEGGGGGKGGRGEGGAVLSMGSDIPSHYDMFVKINEMNERENVIECRKRKSSATSEYSTSCGDTSDNGISTVYCSSLVPLVDYAYDTDGEDDDGSYGNNENEEEEEEEEEEEPPKKKPYFHP", "length": 840 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AFG0-1", "protein_name": "Cytochrome b5", "gene_name": "ENSRNOG00000064959", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFAKEKGKFEDMAKDVKCYTLGEIQKHQDIKNSWAMLHHRVYDLTKFLEEHLGEEEVLRERAGGHASENFEDVGCSTNVQGLSKVHIIGLFHPALITTIKLNSNWWDQLCSPTSQVVVAHTFNPSTREVGAVGFP", "length": 135 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGM4-1", "protein_name": "Proline rich 18", "gene_name": "Prr18", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLRLLGRVMSFSPMPPPPPPPPPPARTQGGPAARQLSRRPCGPPAASPPAPAAAAAGEKKRRPPEMLLSSSWPSATLKRPPARRGPGLGPGTPQPPTSARVPPQPSPGRGGTSATCSAPRRIACSHIPAGSTASGTSAGAGAGPEDATRFSLSLTPEAILVIQRRHLEKQLLARPRRPFPAPSADPRRPLVPCPRTRSSTLRRGGPTSVPDAPLAVAVSSRPPRASLLPGGLQATMPSPRPSSLRPVLKVSLLNEKHKYDDEEYEEEVEVVDEGLVRKCTEWLRGVESAAAARGRTGHLDSLPHLSTL", "length": 308 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGS9-1", "protein_name": "Olfactory receptor", "gene_name": "Or5aq7b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVWNSTGVKEFILIGLTENPNWQVPLFLLFCIIYFIILVGNCGMIFLIWLNVQLHTPMYFFLSNLSFCDICYSTIIAPKMIINFLSEHKSTRLFACILQSFFFAVYATTEVVLLSMMAYDRYVAIANPLMYTVIMTQSICTQMILASYLTGLINSLIHTIGLLKLNFCGPNIVNHFFCDVPPLLKLACSDSHINEILLLVFSGIIAISTLIIVIVSYIHIIIAILRIRSAMGRGKAFSTCASHLTAVALFYGSLTFSYIQPSSQYSMEQEKVSAVFYTLVIPMLNPLIYSLRNKDVKEAAQKLMLGKRNAC", "length": 312 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AIA3-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065493", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIFVPFFPHPGSIRKDGVVYAHTMENSSNSPRETREPAPLRRTWRGCFQRALPRVSKFFRRGRGSTGGWDNGSPRQGPMHSDQDLRHLRSLLSKESCPVMSK", "length": 102 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AK52-1", "protein_name": "Olfactory receptor", "gene_name": "Or9s14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAIEVHRNGSLSAMSLQGFVLLGFRGGAETQALLFTVFLVLYVVTVLGNLTMIMVITLDARLHSPMYFFLKNLSFVDLCLSTVVVPNALASIFFSSKTISFAGCATQFFFFSLLAATEAVLLAVMAYDRFMAICSPLRYPVTMCPMTCVRLVLGTFCVACLNSIVQTSLTFRLPFCSSNRIDHFYCDVPPLLQLACASTALNELVMFGICGFIIVCAVFVVIISYVYITVTILRMHSGSGRHKLFSTCGSHMTAVSLFYGTGFAVYGQPGGVASMEQGKVVSIIYILIIPMLNPLIYSLRNKDVKDALRRLGQRHSLAKESG", "length": 322 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMC4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "ENSRNOG00000068014", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCVFKNAWGHRNMCSMALCSQFGTHLHVSLTDAHSLSCNLIIRSPTKAEPLRYEGHCSMDEIVFLSFNNVNKTMPLGNQEKMANATKVQKCLTQWIDLLGQDLRDKVSEIKVHTTKTSGHPTLRVTMLSKHRHGEIIGASWEFNISENYSFILDLKTMKWKPQDIMKEWKDDETLMKHLNLSIVECSQKFNEFLNQHEERTSRYYLDSALPPAPPPLFKGFTILLWHSYTPAISPTSSDTHSSFINFRDGLIDINFPL", "length": 258 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMN7-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "ENSRNOG00000070681", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPGYITLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLACAEKKAAGKGDVSTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVLYCIIKGKARLGRLVHRKTCTTVVFTQVNSEDKGALAKLVGAIRTNYNDRYNEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMX9-1", "protein_name": "Ribosomal biogenesis factor", "gene_name": "Rbis", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKNKLKGQKSRNVFHIASHKPLKAKNKAKPVTTNLKKINIMNHEKVNRMNRAFVNIQKELANFSKSLSLKSVQKELHHEKEPANVDEATRLMAQL", "length": 96 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ARJ3-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "Or8b101l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTLGNVSSVKEFILLGLTQQPELQLPLFFLFLGIYVVSVVGNLGLIVLIVLNPHLHTPMYYFLFNLSFTDLCYSTVITPRMLVGFVKQNIISHAECMTQLFSFCFFVIDECYILTAMAYDRYAAICKPLLYQVTMSHQICLLMTVGVYMMGFVGAMAHTGSMLSLTFCEGNIINHYMCDIPPLQKLSCTSTSINELVVFTVVGVNVIIPTLTLFVSYTLILSNILSIHSAEGRSKAFSTCGSYIIAVSIFFGAVLFMYFKPSSASVDGDKVSTIFYTILGPMLNPFIYSIRNKDVHVALRRTLKKRIFT", "length": 309 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ATM0-1", "protein_name": "ELAV-like protein", "gene_name": "Elavl3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKDAGAGSCRYKGLGAAAVRPRARSAQRGPVGGREGGREERTHYPAPDRPDRGPAAEGRAAEISVGKSDFCGPRGAALRAPSTARPLPPSTCRQGSGRRSAHPQARVSSRPSRAPPPPSSPLRRPQSQTPGRDPGVSTRRPPRSARPPEPPSIRTAPAGHTRMVTQILGAMESQVGGGPAGPALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSKQHKA", "length": 522 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AUS4-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "ENSRNOG00000062467", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTAAGKTLAVVAVLGAGAGVGSILFALVTPGELQKQSMLQEMPERDSRRRNEAVRTKELVIATLKDAAATKGNVAWRRTGQLEGQGRMCGTKGTNKCSLPIKWISQLDI", "length": 110 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AWY6-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065059", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKATKKSKNTTSDVEPSTSSAKSKKAKTCYQYQTRAGEKKSRWSGSDCSVNVQKTTKKAKRTLPRIAENNTSEKTVPPTKKTKRAKDEQLFGHYHRLMDEISTSTERGPEQSSTDSSSASTSDEESQ", "length": 128 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B5G4-1", "protein_name": "protein-tyrosine-phosphatase", "gene_name": "Ptp4a1l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARMNCPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCKATHDTTLVEKESIHVLEWHFDDGAPPSNQIVDDWLSLVKIKFPEEPGCRIAVRCVAGLGRAPGLVALALIEGGMNYEDAVQFIRQKRRGAFNGQQRLPLEKYHPKMWLRFKDSNSHRNNCCIQ", "length": 173 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B646-1", "protein_name": "Ankyrin repeat domain 66", "gene_name": "Ankrd66", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSREARLHHQTPGDQEAGAACLLSWGGGGASFHGVNTLTLRPAMMACSTELLKDTDSVMELSKLSDMTKLHQAVAAGDYNSVKKILKKGLCDPNYKDVDWNDRTPLHWAAIRGQMEVIHLLIQYGARPCLVTDVGWTAAHFAAESGHLNVLKTLHALHAAIDAADFFGDTPKRIAQIYGQKDCVDFLDTAEPECRDHRQRGLLFDERDPDWDLKKRELELSLPVPDQNTNKKKKRIRGSTRVNHSKAWRI", "length": 251 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G1V0-1", "protein_name": "Ankyrin repeat domain 62 like", "gene_name": "Ankrd62l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRVAGLSSKKSRWLLQSLLDQQRHSLGTGFESANILLSPKYHLKDKDLRKIHKAARDGDAARVQQLLLGKHCVNDKDKKKRTALHIACAYGHPKVVMALVEGKCEVNATDSEECTSLVKAVQCQEEECATILLENNADPNIVDAQGNSALHYAVYYKNTSLAAKLLDHEVNIEATNKDGFTPFLLAVSENKLKIAKFLLMKNASIHAADNQKRTALMHAVSHDSTNLVRFVLEQGVDLFVKDAFGLTAIDYAADFKYNSNMEILLEYKAKRYEESERANLVEKSSEEDSSRRKDQQSQELENMEKEELTEPGNGTEEQEPDGGVTSVEEPRRLDDRGDDQPQEAVTAPRTREKEQELPFTDMCTVVTGKEDEDESSWDSESVSENLPLIRIGVDGLLLVNGQAVENPEKYLHWLHNRKGEESVPNETKGVGDLQAFTPAEPGLELTSEEKHEELSRNEDCQPQVEEERTQEWSGWGAPEALCAAALDHGDIGSPLTRENGHPRARQSPSVDSEEQDGGSGLNIKEEKTRDHEEWSGDFLMDRTSKESEPAAGDLLQVKDSWSLNDTDPNKGSPAKRKSKEKHKVRGEMNAMEDADDFTPLSESCSDNKAELCCNTHQAETETESCELLTRQTGNMEGGVAGEVLKTEPARSREALKETEETGEGARVKMQLPGKDELYSEDAERQQYDMALSALHLKTKQTVRQLQETQDRQREVVRSSQRMQDHLQKLQAGCSEAEAMVQEQGKKTAELQKLHAGMIHELKEKWETIASKYLPLNIQLKYLEQELLSIKIAQKQYEKLHEDQRTLQRDAVDLQHQVQENMAKLDDEKQAMALRDSNNDSLMSQVELRIKNLESNLQKLQAEKESNERNVEKYLQRYIRERELSKTLSHTLHRTNSKLSRVRTDILLVTERNRTVQNTLTTRPVPKSPGVTEHSAYVNRNPNFIASRNLEAAMSSPQPSPELMRRRLLKKQKNMVKNITEEVDKAAAELESWSLEAYPSGSK", "length": 1003 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G430-1", "protein_name": "Large ribosomal subunit protein eL24", "gene_name": "LOC689816", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLETCRNLSAIGYIWEDNSTEEYCKSSRRHGRPTSVTMKVNLCSFSGYKIYSGHERLYARTDGKFSSFLMPNVSPHSFPKGTLGKLTGLSSTEENTRKDSRKKFKRKEPTLQKFQRAITGASLADIMAKRNQKPEVRKAQQEQAIRDAKEAKKAKQASKKTAMAAAKAPTKAAPKQKIVKPVKVSAPRVGGKR", "length": 193 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G808-1", "protein_name": "Paired immunoglobulin-like type 2 receptor beta", "gene_name": "Pilrb2l7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARILLLLLSAACLHTGNSAGYPKKYDYGVDQPAVLSGVQSGSIEIPFSFYFPWELAKDPQMRIAWRWKVFHGEFIYNSTQPFIHEHFKGRLIMNWTQGQTSGVLRILNLKENDQATYFSRVFLRTTEGMKSWQSIPGTQLIIHALITTPGSPSIIPSAVPTTGLEDTRGQRTPSLLNLGAMVGMVVSKVVVIIPLYGWVIFLWWKQRTQFRRDLVSEHPWKNFVPILPAESSSFL", "length": 236 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GB91-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c117b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TNRYYFNIFMIIMQNQSFVTEFILLGLSQNPNVENILCVVFLFIYLATIGGNMIIVVTIIYSPALLGSPMYFFLIFLSLLDACTSSTVTPKMIVDFFYERKTISFECCMTQLFAIHFFTGIEVIILSAMAYDRYVAICKPLHYSSIMTQRLCGILVIVSWAGGFLHSIIQIIFTLQLPFCGPNVIDHYLCDLFPLLKLACTEPHIFVILVFSNSGSISIIIFSILLVSYGIILFSLRAHSSEGRRKALSTCGSHITVVLLFFVPCFLIYARPTSAFSSEKNAFVFATIITPLLNPMVYTFRNKEMKNAIRKMWKRLIMVSCNY", "length": 323 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GF85-1", "protein_name": "Ceramide-1-phosphate transfer protein", "gene_name": "ENSRNOG00000064148", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "HFFLEYLNNLKIMLIFLSPPTGGWASDHHSPTTGTHLRFLNSLGAAFSFISKEVVSKLQIMEHPRSSPQSEHCSSLQSMAAYEVSNKLLDLARRSGPLHSNSGCRTVLCLHRALHWLQLFLEGLRTSSEDARTSTLCTEAYSAMLCAYHSWIRQAVTVAFCALPSGKVFLEMLGEALPFMEQMCDISQFYVEHFLLDLP", "length": 199 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GFV7-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f21c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLTMYLATVLGNLLIILAISTDARLHTPMYFFIMILSFTDVCFSSTTVPKVLANYMLRSQTISFSGCLTHLYFLCVFADMDNFLLAVMAYDRFVAICHPLHYTTKMTNKFCVLLIVGSWVLTNLNALLHTLLMAQLSFCGDNIIPHFFCDATPLLKLSCSDTHLNDLMILTEGTMIVVTPFFCILISYIHITCAVLRVSSPRGGWKAFSTCVSHLAVVCLFYGTIISLYFNPSSSHFAGKDMAGAIMYTVVTPMLNPFIYSLRNRNMKGVLRKVLILRFPSKQ", "length": 313 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GGC1-1", "protein_name": "Histocompatibility 60b like 1", "gene_name": "H60bl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKGATSKCNHSLTLSLLVLLNSLGTMQVDGTDSLSCNFTVQYKVSLGQCSVNGMTVLCFDDVRQNSPVCKTEKKGNATKLCNDLNQCLSYSFYEMMKLESGLFESKGNHTLRVTVQSQYNQGEFMDGCWAFMIDRQYPFYFYPKNMTWRENQPNAIKTMSQWENNRELFQSLKFLSTGDFSLCLKKLLTDSRELTRSTIKAPDTTQPTSTTQSPSTGNSTPAMSSNQSPSTGNSTQPTSTTDYLIVFEFTAIFLALIVVSMEKKKVLPAAPLPLQYELQSPSPAVLEES", "length": 290 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GIM2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x11c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADLFNVTEFIFLGLSPNKEVQRVCFVLFLLLYMAIVLGNLLMVVTVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLILDLLAEMKSISVWGCMTQLFFLHYFGGIEIFLLTVMAYDRYVAICKPLHYTSIMNRKVCIVLVGTAWTGGFVHSFAQIVLIFPLPFCGPNTIDHYFCDVLPLLKLACSDTFLIGLLIVANAGTLSVIIFVVLLASYVVILFHLRTLSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRRSDTLPVDKMIAVFYTVITPLLNPLIYSLRSAEVKKAMKNLWFRTMKADEK", "length": 309 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJN1-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein A1", "gene_name": "Hnrnpa1-ps20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LSQSPPRNRTEQLWKLFIDGLSFETTDESLRSHFERWGTLTDCVVMRDPNTKRPRGFGFVTYTTVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGSIKEDTEEHHLREYFEQYGKIEVIEIMTDRGSGQKRGFVFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGRNGSGNFGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGSRSSGSYGGGGQYFANPRNQGGYGGSSSSSSYGSGRRF", "length": 319 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJR0-1", "protein_name": "Aspartate aminotransferase", "gene_name": "Got2-ps6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLHSRMATTFHPGLAAAASARASSWWTHVEMGPPDPILGVAEAFKRDTNSKKMNLGVCAYRDDNGKPYMIPSIRRQRPRLLEKIWTKNAYPSGDWLVFVRLLQRSEPVFCKDILSLAKMSFYPNHPGETTRPSSGMPACSYKVIDTMTHKTCGFDFSGALEDISRIPEQSVLLLHACAHNPMGVDPRPEKWKEMVSVVKKKSLFAFFDMAYQGFASGDGDKDAWAVQHFIEQGINVCLCQSYAKNMGLYGERVGSFTVVCKDEEEAKRVESQLKILIRPLYSSPPLNGARIAATILTSPDLRKQWLQEVKGMADRIISKRTQLISNLKKEGLFHNWQHITDQIGMFFYMIKDGRISVAGVTSGNVCYLTHAIHQVTK", "length": 379 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GL73-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC134481331", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLVSLPEQNLAMARILLLFLSAACLHTGNSSGYRRVNDFGVNQPAVLSGVQSGSIEIPFSFYFPWELANDRSMSIAWIWKYFHGEVIYNSTQPFLHEHFKGRLIMNWTQGQTSGVLRILNLKENDQARYFSRVFLRTTEGMKSWQSIPGTQLIIHALNTTMGSPSIIPSAVPTAGLEDKRGQRNPSLLNLGVMVGMVLAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GLF3-1", "protein_name": "Heat shock protein 90 alpha family class B member 1, pseudogene 13", "gene_name": "Hsp90ab1-ps13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEEVHHGEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLWELISNASDALDKIRYESQTDPSKLDSGKELKIDIIPNPQERMLTLVDTGIGMTKADLINNLGTIAKSEDQTEYLEERRVKEVVEKHLQFIGYPITLYLEKEREKEISADEAEEEKREKEEEDKEDEEKPKIEDVGSDEEDESSKDKKKKTKTIKEKSIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNAWEDHLAMTSLSGYVSRMKETQKPIYYISGESKEQVANSAFVERVWKRGFEVVNMTEPIDDYCVQQLKEFNGKSLVSVTKEGLELPEDEEEKKKMEESQTKFENLCKLMKEILDKKVEKVTIPSRLVSSPCCIVTSTCGWTANMERIMKARALRDNSTMEYVMAKKHLDINPDHPMVETLRQKAEADTNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNCIYCMIKLGLGIDEDEVTAEELSAAVREEIPPWRVMRMPLAWKKWIKGSWEAPALCIVSLGLPQQP", "length": 518 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GM54-1", "protein_name": "MAGE domain-containing protein", "gene_name": "Mageb11l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPHDQKSKLHSRENSYQAGGGAQAYGDAEEIAEAAAEAAEESSAKSQSQPGAEYSRNHRAPPKAKPSAKLILSSSSSESDESSHEESEPSVQKDRPFLHQDLIERRVAILLQYLLHNYNLKQLTTKEEMLKVITKKYEKDFPEILRKASEKLEDAFAVEVREVSSSQPSYDLISKLKLPNNGRIRAGKGLPKTGFLMSILGIIFIQGNSASEEDIWKILKKKRIYPGKKHRVFGEPRKLMTQYLVKLKYLEYRQVAHSDPPRYEFLWGPQAHAETSKMKVLEYLAKINKTTPHAISALYQEALKDEKERAEVRDEDNTDTTDQSTEGSPEKSPTASTTPVDT", "length": 342 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8J8YII4-1", "protein_name": "Coiled-coil domain containing 188", "gene_name": "Ccdc188", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEGPEPLGPCGHSHTQHPPAPVSNNHGGCLNQPCQGFVRWPCLVPLQSTQSLESSRPFPAPGTGSGGPRMRGEAPGMFLSSEGEIPRQRAREPAGARQEEVEVEWDWPLHPGHEQGPPRQTAPPTSGPRPCPCPTLPPRGRATASSRQAPTQLQGGTLESAQQSFLQLEQENHSLKRQNQDLREQLGALLGPGQQFLPLCSEHSSCTALAWVSGNTRSRTHAAAPPAVHSLGPDPGALPQSPESARTRLLEDRAPVQLLRQQELCPGKESFVRQSQSELQQIRLSFERKKMAITEVWDGVAEVHMALNNQATGLLNLKKDIRGVLEQMEDIQLEILGERAQCRTQARKQQQMMEAAGLEAAAGCSAGLHSGLRVRGGPHTLRGAGATPAEPSQRLEAQGLTGSLLTPGGGRLPAFLEQKPSGPSKEARWLVLPQGLRGLTGPCLQHCGTWPLPEAAEKGGGRASPEGWACSWIYSHDTLCM", "length": 481 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8M9PVG7-1", "protein_name": "5-hydroxytryptamine receptor 7", "gene_name": "htr7a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLGDTNRTIIAKSHGETMKSLMAEERARETGASVETFNGIMISEVLVPRLFKIAHESGEVAVAAGSGSMDMKPSSSPILLEMMEVANGTRCAEQILSYGEVEKVLIGGVLTMLTLITICGNMLVVISVCFVKKLRQPSNYLIVSLALADLSVALAVMPFVSITDLIGGRWIFGKFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGWCMAKMVLSVWLLSASITLPPLFGWAQNVNDDRVCLISQDFGYTIYSTAVAFYIPMTVMLVMYYRIFRAAKLSAAKHTITGFPRVEQEEVEEDEVEEDGGDGAEEPTGVDCVTVAIKLQREVEECARLPRILRGVGRRCSDRRSISIFKREQKAAATLGIVVGAFTICWLPFFLLSTARPFICGTECSCIPLWVERTLLWLGYANSLINPFIYAFFNRDLRTTYRSLLSCRYRNINRRLSAAGMHEALRLVERPEVVVSG", "length": 479 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M9QGZ8-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "pimr118", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLFTVLGVIALFLRERDTNNTEEEVQNDVPPVRNSDGQEIDDWCKEPSLLEPVSVHSEEPSLEEPVSAHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLKEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPSLDLSFFSAESSWSEDLSSSFLTVESSWSDDLSSGFLTAESGCGDDEPLFVDSAEPEKLKEDKETQIIEINSHCYAIEAQLGEGGCGAVFSATRLEDGLQVAVKLSDFEEEKRFISVDGFEDPLPLEIALHFLANKGPKVKEIIELLDWKVEADRYFMVLEQPIPCMSLHEFLLDCEGIIPENKLRTIMYQTTVAAQTCCQRGVLHRDIKLENLLINPDTLEVKLIDFGCGDLLTEDSFQYFRGTREYFPPEFSSTGRYHGEPATVWSLGVVLFLLVFYRFPEQSDLPRMNNRRLRIKGLSRDCCDFFHGCLQLDPKDRLELQNLSSHKWIRTRTRRNDENCPNLTDGSSHSNHPITSN", "length": 567 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8V0WZU8-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6B2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMVVNLILGWWLVAVSRAQKLPRPSLSLHPSQGASLGDNVTLRCHLPQPAAWVRLYRYQNPTYIEQKDNVQDMAEFSLTSIKQEDAVIYQCQYQGLAPAGTSQKSDPMELLVTDHRYPPPGISLSPKEHVEMGSNITIQCWNKDYGASFLLHKGGHSAPIQHQEPDYWGTATFTLFGVTPADSGTYRCSYRIGGCCLLFSPLGDNVTLEVIPRPAPPGVNGGPSRNLVAAVAGGCAAAIVIITVSFLLVALRRQMQRAERPGATPRSPEAVQFQVSPGDSEGLTYAQLQAVTPSTHPPTSSTTPEPPIIYAEVGTRGPR", "length": 321 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEA0-1", "protein_name": "C-type lectin like 8, MHCY region", "gene_name": "YLEC8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 276 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XED4-1", "protein_name": "C-type lectin like 18, MHCY region", "gene_name": "YLEC50", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYLSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKAHPQ", "length": 276 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEJ6-1", "protein_name": "Sulfotransferase", "gene_name": "LOC769841", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVCRAAAPNSHPSTMPVHYVTYKGIKFPPAYNSVHSLSFAHNEFLVRDDDVFNITYPKSGTVWMTEILSLIRSHGHPSWNQTVLNSDRMPWFSTRLGLEAALSYPSPRLLTCHLPRHIFPKSFSHSTAKVIYTLRDPRDVVVSYFYFCKMCNSYEDPVSFEQFLRDFLSGELPHGSWFEHVRGWMQMKDRENFFFITYEELKQDLQGSVRRLCHFLGQNLDDDAISSVVQNASFMAMRQNPMCSSILLPADIMDQTKGQFLRKGICGDWKNHFTVAQTETFNRIYLEKMRGLNVAFPWDRDQDPDLTEQ", "length": 309 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGU1-1", "protein_name": "C-type lectin domain-containing protein", "gene_name": "YLEC62", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTGSDPQLPEEDVHISVLESNTSTPAMGEGDQQETFLEHKAVTEPLGQSGEKPQWGSRCHGTGRRRSRVQLIAVHAAVGALILMLVVLVISTVCRRASIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCNAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 277 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGW1-1", "protein_name": "NHL repeat-containing protein 3", "gene_name": "NHLRC3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAPAVLWRLQRLSAAERLEARLSGAVRKEPGRGEARQSEKKPHSPHCPLRCSYACPGRTPMTSESGRKALSHLGRQQQCLNKMAELRARLEAFPAPECLFKTLNPFMGFLRLFFAPQPLGGEQALFRAAQCAEASPRIPAPQAWAGRSRGCHGNAARPASMGRKQAVGPRLVMAGALLTLLGLLWGSQMLKAFDYFSSWKGDGEQQMYKLDISWPKIPEYFSGQTFCVAVDSLHGLVYVGQRGDDIPKVLVFSVEGYFLYSWNDTVEMPHGIFVLNTATDSSVWITDVGSGKYGHTVKQYSPSGKLLQVLGTPGNAGSSLNPLQFDQPAEIFVEESGEMYIVDGDGGMNNRLLKLSQDYKEIWLSGENGTGIGQFKIPHSVTVDPFGRVWVADRDNRRIQVFDKVTGEWLGAWSSCFLEDGPYSVRFTGNYKYLIVAHLNINRLAILAAPPVGEIGDCAIVSTIQLADETKPHLVDVDVKSGAIYIAEIGAQQVQRFVPLS", "length": 502 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPN1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR2A13", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMAVALILGWWLVAASRAQQLPRPSLSLHPSQGVSLGDNVTLRCHLPRPAAWVWLYLEGRWSYAKYIDKKQDTTEFSFLSASHDQAGTYLCQYQVSESEDVSVTSDPVKLVLTDRSFPPPHISLHPEERVGTGTNVTICCWNKDYGATFLLHKDGRSDPIQRLVPDDVGAVSFTLFGVTPADSGTYRCSYHPKNYPFLSSPLGDSVTLEVTPTPAPPGAELVSRGNLVVAVVRGCAAALIFGLGVFFVIDARSLWIRRDESLGGEGI", "length": 269 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPP6-1", "protein_name": "SUN domain-containing protein", "gene_name": "LOC776146", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDETGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XQE0-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6A8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEPMAVNLILGWWLVAGSRAQQLPRPSLSLHPSRGVSLGNLVTLRCHLPRLAAWVWLYRGGGWSYKKGKKKEQDAAEFSFASTLREHAGRYRCQYRVYESAEVSVESDPVELVLTDVRYPPSSISLQPEQHVGTGTSVTIHCWNKDYGATFFLHKDGSSDPLQRQDSSGGGTATFTLFGVTPADSGTYRCSYRHWRYAFMSSPLGDSVMLEVTPTPAPPGAELVSRGNLVVAVVRGCAAVLIFALGVFFVIDARSLWIGRDESLGGKGI", "length": 269 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XTD2-1", "protein_name": "Coiled-coil domain containing 97", "gene_name": "CCDC97", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKEDPKEAEGPTASKWIPIASNGNPTASKWIPIASNGDPTAPKWVPISSNGDPNWVPISSNRDPMASKWIPVSSDRDPTVTKENPPSSNETPAAEWDPKVPPEGRPVEEGDPKASPTEDPPAEPDPKASNCAPLSSHWAPEAAVWDPTSPHRDPTAEPQCSASPEQHRAAQRDPASPMEEDRYPATHGVRPATRADPAPYGDHPEAEEDPLPAAVEAMLAAVAASPVRVRSQQQGDPELTAAERRRDLRALFLRKPLVFLERFHGALQAEHLPCFAHLPPRYEVAFYCRQVRARRQQNPQTGLSRWPRRPGARTRLRNRRYAALRQLIAGGEYFSEEEMRAREPLLYEHYIGQYRDAETPPGTPPCPPHPGTPPGTTWAAALLRSVEEAAVQQRLQRQRLREGDSGEEDEDEDEAEEPHIPDAGELEVLREEFRSRMYQRFLDGEDRDFDYSQVDENPDMDNLDIESRDAEERYFDEEEPSAAPQLE", "length": 487 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Y889-1", "protein_name": "Transmembrane protein 65", "gene_name": "TMEM65", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWLGRAVLLLGRPGGPAAPSSSSRLCSLRGPPRCCCRRRLSSLRGGADGLLPARGAPPGRALGTHPKKEPMEALNTAQGARDFIYSLHSTERSCLLRELHRFESIAIAQDPIAARASCQQYGETWAHQEPSGACSSVHSQAYHQKEAVPSSNCPSTKYDRTHYLWPPLMAEAAGKPGRCPHCCAEGWSSEKLEVAPPSPGQLRHVFFHNALPFVGFGFLDNAIMIAAGTQIELSIGVVLGISTMAAAALGNLVSDLAGLGLAGYVEALASRLGLSIPDLTPKQADMWQTRLSAHLGKAIGVTVGCILGMFPLLFFGDEEEKLEEKN", "length": 328 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YA34-1", "protein_name": "SWIM-type domain-containing protein", "gene_name": "LOC100859602", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAERGQLPPYAKRLCCRPGYGSGCRLGQQAGDTGPGSGTFCAGPSSAAAAAAAAAAATAASLVLLPLGKTQSPESLLDIAARKVAEKWPFQRVEEQFERIPEPVQRRIVYWSFPRSEREICMYSSFDTGAEGFTAPGSAAGNTASGGAVDAVADENRLPFRRGMALLDGGCVDNVLQVGFHLSGTVTEPAMQSEPETVFNVAISFDRCKITSVTCSCGNKDIFYCAHVVALSLYRIRKPDQVKLHLPISETLFQMNRDQLQKFVQYLITVHHTEVLPTAQKLADEILSQNSEISQVHGAPDPTAGASIDDENCWHLDEEQVQEQVKLFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITDQFMADPRLLLWRQQGTAMTDKYRQLWDELGALWMCIVLNPHCKLEQKTSWLKQLKKWNCVDVCPWEDGNHGNELPNLTNALPQGANANQDSSNRPHRTVFTRAIEACDLHWQDSHLLHIISSDLYTNYCYHDDTESSLFDSHGWPLWHEHVPTACARVDALRSHGYSREALRLAIAIVNTLRRQQQKQLEMFQARKKELLYRGITSITNLEGWVGHPLDPIGTLFSSLMEACRVDDDNFHGFSDFMENTSQHKSLEYQHLPAHKFLEEGESYLMLAVEVALIGLGQQRIMPDGLYAQEKVCRNEEQLISKLQEIELDDTLVKIFRKQAVFLLEAGPYSGLGEVIHRESVPMHTFAKYLFTSLLPHDAELAYKITLRAMRLLVLESTAPSGDMSHPHHIASIVPNRYPRWFNLSHIESQQCELASTMLSAAKGDVQRLETVLQSIQKNIHSSSHIFKLAQDAFKIATLTDSLPDITLLKVSLELGLQVMRMTLSTLNWRRREMVRWLVTCATELGVHALDSIMQNWFTLFTPTEATSIVATTVMSNSTIVRLHLDCLQQEKLAGSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAATTGMSYSQLFTIARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACALSHSLGKNELAAIIPLVVKSVKCATVLSDILRRCTLTTPGMVGLQGRRNSVKLMSLDKAPLRQLLDATIGAYINTTHSRLTHISPRHYGEFIEFLSKARETFLMSHDGQIQFTQFINNLKQIYKGKKKLMMLVRERFG", "length": 1168 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YDY5-1", "protein_name": "SKA complex subunit 1", "gene_name": "SKA1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEAEGLEALSRHLAAKIGLIKRLLQLRGLGRREMLAEVGMEVAVLHGLLGRMEEEVNQRRQLAAALQEMRKRAEKEKWEAERLQLVKKAAKEAPLVNDAPLISDEEFESVPGYMRGRLTLAQTNAALRALHAAAASKYRLLRHPPKSLPSSSRALCHRFREEETKETQGLTFVVEADLKEFTQLKVDRTFHRIVGVLRHCRRLREVRGARLVRYVLP", "length": 217 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Z0M2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 10", "gene_name": "TNFSF10", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLPAGGPSPAHTCGAVLVAAVLLQSVCVAVTYIYFTNELKQFANADLVHSCERGHPLSPPPPPDVPQTAVTRPTKAEGGAAPVGASCSIGQSRRAQSDLRQRAANAASPQHGPPCAARSRARCSCPRCTAGPRVCRRTQQKLWDTYSRSGTACLTGEELGDLIQNLDVVESKDRVADPCWQVKWHLGKLIKKMMSRILQENMSAINGDRTQALPRRDEPPQGPTLRIAAHLTGSSKRSSASPHIDYLSYRGIGHKIHSWESSRRGHSFLYNVELWNGELVVPQTGFYYIYSQTYFRFRENEDEDSGLLERIKNPKQLVQYIYKLTNYPDPILLMKSARTSCWSKKAEYGLYSIYQGGVFQLKREDRIFVSVSNSDIVDMDKEASFFGAFMIS", "length": 392 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZCD9-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418390", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMSALLFTLLHYWKIWFCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEREEQQEQVEEEEQLERVEELEQEDQVEHVEQEEQEEREDQGEQVQQEEQVEEVEQEDEEEEYFHHSALTRYIARRAWEKMQGKATKCVLVEELMSDLLQTYTFVCSNSFYPVLQPAIGVGSAFEGWSPCEEDIVYRLLVPIKAPHGHVFHPELGEEGEVLARNSRIRVELVCMCTREQQLGDVLCFLHHSEEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRTWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKVLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRVLRDFKELKDRLFRLLLFGR", "length": 542 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZD85-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418382", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAIFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZE07-1", "protein_name": "LIM domain only 1", "gene_name": "LIMO1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVLDKEDGVPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRDSNPMGWYGSHPVTAAWEAEARTTSLGQPGVRAAELP", "length": 158 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZGC1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "LOC124416945", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVAGSPALLLLLSLGLCFTGAQGQGNTMAVSFLNRSMKHPKEGQRLGLECHTYKTSWGVSWIRLDKDGNLHFIVYISKFSSTTFPGNKGASSQFEVSKQGSSYRLTVKNFRAQDQGIYFCIANINQVLHFSSGQRAFFPVTTTTAAPTTLRAVTLTATTQSSQVTMKDISQHSPDPGRSKENMPNFCCKLVMWVNLACACLLLLTAITITTTHCQRPSSP", "length": 220 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZPB4-1", "protein_name": "trypsin", "gene_name": "LOC107049069", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKFLVLVAFVGVAVAFPIRDEDDDKIVGGYSCARSAAPYQVSLNSGCHFCGGSLISSQWVLSAAHCYKSSIQVKLGEYNLAAQDGSEQTISSSKVIRHSGYNANTLNNDTMLIKLSKAATLNSYVNTVPLPTSCVTAGTTCLISGWGNTLSSGSLYPDVLQCLNAPVLSSSQCSSAYPGRITSNMICIGYLNGGKDSCQGDSGGPVVCNGQLQGIVSWGFGCAQKGYPGVYTKVCNYVSWIKTTMSSN", "length": 248 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A1Z3-1", "protein_name": "Bridging integrator 2", "gene_name": "BIN2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPSLYHPNAIPVPFPSHPCTTLMSSLTHHIIPVPSSCLPNVIPIPYHPHVISTLSLLHPHFIPMAFLNLPHAIPVPPLIHSCAVPMSYHPFPISFSFPSPSHPSIAPMQSPSYPYPTPVPPPFHLLPIPIPTPVPPPCHSCSIPIQPRCRLHAILVPFPPHCHPHPVPAPSPPHPSAIPMPSHFHPHPIPVPPHTISIPSPPQCHLHAIPVPSPTHPHPIPSHPRFPHPLWAQGHPHPRGSNLSPPIPPPPPNTFALQNEGNKLYKDLKAFVGAVKVMHESSRKVAETLQEIYSTEWDGHVELKAIADSNDLLWDDYEAKLGDQALRLMENYLAQFGDIKERIAKRGRKLVDYDSARHHLEALQNAKKKDEAKIAKAEEEFNRAQAVFEELNRELREELPVLYGSRIACYVTIFQNISNLRDIFYKEMSKLNRDLYEVMGKLDKQHSSKVFIIKGVPSKRRSLLISAPVSPPAAYPCPGKAPNWDPSSGAEQTPTSPRVGSDATEDVPNGLAAPGPAEPGAPMPGPPPASPTSVRSASESESECSEESREIDLSPKEMEVSVGSGCPEYPKTEGAAKGEVEGIAASMASMIVSEAIAAATGAAPGDSDGVGGGDSTDSEISPAEGAWGGPSPGGSEERVEGTDVSPEVGSDAGPCEHGTPEPPQQDVSCDPPQDPSESLTPL", "length": 682 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A7J1-1", "protein_name": "Mitochondrial transcription termination factor 4", "gene_name": "MTERF4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAGRLLGLLRARAPRAVLPAPGPASRHRCGTAGPEEGEAAELLAMGFSQAQARRLRLLRPGLEPQRRAEAAAQLLLLGLSAEAALGLLERSPGLLRMETARLKERAEYLRRLGLEGERGGPLPRGVHAAPAEDGGGGAAAAGAVSVHGRAADRAAAELPRGAAGGAGPRAAPLPGAGRRAGRSGGVAGAARPALSSARLHAQYAYFRMGVRQKEMVKARLFRTPFAELRNRHVFLERRGLYRTPHKGQSQSGNPALRDVLRPTEGDFVAGVARASPDEYEVFKRLLAREEEEMEEEEEEDEEEEEEEEGSAALHAEGGDRDWHSSEPSPIAPCPPAPQ", "length": 338 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AKD9-1", "protein_name": "Borealin", "gene_name": "LOC121107214", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPARRKAAAGARGRKLSAFLKDFDREVRSRVEQLRTNGERLVKEMENLYDVELLRLPAALREMNWLEFFAKGGSQKVVEEAVTADLGITEINKLTAELIQTPLKIVTKEKSKQGIEATEEAAEVPLLPPAKKAKHDSQLLLEQAAASTNPRNGKVRTSTKKAPVSRSRRAPSARVKRVSKRSSKSSFITPATGRNLDLCARGGASIVTPRFDSRVFKTPGLRTPAVNERVYTISANGSPLADGNDVFITVPVGGGESIRLTASDLTKKNLLHLNPEARGIMKKLSVRLAQACSSAKTHR", "length": 300 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AMC7-1", "protein_name": "ODF3A protein", "gene_name": "LOC121107218", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPVTKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8W4F7J1-1", "protein_name": "40S ribosomal protein S26", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQPIHCTNCARCMPKDKAIEKFIIRNIVEAAAVGVISEVSVFAAYVLPKLYAKRHYCESCAIHSKVIRNRSREAQKVRTPPPRFRPTGAALRPPPKCM", "length": 98 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F8K9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTVTTFILLGLTDEPQLKTLVFIFLFLTYMLSVTGNIISLTSTDSHLKTAMYFFLQNFSFLEIAFTSACIPKYLYNIATGDKTITYNSCATQLFFTDLFAVTEFFLLATMSYDRYVAICKPLHYVTIVNHTVCRRLIFGSWLAGLLIIIPPLSLGLKLEFCDSNVIDHFVCDAAPLLKISCSETWLIEQMVIVCAVLTFIMTLMCVVLSYVHILKTILQFPSAQQRKKAFSTCSSHMIMVSISYGSCIFIYVKPSPKDSLAVNKGVTILTTSIAPMLNPFIYTLRNKQVKQAFNDAIKRIALFSKN", "length": 309 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F9E2-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RLEFSSLSPAEVPLVAAAGGRGAFDMRCHECDTKNTFACDHIVTCPRGIRRCLTLSIRLSSREIYVYKGCTRNCTFIYADEQPPPGERKPPRSNSLYFVQCCNAITCNRGGPINLEKDITPPLILEEELGGTVRLGEATLFLSVASVLVSHALT", "length": 154 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBC5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLTHSFSFFSSSSSSSTYSSSYPLLPLLLQPQNQFRIWALKDYGQRNSTSLHDFILLGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSTAGQRKAINTCGSHLTVVSIFYGAIIYLYLQPGNSASKDQGKFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 331 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBS2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258626", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTAITTFILLGLTEDPQLQLLLFLFLFLTYILSVAGNLTIITLTLLDPHLKTPMYFFLQNFSLLEISFTTACIPRFLYSISTGDRTITYNTCFTQLFLTDLFVITEFFLLATMAYDRYVAICKPLHYMTIMSNKLCKTMVVCCWLAALLIILPPFSLCFHLEFCDSNLIDHFACDASPLLKISCSDTWLIEQMVIACAVLTFIITLVGVVLSYIYIIRTILKFPSAQQRKKAFSTCSSHMIVVSITYGSCIFIYINPSAKEEVNLNKSVSLLISPISPVLNPFIYTLRNKQVKQALHDSLKKTAFLLRK", "length": 312 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FCJ2-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSRKRNLPQCNPPKKQALSRSSRAELQFPVSRVDRYLREGRYAQRLSSHTPVFLAGVLEYLTANILELAAGEAHSSRKMRIAPEHVQRARSHNETLSSLFQASSVSRGAEEEAEEPLPEAGR", "length": 122 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FD42-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFIILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLNCCITQLFFIHSIFVFESGLLLVMAFDRYVAICYPLRYTTILTHPLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLLLDILLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVCIIILFYGPGIFTALTQRFGRHIPAHIHILLANVCILVPPMLNPIIYGIKTKAIQEQVALILFPKYR", "length": 314 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FH98-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VCHYGNYYSGLSCSCGYGCGYSRCGCNCDYDKCGYRCGYGGYVYGCCHLSCCGRYRPYGFY", "length": 61 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FHY5-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "DTGSCGAIVLTQTPLSLSVSPGEPASISCRSSQSLEEYGKNWLSWYQQKPGQSPRLLIYQATNRASWVPERFSGSGSGTDFTLKISRVEAEDAGVYYCQQYKEFPPTVIQPLTQTPLLGAQLHTWLCVVWGAEGQKL", "length": 137 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FIZ4-1", "protein_name": "Envelope glycoprotein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRPTLSRRHLPTRGGEPKRLRIPLSFASITWFLTLTITPQASSKRLVDSLTSPKPLSLTWLLTDSSTGITINSTQREAPLGTWWPELHVCLRLVIPGLNTMSTPPDILRAYGFYVCPGPPNNEEYCGNPRDFFCKKWSCVTSNDGYWKWPTSRQDRVTFSFVNSYTSYNQFNYGHGRWKDWQRQTQNRQISCSPSDLDYLKISFTEKGKRENIQKWINGMSWGVVYYRGSWGGEGSILTIRLRIETQMEPPVAVGPNKVLTEQGPPIQGQRPSPNPSDFNTTSG", "length": 284 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJ61-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSTKNKHLMKGSKKGPKKKVADPFSKKDWYDGKAPAMLTKKRNIRKTLVTGTQRTKITSDGLKGHVFSSEPCQSAE", "length": 77 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJT7-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKNPEVRKIHSAVFLITYLSTILGNLLIVVTMVTSQSLRSPMYFFLTSLSLMYVTYSSVIAPKMIVDSFSETTAISLEGCMAQLFAEHFFGGVGIILIIVMAYDHYVVCCLLLGGAWVGGSIHATIQLLFICQTPFCGPNVIDCFMCDLFTLLKLACMDTHLLGILVILNSGVMCMAIILILITSYVVILCSLKSYSFEGQHKALSTCGSHLIVVVLFFVPCIFLYVMPVATYPIDKAMAVSFTIVAPMLNPLTCTLRNAEVNNAMRKLWMKQNTLCYH", "length": 279 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKQ6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVQDQDEKKNPMWELGIHKLCLNICEGESGNRLTRAAEVLKQLTGQSPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEIFERHLRVREYKVQEHISLGTKYDPSIGIYSLDFYVVLGRPGFSFADKKHRTGCIGAKHGISKEDAMSWFQQKYDEIILPGK", "length": 163 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKY3-1", "protein_name": "Large ribosomal subunit protein eL27", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGKFVKPGKVVLVLAGRYSGRKAVIVKNTDDGTSDQPYSHALVAGIDRYPRKVTAAMGKKKIAKSSKIQSFVKYSVDIPLHKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKCFFQKLRF", "length": 125 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FLM5-1", "protein_name": "Small ribosomal subunit protein uS14", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGHQQLYWSHLRKFGQGSRSCCVCSNWHGLIRKYSLDMCHQRFCQHMKDPGFIRLD", "length": 56 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FNC8-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLTNYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIALISASYVFILHSVIRMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 301 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP10-1", "protein_name": "Ribosomal protein L19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSVLRLQKRLASSVLRCGKKKVWLDPDETREIANAKSRQQIWKLIKDGLSIQKPGTVHSRARCQKNTLRKGTASAGMPKKSVPERDGNVFKNKRILMEHTHQLKADKARKKLLADQPEARRSKTKEARKRRQERLQAKKEERNRTEVETKFCRLI", "length": 155 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP36-1", "protein_name": "Small ribosomal subunit protein eS24", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQDTASIRTRKFRTNQLLPGKQRVIRVLHPGKATVPKTEIWGKLAKMNKRTPDVIFVFGFRTHFGGGKTTGFGMSHDSLDDYTKTNEPKHKRARHGLYEKSKTSRKQRKERKNRMKKVGGTAKANAGAGQKGGV", "length": 134 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FQE1-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQLFFIHSIFIFESGLLLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDVLLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVSVIILFYGPGFFTTLTQRFGRHIPAHIHILLANVCVLVPPMLNPIIYGIKTKAIREQVAHLLFPKQK", "length": 314 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A9J7F7T0-1", "protein_name": "Protein transport protein Sec61 subunit gamma", "gene_name": "LOC100757015", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDYVMQFVEPSGQFVKDSIWLVKRCTKLDRKEFQKVAMSTAMVFAIMGFTGFVKLIHIPVNNIIVGG", "length": 67 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GY23-1", "protein_name": "Tetratricopeptide repeat protein 16 isoform X2", "gene_name": "Ttc16", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTDSSTEESVNVQTQKIPKLQVPETRETTLQRIFGTSQVFYSVSGVVKPRLTESTVPFRVREYYHQGHHCLEQEDWEMAVLYFSRALHLNPDQVEFYIFRAEAFIQLCDFSSALQNLRRAYSYEPENSKYLERLAFVLYLQGQCLYELCDFQEALYVFLQASDLQPQNPSFSYRCMACLLALNRHQDCLSLVTREVKQGRATADVYILRARIYNFFQKPKLCYQDLRSALLFNPKHPQAKGLLQVMVDQAKKSLQDASILAVQGKLHRALKRISCAIENNPLDPNLFLFRGTLHRRLQQFDPAVEDFLKAMDMVTDSQDNLVQKTQRQLLLTYNDFAVHCYTQGAYQEGVLLLNKAIRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQALELCPKDEGANLRMGVLQEKMGLCEQTRRQFQKAEDHFSAAIKYNPVNAQYYLHRAKNRQLLQNIVGACQDIATVLLLNPKYPKMAPLMAKLFPGMSVEEVLNSHVAQLAKLQLRRMIESGPKASHPQSIVAKRLIERQKAQALMESWNWEQLFTRNPEEEVAPSESLQGKTLREKIEFKREVVEEKKVKILRKVTSLSDSYVDQTSSGSEFSILSPSTLETEVSTMEYKSTSNTAASSAERLLPQYLVTTKYKESLGLSMAPNVTQVSEDLHKSLTENIPDDGPRHHSSKAEATQRPKPRKTEPSQSLGKQRPSQRPSITEATKGPKPRKNRPALSPRQRLRRAKAVQAQNWKPRTNSNSQKTSSLLSNIAVIISSSNEAQDQSPVPSKADDISSYNDSTATSSTNTDSLRLSIHLSKPKYSKDQSPSHNKEEVSPTSNNYAAP", "length": 835 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GZF8-1", "protein_name": "Protein EURL homolog isoform X2", "gene_name": "C4H21orf91", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MIIKRKATVIHHKGTMNEEEQFVNIDLNDDNICSVCKLGTDKETLSFCHICFELNLEGVPKSNLLHTRSLRGHKDCFEKYHLIANQDCSRSKLSKSTYEGVKTLLTKKINWIVQYAQNKDMDLDSECSKNTRHHLFNFRHKPDKKLLPQFDSQVPKYSVKGIAGSTGGLSSYTQRILEQRENTDFGLAILQDSDALWPHKHNQAQKKEETSSGPENVQTQNPRYSREELNSMTLDEVEQLNTKLQQQIQEVFEELTHQVQEKDSLASELHVRHVAIEQLLKNYSKLPCLQVGRAGPRSHLPINN", "length": 304 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7JMJ4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100771730", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDFVNISLVTEFFLVGLTDQPELQMPLFFLFLAVYLITALGNLCLIILTVLNSNLHTPMYFFLFNLSFIDICYCSVFTPQMLMNFILRENIISYMECMAQVFFFCFFVVSECYVLTSMAYDRYMAIYNPLLYNVVMSPNLCLNLMFGSYFIGFSNAVAHTVCMLRLTFCDTNIINHYFCDIPPLLQLSCTSTYVNKLVIFVFASINIIVPTSTILVSYGFILSSIFHISSSEGRSKAFSTCSSHIIAVSLFFGSGALVYFKPSSAVYMNEGKISSVFYTNVVPMLNPLIYSLRNKDIKVALMKSLNSRNL", "length": 310 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AA74KSW7-1", "protein_name": "Predicted gene 3002", "gene_name": "Gm3002", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLNSSKLGVWAAGVPPSSPTLLFRRWVMKVESLISQPMTSGKNELQDHLIFISEKALHKRLFQKENGDEGVTRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSPAESRTWHRPGHDLPQREVLEEEH", "length": 280 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0AAA9RU54-1", "protein_name": "Small integral membrane protein 17", "gene_name": "SMIM17", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MQSLRPEQVRGLLEPERAKTLLPRENKAWEKRAAFAKDWVAVEVGASGCGSDEKDLPSPKTLVPQEWSSVEEDDESEDSQPHWAAALPTSPSCPSQDTGTGSGADLCLQCSSPRTPPWLPWAFSHTIESALPTPPRAWLWSLL", "length": 143 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0AAA9RY85-1", "protein_name": "Core Histone H2A/H2B/H3 domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNMPEPAKSAPAPKKGSKKAVTKAQKKDSKKRKRSRKESYSVYVYKVLKQVHPDTGISSKALGIMNSFLNDIFERITGKTSRLVHYNKRSTITSREIQTTVRLLLPGELAKHAESEGTKAVTSIPALSKYNMPSRC", "length": 136 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0ABK0KVZ2-1", "protein_name": "Eukaryotic translation initiation factor 1", "gene_name": "Eif1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EFGFRSVASAGWGAACPLGLRHVISCGGRAGLEQKARALSSSSTGLFPEGQQRAPPDFSDDICTDKKKNQERGINKWPTTTRNKNYFFVDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLIEIGLAKDDQLKVHGF", "length": 192 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0L002-1", "protein_name": "Oocyte specific homeobox 2 like 1", "gene_name": "Obox2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ILQSVQNTDMIEGPSFLPKFQMSSYTPMDTSSQLPQEPSWNLAFQMGQSPLVTSRTPMQSSPSVPEQNLNWQESQGSSRESSIQMQPGPVMDPGFPTLRSPSGHPSHQRPSRPSSRSGFHVPIEPMALSDKHGGKQTGPVAPRKCRKERTQYSAKQKSVLQEHFAECQYPDKKLCLELATLFGVTENEIKVWFKNNRAKCKQKNVPEALPETNGGPEAVSWSTDFPGSIAVVGCDQGEPMATAILDVDSTPKLNCSQESSLDGNWTYDGAMCCLPEDVLDGNDPVTAGDSGESAPVEAQSDLAAAGAPVAMAVDTQNPEECEDLPLLDEGVWQWMLEDFHQLEDWFTKNYIESPSSASHPLD", "length": 362 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LHI6-1", "protein_name": "CD27 antigen", "gene_name": "Cd27", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAWPPLYWLCMLGTLVGLLATPAPNNCPDRHYWIGAGLCCQMCGPGTFLVKHCDQDRAAAQCDPCIPGTSFSPDYHTRPHCESCRHCNSGFLIRNCTVTANAECTCSKGWQCRDQECTECDPPLNPALTSQPSEAPSPQLPPPTHLPYATEKPSWPPQRQLPDSTVYSRLPSQRPLCSSDCIRIFVTFSSMLLVFVLGGILFFHQRRNHGPNEDSQAVPEELCPYSCPREEEGSVIPIQEDYRKPEPASYP", "length": 251 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LYA6-1", "protein_name": "Prostate and testis expressed 2", "gene_name": "Pate2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLSCLTSELQGSACLCLPSTGSYKHILQHLDLGTMCYKCKKYHLGLCYGLMRSCTLKHRQSCAAENFYILTNRGQSMYHYSRLSCMTNCEDINFLSFERRTELICCKHSSYCNLPMGL", "length": 118 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0M6C3-1", "protein_name": "Prohibitin", "gene_name": "AABR07037878.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNKNIKNSISISVCVGGVGGVRARAHAHAHTSPHACTRVIHAFVMLEVGPRDFVHIKKAFRGIDVKKPVIFDCRSQPRNVPVVTGSKDLQNVNITLRILFRPVTSQLPRIYTSIGLDYAERVLPSITSEILKSVVARFNAEELITQRELVSKQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAETARFVVEKAEHQKAAAIISAEGDAKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSSSQNITYLPVGPSSVGPSVRQSMFLRLPQ", "length": 286 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0AC58FXL6-1", "protein_name": "Cytochrome P450 2X10.2 isoform X2", "gene_name": "cyp2x10.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSDLRGIYSYMLSTVNSLVRDSSLTNFKKEFCVHAYLLSVCIQYQSSVWSSSRSVTMLTALVLLCLGAFLLYLQLRIRRPKNFPPGPAPVPIFGNLLQLNRISPLKDFDKFAQHYGSIYGIYIGSQPAVVLTGQKMIKEALITQAAEFSGRSNNMMFSHVTGGKGVIMADYGESWREHRRFALTTLRNFGLGKKSMEQRILEEVKHICLLLEESAGKSIDPQHLYHQAASNIIASVIFGSRFNYKDAYFQTLITSVEDLTKITIGPWAMLYEIAPVLRIFPLPFQKAFQYFEQITKHVLKVVEEHKTSRVAGEPRDLIDCYLEEMENKSDHRTSFDESQMVTLLFDLFIAGTETTSNTLRTLTLYLMTYTHIQEQCQREIDEVLGARDHVTYEDRNAMHFVQAVIHEGQRVADIAPLSMFHSAKTDTQLRGYSIPKGTIIIPYLSSSLREEGQWKFPHEFNPQNFLNEKGEFVKNDAFMPFSAGPRVCLGENLARMELFLILVTVLRRFRLVWPKDAGEPDFTYIYGGTQSVKPYRVIVEPRMHGEACKFVD", "length": 552 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58J797-1", "protein_name": "Uncharacterized protein isoform X1", "gene_name": "si:dkey-233e3.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANAKQLLKNSLDELVEAELKEFQWYLINDHRDISKAEMEKADRLKTVDKMVSCFGPKGAVKTTVDILRKINQNELAEELENKHKQGNCMSARAEGAVLETCKSPPFDYTNTSRELKKKLKEDYEKILVGNSQTGHKKYLEDIYTDLYVVENETGGRERQHEVIQMESKHNQQDRPLKCNDMFKVQPDTGRKHRRILTLGIAGVGKTVSVNKFILDWAEGKDNQEIVFIFPLPFRRLNLIKEEKYSLIGLLNKYFFSISGGLSSLPEKQGKVMFIFDGLDEYRFKLNFKKDDGFTDVNKEMTVSEIITNLLKRHLVPSSLMWITSRPAASSLIPRDLIDQVTEVRGFIDEQKEHYFIKNSSPEVARNIIGHIKKSRSLYIMCHIPVFCLISLTVLQPLLGQESNEKTPTTLTGMYINFLLSQKQQMKEKYRNDTESEANACSFDEIVLKLGKLAFKQLQKGQLIFYKTDLEKCGLDVRQGSVFSGLCTRMFQEENHYSGEQVYSFVHLSVQEFIAALYVFFTYKNKKANLFLDSWKKELKWKLSEKPLFKLHTAAVKKTLQSKNGHLDLFLRFLMGLSLESNQSDMKELLPWLKLKTGMIKDTTDYIKKKIEEENSAERTINLFHCLNELNDDFVEELQKSLCSGNLTAQDLSSAQWSGLVFVLLMSEETQEKFELQKYRRSDEALMRLIPVVKNTTRALLQCCNLTAQSCESLSSALQSSNCVLRELDLSNNDLQDSGVNLLSNGLKSPKCKLEILRLSGCMVTEEGCGFLSSALTSNPSHLRELDLSYNHPGDSGLKLLSQKLEDPNYTLNKLNLDHGGEKWFTAGLHKYACFLTLAPNTAHIELRLSEENRRVTRVGERQQYPDHPDRFDHHAHVLCRESVCGRCYWEIEMNAGDRVDIAVSYKSIKRKGRGYECVLGQNAQSWALICYVNRVAFRHNMIETRLPVKLMSRRIGVFVDHSAGTLIFHNIYRDSMSLIHSVQTTFTEPLYPGFWVEYGSSVKLC", "length": 1006 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58JHM1-1", "protein_name": "Phoenix isoform X1", "gene_name": "pho", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDLRSKGDTSVGEVMEADPRAELIFETPPPDVVSSINACFEEIDSALKIRRDPSVHSPPSDSDSESLFITQSVTKVVHTKRRLRSSKKPDSISDDSGYVRERRLSENQQTECEEESRSLRSSRRKRSKWEMYASARKATFPFLMKSLKTQHLPIRKHQILENSEVGGFFKCIKKIKTGSVKMGKVISSHLFQSPISDSSEEEDQNSEHDVISVDKALFVPGYKRGINFKWLPDFIRERRTLENYLSNGVDKEKKTEQIIEYRQRNQHPQRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDLEIAECAENSHEGHKVVIEETQRQTVEEASAHLEHEDDLNCKVVEYRKRKRHPKRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDIESVECAENSHEDHNVVIEETQRQTVEEASAHLEHEDDLNCKNQPDVDQPNESNFIGPPQEGDISTQSDTQQTDSDIGSVDLFSPLNSPKRDDQIPNTTSITANVEENDQDSDVTQIESEGQHVSTFTQETQKCFANEEYDSDETHIDTESLSRFKPRTPNKQFTSTKHPEIPQFRVQSPKPPSRQAETVNVQLSPKHLPLSNVPLSEVPISPCESAIVGRQKTMVETETDSPMFKITGPSFLKRKRKRTKDKNAAADFKQHDTNGDVGQMVSCPGDDITGLKAVPIENIEACGVEHEMAIGEQTEELGLKSKELLEESVLSTVNSVSTKSKREKMKKYKVKECEAVENQLVETSKKAKKKKKDKERIATSYPEENNLTNIQSNEGFDSAELRVKEVNQSSQSLNTDQPTCVQTSEEITGETELKKKTTRHETDDPLYESVGLDVTLASQFDVGLRIDEQQEGLVTEEAERDERLQGKAMKVAKGKKKIQDTSFQVDHDIGLDKQRSDSGAKPANLDLDGLESLTIKKKKKKKKKHKLKEKTDPKLDFDFDHNVQFFQTDRLQTTDSVLLDSTHTNKQKKKKLKCQNDTDQSSDLKQLHVVGSKLQTIDLPKTDKHMERTGVSSSDALLEHMDDRTLGMRENNTIQTDQIEHLQTSEEVTRCSSPRLSSDKKREKTSVHPNLDASSVFQFDGFKANEDQAITQNTTKEKQISSEQLENNLVGPPSQVENIANVNSSVLLDHTHMNTLREGQLKEQTYKELALAFGLKQLCIVVNKLKTTDLPKTNKNMEGTGVGSSDELLKHTDDRTLETRENNTIQTNQIEHLQTSEKVERHSSPRVTRLSFAKKWMKTSVDSNLDASSGSQFDGLNSMAKEDWTFSQNMDLPLKRTKNKQKDKERTGVSSDALLKRMDDRPPEMRKKNTIQTNQIEYLQTSEKVTRRSSPRLTRLSLAKKMEKTSVDPNLDASSGSQFDGLKEASKEDRTAPRNSIEEKQSDAISSEGLENNPAHLVSTNKSDNTSPSSQVDNIVGLQSDANSVLLDHTHTDKQKKKKIKHKLIEQTEKELTSEVEDNVQPFQFIELRAMDLPSKRITNKKLKDRKRTGVSSSDAVLKHIDDGPSDMRENNSIQTDKIEHLQTSEEMTRCPSPRLSSDKKRKKKYVDTNLDASSGFQFNWSNGMAKEYSKNSTNISSLDNMHTSKQKKKKKQKLKEQKNVESVGDNVYSLEPDQFSGLQITEIKTKKKDKKRTKQANVEENDLKGILSNKAFKASQTYQLEHIQTSEEIKGRSPNAASKSAKKKKKKKNETKNPQYESVNLDLSLAKEDRTTTQNHTEETQGDGNAVEHLEMNPAGLIKVSKKKKKRENAGIVQLDNIIGLQSGSSTDVKSSVLSDSTDTNKHKKKKRKTLKEQENVEAEGDDVQSVEPDPFSGLQITEMTTKKKRKHKRCEEQRCLRGVSSHEAFKAPPTNLLQHIQTSEEISQCQSPNVAALENGGSPYQLENITEMQPGNSIDINSSEILYSTCTHKQKWKKLKQQENVEADANDVHSAELNLFSELKISEPTTKKKKHKKCVEKCALKDISSNEGIKAPQTSQLEHVQTSKEITQCQSPNAATLKSEKKKKQKRDETEVPQYLDASSVSQFDDVTRLKKQAKVDRTTTQNSSEETQNDDISSKQLEMNPAHLIKVSKRKKKREKAGSPYKVDKIVGLQSGNFTDVNFSQLSDSKRTDKQKKKKKIKLKEQENAEADVDDVHSVELDQFSGLQITKPTTKKKRKHKRCVEESGLRDISSNEAYKAPQTNQLEHIQTSEEITPFQAPNVAALKSAKKKKKKRDKTVEPQCLDASSVSQFDDVKTRAKEDQTLTPNSSKETQGDDSAVECLETNPAGLMKVSKKKKKRENAASPYKVDNIVGLESGNSADVSSSVPSDSTDTNKHKKKKRKKLKKQEIVEADLQTSEEIIQCQSPNVATLKSVKKKKDETKEHQRLDVSSVSQFDDVSRLKKRAKEDRTTIQNSSEETQSADISSEQLEINPAHLIKVSKRKKKRENGRSPSQVGNIVGLQSGNFTDISSSVLSDSTRTDKQKSKQKKKLKEQENVEADANDFHSAEPDQFSGLQITEMTTKKKKKHKRCVEESGLRDISSNYAFKAPQTNQLEHVQTSEEITQCQSPNVAALKSEKKKKNKRDKTDKPQYLDESSVSQFDDVKKRAKADRTTTHNSSEETQKDNISSECLELNPAHLMKISKRKRENKSLGLLSENTADLNSSSLLDGTDTDKHKKKKRKKLEGQENVEADVDDVHSAEPDQFSELQIPEMTTKKKKKHKRCVEESGLKDISSNEALKALQTNQLEHIETSEEMTIKTVKKEKKKRDATEEPHYKSVDLDVSPTESTTEAKLNPTKHKKKRKQSFSGSHDAHEAPERKRKKDRN", "length": 2809 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0MGZ5-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 1-B", "gene_name": "hs6st1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNDTERNMVERTSKFLLIVVGSVFFMLILYQYVAPGVINFGSPHGYLLGEEDMTIFPTPDPHYVKKYYFPIKDLERKIDFEIKGEDVIVFLHIQKTGGTTFGRHLVQNVRLELPCDCRPGQKKCTCYRPNRKETWLFSRFSTGWSCGLHADWTELTNCVPGVLNKRESKSKKMRKFYYITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQQFMDCPYNLANNRQVRMLADLSLVGCYNLSTVPEKRRSQLLLESAKKNLRDMAFYGLTEFQRKTQYLFERTFHLKFIRPFMQYNSTRAAGVDLDNDTIQRIEELNDLDMKLYDYAKDLFQQRYQYKHMLDRREQRLLRGHASFHSPFREDGAGGEGTARLPTEDYMNHIINGW", "length": 407 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A1EC97-1", "protein_name": "Dual specificity phosphatase 14", "gene_name": "Dusp14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSRGHSTLPRTLMAPRMISEGDIGGIAQITSSLFLGRASVASNRHLLQARGITCVVNATIEIPNFNWPQFEYVKVPLADIPHAPIRLYFDTVADKIHSVSKKHGATLVHCAAGVSRSATLCIAYLMKFHNLCLLEAYNWVKARRPVIRPNLGFWRQLIDYESQLFGKSSVKMVQTPYGIIPDVYEKESRHLMPYWGI", "length": 198 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A1XQX2-1", "protein_name": "Neurexin-1b", "gene_name": "nrxn1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMILHLGAHLLFIGLIVCKANAGSSLRFTGSDEQWVAFPMWNACCESEMSFSVKTTHLNGLLVYFDDEGFCDFLELHVHVGKLRLCFSIFCAESTCVLSDVAINDNRWHSVSIMRNFRNTTLIVDDEVKWEEVKSKRRDMTVFSHLFLGGIPSELRSVSLQLTSKTVKDHTSFTGWIMDVKVNDSEPAIISSAGVHEDLCGSENTCLNGGVCSVVEDKPTCDCSQTGYQGKDCSEGLAHLMMLDRGMEEYVATFRGSEYFCYDLSLNPIQSSSDEITLSFRTLQRNGLMLHTGKIADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNEWHDVKVLRNLRQHSGVGYAMVTISVDGILTTTGYTQEEYTMLGSDDFLYVGGSPSTADLPGSPVSNNFMGCLREVVYKNNDAELELSRLAYQGDPKLQIHGVVAFKCESVATLDAITFETPESFLTLPKWNAKKSGSISFDFRTTEPNGLLLFSCGRAKQHNKEAKSPVTLKVDFFAIEMLDGLLYLLLDMGSGTTKTLALNKKVNDGEWYHVDFQRDGKSGTISINSVRTPYLCPGDSELLDLDDPLYLGGVPESSSGTVFPTGAWSALLNYGYVGCVRDLFIDGRSVDVRRAAELQRAAGVKPSCGKEPSGKCVSEPCLNRGVCREGWSRYICDCTGTGFLGHSCERDATILSFDGSKFLKVQFSAAMHTEAEDVSLRFRSLRAYGVLMASTSTHTTDTLRLELEAGRVRLTVNLDCNRINCTTSKGPESLFAGQNLNDDEWHTVRVIRRGKSLKLSVDDLPTVDGEIPGDHTQLEFHNIETGIITGKRQLPTMPSNFIGHLQSLMFNGKPYIDLCKNGDIDYCQTNAPIGFKSIIADPVTFKSCSSYVTLPSLQAYYYMYLFFQFKTTSADGLILYNSGDGNDFIAVELVKGYLHYISDLGNGAHLIKGNSIKPLNDNHWHNVMISRDPNNLHTVRIDTKTTSQTTLGAKNLDLKGDLFVGGVPEQMYKDLPKLVHAKEGFQGCLASVDLNGRLPDLMTEALVCIGQIERGCEGPSSSCEEDSCANQGVCLQQWENFTCDCSMTTYAGPLCADPGSTYVFGRQGGVITYSWPPHDRPSTRVDRLALGFITLMEDATLVRVDSSAGLGDYLKLHIVKGNVVAVFNVGTYDINIEENGKLVNDGNYHIVRLTRSGGNATLQVDDLPVIERFPPGHIDSHRLGTGRLPYRRLVEESLPKNGRQLTIFNSQMTIRIGGWQKQQVSGFQGQMSGFYYNGLKVFSMAADGDPNVRMEGSVRLVGELQSSSTPHGGATVYQSSVTEISSTTSNTITITYSTPADEQQTTDELLVASAECPSDDEDIDPCEPSSGTLCCFVPPAGPTGPAISSFPGPAEVFRESNGTTGMVVGIVAGAALCILILLYAMYKYRNRDEGSYHVDESRNYICNSNGAALKEKNTADDDSGSKSKKNKNKEYYV", "length": 1470 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A2A7I1-1", "protein_name": "Zinc finger protein 978", "gene_name": "Zfp978", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFAPHQESGRRTTKRMSASLENTAQCLLTFKDVFLDFSSEEWECLNFAQRTLYMDVMLENYNNLLFVENHCICGNYEKEKVVEQDTQHIFNEHGHIQEKSFKCNESSNIIHESSESTPHKTNHRDATLQSSNLKRHKTGTTKQVCTYKDCVNCLKGSSIISLNQGTHVEKKEHNRNKNLDEVLVSKHKPIVRQNNSEMNTYTCGEFDKCFTQSDNLQSQQRIYPGKKSYKYSESDKCFTQPSHLSIHHTIHSGEKPYKCSECDKCFTDKCTLRKHQRIHTGEKPYKCNECDKCFTDKGSLRVHQRIHTGEKPYKCSECDKCFTQTSHLSIHRRIH", "length": 335 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A8N2-1", "protein_name": "PRAME like 25", "gene_name": "Pramel25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICGHCPDQDESLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPEWPFPYLSLGKQINNCNLETLKAILEGLDILLAQKVQTSRCKLRVINWRDHDLNLWAGSHEGEGLSEFTTEKQPIENSPGCEVKKELKVMTEVLRMKGRLDESTTYLLQWAQQRTDSINLFCRKLVIEGLTKASVIEIFKTVHADCIQELILRRICIEELAFLNPYLKLMKRLFTLTLDHIIGTFSFGDSEKLDEEIIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDYLPYCLNICELKHLHLSDICLRDLLLEPLGFLLERVGDTLKILELESCCIVDFQFSALLPALSQCSHLREVTFYDNNFSLPFLKQLLHHTALLSQLISECYPAPLECYDDSGVILTHRLESFCPELLDILKAKRQLQSVSFETTQCSKCGGCYIYDQETQCCHFVELLLA", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A9Q9-1", "protein_name": "MAGE family member B5B", "gene_name": "Mageb5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRGQKNKHHRNRLKNKKHNQEKVHPQKDESQEKGHHKRDDFQDHKEARDNAAVEEKSSCSSPSVPGETLEKPPASKTSSDAGWLSCVSSPATVCGDELEFDDGTYFHCGGNSLYSEYRTCQENPCKHCLDMYVNLVEQYVLYKFKMKKLIDRNKLIDLIEPKYRYNFSDIFKRAFENIEIVFAASVIEIDSTNHVYDLVSKLKLPNKGRVCPGRGLPKTGLLMTILAMIFMNGTSASEEDIWKFLNYMQVYPGRKHFIYREPRKLITQDFVKLKYLEYKQISLSDPPCYRFQWGPKAYTETTKMKVLEFMAKGSGVEPSTFSVQYTEALREENQKTKIRKWYPILAQKHCPGHSHQHVQKVMKPQ", "length": 366 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ADW8-1", "protein_name": "Predicted gene 15128", "gene_name": "Gm15128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANREDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHDSRRSRNRFRRAPVQSERSHVYSGRTNNYTDRPQHDLSNRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIAHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESFDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW6-1", "protein_name": "PRAME like 22", "gene_name": "Pramel22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHRLLREEALAISSLKDLPNMLFPVLFEEAFIFGYTKILKAMIPEWPFPYLSIAVLIDNCNLESLKAVLEGLDILLAQKVHSSRCKLKEISWRDTNHGLDGIRPGSHEVEGLSEFMEQKHPNCVEKKELKVTTELSVMNGRLNESDTYLLEWTQQRKDSIHLFCRKLVIQSLTKATVIEIFKIVNADCIPELELCSLCLEDLAFLNPYLRQMDNLLELTLDHITDSLSIGDSEMLEERMITLVSQLPTFPCLQKLCINDVYFIYGNLKEFLGCLKKPLVSFCISNCELSQSDLDYLPYCLNIFELKCLYIINIHLQYLCLEPLGFLLESVRHTLGCLALKSCNMGEPHFKSLLPALSQCFHLTDVNFQENELSLLSLKQLLQHTSKLTQLSYEMYPAPHECYDDRGVILSHRIEQFCPEVLDMLRAKRQPKDINFVTTQCSKCGIYYVYDLETQRCRFLK", "length": 460 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW7-1", "protein_name": "PRAME like 23", "gene_name": "Pramel23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNVNSPPTLMKLASQRLLREEALAISALKDLPNMLFPVMFEEAFINGHTKILKAMIPLWPFPYFSLGMMIKNLTLDTLKAVLQEIDILISKVVHSSRCKLKEIKWKNTDYGLQGIWPGSHEFDGLSEFMEQKQPDCGVKKELKVITHLKLMEGSLDECATYLLQWAQQRKDSIHLCCRKLKIQGSINATVIEIFKIVHADCIQELELCCLCLEDLDFLNPYLKQINNLIRLKLDEIKGTVSMGESRNIDEEKVITLISQLPTLQHLEKLCINDVSFIEGNLKECLRCLKKTLEILCITNCYLLQSDLDYLPYCLNILELKCLDFSNIPLSHLFLEHLRFLFERVRHTLECPILKSCEMGESQFNSLLPAISQCCQLTEVNFYDNELSLIFLKKFLHHTAKLSQLTYELYPAPLECYDNRDIILSHRLENFCPELLNILRAKKTAQGGHLCYNPML", "length": 455 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AHC7-1", "protein_name": "SSX member B14", "gene_name": "Ssxb14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVISCEKIPMEVLHKPKNICKAFQDISTYFSGEEWGKLTEWQKSAYMYMKRNYTRMTGVTVNQPVFMSGKEQAKQSLVKGIEVHDSEDECFEESFGVTPRKRMKLTSVTISIHNVEGSLASGENDSNLAETDGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 168 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AK42-1", "protein_name": "Pre-mRNA-splicing factor CWC22 homolog", "gene_name": "Cwc22rt5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKSSVAHMKQSSGHNRRETHSSYCRSSSPEDRYTEQERFPRDRDYSDYSRSDYERSRRGYSYDDSMESRSRDREKRRERERDADHRKRPWKSPSPDRSPARGIRQSSPQEEPTWKKKKDELDPLLTRTGGAYIPPAKLRMMQEQITDKSSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLAQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDSDSNTDQGAGSSEDEEEEEEEEEEEEEEGEDEEGGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFAESQTKELCNMILDCCAQQRTYENFFGLLAGRFCMLEKEYMESFESIFKEQYDTIHRLETNKLRNVAKVFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPEAEQKKTALTSSSSESSSASDSSDSDSDSSESSSESSSEASDSSSSSSTQSSTSAKGTRKKRQGKARGEEVDKLARGHQALERRQGGREDQRHQEGRTERARSERHRAQNSRDADWRDSLAKHIDDRSHENSHSRVGNGREQGSHREPEDRHGEPKKKQREKRFFL", "length": 830 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE0-1", "protein_name": "Reproductive homeobox 2F", "gene_name": "Rhox2f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYLLDVGPEEDEENANGVKTLMVLLAGDGRNEGESGRGLPGSGASAAEGYRAGEISAGGPAAQVADLMDDSNQEDLGATACDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHLWRHSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE1-1", "protein_name": "Reproductive homeobox 3F", "gene_name": "Rhox3f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSMSNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDNTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEALRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREKYRWYKRL", "length": 215 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ASJ1-1", "protein_name": "PRAME like 14", "gene_name": "Pramel14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDLEAPPTLLQLAAQCTVRKEVLTISVLQNLPMKLFPPLFKEADILRKAKMIKLLVEYWPYPSLLVGLLIDKTNLETFQAILEGVGTWLKRKYRPRMGKLQVVDLRNGHHDFWDMLAGREGGDQLVETMPEKQEVEGHSRRQRLRVFSDLSFKSSRHEDKQQTHLLQWAKDREGFLHLCCEKLEIGALGVSKVKKVLKLLQPEFIKELELNTVGNLSKLTKLVPCISKMRNLQKLMLVRIFGRHTYTPLEERNVTKILSLFPKLSYLQHLTIDDVYFLRDHMNELFRYLEAPLLSLTITLCQISQSDLESFSQHWNYGQLKHLCLKGVSLSTLNVTPLKFFLESVADTLQTLELEDCRMKDSHLRILLPALTKCTRLTSINFYDNNISRDVLQDLLHRTANMSQLTMELYPAPVEVYNEWSYVQVERFSQLCAELMNTLITVRRPKSVCFGTYSCYDCDTHCIYGNQTTFCECLE", "length": 475 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ATW2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADIHNVTEFFFLGLSSNQEVQRVCFVIFLFLYMAIVLGNLLMVVIVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLIVDLLAEKKSISVWGCMAQLFFMHFFGGIEMFLLMMMAYDRYVAICKPLHYTSIMNRQVCTVLVGMAWMGGFVHSLAQVLLIFRLPFCGPNIIDHYFCDVLPVLKLVCSDTFLIGLLIVVNGGTLTVISFVVLLSSYAVILFHLRTQSAEGRRKALSTCGSHVTVVVIFFAPCVFIYLRPTATLPIDKMVTVFYTVITPLLNPIIYSLRNAEVKKVIKILCTRATKVDKK", "length": 309 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWL9-1", "protein_name": "Reproductive homeobox 2C", "gene_name": "Rhox2c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSVNYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGASAAEGYRAGELSAGGLAAPVADLMDNSNQEDLGATGCDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHGWQQSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWM0-1", "protein_name": "Reproductive homeobox 3C", "gene_name": "Rhox3c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVERAGRNLFQVNGHRSALLPELPQDYHRASRSVYGCETKMDSTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BED8-1", "protein_name": "Predicted gene, 58953", "gene_name": "Samt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQFVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEE3-1", "protein_name": "Spermatogenesis associated multipass transmembrane protein 1d", "gene_name": "Samt1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQLVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI6-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 10", "gene_name": "Msantd5f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLAWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI8-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 8", "gene_name": "Msantd5f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLVWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFR3-1", "protein_name": "Histone H2A", "gene_name": "H2al1j", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTHSQRGEFPLSLVDRFLPEGNHSGRLSSSAPVILDSVLEYLSSNILELAGEVAYTTGRKRIAPEDVGLVVQNNEQLCQLFKPGATSVFDPPEPDDN", "length": 109 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFZ7-1", "protein_name": "BTB domain containing 35, family member 9", "gene_name": "Btbd35f11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BH64-1", "protein_name": "Secretoglobin, family 1B, member 30", "gene_name": "Scgb1b30", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLTGALLLLGAALLLTSEGDCGLCPVLQKKVHKFFDGTTEEYVEYLKQYNNDPLVLENAANIKKCSDRMLAEEDKTQATNFINKVTGSRSC", "length": 92 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BHG6-1", "protein_name": "BTB domain containing 35, family member 7", "gene_name": "Btbd35f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSFGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI40-1", "protein_name": "X-linked lymphocyte-regulated 4A", "gene_name": "Xlr4a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSDDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKTVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI45-1", "protein_name": "X-linked lymphocyte-regulated 5A", "gene_name": "Xlr5a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKKKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQHTIVEKEISKVQNRVIMETQDQDISMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI50-1", "protein_name": "X-linked lymphocyte-regulated 5B", "gene_name": "Xlr5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKRKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQQTIVEKEISKVQNRVIMETQDQDIAMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI74-1", "protein_name": "SSX member B6", "gene_name": "Ssxb6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSSCEKIPMEVLYEPKNICKAFQDISTYFSDEEWVKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMRGKEQAKQSLVEGIEIHDSDDECFEGSFGVTPIKRMKLTSVTISIHNVEGSHDSGENDSNLAETGGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BIM8-1", "protein_name": "Major urinary protein 18", "gene_name": "Mup18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 181 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CEK7-1", "protein_name": "Major urinary protein 14", "gene_name": "Mup14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG71-1", "protein_name": "BTB domain containing 35, family member 19", "gene_name": "Btbd35f20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLQPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKMRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTLKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG92-1", "protein_name": "BTB domain containing 35, family member 10", "gene_name": "Btbd35f10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CGC2-1", "protein_name": "BTB domain containing 35, family member 3", "gene_name": "Btbd35f4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQRMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 496 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A3KG49-1", "protein_name": "PWWP domain containing 4C", "gene_name": "Pwwp4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSEYVLCGWKSQLCPARVLSRPRTPAHSKRRGVPFLEVQILPVGEKRRVRSSKVRPLAKSEIISINSLAGKESRGRGSPGQTRASRRALKVALDGLGEGSSFFQGGRAGSRRTSTLAPKVPKEQASSSSSSLGQRLRLRLRQLLPLSLCQRLHLHLRLRLHLHMHLCLQGRNQKGQGLSQRSPGKRVRPDPGPVMMGSQNVPAVPVGEAQAHTAAGLPRSEVEGDVLRGTRVWPSYSKKTPLGKAGGNPGKRKPGTGKRKLRSLSAPASRKGTRSKTEQQAASGPPRHISISPKALKQRVRCAGLEIRAAGAQRKTALAENKDHPGLGTPKPDSKRASAACMPPVLRLRRSLRIASRKKKTHVLCALCGLPEWEPQVHSKVTNTRFKRRGARVQKDAKATNVVSAQEPSTIEQGTLVWFKFQDLPFWPAVVKSVSKIDKMARVLLIEGNMQFERRGIRVPLRKLKHLDCGEKVSLVRRASRLYAQGINWCFSVIDHYREGLSRGSLLGSFMDYYTTQASYPLRRAVQEGDLHIDFPKVSYAELEDWEEETALGGKGPYKKLLPDRMRAAWDRANQKLVDFIVKRKGADQHLLDIVKGRKPSRWLDDLWKSKREVFCIETYLEDDDQLHLVARHLQEVAKEADEALLSLARGDKVRFTMEVLFPEAIIYSIAALDELSYKEAEEKYLRGPPVHYREKELFDKTILKAARKRSAARIRAARDPPVPTP", "length": 728 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A5WVZ0-1", "protein_name": "2.7.1.138", "gene_name": "cerk", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEKQSTLLCSELSVQRRLYEVTLNCAILAWKDVQNAKKHTGRAIYGAVKAGSHCVPVCEIIAVQEKEDDSPCKDTGKWQKVPQSPTDSCQHAFTVYYVERTRQHCWRCSNVTFQYSEHSLCLLWIQTIKEQLALLSAQSTEELAGVHQPLRRKTTRQADLRPQSGPHLFPGFHFHRRDWPHSFSAHPSELRFYIIADGKEPVMKCTGDCFSPRVQLHHLMQLIDGLHQASRKMQFNCQMNIMMFLPPLYHQPGNNGFSLFVSIVTEHANHARDHLKAEADLKKYDGVVCVGGDGMFSEIMHGLVSRTQQDAGVDENSTEETLIPCGLRIGIIPAGSTDCICYATVGSNDPVTSALHMVVGDSQPMDVCSVHSDDRFLRYSVSLLGYGFYGDVLKDSERKRWMGPARYNISGVKTFLSHRYYEGTVSFLPAEENLGTPRDKVQCRSGCSICRRSSSDKLLSKEDEASVSDVDCRDTWTVIRGKFLAINAANMSCACPRSPKGLSPSAHLADGTTDLILVRKCSRVDFLRHLLRHTNKKDQFDHSFVEVYRVKQFRFTPRFQECGSEMDLRESRAGGKHFFCQICRENRACGCMSSQSNWNCDGEILPHTAIQVRVHCQLIKLFARGIEEQPVFEDLYAHCQLNNPPNHEP", "length": 649 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A5WWD5-1", "protein_name": "alpha-1,2-Mannosidase", "gene_name": "man1b1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLPSTRKDFVSLTLSESGSYSNSKQWRRQSCWRKWKQLSRLQRSLILLTLMLLLVCGIATSPTLIGHWRGMNGDDVKNSFVVDLKNEYRSILPEPPSERKDFDRRGAFGLEKLLQGKVNVSGVLGDQNHGLDLKNADKGSEGQKPIISWRGAVIEEEQASDTDTKDTENQGDPASLALAESRLEAVREAFRHAWKGYKDFAWGHDELKPISKSYGEWFGLGLTLIDALDTMWILGLQEEFAEAREWVAKELSFDKNVDVNLFESTIRILGGLLSTYHLTGDNLFLDKAKEIGFRLMPAFSTPSKIPYSDVNIGKGTAHPPRWTSDSTVAEVTSIQLEFRELSRLTGDPKYKLAVMEVMKQVHKLDGKQDGLVPMFINTNNGLFTHQGIYTLGARADSYYEYLLKQWIQGGRIEQELLEDYLQAVEGVKKNLLKKSTPLGLTFVGELSHGHFSPKMDHLVCFLPGTLALGVHYGLPADHMELAKQLIETCYQMYAQMETGLSPEIAHFNMHDGSTQDVDVKIADRHNLLRPETVESLFYLYRLTRDKKYQQWGWEILQNFNKYTRVPTGGYTSINNVRDPSYTSPRDKMESFFLGETLKYFYLLFSEDPTLISLDKYVFNTEAHPLPVWPQAE", "length": 632 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A6NCW0-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 3", "gene_name": "USP17L3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALASGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NCW7-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4", "gene_name": "USP17L4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGYYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATEESTLDHWKFPQEQNKMKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSMNSTDQESMNTGTLASLQGRTRRSKGKNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NDS4-1", "protein_name": "TBC1 domain family member 3B", "gene_name": "TBC1D3B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDISGTLRKHMFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQSKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGRKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NJZ7-1", "protein_name": "RIMS-binding protein 3C", "gene_name": "RIMBP3C", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAKDSPSPLGASPKKPGCSSPAAAVLENQRRELEKLRAELEAERAGWRAERRRFAARERQLREEAERERRQLADRLRSKWEAQRSRELRQLQEEMQREREAEIRQLLRWKEAEQRQLQQLLHRERDGVVRQARELQRQLAEELVNRGHCSRPGASEVSAAQCRCRLQEVLAQLRWQTDGEQAARIRYLQAALEVERQLFLKYILAHFRGHPALSGSPDPQAVHSLEEPLPQTSSGSCHAPKPACQLGSLDSLSAEVGVRSRSLGLVSSACSSSPDGLLSTHASSLDCFAPACSRSLDSTRSLPKASKSEERPSSPDTSTPGSRRLSPPPSPLPPPPPPSAHRKLSNPRGGEGSESQPCEVLTPSPPGLGHHELIKLNWLLAKALWVLARRCYTLQEENKQLRRAGCPYQADEKVKRLKVKRAELTGLARRLADRARELQETNLRAVSAPIPGESCAGLELCQVFARQRARDLSEQASAPLAKDKQIEELRQECHLLQARVASGPCSDLHTGRGGPCTQWLNVRDLDRLQRESQREVLRLQRQLMLQQGNGGAWPEAGGQSATCEEVRRQMLALERELDQRRRECQELGTQAAPARRRGEEAETQLQAALLKNAWLAEENGRLQAKTDWVRKVEAENSEVRGHLGRACQERDASGLIAEQLLQQAARGQDRQQQLQRDPQKALCDLHPSWKEIQALQCRPGHPPEQPWETSQMPESQVKGSRRPKFHARPEDYAVSQPNRDIQEKREASLEESPVALGESASVPQVSETVPASQPLSKKTSSQSNSSSEGSMWATVPSSPTLDRDTASEVDDLEPDSVSLALEMGGSAAPAAPKLKIFMAQYNYNPFEGPNDHPEGELPLTAGDYIYIFGDMDEDGFYEGELDDGRRGLVPSNFVEQIPDSYIPGCLPAKSPDLGPSQLPAGQDEALEEDSLLSGKAQGMVDRGLCQMVRVGSKTEVATEILDTKTEACQLGLLQSMGKQGLSRPLLGTKGVLRMAPMQLHLQNVTATSANITWVYSSHRHPHVVYLDDREHALTPAGVSCYTFQGLCPGTHYRVRVEVRLPWDLLQVYWGTMSSTVTFDTLLAGPPYPPLDVLVERHASPGVLVVSWLPVTIDSAGSSNGVQVTGYAVYADGLKVCEVADATAGSTVLEFSQLQVPLTWQKVSVRTMSLCGESLDSVPAQIPEDFFMCHRWPETPPFSYTCGDPSTYRVTFPVCPQKLSLAPPSAKASPHNPGSCGEPQAKFLEAFFEEPPRRQSPVSNLGSEGECPSSGAGSQAQELAEAWEGCRKDLLFQKSPQNHRPPSVSDQPGEKENCYQHMGTSKSPAPGFIHLRTECGPRKEPCQEKAALERVLRQKQDAQGFTPPQLGASQQYASDFHNVLKEEQEALCLDLRGTERREERREPEPHSRQGQALGVKRGCQLHEPSSALCPAPSAKVIKMPRGGPQQLGTGANTPARVFVALSDYNPLVMSANLKAAEEELVFQKRQLLRVWGSQDTHDFYLSECNRQVGNIPGRLVAEMEVGTEQTDRRWRSPAQGHLPSVAHLEDFQGLIIPQGSSLVLQGNSKRLPLWTPKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYYGELGGHRGLVPAHLLDHMSLHGH", "length": 1639 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A7TZG3-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 9", "gene_name": "Skint9", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSASCLPGFFMSFLLLQNTVLTQAMRSDIKINIQVPDTEGLLLECTSGSLIPPAEMTWRDSNGNIIPHSTAFNSQDRDGLLYLKSSILLKNRAKGPITCSIYNVTTNQEKKRSIVLPDALFKSENMSLMSNKFSCPSIYLITIIFLNFLRGILVFCCLRRKPVCFRNLMSTVMEALYSKMGVCCLLIWECLLLVLYIAFLPIYVSFRSRAFLLDDTYPLYTNWLWNICIILTVIMVLFPGLILCLLWTLNCYGQVSSLPPTSMELSTKDSEQNSSKSDDSQENYDVNCKILETCESKIFSQHQESCEDDTASTLFIS", "length": 319 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A7XV14-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 11", "gene_name": "Skint11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEPSASCLPGFFMVCILLKITVLTQVMSLDIQINTQIPDTEEGVLVECTAESLFPPAEMTWRDSKGNIIPPSSTFDSQDRAGLLCLKSTILLKNRTEGPITCSIYNKTTNQEKRRSIILSDVLFRPQYMSLMSNNLLYLGIYLIFILFLNFLKGILFCLTKRLVHFRKRMIKIKKVWSNKTRACCPLIWEFLEIVLFIAFLPLYLMFRIRVFTLDEAHILYNNWLWKVCKTLIAMMILFTVLILFLLWTLNRYGKMPCLSSMNIDVSTHDAEQNSSKSAKFQENYDVAGQMILETYEETIFCQHQESCEEYNYDPLLLSSLDALGTCEDEKFSQHQESFEEDEDLQSFSDFKIELYSKLGNLTH", "length": 364 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B0BMZ6-1", "protein_name": "Cilia- and flagella-associated protein 119", "gene_name": "Cfap119", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MITPRSSQSLEMKVQTELEHSPKLQEEPDRSPSLVDSSVIRIGTDEQNESPAEATSSPVEVAEDPGANLFPPPLPQPRICMWKYLDIHSMHRLEKAATVEEMREVLAELLELGGPEQSLRDAIILDLFSHALIFCRQQGFSLEQTSAACALLQDLHKACVATPLGNVEECYRYFTSVLFCHGVRRPPFSIDLFKEEQLLALADYVVNTYFRHFKLYKYVFTPQVRLDLSLSYMGLQSLHLWPEEKEDEEATVEQAATPQEEEPEAVTEAEQQPSEVCILQTYIKCQLNKELRQLQQLVEERLKESEERLSNRLAALERPYQTPPSKGKSKAK", "length": 332 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B0G0Z9-1", "protein_name": "Probable polyketide synthase 6", "gene_name": "pks6", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLKNIDLIEKGVAIVGIGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSEASLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGASNIDYQHTNKHQDSVLKNAIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSDISIVGGVNLILDVEMTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECVGVVVLKNLQDAIKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSAPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTAIQIYSKSNYLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQSTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNLNIELPLYQWSDELYFAQNQVLEQHRKGGPPIDHLGLSNSYYSPFKNSYKTLIDINYKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDHKSNEWIQSSNSNFQLLDHGNDIPSNYNIKEIIKNKCNLSKLTKNELYKNIKSKTGLNYTGVFQGVTECYIGDNCTLSVVSLESQTNSFLNIPILDTCLHGMLILINDQCQIVFDKAIGFKYYSSNIPADFKENKDSFYVYSNLRPRVGGDSYHGTIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFQSSLNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSFEEKDDTYFEFNKVIIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKIYKCSYLRKKNQVISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYHPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLTTNGQLVFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCGMPQQSWYQLLNSCNFKDIVMSKECIFFGSVIQAQKPPISLLNSQPKYDNIIIYGGSINSSFVENIKLDSNSKSLFQIETIQEFNKLISKSTITNDSIVYFIKTLETLSLDNFKQITLEYIEINQKLLQINSLCKHVLIVSDSRKTNYLASSAIGAARYFDEFPLLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKKIQIKPSKISHIEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGRDGFGLSTFEILKWKGFKSNLFVTVNSDKTKQYLLKKYGDLITGIYSNTDKSYVAEIKNKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLTKYGRIIDLNSNHLNQSEFLKNINFKYNHGYHNFELSLFQKNKILKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINDILNENQQIRNIDSIFHFAFQQIACKVQEINMKHLNISHGAKSMGAINLHNQSIKRNWKLINFVMASSALSFIDSTDQCTYACANTLLDSFSKYRVSLGLPSTCINLGLIESTGFVSKNESISVFLDGNGIIPTPINRVLGLLDLQIQNASKFTNSMISNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQNKYLPSNRIDYWKNEMKFEESIKPIPNEIRSRNNNSGKIILLTGTTGFLGGFLLFNMLRLDSCKLIYCLIRNKSKSSYPLDEIINNLKYHQLYEKLNKSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKNYNIPSILIRPPSIFLNPETGIGHSSDLTLLMIQSCYELGYCPNQILNGFILINTITWLSNNITNIIMNDNCWTNSKMNIYNVHGKQIQSSLIIKPLEKHFNCKQINNNDWIDMVNNSNKKSCIKLKSFHSLENIFKSENKGYKSNESQSISLSTKSLLESMGSYNTDLKITDKMIISHIKHIFK", "length": 2924 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G100-1", "protein_name": "Probable polyketide synthase 7", "gene_name": "pks7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNFKNINLIEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYLHTNKHQDSVLKNVIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAISQGYHSILNGTSDISIVGGVNLILDVETTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECAGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNEKLSVNEIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRKNEKPVSMMINNFGVTGSNCCLLISEFKKQDYEPYENNYKSNNKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLCQRSVIAASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLINSKLSKYYGYSVLEKLRSIGDDDTTSIHDPNISQPAVCMISVSLFELYCHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYHRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSVLKLNIQSNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIINPVRFTQTISNIYKHIESNQLNNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNKKIDLPLYQWSDETYFAQTQTLEQHREEGPPIDHLGISNSFISPFNNSYKTLIDINNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNQWTQSSNSNFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTHIKSKTGLNYTGVFKGVTECYIGDNCSLSVVSLESQTNSFLNIPILDTCLHGMLVLINDQCQIVFDKTIGFKYYSSNIPAYFKENKDCFYVYSHLKSKSADSYHGSIIVMLSDGSVLYEIQEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSQIPTPSYFKSIIYENDSFHSIVNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKFYKCNNFKKKNQIISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYLPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQVVEQMYQLLTPNGQLVFVEPPYKSILIDSIVGSFDQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDIVMSKECIFGSVIQAQKPPISLLNSQPKHDNIIIYGGGNNSRFFENIKLYSNSKSLIQIETIQEFNQFINKSTITNDSIIYFIKTLETLSLDNFAQITLEYIEINKKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSKISHIEASSIPIDYLASFISLFNVGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFKSNLFVTVNSDETKQYLLDRYGDFISGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKNARIIDLTSNHLNQSEFLKNINFKYNHSYHNFQLSLFQKNKIQKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSIDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYACANTLLDSFSKYRVSLGLPSACINFGSIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNSGKFTNSMLSNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENIGNKNIDELFIEKVSELFSTDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQCGREI", "length": 2513 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G101-1", "protein_name": "Probable polyketide synthase 8/35", "gene_name": "pks8", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLEIINLIDKGVAIVGVGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSDAHQIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYQHINKHQDSVLKNVIAQSAYAVSNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVGMIKAYSYLSMLSKTHGKCKAFDESGDGFTRGECATIVVLKNLQDAVKDGNRIYCVINGSSSNVDGGGHMDKVNLYSPSKQSQFNNINSAFKSTNGKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRINEKPVSMMINNFGVTGSNCCLLISEFKKQDYESYENNNNNKSNHKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLYQRSVVIASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNDEIFKKSIDLIDSKLSKYYGYSVWGKLTTIKDDDLTSIHDPIFAQPALCMLSVSLFEIYCHWGVNPSFILGHSLGEISAAYCSGMIDLDTFCYTVYYRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNDIVFIEIAPHPTISFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYSINFKCQLENKKSNQSINLPLYQWDDELYFAQTQTLEQYTKEGPPIDHLGLSNSYYSPFKNSYRTFIDINNKPFQYLKGHMVKGKYYFPGCGYIDIIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTQIKSKTGLNYTGVFQGATECYLGNDCSLSVLSLKSQTNSFLNIPILDTCLHGMLVLINDQSQIVFDKAIGFKYYSSNIPSDLKEYKDSIYVYSNLKPKNADSYHGSIIVMLSDGSVLYEIQEVIFKSLIPIKHSLKIEYPNDELYKVHLQSKDSQIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKNQRLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSKIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCSYLRKKYQMISHVIIHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYRSLTIDESLLENQAIKPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFIEPPYKSVLIDSIIGSFEQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDILMSKECIFVGSVIHAQKPPISLLNSQPKHDNIIIYGGGGNLSFVENIKLDSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNYKQITLEYIEINQRLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILVDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNNNNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSNISHNEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVDLDETKQYLLDRYGDFITGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKSGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFQLSLIQKNKIQKCLYEISHAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAVNLHNQSIKRNWKLINFVMASSALSLIGSTDQCTYACANLLLDSFSKYRESLGLPSACINLGSIESTGFVSKNESISEFTDGIGYVPTPINLVLGLLDLQIQNAGKFTNSMLSNLISSKFKNIQQTSLFLKFDYLMNLNDNSEQTKKENIGNKNIDELFIEKVSELFSTDQSRINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIKQLQNNTINISIKMILNSLMKNNQI", "length": 2514 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G110-1", "protein_name": "Acyl-coenzyme A oxidase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKNRIEIIKKHLEVNNSQTTNNKDEVLEKELFNSIDTNINVGELKLLIDSVEESKYKDETREFIRNHPKFKENFIGLDMATYRQLVLEQCAAIANRGLIHFTDIKNNLHRYIGALEMFALYNNNILTKLSVQYTLFGGPIIFLGTSRHEKYIEDANTLKTMGCFAMTEIGHGSNVRGIETTAHYDKQTKEFIIHSPTPTSEKFWIGCAYLHATYAVVFANLIIDGTNYGIHAFIVPLRCPKSGAIMKGITIKDCGHKLGLNGIDNGQIRFDQVRIPRENLLNKYSDVSEDGVYKSQFNTPIKNFAATMSPFIVGRMAITKGCSGAAKTSLSIAIEFSHIRKQFGPSSNKELPLITLSSQQRRLMAPLARTILFDLYIQRLTNELCQEKLPASIHAHCSGIKAVYSWFCVAALQTCREACGGQGYRSANRIAEFKNDCDIICTYEGDNTVLMQQLAKYLLGVKQKQTNTTTNRIYLDGEDAKSLFFNFSNINQLFETREEMRLAELKQIIDNSKESAYFAFNNAIPWAVKLGFAHMTKIVFQNSINTLKLKNVKPLTHLIMLDALVSIEEDLGWFVSNHLISPNVAQSIPFLIQDLCFEVTKVSKQIIASFDIPENCKPSSKDLISDLF", "length": 629 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G138-1", "protein_name": "Probable polyketide synthase 21", "gene_name": "pks21", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLENKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSIAMGFQSIQNGTSNLSIVGGVSLLLDPYISKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSKTSTPSKPLLIGSLKSNIGHSEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNNNEKPVSMVINNFGVTGSNCCLILSQFIEQSINQNGNGHSYPAESQQQQQQRFLIPFSANSVKSLKNYEDLIINDIKISTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTNNDKSSNITIKRNQPLVVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLNLKENNIFCAFLGSLSSFHTSSQHSTKNEILPLDIPSKQSRIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDVNFKCQFNHNDDDVSSIRNSKVNISLPNYQFDEQHYWKVDINFEQYRLNGPNVFNSLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNQDIIINNLEFLAPFVLKENVKHTLQTNVYQLGNTDYRVTFNIKDNKTNQWVQTCTGNFQLISLKDNNNDHSSKYDINQLLSECNFTTLSKQEVYKHSRSITGITHLGAFQGIEELYFGNDCIISKIQVNTENFDIDGKPVYQTYDKSFFNTALLDSCSQTIVGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLESDSYKSSVLVLLEDGTKLLEMDCISLHSTLPLLNSLLINNPTTELFTNNLQCKDSLVNILSIDNNQTFSSISSSNTVTEIIKQTIKPIINEKIVFRILQSFSDLELSKQIIETLNQIFDDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDGDDETIIKSIFNILSSNGLLLIIGDDIGDKYNIDSLINLGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKESKYTNEFMKLISNNHISCKQTIISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGTARYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNQIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISNENQNCEFKVGDNVFGIACDTTASHVIADVLYVSHKPENISHVEAASLPVIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIELMHINKKVVSRLLKSISNALNENKLKPIPITTFQIEDVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKSVDVGDPIEMRKSINQILLENPNIDNIDSIFHYAFAQITKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCSYVSANLVLDSLSRYRKSIGLPSTCTNWGAIKSAGFVSRNELVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKNSNLIVSKFNYDSIKKLSSETSTFQRLDFILNSIKEKDNDSNGGENSVSESIQTKILNKISELLSIEQSKINTDIRLSDYGADSLTSVQLKNFIDKDIKSNVITLQQLQNNTIDMNIQTILEQIKKLDSNETKGKSKNIIKKDSAPTLDYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKIKVIVGNLASPLLGLSKLDFDYISNQINLIINSGADINLASNYEESKVVNIGGFIELIKLSTTGDYQKPIVGFSSVSVFFNASNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLLREVAKRGIPSMLIRPPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPKIDKNILTSPIGWISLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSAMNPSFSFLEKQYGCEMVEYEQWKNIINQSKILSCVKLKTFHSLDDLYNIYNLGNGFGVSKKTKELLQSMNSYEGGMVNEKMIQNHINYIFKN", "length": 2779 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G149-1", "protein_name": "Transmembrane protein 184F", "gene_name": "tmem184F", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLSHINIIYIIWILLFFFTCLISFFLVNRHLVNYSSPNVQKNVVRIVMFLPLNSGLSILSSIFPGIAIFNSLVRNCYMAFTAHCFFSMMTNSIGEKNMLDLFESQGKMKFLCCKVMKLNRKLFNTLRFGSIQFFIVKIFCSIATITCISISEEVHSILNVQSFAPYEFLISLVASIFCTISLSIFLAISKEKLSQYWPMTKYRIMIFIFFIEQFEYLFFALIFLRGPFFLGFKNSFDQTIFILHFTVVVTMFLFSIVYLFIYSYKNYRNKASNEPLVGRNFKDSFGLLNYLDVLNPKDLFIDFASIFKTNNNKFKELVEENGDKKPKKNIEDQNQENSNDQPLSIQMA", "length": 348 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G188-1", "protein_name": "GATA zinc finger domain-containing protein 16", "gene_name": "gtaP", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSYQIQNQPYQQIQNTHPSFQQVQPMQVPHLQQQQQHQTMIAQQQHTPPQQHTPPQMNMIQQHTQPMLSQPQISLQMQPPSPILASQQQQQHMQSSPILASSNLTNSNNASQTTLPIITSKLLLKKEPIDQEVVNSTHKTTTTNNKPPKQSKRKEKERLEEEKQTVAQQQQYQPPFIPLASNESNSDNPFKGSHAYGVSTTPYGNSQFNNNNNNNNNNNNNNNNSNNNSNNNNGNNNINNNNNNSNNNNNNNSNNNNNNSNNNNGNNNNNNNNNNNNNNNNHNTNNNNSNSNNNNNNGYQQDKKDDYSMMIWSEVGRKINILIRTTSKATKGTPISTQEIAEAIGASNGVTADLVELIKSINDPTYVRKLPPSSISNTPTMGSQSGGMVYNSSPMLSPSTMSPILQHGNYQMGGDMYFGGNNQFSGDKQSALNNVKNSKGGNTNNSGGGSSSGGTNDTQAKKPARRRKMRYGGTELSCHTCGVTNTPEWRRGPNGAKTLCNACGLAWAKSVKSEKQKELLANSTGVNITEPKKAQKRKKESSDNNNNNNNSSDSNKVLKSDDGSNNTNLTNDDDNGYPSSPNSSNSTSPSSHNINNNNNNNNNNNNNNNNNNNNNNNNNNNNIGNNNNNNINNNNTTNSITTPTTTPFPTTIPAMQIVSQLPVMVPQTQQQPHMSGNIISFQALHQNSGYQHYK", "length": 695 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0R191-1", "protein_name": "C-X-C motif chemokine 11-6", "gene_name": "cxcl11.6", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MKTLAAFLLLSCLIAGEVNGQDRSSRARCFCVDKGLNMVLLKNLDKVEIFPPSPSCNKHEIVVTLKNGAGQKCLNPDSKFTKNVVLKAIGKRMQQSVPHSTTTGTVKSSMTSSTSAPTAFK", "length": 121 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "B1AV09-1", "protein_name": "Leucine zipper protein 4", "gene_name": "Luzp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANHEDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHYSRRSRNRFRRAPVHSERSHVYSGRTNNYTDRPHHDLSDRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIDHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESLDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AY40-1", "protein_name": "SSX member B8", "gene_name": "Ssxb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSFCEKVPMEVLYEPKNICKAFQDISTYFSDEEWGKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMSGKEQDKQSLVEGIEVHDSEDECFEGSFGVTPIKQMKLTPVTISIHNVEGSLASGENNSNLAETSGIQVNVWSHRLRERKYRVIYEEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AYI3-1", "protein_name": "Predicted gene 13272", "gene_name": "Gm13287", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLAELRSVPGHQCLRDRTDFPCPWKEGTNITPMTLGETTSCYSQTLRQVLHLFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AZM5-1", "protein_name": "Predicted gene 12886", "gene_name": "Gm12886", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLPCSLWLLSVCLLSWCCDAKLPVALDPESESVPKPPVLKTATEIAAIVVFMKTSNETPKSGTYGQSLQDGKNKIKDVEKEVLDACSQLCQSLAQDPNLHHGYILRAYFKEHQFLCCF", "length": 119 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1B0R2-1", "protein_name": "Spindlin family, member 2D", "gene_name": "Spin2d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSKLTKKRAGRKRQRSRSPALPKRNIVGCRISHKWKEGDEHITQWNGTVLDQVPVNPSLYLVKYDGIDSVHALELYKDKRVLSLKVISKRVVSSGVTDSSFADAIVGKEVNHLFEGEHGSKEEWRGMVLSQAPILDNSFYITYERDPILYTYQLLDDFKEGDLQIMEGFSDPPSLDIDLELVDGLIGKHVEYTNDDGSKRDGLIIYQIETKPRVYLVKYEDDVHIHVTHLEKEL", "length": 236 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B4F7F0-1", "protein_name": "Claudin", "gene_name": "Cldn6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASTGLQILGIVLTLLGWVNALVSCALPMWKVTAFIGNSIVVAQMVWEGLWMSCVVQSTGQMQCKVYDSLLALPQDLQAARALCVITLLIVLLGLLLYLAGAKCTTCVEDKNSKSRLVLISGVIFVISGVLTLIPICWTAHAIIQDFYNPLVADAQKRELGASLYLGWAASGLLLIGGGLLCCACSSGGTQGPSHYVARYSSPVPHSRGPSEYPSKNYV", "length": 219 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B7ZW38-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein C-like 3", "gene_name": "HNRNPCL3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASNVTNKMDPHSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIAGCSVHKGFAFVQYDKEKNARAAVAGEDGRMIASQVVDINLAAEPKVNRGNAGVKRSAAEMYGSSFDLDYNLQRDYYGGMYSFPARVPPPPPIALAVVPSKRQRISGNTSRRGKSGFNSKSGKRGSSKSGKLKGDDLQAIKQELTQIKQKVDSLLENLEKIEKEHCKQGVEVKNAKSEEEQTSSSSKKDKTHVKMESEGGADDSVEEGDLLCDDDNEDQGDNQLELIKDDEKGAEEGEDDRDRANGQDDS", "length": 293 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "B8JKF6-1", "protein_name": "BTB domain containing 35, family member 13", "gene_name": "Btbd35f13", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRFLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGAINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD1-1", "protein_name": "Spermatogenesis-associated protein 31F1B", "gene_name": "Spata31f1b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD2-1", "protein_name": "Spermatogenesis-associated protein 31F1C", "gene_name": "Spata31f1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD3-1", "protein_name": "Spermatogenesis-associated protein 31F1D", "gene_name": "Spata31f1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HLM6-1", "protein_name": "Small integral membrane protein 20", "gene_name": "Smim20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAARNLRTALIFGGFISMVGAAFYPIYFRPLLRLEEYQKEQAVNRAGIVQEDVQPPGLKVWSDPFGRK", "length": 69 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "C7G009-1", "protein_name": "Thioredoxin fold domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLILNGNWLVKFGAGWSGHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEYESICIKYNIIGYPSLVFFDEGEIKHYRGPRLFENFKEAIDKHLNKEFVAFSQNQPSKIIVITNENLDLLLTGNWLVKFGAAWSLHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEDNSICKKYNITGYPSLVFFNEGQIKHYTGPRQFENFKEAIDKHFKYGVKWSGHCKKFQPVLENLAQHYNSDIENSKIKVAQVHCEGDDSICKKYNITGYPSLVFFDEGETKPYRGLREFDKIKEATDKHFK", "length": 303 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G010-1", "protein_name": "Calcineurin-like phosphoesterase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLKIKFSIISLFILKLVISKPILKFNNNNQFKIIQFTDLHYGSEPVDDIDTIFSQVNILDYEKPDLVILSGDMVTGYEEQFEDDDRNYWKYWNVFTRPFVERNIPWAITFGNHDGEGALSTNEILKIDQTFNLSLSQSNPVEMHGIANYVLKISSSNSLKSEPASLVYIFDSSTKGCSKLDWGCVHQDQVDWFKNTSKSFNKTDSIAFVHIPPVEIIDLWNNYPVYGNYSETSCCFDNDYGDFVSSLVESGDVHGLYFGHDHENDFHGDYKGVDLGYGRKSGAGSYSSKKPLGARVFQLTESPFTLSTWIREEDGNIVSQVIHPPSEFDRKPLQCKMKDKYSKKELIAIKVIGGFLIFLGIVVVGLIGFFGFKHYKKFKKQTLEMQNLV", "length": 390 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G064-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKDEKQFQQFPNKGRTVQANTDLPKGSTVFRCAPFASSIEDSDKLATEKYCGFCLQRIPKSDSKECLCKNCKLYSVCKSCRSINESAVEPFQIIIKSTFHLGSDTRDMRLLLRIIANIANGKQGMQTPIDDYQDFMGLTSTLDKVDKEHMTKFKRGVTSISSLISSVRGVGYLKNTITIHEILECFSSVLTNAHQFSYATSKEIGRGVCPTGYFNHSCMPNTTWSLDDQGMLLFSTSSNVKKGDELSLGYLANEYPLKNRRRELLDGYYFFCQCPLCEFQSNLSGYLCEKCKEPLLNDSIVYHEPSLTNPLDTGIGLIKHLRKMIDFRQQSVEFKKMFSSEQLSNILQKGVPKHIQSVFNCDASDNEELQQIVEISERSIKSLPLINGEPIDFYPLSDRNYYEYFKQLKNSKISSPEELQRIKDKILSLINPTIYNSFKDKIDKRLLI", "length": 449 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C9JPN9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 12", "gene_name": "USP17L12", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLKLSSTTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "D3YTW8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r258", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSIHQFVILVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAESRATQTILIVVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNL", "length": 314 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTX5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r259", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY1-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r107", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLDFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r138", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YXI8-1", "protein_name": "Predicted gene 10377", "gene_name": "Gm10376", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQAGSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQNNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKILCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAVMSNPCA", "length": 184 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYI9-1", "protein_name": "Predicted gene 7347", "gene_name": "Gm7347", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYY1-1", "protein_name": "Secretoglobin, family 2B, member 7", "gene_name": "Scgb2b7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACFPFFEAYASVLSGSRVWLYQELQAFDATAEEKVALEKIQDCYSEESIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z236-1", "protein_name": "Predicted gene 3676", "gene_name": "Gm3676", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQTVSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQHNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKTLCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAAMSNPCA", "length": 184 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z8D1-1", "protein_name": "SIGLEC family like 1", "gene_name": "Siglecl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLWGLRSLLLLHLGFLSPVLVDTKKTAVEDGLCSTVPCVIEFSKAPLRKPMIVSYRLNENISFHAGTSQPRGPVADLSTEEVEYCILLTHNMLGRKNMTYSLYVGLGAQKDLTQKQELHIPGSSMAGEPVSLTCTIHSTCQESKALFLSWKGPIMSSSTTVPINPSSALAIDPKPEDQDTTLRCHLKLSLDNLSSSKVVKLQLVSPARLLNYSCLLKRTLTCSCSFHGIPTPSVQWWVGRTPVSVNSIDAILHMTSTTLESWTNSTIHLMWEPEIIKSLRCEGKNQYGVHASGIFLIPDKSSVSSVFLRGLIQGIVYGAIASALFFFFLVVLGMKILNWWEENQTCKNEEAPTLKKPVWGGAKPAEVGS", "length": 369 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z8T0-1", "protein_name": "High mobility group nucleosomal binding domain 2, pseudo 3", "gene_name": "AABR07053402.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAERDAQGDEAKAKDEPQRRSARLSAKPAPSKPKKAPAKKREKIPKRKERKADAGKDANNPAENRDAKTGQAQKAEGAGVAK", "length": 86 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z9U8-1", "protein_name": "S100 calcium binding protein A7 like 2", "gene_name": "S100a7l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSSEQEVMKLFDLFQNYHVRRTDKLDVQETKRVLREFFPNFMKALNASGIKILNDLEKEITLDEIWDMIGRMAMAYNKKNSNALKD", "length": 91 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZAM9-1", "protein_name": "Olfactory receptor", "gene_name": "Or4f60b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKKVNYSVTSEFVFLGFTNSWDIQLLLFLVSSMFYVACIMGNCLIIFTVASDTHLHSPMYFLLANLSFIDVGISSATSPKMISDLLKKHKVISFRGCVIQIFFNQAIGGAEMVLLIAMAFDRYVAICKPLHYLTMMSPQMCLFFLITAWVVGLMHSVIQLIFIVNLPLCGPNILDSFFCDLPQFIKLACMNTYRLELLVSISSGFMSLVSFFLLSISYIVIILTVLKHSSSGAYKALSTLSAHVTVVVLFFGPAIFFYIWPSSTHLDKFLVLFDAVVTPFLNPVIYTLRNKEMKRAMRRVFRHLMGYRQIS", "length": 311 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZC26-1", "protein_name": "Ferritin", "gene_name": "Fthl17fl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEDAINNHIRLLLQASYSYLSMAFYFDRDDVALGNFKRFFLSKSHNCKASAEMFVFMQNKRGGHVFLPSIAKPDRESWHGGLRAMECAFRMEMTINQSLLNMHELAKGKDDAHLCDFLGQHCLDQQVHVLKKMGGYLTNLRQMGAPEQGLAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCM9-1", "protein_name": "Dynein axonemal assembly factor 3", "gene_name": "Dnaaf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTTPAGSGNGFGTVSWWGLSPALDLQAESPPVDPDSQSKTEHKIPELDALLLGSVDGRHMLRTLARAMLWPLRRFNFYVLENNLEAVARHMLIFSLALEEPEKMGLQERSETFLELWGNALLRPSVAAFLRAQASHLSNLVPEPDRLEELLPWLSLRPLKFRERDALEAVFRFWSGGEKGPEVFPMSRLWDSRLRHYLGSRYDARRGVADWDLRMKLHDRGAQVIHFHEFRRWRDTGVAFELRDLSAYHVPNRTMASGRLLSHRGERVAARGYWGDIATGPFVAFGIEADDKSLLRTSNGQPVKTASEITQHNVTELFRDVAAWRGPRAIKGNVEETKSPEPDAPAQEPFTIHFLPLDSSQTLHHKTCYRGRFQLLYVSCGMIHLLSPELGACVAPGGNLVVELARYLVDLRPKELKAFSDRVVEIAQAAGFAPHTGTKPSETFARFYKLGDSTRGGGDSAVESGPVPSKVLAPTPESINPPQADQAPSLEVMSPPKVDQTPPLEAMSPPEADQAPPLEAMSPPRADQIPPLEAMSPLQAEVVLPLEAISPPQADLAPPPEVISPVQEALAMSSAIAPLKHVT", "length": 583 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCW3-1", "protein_name": "SPATA31 subfamily E, member 1", "gene_name": "Spata31e1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METFLLLMNSISDFWMSSSSMSTVMDMIFAILCGVGFFFLLIPFLKEYPGSPPPGSKKNISEVVKRRQSKDRKKSVTVDGCRDSQKNSLDIQHDLQTMESPIQHLLLDSSPHPFWNSKEKLNQLSLPQLFSYLKVLEALIQQKFNQLLLGLSSVLSESVVATAWVSREPSSGERKTVRFSDSLGFDQALPLAKGPPQRCLDQPLPHQLVTPSLVGMTEIQEQENLPNSISYQTPSIFQSRARGTAYPTTATGIQVPLPTTNEPCHPGLNWKDIPSCKVQNCQGASSQPTESLARCTLPTKNTRSASIPPEHYLMVHHHEQPQHEEKAINLGEQQRTHARFLPSKEPAQLQGDSPPNSNGYGKNWPELNQPAQPSTLNSKTYKWNQMMGPVPTGMLLKKVIAKYGIPNTIKKDLKLRVKDLLCTSSSTPGESLETKNLTLRTDEHSMNTTENLSFLDPKTTMMKSNIMQLPMKHRQLPCDSKAEPYTKAAFILENLHHQDPGGIRVETASSARLRSPLFEQSPPEVQKTQSSPPPIDSHGHSRSHPDQWQRYQSVQPHALCSQAQPQQSRSIQGTGRSILQPNISVWMSKHERWMRSEDVASGHTSWSSRTVGYRDRVSPSVAKQTNILKIKEESPHVWRANLGSGEITNEQALNNSNEDFEPIEAKRSQGHLQMPTQQNTGYLHLKTEEYSNNDLKVNKQPQAWSVSHHADGSNTVHHAMVKLPSQHSLPSLQNGWQDPKTSQGLGDLLMNRDQSVETQFRVHKDKTEATNDSVFHPSEKRPSNLKYGGISQGERLGRVKSSISSFTQLKDSAKTESKSSPNIGGKREAPSKSSLKFIWNGAQYENLSTKLKGQRDSLKKDIPPPVTEQTQEVVHRINVIYSTAVELQSLMDSLVHKLVKTVGEPSELTRKHMTKVQEYKMESLPFQLGSSSQPSKGLHDPNKSRSVRRMSDDHTSPKEPNNHTFTYRGNRDKMQAGVDVQRVCYQHLDKVKIGFGQHSTPMRNGNPCFHKKAGDKQESSLADQSTGDADQTKPKNEIVGSPHRIPERHNQSSRYREIRDNQEPSVDHKAIDPHQNTKKGMGYSQLMSPKENHPVKISGTAAQGASDPEEIRTKSGKECSPHRSPKMHDHSLRHREVRDKPQPGINTQRAYDQHLNSPKKRMTSENLLTPKGTNHPCWHRVTGDKQQSSLSDQRACDPEQMRRSGMSSYPQRSPKVYHLSCSSEKIGEKLLPLVNDQRTHDKHPNSVKTRGCDNLPTPKGSNHPQGYRVIEDKQQLGLAYRRTCDPGQIKKSGMGKGPCKDTEECNLLYRYKIIGNKQQPGIVHRACDRHQSSKEGMGQGQPMNPKVCHSAKHRRTGGQDQSGVAAQGASNPR", "length": 1373 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDD6-1", "protein_name": "Synaptonemal complex central element protein 3", "gene_name": "Syce3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADSDPGERSYDNMLKMLSDLNKDLERLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCKEEMEKNWQELLTETKRKQ", "length": 88 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDJ1-1", "protein_name": "Olfactory receptor", "gene_name": "Or13c3f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDDMDKNNQTFVSEFLLLGLSGYPKTEILYFVIVLVMYLVILTGNGVLIIASIFDSHLHTPMYFFLGNLSFLDICYTTSSVPSTLVSLISKKRNISFSGCTVQMFVGFAMGSTECLLLGMMAFDRYVAICNPLRYSVIMSKEVYVSMASASWFSGGINSVVQTSLAMRLPFCGNNVINHFTCEVLAVLKLACADISLNIVTMVISNMAFLVLPLLLIFFSYVFILYTILRMNSASGRRKAFSTCSAHLTVVVIFYGTIFSMYAKPKSQDLTGKDKFQTSDKIISLFYGVVTPMLNPIIYSLRNKDVKAAVKYILKQKYIP", "length": 320 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDT4-1", "protein_name": "Transmembrane protein 92-like", "gene_name": "LOC100364194", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQEAWVLDALTVIFGLLFSLQGVSSNKTIYKCEDIHCPKGFRCCDNECCLERKIWNTDNEPFRILFIILLVMLPLLCICGLVRRFCPKCRELQHEVRTADHQSPPDPPSIAPLESIWVTSLDPPPPYSQVVQKSTPTEPPPPYSLRPEDSTCPMRETSHETL", "length": 162 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFJ9-1", "protein_name": "Family with sequence similarity 24 member B", "gene_name": "Fam24b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSSFDLRTIIMIVIGSGILAAMFLLTGVVLCLYSKIARALNPSGTGKELDDQLCSDPCKTTQDQIIRVNSLNADTCRPFHGSTIGLENCQPLQCFSACGTYEGANSLTPCLCNTKEGL", "length": 119 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFW5-1", "protein_name": "Transmembrane protein 107", "gene_name": "Tmem107", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRISGLVPSRFLTLLAHLVIVITLFWSRESNIQACLPLKFTPEEYEKQDNQLVAALCLTLGLFAVELAGFLSGVSMFNSTQSLLSIAAHCSASVALSFFIFERWECTTYWYIFAFCSAFPAVTETALFIAVFGLKKKPF", "length": 140 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZG05-1", "protein_name": "40S ribosomal protein S12", "gene_name": "LOC120100003", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEEGIAAGGVMDINTALQEVPKTALIHDGLARGICEAAKALDKRQGHLCVLASNYDEPMYVKLVAALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFEYKK", "length": 132 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGM7-1", "protein_name": "Peptidase inhibitor 16", "gene_name": "Pi16", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNCRVSWMPQHSSAAVSGICPPQEGPWSSYSLWPEPPLLREKEAVAKDSRGVDSTLVQTQGTQPSWRHCVSWAGPPDTAPAAPPQPGWCLCGKDFKSSRQTPDRERQRGLATMHSSCSPWVMLPQLPLLLLLLLLLLTATGPATALTEDEKQTMVELHNHYRAQVSPPASDMLQMRWDDELAAFAKAYAQKCVWGHNKERGRRGENLFAITDEGMDVPLAVGNWHEEHEYYNLSTATCDPGQMCGHYTQVVWSKTERIGCGSHFCETLQGVEEANIHLLVCNYEPPGNVKGRKPYQEGTPCSQCPLGYSCVNSLCEPERKPEKAQDSPPRVTEVPGSRETGIPSLATSESLHFSSVTKVSDSLATEPSPAVETKAPPSLATEGPSSMATEAQSFLTEVPSVSATHIQPSLDEGPVNFLTSTHIPVPKSTDKEASSKSRAASVSPEKSLYPKMSPTETGESPPQIQEEAEPKAELPEREDELPEAEVELPEAEAELPEAKAELPVSSEALVPVLPAQERGGPKASLEHSSYPVPTYLPNFPSASGNATGGRTLALQSSRTGAEDPEKASWDSKNSAPVWGPFPGLLLPLLLLAGIF", "length": 596 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGX2-1", "protein_name": "C-type lectin domain family 2, member M", "gene_name": "Clec2m", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTESSLRLSQSSHHRLTFDLKKVVTLWILVIGVIAVLLWGFFSFPKKFTVTRQTKNEVCSDGVKICLHGWNKLNRNCFTHFSHANSWFTAKETCKFHDATLAVFNDQTELDIVMKQMEDIQTFWIGLYKKDFRGPWVWTNGSKYNNWYEVQDYGHCAFLHKSGIDSTNCNDLKEYICTQEGHCP", "length": 185 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZIZ8-1", "protein_name": "Ferritin", "gene_name": "RGD1560203", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEEAVNTHIRLLLQASYSYLSMAFYFDRDDVALENFKRFFLSKSHDCKASVEMFVFMQNKRGGHVFLPSIAKPDRKSWQGGFRAMECAFRMEMTINQSLLNLHELAKGKGDAHLCNFLGQHCLDQQVHVLKKIGGYLTNLRQMGAPEQALAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKK4-1", "protein_name": "Zinc finger protein 869", "gene_name": "Zfp869", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDTPIVGLSSPDQGLVSFEDLVVHFTQDEWDLLEASQKSLYGDVMLETFRNLTAVGYEWEDEAIEDHCEEPEVNLRDIVSHSEYTHEYEHKEYEEKPPDANFLTSVEGCVETKTSSGPSVCEVCLKTFGLYHLTYNGHHNYDYKELRGSQTEENDCEGNSCDKTSGSLQKEDKIHTGKKLYVCQECGKAFRYPSALQLHERIHTGEKPYECKDCGKAFRGLSALHLHERIHTGEKPYECKQCGRAFTYLSALQLHERIHTEERPCECKQCGKTFRYSRALKLHERIHTGEKPYECKQCGKFFRSHRTLKLHKRIHTGEKPYECKECGKAFRWLTSLKLHEKIHTGEKPYECQECGKAFRCQASYHRHKITHGGETLYECKECGKSFIYPSLLQVHERTHTGEKPFECKLCGKAFRCQSSLRLHERTHTGEKPYECKHCGKAFSSYNYLRFHERSHTGEKPYECKECGKTFTHRSYLRSHERRHTGEKPYQCIQCGRSFSRHSSFKRHQSVHGESPYEQYLIPLSPFSSKE", "length": 530 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKM3-1", "protein_name": "Protein GPR15LG", "gene_name": "Gpr15lg", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRLLTLSGLFFMLFLCLCVLSSEGRKRPAKFPKLRPCCHLSPRSKPITWKGNHTRPCRPCRKLESNSWVVPGALPQI", "length": 77 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZL22-1", "protein_name": "Olfactory receptor", "gene_name": "Or1x2b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSKWGENETGVIEFLLLGITNDPQQQRILFWAFLCMYLVTVAGNTLIFLAISSDPHLHTPMYFFLANLSFDDVCFTTNIIPRLLAGHVSGTETISYAYCLTQMYFLISFGNVDTFLLAAMALDRFVAICYPLQYHTIITPRLCVGLASVVWISSGLIALVHTLLMSRLTFCSSIPEISHFYCDAYLLMKLACSDTRINQLVFLGAVVFFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDSFSTQDTVATIMFTVVTPMLNPFIYSLRNKDMKETVTRLLHRGSKSS", "length": 313 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZLG9-1", "protein_name": "N-terminal Ras-GEF domain-containing protein", "gene_name": "AABR07047293.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSCCVWTTEGSGLKKDKNEGQGGTWKFMLLSCLQCLWPFAQKEIDLTRDNQAQDHEDQGEHEYAPQVVTEPCRESRISADMVENLVNRLVSSLQGGDPFFIPAFLYGYRQFTTTQHVLDRLLKRFAYFYLGCEEDEQIKSSLCCFLDTWIDQYPEEFSQTILKKLKTYLTVNMPSSDLNLRVHMLLKELRQESNESEGKDDDSVSLPVTLLYKTASAADLSSSVEVGSHTSGDLDIEVWFPSQKVQPEPAYPHETETPQSTIKVISWD", "length": 269 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZMT2-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3", "gene_name": "Ndufa3-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGRSSDFFKNAQAKEPVLVVSFSVWGLAVILPMISPYIKYAGVISKATPYNCPVPVRDNGNVPGVPSQPQERLSPSLERLKNL", "length": 84 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNA3-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "AABR07049918.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQETKNVVNPLFEKRSKNFGIGQDIQPKRDLTRFVKWPHYIRLQWQRAILYKQVKVPPAINQFLQALVRQTVTQLLKLAHKYRPETKQEKKQRLLAHAEKKAAGKGDVPTERPPVLRAGVNTVTTLVENKKAQLVVTAHDVDPIELVVFLPALCRKMGVPYCIIRGKARLGRLVHRKTCTTVAFTQVNSKDKGALAKLVEAIRTNYDDRYDEIRCHWGGNVLGPKSVARIAKLEKVKAKEFATKLG", "length": 266 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNR1-1", "protein_name": "Elongin-B", "gene_name": "Elobl9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVFLMIRRKKTTIFIEAQELTTVLELKRIVQGILKRPPEEQLLFKDDQLLDESKTLRDCGFTSRVAKAQDPATVGLVFREDASEGLQIHPYSTPLLPSVMKTGTDSLE", "length": 109 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNU6-1", "protein_name": "Olfactory receptor", "gene_name": "Or5p66b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSWLENGNHTTVAEFLLLGLTDDPVLRVILFTIILCIYLVTVSGNLSTILLIRVSSQLHHPMYFFLSHLASVDIGYSSSVTPNMLVNFLVERNIISYLGCGIQLSLVAFFGAAECFLLAAMAYDRFMAICNPLLYSTKMSTQVCILLVVASYIGGFLNASFAMVSFCSFLFCGPNIINHFFCDFAPLIELSCSDVSVYVIATSFSAGSVTMITALVIAISYSYILITILKMHSTEGRQKAFSTCTSHLTAVTLFYGTVTFIYVMPKSSFSIDQNKIVSVFYLLVIPMLNPLIYSLRNNEIKSALKKQIWRKTVS", "length": 314 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZPU6-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC134485591", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRSTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAEGIIVNKQVKGKILTKRINVRIEHIKHSKSRDSFLKRVKENDQKEKEAKEKGTWVPLKRQPAPPREAHFVRTNGKEPERLEPSPYGFMA", "length": 160 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQ96-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC102550668", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKVKRRGTRYVFSRPFRKHGVVPLVTYMRLYKKGDIVDIKGMGAAQKGMTHKCYHGKTVRVYNVTQHAVGIIVNKQVKGKILAKRINVWIEHIKHSKSRDSFLKQVKENDQKKEEAKEKGTWVQLSLQPAPPREAHFVRTNGKEPELLEPVP", "length": 155 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQD9-1", "protein_name": "Developmental pluripotency-associated protein 3-like", "gene_name": "LOC120096627", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDKSSEKVDPVVNPETQMNDGSQREDEEDSPDDSEILQPETLVKVMKKLTLNPSAKPPKYHRHQRVRLRIKSQPVGNRSERIMREVQSAFPKTRVRTLLSVLKDPIARMRRFVRIEQRQRQLEGNERRDEPFRCLCTFCHYQRWDPSENAKIGQNQKN", "length": 158 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQT0-1", "protein_name": "Glyceraldehyde-3-phosphate dehydrogenase", "gene_name": "AABR07071101.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MILCIKPSSTTKYCLNQCYLISCINKPNLLDGVNGIPLDIVAINDPFIDLNYVVYMFQYDSTHGKFNGTVKAENGKLVINGKPTTIFQERDLANIKWGDADAKYVMESTGIFTTMEKAGAHLKGGTKMVIISAPLADAPILKYDNSLKIVSNASYTTNCLAPLTKVIHDNFGIVEGLMTTVHTITATQKIVDGPSGKLWRGGHGAAQNINPETTGVAKAVGKVIPELNGKLTGIAFHVLTPNVSVVDLTCHLKKPAKYDDIKKVVKQASKGPLKGILGYTEDQVVSCDFNSNSHSSTFDARTGIALNDNFVKLISWCDNEYGYSNRVVDLMAYMASKE", "length": 338 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZTK7-1", "protein_name": "Uncharacterized protein", "gene_name": "AABR07012426.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSGDLEAKISGYTHISVQRFCYKWTISNFSFCMDGIRENITSPVFSLEGNEEVQWCLRIFPNGVDEESKDYLSVSLGLHSCPKSPVLAKVQFWIINAQGEKHQIKEIPNILSFSPKHQWGLRKFILREFLLSRRHGLLPEDQLILCCKVSVVGPSFSTPGHNMTPANKDPRQMLADDVGELWENSLFTDCSLVVAGQEFRAHKAILAARSPVFRAMFEHEMLESLTNRIEIHDIHLQVFKEMMAFIYTGKAPHLHSHSMATELLAAADMYDLQDLKVMCEDSLCRNLSVKTAVPTLMADLHSTELLKTRVMDFIILHASEVSETLEWKSMVESHPHLVEEAFGSLASMHYFFLEPSLKR", "length": 359 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZV50-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLVARSWVCHKTYVTPRRPFEKSRLDQELKLIGEYGLRNKHEVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIVVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLRLAKSIHHAHVLIRQRHIRVRKQVVNIPSFIVCLDSHKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEKKEK", "length": 195 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZWL0-1", "protein_name": "Ribosomal protein L32 like 1", "gene_name": "Rpl32l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALQPLVKLKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILKPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNLNARLRSAENE", "length": 135 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A176-1", "protein_name": "Golgi associated RAB2 interactor 5A", "gene_name": "Garin5a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPRLRTSARSPAPAVRMAISPSGPLGFTSPVTQPRREASPGVPTTQGRGVAMKGGRDLKPASGRADRPLAQAYAPCRPGRLQRHLLSGEFDQLRDFPIFESNFVQVTRFGEVANKVTMGVAASSPALELPDLLLLAGPDKENGHLQLLGLFPLQFVQLFVHDVSRQQLKVKFRTGRAFYLQLRAPPETRDCEFGRWVRLLYRLRFHSPTCAVPFTHEDTVPEESEDEDEVEEGQLQPPEVRAGPRAQGCWARKDGKGPVSCHRGQTRPAGLRTLGALIQPRSFQITKGPEIKPAQLRAREMDF", "length": 303 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A9N2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a77d", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQNNSVSEFILLGLTEDPAGQKTLFVVFLLIYIGTMVGNLLIVWTVIASPSLDSPMYFFLAYLSLIDALYSSTILPKLLIDLLCDKKTISLTACLVQLFVEHLFGGVEIFLLVFMAYDRYVAICKPLYYLTIMNQRVCVCLVVVSWIGAFAHALVQVFSVYKLPFCGPNIIDHFACDMYPLLGLACTDTYFLGLTVVGNNGAISVVVFMLLLLSYGIILNSLKTHSQEGRRKALSTCSSHIMVIVLFFVPCIFMYVRPVSNFPLDKFITVFYTVFTPMLNPLIYTLRNLEIKKSMEKLCRKIFTSDRIRISSCYS", "length": 316 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAM5-1", "protein_name": "Preferentially expressed antigen in melanoma-like", "gene_name": "Pramel", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVKTPNKLLELAIHSLLNEESAAIQALEEIPRELFVPLFIAAFEGGHKNVLSAMVKVWPYYCLHIGSLSIQEPQHELLKAMIENLPVYPAPSSSSRGPKLRILDLRQDTDCRITCPEVSTKTPSCFYSCAYSDRSITKIERQLCCVNAECKTLLPRPVELLVDLSLDGSLMEKEFLVLLMYKIEESLGSLHVCCRDLQIDKLCKCKCTLKFLDLKCIDQLSVDRGSLSDITSILCRMIHLESLSLSNVTFRSLSGKVFKIFLSHLQRMEHLKELSLSSFCLKNHLDRVLRILPPGLDFLYLPFCDLSYRDFKFMSQSPQVTHLKLLNLSNNPMYWGDFEPFHTVLINLSGTLQHLEINHCLISDSAMSALIPALIRCTRLRVLGFASNPISMPMLVNIMHNLTPMKELKYVIYPIPVHCYERWHFQGSLDRQKLAIVQLQLKAMLELAHREDMNWITYCE", "length": 461 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAN9-1", "protein_name": "Similar to human chromosome 6 open reading frame 52", "gene_name": "C17h6orf52", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVETQSPGKECAVLPLWVLTVTSCPLPSAIREQLRVHHSLRCHRDNHYELLHSFYWLSCYSRGSTLSGNGLGPLCVTENPELLAGPWAIPEETTDPAENQEEDFLRDPNLHLNIEESDKEFMAVREELYDSLMNRRWHCLDTVLSNVPDELPQCEVF", "length": 157 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ABB6-1", "protein_name": "Olfactory receptor", "gene_name": "Or13a27c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "VNCIWHSKMVSPNQTVVTEFVLQGFSEHPSLRLFLTGCFMSLYTIALMGNIVIIALVTSSTGLHSPMYFFLCNLATMDIICTSSVLPKALVGLLSEENTISFKGCMTQLFFLVWSGSSELLLLTVMAYDRYVAICAPLHYSSRMSPQLCGALAMGVWSICAANASMHTGLMARLSFCGPKVITHFFCEIPPLLLLSCSPTYVNSIMTLIADAIYGGINFVLTLLSYGCIIASILRMRSAEGKRKAFSTCSSHLIVVAMYYSSVFFAYISPGSSYNPERSKFTSVLYSVLSPTLNPLIYTLRNKDVKLALGRILASFSH", "length": 318 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ADX2-1", "protein_name": "Olfactory receptor family 4 subfamily A member 80", "gene_name": "Or4a80", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQSKIVTEFVLLGFTQDPAGQKALFVMFSLMYIATMVGNLLIVGTVIVSPSLGSPMYFFLASLSLMDAVYSTAISPKLIVDLLREKKTISFRACISQLFIEHLFGGVDIVILVAMAYDCYVAICKPLHYLIIMNRRVCILFLVMAWAGGFAHALFQVLAVYNLPFCGPNIIDHFGCDIYPLLLLACTDTYLIGLTIIANGGAMCIVIFILLLLSYAIILRSLQNHSQEGRHKALSTCSSHITVFFLFFVPCILMYVRPVSSFPIDKSITVIYTVVTPVLNPLIYTLRNSEMKNSMEKLLQKILSPNRLRLLCCLYY", "length": 317 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AEJ6-1", "protein_name": "Peroxisomal biogenesis factor 11 gamma", "gene_name": "Pex11g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLNGLASALESYRGRDRLVRGSVGPWRDRSDLEFGQDSEMRKTGQRGGPKGTDIGRLVSYMRTSYLSLPNCWPYKCVLALQIRTLGYGCQLIGGVLVEQCPSRSEVGRRLLVVSAQLSHCRTVLRLFDDLAMFVYTKQYGLGAEEEDVFIRWLSVLSNMADQLYYPCEHVAWAADAKVLQVDSARWWTLSTAFWSLSLLLGAVKSLWTMLKLRQKLRSPTGHFASQLPRSKWRAVEARIWSEALTLLSNLADLANAVHWLPPGVLWAGCFPPWLVGLMGTISSILSVYQAARAGKQAEVDSP", "length": 304 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D6R901-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 21", "gene_name": "USP17L21", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "E0CXP6-1", "protein_name": "UMAP1-MVP12 associated (UMA) domain containing 1", "gene_name": "Umad1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFHFFRKPAESKKPSGPEPEADGFVLLGATANEVRCKTSEAEGSQALETGKEDTSSVTVSGPETENQTGQTLQNNSLTAELLSDVPFTLAPHVLAAQGTISDLPDHVLSYDVGDNLSRFWYDFTLENSVLCDL", "length": 133 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E0CZF1-1", "protein_name": "PRAME like 34", "gene_name": "Pramel34", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGQTPPTHTLLTHEALIMSSLEELPTVVFPALFKEAFAGRHTNLLKAMVAAWPFPCLPVGPLMKKPNLETLQALLDGIDMRLTREFHPRRAKLQVLDMRNMYHAFWNIRADANDSDCKSKTLDEKQLVKVLPRYARRQRLKVIVNLSISSHFNKSKAYFLNWAKQRIGSLYFCCIKMRIWDPPDQVIRDIFNVFDPEHITELELNTDWTLLQLAHFASYFGHMKNLQKVFLAPLHKNTSPIINITNATEAKCVHKIISQFSQFNCLQHIFMKHVHFLRDYMNQVLGCLMTPLETLSITQCLISQRDFDLFSCSQNLFKLKHLEIRGMILYALDLMPLRVLLEKVADTLEILDFQWCRMKDSQINALLPALSQCTQLNQINFYNNDFSMCTLKALFQHTANWSKMNVEQYPAPLQCYSELGHVSVERFVQLCQELMYTLRAIRQPKSISFATDNCQKCGKPCVYDQGPILCSCFQ", "length": 475 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E1B8K9-1", "protein_name": "40S ribosomal protein S6", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKLNISFPATGCQKVIEVDDERKLRTFYEKRMATEVAADTLGEEWKGHVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKCKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPHRLGPKRASRIRKLFNLSKEDDVRQYVVRNSLNKDGKKPRTKAPKIQRLMTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK", "length": 249 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BBD9-1", "protein_name": "RNA polymerase II subunit A C-terminal domain phosphatase SSU72", "gene_name": "LOC112445820", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPFLPLRLAVVCSSNQNRSMEAHNILSKRGFSILSFGTGTNMKLPGPARDRPNVYDFRAMYDDVYKDLLRKDKERYMQNGVLRMLERNMEKEMPRPERFQECKDLFDLILTCEERVYDQVVEDMNSGEQETCQPVHVINVNILDTNKEATLGAFLICDLCQCVQLMGDMEDRIGELLQAFEEKSGRSFLHTVCFY", "length": 195 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BLY1-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIIRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLSSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E7F638-1", "protein_name": "Moesin b", "gene_name": "msnb", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSINVRVTTMDAELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYQDSKGFSTWLKLNKRVTAQDVRKENPLLIKFRAKFYPEDVAEELIQEATQRLFFLQVKEAILNDDIYCPPETAVLLASYAVQMKHSDYNSEHHIPGYLCRDKLLPQRVLEQHKLTKEQWEQRIQVWHEQHKSMSREDAMIEYLKISQDLEMYGVNYFSIKNKKGSELWLGVDALGLNIYERSDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKSPDFVFYAPRLRINKRILALCMGNHDLYMRRRKPDTIEVQQMKAQAREEKNKRQQERALLENEKKRRENAEKETEKIARETMELMERLRQIEEQTKKAQEELEEQTKRALELERERKFAQEEAEKLEKDRRIAEDVKTALLQQSENQTKNKDNLATELAELTSKINLLEDAKKKKEDEARKWQRRAIMVEVDLEKTKEELKSKLIGVHIQATSQTENDHDENDESSAEASAELTSTGSFRDRSEEQRITETEKNEPLQKRLQALSSELADARDDSKKTANDLIHAENVRLGRDKYKTLRQIRQGNTKQRIDEFESM", "length": 577 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FA22-1", "protein_name": "Protein tyrosine phosphatase type IVA 3", "gene_name": "ptp4a3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAWLNGLYPVEVCYNSMRFVITHNPTNQTLDTFIEDLKRYDAKTVVRVCESTYDKTPLEKHGITVMDWPFDDGAPPPTKIVDDWISLLKKSFSEDPGCCVAVHCVAGLGRAPVLVAVALIEGGMKYEEAIHLIRLKRHGAFNSKQLTYLEKYRSKKRLRFKDPFKHRSKCWLM", "length": 173 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FE27-1", "protein_name": "Beta-1,4-N-acetylgalactosaminyltransferase", "gene_name": "b4galnt4b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMRFPLKKIRKQFKLLLLLVLLMFAIGFTYLHINQGKAIKLHFNYGKDMERQAEGIGSSPKKHLSSSINPFEHGDAADSQEDGWGGEELNESAQESRANAEMHTLLAQKFLGLPWKPEYKGQANLHVFEDWCGSSVSQLRKNLHFPLYPHTRTTVKKIAVAPKWKNYGLRVFGFIHPYKDGDFQFAIASDDNSELWLSSDESPLNARLLVYVGQHGSEWTAPGEFSKFRSQTSKPVRLMSSRRYYFEVLHKQDDRGSDHVEVGWRPFLPGQKFDVIDSAYISLYTDESSLKMNSVHHIPQTLASHSLALQIYHRTETHTADMLKPDPRDTFYKIPMIDQSRLENVLPSCVYSPTYVVKDFPIARYQGLQFVYLSYVYPNDFTRLTHMEKTNKCFYRESPVYLEKFGFYKYMKMDEEEDDQPVFFPKPDDFLEEEEGVDPEEAINSSNRPVKRSGPSYQTSRITAATASSKPDRLDGGSKSSVFQQEKQYVQFKEQERSKKRTKGERFYRHSQVVDDEMTEIRQVKGSTGVLESQSGSLNEQTGPSEENGDSQTLSLVQRGRSLAWVLPDPALQSESKLIETASPTVKERSPFKLPHLYVLANRILGNAGKPVVEKESNSNKIYITRPRPPVSRPKPPVEVFPGVFLYQSRKSKRLVDLSSKWRSLKTQAAASAPWANFPLMDHKTSTQSALLKQSHLSSPTEPGPHNKGDPTASISDPDSVPPSSSEKRDHPGLNSSSQPPEEEPTKISEMAEGLDVAPQSRGLEEGEMSEYSYEEAEVRPHLAEEAINWQRTFSVNPVDFELLRSDWNDLRCNVSGNLQLAENEVIDVISQFMERLNERNRGIYTLARIVNVEKRRDSARGNRYLVELLLMEGGKRLVRLSEYIYLLLHRSRFEEGIESREGTVPSSHRTPSKIPLPSGSSAQTHTTTPWSTSWAKPLLCQPIMLQWRHDVMVHFVVPVKNQARWVQQFISDMELLHRETKDENFSVIIVDFQSDDMDVEQALKESTVPRYEYLKREGNFERSSGLQMGVDTIEDSHSIVFLCDLHIHFPHNILESIRKHCVEGRLAFAPIVMRLDCGSSPLEPDGFWEVNGFGLFGIYKSDFDKIGGMNTEEFKDHWGGEDWELLDRVLQNGLEVERLRLRNFYHYFHSKRGMWNVPVKRASQG", "length": 1167 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FFR8-1", "protein_name": "Ubiquinol-cytochrome c reductase complex assembly factor 5", "gene_name": "uqcc5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLRKSQNLKYMLSLVPGKKRFGVYRFLPVFFCIGGVMEWIMINVRIGRETFYDVYRRKQSERAYQQKTEEGLIMLTDSQAK", "length": 81 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9PUW9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r143", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PUZ0-1", "protein_name": "Apolipoprotein L 11b", "gene_name": "Apol11b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWNEISEDIRKVECRTFEKVIDNATEDLITDLRSLITEDGAWNGFVEAVELSSEEGEALRDALKERLAQDPTDENDRPQREQQKERFLREFPQLKKKLEDHIRKLRDLADKFDQVHKDCTISNVVSTSASAASGVLALLGLVLSTVTAGASLALSASSVALGATSSVSSFTTTVVEDSMTLSYESEARNLIGASMNVLEEILSIMPKITCKFYNTVADLVKAFKTLKGQIQTIRRARSISRRGAQARNLTSTGRSSGQGVSQMTRGARIRAGVFTSVFLGWDVYDLVTKQRICMMGEKQSQVEHCGTWLASWRRTFRNLSRSTMLCSQTCLSDALP", "length": 337 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PV04-1", "protein_name": "Eukaryotic initiation factor 4A-III", "gene_name": "Eif4a3l1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATTTRMATSGSARKRLLKEDGMTKVEFETSEEVDATPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIMKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACVGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLTTRAIKMLVLDEADEMLNRGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTNKFMTHPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCITKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNLADLI", "length": 411 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVP9-1", "protein_name": "Predicted gene 4884", "gene_name": "Gm4884", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSENLQSSPFFGTESTLHPSLPLLSNSKQPAGTVCNFSRVSTPDVSSAWLLPSASSTSLQPLMVVQMETSLGLPPSGQTYCQLQSPELCNTCVQVSQIRPPAVNGDKALTAPIHSPSQFLALPPAPSLEQPENKTMPEIKEGTKENQDTPVLTLEHPDLQQPLHCTDTESLRQKPDSDNAHLGCICMGPKELVGLENEIGSSFDFKDITRFGADIQLPQLLNTLTDIDQDQSCENWRVTSGLFDQVRENKHKSFELLEGAPQAKFQHWDLVEGEGAVGVAGASDRAIDNMAKHPEGKAPKGPPSKNRRARKQEQERPSGPENKSKKTQELKQSRNRVKAEKEPSIPKTKRKRNPPELSQNSFKKPRTNLAMHMLESVQVFHPLGKKSEKKTGISSFRGLRTFTSNKDSGPGSVTTTVLNMPCESQGPPKSPGKVQSAESSVGKDCLSPSQYELPPAGKVKLVPLPFPTLDKPQSRPASRKPLSLALRRPTAVYPVQHHSHSVQPTTLRPAQPPPASSSLIASAKPAPPISSSATGPNVTNPNQSSAVPQLATSRPVPYRASSHTSFQRELVSAARNKVPSPPRPVPYRASSNTSFQRELVSAARNKVPSPPKPQTQYLLHDFSRQPIPWKKVDILGPVVSQPITKEQRPEREAMKRRSQQERENAVKNPSTGKLQIFLQRERDMEISQYYGYAM", "length": 694 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVW0-1", "protein_name": "Major urinary protein 8", "gene_name": "Mup8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCVGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKVHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNAMDLVPEHVLVLTRQIAASRPENEEWPEPPVLSGDFSPGLHHHPFLSIQHPQYKFCDLHSILSH", "length": 235 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVZ7-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKYFCLPRFSIISMLTGNGSFVTEFVLAGLTDRPELQLPLFYLFLIIYTVTVVGNLGLIILIGLNPHLYTPMYYFLFNLSFIDLCYSSVSSPKMLMNFVFEKNSISYEGCMTQLFFFLFFVISECYMLTSMAYDRYVAICNPLLYKVTMSPQVCSMLSFASYGMAFAGASAHTGCMLRLIFCNANVINFYLCDILPLLQLSCTSTYVNEVVVLIVVGINITVPSFTILISYVFILANILNIKSTQGRSKAFSTCSSHIMAISLFFGSGAFMYLNHSGSMNQGKISSVFYTNVVPMFNPLIYSLRNKDVKIALKKVMMRVHSRFIS", "length": 325 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW18-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r257", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW59-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b50", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALANGSFVTEFILLGLTDQPDLQMPLFLIFLIIYLITAFGNLTLIILIVLNSHLHTPMYFFLFNLSFIDLCYSSLITPKMLMNFVLEKNIISYMGCMTQFYFFGFFAISECYVLTAMAYDRYVAICNPLLYSVAMSPKMCSYFILGSYFMGFSGAMIHTGCVMRLTFCDGNTINHYFCDLLPLLQLSCTSTYVNEIELFIVTGKDIIVPTVIIFASYGFILSNILKIRSTSGRSKAFSTCSSHIIAVSMFFGSSAFMYLKPSSAVSMNEAKFSSIFYSIVVPMMNPLIYSLRNKDVKVGLKKTLSRMFSHNLISL", "length": 316 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXC3-1", "protein_name": "Cytochrome P450, family 2, subfamily c, polypeptide 69", "gene_name": "Cyp2c69", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDPFVVLVLCLSFMLLLSLWRQRSARRNLPPGPTPLPIIGNYHLIDMKDIGQCLTNFSKTYGPVFTLYFGSQPIVVLHGYEAIKEALIDHGEVFSGRGSFPFFDKVSKGKGIGFSHGNVWKATRVFTVNTLRNLAMGKRTIENKVQEEAQWLMKELKKTNGSPCDPQFIIGCAPCNVICSIVFQNRFDYKDKDFLSLIGKVNECTEILSSPGCQIFNAVPILIDYCPGRHNKFFKNHTWIKSYLLEKIKEHEESLDVTNPRDFIDYFLIQRRQDKGIEHMEYTIEHLATLVTDLVFGGTETLSSTMRFALLLLMKHTHITAKVQEEIDNVIGRHRSPCMQDRKHMPYTNAMVHEVQRYVDLGPTSLVHEVTCDTKFRNYFIPKGTQVMTSLSSVLHDSTEFPNPEVFDPGHFLDDNGNFKKSDYFVPFSAGKRICVGESLARMELFLFLTTILQNFKLKPLVDPKDIDTTPKYSGFSKIPPKFQMCFIPVE", "length": 491 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXM9-1", "protein_name": "F-box and WD-40 domain protein 24", "gene_name": "Fbxw24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLSSFPMMEIFSYLDAYSLLQVAQVNKNWNALASNDFLWRKLCQERWLFCDMVTLQLLGKETWKQFFVYRTWQEHVKSRAIPEDFTYKEIPLECGVRGYAGYISGCALTRNGQGKSVVCMVSSKNKISTWDISESVITWVSPVQPASIKLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLAGDILGNLYIFRIPDLHLISTVNVFPCGFDKIDCSPQKKWVLLSQNHPCIYPKVFYMSSLLRTSEFSDPVSTVLEFSLCKRAFWTPRREDRITLMSRRGRPIVTRFETFDMKLEENGNKTIVKGDLVASFSLQDYNENPKWMGVSDKSVIVCSTGSSLLLFSMKGLHLQTFQYSPEMIVRLWVDPVHVIITCNDGSIDVYMWEERSLLLKMCYRLQNGRHLPPFGFIKNLLCDDVSIVQLMIDRQGPCFLMAYTLNICS", "length": 466 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q069-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r157", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCHFEVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q0V3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r68", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGVAIIKENQTQSKMDFWNMGIKILFLSQTTTGILGNFSLIIYYVVNYIVHTLKPTDLILMHLMTSNALMVLSTGVLHTMAAFGLAHLLNDLGCRLILYIQRVGRSTSIGTICLLSIFQAITISHRVSCYKGQKIKSSKYIGYSISLLWVLHMFLNFILFVDIFIKRNRNNMTSDRDFKYYSIVERNEFSDSLYVALVVCPEIFSSVLITCSSGSMIGILYRHKQRVQHIRSFHVSSRNSPEWRATQNILVLVSTFLAFYTLSSVLQGCIALLNNPNWWLVNITRLTSLCFPTFAPCVLMSHYSFMPRFSLVWTWNKTS", "length": 319 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1C7-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A2", "gene_name": "Speer4a2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWMGETREGRKDADLPSKSNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHNLEMENMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIHQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 252 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1N7-1", "protein_name": "Predicted gene 8126", "gene_name": "Gm8126", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNRNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKITQSINDTIEKYKEFIEDKDSYSFMHTYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEENRFCHESSKNIHPKY", "length": 198 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q328-1", "protein_name": "RIKEN cDNA 5430401F13 gene", "gene_name": "5430401F13Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASSRILLVLLSIALLALTSAQRVNEDDGSALQEEDALEIGDSNQQHDDIHERLNEIKNHFQDQISQHGKEAIKSKKGKNGPRSRRSSDDDNLEVQDHQSGNEQAGGGQGGRGRSELKGQNGKGSQKGKKGKGGQQEQKGKGGQQKQKGKGGQKTKRGKGGQRSQQDNVQEVYQE", "length": 175 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q346-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r160", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSKLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q366-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4f2", "gene_name": "Speer4f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTMCVRLRRLFQRANVDGRETREGSMDAGLPCERNEGRRRWTWRMWMAHRQTSSPVPVTSNQFEKEEEELMEEIQLISQEKNGLRDYLNLTLGSKITRLNQSYEELKLKQKELMTLQHDLEMATMEAREENEELKKEINFYSNLHSRALMENNLIKKKLMTLQQESKEVQAEWASIQQHLDVNLSGKDEQENNSILDTQEHQVSETARELGLATDQEDSILQDELPPQEAPAEELSPQEAPAEELPPQEAPAEQLPPQEGPAEELPPQESPAEHHLQHPQSFSDESSYITYPEWE", "length": 295 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q3G0-1", "protein_name": "Zinc finger and SCAN domain containing 4B", "gene_name": "Zscan4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPIPDNAQMPVDTTQDRLLATGQENSENECNTSCNATEVNVGESCSGNEKDSLLITQKEQNHEHEEGNVVCQFPRGARRASQDTSSHHVDFPSALTPADVPMEEQPMDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKTDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQPISDPVLGKNHEANLPCESHQKRFHRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCITCQKIFKRVSDLRTHEIIHMSEKPFKCSTCEKSFSHKTNLKYHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 505 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q4E0-1", "protein_name": "RIKEN cDNA 5031410I06 gene", "gene_name": "5031410I06Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q501-1", "protein_name": "Predicted gene 2237", "gene_name": "Gm2237", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENVDEGETRPTEKEEGILSHEKGRRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSPAESRTWH", "length": 211 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q5G7-1", "protein_name": "Oogenesin-1", "gene_name": "Oog1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGYIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSAGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFSLGDSEKLDEETIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPYCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELDSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPLECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVELL", "length": 496 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q6D7-1", "protein_name": "RIKEN cDNA 1700024B05 gene", "gene_name": "1700024B05Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESHDNPVSAGRTSSQNCNITNHMKNMNKLDDMKFYIRKINAELEELFRILDIDMNTDLNYRMNTEFTIIKSQHEKTMLDMEKMKQSISDSIDKYKEFIEDNDSYSIRHTHLLKECNQLKEKVRMLLNENRKLLVEQADQEASFGEEKSSVMRPARTYIPSAKQQQL", "length": 167 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q7M8-1", "protein_name": "Predicted gene 5796", "gene_name": "Gm5796", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQSGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8A4-1", "protein_name": "F-box and WD-40 domain protein 28", "gene_name": "Fbxw28", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSVPMMEILSYLDAYSLLQAAQVNKNWNELASSDVLWRKLCQKRWLYCYMFTLPLHGLETWKQFFFDKTWQEHAKTRAKPEDFTYKEFPVEFEFRAHPWYISRHGLTRNGQEKSAVCMTSMNRISTWDIHEGAMTWESPKQPSYIVWMTTLPEMQIAVTIDMQSTIKLWDCHNKEVLASKTGLFFGCKLLQSEFTKDGPIVLVGDACGNLYIFRIPDLHLISKVNVFPYSIDELYFSPQKKWVFLIGHRLNDLTKVFYMSSLLRPSEFSAPVSTVLKVPVIRKVFWTPRREDRITLMSLILPKNITKFDTFDMKLEGIGNKVTIQGYLTASFSLAEDEGRPDYFGVSDKDVIVCSTRFSLLLFDINGLRLQTFHYCPEEIWRLWVDPVHVIVTCDAGSLDIYAWEKRSLLLRKCYRLRNRNYQQMSGYIIKTLCDDMSIISVANNSPKPCCLMAYTLSVCS", "length": 466 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8I6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r55", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDLVPKNPPTDLKCKLAHFFHMVARGTNMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVRYSCYSCWLFSVLNNAYIPMNVRGPKKSHNDSDSQGKRMCSISVVNVDMNYLQFSYDIIFIGIMVWTSVSMVIHLNRHHQRMHYIHNPNQSNRGHAETRAAHTILMLVVTFVSLYILNCICVLFHVSFVESRRWLRNVIEFLALSFPTISPLLLIFRDPRGPCSLYFNVGLEIHVTGKVITEEQ", "length": 310 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8L6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r132", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8T0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSFKNVLYFQTGLGVLANTVLLFFYVFIILGHRPKPTDLISCQLSFVHIMVVLIGGDILLADIFESLNIGNDFKCKTTFYLFRVMRGLSICITCLLSVFQAVTISPNTSVLAKFKQKVKKYMTHVFLCIWFFNLSFSTNQIFYVGGFTNVSETNQMQVTKSCSLLPMNYIIRGLIFTISISRDVFLVGVMLTTSVYMVIFLFRHQRQCKHLHSFSHPRESPEKRATQTIMLLVSFFVVLYWMDFIISFTSEMLRMYDPVILTLQKFMMYAYPTITPLVQISSDNRIIIMLKNIQSKCHPSFSLKDFFFFI", "length": 311 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8V7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r173", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSALNKALKTTEEVALQIILLCQVGIAAVANILLLVHNLSPNFAGPQLRPKHVILAHITVGNLLIILLTGFPSNIIVFVPRNPLNDLNCKLEYFIRLVARSANMCTTCVLSTYQFIVLVPGKWSRMILRGNTSTFVHYSCNSCWIISVLNNVYIPIKISGPWNTDNDTDLNSKWVCSMSGFELVMVFLRFVHDTMFISIMVWTSVSMMLLLYRHHQSLKHIHRSNGSLGLQPEARAAYTILMLVVTFVCFYLLDCMCIFFHISFVHFRVWLRHVNEILAASFPTLSPLMLIFRGPKKISAKGINTENAFINSH", "length": 313 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q9N3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r152", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFASKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFGSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAETRATHTILMLVVTFVRFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QAN3-1", "protein_name": "Predicted gene 1979", "gene_name": "Gm1979", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPPESNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QD93-1", "protein_name": "Granzyme K", "gene_name": "gzma", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDICRNLIVFHFLVFTFFKVTVCSDVSIVGGKDVKKALSWMVSIQVNQNHKCGGILIHKEWVLTAAHCKEDSYSSVTVLIGSLSLSKGSQRIAIHNYEIPETFNKKTKKDDIMLIRLSKKVKAKPYKIPKKEKDVQPGTKCVVRGWGTTDYKGKQASDKLQMLEVLVVDRVQCNRYYNRNPVITKDMLCAGNTQQHRGTCLGDSGGPLECEKNLVGVLSGSHGCGDPKKPTVYTLLSKRHITWINKILKQQFNSTRF", "length": 257 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9QLQ1-1", "protein_name": "Defensin, alpha, 35", "gene_name": "Defa35", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHDELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F1LPT0-1", "protein_name": "Gap junction protein", "gene_name": "Gjc3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCCSFLRQLLARESQHSTPVGRFLLPVLVGFRLLILVSSGPGVFGNDENEFMCHLGQPGCKTICYDVFRPLSPLRFWAFQVILMAVPSAIYVAFTLYHVIGYWEVPGRNKEQEAQICKGGRCKDVSGAMSLKLLWAYVAHLGVRLVLEGAALGVQYHLYGFKMPSTFICREDPCIGSTTCFQSHPSEKTILLNTMFGISGACLLFIFLELVLLGLGRVWKTYRHKLPLFKNLSTSERSVRHKDTTDDLSVVETKEPF", "length": 257 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LT33-1", "protein_name": "Cytochrome P450", "gene_name": "Cyp2b14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVFLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFIDTYLLHMEKEKSNHHTEFHHQNLVISVLSLFFAGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVISSHRLPTLDDRIKMPYTDAVIHEIQRFADLAPIGLPHRVTKDTMFRGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDANGTLKKSEAFLPFSTGKRTCLGEGIARNELFIFFTALLQNFSLASPVAPEDIDLTPINSGAGKIPSPYQINFLSRCVG", "length": 495 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LYQ4-1", "protein_name": "Alpha-1-B glycoprotein like 1", "gene_name": "A1bgl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLLVLLEPLASLTLTCKVCEPSKDLHRILHLSSMETACTLSLALPPTLPSASLIFSASGVHTLILLRVRLNHSLILLSLIHTGPLPRPWLSANPVPWITPGLRTFLLCQGTVRDVVFMLRREGDDGNKEKEQGIFQVHEPGNYSCNYYTNTEYTPSKPSGTVTIKEYVIPPPPMLTSLESSTVDEPEMTQMSLLCVAPLSDVEFQLRQGEREMKVLIVSTSPERASFYLKLSDMGDHSPFTCRYRLNRMTAWSEDSKPVQLMWSDETLPEPVLTVEPSPHQSFEPGSTVQFRCTAPKAGLRSEAGLRFGLHLEDLYDHRLLQTQKSSGNETVFQLRNVSATDSASYSCIYTELTPPYSGSAPSDFVILRVNGPPPPPKLQALWTGKVFAGHDVVLRCQSDVTGVIVELLRDGKFVPYRILRVLNNYSDLGLHSVGPQHTGNYTCRYTSWLPEPVQSEPSNPVELLVEGMASGVVVVGFCLLIFPGLCILVNCAI", "length": 495 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M6N1-1", "protein_name": "Zinc finger protein 945 like 1", "gene_name": "Zfp945l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTASLVNVSKCLLTFRDVAVEFSMEEWECLNYSQKTLYRDVMMENYNNLLFVENHCKYKKVLDQDPNSIVHNVNIYEKAYECNELVKMTHESSQGTPFKTKHKDASLQISTLNRQKIGNTRDEPCKFKDCINFLNVFVIRQNQRIYIGEKEPTTIEYENHYNSKHEVMLKQSNSTGNKPHIFRKYGQCFKIYSSFSRYQNDHTSEKFYKCIKCRKSFLHLSQLKVHYKIHYRKYPCKCTACSKCFYHTFGFKRHYSIHPEVNTYKSSDCDKSFIYYSSLRKHQKIFGGERHYECNEGLRSLYTVFQPVYYYIPHIGEKAYKCSECEKCFTRKYHLTVHQRIHTGEKPYKCGECDKCFTRKYHLTDHQRIHTGEKPYKCSECKKCFTRKYHLTDHQRIHTVEKPYKCSECGMSFMKKYHLRSHQSIHTGEKPYNCSECDKGFTYKGHLRRHQKIHTGEKPYKCSECAKCFTENSKLRRHQRIHTGENLYKCSECDRCFIENNKLRSHQKVHIGEKPYKYSEYDKCLTQKGSLRSHQLIHTGEKPY", "length": 544 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M7A9-1", "protein_name": "Large ribosomal subunit protein uL6", "gene_name": "AABR07026048.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MANRLAHRPIQWRNFLSQDSLDQDTMRKKTILSNQTVDIPENVDITLKGRTAIVEGPRGTLRRDFNHINVELSLLGKKEKRLRVDKWWGNGKELATVRTICSHVQNVIKGVTLGFCYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVWMRTNVACSVSQAQKDELILEGNDIELVSNSAALIQQGTTVKNKDISKFLDGIYVSEKGTVQQADE", "length": 219 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M9J5-1", "protein_name": "Uncharacterized protein", "gene_name": "Esp1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ITFLPVTLFLIILLWPSMITEGRVLTQNQKELSISADHNKNHKSDLDKIEFQGQPNIQKAVEMTICASDKDQTLLEDQANANQDKQLYKDSHLLCGRSLDHIVK", "length": 104 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1QDL3-1", "protein_name": "Novel nacht domain containing protein", "gene_name": "LOC560232", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEDKHTPGDLDLSTGCSSVHQNRAEAEPSCVSMKSDVSMDPPTNFKSGNTGPAVSSRKRKRAEAEPSCVSMKSDASMDPPLKFKSKNTQPAVSVDRDDQSGDLLQDSLQPEHDELQRVKEQHKTTMKNKHERLFEGINHGETQTLLNRIYTQLYIIEGESEGVNEEHEVIQMEKRARTKPSQHTPVYCNDIFKASAGAGHEVKIKKEKAQIKTVLTKGIAGIGKTVSVQKFILDWAEGKANQDVDFMFVLPFRELNLIRDHQYSLHRLLLDFHPELEDLEPKIYEQCRVVFIFDGLDESRITLNFSDEEKVCAVTESSSVAVLMWSLLKGDLLPSALIWITSRPAAAHQIPSRYIKRLTEIQGFTEPQKEEYFRKRISDEHQASRIISHIRRARSLQIMCHIPVFCWISSTVLQKLLEEDVSAEIPQTLTEMYIHFLLIQINMRKQKYEERDPEKLLQSNRGVILKLAEVAFRQLMKGNVMFYEEDLIESGIDVTDALVYSGICTEIFKEESVIQQRKVYSFIHLSFQEFLAAFFVFYCHLTKKRELLELILGYSYDQYLQSSSEKSLYDLLSSAVDEAVRSSNGHLDLFLRFLLGVSLESNQRLFQDLLTHTEESSESIRRITQYIKDQIKSDDYFKRAAERFINLFLCLLEVKDQTLAREIQEFVKSDKHSEEELSPAHCSTISYMIEMSEEPLDEFELQKFNTSAEGRLRLTTAVRNCRRAL", "length": 725 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QGM0-1", "protein_name": "Galectin", "gene_name": "lgals1l1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPTVLIQNMAFKVGQTLTLTGVPKPESPEFTIDIGNSSEDIALHINPRFDAHGDQCIIVCNTFQNDCWCEEHRDENFPFVQGEEFQIKITFTNEEFLVTLPDGSEINFPNRQGSEKYKYMNFTGQARIQGIEIK", "length": 134 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QMQ9-1", "protein_name": "Uncharacterized protein LOC541480", "gene_name": "si:ch1073-398c20.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MADIKQESDDIRIAEVFTLKQEDPEEQTDLLPLRKEFQGLDNVKEEEALVEEHQDITPAEKRITCSETENTTQKASEKTGSRSSFTCEQCGRDFAKQGTLNNHMRIHTGEKSFTCQQCGKGFTQKRTLRNHIRFHIEAESLSCQQCGESFTQKQDLTDHMRVHTGEKSFVCDQCGKVFLRKDGLEKHLKNHHKEKPHVCPCGKSFTDKTKLEEHTKTHTGEKPHTCDKCDECFSGKYDLIRHMRFHSAETPYICQQCGKSFALKRVLMTHVKIHTRDRPFLCKQCGKCFYRKDNFNRHVRVHTGEKPYACSECGKSFSERFQFNEHSRTHSGVKRFSCEQCGRGFNRKTELKRHMRVHTGEKPYMCPQCGKTYAFKTGFDIHMLHHNAEMPYICPQCGERFSVKQRFDVHMKIHAGNSDK", "length": 420 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1R1Q6-1", "protein_name": "Uncharacterized protein LOC641576", "gene_name": "zgc:152710", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLIWTQFGVKHKNVKCKVRVIHGEEGSWSSEEVREEPEVSSPPPSPECVDYYSVLGVSNDSNEEEIRKAYKRLALRYHPDKNSDADAEDKFKQIAQAYDVLTDPEKRNIYDQQGLTKGGVAPTCNKTDPSHNSKADAHSWHMFFNFDLDSDDDLFNPFTRNPLPHLSRHHGNKGGLKPAGDAEVHDLSVSLEDILMGVTKRVKLTRLRQTDKHTLKPEERVFDVEVKKGWKEGTRITFPNEGHQMLGHAPNDLAFVIKEKKHAHFRRDGSHIVYTCTITLREALCGCTVNVPTLDGQMKPLPCSDVIKPSSVRRLIGEGLPRAKNPAQRGDLLVEFQVVFPDRIPPSSKEIIKHSLGQC", "length": 360 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RA39-5", "protein_name": "[F-actin]-monooxygenase mical2b", "gene_name": "mical2b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGETEEERTSQAGQLFENFIQATTCKGTLQAFSVLCRQLELNPSDHRGFYSSLKTAVTFWKAKGLWGKLDKRAGHKEYSKGRACADTRCLIIGGGPCGFRTAIELALLGAKVVVIEKRDTFSRNNVLHLWPYTIHDLRNLGAKKFYGKFCAGSIDHISIRQLQLMLLKIALIVGVEVHVNVEFVKLLEPPEDQSTDGQGWRAEIRPADNPVSDYEFDVIIGADGRRSTLDGFRRKEFRGKLAIAITANFVNRNTTAEAKVEEISGVAFIFNQKFFLELKEETGIDLENIVYYKDNTHYFVMTAKKQSLLDKGVIINDYIETERLLAFDNVNQEALLSYAREAADFGTNYQLPSLDYAINHYGQPDVAMFDFTCMYASENAALVREKSHRQLLVALVGDSLLEPFWPMGTGCARGFLAAFDTAWMIKGWAQGKEPLDLLSERESIYRLLPQTTAENISKNFEQYTIDPATRYPNLNSSCVRPHQVRHLFISGEQDLSSLERSGQTRRSVSISRRESEVRPGRLLLWCQNQTQDYRGVNVTDLNTSWRSGLALCALIHRQRPELIDFDSLNEADCAKNNQLAFDVAEREFGIQPVTTGKEMDAERGPDKLIMVLYLSKFYEMFHKSTQSVTGLPKEIDANNGDCSSKTANSLYNSINHARKRIPKLDKKLEESDVNRKRKKASSHHEELMSCQTAPPAGEREEQKENKVRSMATQLLARFEENAPSCALRRQSDSESDSDADRPVSLDLTENPRFARPKIEPTHPSTTPDKAKWQPSPYLRLLESNTRSETLHTEHYVESQSSHRLTEIQSECQYSSVSSAYKSSERRPRSPLIPFTPTLSPMMHCLQQLEEQVIQQRKREPLNRKSIKERAQKLSSLFTGNPAQPQTDESSPAVSPSSPPQTIPESSTLSCLLSPAPSLTHKQCSEASETHLKADKHTEIRRVERLDPSKQRTVGKVSSAIGVKAATLAILYETDHRPNNPITLSLTEARRCAESGLVSVRKEFSASLGGSDTCVFCQKRVYIMERLSAEGFFFHRECFRCHICGCSLRLGAHTFDSQQGTFYCKMHFSQRKTSTRHRRGEIQDGGIRSSSITISNHTSTDGTRGQPSGGEFDSSTQQDLQTLPDSKEIISVSEVKDSSKKADPADSAPACPDSPLQKVKRSTAKGEITNKNILWKKKIRSTLPLVLMKKFHRGKPEDKTEVLAEEDGNSDFEEIHESLSSKKPSNPSTDSNCLPTKDNSSTPLDEIPKIPLYRTHVLPEYPKPSSSSPEPIVTSISSDPISFSPKKKLTLSLSEKEKLLNWDLTNPGKSGAEEQQQQHVKPSISLQHDHPEPTHPQPEPAPPLFGFQQWANNLRKSFSKGSNPVVLRRNRPMKARPLSEGSFNVGAVFQDEERCGSLVDEGEARPRTESEIASLLEQVALGSKTSRGTKDDMASLPPRKLNFFSSLRIKRVEGAEQSRGEGQKDILSILSRFRNKASAQQQQQQKSNSSSEDEQEPKLTHSGALQKKKEKIAIRQTKSDELKRLHRAQVIQRQLEEVEEKQRSLEEKGVALEKVLRGENGDDGSTDEAALLQTWFKLVLEKNKLSRYESELMIFAQELELEDTQSRLQQDLRRRMATEDCEKSASELVEEQNILVEIMKVVEKRDKLVSLLEEQRLKEKAEDRDLESLILSRGYQFHWT", "length": 1679 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RXL1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152495", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFTICNDSHSDFILLGFSDKPYLEKILFWVVLIFYCLTIIGNLVIILVSLKDPKLHIPMYYFLSNLSLLDLCFTSSCVPQMLVNFGGPEKTISYIGCAIQLYVFLWLGATECVLLVVMAVDRYVAVCHPLQYTTIMHPKLCLELAILAWGTGLIQSLTQSPATLQLPFCSNRRLYDIVCEVPALIQVSSADTIYNEIQMSIASIILLVVPLVIILSSYGAITKALLRVKSTEGQKKAFGTCTSHLLVVFLFYGTVTAVYLQPKSHYAHEQGKFLTLFYTVITPTLNPLIYTLRNKEVKGALIRLGKKTWDDLCWTIA", "length": 317 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD0-1", "protein_name": "Transcription elongation factor A like 3", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRQVKHLRSGSLPTPGLSVTSPSPTARPATPRTACLFPALCKTRKGEGTCPESLQDKKRRKNLNMEKLCKENEGKPESEGKPEDEVEPDNEGKSDEEEKPEVEGKSAHEGKLQNEGQPEDEGKPEDEGKQEKQGKSEDEGKPPGEGTMESQAKPESEPRAAEKRPAEDYVPRKAKRKTDRVTDDSPKDYEEDLQERHLGSEEMMREGGDLSRAQEELRKRQKMGGFHWMQRDVQDPFTPRGPRGVRGMRGGGRSQRGLHDIPYL", "length": 264 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "LLVVVLVTYLLTLVGNTVIILIASIDPNLKTPMYFFLTHLSLVDICLTTSIVPQLLWNLRGPAKTITTLGCAVQLYVSLALGSTECVLLAVMAFDRHAAICKPLHYAAVMNPRLCQALAGVAWLSGVGNALIQSTVTLWLPRCGHRRLHHFFCEVPSMIKLACVDIHTNEVQLFIASLVLLLLPLALILTSYGHIVKAVTRIKSVQAWRKALGTCGSHVMVVSLFYGTITAVYIQPNSSYAHTSGKFISLIYTVLTPTLNPLIYTLRNKDVKGAMRRLFRRDLGS", "length": 285 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S4M2-1", "protein_name": "Small ribosomal subunit protein uS13", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSLVILEKFQHILRVLNTTIDGWQKIAFATTAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVEHVITIMQNPGQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLHEDVERLKKIRAHRGLRHFWGLRVGGQHTKTTGRRGHTVGVSKKK", "length": 152 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S6C0-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGNCLTPHTSEDLLVPASATHLGGRRRRARSRERRPRDQVPGWAPAAPLVQEEQVRVPQRISQIQCLPKGVYKRDGSQEKMEQEECAICTLDFVCGDPIRSLPCKHFYHLGCIDEWLTRSFTCPYCRGPADGPQPSSRDTP", "length": 141 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7I2-1", "protein_name": "Beta-defensin", "gene_name": "DEFB125", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MNLLLTFMICGLLTLVTKAGWNVERCWSYNIGHCRRRCLHLERYKHLCMNKRACCIPLSSDDPYTQWPLPPEDQTVGMKTPYFRPVSPGSELDDQITITITVDQESTGTEQDIEGTAISFQASTPIPENIEDTKFSDKANTLNLHKL", "length": 147 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7N4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152708", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDQTNSSVVTEFVLVGLTQSLGMQFLLFLLFSTFYVGIILGNLFIVFTVISDSHLHSPMYILLANLSLIDLGLSSTTVPRMISDLFSDCKTISFHNCMIQMFFIHVTGGVEMVLLIAIAYDRYTAICKPLHYLTIMNPQMCMLLVVAAWITGVTHAVFQFAFVINLPFCGPNNVGSFYCDFPRVIKLACIDNYGLEFVVTANSGFLSTGTFFLLVVSYIFILVTVRQHSSKDLSKAFFTLSTHITVVFLFFLPCMFLYVWPFPTKSLDTFLAIVDFAVTPVLNPAIYTLRNRDMKVEMRRLSRQVISSREMT", "length": 312 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SBB9-1", "protein_name": "DNA-directed RNA polymerase RBP11-like dimerisation domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MHALPAFESFLLFKDEKITIHKDTKAPNACLFTIDKEDHTLGNVIKSQLLKDPQVLFAGCQVPHPWEHKIIVPVQTTPDYTPQEALLNVITDLISKLSLLEERLRVAIKDKQEGIECWTGRGPAWPGPALTLALLQAPCG", "length": 140 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SBV4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100154723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MESENITVVTEFIFVGLTQSRNIQLLVFVLVFIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNPRACYALSLAQWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLLTLICFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPGIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKKLLINN", "length": 305 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SJ79-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259717", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTKGTEFILLGFAGQHKSWPVLFIVFLVTYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLEEKVDLCYATAITPKMLQNFVWTEHSISFIGCMVQLLTYGAFATSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLVIGSYFMGFLNASVNTSFTFQLNFCKSNKINHFFCDAPPILALSCSSIYFSIMLLAAFVGFNLTCTVSVVIFSYVFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 310 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SLL7-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSISKFLLLGLPIQPEHQGMFFVLFLVMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFLACIDNLLLAVMAYDRYVAICHPLHYAIIMREELCLCLLVLSWLLSCAYALTHTLLLAQLSFCADIIPHFFCDLDALLKLSCSDTSLSELVTFTAGAAVVIFPFIGILVSYGHIGLSILRVPSTKGICKALSTCGSHLSVVSLFYRTSMAVYLSSSGQFHDKDIIVSVMYTVVTPMLNPFIYSLRNRDMTLALGILFRNINIFSK", "length": 311 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SMZ6-1", "protein_name": "10 kDa heat shock protein, mitochondrial", "gene_name": "HSPE1", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTRVVLDDKDYFLFRDGDILGKYVD", "length": 102 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SRB7-1", "protein_name": "Large ribosomal subunit protein eL31", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAVVQKSGEKKRGRSAINEVVTREHTTSIHKRIHGVGSKKRAPRALKEIRKFAMTEMGTPDVRNDTRLNKAVWAKGIRNVPRRICAPLSRKRNEDEDSPNKLYPLVTCVPVTTFKNLQTVNEDEN", "length": 125 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SUB9-1", "protein_name": "Multifunctional fusion protein", "gene_name": "IL1B", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MATVPEPAKEVMANNGDNNNDLLFEADGPKEMKCRTQNLDLSPLGDGSIQLQISHQLCNESSRPMVSVIVAKEKPMNPSSQVVCDDDPKSIFSSVFEEEPIVLEKHANGFLCDATPVQSVDCKLQDKDEKALVLAGPHELKALHLLTGDLKREVVFCMSFVQGDDSDDKIPVTLGIKGKNLYLSCVMKDDTPTLQLEDVDPKSYPKRDMEKRFVFYKTEIKNRVEFESALYPNWYISTSQAEQKPVFLGNSKGRQDITDFTMEVLSP", "length": 267 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F2Z5L2-1", "protein_name": "Histone H2A", "gene_name": "H2AC18", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHHKAKGK", "length": 130 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F4IWB9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 28", "gene_name": "CYP705A28", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIMGRSCSEKNGEAERVRGLVIESLALSPKIFLGMIFHKPLKKLGISLFQKDIKSVSPKFDELLEKFLVEHEEKMEEDHYKANDMMDLLLEAMEMRMQNVNLCIKRVSNTKARKPPILFRYGKYSNNSLLLQELLVAGTDTSALATQWTMAELINNPTILERLREEIESVVGNTRLIQETDLSNLPYLQSVVKEGLRLHPPASISVRMSQERCELGGFYIPEKTLLVVNTYAIMRDPNFWEDPEEFKPERFITSSRSEQEDEMREEVLKYIPFSAGRRGCPGSNLAYVSLGIAIGVMVQCFDWRIKGEKVNMSETAGTIMLAMAQPLKCTPVPRTLNLLPSSLHIPSS", "length": 348 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J311-1", "protein_name": "Zinc finger (C2H2 type) family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLDGVELLLDLREMVSQSGFEKSTTCSGVIALRSNLQSKSSHKCKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYECKVCGKIFGCYRGLGGHTKLHRSTKRELASTQDENSLLDSSEAKKIVSQPSSFKVSQEEKFLHCVELKQDFSEPLSHSGALPSTLRSKLQTKTQWKSSCHCKICGKSFVCSQGLGNHKRVHREISGKLACKRKYTEDYNPFSDSLKAKKIVKKPSSFEVSQEEKILHCVELKQDFGELLAHSGFDKSISCSKSIKVKKVARKNEKTEDSTSLFGVFVGEMSQRLHGCKTCGRKFGTLKGVYGHQRMHSGNHNRIEDENGLERIWGLKKKSRVCSVSAFDRFKGSSFMAEIEKHEVIEAALNLVMLCQGVYDFASISNLPLGDGFMDLELKPCPLRRKLQKKSRSSYKCSICEKSFVCSQALGSHQRLHRWKLVPKPEYIEDDSSLLDSSEAKKIVSKPSSFEHAQEEKILQCVEPKLEFHEQLAHSGFDKFDTCSKIRFSALPSPPEAKKIVSQPPSFEVSVDEKILYRAEPKLNFSEPLAHSCFDNSSSYRSIICGKSFVCSQALGGHQTLHRSIKGQLAGTEDGNSLSVTDSEASKIVAQPSSYKSQGI", "length": 650 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JLV4-1", "protein_name": "Protease inhibitor/seed storage/lipid transfer protein (LTP) family protein", "gene_name": "DHYPRP1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASTTIILFLSFSIIPLLTIVRADNHSVYCPPPPPCICICNPGPPPPQPDPQPPTPPTFQPAPPANDQPPPPPQSTSPPPVATTPPALPPKPLPPPLSPPQTTPPPPPAITPPPPPAITPPLSPPPPAITPPPPLATTPPALPPKPLPPPLSPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIIRNVSDLDAVTCFCKSVGAPRFSLSPNFGIFFKVCGRRIPQGFSCPGPSPTISPPPLPPQTLKPPPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIVRNVSDLDAVTCFCKSVGARRFSLSPNFGIFFKVCGRRIPQGFSCP", "length": 375 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K5R6-1", "protein_name": "Cell division cycle 20.6, cofactor of APC complex", "gene_name": "CDC20-6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MMKSIALALCLTHHSPMVLSIVDYGDSQEKTIDSLWKKPHGSDLTWSGFSRVGVTEAYFAVPVDHFLTNPPSLRLSQTIYCRRGSSYVETEKVEEEDRDDFLKQVWFLTDNLVFFFVDIEEYIVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHESRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKKAASKKYTEPFAHVNHIR", "length": 428 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F5H284-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4D", "gene_name": "PPIAL4D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEATEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "F6R3J9-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1G", "gene_name": "Speer1g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNKKNKEVEIDWALIEKYLVDLNLNGQTGADQQP", "length": 157 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6X687-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1A", "gene_name": "Speer1a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKQSSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMPVTQNQKNKEVEIDWALIEKYLVDLNLNGRTGADQQP", "length": 157 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6YNI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRCRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILVGLQDYQDNKADVILKYNLDEARSLKAYGELQEHAKINETDTFGPGDDDEIVFDDTGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7AMQ8-1", "protein_name": "Exocrine gland secreted peptide 8", "gene_name": "Esp8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKVSAMTSFPVMLFLIILLLPSICSEERTQADPTISADNKKNFKTVVDLTDCQCERNFIESLESTLPASNQDQTLFENMTNQHKLNLSKMLSVLSKCCTQKQQVDTVHFRRMPHRIQSTKQNNYKKQVLYPMQEFMNLTRDVLVSRYV", "length": 149 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7C9P2-1", "protein_name": "F-box and WD-40 domain protein 25", "gene_name": "Fbxw25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSLPMLKILSYLDAYNLLQAAQVNKNWNALASSDVLWRKLCQRRWHYCDMVTLQLQGKETWKQFFIYRIWQEHAKTRAKPEDFTYKEIPVECGFYGYACYISGHGLTRNGQGKSVICMVSSKNTISTWDIHKSVITWVSPVQPASINLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLVGDTLGNLYIFRIPDLHLISTVNVFPYGFDEIDCSPQKKWVLLSKNYPHILPKVFYMSSLLRTSEFSAPVSTILEFSLCQGAFWTPRREDRITLMSRSGFPQITKFETFDMKLEGIGNKVAVQGKLIASFFLPYYEESPNWIGVSDKDVIVCSTHFFLLLFTINGLHLQTFQYCPETIVRLCVDPVHVIVTCNNGSLDVYAWEERSLLLRKCYRLQNKRPLPLYGFINNLLCDDVSIVQLMRDGHGPYSLIAYALNICS", "length": 466 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7ELE5-1", "protein_name": "NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial", "gene_name": "Ndufs7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RRTVVYTARARSQEKSGSEPLSLWFRFPLVSIWALDQNRNSLEDGPQRLSEGRGQDGGAGGSWLALCTDPGSAHRHSGSAAQSPPECGSHWEPEQSAVSKAGAGAVVPKPSHLPRSRAEYVVTKLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQADVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIKREQKLKIWYRR", "length": 271 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7F947-1", "protein_name": "Beta-defensin-like domain-containing protein", "gene_name": "Spag11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLSQRPPNVFRHVVDFLKKNQTHITQACSGNSGGRKASSSDLCGCALCLEAPSPHSQLSYKRACSSCPPTRGSSVPAVPSTAMKQRLLPSFVNLLLAALLLPGKAETWLRSWTQALSAVVTLGSSSASSINHLVTEPPSSPQDEFPAQGGNGSGLLHHRVKRFPPRTPPYHEPGPNYQIVNCKKNEGFCQKYCNFMETQVGYCSKKKEACCLHPF", "length": 216 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7FNC4-1", "protein_name": "Interleukin 36, gamma", "gene_name": "Il36g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSKYPHSPCTASGKETPDLGQVSDVDQQVWIFRDQALVTVPRSHTVTPVTVTVLPCKYPESLEQGKGTPIYLGIQNPDKCLFCKEVNGHPTLLLKEEKILNLYHHPEPMKPFLFYHTLTGATSTFESVVFPGSFIASSKIGKPIFLTSKKGEHYNIHFSLDII", "length": 164 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F8VPX6-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A1", "gene_name": "Speer4a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVNGRETREGRKDANLPPESNEGRRRWTWRMWMAHRQTTSSVPVTSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHNLEMENMEARENKQEFKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQERLVELNLSCKDEQEKTSNLETQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHTQNPPSSSDESSSDESSYSTCPAWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F8VQM2-1", "protein_name": "C-C motif chemokine ligand 26", "gene_name": "Ccl26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFFDLGLLVLLAIFLSVQLGVATCGSSIAMSCCPNFSYYVIPWSWVYSYKFTDKSCTSDGVIFFTKTGKQFCVQPGAKWVQRFISLVNTRNHL", "length": 93 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3GSG1-1", "protein_name": "Ferritin", "gene_name": "LOC100767129", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGFLRKSHRRQRHRCPLRVSRATVAYPLVFMTPPIISPPSQVRQNYHFDCKTAVNNHVQLQLHNSSVYLAMAFYFDSEDVAQKNLASFFLNKSHECTAQAEMFLELQNQRGGRISLGSIREADRNNWLGGLQAMECALQLELSTNQSLVALHQLASSKSDAHLCSFLKNHFLTKQVEVLKEISGYVTKLRQMGSPDDGIAEYLFGKLTLDDNKGK", "length": 215 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3GWA3-1", "protein_name": "60S ribosomal protein L18a", "gene_name": "LOC100764432", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKASGTLREYKVVGRCLLTPKCHTPPLYLMRIFALNHVVAKSRFWSQLKKMKSSGEIVHCGEVRPEVPLQVKNFAIWLHYDSRNGTYNMCREYWDLTVTQCYRDMGAQHCARTHCIHIMKVEEIASGKCQRPAVKQFHDSKIKFLLPHRVLRCQHKPHFTTKRLNTFF", "length": 168 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H156-1", "protein_name": "Prefoldin subunit 4", "gene_name": "LOC100773780", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MVATMKKAAAEDVNVTFEDQQKINKFARDTSRITEQKEIEVKKNHLQNLEDTFNDIMLADGDCFMTQYLIRDVLISHSQEEAQEMLEEAKKTLQEEIDALESRVGAIQWVLANLKVQLYTKFGSNINLGVDES", "length": 133 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H2T6-1", "protein_name": "Histone H4", "gene_name": "LOC100757199", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H8X2-1", "protein_name": "1-acyl-sn-glycerol-3-phosphate acyltransferase gamma", "gene_name": "Agpat3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGLLAYLKTQFVVHLLIGFVFVVSGLVINFTQLCTLALWPISKQLYRRINCRLAYSLWSQLVMLLEWWSCTECTLFTDQATVDHFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKVLAKRELLCVPLIGWTWYFLEIVFCKRKWEEDRDIVKEGLQCLSDYPEYMWFLLYCEGTRFTETKHRISMEVAASKGLPPLKYHLLPRTKGFTTTVQCLRGTVAAIYDVTLNFRGSKNPSLLGILYGKKYEADMCVRRFPLEDIPADENDAAQWLHKLYQEKDALQEMYKQKGVFPGEPIKPARRPWTLLNFLCWATILLSPLISFVLGVFASGSPLLILTFLGFVGAASFGVRRLIGVTEIEKGSSYGNQELKKKE", "length": 376 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HAB3-1", "protein_name": "40S ribosomal protein S15", "gene_name": "LOC100759804", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAEVEQKKKRTFRKFTYCGVDLDQLLDMSCEQLMQLCSTRQRLLLNCSLWRKQHSLLKSLRKAKKKVPPMEKPEVGKTHLRDMIILPEMAGSMVDVYNGKTFNQVEIKPKMIGHYLGEFSITYKPVKHGGPGVGATHSSRFIPLK", "length": 145 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDI6-1", "protein_name": "Lipid transferase CIDEB", "gene_name": "Cideb", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEYLSALNPNGLLRSVSTMGSELGRRVWNSGPPPQRPFRVCDHKRTVRKGLTAATRQELLDKVLETLLLSGVLTLVLEEDGTAVESEDFFQMLEDDTCLMALERGQSWSPRSGMLSYGLGREKPKHSQDIARITFDVYKQNPRDLFGSLNVKATFYGLYSMSCDFQGVGPKKVLRELLRWTSSLLQGLGHMLLGISSTLRHVVEGAERWQWHKQNHLRS", "length": 219 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDS5-1", "protein_name": "Histone H3", "gene_name": "LOC100773314", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HGI3-1", "protein_name": "PHD finger protein 6", "gene_name": "Phf6", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLVSENQKVAAHHKCMLFSSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEETFNEHELEPSSPKTKKKSRKGRPRKTNFKGLTEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEETEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGRLAIDQQLTQQQLNGN", "length": 364 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HJW3-1", "protein_name": "Calcium homeostasis modulator protein 6-like", "gene_name": "LOC100774768", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEKFKAVLDLQSKHRSALGYGLVTLLTAGGEKIFSEVVFQCPCSATWNLPYGLVFLLVPALALFLLGYALRTRTWRLLTGCCSWSASAQSSSGLQRVFVCAQISAAAALPPLTWVAVALLGGSFYQCAVSGSEAMARHLCKGRDPSCAAKLPQVPCKKQEAEMQDILSQLKAQSQVLGWILIAAIIILLLVVKSVTRCLSPVSYLQLKFWEIYLEKERQILQGEAMEHATQLAKENVRCFFDCTNPKDCSTPSSKAWQQISALYTFNPKNHFYSMLHKYVNRKDMSGSLRSVEGDAVVPVLGFVDASGMATTHGV", "length": 315 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQ40-1", "protein_name": "Eukaryotic peptide chain release factor GTP-binding subunit ERF3B", "gene_name": "LOC100767578", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDLGSSSDSAPDCWDQVDMEVPGSAPSGDGFTSASTAAAEAAEAEAQRQHLSMAFSSQLNIHAKPFVPRVSAAEFVQSFLPGSAQPPAPTTSSSDETCTGAGDPQGKRLGWGAPVEPSKDGPLMSWEGSNSAVTMELSEPVVENGEVEMALEESWELKEVSEAKPGGSLGDSGPPEESGKEMMEEKEVIRKSKSMAIPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDRRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKYLIVLINKMDDPTVDWSSERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDSLPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGIVSDDAETDFVAPGENLKIRLKGIEEEEILPGFILCEPSNLCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD", "length": 631 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQN5-1", "protein_name": "Transcription factor 19 isoform X1", "gene_name": "Tcf19", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLPCFQLLRIGGGRGGDLYTFHPPSRSGCTYRLGCRADLCDVALRPQQEPGLISGVHALLHAELQGDDWRVSLEDHSSQGTLVNNVRLPRGHRLELSDGDLLTFGPEGQAGTSSSEFYFMFQQVRVKPQDFAAITVPRSRGEAGTGFQPMVPSQGAPQRPLSTLSSAPKATLILNSIGSLSKLQPQPLTFSRGGGRPQSLAVPTQPGEVGASPPAPPTRNRRKSVHRVLAELDDENETSLSPLSVLMEPRKKLRLEKAALVSSGRD", "length": 266 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HWQ5-1", "protein_name": "Zinc finger protein 219", "gene_name": "Znf219", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEGSRPRILVGHLEPSPPAFDGELDLQHYSNGPGVSTGSPGMGAVGWSETRAGERRFPCPVCGKRFRFNSILALHLRAHPGAQAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLLLELEERALLREAQLGRARSSGGMQATPATEGLARPQVPSSSAFPCPFCKGKFRTSAERERHLHILHRPWKCSLCSFGSSQEEELLHHSLTAHGASERPLAATSTPEPQPPPQPEPRSALEPEPEPEPRPEPEHEANPAPTPAPPEEPPAPPEFRCQVCGQSFTQSWFLKGHMRKHKASFDHACPVCGRCFKEPWFLKNHMKVHTSKLGPLRAPGPGSTPARAPQPPDMSLLAYEPLGPALLLAPAPTPAERREPPSLLGYLSVRAGEVRPNGEGADPGAGRSYGGGFRPLPSALPNRARRHRTEEPEEEEEVVEAEEESWARGRSLGTLTSLHPHPGEGSGQSAPAVGAQARPTGTQEENGLLVGGARSEAGRGATGKDCPFCGKSFRSAHHLKVHLRVHTGERPYKCPHCDYAGTQSGSLKYHLQRHHREQRSSAGPGPPPEPPPPSPRGAASLQPQSGAKPTQASATWVEGTASTRPSSSGTGAGSRRKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGSGGALHRCLFCPFATGAPELMALHLQVHHSRRARGRRQPRADTSPPYVRAPSGETPPSPPLEEEGSPGLSRSGEAGLGGQER", "length": 725 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I071-1", "protein_name": "Large ribosomal subunit protein uL29", "gene_name": "LOC100753244", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAKIKARDLRGKKEELLKQLDDLKVELSQLRVAKVTGSAASKLSKIRVVQKSIVRVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMHRQLTKHEEKLKTKKQQRKERLYPLRKYAFKA", "length": 122 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I1Z3-1", "protein_name": "DNA damage-inducible transcript 4 protein", "gene_name": "Ddit4", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MPSLWDRFSSSSSSSSSSSSGTPATDRPPRSAWGSAAREEGLDRCASLESSDCESLDSSNSGFGPEEDSSYLDGVSLPDFELLSDPEDEHLCANLMQLLQESLSQARLGSRRPARLLMPSQLVSQVGKELLRLAYSEPCGLRGALLDVCVEQGKSCHSVAQLALDPSLVPTFQLTLVLRLDSRLWPKIQGLLSSANSSLVPGYSQSLTLSTGFRVIKKKLYSSEQLLIEEC", "length": 231 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IAH8-1", "protein_name": "Guanine nucleotide-binding protein subunit gamma", "gene_name": "LOC100755128", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASNNTASIAQARKLVEQLKMEANIDRIKLSKAAADLMACCAAHAKEDPLLTPVPASENPFREKSFCTIL", "length": 70 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IG76-1", "protein_name": "Olfactory receptor 7E24 isoform X2", "gene_name": "LOC100765597", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYILALFGNLLIILTVSSDSHLHTPMYFFLSNLSMIDIGYISTTVPRVIVDIQTHCPVISYVGCLTQMSLIIIFACMDDMLLSVMAYDRFVAICHPLYYQVIMNPSSCGVLLLGSFLLSLVNLLLHYVAVLSFSNCEDIFEISNFFCGPSELFKLACFDTFTTNIVRYCAGALFGLLPISGIIFSYFKIVSSIMRSSSSSNGKWKTFSTCGSHLSIVCLFYGTALGMYFSSSLSLSPKTNAVASVMYTVVTPMLNPFIYSLRNKDIKTALRKILSRTF", "length": 278 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IGD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100770882", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGANSSSLTPEFFVLNGIPGLEDAHVWISLPFCFMYMIAVVGNCGLMYLIGHEEALHRPMYYFLTLLSFTDITLCTTTVPNTLCIFWFNLKKIGFKACLAQMFFVHTFTATESGMLMLMALDRYVAICYPLRYGTILTNPVIAKASLATFLRSVAFILPFTFLTKRLPYCRGNTIPHAYCDHMSVAKISCGNVKVNAIYGLLVALVVCAFDIFCITVSYTMILRAVMNLSSADARHKAFSTCTSHICAIVITYVPAFFNFFTHRFGGHTIPHHIHIIVANLYLLLPATMNPIVYGVKTKQIRESVIKFFSGDKSGITEIKGLQNK", "length": 326 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3INQ1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100763177", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MFCNTSTPGHSTFLLTGFPGLEASHHWVSIPINLICVVSILGNSIILFLIRTDPALHEPMYIFLSMLAASDLGLCASTFPTMVRLFWLGIRELPFDLCAAQMFFIHAFTYVESGVLLAMAFDRFIAIRDPLHYATILPHSAVAKVGAAVLIRAILLNLPGPILLRRLLFPQVSVLSHCYCLHCDLVGLACSDTRINSLVGLVSILLSLGLDSSLIMLSYVLILRTVLSIASPGERLKALNTCVSHLCIVLIFYLPKLGLSVLHRVEKHSYPALAVLMANLHFLVPPFMNPVVYCIKSKQIRQGFLKRFQQKRVDVS", "length": 316 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3MYE2-1", "protein_name": "Large ribosomal subunit protein uL18", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGFVKVVKNKAYFKRYQVKFRRRQEGKTDYYARKRLVIQDKNKYNTPKYRMIICVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAVAYCTGLLLACRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGALTCYLDAGLARTTTGNKFFGALKGAVDGGLSIPHSTKQFPGYDSESKEFSAEVHRKHIMGQNVADYMRYLTEDEDAYKKQFSQYIKNNVTPDMEEMYKKAHAAIRENPVYEKKPKKEVKKKRWNRPKMSLGQENDRVAQKKASFLRAQERAAES", "length": 295 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3MZM9-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC107131211", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELRRRLLIIVIGTLITGYMVTCTCLLHYRCDSKEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3UW31-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r176", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVTLQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQFVTLAPGTWGRVMLPGRAPNFLRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDSNSKSKWVCSTSGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFVDSRVWLRRVKEILSVSFPTFSPLLLIFRDPKDPCSLLFGC", "length": 304 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3UY92-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r158", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQLLLLCQFGVGTVAKVFLFVRNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVARSTNLCSTCVLSFHQFVTLVPLNRGKGKLVLRASVTNMASYSSYSCWFFSVLSNIHIPIKVSGPQIKDNNTDSNRKLFCSTSGFSVGTVLLQFAYDATFMSIMVWASVSMVLLLHRHRQRMQHILTPNQDARGQAESRATRTILMLVVTFVSFYLLNFICIMLHALFMHSHFFVRLVSEILTAVFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3V9M0-1", "protein_name": "Cystatin S like 1", "gene_name": "Cyssl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MACLLYTQLFLLNTFILFLNLSLNPVLGQILAGIEKSIIEEEGALEALNFAVSEYNENNSDLYLSRVVEVKTVKTVQQQIEAGKTLLFDVILGKTACLKTQDDLSDCPLNEPTDLQEREFCSFEVHLPDWANAINLLSSICNRI", "length": 144 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3X693-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "RVFLPLLLLGVILPGGDNEDGPTSFHLIQISTFVNNTWAQNQGSGWLDDLQIHGWESDSGTAIFLKPWSKGNFSDDEVTELVDLFRAYFIGFTREVQDRVNEFQLEYPFVIQVTAGCELHSGEAIESSLRGALGGLDFVSIQNHSCVPAPDGSSRGQKFCALTTQYQGISDIIERLLSETCPRYLLGVLDAGKAELQRQVKPEAWLSSGPTPGPGRLLLVCHVSGFYPKPVRVMWMRGEQEQPGTQQGDLMPIGEAAGLNCRVKHSSLGDQDIILYWGHPTSIGLILVAIIVPSLILLICLAFGVLRFMGSHRIGHD", "length": 317 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3X9Q9-1", "protein_name": "Predicted gene 6526", "gene_name": "Gm6526", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGDQGETRPRQKESAIPSCKKRRMKSFWGRHMSAGKKSSQNCNITNHMKNMNKLEDMKFYIRKINAKRLELFPILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKMTQSISDTIETYKEFIEDKDSYSFTHSYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEEKRFCDESSKNIHPKC", "length": 198 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G5E8X8-1", "protein_name": "Oocyte maturation, alpha", "gene_name": "Omt2a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTLVFTKVHLESWVYKGLRGQHDSILELLKENLHHYLCIEFDEGLNDTVVYIIGFKFFAMFAMFVIVSLACNLRTKRNRARAWARGLQSPVWWNRRYFI", "length": 100 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ46-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLSFMSSLLENILYFQAGLGVLANIFLLVFYIFIILGHRPKPMDLISCQLTFVHIMMFLAGENFWLANIFESLNVENDFKCKATFYTKRVMRGLSICITCLLSVFQAVMISHRNSLLAKFKHKLKIYMINALFYIWTFNLSLSSNLIFYVGGFTNMSQTKQLKVTKSCSLIPMNYIIRGLILTVISSRDMFLVGVMLTTSTYMVIILCRHQRQCKHLHSTSHLRASPEKRATQTILLLVVFFVIMYWVDFIISSTSILLWMYDPVIMIVQKFVVNAYPAITPFVQISSDTRVIRVVKNWHS", "length": 303 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ88-1", "protein_name": "Vomeronasal 2, receptor 3", "gene_name": "Vmn2r3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMAIRKKCLILELTVFLCVELYAQYEDQNMTCRLMRKFNLTGYVEAENHHFVIGGQFPVHYRTIPTSDSDEEPESPMCEGFNFRGFRWMKTMIHTIKEINERKDILPEHTLGYQIFDNCFSTTKAMESSMVFLTGQDEYKPKWRNSTGKYLIGIIGAGGSTMSLAGARILLLNDVVQVGYASSSSILTEYLNVYRTIPSDKFQTEAIVNLIRHFGWVWIGAIASDDDYGKHGVKSFRKILETNNLCIAFSETIPKVYSNEKMQIAIDAVKSSTAKVIVLYATDFDLSPFVLEVIHHNIAHRTWIATEAWITSALIAKPEYFPYFGGTIGFAIPRSVIPGLKEFLYDVHPSKDPNDVLTIEFWQTAFNCTWPNSSVPYNVDHRVNMTGKEDRLYDMSDHLCTGKEKLKDLKNTYLDTSQLRITNNVRQAVYLMAYGLDRLIRVLIKEYREYLLHPKILAFMSYKLFEYIRKVKFTTHDGRKIELNVHGDIENGYYDILNWQMDNTGDIAIVKVGEYKFTRSKYELVLPKNSTLFWNTESSRLPDSVCTKVCPPGTRKGFITGQPVCCFDCIPCEDGYVSEKPGQRLCNPCSEDDWSNAEKNKCVPKHVEFLAYEEALGFTLVILSIFGALVVLAVTVVYVIHRHTPLVKANDRELSFLIQISLVITVLSTMLFIGKPCNWSCMARQVTLALGFCLCLSSILGKTISLFFAYRISISKTQLISMHPSFRKLIVLLCVFGEIGVCASYLVLKPPSMFKNIERQNVKIIFECNEGSVEFLCSIFGFDVLLALLCFVTTFMARQLPDNYYEGKCITFGMLFFFIVWISFVPAYLSTKGKFKVAVEIFAILASSYGLLGCLFLPKCFIILLRPKRNTDETVGGRVPTVDRSIQLTSASVSSELNSTMVSTVLDE", "length": 909 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BKT1-1", "protein_name": "piRNA-mediated silencing protein C19orf84 homolog", "gene_name": "Gm52993", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDELEDGALSNGDNLSLPSAGTESWPTSATPGLPPSLLSTLDPTHLGLPEQLASVTVPIRLDTLSYLLHSALLGTYNLQQSLPPCSCTAQPSHIWPDTVRRPPRRSGQARGGWEVRRRPSRGWGRGRGRGRVWAQSQRGPERAEERERNMAGEPGAGPSTPPVTPPSQDGQKEAGGLSEDWEADY", "length": 185 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BLP0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLTNILYFQAGLGILANTFLLCFYTFTILCHRSKPMDLTSCQLTLAHILFLLAGGDNWLAVILESLNIENDFKCKAIFYTNRVMRGFSICITCLLSVFQAVTISPHTSLLAKFKHKLKTYIIYAVFYIWFYNFLVCSHLLVYVGGFNNVSETNQMRVTESCSLFLMNYIISGLIFTVTTFRDVFLVGVMLITNAYIVIILFRHQRHCKHLHSIRHLRVSPEKRATQTILLLMVFFVVMYWVEIIISSTSLLLWMYDPGFLTVQKLIVTVYPTITPLVQISSDKRVINVLKNLQSKCQQIF", "length": 302 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "I3ITL1-1", "protein_name": "Gap junction protein", "gene_name": "gjc4a.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSWDFLTHLLDEISNHSTFVGKIWLTLLIVFRIVLTVVGGETIYDDEQSEFVCNTLQPGCKNVCYDAFAPLSHVRFWVFQIIMISTPSVMYLGFAMHKIARMADNEYQPRKHKMLSTVHQRMNRDYDMVDEMTEEVPMIPEEIEPSEKDNKSAASTKTTAASDAAVKHDGRRRIKRDGLMKVYVLQLISRVAFEIAFLFGQCILYGFEVSPSYICTRSPCPHTVDCFVSRPTEKTIFLLIMYVVSVLCLALTVLEILHLGIGGLRDSFRSRANRRLPVHRPSTSTICHRLSSAPPGYQAVQKKYSSGKLKAEFLSDSGRESLADDNTTRDLDRLRRHLKIAQQHLDQAYHTEEVGASHNSGPDSKSIAAEQNRLNQAQGGFGSTEEKVFKEAHA", "length": 394 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "I3L8A5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "FPSRQERTMRRENQSSISEFLLLGLPIPPEQQGVFFALFLGMYLTTMLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFSSVTVPKMLMNMQTQDQSIPYAGCVTQMYFFMFFACLDNFLLTSMAYDRYVAICHPLRYTSIMRGGLCTLLVTVSWILSCANALCHTLLLAQLSICAENTIPNFFCDLGALLKLSCSDTSFNDLAIFIAGVATIMLPLLCILVSYGHIGATILKIPSTKGICKALSTCGSHLSVVFLYYGTIIGLYLVPSSSTSSHKDIVASVMYTVVTPLLNPFIYTLRNRDMKGALEKLFHKAPVLS", "length": 320 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3L8Z8-1", "protein_name": "LRRC37A/B like protein 1 C-terminal domain-containing protein", "gene_name": "LOC100514982", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MMTLELEKLILPSHMACCLCQFKSNIEVVCKTVKLHCDRCLKNSTRCDKETSLGDVEGSFMKVLQARKKNTSTELMIEPERPSSDKSGVSLSSFMNEQLDFSDESDVISALNYILPYFSEGNLEDVESTLLPFIQLLFSNVAEADIPPGHLKTHTGNPPVNPESGTSGYTNKLRQLRFLENLLDAEIQEKIDEVMKKEKTAMLIYSNILSPKLRRQILRKKLETARTQAESLEEIESVDKRPLKVNRVLKGPRGIKKRHFRAMRRQSIRRKETAQPFVETTTKGSKLGGPSARELEQLWVVQRPRKRVADSLQKEPSFGREHKAEVSSFLKQYSRGRPAASIHPKAPATVKKTSEDLSDTLFVLVDANARVKNRKASETISYPRKIDSFHPSHSPVLHRTPEPQNRQAFRDKGSSYRLLLALRPLSSAVRSLINSPSQEASSPSGELTLQEQPSPESFSPSEPSTEHIISEKDTPQVVFEELPTSGTTTLSGPIPGPTAQGTLPTEYSATTADNVMPTGQHTSAIQWEHHNVGTDVASTPTSFISPGVSSPGSQFEAQLNQQLQSLIPNNDVRRLISHVIRTLKMDCSEPQVQLACAKLISRTGLLMKLLSEQQEAKASKAEWDTDQWKTENYINENTEAQGEQKESSELTKDVPGYGYNNKLILAISVAVVLMLLIVILCLIEVYSRRRTLREGKVGRRRGFFGFLLRKRRSGESESEGFFWRRRPLWLRDTYRPLSATRKKNMAEKLHDKESSDEEEIFHKGAGEVSEAPADVILTIESDVEDLGEETDTAPEGPPE", "length": 799 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LBH4-1", "protein_name": "Large ribosomal subunit protein uL11", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPPKFNPNEIKAMYLRCTSGEISAKSALAPKIGPLGLSPKEVGDDIAKAAGDWKGLRITVKPTIQNRQAQMEVVPSASALIIKAPKELPRDRKKQKNIKHSGNITFDEIVNIARQMRRCSLARELSGTIKEILGTAQSVGCNVNGRRPHDIIDDISSGAVECQAS", "length": 165 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LC12-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFGANLTIFHPTVFILLGMPGLEIYHTWLSIPFCLMSIVAVLGIGALILVVLSESTLHEPMHVFLSMLAGTDNLLSTTTVPKALAIFWFHAGEIAFDACITQMFFIHVAFVAELGILLAMAFDRYVAICALLRYTAVLTPSTIVKLTLAIWGWGIGTIFPIIFLLKRLPYCRTNIIPHSYCEHIGVARLACADITVNIWYGFSVPMASVLVDVAFIAVSYTLILQAVFRLPSQDAQHKALNTCGSHIGVILLFFIPSFFTFLTHRFGKNIPHHIHILLANLYVLIPPMLNPIIYGAKTKQIRDSLAHMLSRVGMS", "length": 315 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LEQ2-1", "protein_name": "All-trans retinoic acid induced differentiation factor", "gene_name": "ATRAID", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARPGFRSPSSLVPRAAALLLVLSVPRALALPEICIQCPGDVQNLSEVALYCKQTPELMLQGRCCLNGKGTILGLDLQNCSLKDPGPDFAQAHTAVIIDLQANPFEGDWANTFRGFTQLQTLILPQGVNCPGGINAWDVVTFYITNQTCQGQRTFATALGTQKRVLRMDLVLLMVLVSCSVFVLMASMATSVCARAHSHCSCSSVFWDPQHYPFPSCFGGLNAEKPRLHEPQRSSY", "length": 236 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "J3QM75-1", "protein_name": "Secretoglobin, family 2B, member 19", "gene_name": "Scgb2b19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLITGELSFQTTEACVPFFEGYASVVSGSRVWLYHELQSFDATAEEKVALEKIQGCYREERLRNILLEPKIMEAMVASPECRSYYSLNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMG8-1", "protein_name": "T cell receptor alpha variable 13N-3", "gene_name": "Trav13n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKRLLCSLLGLLCTQVCWVKGQQVQQSPPASLVLQEGENAELQCTYSTTLNSMQWFYQRPGGRLVSLLYSPSWAEQRGGRLTSSAASNESRSSLHISSSQITDSGTYLCAME", "length": 112 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QML3-1", "protein_name": "BTB domain containing 35, family member 29", "gene_name": "Btbd35f29", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHQGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKKVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDALTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMQ9-1", "protein_name": "Predicted gene, 20873", "gene_name": "Gm20873", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRESSSNTLRNIVGRRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPGLYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANLSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMS5-1", "protein_name": "BTB domain containing 35, family member 2", "gene_name": "Btbd35f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEDIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKKVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW5-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADIILKYSPDEARSLKAYGELPEHAKINEMDTFGAGDDDEIMFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW9-1", "protein_name": "BTB domain containing 35, family member 6", "gene_name": "Btbd35f6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLQTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QN64-1", "protein_name": "BTB domain containing 35, family member 22", "gene_name": "Btbd35f22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QNQ5-1", "protein_name": "BTB domain containing 35, family member 24", "gene_name": "Btbd35f24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKDTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIYDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP08-1", "protein_name": "Histone H2A", "gene_name": "H2al1k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTRSQRGELPLSLVDRFLREEFHSSRLSSSALSFLTSVLEYLTSNILELAGEVAHTTGRKRIAPEDVRLVVQNNEQLRQLFKPGGTSVNEDDN", "length": 105 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP87-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCNIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINETDTFGAGDDDEIVFDDIGDEDEDIDDI", "length": 144 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP96-1", "protein_name": "PRAME like 3C", "gene_name": "Pramel3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMDTKDPPTLLDLATQSLLSNEHAAIQALEEIPRELFVPLFTAAFTGRHKNILTAIVKAWPFACLHIGALSVQEPERELLKALIESLQFLPALNSATRSPKLRILDLRQDAGCKTVCPDISTNSTICFRSCAHSEHSIFKIEGQESLSSSKSEAQPSRLPMELIVDISLDGTLRERNFFALLQNKVEQSLGSLHLCCRDLQINNLCECRHALSHLDLKCVDHLAVDESPLTEVTKLLSHTIQLDSLSLSKIACRSLNGRTFRNFITQLSRMNHLKELSLSSFCLTDHLETVLRVLSADLEFLYLPFCGLSYSDFKFLSECSQVSHLKLLNVNNNPIYWEDCEPFYYLLQNVSSTLQHLKICYCFLTDSTISVLIPALTRCSQLRVLHFYSNQITMGMLMRILELLTPLKELKHVIYPIPVHCYGRWHFQGSLDRQKVEDVQRQLNLMLQEAERSDMNWITYSD", "length": 463 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QPI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLTKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGAGDDDQIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QQ02-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLESMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7GP63-1", "protein_name": "Large ribosomal subunit protein eL39", "gene_name": "RPL39", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL", "length": 51 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "K7N5V5-1", "protein_name": "Predicted gene 5862", "gene_name": "Gm5862", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N660-1", "protein_name": "Predicted gene 10220", "gene_name": "Gm10220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARKLGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPSWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r168", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNGAMKTTEEVALQIVLLCQFGIGTMANILLFVHNFSPLLTGCQLRPKEVICANMAVSSILILFMTVFPNNVFVAQRNLLNDLQCKLEYFVYMVARSTNLCSTCVLSTYQFVTLVPGNFSELMVRGRSPKVISYSCCSCWLFGILYNVYIPMKVSGPQNRHNKTSTKSKWVCFTSGFSVGIVFLSFAHDAIFISIMVWASVSMVRLLYRHYQRLQYIFPPHQGNRGYAEIRAAHSIVLLVVTFVSFYLLHCICFILHIVFVDSNLWLRHIGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYKKPVI", "length": 309 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Gm10670", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANDFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSMHQFVTLVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATNTILMLVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNLKHRRQLH", "length": 321 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6G6-1", "protein_name": "Predicted gene 16440", "gene_name": "Gm16440", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLCQKENGDEGEIRTTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKITKQRSKINELEELKLDMRKISNDMEEMGGILELYIYEDLNYRMNTEFNIIKSQHEKTMLDMNEMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLSEKVRILLNENRKLLVEQAGTQLSHEEEKRFCEEASKNICASSAKEQQCVNSSRNRNMAQTTT", "length": 218 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6J5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r127", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLTAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6P1-1", "protein_name": "Reproductive homeobox 2H", "gene_name": "Rhox2h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKRSINYLLDVGPEEDEENANGVKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGPAAPVAGLMDNSNQEDLSATGCAQEKETQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPKFRHLWRHNFNVLQLQELESIFQCNHYISTTEENRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6T9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r175", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGFGTAVNIFLIVHNLSPILNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCFLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVNGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFLDSRVWLRRVKQILDVSFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6U2-1", "protein_name": "Predicted gene 3542", "gene_name": "Gm3542", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSNITNQISNINKVEELKLHIRKTSNERKEMCGILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRKLLVEQAGTQVSCEEERGSLRRPARTSVPQVQRNSSFPKCETVQQKLEHGTDHDMISLKEKCWWKRTGCAQEIHHCCLSSLITMAVMGCMLLLYFGFLGMNRP", "length": 270 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W5-1", "protein_name": "Predicted gene 17019", "gene_name": "Gm17019", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRDTREGRKDADLPSERNEGRRRWTWRMWMALRQTSSPVPVISKKQFEKEEKKLIKEIQLTTEETNELRDRLIYVTEGSMNKRPYHRQNPLYEKLKLKEKEIMTFLHNLEMENMEAQENKQELKKETHFYRNLHSRLLMEENLIKKKSMTLQQESKEVQADWAIIHQRLVELNLSVKDEQENSNLETPEYQVSEAARELGLATAEEDSILQNELPGQEAPAEHHLQHPQSSSDESSSI", "length": 255 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r170", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGVGTAVNIFLIVHNLSPNLNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHHRLQHIQSTNQKLRVHAESRASHTILMLVVTFVTCYHLDCICTFCNISFLDSQLWLRRVKQILDASFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r94", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVIFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r103", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Y3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSIILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFYIHSRLFIRLVSEVLAAVFPSICLHNGVLLSY", "length": 295 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Z0-1", "protein_name": "Predicted gene 17026", "gene_name": "Gm17026", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "XRSSWVPKQACCPCSSGYFRERIEYTQTPDQGRRRPAAHHGGKGQETTGHGEGSAGAASPQAPTINDQEKRHERLEKLKRELQNIKNARDELQGILANYTNKDLNDRINFETFMLQMQHDQVMTDLKRMPQDISEALYKCKQLTKENQFYCFRNCHLLIESNLIQHKVRMLRKENRQLLREQIALEECNIETKILCKEGSQKIKDHYTKQQQI", "length": 213 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N701-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r159", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMSVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNTRGQAESKATRTILMLVFTFVSFYLLNFICIIFHTLLMHSHFFIRLVSEVLAAVFPSISPFLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N708-1", "protein_name": "Predicted gene 10128", "gene_name": "Gm10340", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSVI", "length": 205 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N731-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r57", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALNILLLCHVVVGTVGNILLFVHNFSPNLTDSRLRPIQVILINLAVANAFMLLFSTYSYDLIDFVPRKPPTDLKCKLAYFFHMVARGTIMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVSYSCFSCWLFSVLNNAYIPMNVSGPQKSHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFLGIMAWTSVSMVIHLNRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCIIILFHITFVESRLSLRHVTKLLSLSFPTISPLLLIFREPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N744-1", "protein_name": "Predicted gene 8104", "gene_name": "Gm8104", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNMNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIDFTIIKSQHEKTMLDMEKMTQSISDTIEKYKEFIEDKDSYSFTHTYLLKECNQLKEKVRMLLNENRKLLVEQADQETSYGEEKRFCDETSKNIHPKC", "length": 198 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N751-1", "protein_name": "Predicted gene 3696", "gene_name": "Gm3696", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPQEHLCPKCQGTAV", "length": 203 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N757-1", "protein_name": "Predicted gene 3667", "gene_name": "Gm3667", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRRLLVEQAGHKCPVGKKRGSLRKPARTSVSQVPRNSSVK", "length": 205 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7F4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r260", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGNSLKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVVRSTNLCSTCVLSVHQFVTLVPLNRGKGKLVLRASVTNMASYSSCSCWFFSVLSNIHIPIKFSGPQITDNNTDSKRKLFCSTSGFSVGIVFLQFAYDATFMSIMVWTSVSMVLLLRRHRQRMQHILTPNQNPRGQAESKATHTILMLVFTFVSFYLLNCICIIVHALFMHSHFFVRLVSEILTAIFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r163", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVMTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLKFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPNICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r242", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7H2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r256", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILGHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSLLVARSTNLCSTCVLSIHQFFTLFPVSRGKGKLILRASVQNLASYSFYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDDTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATHTILMLVFTFVSFYLLNCICIIFHAFSIHSCLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9JA28-1", "protein_name": "Interferon lambda receptor 1", "gene_name": "IFNLR1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWRIRVLATLCFLWQPRVHGQLPPPQNVTLLSKDFDMILTWTPGEGSPPDVLYTVRYESKTRMDKWIKVPHCRNIHSVSCNLTCVIPNFFIKFRAQVKATSGRFHSPWVKSQFKEYHLDVELAPPLLNVNVKENVIHVNATFPMAICVESLPWMYDFNLWEAGSEDKKQYKSIFRKKAVTIDTTALRGNYCFNARSSIQSIDFKHSKFSQPVCMQLNYEGEWKFPFSATIPVFVLLILLTSASIIWLLKQDAKHKKMPQTLDLSNCKIAGPTFCCELRENEFLTDCLICTDKPMSQGKKNKTLAQNNQMWMASFLPSSSSEEEEEEEEEDSSSFIPYTEMLQFPRKHFNFQTPRTADAETILDSTSGVLSVVGGSTLDLSALGFSFFPIRKNEMDTSGSQGNEKASHSHSSSLGRISLTDVRFPGPREHGQHGTDSNDCLEVSLLHTLMNSSCTRLPADEHCLYKKDHDFTICYQKPTLDQPVQVSENPLLNEDPSMEKFIYLQTLQVAEDEGFASDCDSGNFTEGTPPASTVLSDELRISDMEKRYDKKFKFKGYQHSHYMRRS", "length": 567 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "L7MU37-1", "protein_name": "Reproductive homeobox 3H", "gene_name": "Rhox3h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDSTQGTKVLPAEESRNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU51-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a76", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQSNNVTEFVLLGFTQDPAGQKALSVMFSLIYIVTMVGNLLIVGTVIASPSLGSPMYFFLASLSLMDAIYSTAITPKLIVDLLCEKKTISFRACISQLFIDHLFGGVDIVILLAMAYDRYVAICKPLHYLIIMNRRVCILFLVMAWAGGLAHALFQVLAVYNFPFCGPNIIDHFGCDIYPLLLLACTDTYFLGLSIIGNNGAMCIVIFTLLLLSYGIILRFLKNHSQEGRRKALSTCGSHITVVFLFFVPCIFMYVRPVSSFPIDKFITVIYTIVTPMLNPLIYTLRNSEMKNSMEKLLQKTLSPSRIRLSSCCLCY", "length": 318 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU81-1", "protein_name": "BTB domain containing 35, family member 17", "gene_name": "Btbd35f17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANTWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU83-1", "protein_name": "BTB domain containing 35, family member 18", "gene_name": "Btbd35f18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDQVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MUB9-1", "protein_name": "Reproductive homeobox 2G", "gene_name": "Rhox2g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGLAAPVADLMDNNNQEDLGATGCAQEKEKQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPEFLHGWQQSFNVLQLQELESIFQCNHYISTTEAKCLARSMGVSKATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X6-1", "protein_name": "F-box/WD repeat-containing protein 15", "gene_name": "Fbxw15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAIHLPCLPMMKILSYLDAYSLLQAAQVNKDWNELASSDVLWRKLCQKRWLYCDMDTLQLQGKETWKQFFIDRIWQERAKFRAKAKDFTYKEIPLMCGLFGYACYISGCGLTRKGQDKSVVCMVNSKNTISTWDVHKSVITWKSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNNLKSPCKSLKAVFTKDGPIVLIGDTLGNIHIFRIPDLYLISTVNVLPYGFDGIYCSPQKKWVLLSKKHPHILPKVFYMSSFLRTSEFSAPVSTVLKLSLYERVFWTPRREDRITLMSRSGFPQVKMFETYDIKLEEFGNKRIVKGKLIASFELQCHKVNPQRFGVSDKNVIVCSTESSLLLFDINGLRLKTFQYCPEMIVKLSVDPLHVIVICNTGSMDVYAWEERSLLLRKCYRLHIERPLPLYGFIYKAACDDVSIIQLITDELSLSSLTSYALNICS", "length": 466 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X9-1", "protein_name": "Demilune cell and parotid protein 1", "gene_name": "Dcpp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSAPEGKNITSIRVFLKGRLIVGIQLNYDDNKDGQVYGSTAGKEMVARLSKEEHIIAAQGTYTPSALTQIIFTTNQPRQLMVGYYVGNSEYSSFPNDPSHVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 171 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y3-1", "protein_name": "PRAME like 51", "gene_name": "Pramel51", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIHSKERKYRLGLLEPGVTAFPCPNMVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSPGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFTLGDSEKLDEETIFSLISQLPTLHCLQKLYINDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPFCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELVSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPIECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVEL", "length": 520 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y5-1", "protein_name": "Olfactory receptor", "gene_name": "Or11g25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLSSPSNSSTITGFILLGFAYPREGQILLFVIFFIVYILILMGNASIICAVYCDQRLHTPMYLLLANFSFMEIGYVTSTVPNMLANFLSDTKVISFSGCFLQFYFFFSFGSTECFFLAVMAFDRYLAICRPLHYSSLMTGRLRNTLVTSCWVLGFLWFPVPIIIISQMSFCGSRIIDHFLCDPGPLLALACSRVPLIEVFWSIIMSMLLVIPFLFIMGTYILVLRAVFRLPSREGQKKAFSTCGSHLTVVSLFYCSVMIMYLSPTSEHEAGMQKLVTLFYSVGTPLLNPMIYSLRNKDMKNALQKILRT", "length": 311 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N227-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r125", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSMKTTEEVALQIILLCQFGIGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFARKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N255-1", "protein_name": "Predicted gene 3099", "gene_name": "Gm3099", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCLKGNGDEGETRPKKKEEGILSHEKGRRKLFWRRHRSARNTSTQNSNITNQISNINEVEELKLHIRKISNERKEMCEILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMTQFIIGSMQYSMELIEDNYSYSIKEDHLLRECTQLNKKVRILLNENRKLLVEQAGTQVSCGEEKRFCEEASKNICASSAKEQQLP", "length": 205 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N259-1", "protein_name": "Demilune cell and parotid protein 3", "gene_name": "Dcpp3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSTPEEKNITSIRVFLQARSIVGIQFNYDDKDGQVYGSTAGKEMVARLSKEEHITGVEGSYSPSALTQIVFTTTQPRQLMVGYHVGIYQYSSYPDDPSFVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 170 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N270-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVIFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N273-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r118", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSVHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N275-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r169", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVALQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLHGRAPKFVRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKSKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSPNQKLRFHAETRAAHTILMLVVTFVTCYLLDCICTSLHISFVDSRVWLRRVKEILAVSFPTFSPLLLIFRDPKDPCSLPFSC", "length": 304 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N288-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r151", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQILLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2A6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r116", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVFLSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2B4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLGAVFPNICPLLLIFRDPKDPFSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2C2-1", "protein_name": "Predicted gene 2974", "gene_name": "Gm2974", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKERRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N474-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1E", "gene_name": "Speer1e", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "ARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNQKNKEVEIDWALIEKYLVDVNLNGRTGADQQP", "length": 154 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0QWR4-1", "protein_name": "Aly/REF export factor family member 14", "gene_name": "Alyreffm17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADKMDMSLEDIIKLTKIQQRRHDRPDSRVNRGTGSKRYRPAFTHGGRNRLAPYCRPKQLPDKWQHDLFIGGFRGQNHVDTGGKLFLSNLHFGVSDADIQLLFAEFGTLKKSAVHYDRCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQLATSQIDRQGRPAQSKNRGGMTRNPGSGVLSGGGTKKWTLGGSQGRGRGTIRNSKLQQQQQQQKQKQQQQQQKQQQKQQQKQQQQLSAEELDAQLDAYQEMMDTS", "length": 261 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0R3T3-1", "protein_name": "Peptidase S1 domain-containing protein", "gene_name": "ENSRNOG00000067174", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRFLVLCLILSLGDYGAFPLIQSRIHRGCKGERHSQPWQVAMYHYDKAVGWGWHPSPTTMSTSPSHNKVRLGQHSLDADGDTGQDVPVRHSIPHPLYNRSLQMPTFLSPDADNSHNLMLRQLREPANTTEAVRVTEEPTEEAKLGSRCLASGWGSTRPDKCMPGMLQCVDLTLMSSDVCTYAYSQRVTESMLCAGHQEGSRDTCMGDSGTTLICDRMLQGITSWGGNPCA", "length": 230 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R777-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASKSKEKTLGSHYKILSYLGQGSFGTVNLAWHLKTQALVAIKMLEISKETISSILSERAILETLHHPNIIRLFQVLITSSHVNFVLEYAPGGSLFELIKEGGPLQEEVAKKIFGQTVSAVKYCHNLDIVHRDIKPQNILTDAEGNGKLTDFGLATKFRPGTLLKELCGTKEFYAPELVLREPYNGKKTDVWSLGVLLYFISTGYCPFRGVTTKDMEKKIATGTYTIPTYFSGQLENLIHQILTVSPEMRPSIEDIEKHPWVRKCEVNIPTITCPDYKIVEMLCGMGYNANKILESLQKKKYDEPMAAYLILKDKVRQEIEHGTTTSDMPVDQGPLPPQSPAHHSVSGLPLKRRASEPNFGLLHIWPPGEQVARHNVARSVSMPPIALYGTKKQNSTSTSALHSRPVASPCVCNTILEIEIPLPTKQDFDMKTSSPPQRIGYFQRLCQRIRDCLSRLCCFLWAPKVHSPRKWLP", "length": 474 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9M1-1", "protein_name": "Olfactory receptor family 52 subfamily N member 1B", "gene_name": "Or52n1b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLLNVSSLTPASLILNGIPGLEEVNLCIFFPLFTMYSIALTGNFGLIYLIYSEEVLHRPMYIFLALLSFTDVLMCTSTIPNTLFISWFNFKKIDFKACLAQMFFVHTFTGMESGVLVLMVLDLYIAMCYPLRYATILTNVVIAKAGMLTFLRGVALVIPFIFLTKRFPYCKGNVIPHTYCDHISVAKISCGNVQINAIYGLMVVLLIGDFDIPCITVSYTMILWAAVSLSSADARQKAFSTCTAHICAIVITYVPAFFTFFTHRFGWHTIPSHIHIIMANLYLLMPPTMNPIVYGVKTKQIQKRVIRFFFKGRENSSHKF", "length": 321 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9X6-1", "protein_name": "Paired immunoglobin-like type 2 receptor beta 1 like 2", "gene_name": "Pilrb2l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAWILLLLLLAACLHTGNSAGYQKTQDYGVNQPEQLTGIQGGSIEIPFSFYFPWELAKDPQMSIAWRWKVFFGEVIYNSTLLFLHEHFKGRLIMNWTQGQTSGVLRILNLKANDQSTYFSRIFLQATEGMKLWQSRAGTKLIIHALSTTMASPSIIPSAVPTAGLENTRGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWVIFLWWKQRLPTARISHQVSLHHTPCIPQSSMSSLWESELVAAGFSCESHSWITPTSAMGARIPSPWNQGPPVCLWA", "length": 289 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RAD6-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f19f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSTNQSSVSEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILVISTDSHLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILSSQAISFSGCLTQLYFLCVSVNMDNFLLAVMAYDRFVAICHPLYYTTKMTHQLCVLMVSGSWVTASLNALLHTLLMARLSFCGDNIIHHFFCDVTPLLKLSCTATNLNELMILTEGAVIMVTPFVCILISYIYITNAVLRVSSFRGGWKAFSTCGSHLAVVCLFYGTIIAVYFNPVSSHSSEKDTAATVLYTVVTPMLNPFIYSLRNNDLKGALRKVVHRKI", "length": 309 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RBH5-1", "protein_name": "Surfactant associated 2", "gene_name": "Sfta2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPSMCLFLLLTLLCSSLAGPTKVTLQVKLTEASQAKTSQDSGFLDMLQKICLLLHLSPGTNVTLHHKGPPHHLTCRA", "length": 78 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCJ6-1", "protein_name": "EF-hand domain-containing protein", "gene_name": "AABR07013776.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADQLTEEQIAEFKEAFPLFDRDGDQTVTTKELGMVMGSLGQNPTEAELQDMISEVDADGNGTINFPEFLTMMARKMKGTDVEEEIREAFRVFDKDGYTSAAEFRHVMTTLGEKLTDEEVDGMIREADMDGDGQVIYEEFVQMVTAK", "length": 147 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCP1-1", "protein_name": "Leukocyte immunoglobulin like receptor B3", "gene_name": "Lilrb3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSTLTALAYLGLILGSENPVLSGAFTKPTIKMVPSNVVTTGKQVTIFCEGSSHAKEYRLHKEGSPDYLTPTTFLETENKAKFSISPIQWNNAGQYWCSYRSLTNKLRQSDIMELVVTGVILGEVTLSALPSYVVTSGRNVTLQCASQVVYDRFILMKEDEKFSTAMPSWKIYPVLWGAIFTLGPVTSNQRWRFTCYGYYLSSSLIWSKPSNHLELLVSGTLHKPILWAHPGSMVTSGSPVTIWCEGDQETQTYVLYRQGSLESWNRQTQKDYNNKAEFTIPSVTYLNAGHYFCYSYTSAGWSEHSDTLELVVTGVYKKPIFLALKNPIVNLGVTVTISCTSNQSFNCFLLMDDDQKIYRFFDLQYSYSGESLARFQVGPITSRQRWRFRCYGYYTDNPQVWSEASDPLDFLVSGNLQKPTLWAEPGSVIESGNSVTIWCEGTMETQIYFLYKEGSPSSWLRQTPKEPGNKAMFFIAFMEKHNAGQYRCYCYNFGGWSQHSDTLELVMTGVHHGKPTLSAFPSPMVTSGGNVTLYCASSTIYDWYIVTGQDLKFSRFQRAQFIPTEMSQALFSEISVASRKKGPFRCYGFNESTPHLWSEASNPLEIHVSGVSRKPSLLNQQGPVLAPGENLTLRCSSELSYDRFSLSKEGRSDLPQLSVSQSQTGEYYANFFLYSVDFSIAGQYRCYGASRFSSEWSAPSVPQDILVTGHPPITPSLSVNPGTIVSSGENVTLLCQSSIPMDTFFLFKKGDAYPYMHQRLKFQGPQCKAEFSLSAVTPNIGGIFTCFGSQSSSPYLLSHPSVPVEIKVSGLAKYQKSLIWVSVVFFLLFFVLTLFFFLRLWHQNKHRKGVQTKIDLQHPEGAVEPKSIVGHLQKSSRPAPAIQEEILCEKRWPGREITEVSASDATVKVTRSADNVELGILSQHQDDPSIHLYAQVKPARLRRAQTTSSSLFPKELQHSKHRQKNRDQVIDQQADTSQDSHAVIYAQLHIMTPRQGRQTSLFPGRIC", "length": 1008 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCQ2-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100361204", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQSSIP", "length": 328 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCW7-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb1l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAQLLLLLLSAACLHTGNSAGYPKKNVFSVDQPAVLSGVQGGSIEISFSFYFPWELAKVPQMSIAWRWKNYHGEYIYNSTQPFIHEHFKGRLIVNWSQGQTSGVLRILNLKENDKATYFSRVFLPTTEGMKSWQSVAGTQLIIIHAPSTTVVSPSIIPSVVPIAGLEDTRGKRTPSLLNLGAMVRMVVSKVVVIIALYGWVIFLWWKQRSAWSLLSFLTTWKSEEQMQMNTAPAPKEFK", "length": 252 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCY4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "AABR07000137.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSAPLGSLGRKSKNQSLGLDMLGTVLSTDSLSCTFTVKYRSSPGQCSVNGKPLLLFNDERQNSPVGKPEKKGNATKVCAELNQSLKDIFQKMMNLESWLFESKGNHTLQVTVQSQYNQGIFMDGCWVFTIDRQYPFYFYPKIMTWRESHPDASRTVSQWQNNRQVAQSLRTCSMGDFSQCLRKLLTDSREVPRSTITTLDPTQPSSAIQIPPTVDSASSVFTTWSQYIFVLILCLAILIINALIP", "length": 246 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RD07-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000064269", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRMMAMQMMTNSISDAMERYKELIQVNSSYNIRQSQLLREQAQLKNNIQILLNEKRELLVEETELPASSVEAKRLCEEAGMNICDPRAKQQQV", "length": 93 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RDP5-1", "protein_name": "Zinc finger protein 353", "gene_name": "Zfp353", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVAETPGASQTVPCNTQPSPVESSQLVSGQSSEMPTWKKTVMASACCNPQETACTQNSTAHPGKASDFYFGEPSETASFIQQVVSAEQKSSPAGSCLMNLSSTTKSCLSHPLKTEVLDTRKTLCNEGHWGRTLNSDKTLLIQITTMYESQWRTLGNHPVAPSGYHEGQAPNMDHLVDSVSNQTFIGDLEMEPSCNHVLYTDQFITSFSEQNPFGDQQRSPVADNRFYADQKILPNGYQTFYEPQMSTNYQITCVCGQNVCRCQEILLSGEHLLSEYQTSGYRYDQDLIVNLQVTSPIGGEPLHDSQIPNSNFDTTSCGTKRTTSSEEDNLAWHPETSLSSEETFLDQMRTSVDQNVYPSHNGTLKIEESLEPQVTSLSNQAPYVGESSDTSNSPLIQIQPQEISSASGLDQGQHPEIKLDLKTQSPVSLKNPHNSKRYCCTYQGCKKSYKKSQHLKDHMKKHTGVKPYMCNKPGCDWKFFRLVDLNRHKQKHSGERPYPCPMCNKNYSRFYYLKQHLRSHIQASPTTAT", "length": 530 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M9MSI7-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG42818", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MFIHQREQLPFKHNEQDPNYLAPVIQKRKPMDKDPRNPLKRLKFLQEFPTQSSKGDLDDLKYPTQLEGRHDSPKYDKTFHTEIHANNETDSQELENIILEKNLQDSKTEFQENRASQPKNMHSFQIPEAIESHFNNKELQNENDLHKGLKQQYRSGSEQDKSGPENVREIASKLILQWAENQRSLLDSFVKAITDVLKVHDSKLNMKINISPRDIMILKDMLKQLLESIMQLREGSTSTRARIVLNKWIETQKSLIDSFSQAIQNTNQNVDNIANVYEVMENLNKNLRELVILLSDKESFPTTESSSSQQTTSIYATTTFYLTSSTFGSTHPIVDENINRVNIMGNLIKGLRNIMVQMDETNKTSSSTSYTTTESTYIQPSTSTYLNAEVTTSHPTTSTYEVTNIITDESKIKDMFNLIKGIEDLISQYNGKHKFTSTTSLTGKSNSREPTMTTYSSAGGITSHSFTTTSPKTVTTSSSHSTTESSPSHPTTSNYEVTVFDQDSHKFKVMKNLIKELKGLIEHFSDTKNITSTTYSTGDSKSFQPTATTPDSTDRSSSQPITFPESTTSTTNLQSTITNHLSTESTSSQLNTTLSITGTTTPNLTTSTHDFKDQINDDDSKSLKHLIKILSDLVYSLNDKNNIKSTSQLTTESTFNSSINITNSTTVASSTFSTTESMAIHSTPYLSTREITVFQFNDVENINPIISNNSTTVTTNIHSSTYTTSTTDNTTSYPNLSTTESSPTFDSTISHSNTSSQTRSLGSYKDKIKNIVELLKKLRKIQKTLADKSKGQLSPMLISRIKAVLKQIVAGNIDSVNGDSTELEILLSTTVNPNEDTTDLTMEKLLKLFDDFERMYNVLLDDSIQSTTQSTTQNNTIFSTTYSTIFSTTQSISTTSPTQYALTSSTPNTSTTSHSSTPSSINNLRSDESNNHQPIVDAIQQLKMALYHDFYAFKKSQEERMEKILQLLNGKPIDRRTKTIAKPRTIRKKVSREIQKRNSDVKEDKIHHYKADKFIKNPKNGNQDSHIPKPILNSARSKIKDVPLKLSAIKVNGGLKHLPSKRKANEEVSAMHEIFPEPVSILPHK", "length": 1085 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "O08640-1", "protein_name": "Keratin-associated protein 14", "gene_name": "Krtap14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSCNSCSGTFSQSFGGQLQYPISSCGSSYPNNVFYSTDLQTPITHQLGSSLHSGCQETFCEPTNCQTAYVVSRPCQRPFYSQRIRGPCRPCQSTFSGSLGFGSRGFQSFGCGYPSQGFGSHGFQSVGCGTPTFSSLNCGSSFYRPTCFSTKSCQSVSYQPTCGTGFF", "length": 167 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O21032-1", "protein_name": "Large ribosomal subunit protein uL16m", "gene_name": "mrpl16", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIPNRQKFTKNHKRNLITKETRKTGLVLGNYGIKATETGYLKMKQMERIKGDLVKKLKDNMDIYFNFYPLFGLTNKGTARMGAGKGEVSEWYVLVKKGSIVVEFIKSRMTAGAMQKVIRYSANKWPIKVRMTQIKQGLYEKKI", "length": 144 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21042-1", "protein_name": "Cytochrome c oxidase subunit 1+2", "gene_name": "2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKILEIYDKQIAEKEGNIFIFISKWIISVDHKNIGTMYTNFSILAGIVGTLLSLVIRMELSTGNMLDGDGQQYNVIVTAHGLIMIFFVVMPAMLGGFANWFIPIMVGSPDVAFPRLNNISLWLIIVSFFLLLTSSCVGIGVGTGWTVYPPLSTMEYHPGHAVDVGILSLHIAGASSLLGAINFLTTVFNMKIAGLSWSKVSLFVWSILITAVLLVLSLPVLAGGLTMLITDRNFETTFFDPIGGGDPILYQHLFWFFGHPEVYILILPGFGLVSIILSKYSNKGIFGVKGMISAMSAIGFLGFLVWAHHMYTVGLDVDTRAYFTAATMIIAIPTGIKIFSWLATLWGGVIKITTPMLFVIGFLVLFTIGGLTGVVLANGGLDISLHDTYYVVAHFHYVLSMGAIFAIFAGYYYYYSIMNSTRLFGVVRYNEQLGRIHFWTMFIGVNVTFFPMHFLGLAGMPRRIGDYPDAYIGWNLIASYGSLITAFGLLFFVVNIFTPYIRRSVNIKNGAIILMGLDFARDWQIGFQDPATPIMEGIIDLHNYIFFYLIVVAVFIGWVMGRILWRFSYKWSYPTIGDIEIFKNFTAYNQIIHGTVIEIVWTLIPTVILYLIAIPSFTLLYAMDEIINPTVTIKIIGHQWYWSYEYGDNASNLIEFDSYMVYERDLAEGQLRLLEVDNAMVVPVKTHIRLIITSGDVLHSWAIPSFGIKVDAVPGRLNQIGLYVKREGTFYGQCSELCGVDHGFMPIKVQAVKLGEYFSKLNEK", "length": 764 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21049-1", "protein_name": "Cytochrome c oxidase subunit 3", "gene_name": "cox3", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKGFFENLFRQNVRSVINTGKKVGARAAAREIINQEWGYPLANHEVLFLTNVYQPKHMKRHPFHIVRGTVAPLAVTLPLGFFVLNYFGVISSKLGLLIALSSFIGGLVIWTISIIFDSLYDQQHTYEVKRGLVMGMMMFIISEVMFFFSFFWSYFYISLSPNIAIGCVWPPYGLTVYSYMGLPLLNTVLLLLSGAILTDGYTILTEQKAVHEKNEKVLAVEEAFKNLMNLYKTKNSINTLTFVDERRDKFFGKESRQEDKIAEQKLIAISAGVKELRDLDWDLYFFENPENIEPNYKEPTNLSVIEYALITIYLKKRNKVIKTRLYFTLLCAVVFLACQGYEYFFAPFSMNDGIYGSLFFLLTGFHGFHVLVGSILIGIITIRFIVGNFNLLNVGTNFQIYKNKSTGFACTLFYWHFVDIVWIFLYIVIYWWGSR", "length": 435 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O23373-1", "protein_name": "Formin-like protein 3", "gene_name": "FH3", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGRLRLAFLAISLVVFVCVSEEIFSRGGLNLLRFSVYGEDVAEQTWIHQNPRRKLISYPKKFSVSAPNLAFGPAPSFAPGPGPSFAPGPAPNPRSYDWLAPASSPNEPPAETPDESSPSPSEETPSVVAPSQSVPGPPRPPPQREKKDDILMKLIIAVASTAVLTFVFVALMFLCCFKRNCNNAVGSRDGPRDEGPLLRLSTGSTENSPTVASTSRKMFSVASSKKRSFLSRVSLKRNGHEFSTAESSSAAGLPPLKLPPGRSAPPPPPAAAPPPQPPPPPPPKPQPPPPPKIARPPPAPPKGAAPKRQGNTSSGDASDVDSETGAPKTKLKPFFWDKMANPDQKMVWHEISAGSFQFNEEAMESLFGYNDGNKNKNGQKSTDSSLRESPLQYIQIIDTRKAQNLSILLRALNVTTEEVVDAIKEGNELPVELLQTLLKMAPTSEEELKLRLYSGDLHLLGPAERFLKILVDIPFAFKRIESLLFMISLQEEVSGLKEALGTLEVACKKLRNSRLFLKLLEAVLKTGNRMNVGTFRGDAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGVRALRLQSRSFSSVKTDDSNADSSPQSVERYRSTGLQVVTGLTTELEDVKRAAIIDADGLAATLANISGSLTNAREFLKTMDEESDFERALAGFIERADADFKWLKEEEERIMVLVKSSADYFHGKSAKNEGLRLFAIVRDFLIMLEKVCREVKETTKTTNHSGKKESEMTTSDSNQPSPDFRQRLFPAIAERRMDSSDDSDDEEDSSPS", "length": 785 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O35698-1", "protein_name": "RNA-binding motif protein, Y chromosome", "gene_name": "Rbmy", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKRSATSAQTRSNTGLRGREPHRREISRNMPRGEPASSRRDEYPLPRDYGQSSNDRKYESTSRGYCDYGNYHSREESASKVFSDHAGYLGGRDRDFSEYLSGNSYRDTYRSYGRFHEAPSARGGNNRYDDYSNSQDGYGGRGEPYISNRSNIYSSDYERSGRQEVLPPPIDREYFDREGRQERGHSPKDGLYSASRESYSSNTKIWGIPWRSWRKQI", "length": 380 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O60309-1", "protein_name": "Leucine-rich repeat-containing protein 37A3", "gene_name": "LRRC37A3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTSAQCPALACVMSPLRFWGPWPLLMWQLLWLLVKEAQPLEWVKDPLQLTSNPLGPPEPWSSHSSHFPRESPHAPTLPADPWDFDHLGPSASSEMPAPPQESTENLVPFLDTWDSAGELPLEPEQFLASQQDLKDKLSPQERLPVSPKKLKKDPAQRWSLAEIIGIIHQLSTPQSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQLPQLLEEEPSSMQQEAPALPPESSMESLTLPNHEVSVQPPGEDQAYYHLPNITVKPADVEVTITSEPTNETESSQAQQETPIQFPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESSREVESSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASPSVSVKPPDVQLTIAAEPSAEVGTSLVHQEATTRLSGSGNDVEPPAIQHGGPPLLPESSEEAGPLAVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSLTHQEAPAQTPEFPNVVVAQPPEHSHLTQATVQPLDLGFTITPESMTEVELSPTMKETPTQPPKKVVPQLRVYQGVTNPTPGQDQAQHPVSPSVTVQLLDLGLTITPEPTTEVGHSTPPKRTIVSPKHPEVTLPHPDQVQTQHSHLTRATVQPLDLGFTITPKSMTEVEPSTALMTTAPPPGHPEVTLPPSDKGQAQHSHLTQATVQPLDLELTITTKPTTEVKPSPTTEETSTQLPDLGLAIIPEPTTETGHSTALEKTTAPRPDRVQTLHRSLTEVTGPPTELEPAQDSLVQSESYTQNKALTAPEEHKASTSTNICELCTCGDEMLSCIDLNPEQRLRQVPVPEPNTHNGTFTILNFQGNYISYIDGNVWKAYSWTEKLILRENNLTELHKDSFEGLLSLQYLDLSCNKIQSIERHTFEPLPFLKFINLSCNVITELSFGTFQAWHGMQFLHKLILNHNPLTTVEDPYLFKLPALKYLDMGTTLVPLTTLKNILMMTVELEKLIVPSHMACCLCQFKNSIEAVCKTVKLHCNSACLTNTTHCPEEASVGNPEGAFMKVLQARKNYTSTELIIEPEEPSDSSGINLSGFGSEQLDTNDESDVTSTLSYILPYFSAVNLDVKSLLLPFIKLPTTGNSLAKIQTVGKNRQRLNRVLMGPRSIQKRHFKEVGRQSIRREQGAQASVENTAEEKRLGSPAPRELKQPHTQQGPEKLAGNAVYTKPSFTQEHKAAVSVLKPFSKGAPSTSSPAKALPQVRDRWKDLTHAISILESAKARVTNMKTSKPIVHSRKKYRFHKTRSRMTHRTPKVKKSPKVRKKSYLSRLMLSNRLPFSAAKSLINSPSQGAFSSLRDLSPQENPFLEVSAPSEHFIENNNTKDTTARNAFEENVFMENTNMPEGTISENTNYNHPPEADSAGTAFNLGPTVKQTETKWEYNNVGTDLSPEPKSFNYPLLSSPGDQFEIQLTQQLQSVIPNNNVRRLIAHVIRTLKMDCSGAHVQVTCAKLVSRTGHLMKLLSGQQEVKASKIEWDTDQWKTENYINESTEAQSEQKEKSLEFTKELPGYGYTKKLILALIVTGILTILIILLCLIEICCHRRSLQEDEEGFSRDSEAPTEEESEALP", "length": 1634 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "O80489-1", "protein_name": "small monomeric GTPase", "gene_name": "SARA1A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MFLFDWFYGILASLGLCKKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKINFKAFDLGGHQIARRVWKDCYAKVDAVVYLVDAYDRDRFVESKRELDALLSDEALANVPCLILGNKIDIPYASSEDELRYYLGLTNFTTGKGIVNLEDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYIK", "length": 193 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80614-1", "protein_name": "RING-type E3 ubiquitin transferase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSDMRDERFFYHRYLSVTNRTTPTTATNLPTSTSNMRSTSLMTPRVAHTSMSSGGDFPDDRFFHARHQSATDRAASNRSRAIMPISTTNVPSSTSNSPRVLQTSMSRRGTSPMSSSTRRSVQASMSARETVPSSTSTRSMQTSTSTPEIMPTSSRNVITSSEEVANTFTQTSYIQFGSLWETNTTPSTRSWPTVPSSNSPRVLQTSMSRRGTSPMSSSTRRNVQSSMSGRETVSSSTSTSSMQTSMSTPEIMPTSSRNVITRSEEVANTFSTQTPYIQFGRLWETNTTSSTRSRTTVPTSTTNVPSSNSSRVLQTSMSTRGTFPMSSSTRMSVQASMLAPGTVSSSMSTVEIMPTSARNMITMSEEVANSFTQTSYIQFGSLWETFKTVTKLSRVAMVENGECVICLEEWRKETYVTSSTSNMRTSSLMTLTRFIDEQISLRATVSSTRTTARLLTNESPATIRAVAMLPRVAMVEKGECVICFEEWSKSDMETELPCKHKYHLECVEKWLKIHTSCPQCRYKLSCVYKSFLML", "length": 535 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81153-1", "protein_name": "Proteasome subunit beta type-3-B", "gene_name": "PBC2", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFICTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYVVTPKEVKERILKGRMD", "length": 204 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P00757-1", "protein_name": "Kallikrein 1-related peptidase-like b4", "gene_name": "Klk1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYNDKYQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLICDGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMANNP", "length": 256 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P01241-1", "protein_name": "Somatotropin", "gene_name": "GH1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFEEAYIPKEQKYSFLQNPQTSLCFSESIPTPSNREETQQKSNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P02762-1", "protein_name": "Major urinary protein 6", "gene_name": "Mup6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04071-1", "protein_name": "Kallikrein 1-related peptidase b16", "gene_name": "Klk1b16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSRIVGGFKCEKNSQPWQVAVYYHKEHICGGVLLDRNWVLTAAHCYVDECEVWLGKNQLFQEEPSAQNRLVSKSFPHPGFNMTLLTFEKLPPGADFSNDLMLLRLSKPADITDVVKPIDLPTKEPKLDSTCLVSGWGSITPTKWQKPDDLQCMFTKLLPNENCAKAYLLKVTDVMLCTIEMGEDKGPCVGDSGGPLICDGVLQGTVSIGPDPCGIPGVSAIYTNLVKFNSWIKDTMMKNA", "length": 261 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04644-1", "protein_name": "Small ribosomal subunit protein eS17", "gene_name": "Rps17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKNLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTVGMNFKTPRGAV", "length": 135 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P05817-1", "protein_name": "Prestalk D11 protein", "gene_name": "ampA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKLILLLILSSCLVLSVKSEVNVDCSLVRCAQPICKPHYRLNMTDSCCGRCEPCTDVACTLQVKYCQDGEVPTGCCPCTLPPTKPDCSLVKCARPVCKPYYRLNMTDSCCGRCEPCTGVACTLQIKYCKDGEVPTGCCPCTPQPTKKPDCSKVPCPKILKYCQEGELPTGCCPCTPQPTKKPDCSRVPCPKILKYCKEGELPTGCCPCTPQPTKKPDCSDVMCTMDIRYCKNGELPTGCCPCTPQETKVPDCSKAMCTMDIKYCKPGEKPFGCCPCRENLTQ", "length": 284 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P06325-1", "protein_name": "T-cell receptor gamma chain V region 5/10-13", "gene_name": "Tcrg-V1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLLRWPTFCCLWVFGLGQLEQTELSVTRATDESAQISCIVSLPYFSNTAIHWYRQKAKKFEYLIYVSTNYNQRPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVCRSGTSWVKIFAKGTKLVVIPP", "length": 135 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P06349-1", "protein_name": "Histone H1t", "gene_name": "H1-6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSETAPAASSTLVPAPVEKPATKRRGKKPGMATARKPRGFSVSKLIPEALSMSQERAGMSLAALKKALAAAGYDVEKNNSRIKLALKRLVNKGVLVQTKGTGASGSFKLSKKAASGNDKGKGKKSASAKAKKLGLSRASRSPKSSKTKVVKKPKATPTKGSGSRRKTKGAKGLQQRKSPAKARATNSNSGKSKMVMQKTDLRKAAGRK", "length": 208 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P07628-1", "protein_name": "Kallikrein 1-related peptidase b8", "gene_name": "Klk1b8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRFLILFLALSLGGIDAAPPLQSRVVGGFNCEKNSQPWQVAVYDNKEHICGGVLLERNWVLTAAHCYVDQYEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLTLKEIPPGADFSNDLMLLRLSKPADITDAVKPITLPTKESKLGSTCLASGWGSITPTKWQKPDDLQCVFLKLLPIKNCIENHNVKVTDVMLCAGEMSGGKNICKGDSGGPLICDSVLQGITSTGPIPCGKPGVPAMYTNLIKFNSWIKDTMTKNS", "length": 261 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P07647-1", "protein_name": "Submandibular glandular kallikrein-9", "gene_name": "Klk9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWFLILFLALSLGQIDAAPPGQSRVVGGYNCETNSQPWQVAVIGTTFCGGVLIDPSWVITAAHCYSKNYRVLLGRNNLVKDEPFAQRRLVSQSFQHPDYIPVFMRNHTRQRAYDHNNDLMLLHLSKPADITGGVKVIDLPTEEPKVGSICLASGWGMTNPSEMKLSHDLQCVNIHLLSNEKCIETYKNIETDVTLCAGEMDGGKDTCTGDSGGPLICDGVLQGLTSGGATPCAKPKTPAIYAKLIKFTSWIKKVMKENP", "length": 259 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P08932-1", "protein_name": "T-kininogen 2", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKLITILLLCSRLLPSLAQEEGAQEMDCNDETVFQAVDTALKKYNAELESGNQFLLYRVTEGTKKDGAETLYSFKYQIKEGNCSVQSGLTWQDCDFKDAEEAATGECTTTLGKKENKFSVATQICNITPGKGPKKTEEDLCVGCFQPIPMDSSDLKPVLKHAVEHFNNNTKHTHLFALTEVKSAHSQVVAGMNYKIIYSIVQTNCSKEDFPFLREDCVPLPYGDHGECRGHTYVDIHNTIAGFSQSCDLYPGDDLFSLLPKKCFGCPKNIPVDSPELKEALGHSIAQLNAQHNHLFYFKIDTVKKATSQVVAGTKYVIEFIARETNCSKQTNTELTADCETKHLGQSLNCNANVYMRPWENKVVPTVRCQALDMMISRPPGFSPFRLVQVQETKEGTTRLLNSCEYKGRLSKAGAGPAPDHQAEASTVTP", "length": 430 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C0S7-1", "protein_name": "Histone H2A.Z", "gene_name": "H2az1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKTV", "length": 128 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C2B7-1", "protein_name": "Large ribosomal subunit protein mL52", "gene_name": "MRPL52", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAALGMLLSTGVRRLHCGSAARAGSQWRLRQGLAANPSGYGPLTELPDWSYADGRPAPPMKGQLRRKAQREKFARRVVLLSQEMDAGLQAWQLRQQEKLQEEKRKQQNALKPKGVLLQNPGPSQ", "length": 124 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P0C644-1", "protein_name": "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1", "gene_name": "Ppip5k1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWSLTANEDEDESATAHFFLGAGDEGLGTCGIGMRTGESDSELLEDEEDEVPPEPQIIVGICAMTKKSKSKPMTQILERLCRFDYLTVVILGEDVILNEPVENWPPCHCLISFHSKGFPLDKAVAYSKLRNPFLINDLTMQYYIQDRREVYRILQEEGIDLPRYAVLNRDPACPEECNLIEGEDQVEVNGAVFPKPFVEKPVSAEDHNVYIYYPSSAGGGSQRLFRKIGSRSSVYSPESSVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVMLTAMEKLVARKVCVAFKQTVCGFDLLRANGHSFVCDVNGFSFVKNSMKYYDDCAKILGNTIMRELAPQFQIPWSIPTEAEDIPIVPTTSGTMMELRCVIAIIRHGDRTPKQKMKMEVTHPRFFALFEKHGGYKTGKLKLKRPEQLQEVLDITRLLLAELEKEPGAEIEEKTGKLEQLKSVLEMYGHFSGINRKVQLTYYPHGVKASSEGQDLQREPPAPSLLLVLKWGGELTPDGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQHRVKARLHHILQQDAPFGPEDYDQLAPTGSTSLLNSMSVIQNPVKVCDQVFALIENLTHQIRERMQDPSSVDLQLYHSETLELMLQRWSKLERDFRQKSGRYDISKIPDIYDCVKYDVQHNGSLGLQGTAELLRLSKALADVVIPQEYGISREEKVEIAVGFCLPLLRKILLDLQRTHEDESVNKLHPLYSRGVLSPGRHVRTRLYFTSESHVHSLLSVFRYGGLLDETKDAQWQRALAYLSAISELNYMTQIVIMLYEDNTRDPLSEERFHVELHFSPGVKGVEEGSAPAGCGFRPASSENEEMKTDPGSIENLCPAKPSDEPDRALQTSPQPVEGTGLPRRSPLIRNRKAGSMEVLSETSSSRPGGYRLFSSSRPPTEMKQSGLGSQCTGLFSTTVLGGSSSAPNLQDYARTHGKKLPPAGLKHRDELLFVPAVKRFSVSFAKHPTNGFEGCSMVPTIYPLETLHNALSLRQVSEFLTKVCQRHTDAHAQASAALFDSMHNHQASDNPFSPPRTLHSPPLQLRHRSEKPPWYSSGPSSTVSSAGPSSPTTVDGNSHFGFSDQSSVNTQMIEEKQGLGLLQETPGDGTPEFHIELAESTQSPQEPPVEISPPGSQDDTEVNQTCQEVPDTIQPCHDILEEIGQPNQEVPDISQLLLKNHDTATNTCQPCQASQLSKKVYEEICQLCQDNPEESNQLCQEVSVELGRMVHRFPVSIGSTTQETLMEIGRPTQEIPEEPCQEFSEKVGMLTQKASAISELSQDILETDNPSQELSEETDLQAQEVSEEIDQEPEVVDELSNEDIS", "length": 1434 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C7H9-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 7", "gene_name": "USP17L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLGGDWQFNHFSKLTSSRLDAAFAEIQRTSLSEKSPLSSETRFDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQKIGNTFYVNVSLQCLTYTLPLSNYMLSREDSQTCHLHKCCMFCTMQAHITWALHSPGHVIQPSQVLAAGFHRGEQEDAHEFLMFTVDAMKKACLPGHKQLDHHSKDTTLIHQIFGAYWRSQIKYLHCHGVSDTFDPYLDIALDIQAAQSVKQALEQLVKPKELNGENAYHCGLCLQKAPASKTLTLPTSAKVLILVLKRFSDVTGNKLAKNVQYPKCRDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATQESTLDHWKFPQEQNKTKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSTKPTDQESMNTGTLASLQGSTRRSKGNNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0CW02-1", "protein_name": "Lymphocyte antigen 6C1", "gene_name": "Ly6c1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTSHTTKSCVLILLVALLCAERAQGLQCYECYGVPIETSCPAVTCRASDGFCIAQNIELIEDSQRRKLKTRQCLSFCPAGVPIRDPNIRERTSCCSEDLCNAAVPTAGSTWTMAGVLLFSLSSVVLQTLL", "length": 131 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DKL4-1", "protein_name": "Spliceosome-associated protein 130 A", "gene_name": "SAP130A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DKL6-1", "protein_name": "Spliceosome-associated protein 130 B", "gene_name": "SAP130B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DML3-1", "protein_name": "Chorionic somatomammotropin hormone 2", "gene_name": "CSH2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEETYIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLRSMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DMV2-1", "protein_name": "Cancer/testis antigen family 45 member A9", "gene_name": "CT45A9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETAFSPKSQQEINADIKRQLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DOV1-1", "protein_name": "Interferon-activable protein 211", "gene_name": "Ifi211", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLRGLECINKHYFSLFKSLLARDLNLERDNQEQYTTIQIANMMEEKFPADSGLGKLIEFCEEVPALRKRAEILKKERSEVTGETSLEKNGQEAGPATPTSTTSHMLASERGETSATQEETSTAQAGTSTAQAGTSTAQAGTSTAQKRKSMREEETGVKKSKAAKEPDQPPCCEEPTAMCQSPILHSSSSASSNILSAKNQKSQPQNQNIPRGAVLHSEPLTVMVLTATDPFEYESPEHEVKNMFHATVATVSQYFHVKVFNIDLKEKFTKNNFITISNYFESKGILEINETSSVLEAAPKQMIEVPNCITRNANASPKICDIQKGTSGTVFYGVFTLHKKKVKTQNTSYEIKDGSGSIEVVGSGQWHNINCKEGDKLHLFCFHLKRERGQPKLVCGDHSFVKVTKAGKKKEASTVQ", "length": 425 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DTA3-1", "protein_name": "Speedy protein E11", "gene_name": "SPDYE11", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVSGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD3-1", "protein_name": "Speedy protein E14", "gene_name": "SPDYE14", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD4-1", "protein_name": "Speedy protein E15", "gene_name": "SPDYE15", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW11-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 6", "gene_name": "TAF11L6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW12-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 7", "gene_name": "TAF11L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW13-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 8", "gene_name": "TAF11L8", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW14-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 10", "gene_name": "TAF11L10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P11588-1", "protein_name": "Major urinary protein 1", "gene_name": "Mup1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEKHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P11589-1", "protein_name": "Major urinary protein 2", "gene_name": "Mup2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLEKSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAKLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P13255-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "Gnmt", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVDSVYRTRSLGVAAEGIPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILSTGCAPPGKNIYYKSDLTKDITTSVLTVNNKAHMVTLDYTVQVPGAGRDGAPGFSKFRLSYYPHCLASFTELVQEAFGGRCQHSVLGDFKPYRPGQAYVPCYFIHVLKKTG", "length": 293 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P13675-1", "protein_name": "Y-linked testis-specific protein 1", "gene_name": "Ssty1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVSCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYFVKYDGIDSIYVLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFERKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P15515-1", "protein_name": "Histatin-1", "gene_name": "HTN1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKFFVFALVLALMISMISADSHEKRHHGYRRKFHEKHHSHREFPFYGDYGSNYLYDN", "length": 57 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P16374-1", "protein_name": "Zinc finger protein 60", "gene_name": "Zfp60", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANSSSQHMVCGSVTFRDVAVDFSQEEWACLDATQKVLYRNIMLETYSNLVAVVGRCIPKPDLIVLLEPEKEPWMAVKKETGRPSQGLETGFEAENRSPKNHVYNKKLPKQTIQQLSKTSDVQGVSVSNGPGYSVIKEPQNYQEGDANRNITNKKEMSTYTSKTLAHNKEKPYKCKDCGKCFGCKSNLHQHESIHTGEKPYECKDCGKTFRLPQMLSRHQKSHSDERPFECNICGKSFHLPTLLQYHKNIHTGLKPFECEECGKSFKSFNRISTLFQHRTIHAGMKPYKCNVCGKAFNRRSNLLQHQKIHSEDRPFHCKVCGKAFTVLAQLTRHENIHTEDKSFECKQCGKIFSNGSYLLRHYDTHTNEKPFECNICGKAFRLHLYLSEHQKTHTDEKPFKCKLCESAFRRKYQLSEHQRIHTDGKPYQCKDCWEFFRRRSNFIEHQSIHTGKKPFECKDCGKVFRLNIHLIRHQRFHSDEKPFECKECGKAFHFSSQLNNHKTSHTGQTPFECKECGKSFKRVSSLVEHRIIHSGVKPYKCNACGRAFNRRSNLMQHEKIHSDERPFECKDCGKAFTVLAQLTRHQTIHNGKKSYECEQCGSAFRLPYQLTQHQRIHYDVKPFQCKECGRAFVRSTGLRIHERIHTGEKPFQCKECGEAFQYHYQFLGHFRIHTGKNPYECSECGKYFTYGRDLKVHQSIHNLEKP", "length": 707 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P20816-1", "protein_name": "Cytochrome P450 4A2", "gene_name": "Cyp4a2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGFSVFSPTRSLDGVSGFFQGAFLLSLFLVLFKAVQFYLRRQWLLKALEKFPSTPSHWLWGHNLKDREFQQVLTWVEKFPGACLQWLSGSTARVLLYDPDYVKVVLGRSDPKPYQSLAPWIGYGLLLLNGKKWFQHRRMLTPAFHYDILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIFHYVSLMTLDTVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNLIFFRVRSAFYGNSIIYNMSSDGRLSRRACQIAHEHTDGVIKTRKAQLQNEEELQKARKKRHLDFLDILLFAKMEDGKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGDGTSVTWDHLDQMPYTTMCIKEALRLYSPVPSVSRELSSPVTFPDGRSIPKGIRVTILIYGLHHNPSYWPNPKVFDPSRFSPDSPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPVPMPRLVLKSKNGIHLRLKKLR", "length": 504 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P21571-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "Atp5pf", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQRIFRLSSVLRSAVSVHLRRNIGVTAVAFNKELDPVQKLFLDKIREYKAKRLASGGPVDTGPEYQQEVDRELFKLKQMYGKGEMDKFPTFNFEDPKFEVLDKPQS", "length": 108 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P22237-1", "protein_name": "NADH-ubiquinone oxidoreductase subunit 9", "gene_name": "nad9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKDYKNELKVKINLGEHLRLSIPGLVKKIMYKTHYLEIQVEKEKMLTVLKYLKEASKYQCNMLLDIVCVDCLNIEEIKIGRFKLIYVLNSIYNNTRVHLSTYVENNGIIETTSGLFESSVWLEREIWDMFGIYFEKHPDLRRILTDYGFVGYPLKKDFPITGYLEVYYDVNDKKIIYKPIELMQEYRNYNFGAVWGDYERKVYLENIIK", "length": 209 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P22283-1", "protein_name": "Cystatin-related protein 2", "gene_name": "Crp2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYKTLCGTQLLLAIFVLFLNFSHATAKGTRGPMEIFKKNFMEKNKLNDVYDIFKFLYNKFSHDTYLSNIKNQSFTMNTWGFGEIEVVKTKCRKIDSDFYKCSFQWEFCNIKRTPGVTIYYITLPGSVRCRKLLSKLVNCPFEEQTEQLKREICYFQLYPDYIEQNIRSVRFNCYTK", "length": 176 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P23266-1", "protein_name": "Olfactory receptor 1f45", "gene_name": "Or1f45", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILAIGTDSRLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILGSQAISFSGCLTQLYFLAVFGNMDNFLLAVMSYDRFVAICHPLHYTTKMTRQLCVLLVVGSWVVANMNCLLHILLMARLSFCADNMIPHFFCDGTPLLKLSCSDTHLNELMILTEGAVVMVTPFVCILISYIHITCAVLRVSSPRGGWKSFSTCGSHLAVVCLFYGTVIAVYFNPSSSHLAGRDMAAAVMYAVVTPMLNPFIYSLRNSDMKAALRKVLAMRFPSKQ", "length": 313 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24049-1", "protein_name": "Large ribosomal subunit protein uL22", "gene_name": "Rpl17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKKISQKKLKKQKLMARE", "length": 184 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24868-1", "protein_name": "G2/mitotic-specific cyclin-1", "gene_name": "CLB1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSRSLLVENSRTINSNEEKGVNESQYILQKRNVPRTILGNVTNNANILQEISMNRKIGMKNFSKLNNFFPLKDDVSRADDFTSSFNDSRQGVKQEVLNNKENIPEYGYSEQEKQQCSNDDSFHTNSTALSCNRLIYSENKSISTQMEWQKKIMREDSKKKRPISTLVEQDDQKKFKLHELTTEEEVLEEYEWDDLDEEDCDDPLMVSEEVNDIFDYLHHLEIITLPNKANLYKHKNIKQNRDILVNWIIKIHNKFGLLPETLYLAINIMDRFLCEEVVQLNRLQLVGTSCLFIASKYEEIYSPSIKHFAYETDGACSVEDIKEGERFILEKLDFQISFANPMNFLRRISKADDYDIQSRTLAKFLMEISIVDFKFIGILPSLCASAAMFLSRKMLGKGTWDGNLIHYSGGYTKAKLYPVCQLLMDYLVGSTIHDEFLKKYQSRRFLKASIISIEWALKVRKNGYDIMTLHE", "length": 471 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P25389-1", "protein_name": "Probable serine/threonine-protein kinase KCC4", "gene_name": "KCC4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTVANTETHSAAKPSSTIGPWKLGETLGFGSTGKVQLAQHERTGHRTAVKVISKSIFNNNGNHSNDDSVLPYNIEREIVIMKLLSHPNVLSLYDVWETNNNLYLILEYAEKGELFNLLVDHGPLPEREAINCFRQIIIGISYCHALGIVHRDLKPENLLLDSFYNIKIADFGMAALQTDADLLETSCGSPHYAAPEIVSGLPYEGFASDVWSCGVILFALLTGRLPFDEENGNVRDLLLKVQKGQFEMPNDTEISRDAQDLIGKILVVDPRQRIKIRDILSHPLLKKYQTIKDSKSIKDLPRENTYLYPLADSNNHTSASIDDSILQNLVVLWHGRHADDIVSKLKENGTNKEKILYALLYRFKLDSVRGSNKKNRNKIKKTKKNKRSSTLSSSSSLLLNNRSIQSTPRRRTSKRHSREFSSSRKRSSFLLSSNPTDSSPIPLRSSKRITHINVASANTQATPSGVPNPHKRNSKKRSSKRLSYMPNTKRSSLTSKSLSNFTNLIDDDDWEYIEKDAKRTSSNFATLIDEIFEPEKFELAKREKAELQRKVQEAKRQSVNAQKINEDEFGSEVSDGMKELKKINDKVSSPLINYEFSQQELLQDIDTLLTNRYQLSSYTRPISRLDPGLTPVTETLPNNLKEKTALLQDTEKKIIETIRRSKFLGSLLNVRGGLSPGKSELAPIEESPIVSTTPLIYNDRMEPRRISDVEVPHFTRKSKHFTTANNRRSVLSLYAKDSIKDLNEFLIKEDPDLPPQGSTDNESRSEDPEIAESITDSRNIQYDEDDSKDGDNVNNDNILSDFPQGVGISQEYDMKDKNPNQSPISKSAEPTLVVKLPSLSSFQGKNASGLGLYQREPSKVTLPSLTSNNSSVGENIEDGAEKGTESEKIAASLSDDDLKEDNDKKDNDTVNAPTTVKKPPNSVLLKKFSKGKILELEIHAKIPEKRLYEGLHKLLEGWKQYGLKNLVFNITNMIITGKLVNDSILFLRSTLFEIMVLPNGDGRSLIKFNKKTGSTKTLTKLATEIQIILQKEGVLDK", "length": 1037 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P28312-1", "protein_name": "Alpha-defensin 5", "gene_name": "Defa5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHEELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P28742-1", "protein_name": "Kinesin-like protein KIP1", "gene_name": "KIP1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MARSSLPNRRTAQFEANKRRTIAHAPSPSLSNGMHTLTPPTCNNGAATSDSNIHVYVRCRSRNKREIEEKSSVVISTLGPQGKEIILSNGSHQSYSSSKKTYQFDQVFGAESDQETVFNATAKNYIKEMLHGYNCTIFAYGQTGTGKTYTMSGDINILGDVQSTDNLLLGEHAGIIPRVLVDLFKELSSLNKEYSVKISFLELYNENLKDLLSDSEDDDPAVNDPKRQIRIFDNNNNNSSIMVKGMQEIFINSAHEGLNLLMQGSLKRKVAATKCNDLSSRSHTVFTITTNIVEQDSKDHGQNKNFVKIGKLNLVDLAGSENINRSGAENKRAQEAGLINKSLLTLGRVINALVDHSNHIPYRESKLTRLLQDSLGGMTKTCIIATISPAKISMEETASTLEYATRAKSIKNTPQVNQSLSKDTCLKDYIQEIEKLRNDLKNSRNKQGIFITQDQLDLYESNSILIDEQNLKIHNLREQIKKFKENYLNQLDINNLLQSEKEKLIAIIQNFNVDFSNFYSEIQKIHHTNLELMNEVIQQRDFSLENSQKQYNTNQNMQLKISQQVLQTLNTLQGSLNNYNSKCSEVIKGVTEELTRNVNTHKAKHDSTLKSLLNITTNLLMNQMNELVRSISTSLEIFQSDSTSHYRKDLNEIYQSHQQFLKNLQNDIKSCLDSIGSSILTSINEISQNCTTNLNSMNVLIENQQSGSSKLIKEQDLEIKKLKNDLINERRISNQFNQQLAEMKRYFQDHVSRTRSEFHDELNKCIDNLKDKQSKLDQDIWQKTASIFNETDIVVNKIHSDSIASLAHNAENTLKTVSQNNESFTNDLISLSRGMNMDISSKLRSLPINEFLNKISQTICETCGDDNTIASNPVLTSIKKFQNIICSDIALTNEKIMSLIDEIQSQIETISNENNINLIAINENFNSLCNFILTDYDENIMQISKTQDEVLSEHCEKLQSLKILGMDIFTAHSIEKPLHEHTRPEASVIKALPLLDYPKQFQIYRDAENKSKDDTSNSRTCIPNLSTNENFPLSQFSPKTPVPVPDQPLPKVLIPKSINSAKSNRSKTLPNTEGTGRESQNNLKRRFTTEPILKGEETENNDILQNKKLHQ", "length": 1111 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P29314-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPVARSWVCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED", "length": 194 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P33579-1", "protein_name": "Prolactin-8A5", "gene_name": "Prl8a5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELALSQPSFFGTLLMLVVSNLLLWEKAASIPACMVEDGGCWDPLREAFNSATQRAETLRNLSDQLYVEFFQNQFSSRQFADLSSQLIRKDETVLKAGTYCHSNRAKPKSRGVNIDIEEYLKMSINFCGFMDQPLFHLVIELSAMEGVPETILSKAKDLEENNRQLLDDLRWILTKVFPTAEIKEEFPSWDYLSFLKSSNKNHKFLAIFNLSSCLDYDTQVHYTLSQILNCLITGKDC", "length": 238 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P36006-1", "protein_name": "Myosin-3", "gene_name": "MYO3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MAVIKKGARRKDVKEPKKRSAKIKKATFDANKKKEVGISDLTLLSKISDESINENLKKRFKNGIIYTYIGHVLISVNPFRDLGIYTNAVLESYKGKNRLEVPPHVFAIAESMYYNLKSYNENQCVIISGESGAGKTEAAKRIMQYIAAASNSHSESIGKIKDMVLATNPLLESFGCAKTLRNNNSSRHGKYLEIKFNSQFEPCAGNITNYLLEKQRVVGQIKNERNFHIFYQFTKGASDTYKQMFGVQMPEQYIYTAAAGCTTADTIDDVKDYEGTLEAMRTIGLVQEEQDQIFRMLAAILWIGNISFIENEEGNAQVGDTSVTDFVAYLLQVDASLLVKCLVERIMQTSHGMKRGSVYHVPLNPVQATAVRDALAKAIYNNLFDWIVDRVNVSLQAFPGADKSIGILDIYGFEIFEHNSFEQICINYVNEKLQQIFIQLTLKAEQETYEREKIKWTPIKYFDNKVVCDLIEAKNPPGILAAMNDSIATAHADSNAADQAFAQRLNLFNSNPYFELRANKFVIKHYAGDVTYDINGITDKNKDQLQKDLIELIGTTTNTFLSTIFPDDVDKDSKRRPPTAGDKIIKSANELVETLSKAEPSYIRTIKPNQTKSPNDYDDHQVLHQVKYLGLQENVRIRRAGFAYRQTFEKFVERFYLLSPDCSYAGDYTWDGDTLEAVKLILRDAMIPEKEFQLGVTSVFIKTPESLFALEDMRDKYWYNMAARIQRAWRRFLQRRIDAAIKIQRTIREKKGGNKYVKLRDYGTKLLAGKKERRSMSLLGYRAFMGDYLSCNESKTKGSYIRRQVGIKDKVVFSIKGECLHSKFGRSAQRLKKVFILTKKTFYIIGQTREQNAMKYTQDYKIDVGKIKQVSLTNLQDDWMGVILVNSTQSDPLINTPFKTELMTRLKKLNEKIMIKVGPTIEYHKQPNKLHTVRSKISDSAPKYGDIYKSSTIYVRRGHPANSKSNKKPKNPGGLSGKPIKSKKSKHKSTHKHTHSHRSHRDAAKKQPLPSQKPVNPLSLAATAAQAAYNPKPDKTVPIKSSAIPAAKVSSKHSSKPSSKEKVAVKKASSSHKSSSAKQNQVSMPPSKGVEKNKEPLKETTATATANIPIPPPPPPMGQPKDPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKDTRNTVPVAATGAVNDVTNQKSSQIDNTISSAQEGVQFGSATVGPTSDNQSNPVGTFSDGLASALAARANKMRAESADDDDNDDGDDDDDW", "length": 1272 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P36046-1", "protein_name": "Mitochondrial intermembrane space import and assembly protein 40", "gene_name": "MIA40", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MLRNLVVRNACRNRPSIQVARGLCRHQTRRLMASSPQFGRNSNQEKTAGFIMGILSMAGALYFIAPNRKPLFASRKVESDKTAEEELSSGGEQSPENEDDNNSKSDENGDDNDSKNDETEAGPQLGGDKIGASKVAEDGELVVLAEEDNKSSEDKDTDESKVSTKDDEQSNEDNATANNQKDENISSENSEENTSDKTLDNNAGSSEKKDPEHSDDEKSQQGQSDDKTTTEDNNGEEESSKKTVSDSENSAKQSESSDEEKEELRKQEEKQMGPTEEEVQHEGAYNPDTGEINWDCPCLGGMAHGPCGEEFKSAFSCFVYSEAEPKGIDCVEKFQHMQDCFRKYPEHYAEQLKETSDDEEPQDKVKVNTIESAPNVSSAKENAAKKAEQSDVKKEPLNEESKP", "length": 403 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P37106-1", "protein_name": "Signal recognition particle subunit SRP54 1", "gene_name": "SRP-54A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIVNLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFKKEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDWSGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRIPLNQLFSMLPGISAEMMPKGHGEESRVKMKRYMTMMDSMTNKELDSPNPKIFNESRIMRIARGSGRLVREVMEMLEEYKRIAKTMKGIKIPKNGDMSKVIPPQMLKQMGGMSGLQSLMKQMGSAKDMMGMFGGGGK", "length": 479 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P38150-1", "protein_name": "Inactive deaminase YBR284W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MVQNNESVFFVECDSYKESPSTSPIRLDDLDGNDAVSDQGLAFDGDVGITSQARVRNPRAQIFEDSNTDVVLHLDDLDMVPLNTKFDMQMEMGSPMAMPAETPPPVEPLKTKDLAYSSLAHLPSYFFEQTHFRIDRKCLLEMSKLRRNYLTISKQDALSCPQLHSRVAGGYLKPVKEKLFGIRHFLDLEESNTVNLLQDGNYMTELFNSQINIPTFKEFREDFEWCLKIIRDRSLSRFSEKRLQYLVNKFPVFQHLHSKEEMRQSKKVPHKDFYNCRKIDLNLLLSGCFSQWQLTEFIWTKLRKEPDRVIHQAFNGSHITLSQLFKVNFEETGQFFNGLKIIDDSFLEWYKVIYLAKYHLVNDEMEIHTGSHGKQLRYYLIAKTFLEFDNYINGEYLAELLKTFLIKPQEESKYQLCQLSVDFQFYLHYDNSDVDNWWMVFANWLNHYNIFSNNIRWNIRISRIYPELYHTGKVKNFQEYLNLIFKPLFNAENYLHKSLGPILLKFLSQVSSIDLCIQDTDNYIWKNFTAVSCLPKDWTSGGDNPTISQYMYYVYVNLTKLNHIRQALHQNTFTLRSSCSPTSMNRTSQFSNTLNFTEHTEAILNNFLLACGGFLNAENLWNAPPSLVYLFYLSQIPMVVAPLNSIVDSKPTMLQEQAPTGLVLEPSKPYKKNPFMKFFEMGFKISLSSESILYNNSYTKEPIIEEYSVAASIYRLHSADLCELLRNSVITSGFSSTLKNKWLGVSLASHDYFVENTGFVDKWYDCKPNTSLEHNVPIIRRQYRSSTLAGEWRLIIA", "length": 797 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40002-1", "protein_name": "Transcriptional regulator MIT1", "gene_name": "MIT1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MDIEPTFKGYIEDEDDALLILQATLDGKLKHIPRRPYEIERPYLIVSGSIFVFIEEISGIKRWTDGVSWSPSRISGKFLIYKELDKENAGSNANATSSGSTDSAVITDGTSGARNNPSSSKIKLPPLKNHQFDLPPTMGHSSFESEQDTSISPSNRSNLPLKYTGLVKKTISVKLKRPPFNSIENLHIVSYYSVKDIKQNCLVTPKASPFLKDVRPSQELIVAMGNTTLGNVKNNSTTTGNGPNNINNKSNSSTPLNTVISTNNNSANINAAGSNQFTSANKNYYYKNDESSGYPITQFAPALPSTTLMYTANPPYITQSPDNTNATGMNTHVNNNNNNSNNSSNSNNSNNNNNNNNNNNNNNNNNINNINNVNTNAGNGNNPNRFHNASFAYNTTGDFINPQQQGQISYPFYYTTIPINNPNYYTTQPPNPVTNASTNENQGYSTSSTQHPYYGHPTESQSASAAAGATGTPGTAENVLPVSSMQPLLHQANNNSASSATSTAPYPVYSMNVNVPYYNSSASAYKRAQENTTSNTNAEPSGATSTNSGTMLSNPAYANSQYTPSQVYYQGFPQYAMASAQNPSMYQHQHQHPLPTVYPIATPQQNIMSSGHTLSTIGSDPQHHHYQQEPNDHKNFAMGHANNNILNITNNDTMNNLNTNTSTTTQ", "length": 666 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P42222-1", "protein_name": "Enolase-related protein 3", "gene_name": "ERR3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSITKVHARTVYDSRGNPTVEVEITTENGLFRAIVPSGASTGIHEAVELRDGNKSEWMGKGVTKAVSNVNSIIGPALIKSDLCVTNQKGIDELMISLDGTSNKSRLGANAILGVSLCVARAAAAQKGITLYKYIAELADARQDPFVIPVPFFNVLNGGAHAGGSLAMQEFKIAPVGAQSFAEAMRMGSEVYHHLKILAKEQYGPSAGNVGDEGGVAPDIDTAEDALDMIVKAINICGYEGRVKVGIDSAPSVFYKDGKYDLNFKEPNSDPSHWLSPAQLAEYYHSLLKKYPIISLEDPYAEDDWSSWSAFLKTVNVQIIADDLTCTNKTRIARAIEEKCANTLLLKLNQIGTLTESIEAANQAFDAGWGVMISHRSGETEDPFIADLVVGLRCGQIKSGALSRSERLAKYNELLRIEEELGDDCIYAGHRFHDGNKL", "length": 437 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P43356-1", "protein_name": "Melanoma-associated antigen 2", "gene_name": "MAGEA2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQQTASSSSTLVEVTLGEVPAADSPSPPHSPQGASSFSTTINYTLWRQSDEGSSNQEEEGPRMFPDLESEFQAAISRKMVELVHFLLLKYRAREPVTKAEMLESVLRNCQDFFPVIFSKASEYLQLVFGIEVVEVVPISHLYILVTCLGLSYDGLLGDNQVMPKTGLLIIVLAIIAIEGDCAPEEKIWEELSMLEVFEGREDSVFAHPRKLLMQDLVQENYLEYRQVPGSDPACYEFLWGPRALIETSYVKVLHHTLKIGGEPHISYPPLHERALREGEE", "length": 314 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43357-1", "protein_name": "Melanoma-associated antigen 3", "gene_name": "MAGEA3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQEAASSSSTLVEVTLGEVPAAESPDPPQSPQGASSLPTTMNYPLWSQSYEDSSNQEEEGPSTFPDLESEFQAALSRKVAELVHFLLLKYRAREPVTKAEMLGSVVGNWQYFFPVIFSKASSSLQLVFGIELMEVDPIGHLYIFATCLGLSYDGLLGDNQIMPKAGLLIIVLAIIAREGDCAPEEKIWEELSVLEVFEGREDSILGDPKKLLTQHFVQENYLEYRQVPGSDPACYEFLWGPRALVETSYVKVLHHMVKISGGPHISYPPLHEWVLREGEE", "length": 314 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43537-1", "protein_name": "Uncharacterized membrane protein YFL067W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MESIILSIAIFIGVLLGTSVGAGSGSSISPDVDAGSGSRTSPDVDAGSGSRISAGVGTFSGSSTSPDVDAGSGSSTSPDVGAGSGSSISAGVGSRIGTGIGSRIGTGIGTGIGSRISTSIGSRISPDVGTSSGNRISTGVSTGISTTMNARVAVLITAAILSAPVTAIALLEARR", "length": 175 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P46162-1", "protein_name": "Beta-defensin 4", "gene_name": "DEFB4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLAVLFLVLSAGSGFTQRVRNPQSCRWNMGVCIPFLCRVGMRQIGTCFGPRVPCCRR", "length": 63 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P46169-1", "protein_name": "Beta-defensin 11", "gene_name": "DEFB11", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLALLFLVLSAGSGISGPLSCRRNGGVCIPIRCPGPMRQIGTCFGRPVKCCRSW", "length": 60 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P47102-1", "protein_name": "ARF guanine-nucleotide exchange factor 1", "gene_name": "GEA1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MHDVPMETVLAVNPATMIVKECINLCSAMNKQSRDKSQTSVAALLGGGSDIFLSQSDSFVDSFHNLPTSSYHDPLISGLVQLRLKINDLKGLDSLNALELLKPFLEIVSASSVSGYTTSLALDSLQKVFTLKIINKTFNDIQIAVRETVVALTHCRFEASKQISDDSVLLKVVTLLRDIITSSFGDYLSDTIIYDVLQTTLSLACNTQRSEVLRKTAEVTIAGITVKLFTKLKLLDPPTKTEKYINDESYTDNNLKDDIIGTTTSDNDLSSTDDDSAVADDNKNEKPVQQVIREQENDEETAEKAENVEPNYGITVIKDYLGLLLSLVMPENRMKHTTSAMKLSLQLINAAIEISGDKFPLYPRLFSLISDPIFKSVLFIIQSSTQYSLLQATLQLFTSLVVILGDYLPMQIELTLRRIFEILEDTTISGDVSKQKPPAIRELIIEQLSILWIHSPAFFLQLFVNFDCNLDRSDLSIDFIKELTKFSLPAAAVNTSNNIPPICLEGVLSLIENIYNDLQRFDRAEFVKNQKEIDILKQRDRKTEFILCVETFNEKAKKGIQMLIEKGFIDSDSNRDIASFLFLNNGRLNKKTIGLLLCDPKKTSLLKEFIDLFDFKGLRVDEAIRILLTKFRLPGESQQIERIVEAFSSKYSADQSNDKVELEDKKAGKNGSESMTEDDIIHVQPDADSVFVLSYSIIMLNTDSHNPQVKDHMTFDDYSNNLRGCYNGKDFPRWYLHKIYTSIKVKEIVMPEEHHGNERWFEDAWNNLISSTSVMTEMQRDFTNPISKLAQIDILQYEKAIFSNVRDIILKTLFKIFTVASSDQISLRILDAISKCTFINYYFSFDQSYNDTVLHLGEMTTLAQSSAKAVELDVDSIPLVEIFVEDTGSKISVSNQSIRLGQNFKAQLCTVLYFQIIKEISDPSIVSTRLWNQIVQLILKLFENLLMEPNLPFFTNFHSLLKLPELPLPDPDISIRKAKMSRSLLSTFASYLKGDEEPSEEDIDFSIKAFECVKASHPLSSVFENNQLVSPKMIETLLSSLVIEKTSENSPYFEQELLFLLEISIILISEASYGQEFGALIADHMINISNLDGLSKEAIARLASYKMFLVSRFDNPRDILSDLIEHDFLVKNEIFNTKYYESEWGKQVINDLFTHLNDVKYNERALKNVKFWNFLRILISAKDRQFAVYTFLEKYIQNGDIFVDDGNFMNILSLLDEMSCAGAVGTKWEQNYENSVEDGCEAPESNPYRSIIDLSSRSINITADLLSTVGRSNSALNKNEIIAAIQGLAHQCLNPCDELGMQALQALENILLSRASQLRTEKVAVDNLLETGLLPIFELDEIQDVKMKRITSILSVLSKIFLGQLVEGVTSNETFLRVLNVFNKYVDDPTVERQLQELIISKREIEKE", "length": 1408 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P53563-1", "protein_name": "Bcl-2-like protein 1", "gene_name": "Bcl2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEPERETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK", "length": 233 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P56840-1", "protein_name": "Protein TCL1B1", "gene_name": "Tcl1b1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAAFDPLGPLPVYLVSVRLGIYEDEHHRVWIVANVETSHSSHGNRRRTHVTVHLWKLIPQQVIPFNPLNYDFLPTTWKLESRNIYWATDGTHWRLLDHSQLGDTEQLILMLVLG", "length": 116 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56841-1", "protein_name": "Protein TCL1B2", "gene_name": "Tcl1b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAGFYPPRLLPQVLISTGPGFYEDEHHRLWMVAKLETCSHSPYCNKIETCVTVHLWQMTRYPQEPAPYNPMNYNFLPMTWRLASMNTYRGTDAMHWRLLNHSQVGDTVQLILMLE", "length": 117 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56842-1", "protein_name": "Protein TCL1B3", "gene_name": "Tcl1b3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVHFPWMPFPPRFLVCTRDDIYEDENGRQWVVAKVETSRSPYGSRIETCITVHLQHMTTIPQEPTPQQPINNNSLPTMWRLESMNTYTGTDGTYWRLLDHSQMGDTLQLILDIVICEVD", "length": 122 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56844-1", "protein_name": "Protein TCL1B4", "gene_name": "Tcl1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVRFPCMPFPPCFLVCTRDDIYEDEHGRQWVAAKVETSSHSPYCSKIETCVTVHLWQMTTLFQEPSPDSLKTFNFLPRTWRLESRNTYRGADAMHWRLVNHSQFYGTEELVLMLDSR", "length": 120 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P59528-1", "protein_name": "Taste receptor type 2 member 123", "gene_name": "Tas2r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSQKINYSHLFTFSITLYVEIVTGILGHGFIALVNIMDWVKRRRISSVDQILTALALTRFIYVLSMLICILLFMLCPHLPRRSEMLSAMGIFWVVNSHFSIWLTTCLGVFYFLKIANFSNSFFLYLKWRVKKVILIIILASLIFLTLHILSLGIYDQFSIAAYVGNMSYSLTDLTQFSSTFLFSNSSNVFLITNSSHVFLPINSLFMLIPFTVSLVAFLMLIFSLWKHHKKMQVNAKQPRDVSTMAHIKALQTVFSFLLLYAIYLLFLIIGILNLGLMEKIVILIFDHISGAVFPISHSFVLILGNSKLRQASLSVLPCLRCQSKDMDTMGL", "length": 333 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P61314-1", "protein_name": "Large ribosomal subunit protein eL15", "gene_name": "Rpl15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR", "length": 204 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62246-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "Rps15a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62425-1", "protein_name": "Large ribosomal subunit protein eL8", "gene_name": "Rpl7a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62802-1", "protein_name": "Histone H4", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P62963-1", "protein_name": "Profilin-1", "gene_name": "Pfn1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGWNAYIDSLMADGTCQDAAIVGYKDSPSVWAAVPGKTFVSITPAEVGVLVGKDRSSFFVNGLTLGGQKCSVIRDSLLQDGEFTMDLRTKSTGGAPTFNVTVTMTAKTLVLLMGKEGVHGGLINKKCYEMASHLRRSQY", "length": 140 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62982-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "Rps27a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMGSHFDRHYCGKCCLTYCFNKPEDK", "length": 156 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P70709-1", "protein_name": "Eosinophil cationic protein", "gene_name": "Rnase3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGLKLLESRLCLLLSLGLVLMLASCQPPTPSQWFEIQHIYNRAYPRCNDAMRHRNRFTGHCKDINTFLHTSFASVVGVCGNRNIPCGNRTYRNCHNSRYRVSITFCNLTTPARIYTQCRYQTTRSRKFYTVGCDPRTPRDSPMYPVVPVHLDRIF", "length": 155 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P81278-1", "protein_name": "Prolactin-releasing peptide", "gene_name": "Prlh", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALKTWLLCLLLLSLVLPGASSRAHQHSMETRTPDINPAWYTGRGIRPVGRFGRRRATPRDVTGLGQLSCLPLDGRTKFSQRG", "length": 83 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83883-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "Rpl36a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83884-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "RPL36A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P97876-1", "protein_name": "Basic leucine zipper transcriptional factor ATF-like 3", "gene_name": "Batf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQGPPAGGVLQSSVAAPGNQPQSPKDDDRKVRRREKNRVAAQRSRKKQTQKSDKLHEEHESLEQENSVLRREIAKLKEELRHLTEALKEHEKMCPLLLCPMNFVQLRPDPVASWSAHDAPDHPSFIWLGTLV", "length": 133 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q00729-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2bc1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEVSAKGTTISKKGFKKAVTKTQKKEGRKRKRCRKESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVTDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK", "length": 127 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q01534-1", "protein_name": "Testis-specific Y-encoded protein 1", "gene_name": "TSPY1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESAPEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVGEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS", "length": 308 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q03764-1", "protein_name": "Ethanolamine kinase", "gene_name": "EKI1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MYTNYSLTSSDAMPRTYLVGTASPEMSKKKRQSANCDKPTRRVIHIIDTNEHSEVDLKNELPITCTNEDGEMTSSSWTSQTANDFLKLAYVNAKLDPSLPSQYFKQDIINVLQSLEIPGWSVPGSKESSLNKNLLTLTQIKGALTNVIYKIHYPNLPPLLMRIFGDSIDSVIDREYELKVIARLSFYDLGPKLEGFFENGRFEKYIEGSRTSTQADFIDRDTSIKIAKKLKELHCTVPLTHKEITDQPSCWTTFDQWIKLIDSHKEWVSNNVNISENLRCSSWNFFLKSFKNYKRWLYNDSAFTSKLLREDDKDSMINSGLKMVFCHNDLQHGNLLFKSKGKDDISVGDLTIIDFEYAGPNPVVFDLSNHLNEWMQDYNDVQSFKSHIDKYPKEEDILVFAQSYINHMNENHVKIASQEVRILYNLIIEWRPCTQLFWCLWALLQSGRLPQRPLIEGEKLMSEKAGLGDETHLMEHKNKENGKYDCSEDDSFNYLGFCKEKMSVFWGDLITLGVIDKDCPDIGKTDYLDTKLIF", "length": 534 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q04902-1", "protein_name": "Probable glutathione-independent glyoxalase SNO4", "gene_name": "SNO4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGFGWDEHYLPKSFIGGEDKMNFETKNSAFNKALARIKTANEVNASDYKIFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGLIDIKTTRPLIEGKAITGFPLEGEIALGVDDILRSRKLTTVERVANKNRAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINALYS", "length": 237 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q0D2J5-1", "protein_name": "Zinc finger protein 763", "gene_name": "ZNF763", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDPVACEDVAVNFTQEEWALLDISQRKLYREVMLETFRNLTSIGKKWKDQNIEYEYQNPRRNFRSLIEGNVNEIKEDSHCGETFTQVPDDRLNFQEKKASPEAKSCDNFVCGEVGIGNSSFNMNIRGDIGHKAYEYQDYAPKPYKCQQPKKAFRYHPSFRTQERNHTGEKPYACKECGKTFISHSGIRRRMVMHSGDGPYKCKFCGKAVHCLRLYLIHERTHTGEKPYECKQCVKSFSYSATHRIHERTHTGEKPYECQQCGKAFHSSSSFQAHKRTHTGGKPYECKQCGKSFSWCHSFQIHERTHTGEKPCECSKCNKAFRSYRSYLRHKRSHTGEKPYQCKECRKAFTYPSSLRRHERTHSAKKPYECKQCGKALSYKFSNTPKNALWRKTL", "length": 394 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q0WX57-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 24", "gene_name": "USP17L30", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLRGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q1LYG5-1", "protein_name": "Elongation factor 2a.1", "gene_name": "eef2a.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MENFNVDQIRATMDKKSNIRNMSVIGAFDHGKSTLTDWLVSEAGIVSSARAGETRFMDTRRDEQERCITIKSTAISIFYELAEKDLAFIKECKDGSGFLLNLIDSPGHVDFSSEVTAALRITDGALLVVDCVSGVCLQTETVLRQAIGERIKPVLMINKMDRALLELQLVPEELYQIFQRIVEKVNVTISTYAEDEKGPMGNVMIDPVIGNLAFGSGLHGWAFTLKQFAELYVKKFAGKAQLGPEEYIKKVEDMIKRLWGDSYFDSTTGKFSESATSPDGKKLPRTFVHLVLDPIFKVFDAIMNFKKEETVKLIEKMGIKLDVEDKEKEGKILLKAVMRCWLPAGEALLQMITIHLPSPVTAQIYRCELLYEGPGDDEAAMGIKNCDPKAPLMMYISKMIPTSDKGCFYAFGRVFSGCVSTGLNVRIMGPNFTPGKKDDLYLKPIQRTVLMMGRYVEPIEDVPCGNIVGLLGVDQFLVKTGTITTFTKAYNMRVMKFSVSPVVRVSVEVMDPADLPKLVEGLKHLAKSDPMLQCIIEDTGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPFASYRETVSDGSKQLCLAKTPNKHSRLFMKACPLADGLAEDIDKGRVTASQEMNARAQYLAENYKWEVTEARKIWCFGPEGTGPNILVDLTKRVQYLNEIKDSVIAGFQWATREGVLCAENMRGIRFDIHDATLTSTAIHRGPGQIIVATRRVLYGCQLTAEPRLSEPIYLVEMQCPESVIGNVYGELVRRRGVVFSESQVMGTPVYLLKAYLPVSESFGFTADLCANTSGQAFSQCVFDHWQILPGDPMDPTSKVAHIMADIRKSKGLDEAIPALHCYLD", "length": 854 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q1PEY5-1", "protein_name": "Probable 3-hydroxyisobutyryl-CoA hydrolase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASHSQVLVEEKSSVRILTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQGRAFSAGGDIPPIVRDILQGKLIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSISLTALEAELYKVGSSNQTFISTILDAYAEYPHLNQHSSYHRLDVIDRCFSKRTVEEIFSALEREVTQKPNDWLLATIQALEKASPSCLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGDISKDFVEGCRAVLIDKDRNPKWQPRRLEDVTDSMVDQYFERVEDEEGWEDLKFPPRNNLPALAIAAKL", "length": 378 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1ZXA5-1", "protein_name": "ADP-ribosylation factor-like protein DDB_G0292332", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDFIISFIKNLFGFLTIKKVMILGVENVGKTTLLYNIYKFYSENITTTTLSSLPIPIPTNGFNVESIVIEQVKFDIWDIGGKETNRICYRHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQISLKNVPFLLVANKQDLKQQTIEIDEILKTYFDKSSINETILMSQNNNDDLIKCINWIFSN", "length": 186 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q1ZXJ4-1", "protein_name": "Acetyl-coenzyme A transporter 1", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLFTLLKRHFGNELNNIVWLVLLYLIQGIPIGLSFGTIPFLLHKHATYTQIGIFTISTYPYSLKLLWSPIVDSYFVQSFGRRKSWIVPIQILAGIVFITISFFIETLLEHAETKIIYITIVFFLLIFLMATQDIAVDAWALTILSKPYLHYASTCQTIGLNTGYFLSYTIFLTLSSPKFANKFLRSVPSEEGIITLPGYLQFWGILFIILSIYLAFFKDEESTTITTTTTRHDNYNNNNNDDKNKQVKSKIENESIESKSMRSSPSSLSPSLLSSPVKKQNKKNKQHISIDKKDITIIKENNENNEIIDNNNSNNNYDNGKKSIVQETYGMDISESDLTPKQVYYLLWKIITLPHIKILSILFIISKIVFQPNESALNLKLLEKGLRKEDIASFSLIQFPSIIIFSIISSKWVKNKPLTIWSNAYLVGVFFILVNMCSVFYFPNLNGGEISWSHFFLLLMISLFSSFSYNLMSVSQGSFFLKISDKSIGGTYVTLLNTIANFAGTYPKLFILMLIDKLTTSECIVNISNDNSSSSSSSSSLISTSSNNLTTTTTIIQEQQQQVIIHDNISKELCAEQNGKYRIERDGYYLVATGAIIYGVFIYFVLKRYLTPIEKLKL", "length": 618 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q23888-1", "protein_name": "Large ribosomal subunit protein uL2m", "gene_name": "mrpl2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVLNWRGVKSRLYSGKRRIDGRNKGLIAIRSRGGALKRKYRYIEHYKQKWMDKWLFVMRIEYDPNRSAHIALCSILKEGIYFYVISIAKLEVGSLIITSALKLGTLQVGNTTKIKNIPEGLLINNIELIENSGSKISRAAGTSSLIIKKYNKKYSLVKLSSKECRLISNECYATIGTVSNIERKLKQNKKASYSRKRGIRPIVRGLAMNPVDHPHGGRTKGGVHWKSFSGKLAYNVSSRKKTKMTSRYIIIGHRKQKIMDKQIKNG", "length": 266 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q24113-1", "protein_name": "Protein no-on-transient A", "gene_name": "nonA-l", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MEGAVKKNSLNSSPLPQRQQRGNSTNKNLGKPTPPKLNAASDGNPAEKKARLGGNTQNGGGVAGGGGTGGGGGGGGATGGVEFSRNRNRGGNQNENRQGFQVANNSHQKQINESPKPAAGNVPAKNNELSAGGGGQNQPNHSNKGQGNQGDQGEQGNQGPNFRGRGGGPNQPNQNANQEQSNGYPGNQGDNKGGQGQRGAGGGKHQRGNRSRRSGGSGIMNSSMGGGGQRGEDFFIAQRLLDISGPTHELPPIELPTDNKFVGRNRLYVGNLTSDTTDDDLREMFKPYGEIGDIFSNPEKNFTFLRLDYYQNAEKAKRALDGSLRKGRVLRVRFAPNAIVRVTNLNQFVSNELLHQSFEIFGPIERAVICVDDRGKHTGEGIVEFAKKSSASACLRLCNEKCFFLTASLRPCLVEPMEVNNDNDGLPDKTLNKKSLEFRHERSVGPRFACLNSFEHEYGSRWKQLHDLFKSKQDSLKRELKMEEDKLEAQMEYARYEQETELLRQELKKRELDNERMKLEWEMREKQAEEIRKREEEYMHRYQNQLLRHEEDMRARQQENDLLMQAKKLNMILDQQEGFGGSNSGFEHFDSPFEVFGNNSNNSTMAGPGGPDNSDGNQHGHIDSWGHRRF", "length": 630 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q2PRK7-1", "protein_name": "Odorant receptor 106-10", "gene_name": "or80a10", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANETFVKNVDSFIITGFDHLQNQKLLGSLILISYMFILLGNGINLCIISTDRHLHKPMYILICNLAVVDIMYSSTCSTTMISVLLAEIKTVSYYSCISRTYFFNLGDLTECMALTLMAIDRLIAINLPLRYHSFVTNSRILWLIFLTWIFSFAVIGFLTYVADTLPYCQPIIKYVFCSYSSLVRAACVDPEPYFAISTVYSMVTLCGLFPFILCTYAVLAYSVTKLANSSRKQMINTCLSHIIVLFSFYLPKIVYILLTRIGLVLTLTERNAVLIVSCFVSLLVNPTVYCIRTKGIRKRITDIFLYTQKITK", "length": 313 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2YDJ5-1", "protein_name": "Uncharacterized protein CXorf66 homolog", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIVIGTLITGYMVSCTCLLHYSCDSEEAHTAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKPVSQVSPSYPEKAIKSTWPPSLQCRAKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSRNN", "length": 361 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3L180-1", "protein_name": "Alpha-defensin 26", "gene_name": "Defa26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALFLLAFQVQADPIQNTDEETNTEVQPQEEDQAVSVSFGNPEGSDLQEESLRDLGCYCRKRGCTRRERINGTCRKGHLMYTLCCL", "length": 93 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3TR54-1", "protein_name": "Gasdermin-C4", "gene_name": "Gsdmc4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGYSFDRASKDVVKKLQGRDLRPVECLSDATKFRLFHILQETPRSGWETEDIPVGFTLLDLLEPNFPVPEPEVSAPKPFIHVQSTDLEANLNVADIARGGVGYVGYGGYNIEVQSTSIPNPKLEILQNRKLLDKLPTFMKFCRMERKNLYVVTEAYEVSKDTMLTGLSSVNLLVKGFFKQLFKVRGKAGRSEKYSIPIPKGSVLAYKKQQLVIENNTCVILPSATKKKMTFPDRPLKLYDLPVTLRYQEEVIETGSWIDDIDPIGTIEEPANLNFMCLQHEVSEQTQLLAELSKDVQEVVFSSFLHMLSDRDVLYDLMKMLELNQLGHMDGPGGKILDELRKDSSTPHDVLKDLNLYLLQALLVLSDTQLCLLAQSVKMGLLPHQVELVKSILQTNFKYSSNTPFTLQPQLLAPLQGEGLAITYELLEECGLKMELNNPRSTWDLEAKMPLSALYGSLSFLQQLQKANSSSKPSLSPGYI", "length": 480 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3U0I6-1", "protein_name": "Endoregulin", "gene_name": "Erln", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQMVPPRSIQNEDFWKNPWDVGGLTVIGLFTSTFLLFVLFAVVFGYVEKAVFEEE", "length": 56 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3URS2-1", "protein_name": "Zinc finger and SCAN domain containing protein 4F", "gene_name": "Zscan4f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIMQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3ZCQ0-1", "protein_name": "Required for drug-induced death protein 1", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVGARLRSKASSLVGRGPLGRLRRAGDEETDAIVEHLEGEDEDPESQDCEREEDGRRAGTPSARRVHLAALPERYDSLEEPAPGDKPKKRYRRKLKKYGKNVGKAISKGCRYIVIGLQGFAAAYSAPFGVATSVVSFVR", "length": 140 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI3-1", "protein_name": "Defensin alpha 3", "gene_name": "Defa3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGTLTLLTTLLLLALHTQAESPQGCTEDQKLLIMEDQDISISFTGDKGTALQDADVKSGVICNCRPRGCSFKERVYGECGYNGHILRLCCQPLNTMNKKSPSVI", "length": 104 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI6-1", "protein_name": "Defensin alpha 8", "gene_name": "Defa8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKTLVLLSALVLLAFQVQADHIQEAEEETKTEEQPADEDQDMSVSFEGPEASALQNLEIGWPLKQCHCRKFCRPYEKAEGSCRPGLFIKRKICCIQQWTPGRT", "length": 103 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4KL71-1", "protein_name": "Small proline-rich protein 2A3", "gene_name": "Sprr2a3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q504N7-1", "protein_name": "Pyrin and HIN domain-containing protein 1-like", "gene_name": "Ifi214", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLTGLMGINDHDFRMVKSLLSKELKLNKMQDEYDRVKIADLMEDKFPKDAGVVQLIKLYKQIPGLGDIANKLKNEKAKAKRKGKGKRKTAAKRQRQEEPSTSQPMSTTNEDAEPESGRSTPDTQVAQLSLPTASRRNQAIQISPTIASSSGQTSSRSSETLQSIIQSPETPTRSSSRILDPPVSLGTAYSSAQALGVLLATPAKRQRLKNVPKEPSEENGYQQGSKKVMVLKVTEPFAYDMKGEKMFHATVATETEFFRVKVFDIVLKEKFIPNKVLTISNYVGCNGFINIYSASSVSEVNDGEPMNIPLSLRKSANRTPKINYLCSKRRGIFVNGVFTVCKKEERGYYICYEIGDDTGMMEVEVYGRLTNIACNPGDKLRLML", "length": 393 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q54B59-1", "protein_name": "O-methyltransferase 12", "gene_name": "omt12", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDWDKTMDLLFGFVTGHIHSRMFETILKFSICDLLEDGPKHYSEISKIIGFKNESYCYRLMRYFVPYKLFNESVVQVGLFSKTPSSTQFSKNGTLKNLGRFHCQDHHYRIFESLPKTLEMGKNQGPSSIGLSSFWEHFETDESYKQLFHNAMKDYTSLIIDRLISKISLSPNFKTVVDIGGSHGFLIGKLLESNPNIHGINFDLENIINSSTSKNENFQHPRLKHVSGDFFNSVPEADCYILKYILHDWSDEKCITILNNIHKSLKPNGKLFINDLVLDPSNYTKEAVFKDILMMQYFDAKERSINEWHQLFEKCGFKIDSVDTSISPQLMIVSKINSSNINLNDCTNFNSEIVEEKLKNSLPQFVNC", "length": 369 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B60-1", "protein_name": "Probable inactive O-methyltransferase 11", "gene_name": "omt11", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MECSESLELVDKFACGHILSRMFNVVMKHSICDLLEDGPKHYSEISKIIGFKDDSYCYRLMRYFVPRKLFKESVVQVGVFSKTPFSTEFSNNGTLKKLAKFHCNSFHYKLSQVLPETLEIGENQGPSSIGLSDYWEQIEKNEIYKNEFNDGMIGYTTHILKFLKGKIDLSKFETVVDIGGSHGYLIGSLLDRYPNVNGINFDTDMVINSSNEKYQHPRLKHVAGDFFKSVPEADCYLMKLILRCFSDEKCCELLKIISKSMKSNAKIIILDIILDSSKYLNFDTYLDILMMETLDGKQRSLSEWIKLFEMSGFKIDKYESGSPNYLIISKE", "length": 331 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B86-1", "protein_name": "Hly-III related family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPRLDHKKNKEEKDNEPLMMVNNYNIGIQTDNNQEDIQNDYHHFNDLSINIKNNKNNNNNNNKCNSLHHKHYHNRFIINGGNNNNDNNNNNNGDDCCANIELFVDLMLSENEYILSGFRLHTKNSYMECTKSIFKLHNDTLNIWSHLLGALFYLVLFFTSIIKIIKLNNNDGGGGGGIGNNFILNSDEIKLLETIDLPSNFNYLFFQLSCFICFLSSTIYHTYRSHSIVVFKTTLMLDVASIALLILSSVCLIIDSELSCWPYFKRIYLFSFLILILISFLSLPKIMREKRYGLRTFLFAILALQGLVGHLFKIYLQGYFDKDPNQFYNLIGAYTLFGLALSIRRFKVPESFKPGHFDVWVNITFNIVYNII", "length": 372 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54BG8-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGKIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54C66-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKTKKYKNPFPTNSYKEPENDSDNEYILHNEEDNEDYGSNNNNINNDGFSYEDNIENSDTEDEREDYGYINYNTNNEEDDEPIDLSTPIKKKKANNKSFKPPYKNTTTTTTTTTTTPPTPPPSKSNNNNNNNNNNNNNNNNNKNKENINKESEYELNKFLDLYNDFKSESDNKVKPTATTTTTTTTTTSTSTSKLNKDKKGVIVIESDEEKEDNTIKINKRNGKRKEGEQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQGNEDNLKSENFNKFKKLKSFSNQPTPLPPMLSNPFLNNSGNSHNNNNNRILFNSQFTNASNLNNNINNNINNNINNNINNNINNNINNRNNNTNNYTNNNNNNNNNNNNTNNNNSNNNINNNNYNNNNNNSFSFLPIRSNTLPTIVTRRTGIQSSSSDNGNSNSNHSSSMNKRNTSKSNNKKSTTTTKTVLPPPLSSRTQEEEDYALALSISEGLNGGSGGGSGSGSGSSDNSTKTKRSKSENDLPNEETRHQVEMDRRFAEQLHREQHENINQIQQLQRRLHLNQQRTNNINRNHHGDEDEEDIEMLNLRAYQQIQQQFNQHFNQQLNQLANHPLANLFSHASRGRGRGARRIPHHPHHHHHPHQAQYLTGLSQEQLNLMTRDFSSNDYELLLQLDENINNKGATTSDIENLPVHTLNKPTATTTSTTTTTNSSTSDDNKKNEPTTDVTCCICLCEMEPGDAVRTLPCKHFFHVSCIDQWLKVNKVCPIDKKAIDEK", "length": 766 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54CY8-1", "protein_name": "Obg-like ATPase homolog", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKGIKLFNNFTNTKQILFFRSFSTAAKGDRLKASHYVKTRGSCKSISIVGLPNIGKSTFFNALTSSNAAMAANFPFCTIDPNIGKVFVPDERLDYISDLLKTKSKIGVQLEFVDVAGLIKGAADGEGLGNKFLGNIRQTSLICHLVRCFEDKGITHVSDEIDPIRDIETIETELILADLQSLEKMLTEGKKKQSNPELQMKFDLVKRISEYLHKGLPARDVEITDMEWPVFHSLHLLTSKPTIYTCNVAEGDAATGNKYTDLVKEYSKSKGLEIEPVVISAKIESELANMEGNDETKKEFLQLYGLENNGLSKVINGAYKLLGLQSYYTASSNECHAWTFKAGWTAPKAAGVIHSDFEKGFIKCDTISYNDFIECKGDEKIAKEKGKQRSEGKAYIVNDGDILFFKFN", "length": 409 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54D44-1", "protein_name": "Probable polyketide synthase 42", "gene_name": "pks42", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIESQREFNCIGGDNQNGVAVIGVGFKIPLDLENCLSSPSELYSALFNEFDSVTKNTSSRWSDNYFKNGDIVSLSAGLLPLREIKSFDPTFFGINPSDADLIDPQQRLLLKCVWNALEDGGIDPISIRSSDTSVYIGCSTIDYFLLNRNPVDPHNHGIQTASYSIPNRISYCFDFRGESLFVDTACSSSLNAVHLGYNSIINLKSKLSIVGGSNLILDPQNSIFFSKQQVNGPSGKCNSFSEEADGFVRSETVGVVVLKNLKDAIKDGDRIYCVIQGSNSNVDGNYEKLNYISPSKLSQAENITKALKSTNGAVNASDIDYFECHGTGTPTGDPIELEGISIALNRTQQSTTLSNPLLIGSIKSNIGHGEASSGIASLIKCCVMFKYRQFLPNINFKTPNPLIKFKEWNLKVVTEPVPFNNNKQTIMAINNFGVSGSNCCIILSEYKSNNNNNNDFKATTHLKSKKFIIPFSSNSSTSLDNYKSLLSNETNNFQDFVIKQINNKSTSLIQRSVIIASNWSEFNESSNEIQSNIKKSIISNITIKKKNAVTVFVFCGQGSQYNKMALSLYENEHIFKSTMDKLDKELSKHYGYSILEKLRSITDEDLVTIHQPILAIPVNVMVQVSLYELYKHWGIKSDIMVGHSFGEIACSYCSGMVDFKTLCYLTYHRSVAQNKTIGSGKMLSINIGAKEYLDSYSTKYPSVEIACYNSETSIVIAGNEELLNEISKDLKSKDIFTAMLPSLSAFHTTHQSVIKDDICSLNFKSTLSKITVFSTVTSNQFGINNNNNNNNNQLNSNYLFQNVIQPVKFSETISNIYKYIESNDMGNEITFIEIAPHPTLQYYLNQMKSQQSEYFNNGEKISIYSACNKKKNDYNEFLKTISTLFVNGYNNINFKSQIINNNNNDNNNNFNLPLYQWDDNEYYKIHPTWKKANKNGPSINHLGNLNDSSIKSFKTYINTRKPQFQWLKGHSLKGKVVFPGMGYISNLLSVYNMNQDITINEIQFKSAFILVDGVNNCLETSIVPLTKNEFNIKFHFKDLKTNKWVLCANANYSLFKHNDNNDKLDIEKLKSNCNYTIISKDELYNNIRAKSGLIYKGLFQGVKEAFIGNRCSLTVLSLNEIENQQEFKHLLENRNFNSLFNTAILDSCLHGSLHSKEQSQIYFDKCEGFKYYSNNINLATSKRNEYKEINVYIETNPVINSTVIVSLKIMLPDGTLLIEIQKVVCKSSIPIIDSTSVIQPSPKDLHTPYYQPKNSLIKPPQSFKHLHCMKEFASIESDNREMVYMSIYHLIFKAINARSPTKINLESLENLTLDQFKELIKDSAANIQRSNQFIYECLKLYHTNHSNYKKNQIKDFIKECEDFNGYNQIIFKTIKIYAKSLFPLPDDDPFTDTIQSLFEDDQLENVYIHLKHLYPVNNLLSEIVFQSIKPIINQTSTFRILEIGAGYGTISQLIFDKLEQLLADNFTSSRIDIEYTFTDISNTFLPRAKERYSKYKRFNIIYKLLDLELPLTEGIQDFRPLYYDIVVMSNVLHVVKDINFSTNEIYKVLKQNGQLIFVEPTYKNLYLDTIFGIFPQWWSFNDDIRTDRCCLEPSKWFEFLETINFKDTIILGQDNKEILKNVENSIILVQTRKPSQLELSINNSPSTNQFKSFENIILYTDDNQQPNDCSEIIDLLKSLELPIKIINNIDQFNQIIKTQYNNNNNNNNNNNNNNNNNNNNTNNNLIIFLKSVNQLNTNNYKDITFEYVQINQILVKLELEENYKLLLITNNSQSSNYLSNSLIGTSRYLFADIVSSKLDIITIDFDTVSIKNHQNVISVINHLLDSKDNSEREYYIINNEINIERYKNESNIKHQLKSKTFQENKDELMVQLDSNLEYRLKSKSKQELKSTHVEIQVKAIGINYKDYATYSGLIDSIIEIDKDKEKDENYDQNYPSIGNDFSGVITRIGSDVRKFKVGDEVCGLAPKTSASHIITEEGYLCKKPSNISHSEAASSVTVYTTSFQSIYSIGDLKKNETILIHSGSGGIGLSALEILKWKNHQGYIFATVGSEDKVKYLTDTYGSFITGIYSSRDKDYQDQIKEKLKSLGCDIDHQGVDLILNTLSVEYMDSNFKCLNQKGRCIDLSITHLTPFDYMDYNKFKFNVSYGNIELVVLPSKIIKDHLKKMLKAFSLGSLRFIPIVEFSNLNIRNAVEYINQRKHIGKIVVKNDVDFINKLFIEQQQQQNSVENNEILMKDKYDISNLELGKNILLTGQTGIILTILKWLYKHSNNSIENIIIISKSKLKWELELFINESTNNRIKIHYKQADVGNNNELNQCFEELRLRHSIEDINSIFHFAFINDIGQFEDVNMNRMDIAHHAKAIGSLNLHNQSIERKWNIKQFVLASSALSVFGGDNQCCYISACSVLDSLSKYRKSIGLPSLSINFGGVTSTGFVSRSGAVEANLESSIINLITPQSLISSLDLFIQNSQTFSNYTHFNFIYDNIESYSLNRMLFKFDYLINQHSSLVSNKRLGGINENNNIGDLLVSKIGELLSIEPSKLNLDFRLVDYGLDSLVIVQLKNFIDKQFQPHLISILQLQNNKISTTIEIIIKGYNNNQNKKIKNEQSNDIPSVVQKETIKDNNENKDDIKIDMDDKKENLKGKKENIDDKKENNN", "length": 2655 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54E06-1", "protein_name": "Transmembrane protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTIINNDNISLATSAKLSQFIVSGDYKGPFTIIGLKTKILSFSLVIEFILLKIELIKERKDGLKINFDDSISGSCNYELNYTKQDTLFQRFQSKFKIEHTINPENGETINTGITLKKLFIISIPMSILFVALNWIWMLAISMTEVSISTALYLKILKTISVIIFMGGIVGIAITTVGTSKGEYPHAIKGEILMIISAAMWGLYEVLTSKFIGDANRTIVHTYMGLIAFVNLILGIPVIVILNVTNFEPFSVPSISVFGMLLLNAFVGFSVNYLINWGLSVTSPLFVRSGELMVIVATLLFDIIIKHMKLPLLALPGYSLIVIGFILSVYIESRDIKQQQEKEKEKQKNNNGETESLLNY", "length": 359 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EC9-1", "protein_name": "DUF781 family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKIILIFFLINNIFSIVVSSTKLNPWVFEERIKLYDILINSTKVEIFGDDNLNNCFQGFKIQLEWQKTTGRSMIIDNSNISVNSWWGSMNYYESIIPFISAMNLGIIQPPIELVNIGDDRFCTDYSECDKELMEPWDLYFQFLIKIKDEKYSYSIQQQILKYNWDGHMKSLSIGLKLFNDKLNYLSKNEIKFSTGFVHFVDIISLINFNTNYSQILPIFDSLPPRMLTNSDHPPFFKGFTRTQNFYTVSVLSINELHENQILWNYFLNLLKTKTENEKCRDFINQEIINFTKYPESTLVKLLLKLLLNNC", "length": 312 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED6-1", "protein_name": "Probable polyketide synthase 41", "gene_name": "pks41", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDSKNLVDENCNKVAIIGIGFRFPNLKGDITPNELWSKLLNRYDGIVKNDRWNESFFKSGDISTNYAGFIPFEELKSFDPLFFGINPSEGIHMCPQQRLLLKCTWEALEDSGIDPIEIRGSNTSVFIGCSGADYQNLNKNDNKVQQEIFSSSTHSISNRVSYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNISKSYSRLNILSKDGKCKSFDAGADGYVRSDAAGIAILKNLNDAIKDDNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGQVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSDNPLLIGSFKPNIGHTESASGISSLIKCCLILKNQCFVPNLNFNKPNPLIKFDQWNLKVVTDPIDFSTLNYINKRVSIAINNFGVTGSNCCLIVSSFKGNQIRNNINNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVVIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNVTMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLNEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKKDGVFCAILGSPTSFHTSSQLSVKDEILKISFKSKQPTIPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEVIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSDHNNTNNQTRVNLPLYQWEDQEYWKLDNLHQYHLSNGPSINHLGISNSNHTPIKSYQTHINIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGESKTDTNPNKELPDILISFIEFKTPLIFMDGISQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGPNLNEDDEQSLFMYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVDKCYLGYNCSLSEISIIQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEELTYYSSKVPKTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDPLAMEYPTNEIYSCNLQSKDSLIPSLSSFDHIFKRKIPNEYVDQINIYESFIPKLLFSNINKRCPEITIDEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRFNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIIGDGIFGVFDQWWSFQDTEIRKDRCCMKQKTWYKLLKSVNFNDDIRMTPELTCFVIQAQKPSISNLSFSKSETTNYDSIIVFGNKYASNLSNHFIKSIDNGNLQFISTIEELNKIGKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNCKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITRISTGSKEFKVGDHVYGIGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITHYSIEKVKESIEFINERVHMGKIIINHENQDSIINELIEKQKSINKFDQSIFKQNYKLEPSLLGRNILLTGQSGIVLEILKWILRNSENNSIGNIIILSKSSIKWEMEYLINKVKLINKLGNFFNNIKFHFKSVDISDSGLIDESINKLLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKLKNFIMSSSVSSKTSTANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIESTGFVSRNESVAALLSGEGFIPISANLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISEILSTDILKLNKDIILVDYGIDSLVIIQLKNWVDKEFSIPNELTIQKIQNSTINSFIQLVKNSMDKNKK", "length": 2542 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED7-1", "protein_name": "Probable polyketide synthase 40", "gene_name": "pks40", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDYKNKYQSNENCNKVAIIGIGFRFPNLKGDLTPNGLWSQLLNKYDGIVKNDRWNESFYKTGDIPTKYAGLIPFEELKSFDPLFFGINPSEVIHMCPQQRILLKCTWEALEDSGIDPIEIRDSNTSVFLGCSNFDYQNLNKNNNKIQQNIFASSSHSVSNRISYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNTSKSYSQLNMLGKDGKCKTFDADADGYVRSESAGIAILKNLNDAIKDGNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGGVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSNNPLLIGSFKPNIGHSECASGISSLIKCCLILKNQCFVPNINYNKPNPNIKFNQWNLKVVTDPIDFSTLKLSNKPISIAINNFGVTGSNCCLIVSSFKGNQTNNNNNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVAIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNATMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLSEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKQDGVFCTILGSPTSFHTSSQIPVKDEILKISFKSKQSTYPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEIIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSNLNENDNIQTSLSLPLYQWEEQEYWKLDSLYQHHLSNGPSINHLGISNSNHTPYIKSYQTHIDIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGDNSESTTNPNKELPDILISFIEFKTPLIFMDGVNQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGQGLNEDDEESLFKYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVEKCYFGNNCSLSELSLSQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEGLTYYSSKVPTTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDSLAMEYPTNEIYSCYLQSKDSLIPSLSSFDHIFKRKITDEYVDQIKIYESFIPKLLFSNINKRCPEITIAEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRVNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIVGDGIFGVFDQWWSFQDTEIRKDRCCMNQQTWYKLLKSVNFNDDIKMTPELTCFVIQAQKPSISNLSFSKSETTNYNNIIVFGNKDDSNLSNNFIKSIDNGNLQFISTIEEFNKMTKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNSKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITNIGSGNKEFKVGDSVYGTGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITEYSIENVKDSIEFINERVHMGKIVVDHENQDSIINELIEKQKSIDKFDQSIFKQNYKLEPSLLGKNILITGQSGIVLEILKWILRNSENNSIDNIIILSKSSIKWEMELLINKTKLLNSNSINSMGNYLNKIKFHFKSVDISDSGLTDKGIHELLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKIINFIMSSSITSKTSSANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIQSTGFVSRNESVAALLSGEGLLPISTNLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISELLSTDILKLNKDIILVDYGVDSLVIIQLKNWVDKEFSIPNALTIQQVQNSTINSFIQLVKNSIDKKNKK", "length": 2552 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EN3-1", "protein_name": "Alkyl transferase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNCSNNSENCNINDNKKKEENVKNQNSNKNSNNNNNKSNIESIILNKKSKFSSEKELDEKENKDLKDLSNNKPINIDEYEGLPRFENEQNARSKSSLWSKLCDWMYDQNFKIASSTLKNGPIPKHIGVIMDGNRRFAERNHLETKEGHKKGFNTMLDLCQWGLTLGVKIISVYAFSIENFKRSKSEVQDLMELANNKFTEMISKSHKLQQLGVRIRVVGDHSHIPEKTKSILAKAVKSTENNTKALLNICLSYTSHEEILHSMKILSKGVNQEKKIEIEDIDQDLFENCLYIKEDLDILIRTSGEYRLSDFMLWQSCFTNLALVNTLWPDFSFFHFIYIIFLYQFNSKTLKNEIQNQYKFNNNNNNNTDNNNNLKENIKNLKSDQRVKEFINHLKISEEKLFDEFISKYNEEEEEEEEI", "length": 420 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54F52-1", "protein_name": "Saposin B domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLIFIVCLLLIFNYFIGISFGNKQINSNQQQQIINTDKNYNHNKNNKIIVSHNKNNNNNNNYNEIETENLGCTFCKYLTEKVEEYLQANSTEKEIISYLDEECELLNSPNLVLTCQNLVQQYTPIVIELIDNNESPSVICENVNICPTSSSSSSSSSIEEEIIKKLNIDDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEEEEVNTCEICNLVSNLIEKYIKINNEVDEIRELIENECELLSNSKVSSCYSLVDQYFEHFYVTIENNYSANEICQLFQFCPIESSSSSSSSDIINNIPLQDSGCTVCTVLANYAYKVQANESIPEIIGSMDEICNKIGAWRDICNSIMRSGGQQLVEDIVNKGEGVYTACSNIGYCQSSSSATGTSGFSSGGSGTSTGGGYSTGDFYYKPLK", "length": 416 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54GT5-1", "protein_name": "Endoplasmic reticulum junction formation protein lunapark", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLFSKKNGFEKQLLDMETKILNLEDKLSNSRIFHQKVLHKIVLYSFAIEFFIILFTYVKSRSLESIPEKLFCCIYLVLFPIFILILTKVYGFVYKYLIKKNEVRLDSLKTGLQKKLDERKRETDYENTQKLLDRYEKNPPSPTNKPLGPPNLNNNNNNNNNNNNNNNNNNNNNNNNTLGNSMRNRNQPFNISSQQNQQQQRMIQPQQLSPQQLQLLQQQQRLSQQIVPSQQQQSQSQPQQQQPILNQPYNINNNNNNNKPPPPIQLPPQQSSQYIGNQQRLPPQQYQNEQKSKWWLDKLVDYLISDGPTHGSPLICSNCHSHNGYVPVEELSNIQFRCRVCKTFNQRDSVNNSTTNDDRNNSQNTGSNQQQSQSLQDQQPSIEEIDKNFSVTEQKNETNNENYSDSEKQLEENNNNNNIDNDSGSSSSQNTPNKKKGKGKGKGTPTKKTN", "length": 452 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H60-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLDFFHLKDVDEFFRLLEKKNLQNLDNQIDGPGNLNWRTTYTEKDFSKVPKFRGIIHIVQIRDLGTKIHRDLLYEIMFEKLLDIARLNNESKLLKNEIQDLKTKLDEYHNNNSTTNTDLIINSFINVIDTTTTTTTTKTTMGATSIDKKQSEGDSIDKSIELDFFKIKSDQSQQSSPSHKLEEKQNQVNNITNEIPQESIKTVKQQTQTETNQQTFSSTSPSHQNEEKQDKQEEVKQEEVKQKEGIQKEDKKEEDKKEEGKQKYGEIFIIEIPQEEEKQKEEGKQQDGENFIIEIPQEEDKQKEDKKEEDKKEDKQEEDKQKEEKLEDKQKNGEEFIIEIPQNETLEIKVDTHPRSSNDDVSTAEMEVEALKTPLFAETTFVTKQQVITNKKLLVYKQSDFFPNMTTLLQSRLKDVTVQEVKDLTKIGLNDNSYSVGDFENVFVLYAVSCMGARTDSERDAFKIKSIRSIIGDKVPIIYGVFMIGKNGPTRIKVEHTQTSISITHSMSDIGRNLQNNENLKQLQSFLQQ", "length": 529 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H72-1", "protein_name": "Tudor domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNIDFEDYEFYDDSDFEINTVDESVMTYSSVFDFLRFGKIPKFDTQTKMKHFKDNISKYRIESKDILHTNVDSKILRRLSEIPRVEKIFPDPNTLQLEVFKPNHELRNSNGELLSKHRPLQETLKLIEKQYYWECKFIHTSMEVDITKLYSFCDLCSQSSVSRDMDIDSNDEDKILEQMDIVEKSFSNDRNNNNNNDDNNKSIDEKDKMNICGIGIDLEAIKEGKLFEDELAEALGFPEYNSSVDNSFNSSVNNSNLNNSSLNNSLNNSKNNNNNDDDNNNNNNNNNDDNNNNNNNNNNNNNIISNIDNNNNNNNNNNNISNIDNSNNNNNNNNNNNNPVNDDFSFIIPKDYQSKNHLNDNENKDDEKDDDKDDDKDDDKDDKDDDKDDDKDDDKDDSKDNGYIKTNVSLSSSSSSDNERDDGDSHSDKSVDNDENNNNNINNIISDCNNNNNNNNNNNKINGRTFTSRRTRSDSNTSNSSVGSYISNSSKSSANSYDFSSSDQDYKSPNSPTVKKTRGASLVNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNSILKPKLKSKRASASTAINSFISQFITPKHPPKSSSRLKRANRSNDSSDSGDSSSNNSSRSSSDSSDNENNNSYYLPIQSRRSTSKQILKDHLKSPTKKPRRIIEEDFYHVEEKKSPTSKISTPISRSASYNFGRSSPGSSPGSSPSLSPYSSPPQSPPHVYNHNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNYNNNNNNNNNIRSILKSPQSPSISPIKTPRRSPQQQQQLQLQLQNYIPMPTKTKTPTKAPYVPNYALAPIEPKPTQKTPVHVFGGNQLSVKKRQTIEDMITEVLKMNVDTAALKLPLPKVGQHVEGKSNMEDYKDAWFKGVVKEVLPNDFFLISYIDGGEEELSYTRLKPNLTSELEPLKLEEIVVGGEYLGSYRNFYYNVYVLEILRHSIRVYFADLEMAKTIKYSQLYLLSSFVKR", "length": 998 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54HE0-1", "protein_name": "Conserved oligomeric Golgi complex subunit 5", "gene_name": "cog5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNNNNNNEGVSSSSSSSSSPLPNISSPNLISNSNIENDIEIKKKSNNNNNNIFEGDNSHIYNQFLGEDFNVVHYTSNALKVSSISLSLNTLTSCTRELGQELTENITTNYDDLFKLANNIKELDQLTDTLKLGVSNLEESIQRMKNDISEPYNKVKSHIGQLKRVQDSCELLRKLIRYIQLVKKLKNHLQAGSRDLSKSAQCINEINLLKKDSDLTGINIIDSQVVWIKTCSDQIITISSTLLYQGMENQNQTDVANSLQVFHNMTILNEKVYSIVNLTTEKVIKNIKALLNVNKLIADLPKTTITNNINNNNSNNNITTNNNNNNYNNNNNNNNNNNIISTSTDKSIWLKFESLIDTLYSSLIQILHLQRVLLKIKDPLTHKSLMEVLLIKQHQLQQQQQQQQQQQQQQQQQQQQQQQQQQQVGTTSNNTQPILIEMISTLFWKSILKVLENNLLVAAKSSNIIENTFIREYPKVSKFFLDFIKKLQNYIDIHQMDIQQQFMIVLSNINQIIGNNNSNNSNSNSNNSIESSLSTSSSSSSSSSSSSSTTTTATTSLILLSADDYKLSLFKSIGLFEKAYLEYSQSKMSTIVNGLFPQSTWSSRSTLPVIPNGKQLVDLSKTIWSEIEWLVGNNDRQLLGKLMLVVSKVIDLFSSKIESMVQPPGLIVLNSNIGSSSSTGGVNNNSNSNNNNEIITINENSKPTPSQTVNTLLFNVSIQLNSSIQSLLTSQPLERESIIVIEKSLNSLITICTNIITPLMNSFFTHIEQIFSTIHNEDWYNEKTTKMLINKSNQTCSSYMESFKTLVNYFQNQYLMRFTPCQLLNNQIKSMISKIFIVYLKYCSLLKQPFSENGKLKMVNDLTHLEFAVTPLLVSGGIKEIGESYNLIRNYKQSIFN", "length": 898 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54IX3-1", "protein_name": "Probable polyketide synthase 26", "gene_name": "pks26", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METNNNKNIQEDIAIIGFRIPGCQDNTPSELWNNLMNKFSGVGKTTERWSDNYHLSGDINNGNSGLLPLKEWKKFDPAFFGINPTMVSTIDPQQRILLKCTWEALEDAGIDPIKLRGSNTSIFIGCSTGDYLDMVKSNNEIQTNLFGSVNHSLSNRISYCFDFHGASMTIDSACSSSLNTVLLGCQSINQGKSNLCIAGGVNFILDTTIPTAFSFLNILSKNGKCMTYDEGADGFVRGEGAGLVVLKSLKDAIKDGNNIYCIIKGGNTNVDGNGNADKANFFQPSKQSQSDNIKLALESIKKKSMLDIDIDYVETHGTGTPTGDPIEVEGISKVFKENHSPENPLLIGSLKSNIGHMEAASGVTSLIKCCLMFKNKSFAPNVNFQKINPKIKLDEWNIKVVTEAIPFKKNKITSMVVNSFGVTGSNCCLVLTESINNNNNSNVDKITKNEKEYLIPFSANSNQSLKNYIEEVSKIDESLQFEDFVYKQLSNKSTSLFQRFVVTSKDWKELKYKLSQPLPLKEISSSISVKKPNPITVFVFCGQGSQFNKMGLELYNNDKNFRNYIDRFDKKLLEYYGYSVISKLRSIDDNDLITIHDPIIAQPATAILQISLFELYKHWGINPSFIVGHSLGELPMAFCSGMIDFDTVCYLLYHRSLAQSKTNGCGKMLSCNISSEEFVKNYSPRYPFLEIACYNSPNSIVVAGKESILLELSKEFKNSGIFCAMLGSLSSFHTSSQLEVKDHIYSLKFESKEPVIPTFSTVTTHLFNSNKLYDNDYIFQNIMKPVLFNETISNLYKHVENNQLGSEMIFIELAPHQTLSFYLKQLIPKDSNYFSNSNSITILSPLHKKKNDYLEIQQTISTCYCKGYDVNFKSQILIESKTNISNKSLPLYQWDDKEFWKDLEKQKRILQGPPMDTLGFSNEKSPILKSFETKIDIKKKPFQYLKGHIVKGKIYFPGVGYIENLLKMYPSQDIDIDSMEFEAPLILIEGIVTCLQSNVYKIGKNEFKVQFHFQDQKTKQWIQSSFANYHLSHRDDFDPTTNKLNIQNLISNNCNLTKLSKNQFYNFIKAKAGLSYNGEFQGVEKCYLGDNCSLVEIPFDTSNQDVETNINMIPILDSCLHGVHILYVEQCQMVLEKIEGLKYYSSTLILSKQKEQQKLYVFTRIENKDLINNSISASIIVMISDGTVFFEIESVSLKSLIPLKDPISIENPTDELFSSYLQSIDSLISEPSSYKSIYKRNEFISSGMSDLSRSDYQQFISTLLYTNLIKRNQSIESDLRNQIEFEEIKAKYCKNSKFERLFTFVIETIKQYDGINGNLNSWNEGNIDIYKILIKSTRIISKLLFPLQGEDTTIDTPQSLFENNLLDDFYNINGNTVIQNQLVGEIITQSIKPLINEKMVFRILEFGGGVGSLSIVTLNKINQLLEQHPNFQIDIEYTWTDISPSFIPDAKKLLSNIKGVTIIYRSLDLEESLIEKQLLKPSYYDFVIMSNVLHVIKEIKFGIDEIYKVLSPNGQLLFIETPYRMLICDSIFGVFDQWWGFTDTGIRVDRCCMKQKTWFKLLSESNYQDIIMSDDIKDCCFVIQAKKPSISSLEYKLKIDSQENDKIIVFGENDTFMKYLENKSTKQIIKIKTCQQFSDLITSNSKEINNQSIIYFIKTLNQLLIENFKEITLEYIQINQLLLSSGLSCKHILLLNQSTSENYLGSSISGAARYFDEFPPLKLYSFDFDKYSLNNESINIIDDIIEPIIKSMNNSNIRKELLVRNNKIFFERYKQEKRIKENYKSTSFENDKSLFVHLNANLEYELKSKQVKLKQNEIEVNVKATGINYKDYLVYTAMTPSELINHKGESNPEFGHDFSGIITRIGDDDGDNDNEFKVGDQVYGIWFNTTASHIIVDKEFLCHKPSKLSHTIASSIPVVYITSLYSLYNIGNIQNDESILIHSASGGIGLSALNILKWKNHKSHIFVTVGSKEKEKYIHDTYGDFITGIYSSRNKDYLKLIKRKLTELGSNKKGVDIILNTLSSSEHMVSNFKCLNHRGRIIDLSITHLNHNEYTCNNNFKYNYGYHNVEVLFVKGDIISKLLKNITSAIENGSLSTGIPIIEFNDSDCFNAIEFINKRQHIGKIVVNHNKENLIQELIKKTNLPIIKSNYQINSDHLGKNILVTGQSGIILEILKWIVKYSTNVENIIILSRSSLKWELELLVNKNKNKLNFIYKSVDVGNSLEIEKVIDEILMENPQINNVDSIFHYAFTQISCKEHEIDQVHLNVSHQAKTMGAINLHNQSIKRNWKLINFIMASSAAGLIGSTDQCSYVCSSNVLDTFSKYRKHVLGLPSICINYGLIESTGFVSRNQSVAVMLDGQGIRPMQTNQILGSLDLFIQNPSKSTNIILTSFNFNEFATGNLQQSNVHKFDFQFNCCLSQKSKLMANNQASENPVKDLLINNICELLSIDESKLNIDIRLIDYGSDSLTIVQIKNLIDKNLLIPNLISIQMLQNNSISDNIKILTDSYNKKKQNEQNELKNIKVGSFTKK", "length": 2531 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K45-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKILYLIIYLTLTIVKGAPLYNCKKLNCSSMNTNCKVFGCSPMFGCFETSKCPQSNVDICHTNHCDENTGSCYQIADTCNDGNNNTIDSCGPYGCVNTPVNPPEPTQSCEQKCNDNNPCTVDFCDFRGDCYHYETRCSDYDACTLDTCGEKGCEYRPMNCDDNNPCTADFCSMLYGCYHEPIECSVKVPCRTDSQCNRNNFCETYSCDLSSNICDYYTRDCGGNPCINNECRTGTITN", "length": 239 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K50-1", "protein_name": "Phospholipase D Y", "gene_name": "pldY", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIINRLFIIIVLFFVNVNSKIISESTLNSCQGGTIQIAESIPLGLDISTNLSTHDAWMDLITNAQESIDLGFFYFTLLGGSDLDPVYGGQLGIDIFNAIVEAHSRGINVRIVQNEPSESFPDTETQTLAKLGIQVRSIDWVSLVGSGVLHTKLIIIDESSAYVGSANADWSSLAQVKELGIVLKNCPTMVADTEIAFQQYWNAADFTSLPINDWGSNYQALFNNTNMASLSLNNNNNNNNKNKNNDNDGSGTNQMYEMFLAVSPPQFQSTYRTGDIDALMDAINNADQSICITVMDYTPTTLYNDPNTYWPLIDNALRAAAFNRNVQVRMLISHWNYTSPIIPQWLHSLNQVDNIQVRWFVVPDFSTNPQIPYTRVNHAKFMVTEKQSYVGTSNWSQDYFTVTGGLSYNVFNNDFTNQLQSIFNRDWNSPYTQPIQNF", "length": 438 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K65-1", "protein_name": "Band 7 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSIKKLSTTAIKFTKQTQRFNKRGFFKILNQYERGVVFNFGKFHTVKEAGFHIVIPFIQKCDIVDIRTFTYTLDKQKIISKDNINLTVDALVVFRIHDPKLAVTKANDCILLVNEMAQIKVCEILSHNTLDQVLHNRDKISNQIHDELKEALNKYGVTIEYLKLKDIHFDETIAKAIAKKVEAANLRDIKN", "length": 192 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KF5-1", "protein_name": "Protein LEG1 homolog", "gene_name": "leg1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSNKTIFLILLFLINFNSIYSFNFKKEIKISNDKINLPTYNPWIFQDRFNLYSILINSTNIPVFGEDNSNNCLHGLQLQFEWQNRSGRLEINQGHVNTKSWWGDMNYYLSIIPYLSAMKMGLVPVVEIVSINDQRFCSTYEDCDQEVLNNWDNFFQQIINIRNNGSEGDDQQLLKFMWTAHIGSIDKATKLFTDSLLLLPKNELRFGNGWAHFVDVIATVNFNTNYSTVYHLGQQLPPIMLNSNDTHPSSIESFTKEQRNVVLTMYEINDLSSNNLVWNSFMYLLKKMTKNEICRNLINNEINIFLNSPVPTIIEILFDILTNNC", "length": 326 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KK9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTEVPNQKHNDGGVGVTVGNFVKDNETNVNNNNNINGKGENDNNNNNNNNTIIDEPKLLNNNNNNILVIPLTTNIIDNELNQQKQHTLPLPLPPPPLPTQPQQITPPLPTQTQLPNNMLPSPRPIQQPKIRQQTQQQQAQMQQLQLQIQQEIQLQLQQQQQQQLQLQQKQNESEINGLFSPNFSSSSSSSLSTTPNMHSPLFNNNNNNNTTTTTTTTTTTTNSSTNNTNSSTQTKNASTNKISQDVIGVFDDTDTESEGEEYHSGRSIDFWNKDYKDIAWRCNWIDLQIRDLQYQSMVCDQLYHKVRRSKQKIIPDNKSLSSSIDNNNNNNLKSIPIETIDHSNNAITSSNIPYSNNEEEQQEQQQHPSQSIRTTSVVKLRKPRKLIRRPTVKLSAKQMTTDLEAHPLFTFHKGYFKFENAIKTNIINEMEIKYQEKEKPPKLLTLSEERLKQYINSNEDVDVVNLFATNESKRLSEKRRGRIPSDKKEKVSSHRLKSGDEIDGTSSSTATATTATTTTTTTTTTTTTNKKSRRSRREKKKEKEREKQEKEKHIKTKDEQKDREKKEKAREKELEKERKREKERIKEKERQEKERLKKEKELEKNKKKEKKLLKEKEKEIKEKKVKLKNQENIIEKDLTINNTTTKTTKSKKSSSKVKKSEQEGVKLENVEIEDEEVEEEEEEEEEVEDEEEEEEEEEEEEEEEEEEIEEVEDNEEEKRKEERRRRRRKRRILRRRKKLRRKQRKRQLFLQKQQQQQLLQQQQQQQQQKLLQQLKKRDESNGLSYKEIITPEWRDISSFANNDPSLPSPLLLSNPLLAQDIKNITTTTTTITTSEPISKFSTITEEELLIRQTTNGIDGTPMNGIGEDSESSGSEIELDEDAMKIIHARNEIEEKRRFFNTIKQIQMENPVPSYKRKKESLPVEFVAPTVEELLPSYHFNKKSIKLLGKSWNGDFEYYSSSDEDDYDDSDDYDSDDDNDDEDDDDSDSDDEDESDSDDYDSEYDSDLSDSDDSESESSDNELDGLYSSESEINHNSSGDEDEMDVELNNHHIPSKNSKNSKKQPVNNNVNNSNNLNGSSGGGKINSKPSKQQPRNSKANPPSKQQPTPLKQQPTPLKQQPTPLKQTTTPSKATPSPKQQSQQQQQQQQQQQQQPQQPQQPQQQQQQSPKPTPPLVSTTPPLSSVPLSPPTKTIRSTRGVSSLSNSTSSLPKQTNTPPISILSRKRNQSQSSVTDAPLSPTTTATTTTSPKPTTRRKGKLQETIPVEETKIIEETKPFEETVPIKENSTTTPLKRTRRQTKQQLVNGETTTPLTNGDNHVEKTDSNSTDVKVDPTSWWGDKQYKIQPVMEATVIRFKRVKNDDGDDDDQIQNNQKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNINNTEDLESKIKETKSINIPMEISTNGNDFQMKEKEGE", "length": 1472 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU3-1", "protein_name": "Probable polyketide synthase 25", "gene_name": "pks25", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDNSYLNNPQFDINNGNKEVTDDDNNKNNQDNLVAIVGVGFRLPSGENERNNTPQALWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGITPNEAQTIDPHQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGSSTNDYLTLNRNEVKSNVFGSMAHSIANRVSYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDPYPYKAFSILNMLSKSNGRCKSFDASADGFVRGECIGVVILKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPNGDPVETEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNENKNTSMIINNFGVTGSNCCLVLSQFNNTNKQKQQMKTKINNYLIPFSANSVESLKKYQSLIINSKENELKYSFEEFVKNQVFIKPTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKRSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGLGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGAGYIDNLLKLYPNQDLTINSIEFKTPLILSDDNGQFLQTNVYQTGKSDYRAQFHFKDNRTNVWVQTCTANFQLYNNGKVDKLNLEEIKSTKCNLSSIPWDKFYPHIKNRTGLNYKDKFQNTIECYLGDNCSLTEISLELPENFHDQESFFNTPILDICFHGSIVLIKDNCKLVLDKIDGFKLYTSNIPKNRFDHLSIFVYTTMKSTKSNSYNSTYTVMLEDGTVILEVENLICTSLTPVKDPLLIEIPTDMYYTPYLQSKDSQIQSPLEFKSIYQNNQDNDSLLIPNVVLETIKPLINEQMEFRILEFGGNNLSNSTLLLNSINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIKYSLNQIYQILTPNGNLIINEQQPNNENNENNEDSLKNLLVNCNFNSDIMMKSSSVSDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCNQDEQFQQQQQLINKFESHYNNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSITFEYVQINQKLYEFKSKCTHVLITYDSQSSNYLSSSILGAARYFDEIPTLQLFTFDFDKDSLINLDISVIDHLIDPKQNTLIEFFIKKNGKVYFERFKKGLKKNSFKSESYHQITNEQEILISKLDENLDYQLKSKDSILKPYDIEVEIKATGLNYKDYLVYSGLIKLKGDSVDFGLDFSGRVSRVGIKSSKEFKVGDEVYGIGQSTSSSHIIIDSMHACHKPSKITHVQAASIPAVYATSIHSLYNIGNLREGESILIHSGSGGVGLSALEILKSNNHSSPIFVTVGSEEKKQYLINTYGNLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDSNFKCLNPEGRIVDLTITHLNPNEFIDNNKFKYNFGYHNIELYYCEKPTIKKLLQSISKSIENNTLNYLIPITEFSNSNIKKAIEYINERKHVGKIVISHDTDITNKLIENQPKIDYSLLKSNYKIKNLGKNVLVTGQTGLILDIINWIMKYNSTVENIIILSKSSMKWEMEFLINNNKTKIKFYYKRCDIGGDSDSINKTFDKLFTENPTITNIDSIFHFAVVQITRKVKDIDMKSLNISHDAKTIGAINLHNQSIKRDWKLSNFILASSILSKVGSLDQCGYVSACCVLDSFSKYRLSIGLPALSINIGAMGGSGMVARSELVETVLNGQGYNLTSTNQLLGTIDLLIQNPGQESNNLMVGNFNFPVFNNFKQKIHQKFDFIFNALDSNSENGDGSNIKNSTNIKDKFLNKVSEFLSIDSSKINNDIKLMNYGADSLITVQLKNWVDKEWSPNLITIHQIQSNSIGMVCQIINDNFEKKK", "length": 2380 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU5-1", "protein_name": "Probable polyketide synthase 24", "gene_name": "pks24", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQNKINKAEILQVDDKHVEENLVAIVGVGFRLPSGSIENERNNTPQTLWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGINPNEAPTIDPIQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGCTESDYHNINKNEVKSNVFSSLNHAISNRISYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDSYFFKAYSSLNILSKSNGRCKSFDASADGYVRSECIGVVVLKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPTGDPIEVEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNKFKNTSMVVNNFGATGSNCCLVLSQFNYNTINNNINNHNNNHNHNHNHNNIKINNYLIPFSANSVESLKKYQSLIIENKEYESQYSFEEFVKNQIYNKSTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKCSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGSGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGTGYIDNIFKLYPNQDLTINSIEFKVPFVLTDGIGQCLQTNVYQTGKSEYRAQFHLKDEMNNQWINTSNSNFHLNSNDNYHEEKQKLDIQDIKQTKCNLSSIPWDEFYSLMKTQLGANFYGIFSKVVECYIGDNCSLTEISLELPENFHDEQSFFNCPLIDACFHGTVILYIQKNCKIVTDKVEGLRYYASNIPKNRDEHSSIFIYSTLKSSPSDDLLSSSIVVMLEDGTVIIEVDNLVVKSLTPVKDPLLIETPSDFIYTPYLQSKDSQIQSPLEFKSIYQNNQVDDGLLIPNVVIETIKPLINRKMEFRILEFGGNNLSKSTLLLNEINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIEYSLNQIYQILTPNGYLIINEQQQQQQQQQQQQQQQQQQQQQLLNNENNKESLKNLLVNCNFNSDIMIKSSSISDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCYQDEQLQQQQLINKFENHYNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSVTFEYVQINQKLYELKSKCTHVLITCDSQSSNYLSSSVLGAARYFDEIPTLQLFTLDFDKDSLTNDLDLFKTIDYLINPKNNIQREFYIKNSGTVYFEMYKKELKNLKNSYKSESYHDLSKQQDQLVSKLDEHFEYQLNSKQIDLEPYEIEVKVKATGINYKDYLKYNEMIKVNEAGIGFDFSGVVSRVGIKSSKEFKVGDQVYGIAYETSSSHIIIDSLLACHKPSKITHVQAASIPAVYSTSLYCLYDVGNLRDEESVLIHSGSGGVGLSGLEILKSNNHSSPIFVTVGSEEKKQYLINTYGDLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDTNFKCLNPKGRIVDLTTTHLNPNEFIDNSRYRYNIGYNSIEILKVGKSTIKKLLQSISKSIENETLNALIPITEFSNSNIKKSIESIKERKHVGKIVISHDTDIIDKLIEKESMIDYSILKSDYKIKNLGKNVLVTGQTGLILEVLKWITKYNSTVENIIILSKSSLKWELEFLMNYNNNNNNNNNNNKIKYHFKKCDISNWNLINKTIDQVLKDNPTITNIDSIFHFAALQINKKLKDIDMNSLNVSHSAKTFGAVNLHNLSIKRDWKIINFILASSVVSVLGSFDQCSYVSACCVVDSLSQYRKSIGLPSFTINIGGVSDRGYLSRHKLVEAVLGGQGVELISPNQLLGTLDLQIQNPNMPTNAFVNNFNWPLFKSFKQKLHQKFDFILNPINVDNSISMENDTNQSSSSTNVKNKFLNKVSELLSIDPSKINTNIKMINYGADSLITVQLKNWVDKEWSPHLITIQQIQSNSIGMVYQIINDSLDKKKKEMDEKLLPITAKTTTTTKNDPNDKTEYKYIAGGDCCREFSIKFHYSSVVNFII", "length": 2471 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LI2-1", "protein_name": "DNA replication licensing factor MCM2", "gene_name": "mcm2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSQNNNNNNNNNNNNNNNNNNKRKTKTPSSVNHNNTKINEDKDLYNFIDKIRDKTDKSHLEDEYDEDDNTKDGKFNKVEDEIKNDIDSEEDDDDIIEDNEHLYDGDEDSENLSSEGEGDDLLDEDLQDQDEEEVLGDEDNHYEMEGLDNETYEDIDKDKKTEVDSILTKRDREEQKTRQATNRHQYRISSFLLDENDENMVDEDTENNKLLEKRKANLIKKRRETIRQQNDNIKKDYDGSVPSFKDGFVNSERYFEDGDGDDDDDDDDFDIGDNGQVVNLEEPDKDKCLREYVCMSGPRNEISKQFAKFLLEFKEKDGFNPIYQESIQKMCAANKESLMINFTHLCASTVFGVWVAEIPTEMIEIFDEVALKVVLRIYPNYRNIVKSIHVRITHLPICESLRDIRQSNLNKLTKVGGVITRRSNVYPQLKHVKYDCVKCKTTLGPFSLDGTFNDSKPPIGLCPQCQSKGPFVMNSEQTVYRDFQKVTLQESPGTVPPGRLPRTKDIILMDDLIDTVRPGEEVEITGIYKHNFDLKLNYSQGFPVFSTIIEANHINKKEDLLSSFILTDEDEREIRKLSKDSNIAQKIIQSIAPSIYGHEDIKTGLALALFGGTPKDVNNKHRIRGDINVLLIGDPGVAKSQFLKYVEKTAHRAVYTTGQGASAVGLTAAVRMDPLTREWTLEGGALVLADRGVCMIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLTARCSVIAAANPKRGKYDSGLNLLQNVELTEPILSRFDIICVVKDTIDSFKDRELARFVVASHINSHPDNQNNPENDYLNRATKQSPISQELLRKYIIYAKRIKPRITDIDKNKISQLYTDLRRESRAGGFAMTVRHVESIVRMAEAHAKMHLRDYVTDFDVNTSIRVMLDSFINAQKNSMYKNLRTKFAPYVIFQKDINQLLTQLLQTLARDFSNYHFARSGDIPDQINIPYDDFDTKARELGISDITSFFRSNEFTSNNQFTLKKDKSTIIYYRNK", "length": 1008 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LX5-1", "protein_name": "U1-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKITESNNNNNNNKKDNNKHWCKYCKIFIQDNISVKNHEEGWRHKNNVTRFVSTQNRDKKYQERDQKEAEREINRIKNTGARSFREKDLSRVLDEKKHQQQPQQQPQQPQQQQRIFNNNSNNNNNNNNNNNNNNNNNNNNNNNSNNNNNYHQPQYPTTTTTTTTTNTTASNKNCDNADSKFKEIQEQQRQLLSNNDYYNYYQDRQQLIYDYYQNEGNQPIPEPPLNTSLYGYTESPLLKSRLDSSTDTLSSSSSSTIISPSHQKKRKQDDTNSPIPAKISKDECVNNENKDKSNEKENELNNNNNNNKSGEGEEGEESDDNDDDEEESGSGSESESESSEVDQSESIIGQWQTVDPIESAFGSTRKDSDDEKDKKDKKNKKDNDENKRDEKDYSDVSDADSEEESVNITKRAMANHKKPITLTNVISPTIPSTSKNFESVLSFNKSGVFSLNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEPPQPTPQITLKFNKPLKQRNTRKTNIEDKQS", "length": 514 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54M95-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLISILFFLFGILFFLKNVESASDVVCSFGYQACGNNCYSPSSGQKCYPGGVVCSFGYEACGNNCYSPSSGQKCNPGGVICSFGYQACGNSCYSPSSGQKCYPGGIICSFGYEACGRSCYSPSSGQKCYPGGVICSFGYQACGNTCYNPSAGQRCFN", "length": 158 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54N59-1", "protein_name": "G domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDLDYAIIVLRHHLESNGRFFEISKDDVKNRVTIKNKLTQEERYIDFGEIQNFIQYDEFEYNLLANGFQENLSILKNSILPLTKAPDSCSSNRGKTIGNSSLLINKVNGLIDDDKDTIYLLLIGITGVGKSTFVNMVVNYIEYSNLKDALENATLEQIYTIASKIEIQDENKTHKFSLGDVEDYKIGSSVTQYSRQYRIKLPDGKTLCLIDAPGVGDPQGTLQDNKHFENILHEISSLKKLNAICILMRPDETRATVLFKYCLNQLLLHLHSSAKDNIFFCFTHTRGTMYKPGPTRAILEDHLKKMKDQSDIEINANEKTFCFDNESFNYLAVKKYNATAGIETNFSEDDEFDFGRSWDRSSKEFKRLLEEISKVQPHDVANTICINNARTMISNLAQPMSTCISNINTNIKLMEQQSEKLRNNSIGDESLLYIPVSVVIAEKLENSLLVCTKNGCSSNTDNPCNIDVVSPKWYSSLYWCDNINKMGTCKKCSNTGVLPCLWFDHQVVTIKETPQLNQLPGTDKKTIGQRTKSEIFNERELLVTKMGERKIQFQEEYDTIKTAIVDFSVFLWHHSLIKFNRYYEDYINMQIKQLENSENSQELIQKLNEHLSEYKASVEEIKHNVQNNKASVKTQKEIFATFDKLLTLPNVGYIIQNQIKLKQSSHYKSEAVEIDLFSKMKNKTKQIIK", "length": 689 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ND5-1", "protein_name": "Multiple inositol polyphosphate phosphatase 1", "gene_name": "mipp1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MMVKIKNIIILFCIFGLLSNVSSLSSSSSSSQSSDNNGNLSPIQDYDLEFLSKHLTTKTPYWILTKNGDSNSQGDGSSGNSNSNSNSNSNSNSNSDSSNEPPEQCKLISIDFIARHGSRMPVLNSIEKLKEMTTSILEYKEQVNQGFNWIFNYSVPYPSDIAGNLILQGQYEHYNISKRLLKKYPLFFEPMKYKPQSYSITSTAISRTGISASAFSYGLLQGTGSLGVDGFQPVFIETASLDQDILLRFFATCNQYVDQLKNGTLINKDEQTKWNQMVFPNISNEISERLGLSDIWLPTSNVISDIFEACAYEISINNISDHWCSLLSKQNILDWEYSQDLSNYWLKSYGHEINYQIATPLLNDILSGFDIYINNNNNGSSSSSSSSSSNNGDNSGSNGSSGSGSSTSTSSNDNGSTNNNDNKVEPTSILRFGHAETIIPFISLLGLYKDEQKLFANSSTEQIENRKFRTSVVSPYASNIAMFLFDCGSAADGFKILVQHNELPVLVPGCDEIYCDYQQFKSIFKQGIDNFKWNSYCNINDDDSGSSGGDSGNGNGNDSHSKKSSYFLAIFIPITFLVGGTIGGIFTYFSYEKIMQVKNRKKLTQYGNDEFISSPKSKSFSFKPTKFDSRSPLIQ", "length": 635 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54NT2-1", "protein_name": "SH3 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKITTQFARTRQMLFTKTGHSEETIDVQYHYEKERTFSTEERLVKIQKNSKKLIELYKDLNKITTDIAQDACDLYDTQDPMWTPGSKLRDVATNNDKHLLDYTEQMAEPYTKPLSDYISQYKEARKRTEELTTRKVDMDRYKNEVGKLREKGAGSSSKAKLAPTEEKLRICKEGYDSLHEELLNDLPRLNEDKLIFIDYLVASLIKYQSEFHKKVSYEWSPLPSLTKHVDEYSGRDHQPVITSVERSAASINLRSDPVFKSNASIKMKPGAQDQQQYSTVDKDIHQSPNPSNLNLQKSTPNPYGGASAPPPLYGGGGSSTATALYDFTGVDSSELSFRAGDIITIHKSEGEWWEGELNGIYGFAPGSYLRMN", "length": 374 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54PW0-1", "protein_name": "Annexin I", "gene_name": "nxnB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEYKEKEINTSSPSSPSKTQISNIENDSISEKAQEPISEKVQDPISEKAQESISEKEHIESNNVSEIIDLIKSGDQHLNNNNNNNNNNNNNNNNNNNEEENQEINYNDNQLSNEEIVEDVKNSNINNNNTIEKGNSSQNNNKNNNNNYHTEKCDYCLICKCYDYGEITHNIVEDSEILKQSIRYSYVDDTSINSILAHRNYAEKEAIMKKFNDKYNKSLETELASHTHQKYRRTLISILTEPSIYDTLNIENSIKTKNSNTLLEILLTRTNEQKELIKRIYLVKYGKNIEHDIIAKFSNGANVNGNMMKQLLISMLNNDRDSNSNQSLDMNLINTDSNRLYQAGEHKKGTDHEVFIEILSKRSFSHLSELDRVYENSNPKGHSLRKAIELEFGVSKSIKQVKISLLDILLFSKEPSKYWAEQFNRALTSGSWGINEIDLTRLTITQQHQASKIKQAYISHYDNSLINEVSSKTSFRYKKIILSMLTV", "length": 487 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QB4-1", "protein_name": "Kinetochore protein Ndc80", "gene_name": "ndc80", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MHNNNLTYQQYQQQQLLIQQQQQQLLYQQQLLQQQQQQQQQQQQQKQYSHGRPSTLGLPSRKPPPMQPQPQPQIQAPIQLTFQQQQQLLQQQQYQFNNNLNTINNNNNNNITNRHSMVTPSTNLGGRSSLGPPSAMLTNNNNNNSNIRNTTFISNSGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNNNNNIHTQVQPKKSIAPSKSNTISSNTTTTTTAASSSSSSNPSITLRQETRPVNDSKFQSQCLLRLQQFLSQSEKGYPRAITKDNLMSEINGLMKFLCLHIDPHFKLPTEKPEEEIISFFKMMGYRSAGFTKRVFSQVGNAHTRGHLLGAIIWMVELIEYDQIIRQMDSHIEREILNGNTIDENGNLTTTTSATNTNEDGNFNLTTQIFSKHVFKSYEAFLKGDDGNHVDQFLEEKFNEVNELIVKECEESMERQKKIKQEIVNLTQYITNDDIDQLNFKLEQTNQEIIATHDLINDNELEDQKLDQEIDQNQTHFQELEIQQKEHQKKKQEFESRIQIQQSNSVDAKRINQETFELKEELDKVQREQSRHDQLKQEKSKEIKQSINEIEKLIQSYKEICCKASLVTNDNLIIEKYRIIFTHTLNNNNNNNNTNNSSILNISNNIINNNNNNNNNNNNNYEEGIISISDLKLVIKNLQELNLEISQNISKIKQDLLKTSNLNDIQKESISDKELELARIKQKHDKQKNILKQEKQDQTFDITQREENIEQLKSSNKKLIDDGVRELEKTIQLLESQREEHSRLKIDLKQSSEQMKLQYLKRIERFISHRQLIGSQIFDTLRQMEELSLTQKILFPPPPPPPQLSQQHQQLMQQQHQNNTIDIDE", "length": 855 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QD2-1", "protein_name": "Probable cytochrome P450 517A1", "gene_name": "cyp517A1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIINVFLFLIILFLVKDFVKKNKKIHTKSPSGPIAFPILGNVVQIRFWELFKIQEHELFGGYSKKYNGVVRAWFGERLFFFVSNYDVVKYFQKDENFHNRPSVLVPGWRYASSNGLGVMSSSDDKWKRAKSSVSQSLRVRTTKKLMEEKAIEFIDSLEKISNNNEIFYPKGHIQGYACSMLFKYMFNQDLSVESGMSRTIGNAVEHVFGNLSKLTAFDCFEIFSPLYDWFFTRRLKGCDIVRQIISSQNENHLKSIDPSKPRDLMDDLLIEYGLNEITKEDTMQINQICFDIFGPAVGTVTITMNWVILQLCNRPELQEIAYQEIKKAVKDDEYVNLNHKQNAPYIVAFIKETMRLCSNGFGLPRTAKNDQICGDFFIPKDAIIFINYLEISQNEEIFKNAKEFNPTRYLDESLPVPNIHFGVGQRACPGRFVAIDKMFLGISNLLLKYKLKTQNGEKIDDSIQFSVSLKAKDYGIKLEKRI", "length": 483 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RM4-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKVILIYFIVIYLINISFSLKPYQQQQQLHNFNIIENNNNNNRNEKVIIAHPKIPPYWLIENEISNPNDLISFKILLKQNNLNKLNYLFEEISDPKSKIYGEFLSINEINELVKSSESDFNVVLEYLKSFNIGNIENGSEIKVFSDYILVETTIEKVSSMFNSKFSNYKNKNNGNTRNRLNGPAYLPKQLLNSIDFVTGLSEFFENNFKIENYLNNNNKNNGDSDSDSGSGSGSGSSNSYNGGLDDILITPKVLKSYYNVPNELIGKFENNSIGVIAFNDYFSMGALELFDEKFNITTTKDNLKIIGNDCLGKGCDQYESDLDIQYIRSMGENISTDFISFNDAQWILDYLHSVLLMEKPPLVQSISYGWAELLQCDVSNGCSTFGYDSKQYVDRTNSEFQKLALLGISVLVSSGDDGAPSMGGSSGNCPIDGTVYCPTGGCNHTKTMCPEFTIYNLNGGSDSGGSSDSYCFFPMGIASSGCTNILGDPSVLDSGMKIFSEKNKQCNLAIEYDRTNLPHVYSECECKDLVNVTFRNYHFTQYQFNENNGALFVAEYPSSSPFVTSVGATQFLSRDEKITTEVGCTILQGAKITTGGGFSSFQSQPKYQQYAISQFFNTSFNSLPPSFSYCPTNRGVPDISMVGHNYKIYSSDGNNKDFNQCPCKSLPVDGTSCSSPTLAGLIGLINDQLLLNGKTQLGFLNPLLYQMAIDEPRIFNDITGDSSNRCSRSYCCLYGWSTSSNTWDPVTGLGSIDFNLFLSYVLKLKGI", "length": 767 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RX1-1", "protein_name": "Translationally-controlled tumor protein homolog 2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLYKDLIGNSHDDLLTDRYEIKVGDVTFEVKTKMITKDLNVVVNNNSLGGSISTTVDNNNSITLSTNLEDEFENVEAAGTFQINNLVEQLRLVETSFDKKSYLAYMKLYIKDLINHIKQQPSNSDNEKIEHIQKGIQSFVKTMMDGENFKKYSFFTGSSMDANGLVALMYYKDDDPTTPTFVFIKYGLLQVDV", "length": 194 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S19-1", "protein_name": "PHD zinc finger-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKNCIVCSKVGQYPLNLVKCYECKSYYHKFCLQSTKIPRGEWYCSSCEIERKNKKNKKRKLDGAGKKNKKNNKDDDDDNDDDDDEGENDEDDEDHQDEDSGEEEDEEEDEEEEDDDDEEEEEGNEKNKIKKRKRIPINQSPSIKKRTKDIDSEEEEEEEEEEEENDSEEERRIQKRKNKIKQQQQLKMKEKKQREKLRKRRRRTRSSRKDDNDQDDDDDDDDNNSNNSDDNDQDENKNKQKRKRRKDKKKDDDDDDDQEEEEEEEEEIVTGKRKRRSLNKVQPNQHLNNENEEDNEEEEEEEEEEEEEEETDSSEEFLENLVCSSCNTGKDEDKILLCDTDNCSRGYHMYCLRYPITSVPKGDWICDFCRFGDISADLHSADDDEDGAINSQKEIEKQKQKQKEKEKEREREREREKEKEKERERERERREKEKKDALRSSFSNIPIPKINNINGSNGSNSNNNNNSNNNGSGVNRQSPPKVISKKSPQQSPKPLKSPTSSSSSTTSSPPPLHQQSKVTSKISPNSQQSIPTINSNINKSPPSQSKNSPPLKPLTPDLKKQIPITNITTSSTTTTATTTTTTTTTANTSNVATTTTLLKPSSQKKPTILSDKKQLNTSGTNLPMNGKKKEDLESSASHSILDMIPPNNKLFNNSIQSAPISWDLSGSQHKLSTSSSSLPNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIKLQQQLQQQQQQLHQQLQQQQLQQQQQQLHQQLQQQKLKQKQIEEEQEKEREQKRLENEQKLLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEFIDQKELEDKLLSQFDNQNLKSPLSLTSTTSSTLSHLPQSTFESSTILSNKTIKQKWKSRILFETDQICQCEIIQIYGMDFKVNPFQNNITSKTLELSFNQVSFDNLPKPIRDEFITKSSTPSTCLDIGAIDLPNSALLIFLPEIPNQSSLYHLIIHFIENRVAGFIDLSNDLSLYIYPYQTSIISLDLIGILIDKKSLSPPSLILNQQQKQQKQQQQEQEQQNQSFDIKNICYIGINHISMNKILTSQGKNYFSFSNFNELTLSSDIKNFDLVVVDNKMVNNQTINKEINNLMQLQPTTNNNNNNNDINNNHDTLLLVIKDVEFSKWLVSQKKFPNSLEIQKIFQQQILFKQSRCIFLLDNSIIIENESSYFVEFISSFGKFKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNDWTIKISSTIFDELLPFGHQSNVKKKIDEIKRGINQQLIVSYDFSPMVPKQSSDFLLLALRIAHSKKYKQVFLITSNKIIQNQSKRYSNLNLNCLSLEGGIDYIKNINNKFSLKI", "length": 1361 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S56-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDLFSHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVGECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54SW0-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "NQAKSSTIQQPTQTQQSNINNNTAKPRAAPPLKLVITNSNPSLKQKPQSQQTIPQQSVPQQSIPQQTIQQSVPQQQPNQSQQVNVNRTINPQQQQQQQQQQQQQQQQQNINRTAPLPQQSNYKPQPGVIYQQQQQTQYRVGTPLTINRSPMVGMVSKQPMSSSQQQSQSQQNIQRVPCQGKCCAGLAVKPLVPINSITAKPPPYSTMGPRGPISGGFVRTSPTGAIIGPSPQQQTMSRAMVNSMPIQPQIQIKPKPSPLNNGGIPITTTTTTTTNPLNKSSPSTLTQSSNTLASSNNNITTSNSLSSSTSSLPTTSTTPTTKPKSKPRSKSNSNSQTSSSTTSSSSTPSTPTTNSTKNKENTTPNKGDDSGTDNEKSSLSNSSKLLPTAYTMDQVLPFNPNQMFLGPEDKYIKSATRTYHKIPTNPSVMSNNRGAEIPSSLEYILDIPIIHDEPSSKNNPTWGRLILDALRRLVANKKTTRITERLKLDNMYKDMDSRSNQDKLDWKNGLVNEAQLNYLLSFLSNTIPFPDTPEKNKNKYLSSSDSQIINSNDQSNSLNSNNSSNNSTTNNNNSSTTTNSTNNIINNNNNNNTSSVPNSTNNSNNSSPEQQDVIDMELKLEPDNSMNFPIEINMDSLGSYIDDSFTFDNSSYDDTATISSDDKNLPITTVMPPTTSTTSTPQTITNTIPTTTPTIISPPTITTTTTTTKTTSPPTITTTTSPPTITTTTSPPTITTTTTTINSITPTTSTSSTINSNTTPMLDIVIDPVISLELLDENHQQQQNKEVKEENVHSKQQPPQQQQQQQQQQQQQQQQQQQQQQQQQQQQEDFMIQVQTSDLETQTQIQQDKEEIQVKPIVDSKKSGNSPTQIQQQQQHQQQQHHHQHNTLTQGFEFGMMMDIMNSPSSTSSMKRKRDDVDQPINQINNSSMVVQQNNDFFSDFNTIEAPFSSSHHSSQLSFQTPFSPDIVIDSDFQNKKRIVS", "length": 981 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54T36-1", "protein_name": "Probable polyketide synthase 19", "gene_name": "pks19", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFGNKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSITMGFQSIQNGTSNLSIVGGASLLLDPYVSKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSTTSTPSKPLLIGSLKSNIGHCEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNINEKPVSMVINNFGVTGSNCCLILSQFIEHSISLNGNNPSYPIESQQQIFLIPFSANSVKSLKNYEDLIINDNNLSTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTSNDKSSNITIKRNQPLIVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLDLKENNIFCAFLGSLSSFHTSSQNSTKNEILPLEIPSRQSTIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDINFKCQFNHNDDDVNSIRNNSTIILPNYQFDEQYYWKVDINFEQYRLNGPNVFNNLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNKDIVINNLEFLAPFVLKENVKHILQTNVYQLGNTDYRVTFNIKDNKANQWVQTCTGNFQLISLKDNNNNNNNNHSSKYNINQLLSECNFTTLSKQEVYKYSKLRSGITHLGTFQGIEEFHFGNDLTIARIQINYENFDINGKPVYQTFDKSFFNIALLDNCIQAITGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLEADSYKSSVLVLLEDGTKLLEIEHISFRSTLPLIDELLLNNPTNELFTNNLQCKDSLVNILSIDNNETSSSSGSSNTVTEIIKQTIKPIINEKIVFRILQSFSDSELSKQIIEALNQIFDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDETIIKPIFNILSSNGLLLLIIEDDIGIRFNINNLIGVGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKHSKYTNEFKKLISNNHTNRKQTTISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGASRYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNEIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISDENKNCEFKVGDNVFGVSHDATASHVITDVLYVSHKPNNISHIEAASLPIIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIEFMHINKRVVSRLLKSISNALNENKVKLIPITTFQIENVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKIVDVGDSIEMRKSINQILLENPNIDNIDSIFHYAFTQVTKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCTYVSANLVLDSLSRYRKSIGLPSTCTNWGTIKSSGFVSRNDSVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKYSNLIVSKFNYDSIKKFASETSTFQRLDFILNSIKEKDNDNNGGENISISESIQMKFLNKISELLSIEQSKINTDIRLGEYGADSLTSVQLKNFIDKENKSNVITLQQLQNNTIGVNIQIILEQIKKLDSNETKGKSKKIIKKDSAPSLEYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKVKVIVGNLASPLLGLSKLDFGFVSNQINLIINSGADINLASNYEESKVVNIGGLIELIKLSTTGDYQKPIVGFSSISVFFESPNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLFREAAKRGIPSMLIRLPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPNIDKNILTSPIGWIGLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSSIKSSFSFLEKQYGCEMVEYEQWKNIINQSKILSCIKFKTFHSLDRLNGVYNLGHGFGVSKKTKELLQSMNSYEGGMVNEKIIQNHINYIFKN", "length": 2778 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TD0-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "V4-7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISKTSLLLLLLSIVALASAISVQRVPIADVTSAPAHFVQNKLAKSYELVQFKILLKQRNLDILEEKFWDVSSPKSENYGKFLSKEEIDSIVAPSPKDVKVVVNWLIDNGLSKNEMIVHSDFIQVRTNVGKASTLFETSFAHYSSSRTALKRIRVVGQASMPMHVLAKVDLVLGLSDFIEDNKMSESMRATKKQVQGSTVSITPAVIKQYYGIPTGQIGVESENFQSIAAFSDFYSSGALQFFDQKFGIDSSTVRVKNVGQNCIAQNCDQMESDLDVQYMTAIGNNITTLFLSSGNGEWIIDWATAIQQYNPIPKIASISYGWAEVEQCEITNSCSTLGIDSVVYVARSNVELQKVGLRGVSVFVSSGDDGAPSFGAASGNCPIDGTKQYCPLGGCNHKSSQCPMITIMESNGTQCFFPMGSESNTCQSMLQNQNIVNGINEFVSSNSKCQVALEQDTQQNYHIYSSCTCDKLKPYSDSDAGFKIVGYSYDQDAGTLFQPDYPASSPFITSVGATQITDVTKPEIVCSVATGAIITGGGGVAITQAQPSYQADAVATYIKSGTLPPSYSYNATNRFYPDLTLVGHAYEIAVPNTLTSNTCPCALESVDGTSCSSPTLAGMISLINDKLIGAGKPTLGFLNPLLYQAAKEQPNVFNDITTGANNCNRAYCCQYGYTATTGYDAASGLGSINFKNFEQYVLSLN", "length": 702 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TX3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLIYAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYFKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKAHTSTLNDMCRHWGVFRVKFYQNHPKINELPDCIRNDNDEPLKLKEIYELMIKDRHPTPRRTEWQKLWAVRYNTAIPKVFININSISHQKGRNTLFRFFSRSLPGINHERDTRCKICGHLFRDPYSHLFTLCQDILDIEKTIISTVNKLSFIKIHRWSMDTLDISKYNRTERIFPNLIGIIAHQLWKIICHKLFNTDESKPEPKFEQKVIETELLNLIETEKFITLKKIKHDEAILKNTNQDLHKYKFNKAWQTPAAPNPLPI", "length": 1097 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54U20-1", "protein_name": "Peptidase S54 rhomboid domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIYGDTREFRNIHFHLNNIRIVGAIFGQDGFIHKKIPLATKVISIICSILFALSLVAPSMFGSYKTCLSIESLTNSFLDNLYRIILSNFAHLSIYHIVYNMITFLDLAKLERLTFGTLKYFYLLFLFGIITNLICLFIYFIGRNNVCHLGFSGVLFALIYIESNSSGRDVFLFNAVKIPSKLYPWAMLILAHVFVPRSSFIGHFSGIVVGILFIKGYLDIFILSNQKLSEIESSQLMNIFTTKNSYFPIIKFGGSRRSYNTDRKSLDGLFFELKNLFNPQQQQQRQQQRQQQQPQSPQPQQPQQPQQQPQQQPQQQPQQHQRDNFRNDNNDNSNNYDEYDFSK", "length": 343 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VC1-1", "protein_name": "ABC transporter C family member 15", "gene_name": "abcC15", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKKIKNIINKIINFFSTIYILCKIYLYYNIKNRYEAYNILSVYGDDDFFNKPCPEDSSNWKDKLTFKWVERIIFVGFFRAPLNLNDISDLPSSLKVENTAPLLKDIIFNDSTIPLIKHIYSKFLPRNYIATGLFVFVSVFSFITPLILKNFLSYVEKIDEQKHIYIGIIQCFLLFLSSFINMASQQYSYWFGFKTSLEVKGALETIIFEKMTKLSNLSKKNYNIGSMLNLMSVDTDFFQYFFCHYYIEIFLFPIQILSLLGFLIYVIGIAGFVGFLVMLITIPLSSFLGTQISKNLSTSMGYADTRISLTGELINGIKFLKQYAWEKMFCERIEEQRKLQLKYLYIRIIYWVLVQIVTQASSGLVLVSTFTTYTLLGYEVSLEIAFTSITILQNLRRPIESLPDCLHKFISLIASAKRIETFLQSSELQNQPFIHNQSGLNDILIRNINFNWNEHNLKLKNNKNNQNNNQNKRSIILSSGEQFEITNDFTFDGIDIQDDNYDYEKEYKINYNNNEEEENFMTDCLLKIKPLIKDRRLQQQQADYQDLLSINLPPPPSENVDFKAPKGLLTIISGGVRSGKTSLASGLLGEICKAVDKSSPDSVNSILSTIQQPFLQSTSFRENILFGKPMNMERYIKVIEACCLAPDLLAMGEGKDLTEIGERGINLSNGLKHRIQLARALYADSDCYILDEILSSVDPEIANYIFQHCIKGMMKGKTVILVTHQIQFISSADHVVVVDNGVLIQGTYLELLRMGIDFEMILKEKENRIEKQIVQLQEDEDYYEEVEILDFTMNNNNNNNNNNNNNNSNFNGNNKLKRSSISLPKGISIESIISKDFDQTTIEKAKLFVQEDRNKGDPGWIIYKKYIRMGSSISFFIFTCIIYLTSQIILLLSDYWLQSWASHDRLNVSEPTDVHYLLIYLAYIGGFVFTLGVRYLLIAKITFGSAETLHRSLLKSIIRAPLTFFEQNPVGRILNRFGKDISDIDILLLDCFSDVLYCGACLVTSIGIIIYISPYIAIPFVILIAINYIFQLFYNYSVLELKRIQSISRSPVYSLLSEVYNGLTTIRSFGQQERFFNMMKDNININLRVFFYNFAVSRWIGIRVEFLSAIVVLMSALFSIFNDNPGLSALGVTTALGITFNLNWFMRQFGELESRINSVERVQSYISIPKEKETNEDEFIQTGFIWPSRGEIEFKNVEIRYRPNSIATLRNFSMKINAQERIGIIGRSGSGKSTIGMSLFRMIECSSGSILIDGDDISQIDLKRLRSSIGIVPQDPFIFSGSIRLNLDPFDQFTDNEIWEALSKVKLKKMVSTMPMKLESLVQGGDGLTIGNKQLLCLCRAILRNSKIVLFDEATNSIDFQTTRLIKQTIEENFKDCTILTIAHNIDTILDSDKIAIIDEGELIEFDTPLNLIKDSTSRFSKLIKLNNNQKNKLN", "length": 1436 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VG9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSIIILSFILSIISFSNGTIVKCTSASCSSLNNNCVNHYCNPRAGCYGIDKCVRIDACHIVSCDLNNGSCINTKANCDDGDPCTDDFCHNGYGCFSLPNNKHPSVICQKNCNDNNPCTDDFCDFTNTCQHTLKNCEDNDFCTIDSCGPNGCVHTNISCDDNDPCTSDFCSIMYGCYHEQIECSIKVPCSTDIECNRYNLCETYTCDLISNICKYSTKFCNGFPCINNECMTGVIYN", "length": 237 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WA9-1", "protein_name": "Short-chain dehydrogenase/reductase family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKKNIFFITGCSGIGFGGLMVKKLLSRGDYVAATSRNKNKLIQDIGSNENDQFLPIEMNLADESNVKEAIEKCIEKFGRIDILISNAAMGILAPLEETTDKDARTLFDINFFGPLNLIRNSLPYLRNNQFLKNNNDNNNSKLNGPRIIIIDSICGYSSLFNGCSIYCSSKFALHAISETMSIELKPFNIHCCNIAPGYFQTSFLSSCLIPDTRIAEYKDTHSFLDEIVKLNGSRFLGDLSKAVDVIIEISLSYSPPNHVLVGSDAFELFDLKYKKLTNDILINKEICSNTDKN", "length": 295 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WC3-1", "protein_name": "Cln5-like protein 2", "gene_name": "cln5lb", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNKLIFIIICLGIVDKTISSDFKSYNDGIYSFTYDNICSFKNSIRDQDVYELYYVQAPLLYATYGNLLEKINAYHSGIVLYNKNNGPNITIDYYAIPSFEATLFPKSIIKDSQGNYNITWDTHGLIEVTNYINETYWNKRQLIMYDLSGIQIKQYLSWAPIYNKTHTFYNLFNIESDLSISNSSKIYKNSSTCDDFVWASFDVLYKLGGTIASVQSDPQRDDIKLFISSGEPKIVDYNDSIKRNQIASFFNELKDFANLGKNKTALEIFNELITFFNGYFYCYIDGEYYEMKLSKQNPISFTYLPSPIPIGKRNFNEIKKLGFCK", "length": 325 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WW7-1", "protein_name": "Probable serine/threonine-protein kinase DDB_G0279405", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGCIFTKPSPEQQKFDGEDYECENKKNLNLISYIRNLLFGNNSHQQLYNEIIPTTTSTTSTTTNSVYQNIGLDGYNNNNNNNNNNNNNNNIMNNYGYDDYGYSYEEDEDYYDEMPIPTIVAQPQPQPQPQPQPQPQPQQPIRIVSQNQQIPTTPPQQISQFNITGNKSPSSIGSRHRSKPKETLRAHKKRHKDGHKMVNEYVFVRKLGKGTFGKVKLAYHHDTHHLYAIKIFNKIRLKKQTMGIGRPNAFDDVLKEIAIMKKMNHINVVKLYEVINDPQEEYIYIVMEYIEGGSIMSANETSEDLARKYFRDIVFGLEYLHEQKVIHKDLKPENLLVNSEGVVKITDFGVSHIFDDDDVVRCSRGSPAFLAPELCRNESQPISGKGVDVWALGVSLYCLIFARTPFISKTNSLLDIYDQIVNHEPTYPREISNDLMDLFKRLLDKNPLTRIQIAEIKSHKWTTISGTWPMNELDHLILSVTDQEMIDAISTDHTIKPSDNTTTDEDDSDLSSSSGGESSGIIGSSNESKSMYNNVNSKQKIQNQNQNQNQNQNQNQNQNQNQNHNQNQNQNQNQNNNNNSLIEKSNISIPASSSSISNNDSCYENRNVYIKDEEMNMICNDSVIMDPIKELNKIDGLNYGCDFQIGKEYSDFQYNSGHFIYDLVDENESQISRESANDYYLPFKTNKYLNNKSIV", "length": 695 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WX7-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MARTDNVQLPLENTSIEFEEEIIDSQNDISQQKNYQDFLKNIPTDLNERKEYISSLKKLIKLEKRNHQQIQGEQPNQQEGLNSDRPPPNHHGDHHHSLPPPNHHGDHHHHSQPPPNHHGDHHHHSPPPPHHHGGHHHCPPPHHGGHHHCPPPPPHHHGGHHHHCPPPPHHHGGHHHHCPPPPPPHHHSHHHHCPPPPPPHHHGGHHHHTPPHPPPHHHGGHHHHCPPSPHHHGGHHHHSPPPPPPHHHGGHHHHCPPPPHDGNEYLPQSQTNIEQCICRLNRKKELLIAKIQSIDSIIYNLECLNKQNYQNNYLPSIQLQPTQQPQQPQQTSIKPQQMCQQFFIPQTPNFPQMNNSAPLMYVSQIPVQQSFNNN", "length": 374 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54Y59-1", "protein_name": "Small GTPase", "gene_name": "rsmH", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNIFLSKSKDVYRVTSHKKEVKICVLGDANVGKTNFINQFTKSSFNEEYTPTIESRQNKLYKFNRKQFQIQIYDTAGSKELNLFVSDSISQCEGFIIVFSLNDRNSILKIQHYKTLIKNIFKDVEMPIVLVGTKMDLKKEITISKNECKITSVNNNIPNLFYTSAKNKESIIPVFKKLVDLIISKEKKVKKETESNNIKINNQNKIKKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHVFKTRSNSTLRMKKYLKLF", "length": 272 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YJ4-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKVYQDEEFSFFEIGGKKIADLYVRDIITEIRKRGKEITGLGLKSKYELLCILVNRMKEENPSLNIPPKKRVLDFGSLSSTTSNGILQDSNKFFKKDNTHQHQQQQQQQQQQQQQQQQQQQQQQQQHSNNSDDDDDTHNYNDDSDESDDEYIITEEEEIELHKNLNLGDDENLLTLEIKLLESQLENKKFRKSLLLKDKKIKHLENIIQQQQQQLLEQQHQQQQQQQQQQQQQQQQQQRQEEEQQKEQQQKEEQEQEQSSLKNNLKFKDGANLFSIESISNLYNKILNEFNFKKIITEFGDSSLKIHEEFVKFIILKSINLNHNNNKNNNKNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNNLPNGDVNKNNNNNGEIIELVPPPKIDEFWKLMVLDTVGYQQFSNILGAKVNYDTDINPTRKGYQRLKDMKNLYFPPPPSTTELTTDEIWPNHYLLPIQPSPQKQHIQKQQLPSSSSSSSSSSSSSSSSQQHQQHQPQHKQQHQLQQIQEQQPQQQQHQQQQHQQPLQQQIQQQQQQQQQHQPQQQHQPQQQQQQQQPQQQQQQQQQQQQQQQQQQQQQQQQKKQQQQHQQQKNKENNKENNKENNKQNNKENNKLNDNNLNIEVHEDEGNRIINFLISPDTPLRNLFVAYAKEIGENFNSFKFYFGNELLCQNETPSQLLMRNGTKIQAFYLNKKEIKK", "length": 702 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YV1-1", "protein_name": "Rho GTPase-activating protein gacII", "gene_name": "gacII", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVRKLFNTSHKKELILDVDTTIVKIGTPKNVVLLTKWLDANGAIKEEGVFRVNGNTTTMEQIKKNFSQGKDDLTKYTSADIHSMAGCLKFILRELPEPIFTWDFYPIFIKIQCLQDESRKLFFLKMLIHGLPYTSRTLVFQLFGFLSKFSVHQDQNKMTPKNLATVFAPNVLRPKKEEDNFQLMNNQDSIGVIETLIEEFQYISNIQKNTLNSQEIKVKSVLPFDETTNAITQQSLVEDYLIAKANTPQESSSFKKNLPFKKGDIIKLLYIKNDGNFIGEINGITGNLSQTYVDIIDISELAEAFTLTPPPIPTLPIASTILHTPPTSSSSSSSSSSSSILLTDNQPKLCSSTPRINNSPSSFSPSLSSTTPQLLVQQSPRQSPRQIPSISLIVEPNNTNQPSFGHGTLQRTSTGYFSSKPLSISQPINMSKPTNMSPPTHHAMSMHNLPPSNTTRENHLPPLPTKPPPLTIPSSSSLPTTPIKQQPQQPIQQPLTPQNHHHHHHHNNLSSSVNTANTGNCANILSPNSDRYLSSRSQSSVHLSGSSSSSSSSSSSSSSSSSSSSSTSNRKFDFSLKSKSSKNSPSKNLPPQPTTTSTLTPPPPPTITTTTTTTTTTTTTTIATTPPPPSKPLPNIPVKDQQFNTLKRSTIEIPPPTITSTNINNNNNTINPRTLNYSFSSFSITYNNSQLGGQLSQEEPPGGVKSQSSYLDNNNLPSRNTNIPNLPPRPPPLNIPQQQQQYKPLPSPPQLQSPQSSLNQSLQIPLQQQQQVQQQKLTTHYILPPQNTNLSGKNLQRSSTSMLLNKLPPPPFSFNKN", "length": 817 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA1-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNLNITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSGSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA6-1", "protein_name": "Alpha/beta hydrolase fold-1 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKINQTPKKHKIIEPNRKGYSIVGKNTGKPNKIYFETFGNGPKKILFITGFLSSSKGWCKQIDYFTNKKDQYEICVFDNRGIGKSNIDSKYSYNFSTKSMAMDAIDLLEDTLKWDKVHICGLSMGGMASIHLSSIIPEKVQSLVIACVPNGYFLPFFSMGVFNYIRAFFFTFNEKKKARIFQSLMYSDNYLDEKTNGSDETRSEQMFKKNSTGFKDDGPSFLTILGHQIGYITNRFSKKSLEVIKKYSIPTIVINSKKDSLVTIDITKKQIVNPLKPLNFHVIEGGHLSQLENPTFFNKLVENHVDKHSNWDHSTFFQVEKQQFQRQSFMTQNILYSKNYLSSNTLSSSFLNCNTLRSFFNKIKV", "length": 366 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZT3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551H6-1", "protein_name": "t-SNARE coiled-coil homology domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MATRDITSSYILSRTECKNRAKIINSAININIKKSGSGYKRLEEENYQDIDIDNNNNNNNINNNNINNNDNDNDTTNNIKNSNNNNDIQLNILDTEINIEQLNSLPPWILKLNDIDENIKKIISLIEKFKKYLKEDIDKILAEDIEMESRIDCERSIELLTMETIRLFHKTFDMIKYLNKSNNSSQGENKMKKNTQRMKSAKLKALLITFKHIQRSYLALLKKVSSLQRSLSSSFLYRSGEYDVNNDNEDYGENSSISNSHYLQHHHNNNHHHEDDHDHEEDHEEIMDELNEMATTLIERQRVSQLIKETSHLIQDVGSMCVKKDSIFDRIDYNLAEGEELEFNGTILICDGITNGYERPENEKRKKLLLIFAVLIIVILFIFILKYVIEI", "length": 391 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551V5-1", "protein_name": "EGF-like domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKYLFRFFIFLFCITRINSQTGCFFRETGADYNIDSVFSVFYVDNLFNIFGMTFYMKTCTYVTCDPWRQTMICGNYNSTTFQLGPYQSQKVTLNKNGISIEYLSDKTPPNHPCPTITTTVKFICDKSVLSVPKSDYDYVGTCGVQIKLFAIDYCQTCSKCIASHGSCNSTSGWCTCDSYTMGLNCDQLKASISSVVAPTIDGGSVIISGDFSSIYSLGPSLVITIGSLVCSQVSFAASTTQISCTIGAGQGYQNLTISDGSGSTLQYKQFYYHYPCQEDCTPYGTCNDVIGKCTCNYKYSIGADCKTLNLQLTSVKPTLLDGGQAYLVGDFSNVTGLTLSVKIGIKECTDVNFNETTLQCTIGSGEGIKDIIITSDLLTYSKIGAYEYQYYTCPLGCLHGTCNKYNGLCVCNNGTYGDQCQYIECPLDCSTPNGVCDKDTGICDCDDKYSGEGCDFIKCPLDCSTPNGVCDGKTGICNCDEKHSGDSCQFLQCPLNCSNPNGICNRNTGICSCDSKYSGEGCDFIKCPTDCSTPNGTCDGKTGTCKCNNPYTGENCDEIAKCKQECSLKHGTCDSHTLDCICDTQTKGLSCEESRLLIESADPTSLDGGTTTITGYFGTTTSLLSIKIGDSQCTNIKVESDTKLKCDIGPGEGTHNVTVTDDDLSFTGVGMFQYVGQINKISKISGGAIAGIAAGCVVGVSVLGAGGYYQYRKNKKIELFMS", "length": 722 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q554Y8-1", "protein_name": "ADP-ribosylation factor-related", "gene_name": "arrB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGMGFSFIEKKDFKRFLILGIDNSGKKKIMYRLKFNKDIPTRPEKGFFVETFERRFKYNNEDVCGQNMIRPLWPNYYTDETNGLIFVVDSSDQERIEEVRLEIKKLDENIKIFKNHPFLIFANKQDLKNSLSIEQLIDKLELNKLSLNRKWHIQSSNAITGDGLEFGLNWLFSSSHNFT", "length": 179 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555E8-1", "protein_name": "Putative fatty acid elongase DDB_G0274669", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METVQSIITEWTDPKSWEKLVQHSFKDSNWKELIDPVNYKFNFGVTPFSQFQIIPIVLVIYLVTIFSIKFLMKNRKPFSLKFISILHNAILCIWSLIMCVGVLYEIIKRVSNEGPLFTVCEDPNGGFDKGVTYYWSYIFYISKFYELLDTVIIVLKKKPLIFLHVYHHCKTVWWKKYITMIQILQFVCLGIAGVLHVYTINTIGCFTHYPAFAAAYSINFSFLFLFSKFFVKSYTPKNSNSNTNIKSKKID", "length": 251 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555Q5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MRSIRIKKINFHIKQGEEQLKQELNNYCEETSLKYISARIKKRHNDFTINAVKDAQGRTINKQELIEEEYVKYYSNLYDYKEDDAPSHYEMLENWTVTRDSTWDNLENEFTTQEILEVIKQLNPHKSPGPDGIPNLFYITHKEKLAPILASAFNDTLRNPHLISKNYKEGLIITIPKKGDPELIKNRRPITLANCIYKIHSKLINNRIIPILTKVINHNQKGFVPGRFIIDNIISMNELINYCNDKRINGIITLYDFEKAFDSISHGSILRSLQHINIPTNIINLIMNLLTKSEARIEINGRTTIPFEIKRGVKQGDPLSPTLFVLVIEALARKILQDDRITGLPLNNSDHREKFQSFADDSASMVPDSQQLELVLQHFNSFCKATSSKLNIDKSSSILIGNPDNTNQRIPISTNPERYLGYFFTGKGITRKIPEILNTIRSSLVLWKTTDSTIKTKTNILKAFALSKLTYYSYVENFKEEELNQINKLVEWFLSAPNTKMLVDFKITPKLSPTAKKDQEVNADYANHRFHKEYFEWNYKAIDYDLTRSFAYRNLMALILHNIWIWICNQIYSEDPLTDESLSYSSLLKKWHKLATLEYIKKAKDLKNLSAKDHNNFKDPKILLTSTIKLRKTTANYYCIPESSLPNIISFDQFI", "length": 655 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556H5-1", "protein_name": "Cofilin-3", "gene_name": "cofD-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTTPKPTIAKISPECQTHFQDIKFRNKYQGILLKVNEESNMVVDKTLVAEGEFSELAQSLPTDQCRIIIYRYKSGEGSKLFFIYWGPDSAPQQDKLIYGNAKVTLAITLKGIDHKISASNLKEISEQVFIDRITPKTA", "length": 138 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556J5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWNHNLCHAINLDRQFDHINNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKNNNNNSYDYSFSVHSSQQYSRHYPNSCNNEQTKPKDYYDHASRSQHDYHANGSNNGNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNNNNCDSNYNSNNNNSNNISIANIKYQQDQHYQHSDTYTSHQYNSFNDNNNNNNNNNNNNNNNNNINNDNDNNGYNQYDESEEDEEEQDDYDEFDIQDSASSYNDNCGVLNSNTYIYDYQSPQQPLYSNEYQNNNHQPQQTDSYNYNNTNNDNNSYNINNNNNNNSYNNNNNYNNSNNNNNIGNIDSNTNNNNYNYNYSNNGDVYNGYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNMNNMNNMNNNIITSNREQFYSNNNHNNINQYQYQSQQQQTQQQQQQTQQQQQQTQQQQQTQQQQTQQQQQYLTQYYQQELYSQSYKCRPYYQNSFVISKC", "length": 480 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556P1-1", "protein_name": "CWH43-like N-terminal domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISSSLKPSVLLWILAILIPSTLITTYTLTVLLFHGIRRTVPYISDTIDFSPESCIGTFFISISAFLVFIVVFVKHFLLQNNINQNFNIDIILNENENEKKKNRAKMLNRISTFLGLICGVCIHGVSSFQYHNTGLVHSIFAASFFFTGFIYIFTQTYLDHKFSKLPKRILILRRVISLTTSVFIGYIILQFFIDNLAPILKIISALSIFFYLISFFYEFSKITINFQINTISQIEHQKEYNENSALLISQ", "length": 251 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556R5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLINAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYLKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKPTLQPSTICADTGVYSESNFTKTIQR", "length": 861 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556X2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557C9-1", "protein_name": "Homeobox protein 5", "gene_name": "hbx5-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METIVNNQNNGQQNTVPTQSFSSSVYMNYDFFDSQQLQQPQHQPQHYQQQDSFVSPNLDNNNPQIHVQSNNYNQNGFVGYNNSNNNNNNNQHMNNQYSNSFHNNNSSGFMAFQNNSSNFNNQNNNNSNNNNNNNNINSYDYNNSNNNNYNNNNNTHSNNSNNNNNNNNSNYWNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNHHHHHHQQQSQPTSPYNNPIQHNPNDMKFNGQHNPFNGNQMVMDNNNNNNNNNNSNVFNSNSNSNVFNSNSGSFLQINNNNGSFSSYNNNNNNNNNNNSNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNQFSQSYDSTLGNNRFSSMMGQPIQQQQSPPQQQQQQSFIQSSPQAIPASNCNGNGSTSSSTSPLSPTLIGSAPGTPTSMLATTLFGFNLSSSPTSSPSSPVKKGKSQSALALSSSGGSGGSSGRKKPQKHDSMSSITNTNLKSTQASTLKESKRSNSSPNLKKQMQLQQLQQQQKLNENGTLIPPLPFASISENITNNNNNNNNNNNNNNNNNNNNNITNNPLSGSMEFPNSNNINQSSDSINGEFNIGQPESPKMYNSSPSPPPNATSTTKGGKKSKKSLHISTTQQSPSLNGSTGGSMLTPTMSGLSLSGGGSGGGFSPLISPTGTTSNKDLQSSPSPSPLLKSMSMGKLDLQDSIDSMSSPLSPNSSLSSSNGLLPPPPNSNNMNSSGGIPTPSTPTSPPPLTHHINIFSNLEFVKQLKDHLLPNDFKPEEHALERNLLRFQQFVKTLAEPLQRDVVTSMFELSVDAQLQYGSNLDNDNLSALMLFRRKILNFNLFRMMMLNDPNSFIPLPSPFPIQTTTISSNGTIVNPTNVNNNNINNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTSANTVQSGTTSNSNLVFQQTSNSNTLSPSQQQQQQTQQQQSINGSSTGSLSDAQYQDLGIHLDTSSANSGCGINVSIGSSIGGGGGGSSLNGSNLNGSSSISGSISGGSSNGGGQFIMSPQFSLDGAYQQQQPSSYNINNEMELAEKDEDEIFNNNNKDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSSINSNINNVNNCNINNNSNSNNGSINSPRPSTPTTLNSSGKRSKKIYRGDSFGAGNDISTGLMASSDQIIPPPQQQQHQQLVNNNNNNMNNSENNILLADSNKGLSVSLGSLPTNTPSSMEIEQQQQQQQQQQQQQQQQHLNQQQILHQQLHHHLSSSLGGAQFTNIQQQQQQQSGNIFYNSPYNSSQVYMNPYGTSITNTSLAGPSTTSSAMQHMITNMTSSNIIVNNQNNNNNDQNNNNNNNNNNNSTTNSNVNNNNNTTNTPSSPPQPNNCTPTQTSIITSNGVVVPSLQMRGTITNPPPVLPTPDTLVLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQETPHTPTSNSISSPRSSPVHQQSPSNTNTTTTSTTTIRHSAVTQLSFAGLHNQQVSPISPRSPRSPHGTSGDYNDGSQSPSSRRKNRFTDFQIKRMNDCFENLDKNNNGKFTSEEICQIATELGLTDQQVRVFFQNKRARSRPSPRGQPTNPLTSSTNNGNNSNLALQHLQQQHLQQVQQQQQQLLQLQQQQQQQQQQLHQQSANTTPQLNSMNPNSINYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNITTINE", "length": 1723 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557D0-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTGSNNLNSLNNNNNNKISLQETIQDIIKCSICLNSPKNPRFCPRCSALFCLECIDRWIISNPTCPACRDTLTSDNLNSNLIVSNILNELVKSEQEEYTSSDICNYHGYERLYYCSTCQEPICSDCALFKHKDHKIEKLSINFNKNLEILKIEEEALKKRQEELIELNSFLELDAETLLKNKSQIEKEISKVVITMKARLKYDFERRYNTILESQEKINNELTHLDFIYNDLLNHYKKSPSSFVLTSQQFIGVLQSVHKNSIMDIYTPINTDLTSELIPPFENRLLKFENFTTGDCLFSSRIAFYGMTWEIKCGIEEDNCFLNLKVLECNSDGKYFYMFTIVNQKTNVNKLIEFDLPFQAGETFYIPNFSSKQTLIDEGFILPENDILLLQFSFRPQNYFCYSNDLKRYIDILEYRHRGYFGEEDEDDGTIETTVTKLPNDKSTILGSDNYNDNYNDDGIGDLDEDEEEEEDDEDDDDNLDDHLQYDNDDDEDEEEDDEEQNEEDNDEEGTNIPTSEYEDLDTSSASVISNINRRDRFKNNNINNNNQFVNSNNNNNKYNTTNSNNSIVGSSRYINNNNNNNNNNNNNNNNNNNNNNNNNNNNNYILNRSYSTNKIYNFYQDEEEEEEDDDSNIDDQDEDEEEEDSEEESSLSSSDLQDLDSSGDQSSLEFSFSKYTNNYYSNNNNNYNSGGGGGVGGAGDNNKIECIRRDFNNLLKRINFTNSQLTNLKPGVPKDGDLLNDDENDKKCNIPLNEDEEEDEDEEDDVNKNKTTSTTTTTTTATTTNEVVTINPNTISNNSQDEEEVKSDIVKLLENGIANMLNNSNSSNRSSNNLKQQQQQQQQLQKDDQKQKDEQQNKSNTGCDIDQLNILSKLSIKESCDSIKNNDNDSLGNSTNNNNNNNLNNNNNNNNNNNNNNNNNNNNNNSNNNNLQSFLQSNENTENETDFNDNNTNPETNTETENEYLTSSNMNLDGGESEFDSNKSYEGSSTDENFNSDEDYQDEDNFNQDATGSESANNDDYLDDNEREGSDSIENYDEDIEKVLTSHNIITTPSIPPSQQPQPQLQTQPQTQPQSQPQSQPQLQPQSQPQPQTQPQLQPQLQPQLQPQLQPQLQPQLQPQLQPQTQPQQQKKYDDLSENQIQTENRNKKIKEEINNKTNNDNNNELGKSSKSNTSSSSSSSSSSSSSYSESESSESDSNNEYDNEDEDDIVNQVSNFNFNFNDASNFKNFSFRPKFPSDENDNDDNDDDYEINIDLKNIQKISPILRAIENGESNINHYQSPVSLSSSSSVSSFSGSGNSVPITATTTTTTTTTTTTTTTTDDDSGINMPISPLSASPPSPPPQNEPQINNETNDNDVKLPQI", "length": 1364 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559A9-1", "protein_name": "Probable polyketide synthase 13", "gene_name": "pks13", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENFKYRNNENDVAIIGIGFRLPGCKNFTPNELWNNLKNGFNGVVELSNRWSDNFYTMGKVSSAYAGLLPFDELKSFDPLFFGINPTEVPTIDPQQRILLKCTWEAFEDAGIDPIKIRGSNTSVFIGTSTNDYQRIIREKDQTITNAFGTSLHATSNRISYCFDFRGPSMTLDTACSSSLNCVKLGYQSIRDGTSNLSIAGGVNLIIDPYFTASISDLNILSKTGSCKTFDASADGFARAEGSGIIVMKNLKQAMIDGDKIYCVIKGASSNVDGGGLQDKSNFYAPSSLSQCNNIKMALKSTNGTVEPKDISYFECHGTGTPTGDPIETRGISMVFNDESRSKENPLLIGSIKSNIGHLEAGSGIASLIKCCLMFKNKCFAPNINFKVPNPKIKFEEWNLKVVTEPIQFTKSNTCIGLSNFGVTGSNCCLILSQFNNNNNDNQIVGNNNNIKSNKEYLIPFSSNSVKSLENYQQLLIKNGENEFKFLEFIKHQIFTKPTSLYQRSVVIASSWDQFNNAKIMKTSNSKSSNISIERNNPITVFVFCGQGSQYDRMGLELYNNDFIFKESMDLLDNKLSKYYGYSVLEKLRNCDSKSIQHPMIAQPVMCMFNISLFELYKHWGIEVSFIIGHSLGEIPAAYCSGMINIDTLCYLIYHRSIAQTKTHTNGRMLSINISADEYFSQYSKQYPDIEIACFNSPTSIVIAGNEQKLNEISEILKEKGIFSAMLASLSSFHTSSQNKVKEDIVNKQFDSKQSEIPIFSTVTTNLFDSVTSPFNSSYVFNNIVSPVKFSQTISNLYKHIESNQLGNDIVFIELAPHPTLQFYLKQMIPKPTNDDNSIEFKVSVYSALNKKNNDIEEIQRTISQLYCDNGYNVNFKCQFQHDDTHGSINSNINQLSNISLPHYQWDDEKYWKEDPSISKLIVNGPQTDNLGYLNENSPNSKSYETFIDIKRPPFQYLKGHMVKGKYYFPGCGYIDNLLKIYKSQDLTINQMGFKSPLIFIEGVNQALQTNIFKKSTSNTTTNNNDEFRVEYHFNDQKTNRWILSSFGDFQLSNHSSNSDNLEKINIKQLIQNQCNLTKLSRDELYSHIKSKTGLTYNGVFQGVNKCYLGENCSLSEVSLELKREPSSFFNTAVLDTCLHGMLCLLEEQSQLVFDRIEGFKYHSSNVPTSEEEMKIHSNIYVYSTINPSRIGDSYSASIVIMMEDGTVLIEIENAVCTSLTPIKESISVKYPTNQLFSMYLQSKDSPIPSPLNFKSLYNQNQQQLKIDKQFTDWMQKCEKFISNQFFKNIEKRNPEINLEILNSKTIIELKSKYCQNLKNERLFQFVFETIKQLGVNAYDDDDDLTIDSSEDRKSIYEILIKSTKVIPKLLFPLEDEDLTIDSPQSLFENGLLDRFYNNPNLMTNQCQLIAQIIKESLKPLLNKKMVFRILEMGGGTCSLSVVVLNLINQLLLENPSFEIDIEYTWSDISPSFISAAKEKLSHIDKRINILYRSIDIEQPFIEKQDLSPSYYDFVIMSNVLHVVKKLSPSLDEIHKILTPNGHLLFVEIPYKELISDSIFGAFNQWWAFEDTDIRKDRCSIPPNQWIQVLSNHNYKDTIVSDNKECTWCCFVIHSQKPSLLELSKKIECNQYDNIIVFGNENSQDNFTKSIKLSYNNNIIKWVSNIVEIKKFIKLNIITNNSIIYFTKGIEELTIDNFKLINFQYIQINQLLLKYESKCKNVLVTRDCDGSNYLASSLIGAARYFDEYRQLELFTLDFDNDTIQSCDECSSSSCSNLIKLIEPLIDPKINIQREFLIRNNRVYFERAKLETNLKKSFKSESFENSNKLISTLNFNLDYQLQSKPFKQLLQNEIEVEIKATGINYRDYLVFTGSLPIEKTNHNGISNQPEFGVDFSGIVTKVGGGGGNGEFKVGDRVYGIGHNTTSSHITIDSRYASLIPNSLDYIEASSITSSYILSLYGIFDIGNLDIQDNESILIHSGTGGIGLSALNSLRWKGHKSHLFVTVSSKEKEQYLRDNYGSFITGIYSNKDKNYPKLIKEKLNQLGSNKQGVDLILSSLPNGDDNLNFKCLAKNGRIIDLSNNIDLFNISKSKIKKLLNTINDGFESGELQVIPIIEFSNSNIRDAIEFINERQHIGKIVISHDDSNLLIDLINKHSNQPNYSILKSDYQISQSNLGKNILITGQSGIVLEILKWIIKFSNSIENVIILSKSLMKWELELLIGKTMKKANNKIKFHFKSVDVSDSIQVENSINQILNDNPNIVNIDSIFHFAFTQITKKVEEIDMESLNVSHNAKTIGAINLHNQSINRNWRLNNFVMASSATSIIGSTDQCSYVCANTVLDSLSKYRKSIGLPSICTNYGAIESAGFVSKNESVAAMFNGIGIISISTDLILGTLDLQIQNQQSSTNLMLSDFNFLNFVNNNLQLSLISKFDFQTNLAKNQVNEKLQNQTQNQNLQIQSPSSTTDCQTIIKDSFLHKISEVLSIDISKLNLDLKLLDYGADSLAIVQIKNWIDMEVSPNLIVIQQLQTFTITSSIQYTINSFLKKKVQSQE", "length": 2551 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559I8-1", "protein_name": "Uncharacterized protein DDB_G0272530", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIKLILVLIVFLTIVNVNNSIDLCLSNPKKALVNQACKYSTDCEYPLFCGSGNGYGKNATCSKNIETGGSCESNNQCTPCNVCFNAKCKVKLYLGDACDENKSYCSSSVCIKGKCSIQGDVCTANNQCKFNNYCKSGKCVPLEKEGSSCDKDSSCSLTNACVGGKCVTKYQKPLGAVCNSSNECQVFSGHVCGANGKCSVYNQLLSKCKENSDCGPNGMCMCKSETENVCVDLSVGALKNDKCPSLLSSFSSCMTRERCTENTPTGCPKCYPIFMCYQYSCFYMNQFIRSTQNYYKSFCS", "length": 301 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559Z2-1", "protein_name": "E2F/DP family winged-helix DNA-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNISLLLNNRNRNRNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNGNANESASLNNGSEEIRSNPSSNFSSPIQSSLSSSSSSLSSNQATTPKKRSHAHKNSLKCQSPQMSPQMSPQMSPQMSPPLQYFPQHQMQHLSQYQLDHLQQQQQLIQQEQQEKQQQQQQHQHQQQQQEQQKQQQKQQQRLSPQPRSSQPRSSPPRSSPQRSPQLNQQEGHINSVQTYSGNNINDKNQNNTNNNNNNMSNNNNFHDDNNCNVNYNNIRNNSNNNNNNNTNNNNNNNNNNNNNNNNNNNNINNNNNNNNNSNNNNWNNNYCNNSFADETNKNNTYGMEYINISEENQYNNNNNNNNSNNNNNYNNYNNYNNNNNNNNNNNNSNNSNSNNNNNNNNNNNNNNNNNRNNIINSNINNSNNNNYNDNGYNNNSNINSNDSYNNNNNNNNNFNNNNFNNNNNNNNNNNNNNNNNNNNNKNNNNSNSYNNNNNNYNNNNNNFHNNNNNSAHNNNNNNYNNNNNNNYYNSNNNNNFHNNNNNNNNNGNNFNNNNNNNGNNGNMFTNVNSIDNVNRNNYNNYNGNNNYNGNNSNNNNNSNNEVSQITTTSLPVKKTKVFKAPREKKFKRGPDQDIREIKPATALLKQYFIGNSITEFNAERVGSILKINHEKLKDILDIMECASLVINNHSNNYVWLGLDNPGFLKLVFNVFHCSSNLVTKEPEFACLKCKENAYRCPTSVDLPKDTRLGSTVCQFMKLLLSKRIRTNPVNDFLTIYQVCFNFNFCSEGRCPEEDFKYLRNTAKVKRCYDVANVFNGLNILEKVGKSKIHSYQWCGDFTIQDCENGCPFGHPLLTPGTAYTTNPSPNPFNQFSNAYISSSAQSSLSNSPFIQGGFHGNNNNSNNNNINGNNINGNNNYGYNNNNNYNNYNSNNSNGFNNGNSFFQQQQPLVNSGVSMVRNNNYSYSP", "length": 964 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55A39-1", "protein_name": "Transcription initiation factor TFIID subunit", "gene_name": "taf9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSSNETLPNSEQENNSKTDTKNDNKNIGDENKIIDTDKDMKDNDTINGKENGNININSNNNNNNNIDTDKEMKETSSIEEDDNNNNKNQNNNNNNNIKEENDNLTELKNNNNKENKENKEETIKEDKEKENNKEPVKNKEETNNINNNNNKNNNSDNINNNNNNNSKETLNKISSMSKVSLTSESSEINGQVNTGVVNNNTNIDITQTNLDEPRDSRVIKSILKTMGIQAHEPRVVNQLLEFMYKYVFEVLQDAMIYGEHSGKTDIDVSDVRLSIQSRVNYQISTPPPRELLLSIAEEKNKTPLPPIPNRYGVFLPPDEYCLTNPNYQANPTKPVFQPVQPLVGNTSRGNYNKKQSDKQVSIKFNSMSNNSTTTTTTTPPTIGSQNGTTIVSPPNLGSLGTTTTTTTTTITPPPPILPLSSNIKPPTLSIPSSITSPPTVTTKNTSTPIIGLGSTTVAPPKTSSSSSTIAPPVLSLPTSITSPPTVTASSTTTTTTAPTTTSPTIPSLSSPTTAATTITVKKEDVKMDDFDDFDGQMKDDITPSSTPQQPSQPTESETTTTATATTTPAVTTTTIPPTTTSTTPPTTATTSTTPPPSTTTTSTPPTTSTTPPPQIKEEK", "length": 619 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55B17-1", "protein_name": "Amine oxidase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKKILLIFALFILVNINFASSEFKKNETESANLKSLYASYLMKNNNNTKYNNNDNSNNTNIYNDSVTKNKSKNKNELTVGIIGGGIAGLYAGMLFIKSMIFDDLGIDYTILEANKERVGGRVYTHKFDDHKYSYTDLGAMRIPLTPLMDRIVSNQNYSLFSKLAKGGYQIPTVPFLISVNNEISYYNGIRVLKGSPVLNPSDPFNYSDSNNGGPGKGIPDEYANRTVDSLILPVFYQFINNLTVDFYNGFKQMLKYDSYSARDYLKTFHNYPNSVIEYIENLSTISGRLDQTSITELLMSVFDFSGEKFVCVEGGTGLIVKSMSQIIKKKVEMGSFVTKISKSFDKKNNEIDGLNVEVVRDSNFGGSDTEILKFKHVISTTTLPALQRIDTSDLKLPLKLKVAIRSLKYTGAIKLAINFKYRWWEDSEFMSGKPIRGGSSNTDLLLRQVVYPSYGINNGTKGVSGVLLASYSGGLESIRISSMIGKKDKERKLLNIVLRDLAEIHNVDLKKLKNLYKDHFFQSWDNDEFSSGAFALFSTSQYTELFPSTGQSHVDGRFHLSGELTSVHHAWMIGGLNSAYRSVDLILKNEGFEDLRIKLRNNWGTIEQAEYPSLDWYKYDSDINHYKLY", "length": 630 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55BT6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLLYIVVFLLFAIKLCCSEYCGETYCVENRNCYSFIGCRNSTCLYETIDLDDEVDCTVDTCSDRYGVKNTPNNSLCPPENLCDMFLCDTQSGCVAIPKVNCPAPNPCQIPLGCNRETGICEYDEIDCHDDNECTNDYCDPILGECVHFSNDTICSNKASNFSTCVLSGVCGEFGCKYVEDNCNDGNPCTDDYCDFKNGCVSQKNDWNCDSLSACSEGICTDNGCVQQEVDCDDDNPCSEDFCHPLFGCGSILNDTICTNGNKCVNSTCTEDGCSLPVPIVCQDGNPCSDDTCNPSTGCQFTLNNSNCNDGKKCTIDQCGLNGCTHTNITCPPKRVVDIILIGLICRNHYCDQSTGNCVPDMNSVSLLCI", "length": 370 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55C69-1", "protein_name": "Chromo domain-containing protein", "gene_name": "hcpC", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGKTNKKKIEEESEEEEAGDVFEVEKILDKRVQHGRIQYNIRWKGFSADYDTWEDEANVVGCPELVREFESSRIKEKKKNRKRKNVIIDEDPTEEISSSLSSILSSPQPQPPPPLQLTNHSPASSELAITTNTFLISNCTSTSNKTKISIENEEIIKNDHARYGVPYVEGIGFENGDCVDEIVGCKPFGENNLLYFFIRWRGKEKLSWVSNESIKQKEPLQLIEFYESRLKFGYKGEEN", "length": 239 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKNNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH7-1", "protein_name": "SsDNA-binding transcriptional regulator", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIFKITRTKRRWTKNQKKILVMKVVEKKVVVKKSKTPNTSPSSSSSSSSSSSSSSSSSSTNDKSFNLSDKRKISYSNFKGLERIDIREFFEDKSGELKPSSKGISLTREQLVVILENGDTIKDWIKESK", "length": 129 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CJ7-1", "protein_name": "diaminopimelate epimerase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEPSIDNKPSFRINFTKMHGAGNDFVVFEKNKVERLNGDKSTVTFEEIVGFTTKIAHRKLGIGFDQLIVIDDNPIDKNAAYGMDVINCDGNIEVMCGNGVRCFSKYIVDNKVLSKNLKEQLNFDGDDDIEQIIETKSGIVKTYPLLKHHLNNKDNDVIMVKVNMGTPKVSRFINEIDRHIPKVLTNQSPIESYMYTIDIGLPYCSKLECVYVTVGGNQCVVFIDRNIELGYLDSSYGDHTKFSTIDFKEISDIIQSNVNGFDDIPNVEFVIQSPQDKLENKVISRVVERGNGETLACGTGACGVAISSILKGYCNENTEITVEMPGGKLLIQWNPNNEIFKTGPATSVFKSQILI", "length": 355 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CV8-1", "protein_name": "Lipocalin/cytosolic fatty-acid binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MELLVGGTILGALTYAYSSLKRTIPEGAHACSPFYPEKYVGKWYEIARLDFYYERDMNNVSAEYTLNKDGTISVINSGYNYVEKKRESVNGKALFVHGSDEAMLKVSFFGPFYAGYNVIAIDPDYKYALVAGRSLDYLWILSRETSIPDHIKKQYLELAESIGYNTSKLIWTEHDNINNKKD", "length": 182 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D49-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D57-1", "protein_name": "J domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIQVKNKIKIISILITLFILTINQVVECKSSLYYSILNDYEKGIDYYKILNVTKDSTYSEIKKSFRKLSLKHHPDRNVEKSSHSLYILLNQAHSVLTTDETRKEYDELLVNGIPWHENYYGKYAYRYTGISHDLRHVLLGLIIVITIGKFVYQYNKHHSMIKRAKQTDQYKKRLAQLDGDEDEIQLVIQGADKPTISSLFIIQLFFIFPFKILKSIYTFIFINKFKFIQKTDEEKEEEYRLKMGYTKEDWEYHKKKSIERMEKLKQSGKYKKYLRSKNK", "length": 279 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E25-1", "protein_name": "DRBM domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKSHTSEKVQLNEFLQKKKQPIPIYHTESKGSEHNKDFKSIVVVNGKQIESDWKKSKKESEKDCAKNILEFIETLDGYPIYFTPFSKDPPQNNKKIYDEKLQAVYNSVSSGIEGLNNNSFFTKIENNNNNSSSNNNNNLDHNHSNDSSHTSTDNNDNNSNNHNNNNNNQINIDLTMENVNISQSKTITNEGTLNNDNDNNNNSIQQQQHQPQPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQCFDKDKTNLKKKKKIPFSYNTDLIEHIDLFKRQDFPQTYPSRTTYTDTGHTQQLQKQVFLLTEKIGLMELFYKKQIRVILKSHHNLETELSALKSFVEDCSVTPIEGLELYSIPVPLNPNAKPSAGTTPVLSKSETQNEIIQPTKPPTKPPASCLIKKKIPNVNMKATNKTTTTTSTSTSNSSTTIKTTDSFKNTTNNQHPNTLKPMVSKINQQTSDFIFPLPKPIIRRNPIGNGNLEKKIEKKNSKPNTIVLGVDTQSQSKTKITPSPTTPPPETTPTTPTTTATPTTPTTPTTPTTTATPPPTTTATPPPTTTATPPPTATTPPPTTATTTPPPPPIIATTKTTATATATTIPIDLNEIQIPIRSPQDLTVNQSMISTAMMIASAAQRNPKLTMKLKRKLEESPTLMSKLQKIQFEKEEEILCSQDLHSPIMSPQSPTHQPKTLEPLSPTKKSTQKSPPPTSPSPIVTRARASSNLLPIQNLISKK", "length": 733 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E47-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E48-1", "protein_name": "thioredoxin-dependent peroxiredoxin", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKLKVGNIAPDFEAKNYLGQIVTLKEFKEKSQPIVLYFYPKDNSPECQKSCEFRDKYQKSIEAGAEVIGVSSDGEDSHKSFVSKYSLPFTLLTDKHSKLAKLYGVNGILLPGRKTFIIDKHGFMAVFMMVYSVQLLMSMNL", "length": 142 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55ED8-1", "protein_name": "Decapping nuclease", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQTLNVIGLINFIKKQRSFNKSPITITKPLEITRFSYEGNQLFPAKLKKFKNPTIDSDLLVGFQGPDSIESDSQTPLSLVLNKLIETKHDVSKSNFISFRNSFRKLFESMYDSEKWNIQVQRINSTIHLGMDNPTQDFHQLKNFHLKSMYSGNYFEKISTIDNNNNPNDNKHKYCSIIQSKLFNNNFILACEIDCWKKSIQNNNNNQNNNNNENNNNDDDDENYNIDDYVELKTSRDIEDSKANYQFRSKKLIRIWFQAYIAGVSKIFLGIRNDDFFLKKCLNFNTHDLPNQAINWNKDEMLIYGNEILEFIKNNTCSGKSYTLSFNYPIISLVESDSINIINDQYLQYYLNIPKNFENNYNQNNNQNNNNNNNNENNSDDTKNNNIQNNNENNNIQNNNENNNQNNNEKNQKRNFGEEKEIKGDENEERLSKKQKKLE", "length": 440 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55EZ2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55F94-1", "protein_name": "Dynamin-like protein A", "gene_name": "dlpA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSVFKKKDKSDDKKKKHDEETPQGTFQPASQSTSNTNLNSLASSVNNGASVGSTNGSTPNNSNGSTPTYNHNNSAEELEKQKKEEDEKRKKSELEAAAAVVAKKKEDEEKQRKEQVELERKRRDEEIRRTNAAAANAANKELNEQVEISSLEQMGKLDPSSTIHDMFSFFPNEVYNSYEKLQYFSRDLNTAVSHPEIVFVGPRSSGKSSLIEAFIGRALNIVGGGNIVGVGGSNANGCSKRVLYLQFTNNIDFEVPKVTIKKDNTIKEFDHDIIVSIEQLNENLAKRNQLTNDYIEEPIYVSIESRTTLNLTLIDSPGLLFDQSQAESNKIESIVSSLLRPSHRLIIAVESCSQDWKSMSMGQYLKKIDPELSRSTFVFTKFHHTVRGFSSTRDINKYLSGTVPDIKGFFVTLPNHQVRASYSEANRFQEKIYQAHKRDMHALEQLQYDKRYERTIGVAPLRRYILNIVWKSYQDTIPRILKHLRSKRQTAEATLNELQKQSSSLDSTKLRSIASNYTVTFLQITEKLLSGTSEGNPSANGQTLDEEKSQQGDCGEWVDAYKEAIYIDPEEWNIPYWSSKLYGGQQLERLMAEFKAVCDNSKISEVKMDDIATASGINKLNNIPNYAWAASDLTSLISRDTFVPLIEQLCERAMYIMKRLTDIADKVIDSRRKSRCIGSSPFGGNGLNNINSGGNNGININDRLSNTDMDSLDQYPFFTHHVKNLYYDFVHRAAKGCKEKCMDEFYSSRTIYWELTEHPDSSLPSIRNDHHETKTAVCQLATKLFDSIRQRITKNVLLKLYNFFLVPMQTDLWNEIQAQITCLSNEQLEQLFEVQATREQLKQEEKKQQQILEKYSQIDEQFLKAASLFCRPLSNPTPSA", "length": 880 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55FX4-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDINSNHIKKINDFKDKGNKEFNKEKNKDKLNKRAITYFQLGIKYFNDEKHKIEINDQINKLISILYSNLSLMYLKGDEIILSLEASNKSIEFNNQNSKAFYYQSICKSYLCDYKGSMESIDKAISISKQDEKVVQQRNRLIEITNNKVKEDVYFENVLKNQKLENVAYENSIEKGRYLISKRLIKRGEEILRIAPFSFSLNGKYVSKFCGVCYQKKSIDNLLKCKDCDDFAICKECKAPNEPLSKYHPNDLCVLYKLNNEYYKMNNFEIANEDNKERGLTDERRLYINTIYNIFKNKTNNKAVVEVDNAISSSVIDVLNLSKKLLNHTNESQRAYSDSTKMKTDILELIFKSFYGANTLKKDEISNIIRIVDCNSHGYSDVISQKKKASGLYPFSCYTNHSCIPNSDYFIDKHGVMVLYASSDIQESEAITISYIYFLNRVEKRRKDLLNGHNFFCTCDQCSFQSSLTEEVCDKCNEIIPSTIGNSNLVYKEPKSLKETGFNYICPKGHTKSSLVYDIDNDQLYPTIAENYSKCKDLRNFRKINIFKEMLENRDFVKKLTPREFEVTPLAKYIANPKKSNSMLFEELINLVRGSVECGLTKSIEESNYSTYLVYDYYDLYKSLLLESKPQILKLNSIRDIIIKLLTPMVYNQNKPRIDKKLNKHLSNKINLKKNK", "length": 676 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55G93-1", "protein_name": "Tubulin-specific chaperone D", "gene_name": "tbcd", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENSEDISLNSSEKSIESSVVNLEDQQQSQQQTQQQTCQKTFVQEAPELTILIDKLIQLKHSNKDELISNTTRIIYIIDQYLEQPTLLDIHLNDIIQPLINFIKSNYINNSNNNNTTTTTTTIMTETEIVIKKLSIKNSFRIIYVLSKVRGFKTIVKLFQHEAIDLLPVLDQLEISYHQWVNINKQRDRLNEISVSYSSGINLKNYIKPEEESEQEVVDENNNNINNNHNIDDEYNENIISWEEVYVLALWVSLLVIIPFKFSSLDSASSGTASAAGDGGDGDGDGQLKSISSRILKLGKLALSDVSKIRDSFSELLSKLLNRPDMKFEQKQFIKWCTNSIQLISNNNNNNNQNNSSNNNILLIIGIYSTLATMFKKGNRLDFLPIDMNLYEKIMEANKYLSLSGSERITKKIFLKLLQRIAIIMLPPVSASWRYQKIIKPLLLKGELIKQINNNNNNNNNENNNEEGEEEEEEIPEEIDEILEEIMKSLKDKDTIIRWTSAKAIGRIVNLLPKDMGDQVIGLVIDQMFEKNEFIDADPSAWHGGCLALAELARRGLLLPERLDVVVPLVIRALFFDIIKGTYSIGSHVRDSACYLCWALARTYHNSILSPYLLPICRNLVVVSLYDREINCRKSASAAFQEMVGRHQGLVPNGIEIVTSADFFTVGNKNNSFTSLTTFIGKFQIDYYPIVIKHLATIKIYNWDLEIRQLASKSIHLLTNINPNDIVSNYLPLIIPNTQSDLVHVKHGASLAISEILISLFENNNINLLSDNLKMMILMTIKNTKNEKLFKGKGGVLIRIGMCKIIYSICLVEFSLDKNLSEIKKPTESTSTNGNEDRAAALKLKIAMLKAKTASQINKPIITPPSSKSTTNNNNNNNNNNLNDNEIAFNIILGYLNENLNHPNEEVQKEASKAFELLFSKYISSNEKISLLLELIDSHCKTLKFDINRSARRGSSLLLGSLPFNSANLSYDLLSKVVNELILSIFQDDPKFKDIETRVNSISSLYKIGIYILNLIFKNQENEQKEEEDFKKSKNYNLFIKIWNCLGLATNDYSIDKRGDIGSWVRELSCKVLFDFIKFIITNQNSSTTTTTASTTDLSIENLINEKMITEFICKLFQLSGEKLDKIRDVACKIIHELLWIENPSSINNIPHKEELKKIIVKDQDVHFNWFRTEESLPLICKVLKFNCYLYPLLFGLFSSLGGTSKYLINDSIQSIKQYFSSFDNDEKERFEKIISFSKAILEITNNTTQRMIQPTFRSIYNLLSTHIFDFLIINNLNEQSIFETILFNCYQIIESNQDDIYLLLNSIELFSYFFIQFENNNNEYIKDYSLKALLLLLSNLKYPKVRKLASDQLKKSTRLFINNNGDDETPSLIKSLIFNTKWDDSVDLIIEPLKSLLLLLNQKHLLELLSENPTKKPIPLAPPITSIEELKDKIQNPHKQSDDNNNNNNGELINNNTENNNNNNFDDNLPEDSQDLMEI", "length": 1480 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GP8-1", "protein_name": "Rho GTPase-activating protein gacO", "gene_name": "gacO", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSKLPPPPVQSSPQGFQLPSLHSVQLKPVRPPPQPTQQQLASNTSPREVGTSLSPQSPSNNINPSSSSSSPSSSIRQSPSSSPNVARKVPPTPTNNNGGPPTTTTTTTTTMPPPPAFIKKLSPSSSPILPKRIVSSPPLNGNTAPPPPPIVHLPPPPPTNLPPPPTLSPSSSTTTSPSSSSLNLSGGVPLPPRILRNSDGSANNNNNSNNNSNNNINSLNLSTSGGIPPPPSFFNNNNNNNNNSGSFVNSASSNGSPSLQSQNSVGYFKPPPPPVPTRSASLDPKQMGQFIKPQQNQNNSNNINNINNNNNNIILPPPPNININNNNFVPYIPSNNNQQQSTTPPPIVSISPLKRNSIDNSVVNKRLSQDLNTMLVNRLQHGLSPPVATPFFDDKILGSASKSAELKEKRDQEERERRERERIKKEKEDSEKKEKKEKKGKEEQEKKDKKKKEEQEKKDKKKKEEEEKKSKSSSSSSSSSKKSSSDNTIVNQNIFNNTLSQIMENQRDAQSLSPSSLPYPLILKLLTESIMSLNGPYTEGIFRITGSGTEVNRLKKQINEHDFSLDTQDPHVLAGLLKLWLRELVHPIIPSELYNDAIKSRSKEEVSRIISLIPDQNKEVLNFLIPFLKNVSQPHYAQYSKMDIDNVAMVFSPGLLRSTVLTTDLLLNSQYEKDFVKCLIEMSP", "length": 684 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GR8-1", "protein_name": "Thiamin pyrophosphokinase thiamin-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKQEEEVQQQQQQQQQQQQPDKNNKETITWDVAEYGGYLFDKKLKAHNPLNHQMPLQYHHSQSTPHIPSSLSTSSTTSIKKPSSSLSDDESGGSSSSTPHSSNTPRKQFSFDDHCALILANQKLPKKLVDYFWDKCSVRICADGGANRLYSLGTKINQSSRWIPDYIKGDLDSLHEGVSDFFSKKGSSIVLDSSQDTSDLQKCFELIIDLEKGSGIKYRKIFILGGLGGSFSHEFANVNTLFDHPGRKIILASKDNLAWLLSSTYNHNIICRSETKCSLIPLSSKASQVTTSGLKWNLVKQSLNFGELISTSNVSLDNKVCVETSNPLIFIVDINP", "length": 337 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q561S0-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial", "gene_name": "Ndufa10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALRLLRLVPASASARGLAAGAQRVGRIHTSVHCKLRYGLLASILGDKTTKKLHEYSRVITVDGNICSGKNKLARDIAEQLGMKHYPEAGIQYSSSTTGDGRPLDIEFSGSCSLEKFYDNPKSNDGNSYRLQSWLYASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGFIRKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVSEIQSRIQKKGDPHEMKVTSAYLQDIEDAYKKTFLPKMSEICEVLVYSSWEAEDSTKVVEDIEYLNYNKGPWLKQDDRTFHNLRMLVQDKREVLNYTTVPVYLPEITIGAHQGSRIYDSFRELPGRKYAPGYNADVGDKWIWLK", "length": 355 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q568T5-1", "protein_name": "Chondrolectin", "gene_name": "chodl", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRATLRILCALTFLVSCSRGARVVSGQTVCQGNPEHPCYKIAYFKDVSSRVAFWEALQACEMDGGSLLSIENTAEQKHIEHLLRELSVSSSTGPASITDGDFWIGLTREEGDNAQEPGAFASCPNLYRWTDGSVSLFRNWYADEPSCGGEACVVMYHQPTALAGPGGPYLYQWNDDRCNMKHNFICKYEPESHLVKVQSDRPGGHDVDLSTEDKEDRRTPPTDEDESPRLIIAGPSSMLLIYVIIPTIPLLLLILVASGTCCFQMLSKSKPRTKTSVNQSTLWISKTPKIDSGMEV", "length": 296 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5HYN5-1", "protein_name": "Cancer/testis antigen family 45 member A1", "gene_name": "CT45A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKAKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETASSPKSQREINADIKRKLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5I0J8-1", "protein_name": "PHD finger protein 11-like", "gene_name": "Phf11l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQEEPGGSNSVLNGDANSDKKMEKWTCALCPEGHDWSVIYFEPSSNIAAHENCLLYSSGLVECGPHDPRNPARSFAVKSVKKEIWRGRRLKCSFCNNKGATVGCDLQSCPKNYHLHCAKEDRAILQVDEDYGTYKLFCQRHAPGGQEPTQVDAAVKASFLKKCLEAGLLTELFEQIQQKMISIHGRFMDDTASESDYEGIKILLFDCGLFKDTLIKFEEAIKSKACECEERLNQMKQQLELLADLQQNLRSFQECGVLDPSGSTSGSLLPPEDHQCRCQESPEVQAGSGDSL", "length": 293 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSKDLAIGVIFILQCSMGILRHFILLSYYLMLHYNKHSLKPIDLILMNMFIANFLIIFPKSMLQTVEAFGIKLLFSVFVCKFLLYIERVGRSVSIATVCLLSVFQAITISPRNSCLYGLKVKVPKYISLSIFLCWALYFVVNMILPVYAYIKWSSNNMTYKRTLKYCFSVGHDEFTGSFFTILFVFPEVFLAILIVWSGSSMVVILYRHKQQVQHIYCNYASTRTSPESRATKSIVVLVSVFICFYSISSILYGCIALFCDNSWSLINIANIISLCFPVLGSFVVSHNPDFPRFSLSWIRNTRRV", "length": 306 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNDRMESKDLAVGVIFILQCSMGILRHFTLLSYYLMLHYNKHTLKPIDLILMNMFIANFLLIFSKSVLQTVEIFGMELFFNVFVCKFLLYIERVGRSVSVATVCLLSVFQAITISPRNSCLNGLKVKVPKYINLSIFFCWPLYFVINMILPVYGCIKWNSNNMTYKRSVKYCFSIGHDELTSSIFTILFVFPEVFLAILIVLSGSSMVVTLYRHKQQVQHIYCNYACTRTSPESRATKSIVVLVSVFICFYSVSSILYGCIALFCDDSWWLINIAHIISLCFPIFGSFLVSHNPALSRFSLSWIKNTRRV", "length": 311 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3F0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "LOC100911184", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDFWNLAIRIIFLSQIIIGILGNVSLLFYYLVLYYREFTLKSTELILMHLMVANIIIIFSAGVPQTMTIWGMKQFLNDFGCKLLLYIHAVGRSVSICTTCLLSVFQAMTIRPQKFCGNDHKVTMERYLGCFISFLWVLYFLVNFIFLVYTYIKKNSNNETRKRDFGYCSTVGSDKISDSLYATLVMCPEVFFSVLIAWSSGSMIVILYRHKQKVKYIYSTHVSRRDYPESRATQNILAQMFTFLAFYTLSSTLRGSIALLSNHSWWLMNINHFTSLCFPSFGPFVLMSHYSIVSRFILFWLRKNCSNFLL", "length": 310 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5JQC4-1", "protein_name": "Cancer/testis antigen 47A", "gene_name": "CT47A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEGLGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEGNEAANFDLAVVARRYPASGIHFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT", "length": 288 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5QNN9-1", "protein_name": "Trace amine associated receptor 12e", "gene_name": "taar12e", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMSLNETQTENILLCYPLLSNSCPKLHRLAVVQVGLYVFLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGLLVMPYSMVRSVEGCWYLGDVVCKVHSSLDMTFCISSLLHLGLISVDRYWAICDPLRYRLRVTNITVTVFIVFIWLFSFVYSFYVVFSGVNTVGLETFIMQVYCVGSCVLYFNKQWGLICPILVFFLPGAIMSSLYMKIFHVARKHAKVMSERVTGGLKSQSSAQRERKAAKILAIVMGVFLFCWLPFFTVNALDPFFNFFTPADIFDAVIWFAYLNSTCNPLIYGFFYPCFQKAFKILIFTYICGVRNLDTFA", "length": 337 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5QNP0-1", "protein_name": "Trace amine associated receptor 12g", "gene_name": "taar12g", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTSNESENIQLCYPLLSNSCPKLHRLAVVQVGLYICLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGSLVMPNSMVRSVEGCWYLGDVVCKVHSSLDMTLCISSLLHLGLISVDRYLAICDPLRYRIRVTNTTVTVFTVFIWLFSVVYSFYVKFSGITAVGLEMLILQTYCVGRCVVFFNKQWGLICPVLAFFLPGAIMSSLYMKIFHVARKQAKVISERVTGGLKSQSSAQRERKAAKTLAIVMGVFLFCWMPFFTLTALDPFFNFLSSADVFDALFWFAYLNSACNPLIYGFFYPCFQKAFKILIFTYICGVKKANTLTFE", "length": 336 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5R1F6-1", "protein_name": "T cell receptor alpha variable 5N-4", "gene_name": "Trav5d-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTYAPTLFMFLWLQLDGMSQGEQVEQLPSILRVQEGSSASINCTYENSASNYFPWYKQEPGENPKLIIDIRSNMERKQTQGLIVLLDKKAKRFSLHITDTQPGDSAMYFCAAS", "length": 114 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5RKI7-1", "protein_name": "Solute carrier family 7 member 13", "gene_name": "Slc7a13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAMDIEKKIYLKRQLGYFWGTNFLIINIIGAGIFVSPKGVLQYSSMNVGVSLCVWVFCAVLSMTSTLCAAEIGITFPYTVAHYYFLKRCFGPFVAFLRLWTSLFTGPGVLASQALLLAEYGIQPFYPSCSAPAVPKKCLALAMLWIVGILNSRGVKELSWLQTVSMVLKMGILSFISLSGLFLLVTGRKENVRRLQNAFDAEFPEVSRLIEAIFQGYFAFSGGGSFTYVAGELKEPSKTIPRCIFTALPLVTVVYLLANLSYLTVLSPQELLSSDAVALTWTDRVIPQLTWSVPFAISASLFSNLVTSVFETSRTSYIASRNGQLPLLCSTLNVHSSPFIAVLLDVSMGSIAIVLTNLIELINYLFFVFSIWTVLSVIGILKLRYQEPNLHRPYKVFSPFLFITAAISLSMVLIPLIKSPKMQYIYVFLFFLGGLLFYVPLIHFKLKLIWFQKLTCYLQLLFNICIPDVSDEHVAEEES", "length": 479 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5XHX8-1", "protein_name": "Sperm microtubule associated protein 2", "gene_name": "Spmap2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGELGEHRSRSSLLSIPVLDTKTSGGSEYRESDGSLDLQSTLFEDHWLQSSQATTERNTDDPEEEIPPEEMVGEELPEVSNLEDSLRRDLEVEVVGMSHLSINERTTPTTSSAKCRKKKNHRLLELAKPKFNWQCLKDRTGRCCKGHVWISPRKTNLQFCLYWPSVYWTERFIEDTTLTITVPEVSRRVEELSRPKRFYQEYYNNNRTTPIWPIPRSTLEYQASNRLKRLATPKIRNNIWSINMSEVSQVSRAAQMAVPTPRTLRLAKPRAPATLLEEWDPMPKPKPYVSDYNRLLQLATPKALSEKCVPDRSPQWEVLNVTKNAVASSRIISLAQPKIRKDLNEGYNPYYISPASLVAQASPRIYELAVPKHITKKV", "length": 378 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q63550-1", "protein_name": "BPI fold containing family A, member 2F", "gene_name": "Bpifa2f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFQLGSLVVLCGLLIGTSGSLFDIFQNPELDVESVWSEINYRIRYALETMDLDMLADYLSKRGIELKIKDLRILNLNHEVSPNGDEVTLKMPMALNASLSLPARDLTTDVSISMEAITSFAIEKDPKTGRRVLNMQRCSLNTDNTSISLLNRKSNFVNLALDSALYLIKRGLTLPVRRQLCPVLQLIISNTFHPDEISNPQTAIST", "length": 206 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q64583-1", "protein_name": "Cytochrome P450 2B15", "gene_name": "Cyp2b15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVLLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFINTYLLRMEKEKSNHHTEFHHQNLVISVLSLFFTGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVIGSHRLPTLDDRTKMPYTDAVIHEIQRFADLIPIGLPHRVTNDTMFLGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDVNGTLKKSEAFLPFSTGKRICLGEGIAQNELFIFFTAILQNFSLASPVAPEDIDLSPINSGISKIPSPYQIHFLSRCVG", "length": 495 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q66X01-1", "protein_name": "NACHT, LRR and PYD domains-containing protein 9C", "gene_name": "Nlrp9c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVDSSSYGLLQYFQKLSDEEFQRFKELLQKEQEKFKLKPLSWTKIKNTSKEDLVTQLYTHYPRQVWDMVLNLFLQVNRKDLSTMAQIERRDKQNKYKEFMKNLFQYIWTSETNTYMPDRSYNTIIDRQYKALLDIFDSESDPATAVVLGTRGKGKTVFLRKAMLDWASGVLLQNRFQYVFFFSVFSLNNTTELSLAELISSKLPECSETLDDILSNPKRILFVLDGFDYLKFDLELRTNLCNDWRKRLPTQNVLSSLLQKIMLPECSLLLELGESSCSKIIPLLQNPREIIMSGLSEQSIYFYCVSFFKIQLGVEVFKDLKKNEPLFTLCSNPSMLWMICSSLMWGHYSREEVISSSESTSAIHTIFIMSAFKSIFGLGSSKYKRFKLKTLCTLAVEGMWKQVYVFDSEDLRRNKISESDKTVWLKMKFLQIQGNNIMFYHSTLQWYFATLFYFLKQDKDTYHPVIGSLPQLLGEIYAHKQNQWTHAQTFFFGIATKHVITLLKPCFGNISFKTIRQEIIRYLKSLSQPECNEKLVHPKKLFFCLIENQEERFVSQVMNLFEEITVDISDSDDLGAAEYSLLRASKLKNLHLHIQKKVFSEIHDPEYGSLENFKLDQKFSAINWTMLSILFCNLHVLDLGSCHFNKKVIEVLCNSLSPTPNMPLTVFKLQRLLCSFMTNFGDGSLFCTFLQIPQLKYLNLYGTDLSNDVVEMLCSALKCSTCRVEELLLGKCDISSEACGIMATFLINSKVKHLSLVENPLKNKGVMFLCKMLKDPSCVLESLMLSYCCLTFIACGHLYEALLSNKHLSLLDLGSNFLEDIGVNLLCEALKYPNCTLKELWLPGCYLTSECCEEISAVLTCNKNLKTLKLGNNNIQDTGVKRLCEALCHPKCKVQCLGLDMCELSNDCCEDLALALITCNTLKSLNLDWNALHHSGLVMLCEALNHKKCKLNMLGLDKSSFSEESQTFLQAVEKKNNNLNVLHFPWVEDELKKRGVRLVWNSKN", "length": 1004 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q675C0-1", "protein_name": "Taste receptor type 2 member 102", "gene_name": "Tas2r102", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPVIYSFATLLIHVEFIFGNLSNGFIVLSNFWDWVIKRKLSTIDKILLTLAISRITLIWEIYTWFTSVYGPSSFAIGMKLQILYFTWILSSHFSLWFATALSIFYLLRIANCSWKIFLYLKWRLKQVIVGMLLASLVFLPGILTQRTLEERPYRYGGNTSEDSMETDFARFTELILFNLTIFSVIPFSLASISFLLLIFSLWKHLRKMQLSSRGHGDPSTKAHTNALRIMVSFLLLYSIYFLSLLLSWIAQKHHSKLVDIIGIITGLMYPSAHSFILILGNSKLMQTSLWILSHLRCRLKGENILNPSGNQVTSCYIFCIANKSVS", "length": 327 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q68FP3-1", "protein_name": "C-C motif chemokine 6", "gene_name": "Ccl6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRHSKTAISFFILVAVLGSQAGLIQDTVKEDRPFNPTIIHQGFQDSSDCCFSYASQIPCSRFIYYFPTSGGCTKPGIIFVTRKRKRVCANPSDQRVQTCISTLKLGPRSGNSAIA", "length": 115 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6EKJ0-1", "protein_name": "General transcription factor II-I repeat domain-containing protein 2B", "gene_name": "GTF2IRD2B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTERGCAFVNARTDFQKDFAKYCVAEGLCEVKPPCPVNGMQVHSGETEILRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLELSNVGKRKIDQEGRVFQEKWERAYFFVEVQNIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQYTERMRDEKLHELKKGLRKYLLGSSDTECPEQKQVFANPSPTQKSPVQPVEDLAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFLRVEKSLKKFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPESLCAQKLKMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGLNYIPKIAELKTEFQKRLSDFKLYESELTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT", "length": 949 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6NXT2-1", "protein_name": "Histone H3.3C", "gene_name": "H3-5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSTPSTCGVKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 135 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6P3W6-1", "protein_name": "NBPF family member NBPF10", "gene_name": "NBPF10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRSLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASRSLYEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEAEKVLESSAPREVQKAEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTLVVDRESSHDECQDALNILPVPGPTSSATNVSMVVSAGPLSSEKAEMNILEINEKLRPQLAEKKQQFRNLKEKCFLTQLSGFLANQQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHAQERELTQLKEKLREGRDASRSLNEHLQALLTPYEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGSYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSQDRCYSTPSGCLELTDSCQPYRSAFYILEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAFDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEENHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGYLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELCDSCQPYRSAFYVLEQQRVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDKIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNGVLMEVEEREVLQDSLDRCYSTPSMYFELPDSFQHYRSVFYSFEEQHISFALYVDNRFFTLTVTSLHLVFQMGVIFPQ", "length": 3795 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6UGQ3-1", "protein_name": "Secretoglobin family 2B member 2", "gene_name": "Scgb2b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLALLVTGELGFQRTEACIPFFGVYLGILSGNRIGLHTELAPFDPTVEEKEAFEKIQDCYEEEGLKAKTEDMKLMTTILFSSECRSYYTKEVLKNILVKFSKKLTHGS", "length": 114 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6YCH2-1", "protein_name": "TD and POZ domain-containing protein 4", "gene_name": "Tdpoz4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGELEAKSRGDTQSHEQKLCYRWTISNFSFFVEETEEYITSLVFSLEDNDKMTWCLRVYPTGVDEKNKDYVSLYLILLSCEKGSVWAKFEVCILNAKGEKCNTERIPSFSRIQPHQPFGFEKFITRDSFLSPAQVLTPDDKFTLLCKVSVLQDSFSISGQNPRPAIKVTRCTLENDVGELWENPLFTDCSLLVAGHEFRAHKAILAARSPVFRAMFEHEMEERLTNCVEIHDLDPQVFKEMMGFIYTGKVPHLHSHSMACDLLAAADRYGLEDLMVMCEDALCRSLSVENAAHTLIVADLHSTEHLKTQALDFIIVYASEVSKTSGWMSMVESHPRLVAEAFHSLASAQRVFWALPFKQLKWSLRPTQL", "length": 370 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6ZMA2-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNCTQSPGFILLGLSSDPEKWQLFFSIFLALYLLGFLGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKMLEALWTGDGSISFSGCLTQMCLFGVFADMDNLLLAVMAIDRYAAICQPLLYPLLMTPCRCGVLACGSWGIAHCASLVYTLLLSQLSFHSNQEIPHFFCDSRPLLWLSCSDTHLNEFLMMVLSALLGISALLCIVSSYGCIFCAVARVPSAKGRRKALATCSSHLSVVLLFYSTVFATYLKPPSTSHSSGEVVAAVMYTLITPTLNPFIYSLRNKDVKNSLKKLLNMEKPLD", "length": 309 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q70YC5-1", "protein_name": "Protein ZNF365", "gene_name": "ZNF365", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MQQKAFEESRYPWQESFENVAVCLPLRCPRCGDHTRFRSLSSLRAHLEFSHSYEERTLLTKCSLFPSLKDTDLVTSSELLKPGKLQSSGNVVKQKPSYVNLYSISHEHSKDRKPFEVVAERPVSYVQTYTAMDLHADSLDGTRSGPGLPTSDTKASFEAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQEVQRRERALNRQVDVAVEMIAVLRQRLTESEEELLRKEEEVVTFNHFLEAAAEKEVQGKARLQDFIENLLQRVELAEKQLEYYQSQQASGFVRDLSGHVLTDISSNRKPKCLSRGHPHSVCNHPDLKAHFHPKGRNHLKKAKDDRASMQPAKAIHEQAESSRDLCRPPKKGELLGFGRKGNIRPKMAKKKPTAIVNII", "length": 407 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q71LE2-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "Q7KR10-1", "protein_name": "Probable cytochrome P450 12d1 distal, mitochondrial", "gene_name": "Cyp12d1-d", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MNTLSSARSVAIYVGPVRSSRSASVLAHEQAKSSITEEHKTYDEIPRPNKFKFMRAFMPGGEFQNASITEYTSAMRKRYGDIYVMPGMFGRKDWVTTFNTKDIEMVFRNEGIWPRRDGLDSIVYFREHVRPDVYGEVQGLVASQNEAWGKLRSAINPIFMQPRGLRMYYEPLSNINNEFIERIKEIRDPKTLEVPEDFTDEISRLVFESLGLVAFDRQMGLIRKNRDNSDALTLFQTSRDIFRLTFKLDIQPSMWKIISTPTYRKMKRTLNDSLNVSQKMLKENQDALEKRRQAGEKINSNSMLERLMEIDPKVAVIMSLDILFAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYYPNGFGTMRTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFNRDASRPFKTMFLMEPAITFPFKFTDIEQ", "length": 521 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7M715-1", "protein_name": "Taste receptor type 2 member 117", "gene_name": "Tas2r117", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKHFWKILSVISQSTLSVILIVELVIGIIGNGFMVLVHCMDWVKKKKMSLVNQILTALSISRIFQLCLLFISLVINFSYTDLTTSSRMIQVMYNAWILANHFSIWIATCLTVLYFLKIANFSNSFFLYLKWRVEKVVSVTLLVSLLLLILNILLTNLETDMWTNEYQRNISCSFSSHYYAKCHRQVLRLHIIFLSVPVVLSLSTFLLLIFSLWTHHKRMQQHVQGGRDARTTAHFKALQTVIAFFLLYSIFILSVLIQIWKYELLKKNLFVVFCEVVYIAFPTFHSYILIVGDMKLRQACLPLCIIAAEIQTTLCRNFRSLKYFRLCCIF", "length": 330 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7M719-1", "protein_name": "Taste receptor type 2", "gene_name": "Tas2r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCAVLRSILTIIFILEFFIGNLGNGFIALVQCMDLRKRRTFPSADHFLTALAISRLALIWVLFLDSFLFIQSPLLMTRNTLRLIQTAWNISNHFSIWFATSLSIFYLFKIAIFSNYLFFYLKRRVKRVVLVILLLSMILLFFNIFLEIKHIDVWIYGTKRNITNGLSSNSFSEFSRLILIPSLMFTLVPFGVSLIAFLLLIFSLMKHVRKMQYYTKGCKDVRTMAHTTALQTVVAFLLLYTTFFLSLVVEVSTLEMDESLMLLFAKVTIMIFPSIHSCIFILKHNKLRQDLLSVLKWLQYWCKREKTLDS", "length": 310 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7RTZ2-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 1", "gene_name": "USP17L1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHCKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEVQWYKMDDAEVTVCSIISVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q7TMR7-1", "protein_name": "Monocarboxylate transporter 7", "gene_name": "Slc16a6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTQKNSKLCSRANVYTQVPDGGWGWVVAASFFFIEVFTYGVIKSFGVFFNDLMDSFDESNSKISWIISICVFIMTFTAPLSTILTNRFGHRLVVMGGGLLISVGMIAASFSQRVYQMYISIGIVSGLGYCFSFLPTVTILSQYFDKRRSMVTAVASTGECFAMFAFAPAITALKEHIGWRYSLLFVGLLQLNVMVCGALLRPIIIKGPGSPKAIPLEPRREVQYMLENEKTRTSIDSIDSGVELTTSPKNVPSEAKREQEVRVEQQQTLVVGPKHSQKRAPLLDFSILKDRSFICYTLFGLFATLGFFAPSLYIIPLGISLGIHPDRAAFLLSTMAIAEVFGRIGMGLVLNREPIRKIYIELICVILLTVSLFAFTFATEFWGLMLCSVFFGSMVGTIGGTHIPLLAEDDVVGIEKMSSAAGVYVFIQSISGLAGPPLAGLLVDQSKIYSRAFYSCAAGMALAAVCLALVRPCKKGLCQNPHSGENQTDGHRGKALQDIPEDFLEMDLGKCEPRAHMKMDPV", "length": 522 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TN50-1", "protein_name": "Mas-related G protein-coupled receptor member B8", "gene_name": "Mrgprb8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQNSIP", "length": 328 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TPX8-1", "protein_name": "Oogenesin-2", "gene_name": "Oog2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNFYSPPTLMELARQCLLRDEYLAISALKDLPNMMFPVMFKEAFIDGHTKILTAMIPVWPFPYLSVGTMLKNLNLDTLKAVLEEIDILISKPVFSSRCKLREITLSHDLVVVWAGSHEVEGLPEFMEQEKPVENSPGYGTKNKLKVTTELQFMEGHLDECSTYLLQWAYQREDSIHLHCRKLKIYGLTKAAVIEMFKIVHAEYIEDLELSCLCLEYLDFLNPYLKQMSNLLSLTLDEIIYTLNIDDYRNLNEEKVITVISHLPTFHHLQELYVHGVIFIECLRCLKKPLEVLSFTDCDLSQSDLDYLPYCLNIFELRSLHLTDVRLSNLLLEPLGFLLERVRHTLKSLQLMSCEMGETHFNALLPALSQCYQLTVVNFYGNELSLLFLKKLLHHTAKLSQLADELYPAPQECYDNRDVVLSHRLENFCSELLDILRAIREPKKVTFGTIKCSKCGGSYVYDLETQCCFFEKNPPWA", "length": 476 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TQY5-1", "protein_name": "Olfactory receptor", "gene_name": "Or4k38", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEDSNRTVSSEFIFQGLCSSRQLEIFLLLPFSILYLMAVVGNLFVVILIIIDHHLHSPMYFLLANLSFIDFCLSSVTTPKLTIDLLKENKTISFVGYMRQIVCVHFFAGGEMVLLVTMAYDRYVAICRPLHYSSIMDRQKCIWLVVISWIVGFVHAISQMLLILDLPFCGPRVIDSFFCDIPLVMKLACMNTDTLEILINADSGILATTCFILLLISYTYILLTVQHRSKDGSSKALSTCTSHIIVVLLFFGPIIFIYLWPVSITWVDKFLAVFYSVITPLLNPAIYTLRNKDIKNAIKKLISHK", "length": 305 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TR72-1", "protein_name": "Olfactory receptor", "gene_name": "Or8k25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKYNLTIVTEFILVGITNHHEFQVPLFGLYLIIYLTSLVDNLGMIILTIVDSRLQTPMYFFLRHLATTDLGYSTAVGPKMLRNFLVDQNIISFYACAIQSSFFGMFIVCEFFILSAMSYDRYVAICKPLLYTVIMSQKACWILVTIPYLYSIIVSLLVNIKIFTLSFCGYNVISHFYCDALPLLTLACSNTHEIEAIILIFSAFNLLSSLLIVIGSYLLILMAILRINSAEGKWKAFSTCGSHLTVVIVFYGTLIFMYLQPTFTHSIDTGKVISIFYTQVIPMLNPLTYSLRNKDVKDVLKKPMEKVHNLFS", "length": 313 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TSF0-1", "protein_name": "Desmoglein-1-gamma", "gene_name": "Dsg1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWHSFRIAALLLTSLVVLEVNSEFQIQVRDHNAKNGTIKWHSIRRQKREWIKFAAACREGEDNSKRNPIAKIHSDCAANQPVTYRISGVGIDQPPYGIFIINQKTGEINITSIVDREVTPFFIIYCRALNAQGQDLENPLELRVRVMDINDNPPVFSMTTFLGQIEENSNANTLVMKLNATDADEPNNLNSMIAFKIIRQEPSDSPMFTINRKTGEIRTMNNFLDREQYSQYSLVVRGSDRDGGADGMSAESECSITILDVNDNIPYLEQSSYDITIEENTLHSQLLQIRVIDLDEEFSDNWKAIIFFISGNEGNWFEIEMNERTNVGTLKVVKPLDYEAVKNLQLCIGVRNVAEFHQSIISQYRLTVTLITVTVLNVVKGCVFQPGSKTFIVDSRMEANHTVGEFLATDCETGQATNKFKNVRYRYVMGNNPENLLVVDSGIITLRNRVTMEQYERLNKRYEGTVLSIHDSLQRTCTGTIIMVLCGFWTTTEHPTTSTEKPVTLSITPNVDNVHFGPAGIGLLIMGFLVLGLVPFLLISCDCGGAPGGGAGFEPVPECSDGAIHTWAVEGPQPGGITTICVPQMPPGNANVIEYIDNSGVYTNEYCGREMQDLGGGERTTGFELMDGVKTSAAPEICQEYSGTLRRNSMRECRDGGLNMNFMESYFCQKAYAYADEDEGRPSNDCLLIYDIEGVGSPAGSVGCCSFIEDLDESFLDTLGPKFKKLADISLGKEIDSYPDPDPSWPPQSTEPICPQHMEQLASGHPSISPHFGKTTVISENAYPSGPGVQHPMLIPDPLGYGNITVRESYTTSGTLKPSVHFHDNQQASNVVVTERVVGPISGADLHGMLEIPALRDGTNVIVTERVIAPGSSLPNSLTIPNPRETSNVVVTERVIQPTSGMIGNLSIPP", "length": 911 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q803M0-1", "protein_name": "Protein phosphatase 1 regulatory subunit 3B", "gene_name": "ppp1r3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPIELAMSLYLSSDEFLNPRASKYSRPLQPCLNQCKSSKLSFSSLKEQSEFNGVSRALMIPGRAKKHVSFADHKGLALTVVKIFSEFDDPIDIPDNIDNFFTSSLTVSEGKDKLTLDFDQPSADYLKFRQRIENDHVCLEHCMLKEKSIMGTVKVKNISFEKSVKLRITFNTWKNHTDVECQYVKDTYTGSNRDTFSFEASLPEQVPSHERIEFAICYEVNGDTLWDNNQGKNYRIIQSALRKSSNESNGGHQQYSQSDWDIHFDRYGSPRCSRGIFPHWPSYVGYEDIGPYY", "length": 293 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q80SW5-1", "protein_name": "Embryonic testis differentiation protein", "gene_name": "Etd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDEKNPEAVPRPPEQNTELVPPKKSKSKKPANILIYLIDRHLGRPRNDMDLFEWVWTLK", "length": 59 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VJ6-1", "protein_name": "Zinc finger and SCAN domain containing protein 4C", "gene_name": "Zscan4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSENDPREVPGLQSRQEQPISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VT8-1", "protein_name": "S100 calcium-binding protein, ventral prostate", "gene_name": "S100vp", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSTEQEIMELLMILQEFSVKKIDKLDVQEVKRLFREELPNFLKAMDEATKNKILNDKGKEMPFDEIWDMIGRMALEYRKKNSNALKD", "length": 92 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q80XZ1-1", "protein_name": "Polypyrimidine tract-binding protein", "gene_name": "Smptb", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRNSPPAAEGNGSKRFKGDSWGTRDPSRLVHILRLPSCVTEGEILCLALPFGEVSNLLFLRAKNQAFVEMSTEESANTMINYYTWMPPVLRGQPVHIQFAHYRELKVSSSPSQEISLSQAGDSREATASSLVAVPGQAAASGQTAVPSQLGAQPCLPPEDSYQAGTVALAPPASAVDTELVVAWQSPVLRILVENYFYRVTLEVLHQIFSRFGTVLKIITCTKNNRFQALLQYAHVMSAERAKLFLDGQNIYDACCTLRISFSGLTNLMVKYNNDKSRDYMRPDLPSDDSQPSPVQVQNMASALPAPAMSSASPYASIALPHTFAIPQAAGLANPEVFKTLHPQAIQEVAMASSSSSSSTAAAAVGAAEIAAAAVPGAEGSMVTSGSPGVGSPVLLVANLNQEKVTPRSLFILFGAYGDVHRVKILFNRKENALVQMADGSQAELALRHLNGHKLYGKALCILLSKHQSVKLPREGKEDQGLTKDYANSPLHRFKKPGSKNFQNIFPPSATLHLSNLPSLVSEEELKNLFSSNGYAVKAFRFFPKNHKMALIRMGSTEEAIQALVDLHGHLLGQNHHMRVSFSRMTI", "length": 588 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q810J1-1", "protein_name": "Pregnancy-specific glycoprotein 22", "gene_name": "Psg22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVSSELLSNGWTSWQRVLLTASLLTCWLLPITAGVTIESVPPKLVEGENVLLRVDNLPENLRVFVWYRGVTDMSLGIALYSLDYSTSVTGPKHSGRETLYRNGSLWIQNVTREDTGYYTLQTISKNGKVVSNTSIFLQVNSSLFICGRPSPPALLTIESVPASVAEGGSVLLLVHSLPDNLQSLLWYKGLTVFNKVEIARHRTVKNSSEMGPAYSGREIVYSNGSLLLQNVTWEDTGFYTLQIVNRYWKMELAHIYLQVDTSLSSCCDDFNSVQLRINPVPPHAAEGERVLLQVHNLPEDVQTFLWYKGVYSTQSFKITEYSIVTESLINGYAHSGREILFINGSLLLQDVTEKDSGFYTLVTIDSNVKVETAHVQVNVNKLVTQPVMRVTDSTVRIQGSVVFTCFSDNTGVSIRWLFNNQNLQLTERMTLSPSKCQLRIHTVRKEDAGEYQCEAFNPVSSKTSLPVRLTVMNE", "length": 475 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q863C3-1", "protein_name": "Gastrin-releasing peptide", "gene_name": "GRP", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRGREVPLVLLALVLCLAPRGWAAPVTAGRGGALAKMYTRGNHWAVGHLMGKKSVAESPQLHEEESLKEQLREYAQWEEATRNLLSLLQAKGARGHQMPPWEPLSIHQPAWDSEDVSNFKDTGPQHEGRNPQLN", "length": 134 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q869X2-1", "protein_name": "Probable polyketide synthase 17", "gene_name": "pks17", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTFNNIKDENNDDIAIIGMGFRFPGGGNNPYQFWNQLSNKMDGISKIPTEKWSRSFYEQKYINNEYGGVLKDEEWKNFDPLFFGISPKEAPIIDPQQRLLMTTLWEAFEDANIKPSTFRGSDTAVFIGMMNTDYQRCQFRDISYVNPYITPGTAGSFISNRLSFSFDLRGPSMTLDTACSSSLNAVYLGCQAIANGDSKMAIVGGVNGIFDPCFSMTFSGLNMLGHKGQCRSFDAGADGYIRSEGGGVCILKKYSDAIKDGDRIYCVIKGGSSNVDGYNAKTNIIQPSMKAQGENIEIALKKSGVNPSDIYYIEAHGTGTPVGDPIEIEAISRIFKDNHTPDAPLYIGSVKSNIGHLESAAGIASLIKVALSLKNRSLVPNIHFEKPNPLIKFEDWNIRVVTDEIQFPINKLINMGINCFGLSGSNCHMILSEAPINYDELLKTTNNNSTSSSSNDDKKEYLIPFSANCNISLDKYIEKLISNQSIYKDTILFKDFVKHQTISKSNLIKRKVITASDWDDFLNKRNETTSTSSLTSTISAPASSTPVIYVFTGQGPQWRDMGKALYETESVFKDAIDHCDKLLANYFGYSILQKLLSLESEDSPEIHHPILAQPSIFLIQVGLVALYKSFGISPSIVVGHSFGEIPSALFSDVISLETAVKIVYYRGLAQNLTMGTGRLLSIGIGADAYLEKCALLYPEIEIACYNDPNSIVITGSEQDLLGAKSTLSAEGVFCAFLGTPCSFHSSKQEMIKEKIFKDLSDLPESNVPCVPFFSTITGSQLSHKGFYNVQYIYDNLRMPVEFTKAISNIFNFIEENESYKNAIFLEIGPHPTLGFYIPKCKPSNSTITSKPIIVSPLHKKKEELTQFKLAISTLYCNGVEIDFASGQQLLPTSSSSGGGDISSFKESTNKLPRYQWDFEEYWDEPNQSKMVKRGPSNNLLGHDQFAGNTLMELFIDIDKSAHQYLKGHKIKGKYLFPGSGYIDNILRQFNGQDITIFNLEFSNPFFLKDGVQHHLQTSITPTTKGEFKVEFFIKDNRNSTKWTKTSNGRIGLFKHNPKNNKLDIEKLKSQCSFTTLTKSEVYNKLLLLSLPYGPTFQRVESCSIGDGCSFFKLSMSPCSEFDKDFLNPSIIDCAFHGLLVLSEGPQEIVFDRLQDMKFYSSNVPSTRPQFIYAFAKFDKIEGNSTHGSLNIILEDGTLLISIKNVKCTSLIRLKKQSIKYPSQNVYSHHWQSKDSPLTLIENQLIEEKSSESKINFEKLLNDKLFNYYLIRLLNQSIKSEFIEFDYKTSTVDTLDIGSKNAKLLEKIQSILNPIDSLDQSIDITSLKQAIIVKSSFKNEIKLVEKSIKRIVSLLKGGESEHFSPSNPSSPNDTPRNNSNNCSSKNNAASSDDADDDTNNEETINQLNNEPFNFSNSQFISNQNQLISKTIVNSFDRLINSIEIGEKKLIKIIDLSSIYQNYQLSKLLLLQLNQLLINLSNNNNIEIEYTIPSNTKNIDSITEETKSISNVLNIKYRSFDLQDDLESNGYLNSNYDLIITSLLLVSTNSIDSNEVLSKLYKLLLPKGQLILMEPPKGVLSFNLLFANDFKQSLEIKSEQEIKSLIIYCGFTKIETNLNTKDDEEQQQPPPPSILIVQAEKRDIESMSLTFSSDPKSLNSSYSNCIFIVSKEQKENPTSYIQEYFDITEFFCQNATIIEADDSELLTKTIESGVGKNDIIFFLVSLEELTIENYKQVTMQYTLVNQILLRNNLSTRFALLTYDSQNGGKNYLGSSLIGTFRYFLEFRSLNIFSIDVDKDSIDNLTLFLRLVDLSTIGDRETIVRNNKIFVQKIFKEPKLLSPSNNYEKNTNNLFLYSNSNLDFSFQSKEKLLHGCVEIKVMSTGINYKDSLFYRGLLPQEVFSKGDIYSPPFGLECAGYITRVAPSGVTRFKVGDQVVGFASHSLSSHVTTHQNKIVLKPENISFNEAAAVCVVYATSYYSIFHIGAFIADKESILVHSATGGVGLASLNLLKWKRNQLKKHGNSEISNDASIYATVGSKEKIDYLQEKYGDLITAIYNSRDTEYCDEIKQQSAQGGVDLILNTLSGDYLSSNFRSLSQVGRIMDLSVTQLVENDSLDFSNFKYHVGYNTIDLDRATKYNSKIIRDILTEVFDAISDGSLENIPVKVFPAIQVKTAIEYINERVHIGKIVVDFENFEQDILKPALQEKENPIQLNKVKKLEHTCDTLNNTILITGQTGIAVHILKWIISGSVLNSNKSQQQVTDFIILSRSSLKWELENLINQTKHKYGDRFRFHYKSVNIADLNSTRTAIDQVYSSCKNVSPIKSVLHFATVYEYILPENITQTVIDNTHNPKAVGAINLHNLSIEKDWKLENFILFSSIGAIIGGSKQCAYSSANLVLDSLSNYRKSIGLASTSINWGGLDAGGVAATDKSVASFLEGQGILLVSLSKILGCLDSVFQPSNSHLSNFMLSSFNIDNLLSSAPQMKRKMDHHLTNYKTSSASSDDSLGDSGSTQAKVISTISELLSIHPSKLNLDTRLKDYGIDSLLTVQLKNWIDKEFTKNLFTHLQLSSSSINSIIQRISSKSTSTSTPNPTNTSKQTATKKT", "length": 2604 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q869Z5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSHLTPKPNVLNVYGAGTPNFVKVQILLEEKNIPHVYHKIDFSKNEQFDPEFLKFSPNNKIPAIVDNTVEPNGISVFESAAILMYLSEKHQFTDLYADFKTDPALHAKHLEFLFFQMSGVGPMTGQLGWFLRQPEPKNTQAIERYSEEVKRLYRVLDKILSTNTWVAGEQYSIADISLLGWALYFLKGYYDDHITREQFPNVYRWLDLAAKRPAIIKVLETIQPKQK", "length": 227 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AE3-1", "protein_name": "Probable polyketide synthase 9/36", "gene_name": "pks9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLKNINLKEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFKEWKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHTNKHQDSVLKNAIAQSTSAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVDIIKAYSILSMLSKTHGKCKTFDESGDGFTRGECVGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNFLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTTMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNEIVFIEIAPHPTLLFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQSINLPLYQWDEELYFTQAQTLEQHRKEGPPIDHLGTSNSYNSPFNNSYRTSIDIKNKPFLYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPPKYNIKEIIENKCNLSKLTKNELYTHIKSKTGLNYTGVFQGVTECYIGGDCTLSVVSLESQTNSFLNIPILDTCLHGMIGLSNDQCQIVFDKAIGFKYYSSNIPANLKDYKDSVYVYSHLKSKSVDSFFGSIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNEVIIKSSRIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCRYLRKKNQMISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIIALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGFNVIYRPLKIDESLIETQSINPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCSMSQQSWCQLLKTCNFKDIAMSKECIFVGIVIHAQKPPISLLNSQPKRDNIIIYGGGNPIFVENIKLYSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNFKQITLEYIEINRKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLNTLDFDYDSTQNYINSNNKDMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNYKKIQIKPSNLSHNEASSIPIDYLTSFMSLFNIGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFNSNLFVTVNSYETKRYLQDNYGDFITGIYSNTDKSYVTEINKKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLAKYGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFELSLIQKNKIHKCLYEISNAFENGELKTIPIKEFTNLNIKDAIKYITNNKIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILVTGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINETKLSNNNIKFHFKSVDIGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYVCANALLDSFSKYRESLGLPSTCICLGAIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNAGKFTNSMLSNFKPSKFKNNQQTSLFLKFDYLMNLKNNSEETKIENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTISTSMKMILNSLMKNNQNIDDNNKDLPSNRIDYWKNEMKFEESIKPISNEIQSRNNSEKIILLTGTTGFLGGFLLFNMVRLDSCKLIYCLIRNKSKSNNPLDEIINNLKYHQLYEKLNQSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKKYNIPSILIRPPSIFLNPETGIGHISDFSLLSIQSCYELGYYPNQFENDFILINTITWLSNNITNIIMNDNCWTDSKMNIYNVHGKQIQSSLIIKPLEKHFNCKHINTNDWIDMVNNSNKKSCIKLKSFHSLDIILKSENNRYKPNENQSISLSTKSLLESMGSYNTDLEITDKMIISHINQIFNLNETI", "length": 2931 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AF8-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFSKFSIKENKPKKVKSNSSKGFNNNEINSTNNNNNNNNNNNNNNNDSDNFINNNDSNNNNNFNNNNNNNSNNINNKTEDSNDISLLINQFIGSSPAPSTCSGSDKFSIKPKKIVTPSKRKNSTSGSDIIDFNNCNNNNNSKSNSDSNNNKYNNSNSNNNSCNNTNNGNERKMKGYDYGNNNSNNNYSSSSRDYNSNNNSSPRDYNNNNNNNNNNNNNNNNNSNNNSPRDYNNSRDYNNNNTNNNSSPRDSNSNNNRNSSSRDFSNNNSSPRDYNNSRNSNNSFLNNNNNNNNNSNNSNDNSPRDYNYSSSNSSPRDYNNNNDTFSKKRNNVGNSILEIKSNPTSPRIKPIMVWPRSSPRIVNKLPPVQSLVDLTEIEMIDDNNNNNNNNNNNNNNNNNNNNNNNSNNNNNKSGSNNNFSDSDSDKDNYNNNNNTNNNSFNSDSDNYNNSNNNNSNSNSNSNSNSNSNSNNNNNNNNNSNNNNNNNNNNNSNNSNKSNNNFSNIKILEKRRKSINEISDNLTTRNIEEIDSKMAHEFEHPFLEKLIFAGQRPPFVECDDYFLKRYKNQFQYYLDISMKSIINTRDIGEGDDDDEINSVPFKCTLCSYEYDEENNNENTNGFIDEADKIYNRSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNSNNNNNNNFYDKKYFKNNYFQHLLSKHLNQIKAKGIQDTNVYNDEANIPLGSKKCDHLECSEIILKNEFTKHIKKLHHHHKDEDIDICPRCKILKKSIQKRIVKFSKKKQEKDDDNNSKPVSNKVATISHNPSPNNIDKDINNNNNNKNNKNNTNNLENDNNDNSSNNNYLENEEEPEIVFQDIKPNNNNNNNNNNNNNDDNNNDNNDNNDNENNNDNNNDNENSNNNNNNS", "length": 901 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86BK9-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 22", "gene_name": "Dmel\\CG32971", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSDSKDEALLKSFKTQLKDNVLSMLLNFEELLKLVSPRTPGQITNDTEQELNAFEMQVRAGNFVRAGEALIKLVHDVKEYQIIYDYSNIEEEMDRQSEAMHAKVTEYDQTLIKMVKDLEEELSELEYEYYEKSGGPDLDSKDLLV", "length": 145 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q86IJ5-1", "protein_name": "Uncharacterized protein DDB_G0272718", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPPHGHHHHHHGHHGHHEHITITPVYAPPQVVQPIYAPPPVVQPVYVQPPVVYPQATIVLETGHHHGHHHHHGHHGHHDHHHHGHHGHH", "length": 89 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86IV6-1", "protein_name": "DNA replication ATP-dependent helicase/nuclease DNA2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNFFEKKNNNNNNSSNNNNNNNNNKNNNNKNLDKNNSSDRNNNNNGDKNNLKPTQKSLIDLWFQVDDEDEEYELSSLSNDGGSSFNSFKVNNRDTSIGSDIYSKTITPSSLALSTSSLISSTLTPPTQSPPFSKKNEKTSSFLNSPSSQKSKSNNSNVKEKLSPQYSSSSQLSDFFKKKKRPLLDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTISSLNTNSNNNSSGSSNGSSSSSSGGGNKSSNNKKQKVSQSTSSTSLKEKQSQQSILSYLNPTPSLPTPIFDKPIERSDSNLATSSFSKLNFDDIPLDDEELSQKINTPSPKLILKNTFSSTPTQKSPSLSSTPPNKIKITDKKLPNSSSSSSSPPPSSAKSKLSHRSQSSPLSPLITNLNQNKSNEFDDINFNFNIPSPLKEINNKPNIKSNSKETLTPLTQIFHSSSPPPSIIIESSPSVCFSPTPTKNQSPTLSNLSPTFSFLSDTSPVKSPSQLFEFTFDDPLSPKLISSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNTFISKNNLINLFNEQSNQENVSTTTTTTTTTTTSTSTNNNNNNRYERVLIINVFYEVTQIFNNSNDKIHKKTLSGFSESIGESREIQLLDEWIYTPVRPGDIVNVIGEFDDNGEIIINNIQNLLILHPDILITGTELGGSLTCTRRSVLKEQIRVGNSNSSTVPIFGSIVHEIFQECLKNNRFHLDDINTFKQEIIGKSTFQLGLSSLGETQDTALNHLENWLPTIDKFAKTFILPSSSSSSASSLKKNLIEINSEKWHLSISKILEIEENIWSLMYGLKGKIDSSLEIKLVKQQQDEKQSKQSKQSKKKKQQTTSPNNNNNNNNNNNNNNNNNNNNNNNNNNGPTTCYLNVPFEIKTGKPYQIPYISHSSQVLIYTLLMNDRYDQDIEMGILYYLKSQEFKSVGLNYGLLHPILFERNQIRSLIVSRNLLAYFLNLNSQPLLKPNPILPEMLRDYHSCTKCYSIDPCVLYHKAIENGDQFTSSLGDLFLEKTNHLSSIHINYLKNWNKIISLEYSIKNNKRKLIWNKSRKFGEKNNSCIGELILISEEYSEITETFSYRFRVNPDKLLNSSISEGDYLLISVEDKYYGMGSGQLSNIINDIITITCREKLSEPPSLLSDYTTPNCNNNDPSYFGNYRNKPLIYIEYEDADQQQQQQQQQQQQQQQQQQQQQQQSQKQQKQKQPNFTQLRGLNNYVNNSKLTPFKWRVDIDEQLSGLSIVKSNLFNLFLKENQKLRSLIVDLEAPIFDKLEQENYWKSIDFQNDYPLLNIDQRNAIIKTLSAKDYSLIHGMPGTGKTTLVISLIHILWRLGKKVLITSFTHTSLDHLLLKFNKQYPNIEMLRVASSLNQIDPSLHRFTLEKQSFGNITQSKQYLERQQLVATSCLGINHQCLLKMQFDYCIIDEASILSQPISMGPILKCKSFVLVGDHHQLPPIVNNKEAGKLGLDISLFKQLSTSHPSSVSNLYHQYRMCNSIMSLSNHLIYNNRLVCGNQSISNLSLQTNYYHNNNNTTHIDLLDHINNWPQIICNPNSSVIFVNTDQLNNSTESSNGDLFYNQTEANIVAILTNCLINKLNINQSQIGIITPIRFQLNFIKKSILKYLSIENNNNNNNNNNNSNNNNNNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNQNNNQNYLKKIENLDILTIDKFQGKDKDCIIISFVRSNEKKEIGELIKDWKRMNVAFTRAKKKLIFVGSKSSLSKFPFFLDFFEFLDSKNWIYNLNNKIQF", "length": 1838 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86JI5-1", "protein_name": "Probable polyketide synthase 5", "gene_name": "pks5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDMKLNDIENENFINQMKGVAIVGIGFRIPSGNSENSISSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSDAHHIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHANKHPDLILKNAIGFSPSTLSNRISYCFDIHGPSLSIDTACSSSMNAVTQGYHSILNGTSNMSIVGGVNFVIDVETIKGFSYLNMLSKTHGKCKAFDESGDGFTRGECAGVVVLKKLDDAIRDGNRIYCIINGISSNIDGNGIADKANFYSPSKQSQFNNINLAFKSTNGKISVNDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVVSLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRNNEKSVSMMINNFGVTGSNCCLLISEFKKQDYESYENNIGSINKNILVPFSANSPKSLDQYQSKIKNIINNQFNFIDFANNQIYSKSNYLYQRSVVIANNSNDLVNKILNKKHIQTKNPIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGYSVLEKLRSIGDDDTTSIHDPTIAQPAMCMFSVSLFELYKHWGVNPSFILGHSLGEIPTSYCSGMIDLDTFCYTVYQRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESKKSKVPTFSTVTTNLFNESDPFNSQYVYDNIINPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQKINLPLYQWDDELYFAQTQVLEQHRKEGPPIDHLGLSNSYYSPFKNSYRTFIDIKNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHTIEMPPKYNIEEIIKNKCTLARLTKNEIYTHIKSKTGLNYTAMFQGATECYIGVDCTLSVVSIESQTNSFLNIPILDSVFHGNISLINDQCQIVFDKVHGLKYYSSNIPNDYKDKSVYVYAKLKSKTSDSYSASFTVLLSDGTVVYEIDEAFSKSLIPIKELLKIEYPNDELFSINLQPKDSPIPAPSTFKSLIYENDRFNAEPPMVENLFQYISTIFYKNIINRCPEINIDIIKSLSIDEIISNFSKISKHERLFKYVFETIKENGILNSLEEKDDTYFVFNEVLIKSSRVISKLLFPLENDNDNEDTPQLLFQNGLMDKVYKCRYLKNKNQMIAHIIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIVDTKNKINKIIKGAGITNGLNVIYHPLTIDESLVELQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLIPNGQLLFVEPPYKSIICDSLFGSFEQWWAFTDTDIRKDHCCLSQDGWYKLLKWSNFESIEMSTESKFMGSVIQAQKPSFTSLINQQPKYDNIIIFGNNCPNFIDNIKPFSNFNEFIQIETIQEFDQLINKSTITNDSIIYFIKSINQLSLDNYKQATLEYIEINQKLLQINSLCKHVLIVNDSRKTNYLASSIVGAARYFDEFQQLKLHTLDFDYDSTQNYLISKNNKMVQFINNLIDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFEQQDNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINNKDYLVYSGLEGSVNSNTPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSNIIVNHERIQIKPSNISHIEAASIPIDYLTSFMSLFNVGCLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVNSDEIKQYLLNNYGDLITAIYSNTDKGYVSQIKNKLIEQGSNDNGVDLILNTLPSDFMDSNFQLLAINGRIIDLSNDHLNQSEYMKNVNFTLNRGYHNFDLMSQRNSRINRSLLTISKAIENGELKLIPIKEFSNSDINDAIEFIIEENRIDKIVVSHDHEVYQELYAKFSNENDFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQEIINIHSIFHFAFTQIACKVQEINMKHLDISHGAKTMGAINLHNQSIKRNWKLINFVISSSIASLVGSTDQCSYVCANALLDSFSKYRVSLGLPSTSINLGAIESTGFVSKNESISVFLDGSGIIPTPINQVLGLLDLQIQNPGKFTNSMVAKFNPLNFSNNEQINLLLKMDYIFNLHSNGYTKVKESAGSKNVDELFIKKISDLFSIDESKINKDIRLIDYGADSLVIVQLKNWVDQEIGFNLITIQQLQNNTINVSIKIILNFLKKINK", "length": 2512 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KS1-1", "protein_name": "DNA cross-link repair 1 protein", "gene_name": "dclre1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDDEDDINLYITRSKNNENKKTNKNRLIDNNIQKTKTTTAVLTTRTTTTTTTTTASTQLKWDYGDEDDDDYSAPKDIDEEQSSKQFNYQNNQIVVKQDHDDYSAPKDMDEEQSSRQFNYQNDQTLVKQDDDHDDYNEPKDIDSQSLIDEDCDFEFDNSDFFFDDGTTNNNDNNNKNNKNNNNNNNNNNNNNNYNNNNNKNYKRKYYQSYNNSNNINNNNNNNNDKFEKRLSDLKKTGKEEAKKRGYQVRKTPTKEKKIPPSFKVIDGTNFLVDGFQYKSEDFTHYFLTHFHSDHYVGITKTWSFGNIYCTEETGKLVSHKLGVDQRYIVKCEWNKLIEIQGVKVAFLDSNHCPGSALILFIIPLRNKDGEIIGEESILHTGDFRYNQSMNNYPLLKGRTISKLYLDNTYCDPQYVFPPQPEIIKQVASIVRKENDGETLFLFGTYVIGKERILLEIAKQEGKPVHVSNEKYAILCCLSTCLDINKFTTNELITPFRAVTMSMLSYHNMLSLLDSSNNKYKRVIGFRPTGWTQAKKSITYLNRGPTTFYSVAYSEHSSFNELRDCIDHFRPTQIIPTVDCDSPIKVKNILAHFSDLYEKKKQLTIASFFSAQPVTNFFQSFFKSKSEPIIDEDNKKLIPITTTTTTNINTLTATDTTTTKIKTSNTLIKDEFTDDLIWDCSDDLISDRKLLTQSDNSSALCKIEKEENFNDLSENNNNSNNNNNNNNNNNNNNNNNNNNNNNNNKLIIENDIKEEIIDFDDPVFISQQKWIEKQIYNNNNNSNNNNFTTPTKTNGNLSNNAKLNLTPTQTQTQTPTQNNKKQKTTNVSPTSYNSNNSSQQSGLKRSKSDPNVKKNQLQTSQPPSQSLITSFFQKCASPTSLFSATPPTPSITTTSNQSTKNKNSTTTTSTSTSNNKPFKN", "length": 920 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KX6-1", "protein_name": "TNF receptor-associated factor family protein DDB_G0272348", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFELEDITIEQSSFTNNNSNNNNNNNNNSNSNNNNNNNNNNINNNNNHNNNNKNNSNNKNEINNQLDIPISNLVVDKENISKKYFCTICSDLLVNSFHADKFKAVQCKNGHYTTCLNCWEKHLEKKKNCIQCGVDVESIESLSSNLLVTQKFTTFKIHCPNSFFDTIDFIKDEVNGCKEIIQINELEEHLKECQYGFISCKNCEEFSKLPFQEFTQCPDFRKNTKEQHDLICPYVKISCEYCGDIINKINKESHNANWCQEITIKCLDCHLPFKKKEINQHQKSFCPETIIQCRYSKGGCNAMIRRSKLSQHLTEGDNHHQFISNILNQQDLKINELELKNTEFCLLLNGQNKKITELEILFKELNDSILIQKQQQKQQQQQQQQQQQQQQQQQQQQQSQQQQSQQQQQSQQQQQSQQSQQNNNSNSHFINNNNNNINNVQMSDSPNGGSLPQAVYKNKWVISNYSEQEQQGISKDYIKSPLFKIGNSTFFLKWFPFGKKKLNYCSIFLYKTQDDKSIIVNYYIHLVNNQISDEVYEKRGCQKYDSENGSAGYGSSQFIKRADLLNDANGFLINDSITIEIEIFATEEILPLQS", "length": 595 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8BI41-1", "protein_name": "Syncytin-B", "gene_name": "Synb", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTGFWVLCFVLFPSSLSYPESWMPLVNLTHHILRDTNSSLFSNCWVCLSTQTQRSLAVPAPLSIWTDTPMKLHLTYSVRPFSGSFSISDIERRLRLFRPLTASYSFHNPDRRAIAFLQLVSSTGIFRIITRITSVIYPHKDRFFESAQRPLWGPLFTETVLRSQAPLCISRFFKVSAYATFVGNLSASLCNYTMHISPSTSHENLDLSTTHTFKQAMKRPDAKWKNPLRFSGPPSLIFSKPAYYPCPTDIKHCHTSPATPWMHCPQAPFGTCYNLTLFEPDNSTHPVTMSVNPTHFKVKLQGHRDPYPLSHYQPLTGAALSGQYSVWENEITVQENWDITSNIFSHLLSFSYAFCLNSSGVFFLCGTSTYICLPANWSGVCTLVFQYPDIELLPNNQTVPVPLFASVLSSDSVLRPKRSPHLFPFLAGLGISSALGTGIAGLATSTLYFQQLSKVLSETLEEIAASITTLQNQIDSLAGVVLQNRRALDLITAEKGGTCLFLQEECCFYVNQSGIVRDAARKLQERASELGQHSDSWGQWPDLGRWLPWLTPFLGPLLFLFFLLTFGSCLLNCLTRFVSQRLGSFVQDTAKRHVDSILQNFQYKKLPQDSPDEDTIPT", "length": 618 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BYG0-1", "protein_name": "Tetratricopeptide repeat protein 24", "gene_name": "Ttc24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSSRQYGLSDVLRALEESRKLADADRSTDQGLLGPFYNDLGMGYFQLQLFPLAVEAFLQALPLCRQPSEQATVLQNLGMTHNVLGNYWEAQEFHQKAASLHGSVGQRWEQGRSFSGLAFSLSQLGDHRAAWDSYLHALQAAQDTGDVKGQWQACEGLGAAAARLGQHDQALKYYKEALALCQHEPSSVRERLVAKLADAMRTFVAQEKIAQARFLPSAPGKLQTSRKAKTSARVQSSAEDAQESQWEGEASEGGHEKKEMEGLVNTATVLGPQRQNRATTHLPSGGPSPSGEEYPFIIAPKKLRVSRSSTWAKEALGRNFQRTRIQSGLCSIM", "length": 334 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1N8-1", "protein_name": "Alpha-defensin 22", "gene_name": "Defa22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKKLVLLSALVLLAYQVQTDPIQNTDEETNTEEQPGEEDQAVSVSFGGQEGSALHEKLSRDLICLCRKRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1P2-1", "protein_name": "Alpha-defensin 21", "gene_name": "Defa21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALILLAYQVQTDPIQNTDEETNTEEQPGEDDQAVSVSFGGQEGSALHEKLSRDLICLCRNRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C5Y2-1", "protein_name": "Mitochondrial sheath formation-associated protein", "gene_name": "Misfa", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVLGWMLFVGLATYMGTFPEAMPPTLKWKERLPGQENKARRRIQALEEELLL", "length": 53 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CDW1-1", "protein_name": "Protein FAM228A", "gene_name": "Fam228a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADTKTSKCDEHFSVEKLKEWPEPESVSLMELLAREDIDEAVHAVLFRENYVVKRLDTYLQHLAVFKERRKEMLHKKWVENVVQPLQQRITDKITSYRRPGKNQVKYEHCLKQTNKPTKVSSSCLFQKQQEFREAKGTSYQHGRGKTHDTQKEAKETEKGLSFTPFSLRPHCSSPRERQRASARLMQSKPGGRNRYKGASSEKPVFTLKSHLPKEEKTVSRSQLVFERQFRASRLSQDIKEAEKKGLVVGTGPQRPRSWAAADSVPRPSLVGRRVMTAEILGEHLVSLHQAARSGLQWP", "length": 299 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CEK3-1", "protein_name": "Serine protease inhibitor kazal-like protein, minor form", "gene_name": "Spinkl", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSTWIKFLFILTLVLLPYSVFSVNIFAGPENVIKEPNCTMYKSKSECSNIAENPVCADDRNTYYNECYFCIEKVVEKLKYRYHGICIYK", "length": 90 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8K072-1", "protein_name": "Receptor expression-enhancing protein 4", "gene_name": "Reep4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVSWMICRLVVLIFGMLYPAYASYKAVKSKNIREYVRWMMYWIVFAIFMAAETFTDIFISWFPFYYEFKMAFVLWLLSPYTKGASLLYRKFVHPSLSRHEKEIDACIVQAKERSYETMLSFGKRSLNIAASAAVQAATKSQGALAGRLRSFSMQDLRSIPDTPVPTYQDPLYLEDQVPRRRPPIGYRPGGLQGSDTEDECWSDNEIVPQPPVRPREKPLGRSQSLRVVKRKPLTREGTSRSLKVRTRKKAMPSDMDS", "length": 257 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8MP30-1", "protein_name": "Uncharacterized histidine-rich protein DDB_G0274557", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKYFLVLLVGFLLVLPSIVNPYRKGVTITNQQPKINIYQLDVNNPHNPNNNPHNPHNPNNNPHHPHHLHHHHHHHHHHHHHHHHHHHHHHHHHHPHHPHHHPHHHHHPHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHPHHHPHPHPHPHPHPHLHPNPHPHPHPHPHPHPHPHHHPNPNPHPHPHPHPHHHHHHQEASECLSYQGNRNRLFIKRDY", "length": 233 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8NG83-1", "protein_name": "Olfactory receptor 2M3", "gene_name": "OR2M3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARENSTFNSDFILLGIFNHSPTHTFLFFLVLAIFSVAFMGNSVMVLLIYLDTQLHTPMYLLLSQLSLMDLMLICTTVPKMAFNYLSGSKSISMAGCATQIFFYTSLLGSECFLLAVMAYDRYTAICHPLRYTNLMSPKICGLMTAFSWILGSTDGIIDVVATFSFSYCGSREIAHFFCDFPSLLILSCSDTSIFEKILFICCIVMIVFPVAIIIASYARVILAVIHMGSGEGRRKAFTTCSSHLLVVGMYYGAALFMYIRPTSDRSPTQDKMVSVFYTILTPMLNPLIYSLRNKEVTRAFMKILGKGKSGE", "length": 312 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8NGV6-1", "protein_name": "Olfactory receptor 5H6", "gene_name": "OR5H6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MFLYLCFIFQRTCSEEMEEENATLLTEFVLTGFLHQPDCKIPLFLAFLVIYLITIMGNLGLIVLIWKDPHLHIPMYLFLGSLAFVDASLSSTVTPKMLINFLAKSKMISLSECMVQFFSLVTTVTTECFLLATMAYDRYVAICKALLYPVIMTNELCIQLLVLSFIGGLLHALIHEAFSFRLTFCNSNIIQHFYCDIIPLLKISCTDSSINFLMVFIFAGSVQVFTIGTILISYTIILFTILEKKSIKGIRKAVSTCGAHLLSVSLYYGPLTFKYLGSASPQADDQDMMESLFYTVIVPLLNPMIYSLRNKQVIASFTKMFKSNV", "length": 325 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8R264-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r215", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNWNNIIHTIIFLSLTGPGIVGNMLIFIRHIYMPALGTEKKPVDLIVIHLAFSNMITICTTGIKDIATVFYFRNFLGDIGCKAVVFLARMARGLSICTTCLLSVVQAITISPRTSLWTKLKPQTACQIIPFILVFWIFNGLISSNLLSYIKGGSSLNRSVAATFIGHCYMLQSRHTIKWIFLSLMTLRDVIFQSLMGWSSGSMALNLYKHHKRVLYLYSSRFANNSPPEIRATWSVLILMTCFLLFYWADFILSFYHGFTVTHESILLNIKVFLELGYVSFSPYVLISRYIHPPNVFHAH", "length": 300 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R272-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLQFIKKTIFLFMTMVGILGNMSVSVHYMFSWWGSPEKKPIHLILTHLTFTNIILLLAKGLQKTIIVFGLRNFLDDIGCKIIVYLERVARGLSICTSSVLTVVQAIIISPRASGWRRLRPKSAWHILPFFSFFWILNAFISVNLIHSIRSKGMNTSQHKNSDDYCYLTPESQKIKWIVLPLMVLRDAVFQGAMGGASGYMVFLLHKHHQHVLYLQNSKLLYRTPPELRAAQSVLLLMLCFLFFYWTDCALSLFLSLSLGDSSLMINIQGFLTLGYAIFSPFVLIQRDGLIPVCWHAQ", "length": 298 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R278-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r213", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLALRNYIQINTPWCMCLFVTPLTPCLPEYWDPDSLRVEGPTESSLRHNTASCTLKNTIMQNVQFRSMSSITDAFFKMYLHTRKEEMILKILKEITFLIMTVLGILGNMSVSVNYMFSWWGSPEKKPIHLILIHLIFTNIIILLVKGLPKTIAAFGLRNFLDDIGCKIIVYMERLARGLSICTSSLLTVVQAIIISPRASGWRRLRLKSAWHILLFFLFFWILNALISVNLIHSTTNTRLNVSQLKSDDNYCYFMLPIQKIKWIVLPLMVVRDAVFQGAMGGASGYVAFLLHKHHQHVLYFQNSKLLYRTPPELRAAQSVLLLMLCFVFFYWTDCAFSLFLTLSSEVNILMVNTRDFLTLGYATFSPFVLIHRDGLLVECRHVQ", "length": 384 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2A9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r229", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDFGNLAMGIVLSLQSALGILGNFSLLFYYLVLYNKERTLKIIDIILIHVFTSNSLIIFSKGLPEVLAVFGWNDLFDDVGCKLIMYVRRVSRSMSISMTCLLSVFQAITISTRNSCWKEFKEQTAKFMGLFISLCWILFMLVNMLFPVYTSTNRNSKNKTQKKDIEFCHSVGRDKMVDIMYTAFCVFPEVLFSLLIVSSSTTMIVILYGHKKRVQHILHTHASPRTSAENRATQTILILVCTFLAFYTLSSVLQGYVALSHDPSWWVMNITTIISMGFPAIGPFVMSRDFTVSRFCFTCIGNLKLP", "length": 306 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r178", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHDKSLKTTDDMTLQILLLCQFVVGTVANVFLFLHNISPVLTGSKQRPRQLILSHMSVANALILFLTSFPDMMAFAPRNSPTHLKCKLEYFSRLVARSTNMCSTCVLSIHQFVTLVPVNRGKAILRASVPNLTSYSCYSCWFFSVLSNIYIAIKVTGPQITDNNTDSKSKLFCFTSGFSVGIFFLRIFHDGTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNFICIIFYTFSIDSRLFMSHFSKVFAAGFPTISPLLLIFRDPKYPCSVLFNC", "length": 304 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r64", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKTLKTMEVLALQILLLCQVVVGTVGNIFLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLFAYSYDLIDFVPRKPPTDLKCKLAYFFNMVAQGTIMCSTCLLSTYQFVTLVPGNWARVMFREISPKVVSYCCYSCWLFSVLNNAYMPMYVSGPQKTHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFIGIMAWTSVSMVIHLNRHHHRMHYLHNPNQINRGHAETKAAHTIMMLVVTFVSLYILDCICSLFHISFVESRLWLIDVIELLHLSFPTVSPFLLICRDPMGPCSLLFIVGLEIHVTVGAITEEQ", "length": 320 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r59", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDFVPRKPPTDLKCKLAYFFHMVAQGTIMCSTCVLSTYQFVTVVPGTWARVMFREISPKVVSYSCFSCWLFSVLHNAYIPMNVSGPQKTHNDSDSKGNSICSISGVNVDMHFLRFSHDIIFLGIMAWTSVSMMIHLNRHHQRMNRIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFHISFVESRLWSRHVIKVLALSFPTISPLLLIFRDPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2C0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r62", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALQILLLCHVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLFAYSYDLTDIVPRKPPTDLKCKLAYFFHLVARGTIMCSTCVLSTYQFVTLVPGTWARVMFSEISPKVVSYCCYSCWLFSVLNNAYMLMNVSGPQKSHNDSDSKSNSICSISGVSVDMNILRFSHDIIFLSIMAWTSVSMVIHLHRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFYISFVESRLWLRYVTKLLALSFPTISPLLLIFRDSKGHCSLHIMSVWKST", "length": 300 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R4R9-1", "protein_name": "Protein phosphatase 1 regulatory subunit 14C", "gene_name": "Ppp1r14c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSVVTGGGEAAGGTSGGGARVFFQSPRGGTGGSRESSSHSGSSREDSAPVATVAAAGQVQQQQRRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMPDVEIDIDDLLDADSEEERASKLQEALVDCYKPTEEFIRELLSRIRGMRKLSPPQKKSV", "length": 164 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8R4V1-1", "protein_name": "NFAT activation molecule 1", "gene_name": "Nfam1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESWLLRRGARVRCLHPPSWLPAWCFLCLLPVPQTLQLTGLVSLTHTSLPIMVSLANTDVFFSCRIEDFTRLQRDLPVKLFHTDIHGRRRWEKQINCQHRPGMENHTRDCMVKLSQANTSATGIYYFIVEGEETYQSDGVVILVRDTVYQPPAFKVQEALMLGFTSLMSVLGVLGTALLLWKKKQISVLGKHTAKTCSGLKSTVGTTKPPAESVYTSLQRRETEVYACMKEETGSPVFSQSPATKEKLNRFEDDNEFNLVYENL", "length": 264 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8T277-1", "protein_name": "5'-AMP-activated protein kinase subunit gamma", "gene_name": "prkag", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWYPGDEDEEFTSIIENIEKKETQEIKIKTEKLRQASLNQLPIEQSEGVGGGELSEYNNNTTNNNTPTNTTTTTNTNTTTMNNSNNNNERILSTSNGFDIRLPPNSIEQPSPSFISSSQDGVLTVDPLAVDGEKGNKESQSPPNGDNQILNNNNMFFKDITSLPSTDNKSSTNTNNNNNENPLKQTISSSPSKSTTTTTTSTSTTTTPSLSSLSSNNNNNSNSNNNYINHSSISTVSEGLENLNLKSGIKKIDSETEKYIEEGKQVFVNFLKGHTCYDVIPISGKVVVLDTKLAVKSAFYALEENGIKSAPLWNSEQHDFTGMITVSDFIDILLYYYKKPKSNNIFQDMGIHRIETFWREISVERPSSLISTEPETNLYDAASLLLCYKIHRLPVVDKKDTNSILHILTHSRILAFMMKSFPQLPEKLLSIPIGSLGIGTFATVVTVMTHTPLVEVLELLSEKKISAVPIIDSETSKIVDVYSKSDVTLMSKQGILSPSDLNLPVHQVLSTFTKLWQRPEQIYTCTRFDKLGDVIERCIKKRVHRLVCIDSSKKVEGILSLSDILNYLLNDVKSINH", "length": 577 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8VEU4-1", "protein_name": "Olfactory receptor", "gene_name": "Or14j2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVENITTMRGFLLMGFSDNHELQILQALLFLVTYLLGSAGNVIIITITTLDPQLQSPMYYFLKHLSILDLSSLSVTVPQYVDICLTQSGYISYAQCMLQIFFFTGFAWGEVAILTVMSYDRYVAVCLPLHYEVIMGPSKCRWAVTAVWLSSVIPGTLYIASIFSIRFCGDRIIHQFFCDVPQVLKFSCSDDYLVTVGVADFLSAVAFACFIGIVNSYVHIFSTVLRMPSAESRSKVFSTCLPHLFVVLLFLSTGIFAYLNPTSDSPTALQFLVSIFYTVLPPTLNPVIYSLRNETIKSVIRKLLLSSKFTG", "length": 312 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VFX0-1", "protein_name": "Olfactory receptor", "gene_name": "Or5b101", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENRTEVRCFILVGLTNDPSLQLPLSITFLLIYIITLIGNLGLILMILLDSRLHTPMYIFLGNLSLVDFCYSSTVTPKVIAGFLTGDKIMSYNACASQMFFFANFGDVENYLLASMAYDRYVAVCKPLHYATTMTTHMCASLVIGCYICGFLSASIYTMDALSLSFCESNVIHHFFCDVLAVMIVSCSDSHVNELILIYVVSFNMFFALIIILISYMFIFTNILKIHSSAGYHKAVSTCASHFTAVSIFYGTIIFMYLQPSSSHTMDTDKIASVFYTMVICMLNPLVYSLRSKDVKSAFTKIVLRSK", "length": 307 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VY69-1", "protein_name": "Vesicle-associated membrane protein 723", "gene_name": "VAMP723", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEMLGSSESQPQAFYIKRTQMKRKKWFQNMKIKLIVLAIIIALILIIILSVCGGFNCGK", "length": 217 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ67-1", "protein_name": "Uncharacterized zinc finger CCHC domain-containing protein At4g19190", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGEGEGSGIRLSKRFAGGKVTGGSLEVDYKTKSGTAWSHSFLNQKPWHPLSYPNQRRKWIAEQTHAQHDRRAEEVAREFAQEQEFFKQAALISKKEREKIETMKAVSFMYVRPPGYDPESAKAAEYKDEKHKGQGSSTQDPVADDNVGSRPEESQGGGERTQERKKPRPKDVFGRALPTEEEFEVLKNAPRMETGIPGRVKPFAVEVRNVKCLRCGNFGHQSGDRDCPLKDAVMPNEELRLKRDDPLTAIIAHTDPSEPLKWELKQKPGLSPPRGGFDPDDPNQQIVAEDIFDEYGGFLEGSIPIEILKSMSSDKKRKSKKNKRHKKHSSRTVEETDESSTGSEDSREKRGSKKRKKLKKKSKKQYDSDSLSFEGSGSDSYRLSRRRHTKHVDPSASLKSEVYHQGNSHREKHYYDEKHQKRKEIVDRPSASSDDSDYYRSNSSRKKRSEDDYKSHHRERKQVHSNDPVSEKSQKQHYSESGKIQRVEKEHRYDERRHRYVDMESENRNRSEKKPRYDDRDSEKHHRSVKGKEKHVYEASDDPEEFSDRYRSTKKTESDSESNRRSRKKKHELSSEEEEGESRKHRYSTNRRRN", "length": 595 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q91V82-1", "protein_name": "Beta-defensin 8", "gene_name": "Defb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRIHYLLFTFLLVLLSPLAAFSQKINEPVSCIRNGGICQYRCIGLRHKIGTCGSPFKCCK", "length": 60 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q923B3-1", "protein_name": "Neurotrophin receptor-interacting factor 1", "gene_name": "Nrif1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASTLPTTWPHESVKFEDVSLTFTEEEWAQLDFQQKCLYREIMMENYSNMISVEHHFSKPNVISQLEKAEDCWPMQREIPQDTLPECSWPSPDPGMNSFPSKSPLMKIEVVEVLTLNKDVAGPRNALIQSLYPEDLNPGNLKPAQQPSKRLTDTEASRQKFRHFQYEESAGPQKAMSQLRKLCHQWLQPNTRSKKQILELLVLEQFLNALPEKFRVWVESQHPEDCKAVVALLENMTSVSKDDASLACSSEATDQLKEKRKGVATLPVTFAAEVPAEEPVTFQDVAVDFNEEEWRLLGPTQKTEYHDVMLETLGNLVSVGWEPTLGNRELTPDSPIPVVKPIHDPNTNDLSRNGTQSTVFESILEDGVKEMHSIESNQVGNLQEKGHPQKKFSESSKSQDQTSRHKSQGSLNEVLPRKYVKVKQKGTGKRKGRTNTISMTRGLRIRKQQKDSVEWQGRSGSTPVTHGSSIKKQQQGSEQGKPGTSRDPITLTVPAKVYQKATGSEESIFMDSSDAMVPDVPPKIHQKGPEWHKVGESNNSMLQGSSVQNHQMESGAGRASDNSLLTHALPVKSHQKGYKEGNVQGNRNSWKHIKPHQKGSKGERVEELSTSEKHVPYVKNHLKTSERGKDREINASIKCDPYIKTYYRGSDVGRLRRANNCRKAFSLHAQQISFIKIHKGSQVCRCSECGKLFRNARYFSVHKKIHTGERPYMCMACGKAFVQSSSLTQHLRIHSGERPFECSECGRTFNDRSAISQHLRTHTGAKPYHCERCGKAFRQSSHLTRHERTHTGERPYVCIKCGKAFTQSSHLIGHQKTHGIKFKKQPKL", "length": 828 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q924S2-1", "protein_name": "Inactive 2'-5' oligoadenylate synthetase 1C", "gene_name": "Oas1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENGLCSIQARELDEFICDYLFPDTTFLTELRADIDSISAFLKERCFQGAAHPVRVSRVVMGGSYDEHTALKGKSEAKMVLFFNNLTSFEEQLKRRGEFVEEIQKHLCQLQQEKPFKVKFEVQSSEEPNSRSLSFKLSSPELQQEVEFDVQPAYDVLYELRNNTYAEPQFYNKVYAQLIHECTTLEKEGDFSICFTDLHQNFMRYRAPKLWNLIRLVKHWYQLCKEKLREPLPPQYALELLTVYVWEHSNKNQEKVTTAKNFRTFLELVAYYKNLRIYWTWYYDFRHQEVCAYLCRQLKKARPLILDPADPTRNVAGSDLQAWDLLAKEAQTWMQSSCFRNCDMSFVPTWDLSPERQECAFQ", "length": 362 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q925U0-1", "protein_name": "Oocyte-secreted protein 1", "gene_name": "Oosp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKPFVGLLGLLLLLSFMKTCADDWTAISLQCADHWFHLRIRPTIFHNIFMEPDEVFLGIGCPVTTTWPNDTYEFIYRTYSCGIANKVLCDVTLLKTQLTYISKNASLQAEMSLSCVMHNQSPHFCEAESRGDFTGDPPGWTEDMRARRDEQTVPMVQPNLSTSSEDHHVSTEPWASETSRSEAAEVPSFMDQNFSVFHFSRM", "length": 202 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q94490-1", "protein_name": "Ubiquitin conjugating enzyme E2 B", "gene_name": "ubcB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MAAHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVFSTWSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKEWTKKYAK", "length": 148 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q945S5-1", "protein_name": "Vacuolar cation/proton exchanger 4", "gene_name": "CAX4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSISTESSSNLSLLENGGGGSDKPTAETSRRVRRTVSASSLIRKRSDLKLISRVRWEFMRRILTNLQEVLLGTKLFILFPAVPLAVVAHRYDCPRAWVFALSLLGLTPLAERISFLTEQIAFHTGPTVGGLMNATCGNATEMIIAILAVGQRKMRIVKLSLLGSILSNLLFVLGTSLFLGGISNLRKHQSFDPRQGDMNSMLLYLALLCQTLPMIMRFTMEAEEYDGSDVVVLSRASSFVMLIAYLAFLIFHLFSSHLSPPPPPLPQREDVHDDDVSDKEEEGAVIGMWSAIFWLIIMTLLVALLSDYLVSTIQDAADSWGLSVGFIGIILLPIVGNAAEHAGAVIFAFRNKLDITLGIALGSATQIALFVVPVTVLVAWTMGIEMDLNFNLLETACFALSILVTSLVLQDGTSNYMKGLVLLLCYVVIAACFFVSNSPSSKLLF", "length": 446 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96AK3-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3D", "gene_name": "APOBEC3D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNPQIRNPMERMYRDTFYDNFENEPILYGRSYTWLCYEVKIKRGRSNLLWDTGVFRGPVLPKRQSNHRQEVYFRFENHAEMCFLSWFCGNRLPANRRFQITWFVSWNPCLPCVVKVTKFLAEHPNVTLTISAARLYYYRDRDWRWVLLRLHKAGARVKIMDYEDFAYCWENFVCNEGQPFMPWYKFDDNYASLHRTLKEILRNPMEAMYPHIFYFHFKNLLKACGRNESWLCFTMEVTKHHSAVFRKRGVFRNQVDPETHCHAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPECAGEVAEFLARHSNVNLTIFTARLCYFWDTDYQEGLCSLSQEGASVKIMGYKDFVSCWKNFVYSDDEPFKPWKGLQTNFRLLKRRLREILQ", "length": 386 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q99N64-1", "protein_name": "Germ cell-less protein-like 2", "gene_name": "Gmcl2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9C7P4-1", "protein_name": "Putative zinc finger CCCH domain-containing protein 9", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MADAGDNQQEAERRSDETESRSIKEPKEKEDEDENPQDQIQSKERMRQSSPYPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQRPQELPVRICKHIMDRNVAEPMYQDWRESESERRFDERTQRTFGDERTQRRYGIEYSGARPEKRSKIVPDFQMRDPRHHDTEWRFERERMERIERQRREAEENLQEQRQRDSIERQRREAEENLQEQRQRDSIERQRREAQENLQQQRQRDSIERQRREAQENLQQQRLQDMPENHNVDDQQNLQEQRRISIEKERTEARLRLEQIRPTVSFPINEFIRAVVLLRELIENWDDKAWKK", "length": 321 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8M4-1", "protein_name": "DNA-directed RNA polymerase subunit 12-like protein", "gene_name": "NRPB12L", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLQQSETDDKQPEQLVIYVCGDCGQENILKRGDVFQCRDCGFRILYKKRILDKKETRIGV", "length": 61 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CQK8-1", "protein_name": "Small proline-rich protein 2A1", "gene_name": "Sprr2a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CWP4-1", "protein_name": "Lymphocyte antigen 6K", "gene_name": "Ly6k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAFLVALLVVLGLQLVQSNALTCHVCEAQNSYACSNPSQCPGEKKFCLLAVTRIFERFFYVSKQCTRRCPTPVVSPPSTNPPSEPKEFLIEKPMPFLFYKCCQWDSCNGEGPPTDQLLKEQPGKASGRRHRYIELLLTGFMVLTANGLSALCLL", "length": 154 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D541-1", "protein_name": "Coiled-coil domain-containing protein 7A", "gene_name": "Ccdc7a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKCAKHPSTISMKLTSVPELPYKKGLLNSSPKPKEKHNAKSKYGKNESMVLRSPPTGESIVRFALPIPLSKTKDKISADEMVRRITTNLKMVVSNLEDTYGACYDNGEKAAEKSEAEGLSIGDDVSSFLLCCSQFTSQLEEAVKEECGALESLYKWFQQQVNQMEEISKDQSNLEELQSDGKTASLNIVQIAKLARKFEDFKSRLKTRKEVMQTKNEDKEIMAETLKHYGLMEKQIEEFITSHSALESQTETESQSGTPSVTTRMARMIKIFENQSTMLEKALNDQQTIESKYKQLETDFQMLIMEKTLLEAEIRRLREIERVKSAAKEEQTKKSGKSEKKKFKEKEKNLSPNREFKSIEELLQIQKEAELLKTEKKTLQGQLKWALEEAERNKTQLEFVLHQKMEMFKEESKTKVGQSQNKSKVKIEDSKDSLPKKSDTQLGGQRKDQISSDQSKRPKKKQLADIDPSAVEDFPPETFKSFTVMPLIEEHRESISSQPKEEMAKASEQSEAEDIEGPLEIPSESSNEDDDLLPEDESPMMEQVTDVGRYKSIYISAEPIDTMSLISRTQSEMETLEAINYDNVLNEGEEQDKKIGKDSDTGRKSKRKRSSKIRKLSTHEEESDIVHYEEATKAKVPSKKRASDPYGDEAYESRGSVSKAQTYTKKQGTHQRGRGSASDAYGDEAYESRGSISKAQTYTRKQGTHQRGRGSVQEEESDTVHYEEVTRAKVPSKKQASDPYGDEAYESQGSVSKAHTHTKKQGTHQRGRGSVHEEESDTMNYEVPRKSKISSRRKGFALPITHQVEMHSSESQGSISKSNTETKKQGTHKRGRDSDADGARTPVSQGSDSKADTERKKHRSKEESTISKDSIPVLDEVQDKTFEHQESGLRLEVQAKKLTFSSQNIHNEESATDIKVEYQNVPSSSQVQLKKQKPLGGEIFTTHFVVPAESHAQLYQTHTPETQIERGTTSGTARLTTIPVEHPKKEASPDNLFPEKKLYITRAPTQTKKQYPPWDAKAETQKKTVKEVQGISEPQTKLNPTMSGIILHLDMDRVVETDLENLEETIVPHVLRSELEIGTDAKNMPETPTSREAVRTEAKGNQDVTISIAKGMKLIGKLKDQHGLSSFASKDTISPGKSLIKSSRDNQDDSLLETKPQENTSDKYHPSKTFPTKVINMLPFSEKSLGSTSANVDVAPKPVYRASRGRSRISKALQQLLKTSEHLKPTSTKNQNADLEKHLYISVRSANKHTQKDKKHGQSNNQKLKKQGALSSTKKQKHKEQPKTETIVENNDKFDDNLMMTTSSPNIKIIKELSKTLNLDGGDIELSDFVFKTASAAKKLENKGPSKTKNLNKESSRDIHILHLTTSAIRTLLLDEEAKIRSLEKKLMKQSTILQKSVSSMKKFMFEEPSRETKMKRKKREKRKIVVKSPHILPITTTQKHTIKEKSEISNLEKPIVRGTDILKKSTSARKKRVLKGKSKSATLPKKCDNFPFDLVRSSSDSSKQEVEEQPKPGNVDKKVSDDSYSPDISTTPTKKHTLKGQSKSRTIYEKGVDLPNNLVLSKSASSIQEFEEQPQPGNVDKKVSDDSYSPDISTSPTKKHTLKGQPKSENSDEKGIKRPNNLHMSASVARKRLLKALSTIP", "length": 1642 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D5R2-1", "protein_name": "WD repeat-containing protein 20", "gene_name": "Wdr20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATEGRGKETNEIKTHFTTREGLYRLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQTGNGNRLCFSVGRELYVYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSDSLFLVAHSSGNMYSYNVEHTYGTTAPHYQLLKQGESFAVHNCKSKSTRDLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSAELHGTMKSYFGGLLCLCWSPDGKYIVTGGEDDLVTVWSFLDCRVIARGRGHKSWVSVVAFDPYTTSVEESDPMEFSDSDKNFQDLLHFGRDRANSTQSRLSKQNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARAHANVMNATGLPAGSNGSAVTTPGNSVPPPLPRSNSLPHSAVSNAASKGSVMDGAITSGVSKFALLSLHDRKERHHEKDRKRNHSMGHISSKSSDKLNLVNKAKTDPAKTLGTSLCPRMEDVPLLEPLICKKIAHERLTVLVFLEDCIVTACQEGFICTWARPGKVSKFQP", "length": 567 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAF8-1", "protein_name": "Uncharacterized protein C4orf51 homolog", "gene_name": "", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTHFLYLTPEILLPFSPLTSTEFELIRRKAQQLWQDETRWSASSMTTYSGSYREKQLDEATCNRLAQRVGQPQFEYKPTPLPGSSAYNTLPGHAGSQEAADGKGRLPDIASPSRDSPLNIKHKVAHQIWGSEVPCPTFLAYRGLRMSPCMQPKKPGFELLMSYRNRGKALLKRLQRQWDYESKLGSSEDSGTDRFSSNTSGSSGRKFK", "length": 208 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPV9-1", "protein_name": "Beta-defensin 5", "gene_name": "Defb5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKIHYLLFAFLLVLLSPLAGVFSKTINNPVSCCMIGGICRYLCKGNILQNGSCGVTSLNCCKRK", "length": 64 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPX4-1", "protein_name": "P2Y purinoceptor 12", "gene_name": "P2ry12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVPGANATSANTTSIPGTSTLCSRDYKITQVLFPLLYTVLFFAGLITNSLAMRIFFQIRSKSNFIIFLKNTVISDLLMILTFPFKILSDAKLGAGHLRTLVCQVTSVTFYFTMYISISFLGLITIDRYLKTTRPFKTSSPSNLLGAKILSVAIWAFMFLLSLPNMILTNRRPKDKDITKCSFLKSEFGLVWHEIVNYICQVIFWINFLIVIVCYSLITKELYRSYVRTRGSAKAPKKRVNIKVFIIIAVFFICFVPFHFARIPYTLSQTRAVFDCNAENTLFYVKESTLWLTSLNACLDPFIYFFLCKSFRNSLMSMLRCSTSGANKKKGQEGGDPSEETPM", "length": 343 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9ER80-1", "protein_name": "Receptor-transporting protein 4", "gene_name": "Rtp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLFPDDFSTWEQTFQELMQEEKPGAKWSLHLDKNIVPDGAALGWRQHQQTVLGRFQCSRCCRSWTSAQVMILCHMYPDTLKSQGQARMRIFGQKCQKCFGCQFETPKFSTEIIKRILNNLVNYILQRYYGHRKIALTSNASLGEKVTLDGPHDTRNCEACSLNSHGRCALAHKVKPPRSPSPLPKSSSPSKSCPPPPQTRNTDFGNKTFQDFGNRTFQGCREPPQREIEPPLFLFLSIAAFALFSLFTR", "length": 249 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9FFP9-1", "protein_name": "Serine/threonine-protein kinase SRK2H", "gene_name": "SRK2H", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDKYEVVKDLGAGNFGVARLLRHKETKELVAMKYIERGRKIDENVAREIINHRSLRHPNIIRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEAEARYFFQQLICGVDYCHSLQICHRDLKLENTLLDGSPAPLLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKHADVWSCGVTLYVMLVGGYPFEDPDDPRNFRKTIQRIMAVQYKIPDYVHISQECRHLLSRIFVTNSAKRITLKEIKKHPWYLKNLPKELTEPAQAAYYKRETPSFSLQSVEDIMKIVGEARNPAPSSNAVKGFDDDEEDVEDEVEEEEEEEEEEEEEEEEEEDEYEKHVKEAHSCQEPPKA", "length": 360 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLZ3-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN12", "gene_name": "KIN12", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGSSEKTTNKLVSILPNYRIGKTLGHGSFAKVKLALHVATGHKVAIKILNRSKIKNMGIEIKVQREIKILRFLMHPHIIRQYEVIETPNDIYVVMEYVKSGELFDYIVEKGKLQEDEARHLFQQIISGVEYCHRNMIVHRDLKPENVLLDSQCNIKIVDFGLSNVMHDGHFLKTSCGSPNYAAPEVISGKPYGPDVDIWSCGVILYALLCGTLPFDDENIPNVFEKIKRGMYTLPNHLSHFARDLIPRMLMVDPTMRISITEIRQHPWFNNHLPLYLSIPPLDTIDQAKKIEEEIIQNVVNIGFDRNHVVDSLANRIQNEATVAYHLILDNRNQNSVPNDPFQSKFKEISDGIFNSTLPVQNITSHVGHSFSALYGLKSNVKDDKTWTLGLQSQGSPYDIMTEIFKALQNLKICWKKIGLYNIKCRWVRSFAYYKNHTIEDECAIILPTVIKFEIQLYKVREGKYLLDILRIDGPQFIFFDLCVAFLRELGVL", "length": 494 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FVV4-1", "protein_name": "DEAD-box ATP-dependent RNA helicase 55", "gene_name": "RH55", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDSSPPNTIIEEAPPRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVARAVRLDFAKCREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQAVADLAKAGLRNPYLKCEADQKSSQLVHLLIENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIVYIRSLAIKDREVLEKGLKAFVSFVRAYKEHQCSYIFSWKGLEIGKLAMGYGILSFPYISEVKQDRIGIVGFTPVQGITFEDIKFKNKSREKQRQQNLLARKDKLQQEKRGKRKKSSKEAVDDSNKASRKRKLTGRQRQTIQTAQDEEEMNLRL", "length": 465 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9JI02-1", "protein_name": "Secretoglobin family 2B member 20", "gene_name": "Scgb2b20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACLPFFEGYASVLSGSRVWLYQELQAFNATAEEKVALEKIQDCFSEERIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JJQ7-1", "protein_name": "X-linked lymphocyte-regulated 4B", "gene_name": "Xlr4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSNDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKRVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JLV9-1", "protein_name": "Prolactin-2C5", "gene_name": "Prl2c5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPSLIQPCSWILLLLLVNSSLLWKNVASLPMCAMRNDRCFMFFEDTFELAGSLSHNISIEVSELFTEFEKHYSNVPGLRDKSPMRCHTSFLPTPENKEQARHIRYEALLKSGDMILDAWENPLDYLVSELSTIKNVPDIIISKATDIKKKINAVQNGVNALMSTMNGDEENKNPAWFLQSDNEDARIRSSYGMISCLDNDFKKVDIYLNILKCYMLKIDNC", "length": 222 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9LJY9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 18", "gene_name": "CYP705A18", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATLISVDFQHCFMYIILLCLFSLLCYSLFFRKPKGTRVGCDLPPSPPSLPIIGHLHHLLSSLTHKSLQKLSSKYGPFLHLRIFSVPIILVSSASVAYEIFKAHDVNVSSRGAAAIDESLLFGSSSFIYAPYGDYWKFMKKIFATKLLRPQVLENSRGVRAEELKRFYRRILDKARKNENIEISKESAMLMNNILCRMSMGRSFSEENGEAERVRGLVGESYALVKKIFFAATLRRLLEKLRIPLFRKEIMGVSDRFDELLERIIVEHKDKLEKEHQVMDMMDVLLAAYRDKNAEYKITRNHIKSFFVDLFVGGTDTSVQTTQWTMAEIINNPNILQTLRKEIDSVVGKSRLIHETDIPNLPYLQAVVKEGLRLHPPGPLLIRTFQERCEMKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLSYSRSGQEDEKEQTLKYLSFGGGRRGCPGVNLGYIFVGTAIGMMVQCFDWKIEGDKVNMEETYGGMNLTMVNPLKCTPVPRTQPFSFTSNLEILSS", "length": 524 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSY1-1", "protein_name": "SKP1-like protein 8", "gene_name": "ASK8", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSTKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKHHVDAANPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE", "length": 152 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTG5-1", "protein_name": "Callose synthase 4", "gene_name": "CALS4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MNQPNRGQILQTVFSHFFPVASPDSELVPSSLHEDITPILRVAKDVEDTNPRSLFLQDLDIKSVDDSINILSGHSHALDKANELDPTSSGRDVRQFKNTILQWLEKNNESTLKARQKSSDAHEMQSFYQQYGDEGINDLLNAGAGSSSSQRTKIYQTAVVLYDVLDAVHRKANIKVAAKILESHAEVEAKNKIYVPYNILPLDPDSKNHAMMRDPKIVAVLKAIRYTSDLTWQIGHKINDDEDVLDWLKTMFRFQKDNVSNQREHLILLLANVQMRQTQRQPNLLDDRALDTVMEKLLGNYNKWCNHVGLESSLRFPKDKQQKVVQQRKLLYTGLYLLIWGEAANLRFMPECLCYIYHHMAFELFEMLESKGSKKKYKPKNPTYSGKDEDFLTKVVTPVYKTIAEEAKKSGEGKHSEWRNYDDLNEYFWSKQYLDKLGWPMKANADFFCKTSQQLGLNKSEKKPDLGDGCVGKVNFVEIRTFWHLFRSFDRMWSFYILSLQAMIIIAWNETSESGGAVFHKVLSVFITAAKLNLFQAFLDIALSWKARHSMSTHVRQRYIFKAVAAAVWVLLMPLTYAYSHTSIFIVAILIYLSPNMLPEMLLLIPSIRRTLEKSDFRPVKLIMWWSQPELYIGRGMHESAWSIYKYMMFWIVLLTSKLAFSYYVEQIKPLMGPTKEIMSVPMPGYWLPEFFPHVKNNRGVVITLWSPVILVYFMDTQIWYAIVSTLVGGLYGAFRHIGEIQTLGMLRSRFQSLPGAFNACLIPNENTKEKGIKLAFSRKCHKIPNTNGKEAKQFSQMWNTIINSFREEDLISNRELELLLMSCWAYPDLDFIRWPIFLLASKIPIAVDIAKKRNGKHRELKNILAEDNCMSCAVRECYASIKKLLNTLVTGNSDLMLITTVFTIIDTHIEKDTLLTELNLSVLPDLHGHFVKLTEYVLQNKDKDKIQIVNVLLKILEMVTKDILKEEIKRLHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMEMPGAPKIQNMLSFSALTPYYSEDVLFSTFDLEKENDGVSILFYLQKIFPDEWKNFLERVKCGTEEELDAIDYLKEEIRLWASYRGQTLTKTVRGMMYYQKALELQAFFDLANERELMKGYKSAEASSSGSSLWAECQALADIKFTYVVACQQYSIHKRSGDQRAKDILTLMTTYPSLRVAYIDEVEQTHIYSKGTSENFYYSALVKAAPQTYSTDSSDSGHMLDQVIYQIKLPGPPIIGEGKPENQNNAIIFTRGEALQTIDMNQDYYIEEAFKMRNLLQEFLEKNGGVRYPTILGLREHIFTRSVSCLAWFMSNQEHSFVTIGQRVLANPLKVRFHYGHPDVFDRVFHLTRGGVSKASKVINLSEDIFAGFNSTLREGTVSHHEYIQVGKGRDVGLNQISMFEAKIANGSGEQTLSRDLYRLGHQFDFFRMLSCYFTTVGFYFCSMLTVLTVYVFLYGRLYLVLSGVEKELGNKPMMMEIILASQSFVQIVFLMAMPMIMEIGLERGFYDALFDFVLMQLQLASVFFTFQLGTKFHYYCKTLLHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKATELGILLLVYHIFGPTYIGLFTISIWFMVGTWLFAPFLFNPSGFEWHEIVEDWADWKKWIEYDNGGIGVPPEKSWESWWEKDIEHLQHSGKWGIVVEIFFALRFFIFQYGLVYQLSAFKNKYSSLWVFGASWLLILILLLTVTVLDYARRRLGTEFQLLFRIIKVSLFLAFMAIFITLMTCRLILPQDVFLCMLALIPTGWGLLLIAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAFSRGLHISRILSGQRKHRSSKNKD", "length": 1871 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LU95-1", "protein_name": "Pyruvate kinase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEMLLGGQATNGALRSKTKIVCTLGPASRSVEMIEKLLKAGMNVARFNFSHGSHSYHQETLDNLRTAMDNTGILCAVMLDTKSPVIRTGFLKEGKPIQLKQGQEITISIDYKIQGDSNTISMSYKKLAEDLKPGDVILCSDGTISLNVLSCDKYLGLVRCRCENSALLGERKNVNLPGIVVDLPTLTEKDKEDIMQWGVPNKIDIIALSFVRKGSDLIQVRKLLGEHSKSIMLMSKVENQEGVMNFDKILENSDAFMVARGDLGMEIPIEKMFLAQKTMINKANAHGKPVVTATQMLESMTVSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAHPETAVLTMSRICKEAEDFIDYDILHKKTLGMVSLPLSPIESLAASAVSTARSVFASAIVVLTRGGYTAELVAKYRPSVPILSVIMPEIAECSDSVAHVARRGLIYRGIIPVVGCSARDSTEEMIRLAIGFAKTKGICKTGDSIVALHKIDGSSIVRIVSVE", "length": 497 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LX08-1", "protein_name": "Annexin D6", "gene_name": "ANN6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASLKIPANIPLPEEDSEQLHKAFKGWGTNEGMIISILAHRNATQRSFIRAVYAANYNKDLLKELDGELSGDFERVVMLWTLDPTERDAYLANESTKLFTKNIWVLVEIACTRPSLEFFKTKQAYHVRYKTSLEEDVAYHTSGNIRKLLVPLVSTFRYDGNADEVNVKLARSEAKTLHKKITEKAYTDEDLIRILTTRSKAQINATLNHFKDKFGSSINKFLKEDSNDDYVQLLKTAIKCLTYPEKYFEKVLRRAINRMGTDEWALTRVVTTRAEVDLERIKEEYLRRNSVPLDRAIANDTSGDYKDMLLALLGHDHA", "length": 318 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXS7-1", "protein_name": "Citrate synthase 1, peroxisomal", "gene_name": "CSY1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEISERARARLAVLNAHLTVSEPNQVLPAIEPWCTSAHITAAPHGSLKGNLKIVDERTGNEYQVPVSEHGTVKTVDLKKITTGKDDKGLNLYDPGYLNTAPVRSSISYIDGDEGILRYRGYPVEELAEKSTYTEVTYLLIYGNLPSQRQLADWEFAISQNSAVPQGVLDMIQSMPNDVHPVGALVTAMSALSIFYPDANPSLMGLGVYKSKQVRDKQIVRVLGQAPTIAAAAYLRKAGKPPVQPLSNLSYSENFLYMVESMGDRSYKPNPRLARVLDILFILQAEHEMNCSTAAARHLSSSGGDVYTAVSGGVGAIYGPLHGGAVEATINMLSEIGTVENIPEFIESVKNKKRRLSGFGHRIYKNYDPRGKVVKKLADEVFSILGRDPLVEVGDALEKAALSDEYFVKRKLYPNVDFYSGLINRAMGIPSSFTAVSRIAGYLSHWRESLDDPDTKIMRPQQVYTGAGIRHYETVRERTKL", "length": 480 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY06-1", "protein_name": "Glycine/proline-rich protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MITCILKISISSFIVLRIFSFLWFSRWFCCGLCGRFWFRCWFCCWFQFWFRCRFYCRFDTGFDVRFAAGFAADLTIGFTIGFDSGFATFLDVGLDDGFATGLDISFAGGFVTGFATDFDVGFDTGFTIGFDTGFDVGLPAVFSIGFDTGFAVGFAISFTVGFDAGFPTGFFVSLDVGFVADFVIGFATGIGVGFEVDFATDFDTCFATGFAVSFDVGFAGGFSIGFAADFANGFTVGFDGGFDASFFVGLDVGFVVGFVTSFAAGLDVGFAIDFATGFDTGFAFGLAFGFDVGFAAGFAVGFATGFTVVFDVGFASDFFVGLDVGFLTGFATDFDIGFVVDFDIGFATGFVVGFDDGSIVGLVVGLPASLDDGLAIDFVVGLDIGFVTGLFVGLVDGLTTDLDVGLVDGLDDGLDDGLDVDLVVVGFVVDGLAVDLDVGLGVGLTVGFVDGLDVGFDDGLDADTVDGLDVGLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDGLDVDLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDDGLVVGLFDVFVGTGLSWEIPPPGKLPPDASPLGIGSFGVGPPGASPFIASPSGEGPLSEGLLGIRSFGISPLSIRPLGISPLGISPPNIEPSKADASDADPSNAGPLGISPLSIDPPVAGASDEGPLGKLPPDLSPPGKGSSGEGPLVESPPSEGPLGVDPLGAGSLGISPLGKSPLRIRPLGISPFGKIPSNIDPSSALASDGGPPDEPASAEGSPDVGIFGISPPIIDPPVEGASDGDPPEKLSLDISPLGKGPSGVSLLGAGPPGVGPVIASPPGEGPRDAGPLGAGSLGISPLNIRRLGISPSGISPPNIDLPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGESESDGDPAGKLPLDISPLSKGPSCVSPLGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLSISPFGISPSSIDSPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGEDASDGDPPGKFPLDISPLGKCPSGVSPLGVGPPGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLGISPFGISPPNIDLPVAGTSIGGPLDEGASDGGPPDVGPFGISPSIIDPPGEGAFDGDPPGKLPLDISPVGKGPSGVSPPGAGPPGDGPVIASPPGESPLDAGPLGAGSLGISPFGISPPNIDWPVAGTSFGGPPGEGASNGGPLVVGPFDMPVVGASDGDALEKLPLDISLPGKGPSDVGPPGAGLPGAAPPGVDLSNVGASDRGASGEGASDGCPPDVGPFDICLLSIDPPVVGASDGGPPDEGASNGGPPDTDSFGGDPLCASPLGIDPPIVDASDGDPFGAGSPDEDPSNENASGEGASGESPPCSDVSCKGPSSAGASIGCSLDNGASTPSSPDTFLSNVFPSDKSSPDAFSPDVAALVTLPSGKDPFDISPPIVALLDVSPLGKTSSDAYSSGISPGIFEKSFPLVKLQTIEYM", "length": 1504 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2S0-1", "protein_name": "Probable mannose-1-phosphate guanylyltransferase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKALILVGGFGTRLRPLTLSLPKPLVDFANKPMILHQIEALKAIGVDEVVLAINYEPEQLLVMSKFSNDVEATLGIKITCSQETEPLGTAGPLALARDKLVDGSGQPFFVLNSDVISDYPLEEMIAFHNAHGGEASIMVTKVDEPSKYGVVVMEEATGRVERFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEIFPQIAEAEKLYAMLLPGFWMDIGQPRDYITGLRLYLDSLRKKSPSKLATGPHILGNVLVDETAEIGEGCLIGPNVAIGPGCVVESGVRLSHCTVMRGVHVKRYACISSSIIGWHSTVGQWARVENMSILGKNVYVCDEIYCNGGVVLHNKEIKSDILKPDIVM", "length": 364 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9NR96-1", "protein_name": "Toll-like receptor 9", "gene_name": "TLR9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGFCRSALHPLSLLVQAIMLAMTLALGTLPAFLPCELQPHGLVNCNWLFLKSVPHFSMAAPRGNVTSLSLSSNRIHHLHDSDFAHLPSLRHLNLKWNCPPVGLSPMHFPCHMTIEPSTFLAVPTLEELNLSYNNIMTVPALPKSLISLSLSHTNILMLDSASLAGLHALRFLFMDGNCYYKNPCRQALEVAPGALLGLGNLTHLSLKYNNLTVVPRNLPSSLEYLLLSYNRIVKLAPEDLANLTALRVLDVGGNCRRCDHAPNPCMECPRHFPQLHPDTFSHLSRLEGLVLKDSSLSWLNASWFRGLGNLRVLDLSENFLYKCITKTKAFQGLTQLRKLNLSFNYQKRVSFAHLSLAPSFGSLVALKELDMHGIFFRSLDETTLRPLARLPMLQTLRLQMNFINQAQLGIFRAFPGLRYVDLSDNRISGASELTATMGEADGGEKVWLQPGDLAPAPVDTPSSEDFRPNCSTLNFTLDLSRNNLVTVQPEMFAQLSHLQCLRLSHNCISQAVNGSQFLPLTGLQVLDLSHNKLDLYHEHSFTELPRLEALDLSYNSQPFGMQGVGHNFSFVAHLRTLRHLSLAHNNIHSQVSQQLCSTSLRALDFSGNALGHMWAEGDLYLHFFQGLSGLIWLDLSQNRLHTLLPQTLRNLPKSLQVLRLRDNYLAFFKWWSLHFLPKLEVLDLAGNQLKALTNGSLPAGTRLRRLDVSCNSISFVAPGFFSKAKELRELNLSANALKTVDHSWFGPLASALQILDVSANPLHCACGAAFMDFLLEVQAAVPGLPSRVKCGSPGQLQGLSIFAQDLRLCLDEALSWDCFALSLLAVALGLGVPMLHHLCGWDLWYCFHLCLAWLPWRGRQSGRDEDALPYDAFVVFDKTQSAVADWVYNELRGQLEECRGRWALRLCLEERDWLPGKTLFENLWASVYGSRKTLFVLAHTDRVSGLLRASFLLAQQRLLEDRKDVVVLVILSPDGRRSRYVRLRQRLCRQSVLLWPHQPSGQRSFWAQLGMALTRDNHHFYNRNFCQGPTAE", "length": 1032 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9QUG3-1", "protein_name": "Prion-like protein doppel", "gene_name": "Prnd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNRLGTWWVAILCMLLASHLSTVKARGIKHRFKWNRKVLPSSGGQITEARVAENRPGAFIKQGRKLDIDFGAEGNRYYAANYWQFPDGIYYEGCSEANVTKEMLVTSCVNATQAANQAEFSREKQDSKLHQRVLWRLIKEICSAKHCDFWLERGAALRVAVDQPAMVCLLGFVWFIVK", "length": 179 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9SAC9-1", "protein_name": "AP-1 complex subunit mu-1", "gene_name": "AP1M1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAGAASALFLLDIKGRVLVWRDYRGDVTAAQAERFFTKLIETEGDSQSNDPVAYDNGVTYMFVQHSNIYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQFTEARILSEFIKTDAYRMEVTQRPPMAVTNSVSWRSEGLKFKKNEVFLDVIESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRILLEAQGRAIKGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAHIERHSRSRVEMLVKARSQFKDRSYATSVEIELPVPTDAYNPDVRTSLGSAAYAPEKDALVWKIQYFYGNKEHTLKADFHLPSIAAEEATPERKAPIRVKFEIPKFIVSGIQVRYLKIIEKSGYQAHPWVRYITMAGEYELRLM", "length": 428 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCN2-1", "protein_name": "Cytochrome P450 71B31", "gene_name": "CYP71B31", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSMFLGLLFLFPLFFILFKNLLPPRKKLPPGPTGLPLIGNLHQLGRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISNYAQTQTLVDLRKSLFSYTASIIFREAFGQNFRECDYINMDKLEELVQETETNVCSLAFTDFFPRGLGWLVDRISGQHSRMNIAFSKLTTFFEDVIDELLKTKQLDDHSDLVTAMLDVINRPRKFGSLKITYDHLIAMMSDVVLAGVNAGTVTMIWTMTELTRHPRVMKKLQEEIRATLGPNKERITEEDLEKVEYLNLVIKESFRLHPPAPLLLPRETMSDIEIQGYHIPKNAHVKINTYAIGRDPKRWTNPEEFNPERFLNTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSLPSGMTIKDIDMEEDGALNIAKKVPLQLVPTLP", "length": 498 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJ39-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 6", "gene_name": "CYP705A6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAAILSVDFQNCFIFIVLCLFSLFCYSLFFKKPKHPRGCDLPPSPPSLPIIGHLHLLFSPLTHKSLQKLSSKYGHLLHLRIFNVPVILVSSASVAYEIFRAHDVNVSSRGVAAIDESLLFGSSGIITAPYGDYWKFMKKLIATKLLRPQSLESSRGIRGEELTRFYNSLLDKARMTESVEISTEAMKLVNNTLCRMSMGRSFSEENGEAEKIRGLVGESYALTKKMFLASLLRKPLKKLRISLFEKEIMGVSDRLDELLERILVEHEEKLHEEHQGTDMMDVLLAASGDENAEYNITRNHIKSFFVEIFIGATDTSVQTTQWTMAEILNHPNVLERLRKDIDSVVGKTRLIHETDLPNLPYLQAVVKEGLRLHPPGPLLVRTFQERCKIKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLRAPPMGGSLDKFIEFS", "length": 442 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMT4-1", "protein_name": "Large ribosomal subunit protein eL13y", "gene_name": "RPL13C", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQTLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKAKLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKIRLEGINKRHAGVRAKRAAEAEKEEKK", "length": 206 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSB4-1", "protein_name": "26S proteasome regulatory subunit 7 homolog B", "gene_name": "RPT1B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIIRDIMEDPENEGPHNMRSDFEPLLSVLRLRDYETGDIIEFDSTEASEEALSDITEFGSTEASEAHFEEPYSARIKKVEKEINELAEKICNLGIKESDTGLAPPNQWDLVSDKQMMQEEQPLLVATCTQIISPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKVVKGYQKFSATPKYMAYYI", "length": 464 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVM4-1", "protein_name": "Serine hydroxymethyltransferase 5", "gene_name": "SHM5", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEPVYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYSEGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDFRPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTTSTHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALAVALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKVEKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLHRAVTITLDIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGFFISESRND", "length": 470 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SWH4-1", "protein_name": "Syntaxin-42", "gene_name": "SYP42", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATRNRTTVYRKHRDACKSARAPLSLSASDSFGGPVIEMVSGSFSRSNHSSYAPLNSYDPGPSSSDAFTIGMPPAWVDDSEEITFNIQKVRDKMNELAKAHSKALMPTFGDNKGIHREVEMLTHEITDLLRKSEKRLQMLSTRGPSEESNLRKNVQRSLATDLQNLSMELRRKQSTYLKRLQQQKEGQDEVDLEFNVNGKMSRLDEEDELGGMGFDEHQTIKLKEGQHVSAEREREIQQVLGSVNDLAQIMKDLSALVIDQGTIVDRIDYNVQNVSTSVEEGYKQLQKAERTQREGAMVKCATILLVLCLIMIVLLILKNILF", "length": 323 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYN6-1", "protein_name": "SOUL heme-binding family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEAALSIFKLSFLLTLLSGGSDLIDSLPPNCNRAECPSYEVVHAGNGYEIHRYNTTVWISTEPIQDISLNEASGNGWNQLSDYMNGNNDYHQRIEIALPYITQVSQNLSTFIVSFFVPKAFQPDPPPGNNLHVQRWDSRYVAVKQISGYVADHKIGKQVAELKASLQGTVWAKAIEKSRETGGVGSAWAYTVAQFSWPFQWSQRVNEIWFPFEMEDEETVSIVTQ", "length": 225 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZB4-1", "protein_name": "Putative DEAD-box ATP-dependent RNA helicase 43", "gene_name": "RH43", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEVDDGYVEYVPVEERLAQMKRKVVEEPGKGMMEHLSDKKKLMSVGELARGITYTEPLSTWWKPPLHVRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAELNGPMEETETIANASGVKGCAYCGGLGHRILQCPKFEHQKSVAISSSRKDHFGSDGYRGEV", "length": 542 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0E0-1", "protein_name": "Putative ATPase, plasma membrane-like", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATGDSLEDIKIEIDDDLEKIPIEEVFKKLRCSREGLSGAEGKERLKIFGPNKLENKKKEHITLRFFALMFKPLSWVIQAAAIMAMLFANGDGRQLFLGIVCLLIVNTIICYLKEDDAANVVAMARAGLSPKTKVLRDGKWSEQEASILVPGDIVSIKPGDIIPCDARLLEGDTLKVDQSALTGEFGPITKGPGEEVFSGTTCKQGEMEAVVIATGVHTFSGTTAHLVDNRTNKVGHFRKVVTEIENLCVISIAIGISIEVIVMYWIQRRNFSDVINNLLVLVIGGIPLAMPTVLYVIMVTGSLRLYRTGTITQRITAIEDMAAIDVLCSDKTGTLTLNKLSVDKNLIKVYSKDVEKEQVLLLAARASRIENRDGIDAAMVGSLADPKEARAGIREVHFNLVDKRTALTYIDGNGDWHRVSKGTPEQILDLCNARDDLRKSVHSAIRNYAERGLKSFAISWFRNTNCNTVFFFPYQLCSEHKYHIVNKLQERHICGLIGDGVDDVPSLKKADVGIAVANATEAARAASDIVLTEPGLSVIIDAVLASRAILQQMKHYTIYAVSITIRVVFGFMFIALIWKFDFSPFMVLAIALLNEETTKAITMDNVTNPSPTPDSLKLKEIFATGVVYGSYMALITVVFFWAAYRTDIFPRTFHVRDLRGNEAEMMCALYLQVSIMSQALFFVIQSRSWFFVERPGELLFLSFVTVQTIATTLAVYASWETARIEGIGWSWAGVIWLYNIIFFFPLDIMKFGIRYILTGKAQSLFDNMVHLVLNSYAKLSNGIYNHTQADHTYSLLEVSTPPSQDLRGVGWV", "length": 813 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0H7-1", "protein_name": "Histone H2A.8", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVCNTNILKDVSTKISAFENVRMIMVEGEMFQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITPRHLQLAIRGDEELDTLIKGTIIGGSVIPHIH", "length": 118 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VXF6-1", "protein_name": "Calnexin 14D", "gene_name": "Cnx14D", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MAWKMLFAILLLLSAAKTGYLAPESENSVEDVQIEPGAIYGDEKFAYKSPVIDAEKFYFADHFDDVEASRKRWVLSQAKKNDIADEIAKYDGIWNWESPQRIFWANDLGLVLKSKAKHAAIAAPFRQPFDFKSNKPLVVQYELTLQEGQDCGGSYLKLLSAGKGTEQLNRFNDKTPYTIMFGPDKCGNNLKMHFIFRHVNPLNGNITEKHCKKPNARLGVPFTDKLPHLYQLVVRPDNSFEIRLDHKIIKEGSLLTDFVPPVNPPAEIDDPNDHKPESWDERKKIPDPNAHKPEDWDEDAPPHLPDTDAVMPNGWLEDEPDMIFDPTAIEPEDWNSEIDGEWEAPLVENPVCKKAPGCGKWKAPLIPNPNYKGKWSAPMIENPNNQGKWAPRKIANPDFFEDLKPFQMTPINAVGLELWSMSSDILFDNLIITDDVELARDFAANSFDIKRLYIDRESFGNKVVELARANRAIWGIVIVAIAVPVAITIFCKFGLGPSRVAAAKKAAAAAAKKTDDPQPDDDLGAEEEEKLEKGKKEEEKKEEEEEEEKEENKEEKKEEEKDDEKEMKDCEEEEDDEEKDDEEKTDERAAGDTNKESTPLSASPKKNQKSYLDNNEDEEDTLKNKEPTPKKRKRKALKE", "length": 639 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W240-1", "protein_name": "K Homology domain-containing protein", "gene_name": "cg3927", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "METPSELTEKQNQDQPTYQPRLNEVAQKFLADLDAERKRLSAEFPLCALLIDESVDRVYSTGRIPGKEPFADVYQQKPMKIIQKVFVPVNKFPKFNFTGKILGPKGNSLRRLQEETHCKIVIKGRNSMRDRNKEEELRSSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLIPDDNDDVWHEQQRELMEMNPKSAKKSNGLNMAPYRSNFDKAIGAIRNRAPKYNNQIRRVTENPREVAYMEEVEYDYDEHLMFCSPVVRL", "length": 270 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W4G6-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG2861", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MDYEIIEFVRRHISHIDISAETRMRYPDPISNNNFDWNSIGLGEQEDAIGQDQQSQALNENANNVSPDVPPSTIAEPTLEPSTIEGNQGQNPRIISSMPDMMPMANSFNPLININQEAGVVINTGINSIDNGLPSTYSEHISQPTNTESTRNMNSSIFDIPSDLDNNSSNESGDEVTQPTAKQSKINANFVCKIESDTNMDKLPTTSNNTNDKPPNNTDSDSDIISISDLIEDLNLDFNQLPITSCDVETHPADTQSNIDANLPYDLISAINMDFVNPANRTYMSAANSTRGTAYKIRKPRTVKRIIKAPSKSNIGKLLREAAKKENAAAGTQRPKKATSTITSSVQNFPNPNNWPACPFPMQNGTMPADEPNDLMPTVSQSLTVPAAQNRPIQTIGKIIKPPVKRTYTKRANKTNNTNIPNKNSTGVIQSNGVAPTIRQGLVEPGGTNILMPWNRQIPMVSVAENPRVQTIDKIIVPPPKRTYKKRVNKTVNTNQSSESAVGDGAPSAPIQSIPKVRKPRGPGKKTAKMVPGQESQQDIPLGVPPNGEAPQTSSQAPVPRVKRAYRKRANNTNNTNILNVNSTGVMESNGGGPTIPNSQQIPNVAVVLNLPIQPIKPKAPRKPRAKKVCNQQPGTDIPFGVSAQGQTAQIKPKPKPRAPRVPKEPKAPKEPKAPKVPKAPRVPKAPRVPKAPRVPKAPRVPKPPKEPKPPKEPKPPKQPKAPRVPKEPKPPKVPKEPKAPRAPRAPRVPKAPKEPKVPKIPKNPRVPKAPRQPKASMNKIQNTVKVPLPIEPVPLETPTYINPINTPVQSTVGEILALGSMPPISPIKFPVLFDEHAAQHTVANSNMPQSSLPTLDIPQLPTRNNKQPSTKSAEDTEILGLGKNKNAMKSDGRIKQGRVSKPSLRFSPSSSSLRPVVRSLSSSSSSSSSWSSCTTCSTCSSCSTCSSSSDSSQSSRSRNRKRRSPKVPIPHKLFESNGEINFQLGQPTRLESPSPPPPVPMQACGTFEEHLTDLTLVRVHAISPLRSPTYDFDFDLPEPMLSEESSSSSSESNDESNVNCQMAPNSQNVSMHFLKVMVFYNCYVLFQQLEKKHQSLFEESSSSSSSESNDETNVNCQMTPNSQNQKKLQSAPIREPSPDQPPEAASRSSNGGTIGPCNLKAFRRDFMISNAENTGFTNPSELNLKKCATKVCTPMERNSGSQLPIQNRFILPNSNKEEGKMNVEPVMPKHKPSRIPIRTKTPIALNLMKEPEDNARKPKNILKPFFSNADVNPCSSTDYEPNFKPCESPLPAKQNDFKLINKDKKSWVSHYQEQESQELKENSFFYAKFNLPNIPKKSFKDSKANAERRCTKTFEDVRKEAQQSRYTKAINKRQNKKAMLESALGNAITEDPTVNCNLADNPNDQVEMPRNPDIVEPTVKPVKFKAFVSASIKPKSSKKRKLMNSASNSKLFKFKIFESEVNKDENEEEDVIPDNLIIPVKRKQNISELLDMQPSTSKAAATITSQPKIAQLKRMPSKLLNEKMKSYAKKRSNDDENKDTKNTGMHMHRYKIPKLSANKPQNTSTTQSPTRGFSRLPGMYQEPNFQNAQHPFSTRGYYPYQRAYPLHRPTSQYHMNQPQPLRLHHSMYVDAEPSFESVFPAPRYQPYNINPSMRHHYSYPGEPSPSTYPMGGIPFQNNNTLYPPMRNDLCYPRGRLNYPVRNLPPMNSQGTYPPNYPQNFLPNYPPSRQFLLSMQRLADINKQIASGSIESVGGFIQMAYAGRKYRTLKDLRERTMLSKDSLRKIFKCMCKIKRPKWRISKFYLYAYWCEISGIPQSSEFGKPLELNAAYRKVISSYAENKFLRMESLMEKTGFGKSKLKRVLKMIGRKRSTKWRLLNYRKPLIHLHRSQDM", "length": 1893 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W6A5-1", "protein_name": "Green-sensitive opsin-1", "gene_name": "opn1mw1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNGTEGSNFYIPMSNRTGLVRSPYDYTQYYLAEPWKFKALAFYMFLLIIFGFPINVLTLVVTAQHKKLRQPLNYILVNLAFAGTIMVIFGFTVSFYCSLVGYMALGPLGCVMEGFFATLGGQVALWSLVVLAIERYIVVCKPMGSFKFSANHAMAGIAFTWFMACSCAVPPLFGWSRYLPEGMQTSCGPDYYTLNPEYNNESYVMYMFSCHFCIPVTTIFFTYGSLVCTVKAAAAQQQESESTQKAEREVTRMVILMVLGFLFAWVPYASFAAWIFFNRGAAFSAQAMAVPAFFSKTSAVFNPIIYVLLNKQFRSCMLNTLFCGKSPLGDDESSSVSTSKTEVSSVSPA", "length": 349 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9XK79-1", "protein_name": "NADH-ubiquinone oxidoreductase chain 4L", "gene_name": "nad4L", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLIDLILIAIYVIGISGLIFNKNNIINILIISELNLGTLGMLFVLASVELNDILGELSGLYILTFTAAESAIGLAIVVILYSKTGIINIRHLNKLKG", "length": 98 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9Y2B0-1", "protein_name": "Protein canopy homolog 2", "gene_name": "CNPY2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKGWGWLALLLGALLGTAWARRSQDLHCGACRALVDELEWEIAQVDPKKTIQMGSFRINPDGSQSVVEVPYARSEAHLTELLEEICDRMKEYGEQIDPSTHRKNYVRVVGRNGESSELDLQGIRIDSDISGTLKFACESIVEEYEDELIEFFSREADNVKDKLCSKRTDLCDHALHISHDEL", "length": 182 }, "evidence": [ { "id": "A0A5G2QG78", "url": "https://omabrowser.org/oma/group/A0A5G2QG78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9Z1X0-1", 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Olfactory receptor OS=Sus scrofa OX=9823 GN=LOC100518591 PE=3 SV=1 CANONICAL=A0A5G2QGD6-1" }, "locus": { "chromosome": "1", "start_pos": 236634721, "end_pos": 236633786, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068649.1", "url": "https://www.ensembl.org/id/ENSSSCT00000068649.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062862.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062862.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGD6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGD6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100518591", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518591", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "G protein-coupled receptor activity", "id": "GO:0004930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004930", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGD6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGD6" } ], "pmid": "" }, { "name": "olfactory receptor activity", "id": 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"database": "Ensembl Peptide", "id": "ENSSSCP00000062913.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062913.1" } ] } }, { "isoform_ac": "A0A5G2QGM9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGM9/entry", "sequence": { "sequence": "MAAADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMTQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEAEWGKSSSTSPVTPPLTSM", "length": 584, "header": "tr|A0A5G2QGM9-1|A0A5G2QGM9_PIG Isoform 1 of Protein phosphatase 2 scaffold subunit Aalpha OS=Sus scrofa OX=9823 GN=PPP2R1A PE=3 SV=1 CANONICAL=A0A5G2QGM9-1" }, "locus": { "chromosome": "6", "start_pos": 57964938, "end_pos": 57921814, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089368.2", "url": "https://www.ensembl.org/id/ENSSSCT00000089368.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063927.2", "url": "https://www.ensembl.org/id/ENSSSCP00000063927.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 578, "start_aa": "Thr", "end_pos": 578, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr578", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], 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"https://www.uniprot.org/uniprotkb/A0A5G2QGK2/entry#names_and_taxonomy" } ] }, { "name": "2.7.1.78", "type": "synonym", "evidence": [ { "id": "A0A5G2QGK2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGK2/entry#names_and_taxonomy" } ] }, { "name": "3.1.3.32", "type": "synonym", "evidence": [ { "id": "A0A5G2QGK2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGK2/entry#names_and_taxonomy" } ] }, { "name": "DNA 5'-kinase/3'-phosphatase", "type": "synonym", "evidence": [ { "id": "A0A5G2QGK2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGK2/entry#names_and_taxonomy" } ] }, { "name": "Polynucleotide kinase-3'-phosphatase", "type": "synonym", "evidence": [ { "id": "A0A5G2QGK2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGK2/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Plays a key role in the repair of DNA damage, functioning as part of both the non-homologous end-joining (NHEJ) and base excision repair (BER) pathways. Through its two catalytic activities, PNK ensures that DNA termini are compatible with extension and ligation by either removing 3'-phosphates from, or by phosphorylating 5'-hydroxyl groups on, the ribose sugar of the DNA backbone.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGK2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGK2#function" }, { "database": "UniProtKB", "id": "ARBA00057280", "url": "https://www.uniprot.org/uniprotkb/ARBA00057280#function" }, { "database": "UniProtKB", "id": "F1RHU1", "url": "https://www.uniprot.org/uniprotkb/F1RHU1#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGK2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGK2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PNKP", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGK2", "locus": { "chromosome": "6", "start_pos": 54867637, "end_pos": 54881088, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000003195", "url": "https://www.ensembl.org/id/ENSSSCG00000003195" } ] } } ], "crossref": [ { "id": "A0A5G2QGK2", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QGK2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000003195", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000003195", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd01625", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01625", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd22736", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22736", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR006549", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006549", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006550", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006550", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006551", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006551", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008984", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008984", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013954", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013954", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023214", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023214", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036412", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036412", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041388", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041388", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR12083", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12083", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12083:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12083:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF08645", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08645", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13671", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13671", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF17913", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17913", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-5649702", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5649702", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "14113", "url": "https://www.rhea-db.org/rhea/14113", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "15669", "url": "https://www.rhea-db.org/rhea/15669", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QGK2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGK2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QGK2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGK2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R7Z7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7Z7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R7Z7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7Z7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R8S0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R8S0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R8S0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R8S0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RGV0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RGV0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RGV0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RGV0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RHU1", "url": "https://www.uniprot.org/uniprotkb/F1RHU1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RHU1-1", "url": "https://www.uniprot.org/uniprotkb/F1RHU1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGGTNAPPTLVGESFPSAEKRRKLQGELRARRLGRDFLGWKWPASRMAKVEARGRLWLESPPGGAPPIFLPSDGQALVLGRGPLTLVTDRKCSRNQVELVADPETRTVAVKQLGVNPSTAGAQELRPGLEGSLGVGDTLYLVNGLHPLTLRWEEARTPELQPDTPPGTPPVPPHEEEEEAEPPKKQMRKSSPGWESFEKLLVFTAPGVKPRGKVASFDLDGTLITTRSGKVFPTGPSDWRILYLEIPRKLRELDAEGYKLVIFTNQMGIGRGKLPAEEFKAKVEAVVEKLGVPFQVLVATHAGLYRKPVIGMWDHLREQGNEGVPISIGDSVFVGLLVCRPPGEAAPPCPAPRFALNLGLPFATPEEFFLKWPVARFELPAFDPRTVSRSGPLCLPESSSLLSPDPEVVVAVGFPGAGKSTFLREHLVSAGYVHVNRDTLGSWQRCVTTCEAALKQRKRVVIDNTNPDLQSRARYIKCARDAGVPCRCFLFSASLEQARHNNRFREMTDPSHVPVSDIVIYGYRKQFEAPTLAEGFAAVLEIPFRLHVAPQLERLYRQFSEG", "length": 562, "header": "tr|A0A5G2QGK2-1|A0A5G2QGK2_PIG Isoform 1 of Bifunctional polynucleotide phosphatase/kinase OS=Sus scrofa OX=9823 GN=PNKP PE=1 SV=1 CANONICAL=A0A5G2QGK2-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QGK2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGK2/entry", "sequence": { "sequence": "MGGTNAPPTLVGESFPSAEKRRKLQGELRARRLGRDFLGWKWPASRMAKVEARGRLWLESPPGGAPPIFLPSDGQALVLGRGPLTLVTDRKCSRNQVELVADPETRTVAVKQLGVNPSTAGAQELRPGLEGSLGVGDTLYLVNGLHPLTLRWEEARTPELQPDTPPGTPPVPPHEEEEEAEPPKKQMRKSSPGWESFEKLLVFTAPGVKPRGKVASFDLDGTLITTRSGKVFPTGPSDWRILYLEIPRKLRELDAEGYKLVIFTNQMGIGRGKLPAEEFKAKVEAVVEKLGVPFQVLVATHAGLYRKPVIGMWDHLREQGNEGVPISIGDSVFVGLLVCRPPGEAAPPCPAPRFALNLGLPFATPEEFFLKWPVARFELPAFDPRTVSRSGPLCLPESSSLLSPDPEVVVAVGFPGAGKSTFLREHLVSAGYVHVNRDTLGSWQRCVTTCEAALKQRKRVVIDNTNPDLQSRARYIKCARDAGVPCRCFLFSASLEQARHNNRFREMTDPSHVPVSDIVIYGYRKQFEAPTLAEGFAAVLEIPFRLHVAPQLERLYRQFSEG", "length": 562, "header": "tr|A0A5G2QGK2-1|A0A5G2QGK2_PIG Isoform 1 of Bifunctional polynucleotide phosphatase/kinase OS=Sus scrofa OX=9823 GN=PNKP PE=1 SV=1 CANONICAL=A0A5G2QGK2-1" }, "locus": { "chromosome": "6", "start_pos": 54880807, "end_pos": 54874375, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080633.2", "url": "https://www.ensembl.org/id/ENSSSCT00000080633.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061126.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061126.1" } ] } }, { "isoform_ac": "A0A5G2R7Z7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7Z7/entry", "sequence": { "sequence": "MAKVEARGRLWLESPPGGAPPIFLPSDGQALVLGRGPLTLVTDRKCSRNQVELVADPETRTVAVKQLGVNPSTAGAQELRPGLEGSLGVGDTLYLVNGLHPLTLRWEEARTPELQPDTPPGTPPVPPHEEEEEAEPPKKQMRKSSPGWESFEKLLVFTAPGVKPRGKVASFDLDGTLITTRSGKVFPTGPSDWRILYLEIPRKLRELDAEGYKVLVATHAGLYRKPVIGMWDHLREQGNEGVPISIGDSVFVGDAAGRPANWAPGRKKKDFSCADRLFALNLGLPFATPEEFFLKWPVARFELPAFDPRTVSRSGPLCLPESSSLLSPDPEVVVAVGFPGAGKSTFLREHLVSAGYVHVNRDTLGSWQRCVTTCEAALKQRKRVVIDNTNPDLQSRARYIKCARDAGVPCRCFLFSASLEQARHNNRFREMTDPSHVPVSDIVIYGYRQQFEAPTLAEGFAAVLEIPFRLHVAPQLERLYRQFSEG", "length": 486, "header": "tr|A0A5G2R7Z7-1|A0A5G2QGK2_PIG Computationally mapped isoform of Bifunctional polynucleotide phosphatase/kinase OS=Sus scrofa OX=9823 GN=PNKP PE=1 SV=2 CANONICAL=A0A5G2QGK2-1" }, "locus": { "chromosome": "6", "start_pos": 54880389, "end_pos": 54874375, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071340.2", "url": "https://www.ensembl.org/id/ENSSSCT00000071340.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073393.2", "url": "https://www.ensembl.org/id/ENSSSCP00000073393.2" } ] } }, { "isoform_ac": "A0A5G2R8S0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R8S0/entry", "sequence": { "sequence": "MGVVAPSCGLKQATLPSREGNNHRKIQIPTPPPQSSVELVADPETRTVAVKQLGVNPSTAGAQELRPGLEGSLGVGDTLYLVNGLHPLTLRWEEARTPELQPDTPPGTPPVPPHEEEEEAEPPKKQMRKSSPGWESFEKLLVFTAPGVKPRGKVASFDLDGTLITTRSGKVFPTGPSDWRILYLEIPRKLRELDAEGYKLVIFTNQMGIGRGKLPAEEFKAKVEAVVEKLGVPFQVLVATHAGLYRKPVIGMWDHLREQGNEGVPISIGDSVFVGDAAGRPANWAPGRKKKDFSCADRLFALNLGLPFATPEEFFLKWPVARFELPAFDPRTVSRSGPLCLPESSSLLSPDPEVVVAVGFPGAGKSTFLREHLVSAGYVHVNRDTLGSWQRCVTTCEAALKQRKRVVIDNTNPDLQSRARYRVSGAGGRGGGGGSAEWAGAPHQPAPNRYIKCARDAGVPCRCFLFSASLEQARHNNRFREMTDPSHVPVSDIVIYGYRQQFEAPTLAEGFAAVLEIPFRLHVAPQLERLYRQFSEG", "length": 537, "header": "tr|A0A5G2R8S0-1|A0A5G2QGK2_PIG Computationally mapped isoform of Bifunctional polynucleotide phosphatase/kinase OS=Sus scrofa OX=9823 GN=PNKP PE=1 SV=2 CANONICAL=A0A5G2QGK2-1" }, "locus": { "chromosome": "6", "start_pos": 54879741, "end_pos": 54874375, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069481.2", "url": "https://www.ensembl.org/id/ENSSSCT00000069481.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070518.2", "url": "https://www.ensembl.org/id/ENSSSCP00000070518.2" } ] } }, { "isoform_ac": "A0A5G2RGV0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RGV0/entry", "sequence": { "sequence": "MAKVEARGRLWLESPPGGAPPIFLPSDGQALVLGRGPLTLVTDRKCSRNQVELVADPETRTVAVKQLGVNPSTAGAQELRPGLEGSLGVGDTLYLVNGLHPLTLRWEEARTPELQPDTPPGTPPVPPHEEEEEAEPPKKQMRKSSPGWESFEKLLVFTAPGVKPRGKVASFDLDGTLITTRSGKVFPTGPSDWRILYLEIPRKLRELDAEGYKLVIFTNQMGIGRGKLPAEEFKAKVEAVVEKLGVPFQVLVATHAGLYRKPVIGMWDHLREQGNEGVPISIGDSVFVGDAAGRPANWAPGRKKKDFSCADRLFALNLGLPFATPEEFFLKWPVARFELPAFDPRTVSRSGPLCLPESSSLLSPDPEVVVAVGFPGAGKSTFLREHLVSAGYVHVNRVHQVCPRRRRPLPLLPLQRQPGAGASQQPVPGDDGPLPRPRVRHRHLRLQEAVRSTHAGRRLRGRPGDPVPAARGAAA", "length": 475, "header": "tr|A0A5G2RGV0-1|A0A5G2QGK2_PIG Computationally mapped isoform of Bifunctional polynucleotide phosphatase/kinase OS=Sus scrofa OX=9823 GN=PNKP PE=1 SV=1 CANONICAL=A0A5G2QGK2-1" }, "locus": { "chromosome": "6", "start_pos": 54880389, "end_pos": 54874406, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087533.2", "url": "https://www.ensembl.org/id/ENSSSCT00000087533.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070485.2", "url": "https://www.ensembl.org/id/ENSSSCP00000070485.2" } ] } }, { "isoform_ac": "F1RHU1-1", "url": "https://www.uniprot.org/uniprotkb/F1RHU1/entry", "sequence": { "sequence": "MAKVEARGRLWLESPPGGAPPIFLPSDGQALVLGRGPLTLVTDRKCSRNQVELVADPETRTVAVKQLGVNPSTAGAQELRPGLEGSLGVGDTLYLVNGLHPLTLRWEEARTPELQPDTPPGTPPVPPHEEEEEAEPPKKQMRKSSPGWESFEKLLVFTAPGVKPRGKVASFDLDGTLITTRSGKVFPTGPSDWRILYLEIPRKLRELDAEGYKLVIFTNQMGIGRGKLPAEEFKAKVEAVVEKLGVPFQVLVATHAGLYRKPVIGMWDHLREQGNEGVPISIGDSVFVGDAAGRPANWAPGRKKKDFSCADRLRTVSRSGPLCLPESSSLLSPDPEVVVAVGFPGAGKSTFLREHLVSAGYVHVNRDTLGSWQRCVTTCEAALKQRKRVVIDNTNPDLQSRARYIKCARDAGVPCRCFLFSASLEQARHNNRFREMTDPSHVPVSDIVIYGYRKQFEAPTLAEGFAAVLEIPFRLHVAPQLERLYRQFSEG", "length": 491, "header": "tr|F1RHU1-1|A0A5G2QGK2_PIG Computationally mapped isoform of Bifunctional polynucleotide phosphatase/kinase OS=Sus scrofa OX=9823 GN=PNKP PE=1 SV=3 CANONICAL=A0A5G2QGK2-1" }, "locus": { "chromosome": "6", "start_pos": 54880389, "end_pos": 54874375, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000003550.5", "url": "https://www.ensembl.org/id/ENSSSCT00000003550.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000003467.4", "url": "https://www.ensembl.org/id/ENSSSCP00000003467.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R7Z7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7Z7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-5649702", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5649702", "resource": "Reactome", "description": "APEX1-Independent Resolution of AP Sites via the Single Nucleotide Replacement Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity", "id": "GO:0046404", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046404", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGK2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGK2" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGK2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGK2" } ], "pmid": "" }, { "name": "polynucleotide 3'-phosphatase activity", "id": "GO:0046403", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046403", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGK2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGK2" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGK2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGK2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "positive regulation of double-strand break repair via nonhomologous end joining", "id": "GO:2001034", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2001034", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGK2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGK2" } ], "pmid": "" }, { "name": "DNA repair", "id": 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The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
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The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5649723", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5649723" } ] }, { "id": "R-SSC-5649726", "name": "LIG3:XRCC1 and PNKP bind NEIL1,NEIL2:POLB:SSB(3'Pi)-gap-dsDNA", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5649726", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5649726" } ] }, { "id": "R-SSC-5649734", "name": "LIG3 ligates NEIL1,NEIL2-generated single strand break", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QGP2-1", "uniprot_ac": "A0A5G2QGP2", "uniprot_id": "A0A5G2QGP2_PIG", "mass": { "chemical_mass": 65016.0, "monoisotopic_mass": 65016.0 }, "refseq": {}, "gene_names": [ { "name": "SPATA7", "type": "recommended", "evidence": [ { "id": "A0A5G2QGP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGP2" } ] } ], "protein_names": [ { "name": "Spermatosis associated 7", "type": "synonym", "evidence": [ { "id": "A0A5G2QGP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGP2/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGP2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGP2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SPATA7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGP2", "locus": { "chromosome": "7", "start_pos": 110364033, "end_pos": 110309462, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000002424", "url": "https://www.ensembl.org/id/ENSSSCG00000002424" } ] } } ], "crossref": [ { "id": "A0A5G2QGP2", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QGP2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000002424", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000002424", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR029357", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029357", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "FITEHEW", "url": "https://omabrowser.org/oma/group/FITEHEW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR14917", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14917", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14917:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14917:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15244", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15244", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QGP2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGP2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QGP2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGP2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SDZ0", "url": "https://www.uniprot.org/uniprotkb/F1SDZ0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SDZ0-1", "url": "https://www.uniprot.org/uniprotkb/F1SDZ0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "NAGSKLLLATSVLPRYGPPCLFKGHLSTKSNAFCTDSSSLRLSTLHLVKNHMAVHYNKILSAKAAVDCSVPLSMSASIKYADQQRREKLKKELARCERELKFTKTAGQANSKSNSKSLFTTLQKPSGEPQDEDDVLIEEVNGFPSFTRSPVTSSERLHPGLPKSEKVLTNGTENNSSSPLSSMDYAASGPRKSYSGTSCSRRPRGAFPNSHRFQLVISKAPSGDLLDKHSELFSNRHLPFTPRTLKSEAKSFLSQYRYYTPAKRKKDFTNQRIEAETQTDLSSFKSDFETNEIKNFTDSEMNIKQGRELPWDETKDGALQCSSARAVCQYSLHPPSERKIYSDEEELLYLSFIEDVTDEILKLGLFSNRFLERLFERHIKQNKHHLEEEKMRHLLHILKVDLGCISKENSVKLDDVSMLHLPDFEKAEDSDQNEYKNEQDLAIRQERQQYRKALDMLLSVPKDENEVVSSPNEFFLPIYKSKYSEGVIIQQVNDETNLGTSIWDEKNAGMLDSVLDQETSVNVIEGDSDTEKVETSNELCCLSTALSPSVQLCSISGDNQNTEGPTLKIMEMSIED", "length": 576, "header": "tr|A0A5G2QGP2-1|A0A5G2QGP2_PIG Isoform 1 of Spermatosis associated 7 OS=Sus scrofa OX=9823 GN=SPATA7 PE=4 SV=1 CANONICAL=A0A5G2QGP2-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QGP2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGP2/entry", "sequence": { "sequence": "NAGSKLLLATSVLPRYGPPCLFKGHLSTKSNAFCTDSSSLRLSTLHLVKNHMAVHYNKILSAKAAVDCSVPLSMSASIKYADQQRREKLKKELARCERELKFTKTAGQANSKSNSKSLFTTLQKPSGEPQDEDDVLIEEVNGFPSFTRSPVTSSERLHPGLPKSEKVLTNGTENNSSSPLSSMDYAASGPRKSYSGTSCSRRPRGAFPNSHRFQLVISKAPSGDLLDKHSELFSNRHLPFTPRTLKSEAKSFLSQYRYYTPAKRKKDFTNQRIEAETQTDLSSFKSDFETNEIKNFTDSEMNIKQGRELPWDETKDGALQCSSARAVCQYSLHPPSERKIYSDEEELLYLSFIEDVTDEILKLGLFSNRFLERLFERHIKQNKHHLEEEKMRHLLHILKVDLGCISKENSVKLDDVSMLHLPDFEKAEDSDQNEYKNEQDLAIRQERQQYRKALDMLLSVPKDENEVVSSPNEFFLPIYKSKYSEGVIIQQVNDETNLGTSIWDEKNAGMLDSVLDQETSVNVIEGDSDTEKVETSNELCCLSTALSPSVQLCSISGDNQNTEGPTLKIMEMSIED", "length": 576, "header": "tr|A0A5G2QGP2-1|A0A5G2QGP2_PIG Isoform 1 of Spermatosis associated 7 OS=Sus scrofa OX=9823 GN=SPATA7 PE=4 SV=1 CANONICAL=A0A5G2QGP2-1" }, "locus": { "chromosome": "7", "start_pos": 110363886, "end_pos": 110313147, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090635.1", "url": "https://www.ensembl.org/id/ENSSSCT00000090635.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063474.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063474.1" } ] } }, { "isoform_ac": "F1SDZ0-1", "url": "https://www.uniprot.org/uniprotkb/F1SDZ0/entry", "sequence": { "sequence": "MDGSRRVRATSVLPRYGPPCLFKGHLSTKSNAFCTDSSSLRLSTLHLVKNHMAVHYNKILSAKAAVDCSVPLSMSASIKYADQQRREKLKKELARCERELKFTKTAGQANSKSNSKSLFTTLQKPSGEPQDEDDVLIEEVNGFPSFTRSPVTSSERLHPGLPKSEKVLTNGTENNSSSPLSSMDYAASGPRKSYSGTSCSRRPRGAFPNSHRFQLVISKAPSGDLLDKHSELFSNRHLPFTPRTLKSEAKSFLSQYRYYTPAKRKKDFTNQRIEAETQTDLSSFKSDFETNEIKNFTDSEMNIKQGRELPWDETKDGALQCSSARAVCQYSLHPPSERKIYSDEEELLYLSFIEDVTDEILKLGLFSNRFLERLFERHIKQNKHHLEEEKMRHLLHILKVDLGCISKENSVKLDDVSMLHLPDFEKAEDSDQNEYKNEQDLAIRQERQQYRKALDMLLSVPKDENEVVSSPNEFFLPIYKSKYSEGVIIQQVNDETNLGTSIWDEKNAGMLDSVLDQETSVNVIEGDSDTEKVETSNELCCLSTALSPSVQLCSISGDNQNTEGPTLKIMEMSIED", "length": 576, "header": "tr|F1SDZ0-1|F1SDZ0_PIG Computationally mapped isoform of Spermatosis associated 7 OS=Sus scrofa OX=9823 GN=SPATA7 PE=4 SV=2 CANONICAL=A0A5G2QGP2-1" }, "locus": { "chromosome": "7", "start_pos": 110363886, "end_pos": 110309593, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002693.3", "url": "https://www.ensembl.org/id/ENSSSCT00000002693.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002624.2", "url": "https://www.ensembl.org/id/ENSSSCP00000002624.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 260, "start_aa": "Thr", "end_pos": 260, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr260", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGP2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGP2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Z5E2-1", "protein_name": "Spermatosis associated 7", "gene_name": "SPATA7", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MATAEAAGPGHVAPSQTQRPAPPGRCGDRAAAALNRELGSPESMGVTMESDGRRSQVNEYPAVVIPRCGPASPFKGQLSTKSNAFCIDSSRSLTKQYLIRDHLMFHYNRILSAKAAVDCSVPRSSLSSIKLADQQRRENLKKKIARYEKEMSVGKSASRSSSRESGRLLSTSFGKSPLEVEDKDNLFSCAEHTPYLSRALSPYGELGLLHSSPVKRARKHSRNRSNASYSNSSVSMSSTPRKRSGVSSRCSSDSFVSISHSQRRQERSSTTYSGDLLDRHAELFTNSQKPFTPRTLISDAKSALLGYRYYTAAQRQRKKHCKQNVEVETQTDVISVPNTDKASERKVMTEQRKMTVKTEDKIYNMDEPERGIAAFPYSFLREASLYAEQPSARMNIEAVEEDDHLYLTFIEDVTNEILNIGLFSNRVLEQLFECHIEEYKNRLDESKMRHLLDVLKADLGCSPGSGAEQIRAGWEAFELLDLGKFNMMEQLEFSSRSRRQGKATRSEEFFKTLDLLLKEPSTCEVPLCSENSKKTESKGDFSEDIDEMMNAETESHVCVKSEDPDASPSCEETLNLITCDSDLEANKELDDLEENFAEVLQIAHDHSL", "length": 608 }, "evidence": [ { "id": "A0A5G2QGP2", "url": "https://omabrowser.org/oma/group/A0A5G2QGP2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q80VP2-1", "protein_name": "Spermatogenesis-associated protein 7 homolog", "gene_name": "Spata7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDGSRRVRATSVLPRYSPPCLFTGHLSTKSNAFCTDSSSLRLSTLQLVKNHMAIHYNKILSAKAAVDCSIPVSVNTSIKYADQQRREKLRKELARCEKEFKLSKSAMQTNSKMNSKFFVNSLQKPSGEPQDQDVFIEEMTRYPSFSKSLIPSSEGLHLSLPESSKMLMSGTQKHASTSPSRHSGCGHGCDRRPRSAHQFQVALAKTPSGDLLEKHSDLFSNKQSPFTPRTLKTEAKSFLSQYRYYTPAKRRKDFSDQRMEAETQTELSSFNSELGTAEKTSSKDSEVNINQVPNYTRNGAEDKIAPLPSQGQNLAWDSIQDGILQQSSERASCKLSTEFSPDSKIYSDEEELLYLSFMENVTDEILKLGLFSNRFLERLFERHIKKNKHHLEEGKMRYLLHGLKVDLGCISEEDPAKQKHFRMLNQLHFQKALISRENEFVSDEETVSHHERQQYQEALDMLSAVPKDENKMFSLPGEFLIPAHKVKHSEGVIIQQVNDETDNEASPWNENNPSVSDSVIDQETSVDVIEGDSDFERAETSRELCCLSTSLSPSGPFPSINGGSNHGKELSTLRIMGMSIED", "length": 582 }, "evidence": [ { "id": "A0A5G2QGP2", "url": "https://omabrowser.org/oma/group/A0A5G2QGP2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9P0W8-1", "protein_name": "Spermatogenesis-associated protein 7", "gene_name": "SPATA7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDGSRRVRATSVLPRYGPPCLFKGHLSTKSNAFCTDSSSLRLSTLQLVKNHMAVHYNKILSAKAAVDCSVPVSVSTSIKYADQQRREKLKKELAQCEKEFKLTKTAMRANYKNNSKSLFNTLQKPSGEPQIEDDMLKEEMNGFSSFARSLVPSSERLHLSLHKSSKVITNGPEKNSSSSPSSVDYAASGPRKLSSGALYGRRPRSTFPNSHRFQLVISKAPSGDLLDKHSELFSNKQLPFTPRTLKTEAKSFLSQYRYYTPAKRKKDFTDQRIEAETQTELSFKSELGTAETKNMTDSEMNIKQASNCVTYDAKEKIAPLPLEGHDSTWDEIKDDALQHSSPRAMCQYSLKPPSTRKIYSDEEELLYLSFIEDVTDEILKLGLFSNRFLERLFERHIKQNKHLEEEKMRHLLHVLKVDLGCTSEENSVKQNDVDMLNVFDFEKAGNSEPNELKNESEVTIQQERQQYQKALDMLLSAPKDENEIFPSPTEFFMPIYKSKHSEGVIIQQVNDETNLETSTLDENHPSISDSLTDRETSVNVIEGDSDPEKVEISNGLCGLNTSPSQSVQFSSVKGDNNHDMELSTLKIMEMSIEDCPLDV", "length": 599 }, "evidence": [ { "id": "A0A5G2QGP2", "url": "https://omabrowser.org/oma/group/A0A5G2QGP2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9R0A3-1", "protein_name": "Spermatogenesis-associated protein 7 homolog", "gene_name": "Spata7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAVHYNKILSAKAAVDCSIPVSVNASIKYADQQRREKLRKELARCEKEFKLSKSAMQTNSKMNSKFFVNSLQRPSGEPQDQDVLIEERLTRYPSFSKSLIPSPEGLHLSLPESNKILMNGTQKYPSTAPPRYSGCGHGYDRRPRSAHQFQVVISKTPSGDLLEKHADLFSNNQSPFTPRTLKTEAKSFLSQYRYYTPAKRRRDFSDQRMEAETQTELSSFNSELGTAEKKSSKDSDVSIKQAPNYMRNGAEDKIAPLSLQGQNLAWDKSKDGILQPSSERAPCTQFSPDSKIYSDEEELLYLSFMENVTDEILKLGLFSNRFLERLFERHIRKNKHHLEEGKMRYLLHGLKVDLGCISEEEQNSFRIFNEFHFQKALTSRENRFINDTEAVNHHERQQYQEALNMLSSVPKDENKMFSFPGEFLLPAHKVKHSEGVIVQQVNDETDFEALPWDGNNPSVSDSFIDQETSVDVIEGDSDFEMVETSRELCCLSTSLSPSVPLPSIEGGSNHDKELSTLKIMEMSIED", "length": 526 }, "evidence": [ { "id": "A0A5G2QGP2", "url": "https://omabrowser.org/oma/group/A0A5G2QGP2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "photoreceptor cell maintenance", "id": "GO:0045494", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045494", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGP2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGP2" } ], "pmid": "" }, { "name": "microtubule cytoskeleton organization", "id": "GO:0000226", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000226", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGP2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGP2" } ], "pmid": "" }, { "name": "protein localization to photoreceptor connecting cilium", "id": "GO:1903621", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1903621", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGP2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGP2" } ], "pmid": "" }, { "name": "protein localization to photoreceptor outer segment", "id": "GO:1903546", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1903546", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGP2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGP2" } ], "pmid": "" } ] 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"sequence": { "sequence": "MAEEQTLFQGPESKPPGPVPRQGTLAEKPDSESETWHVRFRTFISSKESNPIQDLRRLRELCHLWLRPDLHTKEQIMDRLVLEQFMICMPLECQVLVKESGVESCQELEDMLINQQKPKNCVSRTLVTVWGQDFLVRGSDVDTVEAEARDMDDERALCKEPLSSVSEIHAENGQQESQELQNFPDVQEPARGQIVHSADSQLGGWMGSSQPTSVFDPRETGVTENVPWPMGCAGSLLSAAAGWTEGGKNPEEGASVTHGDADLPCTSSVPETEEPTAGGNRGESVRRLTRSKRRRASSLTSQEGLQEGAPSLDTGRCSGQPQTSSACSAGRVKTTSHAKGKEAPGGTDYQCRECNKRFHYRSQFTLHKRTHTGERPFQCSLCAKAFMQPSDLRVHQRIHTGEKPYRCDTCSRDFTHDSTLRAHKRTHTKERPFPCEQCDMAFSHRGNLNVHRRTHSGLKPYVCPECHGAFRQLGTFKRHQKTHLKPAVTAPIRP", "length": 494, "header": "tr|A0A5G2QGV0-1|A0A5G2QGV0_PIG Isoform 1 of Zinc finger and SCAN domain-containing protein 5B OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A5G2QGV0-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QGV0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGV0/entry", "sequence": { "sequence": "MAEEQTLFQGPESKPPGPVPRQGTLAEKPDSESETWHVRFRTFISSKESNPIQDLRRLRELCHLWLRPDLHTKEQIMDRLVLEQFMICMPLECQVLVKESGVESCQELEDMLINQQKPKNCVSRTLVTVWGQDFLVRGSDVDTVEAEARDMDDERALCKEPLSSVSEIHAENGQQESQELQNFPDVQEPARGQIVHSADSQLGGWMGSSQPTSVFDPRETGVTENVPWPMGCAGSLLSAAAGWTEGGKNPEEGASVTHGDADLPCTSSVPETEEPTAGGNRGESVRRLTRSKRRRASSLTSQEGLQEGAPSLDTGRCSGQPQTSSACSAGRVKTTSHAKGKEAPGGTDYQCRECNKRFHYRSQFTLHKRTHTGERPFQCSLCAKAFMQPSDLRVHQRIHTGEKPYRCDTCSRDFTHDSTLRAHKRTHTKERPFPCEQCDMAFSHRGNLNVHRRTHSGLKPYVCPECHGAFRQLGTFKRHQKTHLKPAVTAPIRP", "length": 494, "header": "tr|A0A5G2QGV0-1|A0A5G2QGV0_PIG Isoform 1 of Zinc finger and SCAN domain-containing protein 5B OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A5G2QGV0-1" }, "locus": { "chromosome": "6", "start_pos": 60507613, "end_pos": 60504178, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066568.1", "url": "https://www.ensembl.org/id/ENSSSCT00000066568.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064002.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064002.1" } ] } }, { "isoform_ac": "A0A5G2QIB8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIB8/entry", "sequence": { "sequence": "MAEEQTLFQGPESKPPGPVPRQGTLAEKPDSESETWHVRFRTFISSKESNPIQDLRRLRELCHLWLRPDLHTKEQIMDRLVLEQFMICMPLECQVLVKESGVESCQELEDMLINQQKPKNCTIVHVGGQDFLVRGSDVDTVEAEARDMDDERALCKEPLSSVSEIHAENGQQESQELQNFPDVQEPARGQIVHSADSQLGGWMGSSQPTSVFDPRETGVTENVPWPMGCAGSLLSAAAGWTEGGKNPEEGASVTHGDADLPCTSSVPETEEPTAGGNRGESVRRLTRSKRRRASSLTSQEGLQEGAPSLDTGRCSGQPQTSSACSAGRVKTTSHAKGKEAPGGTDYQCRECNKRFHYRSQFTLHKRTHTGERPFQCSLCAKAFMQPSDLRVHQRIHTGEKPYRCDTCSRDFTHDSTLRAHKRTHTKERPFPCEQCDMAFSHRGNLNVHRRTHSGLKPYVCPECHGAFRQLGTFKRHQKTHLKRPLGVPIAAQ", "length": 492, "header": "tr|A0A5G2QIB8-1|A0A5G2QIB8_PIG Computationally mapped isoform of Zinc finger and SCAN domain-containing protein 5B OS=Sus scrofa OX=9823 GN= PE=3 SV=2 CANONICAL=A0A5G2QGV0-1" }, "locus": { "chromosome": "6", "start_pos": 60507446, "end_pos": 60504178, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078290.2", "url": "https://www.ensembl.org/id/ENSSSCT00000078290.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063636.2", "url": "https://www.ensembl.org/id/ENSSSCP00000063636.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 276, "start_aa": "Thr", "end_pos": 276, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr276", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGV0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGV0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGV0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGV0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGV0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGV0" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGV0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGV0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGV0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGV0" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGV0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGV0" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGV0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGV0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QGV0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 494, "overlap": "1.0", "method": 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The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
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The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. 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"synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 5, "end_pos": 7 }, { "start_pos": 65, "end_pos": 67 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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{ "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QHY8-1", "uniprot_ac": "A0A5G2QHY8", "uniprot_id": "A0A5G2QHY8_PIG", "mass": { "chemical_mass": 55702.0, "monoisotopic_mass": 55702.0 }, "refseq": { "ac": "XP_005662236", "name": "zinc finger protein GLIS2 isoform X3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005662236" }, "gene_names": [ { "name": "GLIS2", "type": "recommended", "evidence": [ { "id": "A0A5G2QHY8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8" } ] }, { "name": "GLIS2", "type": "synonym", "evidence": [ { "id": "XP_005662236", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005662236" } ] } ], "protein_names": [ { "name": "Zinc finger protein GLIS2", "type": "recommended", "evidence": [ { "id": "A0A5G2QHY8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8/entry#names_and_taxonomy" } ] }, { "name": "GLI-similar 2", "type": "synonym", "evidence": [ { "id": "A0A5G2QHY8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8/entry#names_and_taxonomy" } ] }, { "name": "Neuronal Krueppel-like protein", "type": "synonym", "evidence": [ { "id": "A0A5G2QHY8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8/entry#names_and_taxonomy" } ] }, { "name": "zinc finger protein GLIS2 isoform X3", "type": "synonym", "evidence": [ { "id": "XP_005662236", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005662236" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GLIS2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8", "locus": { "chromosome": "3", "start_pos": 37998078, "end_pos": 38009024, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000023653", "url": "https://www.ensembl.org/id/ENSSSCG00000023653" } ] } } ], "crossref": [ { "id": "A0A5G2QHY8", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QHY8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000023653", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000023653", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100624334", "url": "https://www.ncbi.nlm.nih.gov/gene/100624334", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043359", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043359", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056436", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056436", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "EAGYCCH", "url": "https://omabrowser.org/oma/group/EAGYCCH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QHY8", "url": "https://www.orthodb.org/?gene=A0A5G2QHY8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR45718", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45718", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45718:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45718:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23561", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23561", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005662236", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005662236", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QHY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QHY8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MHSLDEPLDLKLSITKLRAAREKRERTLSAVRHRALHRELGLVDDSPTPGSPGSPPSGFLLNPKFPEKVEGRFSAAPLVDLSLSPPSGLDSPNGSSSLSPERQGNGDLSAVPTGPDLQPLRYLDGVPSSFQFLLPLGSGGALHLPASSFLPPPKDKCLSPELPLPKQLVCRWAKCNQPFELLQDLVDHVNDYHVKPEKDAGYCCHWEGCARHGRGFNARYKMLIHIRTHTNEKPHRCPTCSKSFSRLENLKIHNRSHTGEKPYVCPYEGCNKRYSNSSDRFKHTRTHYVDKPYYCKMPGCHKRYTDPSSLRKHIKAHGHFVSHEQQELLQLRPPPKPPLPAPDGSPYVSGAQIIIPNPAALFGGPGLPGLPLPLAPGPLDLSALACGNGGGGGGAGGMGPGLPGPVLPLNLAKSPLLPSPFGAGGLGLPVVSLLAGSAGGKAEGEKGRGAMPARALGMEGRKTPLERTESSRSRPSPDGLPLLPGTVLDLSTGVNSAASSPEALAPGWVVIPPGSVLLKPAVVN", "length": 524, "header": "tr|A0A5G2QHY8-1|A0A5G2QHY8_PIG Isoform 1 of Zinc finger protein GLIS2 OS=Sus scrofa OX=9823 GN=GLIS2 PE=3 SV=1 CANONICAL=A0A5G2QHY8-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QHY8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8/entry", "sequence": { "sequence": "MHSLDEPLDLKLSITKLRAAREKRERTLSAVRHRALHRELGLVDDSPTPGSPGSPPSGFLLNPKFPEKVEGRFSAAPLVDLSLSPPSGLDSPNGSSSLSPERQGNGDLSAVPTGPDLQPLRYLDGVPSSFQFLLPLGSGGALHLPASSFLPPPKDKCLSPELPLPKQLVCRWAKCNQPFELLQDLVDHVNDYHVKPEKDAGYCCHWEGCARHGRGFNARYKMLIHIRTHTNEKPHRCPTCSKSFSRLENLKIHNRSHTGEKPYVCPYEGCNKRYSNSSDRFKHTRTHYVDKPYYCKMPGCHKRYTDPSSLRKHIKAHGHFVSHEQQELLQLRPPPKPPLPAPDGSPYVSGAQIIIPNPAALFGGPGLPGLPLPLAPGPLDLSALACGNGGGGGGAGGMGPGLPGPVLPLNLAKSPLLPSPFGAGGLGLPVVSLLAGSAGGKAEGEKGRGAMPARALGMEGRKTPLERTESSRSRPSPDGLPLLPGTVLDLSTGVNSAASSPEALAPGWVVIPPGSVLLKPAVVN", "length": 524, "header": "tr|A0A5G2QHY8-1|A0A5G2QHY8_PIG Isoform 1 of Zinc finger protein GLIS2 OS=Sus scrofa OX=9823 GN=GLIS2 PE=3 SV=1 CANONICAL=A0A5G2QHY8-1" }, "locus": { "chromosome": "3", "start_pos": 38004511, "end_pos": 38000004, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077736.1", "url": "https://www.ensembl.org/id/ENSSSCT00000077736.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064015.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064015.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 48, "start_aa": "Thr", "end_pos": 48, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr48", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Z3B3-1", "protein_name": "Zinc finger protein GLIS2", "gene_name": "GLIS2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MHSLDEPLDLKLSISKVRSAREKRERGPPGPRPRAVPPSAAAPPPVGESRGSARGGRRAGPGPGLLAHSKALEKRFPALPVMDLSLSPPPGVESPGGGSASLSPERHSDPPVPALPHDFQSLRYIDGIPGSFQFFLPLGAGGALHLPSFLPPPKDKRLSPELPLPKQLVCRWSKCNQFFDLLQDLVDHVNDFHVKPEKDAGYCCHWEGCARHGRGFNARYKMLIHIRTHTNEKPHRCPTCNKSFSRLENLKIHNRSHTGEKPYICPYEGCNKRYSNSSDRFKHTRTHYVEKPYYCKMPGCHKRYTDPSSLRKHIKAHGHFVSHEHHEMLKAHAPPKGSADAPYANGAQLLLPNPAALFAPHALPALPLPLAPAPLDLSALGCGAGGSLPALPGPALPLNGGGPLNLAKGPLLPSPFAAGGLGLPVMSLLAGGAKAEEAEGRKGGKEGRKAGGRRTEPGRLRAPPESLALLPGAVLDLSTGVGAAGSPPEALPPGWVVIPPGSLLLKPAVVN", "length": 511 }, "evidence": [ { "id": "A0A5G2QHY8", "url": "https://omabrowser.org/oma/group/A0A5G2QHY8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D3ZIA9-1", "protein_name": "Zinc finger protein GLIS2", "gene_name": "Glis2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MHSLDEPLDLKLSITKLRAAREKRERTLGVPRHHALHRELGLVDDSPTPGSPGSPPPGFLLNPKFPEKLDGRFSAAPLVDLSLSPPSGLDSPNGSSSLSPERQGNGDLPPLPTAVDFQPLRYLDGVPSSFQFFLPLGSGGALHLPASSFLTPPKDKCLSPELPLAKQLVCRWAKCNQLFELLQDLVDHVNDHHVKPEQDARYCCHWEGCARHGRGFNASRYKMLIHIRTHTNEKPHRCPTCNKSFSRLENLKIHNRSHTGEKPYVCPYEGCNKRYSNSSDRFKHTRTHYVDKPYYCKMPGCHKRYTDPSSLRKHIKAHGHFVSHEQQELLQLRPPPKPPLPTPDSGSYVSGAQIIIPNPAALFGGPSLPGLPLPLAPGPLDLSALACGNGGGGGGGMGPGLPGSVLPLNLAKNPLLPSPFGAGGLGLPVVSLLGGSAGSKAEGEKGRGSVPARVLGLEDHKTSLERTERSRSRPSPDGLPLLPGTVLDLSTGNSAASSPEALTPGWVVIPPGSVLLKPAVVN", "length": 522 }, "evidence": [ { "id": "A0A5G2QHY8", "url": "https://omabrowser.org/oma/group/A0A5G2QHY8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1BKE4-1", "protein_name": "Zinc finger protein GLIS2", "gene_name": "GLIS2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MHSLDEPLDLKLSITKLRAAREKRERTLSAARHRALHRELGLADDSPTPGSPGSPPSGFLLNPKFPEKVEGRFSAAPLVDLSLSPPSGLDSPNGSSSLSPERQGNGDLPTAPAGPDLQPLRYLDGVPSSFQFFLPLGSGGALHLPASSFLTPPKDKCLSPELPLPKQLVCRWAKCNQPFELLQDLVDHVNDYHVKPEKDAGYCCHWEGCARHGRGFNARYKMLIHIRTHTNEKPHRCPTCSKSFSRLENLKIHNRSHTGEKPYVCPYEGCNKRYSNSSDRFKHTRTHYVDKPYYCKMPGCHKRYTDPSSLRKHIKAHGHFVSHEQHELLQLRPPPKPPLPAPDGSPYVSGAQIIIPNPAALFGGPGLPGLPLPLAPGPLDLSALACGNGGGAGGAGGMGPGLPGPVLPLNLAKNPLLPSPFGAGGLGLPVVSLLAGSAGGKAEGEKGRGAMPARALSSEGRKTPLERTEGSRSRPSPDGLPLLPGTVLDLSTGVNSAASSPEALAPGWVVIPPGSVLLKPAVVN", "length": 524 }, "evidence": [ { "id": "A0A5G2QHY8", "url": "https://omabrowser.org/oma/group/A0A5G2QHY8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8VDL9-1", "protein_name": "Zinc finger protein GLIS2", "gene_name": "Glis2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHSLDEPLDLKLSITKLRAAREKRERTLGVVRHHALHRELGLVDDSPAPGSPGSPPPGFLLNPKFPEKVDGRFSAAPLVDLSLSPPSGLDSPNGSSSLSPECQGNGDLPPLPTAVDFQPLRYLDGVPSSFQFFLPLGSGGALHLPASSFLPPPKDKCLSPELPLAKQLVCRWAKCNQLFELLQDLVDHVNDHHVKPEQDARYCCHWEGCARHGRGFNARYKMLIHIRTHTNEKPHRCPTCNKSFSRLENLKIHNRSHTGEKPYVCPYEGCNKRYSNSSDRFKHTRTHYVDKPYYCKMPGCHKRYTDPSSLRKHIKAHGHFVSHEQQELLQLRPPPKPPLPTPDSGSYVSGAQIIIPNPAALFGGPSLPGLPLPLPPGPLDLSALACGNGGGGGGGIGPGLPGSVLPLNLAKNPLLPSPFGAGGLGLPVVSLLGGSAGSKAEGEKGRGSVPARVLGLEDHKTPLERTERSRSRPSPDGLPLLPGTVLDLSTGNSAASSPEVLTPGWVVIPPGSVLLKPAVVN", "length": 521 }, "evidence": [ { "id": "A0A5G2QHY8", "url": "https://omabrowser.org/oma/group/A0A5G2QHY8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BZE0-1", "protein_name": "Zinc finger protein GLIS2", "gene_name": "GLIS2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MHSLDEPLDLKLSITKLRAAREKRERTLGVVRPRALHRELGLVDDSPTPGSPGSPPSGFLLNSKFPEKVEGRFSAAPLVDLSLSPPSGLDSPNGSSSLSPERQGNGDLPPVPSASDFQPLRYLDGVPSSFQFFLPLGSGGALHLPASSFLTPPKDKCLSPDLPLPKQLVCRWAKCNQLFELLQDLVDHVNDYHVKPEKDAGYCCHWEGCARHGRGFNARYKMLIHIRTHTNEKPHRCPTCSKSFSRLENLKIHNRSHTGEKPYVCPYEGCNKRYSNSSDRFKHTRTHYVDKPYYCKMPGCHKRYTDPSSLRKHIKAHGHFVSHEQQELLQLRPPPKPPLPAPDGGPYVSGAQIIIPNPAALFGGPGLPGLPLPLAPGPLDLSALACGNGGGSGGGGGMGPGLPGPVLPLNLAKNPLLPSPFGAGGLGLPVVSLLAGAAGGKAEGEKGRGSVPTRALGMEGHKTPLERTESSCSRPSPDGLPLLPGTVLDLSTGVNSAASSPEALAPGWVVIPPGSVLLKPAVVN", "length": 524 }, "evidence": [ { "id": "A0A5G2QHY8", "url": "https://omabrowser.org/oma/group/A0A5G2QHY8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8" } ], "pmid": "" }, { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8" } ], "pmid": "" }, { "name": "non-motile cilium", "id": "GO:0097730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097730", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8" } ], "pmid": "" }, { "name": "nervous system development", "id": "GO:0007399", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007399", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8" } ], "pmid": "" }, { "name": "cell differentiation", "id": "GO:0030154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030154", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8" } ], "pmid": "" }, { "name": "negative regulation of smoothened signaling pathway", "id": "GO:0045879", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045879", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8" } ], "pmid": "" }, { "name": "DNA-binding transcription repressor activity, RNA polymerase II-specific", "id": "GO:0001227", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001227", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8" } ], "pmid": "" }, { "name": "DNA-binding transcription activator activity, RNA polymerase II-specific", "id": "GO:0001228", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001228", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 254, "end_pos": 256, "annotation": "n_glycosylation_sequon" }, { "start_pos": 276, "end_pos": 278, "annotation": "n_glycosylation_sequon" }, { "start_pos": 93, "end_pos": 95, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QHY8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 524, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QHY8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QHY8" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QHY8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHY8" }, { "id": "PS50157", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50157" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2H2-type", "eco_id": "ECO_0000259", "start_pos": 202, "end_pos": 234, "start_aa": "Tyr", "end_aa": "Pro", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 48 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 254, "end_pos": 256 }, { "start_pos": 276, "end_pos": 278 }, { "start_pos": 93, "end_pos": 95 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QI02-1", "uniprot_ac": "A0A5G2QI02", "uniprot_id": "A0A5G2QI02_PIG", "mass": { "chemical_mass": 69188.0, "monoisotopic_mass": 69188.0 }, "refseq": {}, "gene_names": [ { "name": "IQCB1", "type": "recommended", "evidence": [ { "id": "A0A5G2QI02", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI02" } ] } ], "protein_names": [ { "name": "IQ calmodulin-binding motif-containing protein 1", "type": "recommended", "evidence": [ { "id": "A0A5G2QI02", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI02/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Involved in ciliogenesis. The function in an early step in cilia formation depends on its association with CEP290/NPHP6. Involved in regulation of the BBSome complex integrity, specifically for presence of BBS2 and BBS5 in the complex, and in ciliary targeting of selected BBSome cargos. May play a role in controlling entry of the BBSome complex to cilia possibly implicating CEP290/NPHP6.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QI02", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI02#function" }, { "database": "UniProtKB", "id": "ARBA00053910", "url": "https://www.uniprot.org/uniprotkb/ARBA00053910#function" }, { "database": "UniProtKB", "id": "F1SQ17", "url": "https://www.uniprot.org/uniprotkb/F1SQ17#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QI02", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI02" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "IQCB1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI02", "locus": { "chromosome": "13", "start_pos": 138741367, "end_pos": 138681740, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011881", "url": "https://www.ensembl.org/id/ENSSSCG00000011881" } ] } } ], "crossref": [ { "id": "A0A5G2QI02", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QI02", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000011881", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011881", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd23767", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd23767", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000048", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000048", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR028765", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028765", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR15673", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15673", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15673:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15673:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00612", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00612", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-5620912", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5620912", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QI02", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI02", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QI02-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI02-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R6H8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6H8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R6H8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6H8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQ17", "url": "https://www.uniprot.org/uniprotkb/F1SQ17", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQ17-1", "url": "https://www.uniprot.org/uniprotkb/F1SQ17-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRNEANRYRPKDLSLAAEVAKSPEQNVPVILLKLKEIINNTPLGSSELKKIKQDIYCYDLMQYCLLVLSQDCSRIQGGWTTISQLTQILSHCCVGLEPGEDAEEFYNELLPSAAENFLVLGRQLQTCFINAAKGEEKDALLHFFQIVTDSLLWLLEGHVQLIQNVLQSDHFLHLLQTDSVQIGSTVMTMLQNILQINSGDLLRIEGKTLHSILDEVVFKLLSTPSPVIRSTATKLLLLMAESHQEILILLRLSGCYKELRSLLNKQEPGTEFSQELRQLIGLLSPKGYQEVEEQKLHQAACLIQAYWKGFQTRKRLKKLPSAVITLQRNFRSKRTKMLLKLNRQKEEEDHRLQLQLQRQRAMRLSRELRLSMLEIVHPGQVEKHNREIEEKSALIIQKHWRGYRERKNFRQQRPSLTEYKAAVTLQRAALKFLAKCRKKKKLFAPWQGLRELTDVRRVELQQQVDDYVRRHPGSQISDITSKELHSQAQERLQHYFMGRALEERSQQHREALMAQISTNIEQLLKAPSLKEAEGKEPELFVSRSRPVAAKAKQAHLTTLKHIQAPWWKKLGEEAEDEIDVPKDELSVELGTLFIGGTKPP", "length": 600, "header": "tr|A0A5G2QI02-1|A0A5G2QI02_PIG Isoform 1 of IQ calmodulin-binding motif-containing protein 1 OS=Sus scrofa OX=9823 GN=IQCB1 PE=4 SV=1 CANONICAL=A0A5G2QI02-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QI02-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI02/entry", "sequence": { "sequence": "MRNEANRYRPKDLSLAAEVAKSPEQNVPVILLKLKEIINNTPLGSSELKKIKQDIYCYDLMQYCLLVLSQDCSRIQGGWTTISQLTQILSHCCVGLEPGEDAEEFYNELLPSAAENFLVLGRQLQTCFINAAKGEEKDALLHFFQIVTDSLLWLLEGHVQLIQNVLQSDHFLHLLQTDSVQIGSTVMTMLQNILQINSGDLLRIEGKTLHSILDEVVFKLLSTPSPVIRSTATKLLLLMAESHQEILILLRLSGCYKELRSLLNKQEPGTEFSQELRQLIGLLSPKGYQEVEEQKLHQAACLIQAYWKGFQTRKRLKKLPSAVITLQRNFRSKRTKMLLKLNRQKEEEDHRLQLQLQRQRAMRLSRELRLSMLEIVHPGQVEKHNREIEEKSALIIQKHWRGYRERKNFRQQRPSLTEYKAAVTLQRAALKFLAKCRKKKKLFAPWQGLRELTDVRRVELQQQVDDYVRRHPGSQISDITSKELHSQAQERLQHYFMGRALEERSQQHREALMAQISTNIEQLLKAPSLKEAEGKEPELFVSRSRPVAAKAKQAHLTTLKHIQAPWWKKLGEEAEDEIDVPKDELSVELGTLFIGGTKPP", "length": 600, "header": "tr|A0A5G2QI02-1|A0A5G2QI02_PIG Isoform 1 of IQ calmodulin-binding motif-containing protein 1 OS=Sus scrofa OX=9823 GN=IQCB1 PE=4 SV=1 CANONICAL=A0A5G2QI02-1" }, "locus": { "chromosome": "13", "start_pos": 138740879, "end_pos": 138689549, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089059.1", "url": "https://www.ensembl.org/id/ENSSSCT00000089059.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061628.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061628.1" } ] } }, { "isoform_ac": "A0A5G2R6H8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6H8/entry", "sequence": { "sequence": "MKPTGTDPRLSLAAEVAKSPEQNVPVILLKLKEIINNTPLGSSELKKIKQDIYCYDLMQYCLLVLSQDCSRIQGGWTTISQLTQILSHCCVGLEPGEDAEEFYNELLPSAAENFLVLGRQLQTCFINAAKGEEKDALLHFFQIVTDSLLWLLEGHVQLIQNVLQSDHFLHLLQTDSVQIGSTVMTMLQNILQINRSKRTKMLLKLNRQKEEEDHRLQLQLQRQRAMRLSRELRLSMLEIVHPGQVEKHNREIEEKSALIIQKHWRGYRERKNFRQQRPSLTEYKAAVTLQRAALKFLAKCRKKKKLFAPWQGLRELTDVRRVELQQQVDDYVRRHPGSQISDITSKELHSQAQERLQHYFMGRALEERSQQHREALMAQISTNIEQLLKAPSLKEAEGKEPELFVSRSRPVAAKAKQAHLTTLKHIQAPWWKKLGEEAEDEIDVPKDELSVELGTLFIGGTKPP", "length": 464, "header": "tr|A0A5G2R6H8-1|A0A5G2QI02_PIG Computationally mapped isoform of IQ calmodulin-binding motif-containing protein 1 OS=Sus scrofa OX=9823 GN=IQCB1 PE=4 SV=1 CANONICAL=A0A5G2QI02-1" }, "locus": { "chromosome": "13", "start_pos": 138740879, "end_pos": 138689556, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088092.2", "url": "https://www.ensembl.org/id/ENSSSCT00000088092.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072857.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072857.1" } ] } }, { "isoform_ac": "F1SQ17-1", "url": "https://www.uniprot.org/uniprotkb/F1SQ17/entry", "sequence": { "sequence": 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"MQLSMVKFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGLEERPQRKAQPAQPADEPAEKADEPMEH", "length": 269, "header": "tr|A0A5G2QI19-1|A0A5G2QI19_PIG Isoform 1 of Proteasome subunit alpha type OS=Sus scrofa OX=9823 GN=PSMA1 PE=1 SV=2 CANONICAL=A0A5G2QI19-1" }, "locus": { "chromosome": "2", "start_pos": 44754981, "end_pos": 44648247, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070441.2", "url": "https://www.ensembl.org/id/ENSSSCT00000070441.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074583.2", "url": "https://www.ensembl.org/id/ENSSSCP00000074583.2" } ] } }, { "isoform_ac": "F2Z5L7-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5L7/entry", "sequence": { "sequence": "MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGLEERPQRKAQPAQPADEPAEKADEPMEH", "length": 263, "header": "tr|F2Z5L7-1|F2Z5L7_PIG Computationally mapped isoform of Proteasome subunit alpha type OS=Sus scrofa OX=9823 GN=PSMA1 PE=1 SV=1 CANONICAL=A0A5G2QI19-1" }, "locus": { "chromosome": "2", "start_pos": 44754981, "end_pos": 44740236, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014628.4", "url": "https://www.ensembl.org/id/ENSSSCT00000014628.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014233.2", "url": "https://www.ensembl.org/id/ENSSSCP00000014233.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QI19", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI19" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100516779", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100516779", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "G3HSE4-1", "protein_name": "Proteasome subunit alpha type", "gene_name": "Psma1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLDELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLDGLEERPQRKAQPSQAADEPAEKADEPMEH", "length": 263 }, "evidence": [ { "id": "A0A5G2QI19", "url": "https://omabrowser.org/oma/group/A0A5G2QI19/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P12881-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Prosalpha6", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MFRNQYDSDVTVWSPQGRLHQVEYAMEAVKLGTATVGLKNKDYAVLVALCKPTSELSDTQRKIIPIDDHLGISIAGLTADARVLSRYLRSECLNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLLVAGYDERGPHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIRHGIRAILGTLPTDEQGKDAGQYDITVAIVGKDQPFTILSNKDSAKHVAIAKENDNDTPRNDDDDDRPSPPEEPAAGPRDPEVLVATEQRP", "length": 279 }, "evidence": [ { "id": "A0A5G2QI19", "url": "https://omabrowser.org/oma/group/A0A5G2QI19/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "P18420-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Psma1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMGPHVFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMQCNLDELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLDGLEERPQRKAQPSQAADEPAEKADEPMEH", "length": 263 }, "evidence": [ { "id": "A0A5G2QI19", "url": "https://omabrowser.org/oma/group/A0A5G2QI19/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P25786-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "PSMA1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGLEERPQRKAQPAQPADEPAEKADEPMEH", "length": 263 }, "evidence": [ { "id": "A0A5G2QI19", "url": "https://omabrowser.org/oma/group/A0A5G2QI19/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P40302-1", "protein_name": "Proteasome subunit alpha type-6", "gene_name": "PRE5", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MFRNNYDGDTVTFSPTGRLFQVEYALEAIKQGSVTVGLRSNTHAVLVALKRNADELSSYQKKIIKCDEHMGLSLAGLAPDARVLSNYLRQQCNYSSLVFNRKLAVERAGHLLCDKAQKNTQSYGGRPYGVGLLIIGYDKSGAHLLEFQPSGNVTELYGTAIGARSQGAKTYLERTLDTFIKIDGNPDELIKAGVEAISQSLRDESLTVDNLSIAIVGKDTPFTIYDGEAVAKYI", "length": 234 }, "evidence": [ { "id": "A0A5G2QI19", "url": "https://omabrowser.org/oma/group/A0A5G2QI19/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q27562-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "psmA1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYRNQYDSDITTFSPSGRIHQIEYAMEAVKQGGAAVALKSKQFAVLVSLKRSSSELGSYQKKIFVVDDHVGIAISGLTADARMLCNYMRNECSNYNYVYESQMRVERLVTKVADKHQVHTQRYGRRPYGVGLLVAGYDQLGAHIYQTCPSGNFYDYKSISIGSRSQSAKTYLEKHFESFEECTLEQLITHGLRALRETIPNTDDTLNSKNVSIGIVGEGQPFKIIEEADAQPYLNLLENEEPVEMQTN", "length": 248 }, "evidence": [ { "id": "A0A5G2QI19", "url": "https://omabrowser.org/oma/group/A0A5G2QI19/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q3T0X5-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "PSMA1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGLEERPQRKAQPTQPADEPAEKADEPMEH", "length": 263 }, "evidence": [ { "id": "A0A5G2QI19", "url": "https://omabrowser.org/oma/group/A0A5G2QI19/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9R1P4-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "Psma1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLDELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLDGLEERPQRKAQPSQAAEEPAEKADEPMEH", "length": 263 }, "evidence": [ { "id": "A0A5G2QI19", "url": "https://omabrowser.org/oma/group/A0A5G2QI19/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QI19", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI19" } ], "pmid": "" }, { "name": "nuclear body", "id": "GO:0016604", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016604", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QI19", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI19" } ], "pmid": "" }, { "name": "proteasome core complex, alpha-subunit complex", "id": "GO:0019773", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019773", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QI19", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI19" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QI19", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI19" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "response to oxidative stress", "id": "GO:0006979", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006979", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QI19", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI19" } ], "pmid": "" }, { "name": "negative regulation of inflammatory response to antigenic stimulus", "id": "GO:0002862", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002862", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QI19", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI19" } ], "pmid": "" }, { "name": "proteasome-mediated ubiquitin-dependent protein catabolic process", "id": "GO:0043161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043161", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QI19", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI19" } ], "pmid": "" }, { "name": "regulation of proteasomal protein catabolic process", "id": "GO:0061136", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061136", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QI19", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI19" } ], "pmid": "" }, { "name": "ubiquitin-dependent protein catabolic process", "id": "GO:0006511", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006511", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QI19", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI19" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "lipopolysaccharide binding", "id": "GO:0001530", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001530", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QI19", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI19" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 215, "end_pos": 217, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QI19-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 269, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QI19-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QI19" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QI19", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI19" }, { "id": "PS00388", "database": "PROSITE", "url": "https://prosite.expasy.org/PS00388" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Proteasome alpha-type subunits", "eco_id": "ECO_0000259", "start_pos": 12, "end_pos": 34, "start_aa": "Tyr", "end_aa": "Ala", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 215, "end_pos": 217 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QIC6-1", "uniprot_ac": "A0A5G2QIC6", "uniprot_id": "A0A5G2QIC6_PIG", "mass": { "chemical_mass": 45098.0, "monoisotopic_mass": 45098.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "HSF-type DNA-binding domain-containing protein", "type": "recommended", "evidence": [ { "id": "A0A5G2QIC6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIC6/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIC6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIC6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIC6", "locus": {} } ], "crossref": [ { "id": "A0A5G2QIC6", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QIC6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000044850", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000044850", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR000232", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000232", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036388", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036388", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036390", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036390", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR10015", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10015", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10015:SF336", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10015:SF336", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00447", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00447", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QIC6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIC6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QIC6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIC6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAHAPSEIQPVSPKDAPTGSESSITSPWCDNSITGDLDLRSQSEEKAFQALSEGSLMKEPCHTLSASEPDEDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIMINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGLTKLQRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFNRGCPHLLVRMKRRASLLQGCNKKRSRTGGNVDNHNSDVVAETHGEDAFSTSTNLNVPLIRWPSMSHRISNTNTPTRSGLSSPSSPSFRPPGQIVMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYHRISNFPRGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSELSKDYRLCRRVKMKI", "length": 401, "header": "tr|A0A5G2QIC6-1|A0A5G2QIC6_PIG Isoform 1 of HSF-type DNA-binding domain-containing protein OS=Sus scrofa OX=9823 GN= PE=3 SV=1 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"MPIQEKEASKKEVILLAKMKHPNIVSFFSSFQENGRLFIVMEYCDGGDLMKRIKRQRGVLFREDQILSWFVQISLGLKHIHDRKILHRDIKAQNVFLSQNGMVAKLGDFGIARVLNNTMELARTCVGTPYYLSPEICQNKPYNNKTDIWSLGCVLYELCTLKHPFEGNNLPQLVLKICRAHIAPVSPRFSRDLQSLISQLFEVSPRDRPSINSILRRPFLERLIVNHLTPEVIREEFTHTLIHQARASASQPAGRVVPDSGIQRVRFQGKCPPGSRLSVPKKRKDIFYRHEWRPPAGAQKPISTAMVERPKLAAVRGHYAYFYAQLDGLRDRAHGPNCHHDPQKDTEVEETYNLAEIHSPPPGQRTAEYLQRKREAQQYKLKVEKQLGLRPSSAEPNHEQRQEPRSDGEEPGFQGPQFRRNETKEQEYWKQLEQIRQQYHSDMKAIRKKMGCALEEDSEISHKTYLVKKSDRPIHQEAPEEEAPVQAIERDLKQSRLQSRKESKIPEPKHKAKRGVKFEINLDKCISDENILQEEEAMDVLNETLTFEDGLKFKEYTGIKEHGDDTDKALEKLCCPGAEFFVQDAAAAENRRQWDAEAPQTLLQMMAMADVTSTCSTVPEDGHGMVIDGLPESRKQWRHQAPATLMSVLAAAQLTNSSFSANSGEFAVGTLKQWLPTEDEGKVEMASDVEVDGEPEPRSDDDDDTNFEESEDELRNEVLESLEKLTTSKEAEKREEVSGSSKDNENLREGTGMQKYAELNKGLENISTLSDDKLCVAEDDHGTPTTSQNIQV", "length": 792, "header": "tr|A0A5G2QIV8-1|A0A5G2QIV8_PIG Isoform 1 of non-specific serine/threonine protein kinase OS=Sus scrofa OX=9823 GN=NEK5 PE=3 SV=2 CANONICAL=A0A5G2QIV8-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QIV8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIV8/entry", "sequence": { "sequence": "MPIQEKEASKKEVILLAKMKHPNIVSFFSSFQENGRLFIVMEYCDGGDLMKRIKRQRGVLFREDQILSWFVQISLGLKHIHDRKILHRDIKAQNVFLSQNGMVAKLGDFGIARVLNNTMELARTCVGTPYYLSPEICQNKPYNNKTDIWSLGCVLYELCTLKHPFEGNNLPQLVLKICRAHIAPVSPRFSRDLQSLISQLFEVSPRDRPSINSILRRPFLERLIVNHLTPEVIREEFTHTLIHQARASASQPAGRVVPDSGIQRVRFQGKCPPGSRLSVPKKRKDIFYRHEWRPPAGAQKPISTAMVERPKLAAVRGHYAYFYAQLDGLRDRAHGPNCHHDPQKDTEVEETYNLAEIHSPPPGQRTAEYLQRKREAQQYKLKVEKQLGLRPSSAEPNHEQRQEPRSDGEEPGFQGPQFRRNETKEQEYWKQLEQIRQQYHSDMKAIRKKMGCALEEDSEISHKTYLVKKSDRPIHQEAPEEEAPVQAIERDLKQSRLQSRKESKIPEPKHKAKRGVKFEINLDKCISDENILQEEEAMDVLNETLTFEDGLKFKEYTGIKEHGDDTDKALEKLCCPGAEFFVQDAAAAENRRQWDAEAPQTLLQMMAMADVTSTCSTVPEDGHGMVIDGLPESRKQWRHQAPATLMSVLAAAQLTNSSFSANSGEFAVGTLKQWLPTEDEGKVEMASDVEVDGEPEPRSDDDDDTNFEESEDELRNEVLESLEKLTTSKEAEKREEVSGSSKDNENLREGTGMQKYAELNKGLENISTLSDDKLCVAEDDHGTPTTSQNIQV", "length": 792, "header": "tr|A0A5G2QIV8-1|A0A5G2QIV8_PIG Isoform 1 of non-specific serine/threonine protein kinase OS=Sus scrofa OX=9823 GN=NEK5 PE=3 SV=2 CANONICAL=A0A5G2QIV8-1" }, "locus": { "chromosome": "11", "start_pos": 15859598, "end_pos": 15806017, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000085225.2", "url": "https://www.ensembl.org/id/ENSSSCT00000085225.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061954.2", "url": "https://www.ensembl.org/id/ENSSSCP00000061954.2" } ] } }, { "isoform_ac": "F1RMC9-1", "url": "https://www.uniprot.org/uniprotkb/F1RMC9/entry", "sequence": { "sequence": "MPIQEKEASKKEVILLAKMKHPNIVSFFSSFQENGRLFIVMEYCDGGDLMKRIKRQRGVLFREDQILSWFVQISLGLKHIHDRKILHRDIKAQNVFLSQNGMVAKLGDFGIARVLNNTMELARTCVGTPYYLSPEICQNKPYNNKTDIWSLGCVLYELCTLKHPFEGNNLPQLVLKICRAHIAPVSPRFSRDLQSLISQLFEVSPRDRPSINSILRRPFLERLIVNHLTPEVIREEFTHTLIHQARASASQPAGRVVPDSGIQRVRFQGKCPPGSRLSVPKKRKDIFYRHEWRPPAGAQKPISTAMVERPKLAAVRGHYAYFYAQLDGLRDRAHGPNCHHDPQKDTEVEETYNLAEIHSPPPGQRTAEYLQRKREAQQYKLKVEKQLGLRPSSAEPNHEQRQEPRSDGEEPGFQGPQFRRNETKEQEYWKQLEQIRQQYHSDMKAIRKKMGCALEEDSEISHKTYLVKKSDRPIHQEAPEEEAPVQAIERDLKQSRLQSRKESKIPEPKHKAKRGVKFEINLDKCISDENILQEEEAMDVLNETLTFEDGLKFKEYTGIKEHGDDTDKALEKLCCPGAEFFVQDAAAAENRRQWDAEAPQTLLQMMAMADVTSTCSTVPEGEAHISGINCQLVGSKALNSLVLTLMS", "length": 647, "header": "tr|F1RMC9-1|A0A5G2QIV8_PIG Computationally mapped isoform of non-specific serine/threonine protein kinase OS=Sus scrofa OX=9823 GN=NEK5 PE=3 SV=5 CANONICAL=A0A5G2QIV8-1" }, "locus": { "chromosome": "11", "start_pos": 15848271, "end_pos": 15806017, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000010277.5", "url": "https://www.ensembl.org/id/ENSSSCT00000010277.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000010009.5", "url": "https://www.ensembl.org/id/ENSSSCP00000010009.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1RMC9", "url": "https://www.uniprot.org/uniprotkb/F1RMC9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIV8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIV8" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIV8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIV8" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIV8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIV8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 116, "end_pos": 118, "annotation": "n_glycosylation_sequon" }, { "start_pos": 144, "end_pos": 146, "annotation": "n_glycosylation_sequon" }, { "start_pos": 421, "end_pos": 423, "annotation": "n_glycosylation_sequon" }, { "start_pos": 542, "end_pos": 544, "annotation": "n_glycosylation_sequon" }, { "start_pos": 656, "end_pos": 658, "annotation": "n_glycosylation_sequon" }, { "start_pos": 765, "end_pos": 767, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "17989", "name": "", "equation": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "17989", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/17989" } ] }, { "id": "46608", "name": "", "equation": "L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "46608", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/46608" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QIV8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 792, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QIV8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QIV8" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QIV8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIV8" }, { "id": "PS50011", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50011" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Protein kinase", "eco_id": "ECO_0000259", "start_pos": 1, "end_pos": 220, "start_aa": "Met", "end_aa": "Leu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 116, "end_pos": 118 }, { "start_pos": 144, "end_pos": 146 }, { "start_pos": 421, "end_pos": 423 }, { "start_pos": 542, "end_pos": 544 }, { "start_pos": 656, "end_pos": 658 }, { "start_pos": 765, "end_pos": 767 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QIZ0-1", "uniprot_ac": "A0A5G2QIZ0", "uniprot_id": "A0A5G2QIZ0_PIG", "mass": { "chemical_mass": 61353.0, "monoisotopic_mass": 61353.0 }, "refseq": {}, "gene_names": [ { "name": "INSC", "type": "recommended", "evidence": [ { "id": "A0A5G2QIZ0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ0" } ] } ], "protein_names": [ { "name": "Protein inscuteable homolog", "type": "recommended", "evidence": [ { "id": "A0A5G2QIZ0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ0/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "May function as an adapter linking the Par3 complex to the GPSM1/GPSM2 complex. Involved in spindle orientation during mitosis. May regulate cell proliferation and differentiation in the developing nervous system. May play a role in the asymmetric division of fibroblasts and participate in the process of stratification of the squamous epithelium.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIZ0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ0#function" }, { "database": "UniProtKB", "id": "ARBA00054348", "url": "https://www.uniprot.org/uniprotkb/ARBA00054348#function" }, { "database": "UniProtKB", "id": "F1S991", "url": "https://www.uniprot.org/uniprotkb/F1S991#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIZ0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "INSC", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ0", "locus": { "chromosome": "2", "start_pos": 43843568, "end_pos": 44015191, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000013385", "url": "https://www.ensembl.org/id/ENSSSCG00000013385" } ] } } ], "crossref": [ { "id": "A0A5G2QIZ0", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QIZ0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000013385", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013385", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd21966", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd21966", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000225", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000225", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011989", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011989", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR031938", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031938", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038205", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038205", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039921", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039921", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045789", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045789", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR21386", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21386", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21386:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21386:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF16748", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16748", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF19427", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19427", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QIZ0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QIZ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S991", "url": "https://www.uniprot.org/uniprotkb/F1S991", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S991-1", "url": "https://www.uniprot.org/uniprotkb/F1S991-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "RRPPGNGEMASKGISGWGLWGRQEPRRLCCTGPNRCGQALLQIGVNLMALPGGRHLDCIPLQGQRLHLMQVDSVQRWMEDLKLMTECECMCVLQAKPISLEEDAQGDLILAGGPGPGDPLQLLLKRGWVISTELRRIGQKLAQDRWARVHSMSVRLTCHARSMVSEYSAVSRSSSQEMGQCLQVENEHVLKSMKACVSETLSMLGQHFGQLLELALTREVQALVRKIDASDNVYTTESTTGNLFSLTQEGAPLCRIIAKEGGVVALFKVCRQDSFRCLYPQALRTLASICCVEEGVHQLEKVDGVLCLADILTDDSHSEATRAEAAAVVAQVTSPHLPFTQHLSSFLESMEEIVTALVKLCQEASSGEVFLLASAALANITFLDTMACEMLLQLNAIRVLLEACSDKQRVDTPYTRDQIVTILANMSVLEQCASDIIQENGVQLIMGMLSEKPRSGTPAEVAACERVQQKAAVTLARLSRDPEVAREAVRLSCMSRLIELCRSPSERNSSDAVLVACLAALRRLAGVCPEGLQDSDFQQLVQPRLVDSFLLCSNMEESFV", "length": 560, "header": "tr|A0A5G2QIZ0-1|A0A5G2QIZ0_PIG Isoform 1 of Protein inscuteable homolog OS=Sus scrofa OX=9823 GN=INSC PE=4 SV=2 CANONICAL=A0A5G2QIZ0-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QIZ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ0/entry", "sequence": { "sequence": "RRPPGNGEMASKGISGWGLWGRQEPRRLCCTGPNRCGQALLQIGVNLMALPGGRHLDCIPLQGQRLHLMQVDSVQRWMEDLKLMTECECMCVLQAKPISLEEDAQGDLILAGGPGPGDPLQLLLKRGWVISTELRRIGQKLAQDRWARVHSMSVRLTCHARSMVSEYSAVSRSSSQEMGQCLQVENEHVLKSMKACVSETLSMLGQHFGQLLELALTREVQALVRKIDASDNVYTTESTTGNLFSLTQEGAPLCRIIAKEGGVVALFKVCRQDSFRCLYPQALRTLASICCVEEGVHQLEKVDGVLCLADILTDDSHSEATRAEAAAVVAQVTSPHLPFTQHLSSFLESMEEIVTALVKLCQEASSGEVFLLASAALANITFLDTMACEMLLQLNAIRVLLEACSDKQRVDTPYTRDQIVTILANMSVLEQCASDIIQENGVQLIMGMLSEKPRSGTPAEVAACERVQQKAAVTLARLSRDPEVAREAVRLSCMSRLIELCRSPSERNSSDAVLVACLAALRRLAGVCPEGLQDSDFQQLVQPRLVDSFLLCSNMEESFV", "length": 560, "header": "tr|A0A5G2QIZ0-1|A0A5G2QIZ0_PIG Isoform 1 of Protein inscuteable homolog OS=Sus scrofa OX=9823 GN=INSC PE=4 SV=2 CANONICAL=A0A5G2QIZ0-1" }, "locus": { "chromosome": "2", "start_pos": 44015170, "end_pos": 43844031, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000085528.2", "url": "https://www.ensembl.org/id/ENSSSCT00000085528.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061989.2", "url": "https://www.ensembl.org/id/ENSSSCP00000061989.2" } ] } }, { "isoform_ac": "F1S991-1", "url": "https://www.uniprot.org/uniprotkb/F1S991/entry", "sequence": { "sequence": "MMALPGGRHLDCIPLQGQRLHLMQVDSVQRWMEDLKLMTECECMCVLQAKPISLEEDAQGDLILAGGPGPGDPLQLLLKRGWVISTELRRIGQKLAQDRWARVHSMSVRLTCHARSMVSEYSAVSRSSSQEMGQCLQVENEHVLKSMKACVSETLSMLGQHFGQLLELALTREVQALVRKIDASDNVYTTESTTGNLFSLTQEGAPLCRIIAKEGGVVALFKVCRQDSFRCLYPQALRTLASICCVEEGVHQLEKVDGVLCLADILTDDSHSEATRAEAAAVVAQVTSPHLPFTQHLSSFLESMEEIVTALVKLCQEASSGEVFLLASAALANITFLDTMACEMLLQLNAIRVLLEACSDKQRVDTPYTRDQIVTILANMSVLEQCASDIIQENGVQLIMGMLSEKPRSGTPAEVAACERVQQKAAVTLARLSRDPEVAREAVRLSCMSRLIELCRSPSERNSSDAVLVACLAALRRLAGVCPEGLQDSDFQQLVQPRLVDSFLLCSNMEESFV", "length": 514, "header": "tr|F1S991-1|A0A5G2QIZ0_PIG Computationally mapped isoform of Protein inscuteable homolog OS=Sus scrofa OX=9823 GN=INSC PE=4 SV=6 CANONICAL=A0A5G2QIZ0-1" }, "locus": { "chromosome": "2", "start_pos": 43973858, "end_pos": 43844031, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014620.5", "url": "https://www.ensembl.org/id/ENSSSCT00000014620.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014225.5", "url": "https://www.ensembl.org/id/ENSSSCP00000014225.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S991", "url": "https://www.uniprot.org/uniprotkb/F1S991" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "regulation of asymmetric cell division", "id": "GO:0009786", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009786", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIZ0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ0" } ], "pmid": "" }, { "name": "nervous system development", "id": "GO:0007399", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007399", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIZ0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ0" } ], "pmid": "" }, { "name": "cell differentiation", "id": "GO:0030154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030154", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIZ0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ0" } ], "pmid": "" }, { "name": "regulation of protein stability", "id": "GO:0031647", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031647", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIZ0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ0" } ], "pmid": "" }, { "name": "asymmetric cell division", "id": "GO:0008356", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008356", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIZ0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ0" } ], "pmid": "" }, { "name": "apical protein localization", "id": "GO:0045176", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045176", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIZ0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "apical cortex", "id": "GO:0045179", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045179", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIZ0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ0" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIZ0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ0" } ], "pmid": "" }, { "name": "protein-containing complex", "id": "GO:0032991", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032991", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIZ0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "protein domain specific binding", "id": "GO:0019904", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019904", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIZ0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ0" } ], "pmid": "" }, { "name": 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QIZ8-1", "uniprot_ac": "A0A5G2QIZ8", "uniprot_id": "A0A5G2QIZ8_PIG", "mass": { "chemical_mass": 34275.0, "monoisotopic_mass": 34275.0 }, "refseq": { "ac": "XP_020937977", "name": "olfactory receptor 18-like", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020937977" }, "gene_names": [ { "name": "LOC110259022", "type": "recommended", "evidence": [ { "id": "A0A5G2QIZ8", "database": "UniProtKB", "url": 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Classification" ] }, { "id": "IPR000725", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000725", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:110259022", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110259022", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FILFGDM", "url": "https://omabrowser.org/oma/group/FILFGDM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QIZ8", "url": "https://www.orthodb.org/?gene=A0A5G2QIZ8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR48001", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48001", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13853", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13853", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020937977", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020937977", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QIZ8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QIZ8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MELQNLTKVSEYYLLGLSDDPELQPFIFGLFLSMYLVAILGNMLIILAVSSDSHLHTPMYFFLSNLSLADIGFITTTVPKMLVNMQAHSKSITYAGCLTQVSFFFLFGCLDSLLLAVMAYDRFVAICYPLHYLVIIKPRLCGLLVLVSFFVSLLDSQIHCLMVSQLAFCKDVDIPHFFCDVPKLLHLACYDISTNYIVIFLAGTISGFLPISGISFSYYKIVSSILRVSSSGGRYKAFSTCGSHLSAVCLFYGTGLGVYLSSVVSSSPKKDVVASVMYTVVTPMLNPFIYSLRNKDIKSALWRIVSRIA", "length": 309, "header": "tr|A0A5G2QIZ8-1|A0A5G2QIZ8_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN=LOC110259022 PE=3 SV=1 CANONICAL=A0A5G2QIZ8-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QIZ8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ8/entry", "sequence": { "sequence": "MELQNLTKVSEYYLLGLSDDPELQPFIFGLFLSMYLVAILGNMLIILAVSSDSHLHTPMYFFLSNLSLADIGFITTTVPKMLVNMQAHSKSITYAGCLTQVSFFFLFGCLDSLLLAVMAYDRFVAICYPLHYLVIIKPRLCGLLVLVSFFVSLLDSQIHCLMVSQLAFCKDVDIPHFFCDVPKLLHLACYDISTNYIVIFLAGTISGFLPISGISFSYYKIVSSILRVSSSGGRYKAFSTCGSHLSAVCLFYGTGLGVYLSSVVSSSPKKDVVASVMYTVVTPMLNPFIYSLRNKDIKSALWRIVSRIA", "length": 309, "header": "tr|A0A5G2QIZ8-1|A0A5G2QIZ8_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN=LOC110259022 PE=3 SV=1 CANONICAL=A0A5G2QIZ8-1" }, "locus": { "chromosome": "AEMK02000341.1", "start_pos": 128210, "end_pos": 127284, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067110.1", "url": "https://www.ensembl.org/id/ENSSSCT00000067110.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064771.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064771.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIZ8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:110259022", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110259022", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D4AC18-1", "protein_name": "Olfactory receptor", "gene_name": "Or7e171d", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METYNLTRKLEFLLLGLSEDPELQFILFVLFLLIYLLTILGNVLIILAISSDSHLHSPMYFFLYNLSLSDLGFSSSTVPKMLINMQTHNKSITYAGCLTQVSFFILFGDMDSLLLAAMAYDRWVAICHPLHYQVILNPRLCTYLLIVSFFISLLSSQVHCLMVSQLTFCTNMEIPHFFCDVPELLKLSCSDPSIDNIVRIVLSIILGFLPVSGILYSYYKITSSIFKVPSLLGKYKVFSTCGSHLSVVCLFYGTGIGVYLSSTVSSSSRENVVASVMYTMVVPMMNPFIYSLRNKDIKKALQKIVRKIL", "length": 309 }, "evidence": [ { "id": "A0A5G2QIZ8", "url": "https://omabrowser.org/oma/group/A0A5G2QIZ8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TRF5-1", "protein_name": "Olfactory receptor", "gene_name": "Or7e168", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEPYNSTGTLEFILLGLSEDPELQFILFALFLLIYLLTVLGNVLIILAISCDSHLHSPMYFFLYNLSLADMGFSSTTIPKMLINLHAHNRSITYAECLTQVSFFILFGCMDSILLAVMAYDRWVAICHPLHYQVILNPCRCRYLVVMSFCISLIDSQVHCFMVSQLTFCTNIKIPHFFCDVPELVKLACSNTTINDIVMFLLSIITGFLPASGIFYSYYKITSSIFRVPSLLGKYKAFSTCGSHLSVVCLFYGTGIGVYLSSTVSSSSKESMVASVMYTMVVPMMNPFIYSLRNRDIKKALWKIVCKIT", "length": 309 }, "evidence": [ { "id": "A0A5G2QIZ8", "url": "https://omabrowser.org/oma/group/A0A5G2QIZ8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "G protein-coupled receptor activity", "id": "GO:0004930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004930", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIZ8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ8" } ], "pmid": "" }, { "name": "olfactory receptor activity", "id": "GO:0004984", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004984", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIZ8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIZ8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIZ8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIZ8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 5, "end_pos": 7, "annotation": "n_glycosylation_sequon" }, { "start_pos": 65, "end_pos": 67, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": 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Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 5, "end_pos": 7 }, { "start_pos": 65, "end_pos": 67 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QJ39-1", "uniprot_ac": "A0A5G2QJ39", "uniprot_id": "A0A5G2QJ39_PIG", "mass": { "chemical_mass": 63248.0, "monoisotopic_mass": 63248.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "UDP-glycosyltransferases domain-containing protein", "type": "recommended", "evidence": [ { "id": "A0A5G2QJ39", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ39/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJ39", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ39" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ39", "locus": {} } ], "crossref": [ { "id": "A0A5G2QJ39", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QJ39", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd03784", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03784", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100624891", "url": "https://www.ncbi.nlm.nih.gov/gene/100624891", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002213", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002213", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035595", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035595", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050271", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050271", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100624891", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624891", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A8W4FE19", "url": "https://www.orthodb.org/?gene=A0A8W4FE19", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR48043", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48043", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR48043:SF78", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48043:SF78", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00201", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00201", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "21032", "url": "https://www.rhea-db.org/rhea/21032", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QJ39", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ39", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJ39-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ39-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FE19", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE19", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FE19-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE19-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FMA4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FMA4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FMA4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FMA4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKTVKGFCVFFVLHLCFFDSGMTGKVLVWPMDFSHWMNLKVILEELQVRGHEITILMPSSSFLLDHAKLPFNVEILQISLSKESFVEKLIADLYTLSFEVPKLLWWNRQVKMTQMLRDFFLITRSICDSAVTNKELLSRLQAAKFDVCIADPLSFCGELVAELLNIPFVYSFRFSDGNVFERLCAGLPMPSSYVPSSTSGLTDNMTFVQRLENWLLYAVNVVIYTYFLFPEWDEYYSKVLGKPTTLCETMGKAEMWLIRTSWDFEFPHPSLPNFEYVGGLHCKPAKPLPKELEEFVQSSGKDGVVLFTLGSMVKNLTEEKSNMIASALAQLPQKVVWKYSGKKPETLGDNTRLYEWIPQNDVLGHPQTRAFITHCGTNGIYEAIYHGVPVVGIPLFGDQFDNIARVQAKGAAVQLDLLTMTSSDLLNALKAAINNPSYKENAMKLSRIHHDQPVKPLDRAVFWIEFVMRHKGAKHLRPAAHDLTWYQYHSLDVIGFLLACVAAITFLVTKCGLFCCRKLGKTARKKKRERSKLGATWQGPRGRKALLRREFDFSI", "length": 555, "header": "tr|A0A5G2QJ39-1|A0A5G2QJ39_PIG Isoform 1 of UDP-glycosyltransferases domain-containing protein OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A5G2QJ39-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QJ39-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ39/entry", "sequence": { "sequence": "MKTVKGFCVFFVLHLCFFDSGMTGKVLVWPMDFSHWMNLKVILEELQVRGHEITILMPSSSFLLDHAKLPFNVEILQISLSKESFVEKLIADLYTLSFEVPKLLWWNRQVKMTQMLRDFFLITRSICDSAVTNKELLSRLQAAKFDVCIADPLSFCGELVAELLNIPFVYSFRFSDGNVFERLCAGLPMPSSYVPSSTSGLTDNMTFVQRLENWLLYAVNVVIYTYFLFPEWDEYYSKVLGKPTTLCETMGKAEMWLIRTSWDFEFPHPSLPNFEYVGGLHCKPAKPLPKELEEFVQSSGKDGVVLFTLGSMVKNLTEEKSNMIASALAQLPQKVVWKYSGKKPETLGDNTRLYEWIPQNDVLGHPQTRAFITHCGTNGIYEAIYHGVPVVGIPLFGDQFDNIARVQAKGAAVQLDLLTMTSSDLLNALKAAINNPSYKENAMKLSRIHHDQPVKPLDRAVFWIEFVMRHKGAKHLRPAAHDLTWYQYHSLDVIGFLLACVAAITFLVTKCGLFCCRKLGKTARKKKRERSKLGATWQGPRGRKALLRREFDFSI", "length": 555, "header": "tr|A0A5G2QJ39-1|A0A5G2QJ39_PIG Isoform 1 of UDP-glycosyltransferases domain-containing protein OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A5G2QJ39-1" }, "locus": { "chromosome": "8", "start_pos": 66599067, "end_pos": 66571683, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081961.2", "url": "https://www.ensembl.org/id/ENSSSCT00000081961.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063941.2", "url": "https://www.ensembl.org/id/ENSSSCP00000063941.2" } ] } }, { "isoform_ac": "A0A8W4FE19-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE19/entry", "sequence": { "sequence": "MKTVKGFCVFFVLHLCFFDSGMTGKVLVWPMDFSHWMNLKVILEELQVRGHEITILMPSSSFLLDHAKLPFNVEILQISLSKESFVEKLIADLYTLSFEVPKLLWWNRQVKMTQMLRDFFLITRSICDSAVTNKELLSRLQAAKFDVCIADPLSFCGELVAELLNIPFVYSFRFSDGNVFERLCAGLPMPSSYVPSSTSGLTDNMTFVQRLENWLLYAVNVVIYTYFLFPEWDEYYSKVLGKPTTLCETMGKAEMWLIRTSWDFEFPHPSLPNFEYVGGLHCKPAKPLPKELEEFVQSSGKDGVVLFTLGSMVKNLTEEKSNMIASALAQLPQKVVWKYSGKKPETLGDNTRLYEWIPQNDVLGHPQTRAFITHCGTNGIYEAIYHGVPVVGIPLFGDQFDNIARVQAKGAAVQLDLLTMTSSDLLNALKAAINNPSYKENAMKLSRIHHDQPVKPLDRAVFWIEFVMRHKGAKHLRPAAHDLTWYQYHSLDVIGFLLACVAAITFLVTKCGLFCCRKLGKTARKKKRE", "length": 529, "header": "tr|A0A8W4FE19-1|A0A5G2QJ39_PIG Computationally mapped isoform of UDP-glycosyltransferases domain-containing protein OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A5G2QJ39-1" }, "locus": { "chromosome": "8", "start_pos": 66599067, "end_pos": 66572598, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000098439.1", "url": "https://www.ensembl.org/id/ENSSSCT00000098439.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077100.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077100.1" } ] } }, { "isoform_ac": "A0A8W4FMA4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FMA4/entry", "sequence": { "sequence": "MKTVKGFCVFFVLHLCFFDSGMTGKVLVWPMDFSHWMNLKVILEELQVRGHEITILMPSSSFLLDHAKLPFNVEILQISLSKESFVEKLIADLYTLSFEVPKLLWWNRQVKMTQMLRDFFLITRSICDSAVTNKELLSRLQAAKFDVCIADPLSFCGELVAELLNIPFVYSFRFSDGNVFERLCAGLPMPSSYVPSSTSGLTDNMTFVQRLENWLLYAVNVVIYTYFLFPEWDEYYSKVLGKPTTLCETMGKAEMWLIRTSWDFEFPHPSLPNFEYVGGLHCKPAKPLPKELEEFVQSSGKDGVVLFTLGSMVKNLTEEKSNMIASALAQLPQKVVWKYSGKKPETLGDNTRLYEWIPQNDVLGHPQTRAFITHCGTNGIYEAIYHGVPVVGIPLFGDQFDNIARVQAINNPSYKENAMKLSRIHHDQPVKPLDRAVFWIEFVMRHKGAKHLRPAAHDLTWYQYHSLDVIGFLLACVAAITFLVTKCGLFCCRKLGKTARKKKRE", "length": 505, "header": "tr|A0A8W4FMA4-1|A0A5G2QJ39_PIG Computationally mapped isoform of UDP-glycosyltransferases domain-containing protein OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A5G2QJ39-1" }, "locus": { "chromosome": "8", "start_pos": 66599067, "end_pos": 66572598, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000101449.1", "url": "https://www.ensembl.org/id/ENSSSCT00000101449.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080480.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080480.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FE19", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE19" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100624891", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624891", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJ39", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ39" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "glucuronosyltransferase activity", "id": "GO:0015020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015020", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJ39", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ39" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 204, "end_pos": 206, "annotation": "n_glycosylation_sequon" }, { "start_pos": 315, "end_pos": 317, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "21032", "name": "", "equation": "glucuronate acceptor + UDP-alpha-D-glucuronate = acceptor beta-D-glucuronoside + UDP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "21032", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/21032" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 204, "end_pos": 206 }, { "start_pos": 315, "end_pos": 317 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QJ50-1", "uniprot_ac": "A0A5G2QJ50", "uniprot_id": "A0A5G2QJ50_PIG", "mass": { "chemical_mass": 146308.0, "monoisotopic_mass": 146308.0 }, "refseq": {}, "gene_names": [ { "name": "LOC100522401", "type": "recommended", "evidence": [ { "id": "A0A5G2QJ50", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ50" } ] } ], "protein_names": [ { "name": "FAM21/CAPZIP domain-containing protein", "type": "recommended", "evidence": [ { "id": "A0A5G2QJ50", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ50/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJ50", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ50" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LOC100522401", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ50", "locus": {} } ], "crossref": [ { "id": "ENSSSCG00000010401", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000010401", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR029341", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029341", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR21669", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21669", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21669:SF38", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21669:SF38", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15255", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15255", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QJ50", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ50", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJ50-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ50-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QL44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL44", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QL44-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL44-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QYI1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QYI1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QYI1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QYI1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R3P4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3P4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R3P4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3P4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R881", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R881", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R881-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R881-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FJB9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJB9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FJB9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJB9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SDV2", "url": "https://www.uniprot.org/uniprotkb/F1SDV2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SDV2-1", "url": "https://www.uniprot.org/uniprotkb/F1SDV2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMNQTTPDQERAPASEPVWERPWSVEEIRRSSQSWSLAADAGLLQFLQEFSQQTISRTHEIKKQVDGLIRETKATDCRLHNVFNDFLMLSNTQFIENRVYDEEVEEPVLKAETEKAEQEKTREQKEVDLIPKVQEAVNYGLQVLDSAFEQLDIKAGNSDSEEDDANERVELILEPKDLYIDRPLPYLIGSKLFMEQEDVGLGELSSEEGSVGSDRGSIADSEEENEEEESDEDFANHSDHDQNQHTAQMSDEEEDDDGCDIFADSEKEEEDIEDLEENSRPKRSRPTSFADELAARIKGDATNRMEEEQTTLSPGETKPRKTSKEKKERKTPSDDDEDNLFAPPKLTDEDFSPFGSRGGLFSGGKGLFDDEDEESDLFTEAPQDREARAPVNEASSSSKPGKKIPAGAVSVFLGDTDLFGTASAPSLKEPPKPEQPTPGKSSYLPASSGLFDDDDDDDFFAASHSKPSKTDKVKSTANIFDDEEGDLFKEKVAALPEATVNKTDENKARAEKKVTLPSSKNLKLSSETKTHKGLFSDEEDSEDLFSSQSVNKSKDASPLPSKLPTSVSLFDDEDEEDNLFGATTAKKQTSSLLTQSQEKAKPSEPSKKKASALLFSSDEEDQWNTTVSQTNSATDKSKGELRDSVAPQNQEVKTVKKTSLFEEEDEDDLFAIAKNSQKKTQRVSLLFEDDGDSGSSLFGSPPPSVPAATKKKETVSEVPPLLFSDEEEKEAQLGVKPVAKNVESTKKSSEVERTHVVEESEKEGPLNVSTQEAAKHSDLFSSSPLDKGTKSRTKTVLSLFDEEEDKTEEQNSFQAPKKEVGKSPDPDSRPKSTGVFQDEELLFSHKLQKDNDPDVDLFSGTKKTKLLEPSGGSLFGDDEEDDLFSSAKSHPLVPEKKKVVKKDHSVSSVKNQKHPEPSQGIKEKGMWKSETSQDSPGPAPFKTKEPSSRIWKIQANLAINPAALLPAAASQTSGMKPVLPELGVPSSEPGRIQSLESMPTLPGSGEAGVSFDLPAQADTLHSANKSRVKVRGKRRPQTRAARRLAAQESGEAEDMSIPRGFITQLAAGAISPGGRQPQPGAAGREGSSEEALAAAAPTWASGPVPGVDRSPFAKPLGQPREDDLFDSGDIFSKGVTSQSTGRRKAKAKAADSPAPAGGSKERSPMFPALSEAGSDDDLFQSVKPKPTKKANPFPLLEDEDDLFTDQKGKKNESKSNGQQDVTSKAQDIFEDDIFATEAIKPSQKIREKERTFDSNLFDDNIDIFADLTVKPKEKSKKKVEAKSIFDDDMDDIFSSGIQAKSTKPKSRSSQTVPEPRSEQKVSNIFDDPLNAFGGQ", "length": 1335, "header": "tr|A0A5G2QJ50-1|A0A5G2QJ50_PIG Isoform 1 of FAM21/CAPZIP domain-containing protein OS=Sus scrofa OX=9823 GN=LOC100522401 PE=1 SV=1 CANONICAL=A0A5G2QJ50-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QJ50-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ50/entry", "sequence": { "sequence": "MMNQTTPDQERAPASEPVWERPWSVEEIRRSSQSWSLAADAGLLQFLQEFSQQTISRTHEIKKQVDGLIRETKATDCRLHNVFNDFLMLSNTQFIENRVYDEEVEEPVLKAETEKAEQEKTREQKEVDLIPKVQEAVNYGLQVLDSAFEQLDIKAGNSDSEEDDANERVELILEPKDLYIDRPLPYLIGSKLFMEQEDVGLGELSSEEGSVGSDRGSIADSEEENEEEESDEDFANHSDHDQNQHTAQMSDEEEDDDGCDIFADSEKEEEDIEDLEENSRPKRSRPTSFADELAARIKGDATNRMEEEQTTLSPGETKPRKTSKEKKERKTPSDDDEDNLFAPPKLTDEDFSPFGSRGGLFSGGKGLFDDEDEESDLFTEAPQDREARAPVNEASSSSKPGKKIPAGAVSVFLGDTDLFGTASAPSLKEPPKPEQPTPGKSSYLPASSGLFDDDDDDDFFAASHSKPSKTDKVKSTANIFDDEEGDLFKEKVAALPEATVNKTDENKARAEKKVTLPSSKNLKLSSETKTHKGLFSDEEDSEDLFSSQSVNKSKDASPLPSKLPTSVSLFDDEDEEDNLFGATTAKKQTSSLLTQSQEKAKPSEPSKKKASALLFSSDEEDQWNTTVSQTNSATDKSKGELRDSVAPQNQEVKTVKKTSLFEEEDEDDLFAIAKNSQKKTQRVSLLFEDDGDSGSSLFGSPPPSVPAATKKKETVSEVPPLLFSDEEEKEAQLGVKPVAKNVESTKKSSEVERTHVVEESEKEGPLNVSTQEAAKHSDLFSSSPLDKGTKSRTKTVLSLFDEEEDKTEEQNSFQAPKKEVGKSPDPDSRPKSTGVFQDEELLFSHKLQKDNDPDVDLFSGTKKTKLLEPSGGSLFGDDEEDDLFSSAKSHPLVPEKKKVVKKDHSVSSVKNQKHPEPSQGIKEKGMWKSETSQDSPGPAPFKTKEPSSRIWKIQANLAINPAALLPAAASQTSGMKPVLPELGVPSSEPGRIQSLESMPTLPGSGEAGVSFDLPAQADTLHSANKSRVKVRGKRRPQTRAARRLAAQESGEAEDMSIPRGFITQLAAGAISPGGRQPQPGAAGREGSSEEALAAAAPTWASGPVPGVDRSPFAKPLGQPREDDLFDSGDIFSKGVTSQSTGRRKAKAKAADSPAPAGGSKERSPMFPALSEAGSDDDLFQSVKPKPTKKANPFPLLEDEDDLFTDQKGKKNESKSNGQQDVTSKAQDIFEDDIFATEAIKPSQKIREKERTFDSNLFDDNIDIFADLTVKPKEKSKKKVEAKSIFDDDMDDIFSSGIQAKSTKPKSRSSQTVPEPRSEQKVSNIFDDPLNAFGGQ", "length": 1335, "header": "tr|A0A5G2QJ50-1|A0A5G2QJ50_PIG Isoform 1 of FAM21/CAPZIP domain-containing protein OS=Sus scrofa OX=9823 GN=LOC100522401 PE=1 SV=1 CANONICAL=A0A5G2QJ50-1" }, "locus": { "chromosome": "14", "start_pos": 90640291, "end_pos": 90582545, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091321.2", "url": "https://www.ensembl.org/id/ENSSSCT00000091321.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062049.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062049.1" } ] } }, { "isoform_ac": "A0A5G2QL44-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL44/entry", "sequence": { "sequence": "QMNQTTPDQERAPASEPVWERPWSVEEIRRSSQSWSLAADAGLLQFLQEFSQQTISRTHEIKKQVDGLIRETKATDCRLHNVFNDFLMLSNTQFIENRVYDEEVEEPVLKAETEKAEQEKTREQKEVDLIPKVQEAVNYGLQVLDSAFEQLDIKAGNSDSEEDDANERVELILEPKDLYIDRPLPYLIGSKLFMEQEDVGLGELSSEEGSVGSDRGSIADSEEENEEEESDEDFANHSDHDQNQHTAQMSDEEEDDDGCDIFADSEKEEEDIEDLEENSRPKRSRPTSFADELAARIKGDATNRMEEEQTNDEDNLFAPPKLTDEDFSPFGSRGGLFSGGKGLFDDEDEESDLFTEAPQDREARAPVNEASSSSKPGKKIPAGAVSVFLGDTDLFGTASAPSLKEPPKPEQPTPGKSSYLPASSGLFDDDDDDDFFAASHSKPSKTDKVKSTANIFDDEEGDLFKEKVAALPEATVNKTDENKARAEKKVTLPSSKNLKLSSETKTHKGLFSDEEDSEDLFSSQSVNKSKDASPLPSKLPTSVSLFDDEDEEDNLFGATTAKKQTSSLLTQSQEKAKPSEPSKKKASALLFSSDEEDQWNTTVSQTNSATDKSKGELRDSVAPQNQEVKTVKKTSLFEEEDEDDLFAIAKNSQKKTQRVSLLFEDDGDSGSSLFGSPPPSVPAATKEGPLNVSTQEAAKHSDLFSSSPLDKGTKSRTKTVLSLFDEEEDKTEEQNSFQAPKKEVGKSPDPDSRPKSTGVFQDEELLFSHKLQKDNDPDVDLFSGTKKTKLLEPSGGSLFGDDEEDDLFSSAKSHPLVPEKKKVVKKDHSVSSVKNQKHPEPSQGIKEKGMWKSETSQANLAINPAALLPAAASQTSGMKPVLPELGVPSSEPGRIQSLESMPTLPGSGEAGVSFDLPAQADTLHSANKSRVKVRGKRRPQTRAARRLAAQESGEAEDMSIPRGFITQLAAGAISPGGRQPQPGAAGREGSSEEALAAAAPTWASGPVPGVDRSPFAKPLGQPREDDLFDSGDIFSKGVTSQSTGRRKAKAKAADSPAPAGGSKERSPMFPALSEAGSDDDLFQSVKPKPTKKANPFPLLEDEDDLFTDQKGKKNESKSNGQQDVTSKAQDIFEDDIFATEAIKPSQKIREKERTFDSNLFDDNIDIFADLTVKPKEKSKKKVEAKSIFDDDMDDIFSSGIQAKSTKPKSRSSQTVPEPRSEQKVSNIFDDPLNAFGGQ", "length": 1238, "header": "tr|A0A5G2QL44-1|A0A5G2QJ50_PIG Computationally mapped isoform of FAM21/CAPZIP domain-containing protein OS=Sus scrofa OX=9823 GN=LOC100522401 PE=1 SV=2 CANONICAL=A0A5G2QJ50-1" }, "locus": { "chromosome": "14", "start_pos": 90640291, "end_pos": 90582633, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084388.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084388.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062788.2", "url": "https://www.ensembl.org/id/ENSSSCP00000062788.2" } ] } }, { "isoform_ac": "A0A5G2QYI1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QYI1/entry", "sequence": { "sequence": "MNQTTPDQERAPASEPVWERPWSVEEIRRSSQSWSLAADAGRVYDEEVEEPVLKAETEKAEQEKTREQKEVDLIPKVQEAVNYGLQVLDSAFEQLDIKAGNSDSEEDDANERVELILEPKDLYIDRPLPYLIGSKLFMEQEDVGLGELSSEEGSVGSDRGSIADSEEENEEEESDEDFANHSDHDQNQHTAQMSDEEEDDDGCDIFADSEKEEEDIEDLEENSRPKRSRPTSFADELAARIKGDATNRMEEEQTTLSPGETKPRKTSKEKKERKTPSDDDEDNLFAPPKLTDEDFSPFGSRGGLFSGGKGLFDDEDEESDLFTEAPQDREARAPVNEASSSSKPGKKIPAGAVSVFLGDTDLFGTASAPSLKEPPKPEQPTPGKSSYLPASSGLFDDDDDDDFFAASHSKPSKTDKVKSTANIFDDEEGDLFKEKVAALPEATVNKTDENKARAEKKVTLPSSKNLKLSSETKTHKGLFSDEEDSEDLFSSQSVNKSKDASPLPSKLPTSVSLFDDEDEEDNLFGATTAKKQTSSLLTQSQEKAKPSEPSKKKASALLFSSDEEWNTTVSQTNSATDKSKGELRDSVAPQNQEVKTVKKTSLFEEEDEDDLFAIAKNSQKKTQRVSLLFEDDGDSGSSLFGSPPPSVPAATKKKETVSEVPPLLFSDEEEKEAQLGVKPVAKNVESTKKSSEVERTHVVEESEKEGPLNVSTQEAAKHSDLFSSSPLDKGTKSRTKTVLSLFDEEEDKTEEQNSFQAPKKEVGKSPDPDSRPKSTGVFQDEELLFSHKLQKDNDPDVDLFSGTKKTKLLEPSGGSLFGDDEEDDLFSSAKSHPLVPEKKKVVKKDHSVSSVKNQKHPEPSQGIKEKGMWKSETSQANLAINPAALLPAAASQTSGMKPVLPELGVPSSEPGRIQSLESMPTLPGSGEAGVSFDLPAQADTLHSANKSRVKVRGKRRPQTRAARRLAAQESGEAEDMSIPRGFITQLAAGAISPGGRQPQPGAAGREGSSEEALAAAAPTWASGPVPGVDRSPFAKPLGQPREDDLFDSGDIFSKGVTSQSTGRRKAKAKAADSPAPAGGSKERSPMFPALSEAGSDDDLFQSVKPKPTKKANPFPLLEDEDDLFTDQKGKKNESKSNGQQDVTSKAQDIFEDDIFATEAIKPSQKIREKERTFDSNLFDDNIDIFADLTVKPKEKSKKKVEAKSIFDDDMDDIFSSGIQAKSTKPKSRSSQTVPEPRSEQKVSNIFDDPLNAFGGQ", "length": 1256, "header": "tr|A0A5G2QYI1-1|A0A5G2QJ50_PIG Computationally mapped isoform of FAM21/CAPZIP domain-containing protein OS=Sus scrofa OX=9823 GN=LOC100522401 PE=1 SV=1 CANONICAL=A0A5G2QJ50-1" }, "locus": { "chromosome": "14", "start_pos": 90640291, "end_pos": 90582636, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066824.1", "url": "https://www.ensembl.org/id/ENSSSCT00000066824.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069971.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069971.1" } ] } }, { "isoform_ac": "A0A5G2R3P4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3P4/entry", "sequence": { "sequence": "QMNQTTPDQERAPASEPVWERPWSVEEIRRSSQSWSLAADAGLLQFLQEFSQQTISRTHEIKKQVDGLIRETKATDCRLHNVFNDFLMLSNTQFIENRVYDEEVEEPVLKAETEKAEQEKTREQKEVDLIPKVQEAVNYGLQVLDSAFEQLDIKAGNSDSEEDDANERVELILEPKDLYIDRPLPYLIGSKLFMEQEDVGLGELSSEEGSVGSDRGSIADSEEENEEEESDEDFANHSDHDQNQHTAQMSDEEEDDDGCDIFADSEKEEEDIEDLEENSRPKRSRPTSFADELAARIKGDATNRMEEEQTTLSPGETKPRKTSKEKKERKTPSDDDEDNLFAPPKLTDEDFSPFGSRGGLFSGGKGLFDDEDEESDLFTEAPQDREARAPVNEASSSSKPGKKIPAGAVSVFLGDTDLFGTASAPSLKEPPKPEQPTPGKSSYLPASSGLFDDDDDDDFFAASHSKPSKTDKVKSTANIFDDEEGDLFKEKVAALPEATVNKTDENKARAEKKVTLPSSKNLKLSSETKTHKGLFSDEEDSEDLFSSQSVNKSKDASPLPSKLPTSVSLFDDEDEEDNLFGATTAKKQTSSLLTQSQEKAKPSEPSKKKASALLFSSDEEDQWNTTVSQTNSATDKSKGELRDSVAPQNQEVKTVKKTSLFEEEDEDDLFAIAKNSQKKTQRVSLLFEDDGDSGSSLFGSPPPSVPAATKKKETVSEVPPLLFSDEEEKEAQLGVKPVAKNVESTKKSSEVERTHVVEESEKEGPLNVSTQEAAKHSDLFSSSPLDKGTKSRTKTVLSLFDEEEDKTEEQNSFQAPKKEVGKSPDPDSRPKSTGVFQDEELLFSHKLQKDNDPDVDLFSGTKKTKLLEPSGGSLFGDDEEDDLFSSAKSHPLVPEKKKVVKKDHSVSSVKNQKHPEPSQGIKEKGMWKSETSQANLAINPAALLPAAASQTSGMKPVLPELGVPSSEPGRIQSLESMPTLPGSGEAGVSFDLPAQADTLHSANKSRVKVRGKRRPQTRAARRLAAQESGEAEDMSIPRGFITQLAAGAISPGGRQPQPGAAGREGSSEEALAAAAPTWASGPVPGVDRSPFAKPLGQPREDDLFDSGDIFSKGVTSQSTGRRKAKAKAADSPAPAGGSKERSPMFPALSEAGSDDDLFQSVKPKPTKKANPFPLLEDEDDLFTDQKGKKNESKSNGQQDVTSKAQDIFEDDIFATEAIKPSQKIREKERTFDSNLFDDNIDIFADLTVKPKEKSKKKVEAKSIFDDDMDDIFSSGIQAKSTKPKSRSSQTVPEPRSEQKVSNIFDDPLNAFGGQ", "length": 1314, "header": "tr|A0A5G2R3P4-1|A0A5G2QJ50_PIG Computationally mapped isoform of FAM21/CAPZIP domain-containing protein OS=Sus scrofa OX=9823 GN=LOC100522401 PE=1 SV=2 CANONICAL=A0A5G2QJ50-1" }, "locus": { "chromosome": "14", "start_pos": 90640291, "end_pos": 90582633, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089540.2", "url": "https://www.ensembl.org/id/ENSSSCT00000089540.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071711.2", "url": "https://www.ensembl.org/id/ENSSSCP00000071711.2" } ] } }, { "isoform_ac": "A0A5G2R881-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R881/entry", "sequence": { "sequence": "QMNQTTPDQERAPASEPVWERPWSVEEIRRSSQSWSLAADAGLLQFLQEFSQQTISRTHEIKKQVDGLIRETKATDCRLHNVFNDFLMLSNTQFIENRVYDEEVEEPVLKAETEKAEQEKTREQKEVDLIPKVQEAVNYGLQVLDSAFEQLDIKAGNSDSEEDDANERVELILEPKDLYIDRPLPYLIGSKLFMEQEDVGLGELSSEEGSVGSDRGSIADSEEENEEEESDEDFANHSDHDQNQHTAQMSDEEEDDDGCDIFADSEKEEEDIEDLEENSRPKRSRPTSFADELAARIKGDATNRMEEEQTTLSPGETKPRKTSKEKKERKTPSDDDEDNLFAPPKLTDEDFSPFGSRGGLFSGGKGLFDDEDEESDLFTEAPQDREARAPVNEASSSSKPGKKIPAGAVSVFLGDTDLFGTASAPSLKEPPKPEQPTPGKSSYLPASSGLFDDDDDDDFFAASHSKPSKTDKVKSTANIFDDEEGDLFKEKVAALPEATVNKTDENKARAEKKVTLPSSKNLKLSSETKTHKGLFSDEEDSEDLFSSQSVNKSKDASPLPSKLPTSVSLFDDEDEEDNLFGATTAKKQTSSLLTQSQEKAKPSEPSKKKASALLFSSDEEDQWNTTVSQTNSATDKSKGELRDSVAPQNQEVKTVKKTSLFEEEDEDDLFAIAKNSQKKTQRVSLLFEDDGDSGSSLFGSPPPSVPAATKKKETVSEVPPLLFSDEEEKEAQLGVKPVAKNVESTKKSSEVERTHVVEESEKEGPLNVSTQEAAKHSDLFSSSPLDKGTKSRTKTVLSLFDEEEDKTEEQNSFQAPKKEVGKSPDPDSRPKSTGVFQDEELLFSHKLQKDNDPDVDLFSGTKKTKLLEPSGGSLFGDDEEDDLFSSAKSHPLANLAINPAALLPAAASQTSGMKPVLPELGVPSSEPGRIQSLESMPTLPGSGEAGVSFDLPAQADTLHSANKSRVKVRGKRRPQTRAARRLAAQESGEAEDMSIPRGFITQLAAGAISPGGRQPQPGAAGREGSSEEALAAAAPTWASGPVPGVDRSPFAKPLGQPREDDLFDSGDIFSKGVTSQSTGRRKAKAKAADSPAPAGGSKERSPMFPALSEAGSDDDLFQSVKPKPTKKANPFPLLEDEDDLFTDQKGKKNESKSNGQQDVTSKAQDIFEDDIFATEAIKPSQKIREKERTFDSNLFDDNIDIFADLTVKPKEKSKKKVEAKSIFDDDMDDIFSSGIQAKSTKPKSRSSQTVPEPRSEQKVSNIFDDPLNAFGGQ", "length": 1273, "header": "tr|A0A5G2R881-1|A0A5G2QJ50_PIG Computationally mapped isoform of FAM21/CAPZIP domain-containing protein OS=Sus scrofa OX=9823 GN=LOC100522401 PE=1 SV=2 CANONICAL=A0A5G2QJ50-1" }, "locus": { "chromosome": "14", "start_pos": 90640291, "end_pos": 90582633, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000073782.2", "url": "https://www.ensembl.org/id/ENSSSCT00000073782.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073478.2", "url": "https://www.ensembl.org/id/ENSSSCP00000073478.2" } ] } }, { "isoform_ac": "A0A8W4FJB9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJB9/entry", "sequence": { "sequence": "QMNQTTPDQERAPASEPVWERPWSVEEIRRSSQSWSLAADAGLLQFLQEFSQQTISRTHEIKKQVDGLIRETKATDCRLHNVFNDFLMLSNTQFIENRVYDEEVEEPVLKAETEKAEQEKTREQKEVDLIPKVQEAVNYGLQVLDSAFEQLDIKAGNSDSEEDDANERVELILEPKDLYIDRPLPYLIGSKLFMEQEDVGLGELSSEEGSVGSDRGSIADSEEENEEEESDEDFANHSDHDQNQHTAQMSDEEEDDDGCDIFADSEKEEEDIEDLEENSRPKRSRPTSFADELAARIKGDATNRMEEEQTTLSPGETKPRKTSKEKKERKTPSDDDEDNLFAPPKLTDEDFSPFGSRGGLFSGGKGLFDDEDEESDLFTEAPQDREARAPVNEASSSSKPGKKIPAGAVSVFLGDTDLFGTASAPSLKEPPKPEQPTPGKSSYLPASSGLFDDDDDDDFFAASHSKPSKTDKVKSTANIFDDEEGDLFKEKVAALPEATVNKTDENKARAEKKVTLPSSKNLKLSSETKTHKGLFSDEEDSEDLFSSQSVNKSKDASPLPSKLPTSVSLFDDEDEEDNLFGATTAKKQTSSLLTQSQEKAKPSEPSKKKASALLFSSDEEDQWNTTVSQTNSATDKSKGELRDSVAPQNQEVKTVKKTSLFEEEDEDDLFAIAKNSQKKTQRVSLLFEDDGDSGSSLFGSPPPSVPAATKKKETVSEVPPLLFSDEEEKEAQLGVKPVAKNVESTKKSSEVERTHVVEESEKEGPLNVSTQEAAKHSDLFSSSPLDKGTKSRTKTVLSLFDEEEDKTEEQNSFQAPKKEVGKSPDPDSRPKSTGVFQDEELLFSHKLQKDNDPDVDLFSGTKKTKLLEPSGGSLFGDDEEDDLFSSAKSHPLVPEKKKVVKKDHSVSSVKNQKHPEPSQGIKEKGMWKSETSQDSPGPAPFKTKEPSSRIWKIQANLAINPAALLPAAASQTSGMKPVLPELGVPSSEPGRIQSLESMPTLPGSGEAGVSFDLPAQADTLHSANKSRVKVRGKRRPQTRAARRLAAQESGEAEDMSIPRGFITQLAAGAISPGGRQPQPGAAGREGSSEEALAAAAPTWASGPVPGVDRSPFAKPLGQPREDDLFDSGDIFSKGVTSQSTGRRKAKAKAADSPAPAGGSKERSPMFPALSEAGSDDDLFQSVKPKPTKKANPFPLLEDEDDLFTDQKGKKNESKSNGQQDVTSKAQDIFEDDIFATEAIKPSQKIREKERTFDSNLFDDNIDIFADLTVKPKEKSKKKVEAKSIFDDDMDDIFSSGIQAKSTKPKSRSSQTVPEPRSEQKVSNIFDDPLNAFGGQ", "length": 1335, "header": "tr|A0A8W4FJB9-1|A0A5G2QJ50_PIG Computationally mapped isoform of FAM21/CAPZIP domain-containing protein OS=Sus scrofa OX=9823 GN=LOC100522401 PE=1 SV=1 CANONICAL=A0A5G2QJ50-1" }, "locus": { "chromosome": "14", "start_pos": 90640291, "end_pos": 90582633, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000103187.1", "url": "https://www.ensembl.org/id/ENSSSCT00000103187.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078398.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078398.1" } ] } }, { "isoform_ac": "F1SDV2-1", "url": "https://www.uniprot.org/uniprotkb/F1SDV2/entry", "sequence": { "sequence": "QMNQTTPDQERAPASEPVWERPWSVEEIRRSSQSWSLAADAGLLQFLQEFSQQTISRTHEIKKQVDGLIRETKATDCRLHNVFNDFLMLSNTQFIENRVYDEEVEEPVLKAETEKAEQEKTREQKEVDLIPKVQEAVNYGLQVLDSAFEQLDIKAGNSDSEEDDANERVELILEPKDLYIDRPLPYLIGSKLFMEQEDVGLGELSSEGTLLHQLFLLLLTFISRPTSFADELAARIKGDATNRMEEEQTTLSPGETKPRKTSKEKKERKTPSDDDEDNLFAPPKLTDEDFSPFGSRGGLFSGGKGLFDDEDEEVTSSSSKPGKKIPAGAVSVFLGDTDLFGTASAPSLKEPPKPEQPTPGKSSYLPASSGLFDDDDDDDFFAASHSKPSKTDKVKSTANIFDDEEGDLFKEKVAALPEATVNKTDENKARAEKKVTLPSSKNLKLSSETKTHKGLFSDEEDSEDLFSSQSVNKSKDASPLPSKLPTSVSLFDDEDEEDNLFGATTAKKQTSSLLTQSQEKAKPSEPSKKKASALLFSSDEEDQWNTTVSQTNSATDKSKGELRDSVAPQNQEVKTVKKTSLFEEEDEDDLFAIAKNSQKKTQRVSLLFEDDGDSGSSLFGSPPPSVPAATKKKETVSEVPPLLFSDEEEKEAQLGVKPVAKNVESTKKSSEVERTHVVEDRTKTVLSLFDEEEDKTEEQNSFQAPKKEVGKSPDPDSRPKSTGVFQDEELLFSHKLQKDNDPDVDLFSGTKKTKLLEPSGGSLFGDDEEDDLFSSAKSHPLVPEKKKVVKKDHSVSSVKNQKHPEPSQGIKEKGMWKSETSQDSPGPAPFKTKEPSSRIWKIQANLAINPAALLPAAASQTSGMKPVLPELGVPSSEPGRIQSLESMPTLPGSGEAGVSFDLPAQADTLHSANKSRVKVRGKRRPQTRAARRLAAQESGEAEDMSIPRGFITQLAAGAISPGGRQPQPGAAGREGSSEEALAAAAPTWASGPVPGVDRSPFAKPLGQPREDDLFDSGDIFSKGVTSQSTGRRKAKAKAERSPMFPALSEAGSDDDLFQSVKPKPTKKANPFPLLEDEDDLFTDQKGKKNESKSNGQQDVTSKAQDIFEDDIFATEAIKPSQKIREKERTFDSNLFDDNIDIFADLTVKPKEKSKKKVEAKSIFDDDMDDIFSSGIQAKSTKPKSRSSQTVPEPRSEQKVSNIFDDPLNAFGGQ", "length": 1213, "header": "tr|F1SDV2-1|A0A5G2QJ50_PIG Computationally mapped isoform of FAM21/CAPZIP domain-containing protein OS=Sus scrofa OX=9823 GN=LOC100522401 PE=1 SV=5 CANONICAL=A0A5G2QJ50-1" }, "locus": { "chromosome": "14", "start_pos": 90640291, "end_pos": 90582633, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011385.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011385.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011090.5", "url": "https://www.ensembl.org/id/ENSSSCP00000011090.5" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 437, "start_aa": "Thr", "end_pos": 437, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr437", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QL44", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL44" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "early endosome", "id": "GO:0005769", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005769", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJ50", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ50" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJ50", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ50" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJ50", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ50" } ], "pmid": "" 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"database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE9/entry#names_and_taxonomy" } ] }, { "name": "Cep57-related protein", "type": "synonym", "evidence": [ { "id": "A0A5G2QJE9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE9/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Centrosomal protein which may be required for microtubule attachment to centrosomes.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJE9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE9#function" }, { "database": "UniProtKB", "id": "ARBA00059724", "url": "https://www.uniprot.org/uniprotkb/ARBA00059724#function" }, { "database": "UniProtKB", "id": "A0A5G2RGL0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RGL0#function" }, { "database": "UniProtKB", "id": "F1RT09", "url": "https://www.uniprot.org/uniprotkb/F1RT09#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], 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Classification" ] }, { "id": "IPR025913", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025913", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051756", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051756", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR19336", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19336", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR19336:SF10", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19336:SF10", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06657", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06657", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14073", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14073", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QJE9", "url": 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"MVGKSCIRSGKRDAVETSAPRCYLCFCSVRWAHAGWTQYPCIMDSELMHSIVGSYLNPPERVFVPSFTQSNESSQTHYSVNLEVTSPKMLRSPNNQALILALKTLQEKIYRLELERTQAEDNLNILSREAAQYKKALENETSERNLAHEELIKQKKDISMQLSSAQSRCTLLEKQLEYTKRMVLNVEREKDMILEQQAQLQREKEQDHMKLQAKLEKLDVLEKECFKLTTTQKTAEDKIKHLEEKLKEEEHQRKLFQDKASQLQTGLAINRILMASASNPKCSKEKKKSSKKTKCLKRGPPQQIYSKFGSLPVVAEKSASASHSVNASTQNLLQTMQHYGPHILQKPAKVIEPRYLYKPSRTTSQCKAVPSDSEKSISICDNLSELLMAMQDELDQMSIEYQELLSQMKETESQSVCEDIECELEHLVKKMEIKGERISKLMKHQDSVRKLQQKVQSSKMSEASAIQQEDSNLKGSKNIKNSPRKCTTNSLQKNSSFHPIRVHNLQMKLRRDDILWEQ", "length": 518, "header": "tr|A0A5G2QJE9-1|A0A5G2QJE9_PIG Isoform 1 of Centrosomal protein CEP57L1 OS=Sus scrofa OX=9823 GN=CEP57L1 PE=3 SV=2 CANONICAL=A0A5G2QJE9-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QJE9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE9/entry", "sequence": { "sequence": "MVGKSCIRSGKRDAVETSAPRCYLCFCSVRWAHAGWTQYPCIMDSELMHSIVGSYLNPPERVFVPSFTQSNESSQTHYSVNLEVTSPKMLRSPNNQALILALKTLQEKIYRLELERTQAEDNLNILSREAAQYKKALENETSERNLAHEELIKQKKDISMQLSSAQSRCTLLEKQLEYTKRMVLNVEREKDMILEQQAQLQREKEQDHMKLQAKLEKLDVLEKECFKLTTTQKTAEDKIKHLEEKLKEEEHQRKLFQDKASQLQTGLAINRILMASASNPKCSKEKKKSSKKTKCLKRGPPQQIYSKFGSLPVVAEKSASASHSVNASTQNLLQTMQHYGPHILQKPAKVIEPRYLYKPSRTTSQCKAVPSDSEKSISICDNLSELLMAMQDELDQMSIEYQELLSQMKETESQSVCEDIECELEHLVKKMEIKGERISKLMKHQDSVRKLQQKVQSSKMSEASAIQQEDSNLKGSKNIKNSPRKCTTNSLQKNSSFHPIRVHNLQMKLRRDDILWEQ", "length": 518, "header": "tr|A0A5G2QJE9-1|A0A5G2QJE9_PIG Isoform 1 of Centrosomal protein CEP57L1 OS=Sus scrofa OX=9823 GN=CEP57L1 PE=3 SV=2 CANONICAL=A0A5G2QJE9-1" }, "locus": { "chromosome": "1", "start_pos": 75226833, "end_pos": 75171260, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082257.2", "url": "https://www.ensembl.org/id/ENSSSCT00000082257.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064062.2", "url": "https://www.ensembl.org/id/ENSSSCP00000064062.2" } ] } }, { "isoform_ac": "A0A5G2RGL0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RGL0/entry", "sequence": { "sequence": "MVGKSCIRSGKRDAVETSAPRCYLCFCSVRWAHAGWTQYPCIMDSELMHSIVGSYLNPPERVFVPSFTQSNESSQTHYSVNLEVTSPKMLRSPNNQALILALKTLQEKIYRLELERTQAEDNLNILSREAAQYKKALENETSERNLAHEELIKQKKDISMQLSSAQSRCTLLEKQLEYTKRMVLNVEREKDMILEQQAQLQREKEQDHMKLQAKLEKLDVLEKECFKLTTTQKTAEDKIKHLEEKLKEEEHQRKLFQDKASQKTKCLKRGPPQQIYSKFGSLPVVAEKPSRTTSQCKAVPSDSEKSISICDNLSELLMAMQDELDQMSIEYQELLSQMKETESQSVCEDIECELEHLVKKMEIKGERISKLMKHQDSVRKLQQKVQSSKMSEASAIQQEDSNLKGSKNIKNSPRKCTTNSLQKNSSFHPIRVHNLQMKLRRDDILWEQ", "length": 448, "header": "tr|A0A5G2RGL0-1|A0A5G2QJE9_PIG Computationally mapped isoform of Centrosomal protein CEP57L1 OS=Sus scrofa OX=9823 GN=CEP57L1 PE=3 SV=2 CANONICAL=A0A5G2QJE9-1" }, "locus": { "chromosome": "1", "start_pos": 75226833, "end_pos": 75171260, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082801.2", "url": "https://www.ensembl.org/id/ENSSSCT00000082801.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070369.2", "url": "https://www.ensembl.org/id/ENSSSCP00000070369.2" } ] } }, { "isoform_ac": "F1RT09-1", "url": "https://www.uniprot.org/uniprotkb/F1RT09/entry", "sequence": { "sequence": "MVGKSCIRSGKRDAVETSAPRCYLCFCSVRWAHAGWTQYPCIMDSELMHSIVGSYLNPPERVFVPSFTQSNESSQTHYSVNLEVTSPKMLRSPNNQALILALKTLQEKIYRLELERTQAEDNLNILSREAAQYKKALENETSERNLAHEELIKQKKDISMQLSSAQSRCTLLEKQLEYTKRMVLNVEREKDMILEQQLQREKEQDHMKLQAKLEKLDVLEKECFKLTTTQKTAEDKIKHLEEKLKEEEHQRKLFQDKASQLQTGLAINRILMASASNPKCSKEKKKSSKKTKCLKRGPPQQIYSKFGSLPVVAEKSASASHSVNASTQNLLQTMQHYGPHILQKPAKVIEPRYLYKPSRTTSQCKAVPSDSEKSISICDNLSELLMAMQDELDQMSIEYQELLSQMKETESQSVCEDIECELEHLVKKMEIKGERISKLMKHQDSVRKLQQKVQSSKMSEASAIQQEDSNLKGSKNIKNSPRKCLLTNSLQKNSSFHPIRVHNLQMKLRRDDILWEQ", "length": 517, "header": "tr|F1RT09-1|A0A5G2QJE9_PIG Computationally mapped isoform of Centrosomal protein CEP57L1 OS=Sus scrofa OX=9823 GN=CEP57L1 PE=3 SV=3 CANONICAL=A0A5G2QJE9-1" }, "locus": { "chromosome": "1", "start_pos": 75226833, "end_pos": 75171260, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004854.5", "url": "https://www.ensembl.org/id/ENSSSCT00000004854.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004740.4", "url": "https://www.ensembl.org/id/ENSSSCP00000004740.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1RT09", "url": "https://www.uniprot.org/uniprotkb/F1RT09" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "centrosome", "id": "GO:0005813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005813", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJE9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE9" } ], "pmid": "" }, { "name": "microtubule", "id": "GO:0005874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005874", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJE9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJE9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE9" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJE9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE9" } ], "pmid": "" }, { "name": "gamma-tubulin binding", "id": "GO:0043015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043015", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJE9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJE9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 139, "end_pos": 141, "annotation": "n_glycosylation_sequon" }, { "start_pos": 326, "end_pos": 328, "annotation": "n_glycosylation_sequon" }, { "start_pos": 382, "end_pos": 384, "annotation": 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Bieri Philipp, Leitner Alexander, Schmitz Nikolaus, Aebersold Ruedi, Ban Nenad", "evidence": [ { "database": "UniProtKB", "id": "I3LNJ0", "url": "https://www.uniprot.org/uniprotkb/I3LNJ0" } ], "reference": [ { "type": "PubMed", "id": "25271403", "url": "https://glygen.org/publication/PubMed/25271403" } ] }, { "title": "Ribosome. The complete structure of the 55S mammalian mitochondrial ribosome.", "journal": "Science", "date": "2015", "authors": "Greber BJ, Bieri P, Leibundgut M, Leitner A, Aebersold R, Boehringer D, Ban N", "evidence": [ { "database": "UniProtKB", "id": "I3LNJ0", "url": "https://www.uniprot.org/uniprotkb/I3LNJ0" } ], "reference": [ { "type": "PubMed", "id": "25837512", "url": "https://glygen.org/publication/PubMed/25837512" } ] }, { "title": "Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM.", "journal": "Nature", "date": "2018", "authors": "Kummer Eva, Leibundgut Marc, Rackham Oliver, Lee Richard G, Boehringer Daniel, Filipovska Aleksandra, Ban Nenad", "evidence": [ { "database": "UniProtKB", "id": "I3LNJ0", "url": "https://www.uniprot.org/uniprotkb/I3LNJ0" } ], "reference": [ { "type": "PubMed", "id": "30089917", "url": "https://glygen.org/publication/PubMed/30089917" } ] }, { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LNJ0", "url": "https://www.uniprot.org/uniprotkb/I3LNJ0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] }, { "title": "Structural insights into mammalian mitochondrial translation elongation catalyzed by mtEFG1.", "journal": "EMBO J.", "date": "2020", "authors": "Kummer E, Ban N", "evidence": [ { "database": "UniProtKB", "id": "I3LNJ0", "url": "https://www.uniprot.org/uniprotkb/I3LNJ0" } ], "reference": [ { "type": "PubMed", "id": "32602580", "url": "https://glygen.org/publication/PubMed/32602580" } ] }, { "title": "Structural basis of translation termination, rescue, and recycling in mammalian mitochondria.", "journal": "Mol. 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"UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QK35" }, { "id": "PS51465", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51465" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Kazal-like", "eco_id": "ECO_0000259", "start_pos": 111, "end_pos": 158, "start_aa": "Cys", "end_aa": "Gln", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A5G2QK35", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QK35" }, { "id": "PS50106", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50106" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PDZ", "eco_id": "ECO_0000259", "start_pos": 351, "end_pos": 440, "start_aa": "Thr", "end_aa": "Lys", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 314, "end_pos": 316 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QK37-1", "uniprot_ac": "A0A5G2QK37", "uniprot_id": "A0A5G2QK37_PIG", "mass": { "chemical_mass": 47414.0, "monoisotopic_mass": 47414.0 }, "refseq": {}, "gene_names": [ { "name": "GPR83", "type": "recommended", "evidence": [ { "id": "A0A5G2QK37", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QK37" } ] } ], "protein_names": [ { "name": "G-protein coupled receptor 83", "type": "recommended", "evidence": [ { "id": "A0A5G2QK37", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QK37/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "G-protein coupled receptor for PEN, a neuropeptide produced from the precursor protein, proSAAS (encoded by PCSK1N). Acts through a G(i)- and G(q)-alpha-mediated pathway in response to PEN. Plays a role in food intake and body weight regulation. May contribute to the regulation of anxiety-related behaviors.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QK37", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QK37#function" }, { "database": "UniProtKB", "id": "ARBA00094531", "url": "https://www.uniprot.org/uniprotkb/ARBA00094531#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QK37", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QK37" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GPR83", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QK37", "locus": { "chromosome": "9", "start_pos": 26548594, "end_pos": 26560473, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000022490", "url": "https://www.ensembl.org/id/ENSSSCG00000022490" } ] } } ], "crossref": [ { "id": "A0A5G2QK37", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QK37", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000022490", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000022490", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd15389", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd15389", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000276", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000276", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000611", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000611", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IYISVIW", "url": "https://omabrowser.org/oma/group/IYISVIW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR24238", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24238", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24238:SF57", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24238:SF57", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00001", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00001", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QK37", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QK37", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QK37-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QK37-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LAZ1", "url": "https://www.uniprot.org/uniprotkb/I3LAZ1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LAZ1-1", "url": "https://www.uniprot.org/uniprotkb/I3LAZ1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGRPWLLLCLLPVVRAADEQSPEAALGPNASHFFSWNNYTFSDWQNFVGRRRYGAESQNPTVKALLIVAYSFIIVFSLFGNVLVCHVIFKNQRMHSATSLFIVNLAVADLMITLLNTPFTLVRFVNSTWVFGKGMCHVSRFAQYCSLHVSALTLTAIAVDRHQVIMHPLKPRISITKGVIYIAVIWTMATFFSLPHAICQKLFTFKYSEDTVRSLCLPDFPEPADLFWKYLDLATFILLYILPLLIISVAYARVAKKLWLCNTIGDVTTEQYLALRRKKKKTIKMLMLVVVLFALCWFPLNCYVLLLSSKVIRTNNALYFAFHWFAMSSTCYNPFIYCWLNENFRVELKALLSMCQRPPKPPEERPPSPVPSFRMAWTEKSSERRAPLANHLPPSSQLQSGKTDLSSVEPIVAMT", "length": 415, "header": "tr|A0A5G2QK37-1|A0A5G2QK37_PIG Isoform 1 of G-protein coupled receptor 83 OS=Sus scrofa OX=9823 GN=GPR83 PE=3 SV=1 CANONICAL=A0A5G2QK37-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QK37-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QK37/entry", "sequence": { "sequence": "MGRPWLLLCLLPVVRAADEQSPEAALGPNASHFFSWNNYTFSDWQNFVGRRRYGAESQNPTVKALLIVAYSFIIVFSLFGNVLVCHVIFKNQRMHSATSLFIVNLAVADLMITLLNTPFTLVRFVNSTWVFGKGMCHVSRFAQYCSLHVSALTLTAIAVDRHQVIMHPLKPRISITKGVIYIAVIWTMATFFSLPHAICQKLFTFKYSEDTVRSLCLPDFPEPADLFWKYLDLATFILLYILPLLIISVAYARVAKKLWLCNTIGDVTTEQYLALRRKKKKTIKMLMLVVVLFALCWFPLNCYVLLLSSKVIRTNNALYFAFHWFAMSSTCYNPFIYCWLNENFRVELKALLSMCQRPPKPPEERPPSPVPSFRMAWTEKSSERRAPLANHLPPSSQLQSGKTDLSSVEPIVAMT", "length": 415, "header": "tr|A0A5G2QK37-1|A0A5G2QK37_PIG Isoform 1 of G-protein coupled receptor 83 OS=Sus scrofa OX=9823 GN=GPR83 PE=3 SV=1 CANONICAL=A0A5G2QK37-1" }, "locus": { "chromosome": "9", "start_pos": 26560449, "end_pos": 26549290, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069230.1", "url": "https://www.ensembl.org/id/ENSSSCT00000069230.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062422.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062422.1" } ] } }, { "isoform_ac": "I3LAZ1-1", "url": "https://www.uniprot.org/uniprotkb/I3LAZ1/entry", "sequence": { "sequence": "MGRPWLLLCLLPVVRAADEQSPEAALGPNASHFFSWNNYTFSDWQNFVGRRRYGAESQNPTVKALLIVAYSFIIVFSLFGNVLVCHVIFKNQRMHSATSLFIVNLAVADLMITLLNTPFTLVIMHPLKPRISITKGVIYIAVIWTMATFFSLPHAICQKLFTFKYSEDTVRSLCLPDFPEPADLFWKYLDLATFILLYILPLLIISVAYARVAKKLWLCNTIGDVTTEQYLALRRKKKKTIKMLMLVVVLFALCWFPLNCYVLLLSSKVIRTNNALYFAFHWFAMSSTCYNPFIYCWLNENFRVELKALLSMCQRPPKPPEERPPSPVPSFRMAWTEKSSERRAPLANHLPPSSQLQSGKTDLSSVEPIVAMT", "length": 373, "header": "tr|I3LAZ1-1|A0A5G2QK37_PIG Computationally mapped isoform of G-protein coupled receptor 83 OS=Sus scrofa OX=9823 GN=GPR83 PE=3 SV=3 CANONICAL=A0A5G2QK37-1" }, "locus": { "chromosome": "9", "start_pos": 26560449, "end_pos": 26549290, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029658.3", "url": "https://www.ensembl.org/id/ENSSSCT00000029658.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021209.3", "url": "https://www.ensembl.org/id/ENSSSCP00000021209.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LAZ1", "url": "https://www.uniprot.org/uniprotkb/I3LAZ1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "F1MX56-1", "protein_name": "G-protein coupled receptor 83", "gene_name": "GPR83", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTPGWVLLCLLPAVRAADERSPGAALAGPNASHFFWNNYTFSDWQNFVGRRRYGAESQNPTVKALLIVAYSFIIIFSLFGNVLVCHVIFKNQRMHSATSLFIVNLAVADIMITLLNTPFTLVRFVNSTWVFGKGMCHISRFAQYCSLHVSALTLTAIAVDRHQVIMHPLKPRISITKGVIYIAVIWTMATFFSLPHAICQKLFTFKYSEDVVRSLCLPDFPEPADLFWKYLDLATFILLYILPLLIISVAYARVAKKLWLCNTIGDVTTKQYLALRRKKKKTIKMLMLVVVLFALCWFPLNCYVLLLSSKVIRTNNALYFAFHWFAMSSTCYNPFIYCWLNENFRVELKALLHMCQRSPKPQEGQPPSPVPSLRVAWAEKSSGRRASPANSLLPSSQVQSGRTDLASVEPIVTMT", "length": 415 }, "evidence": [ { "id": "A0A5G2QK37", "url": "https://omabrowser.org/oma/group/A0A5G2QK37/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P30731-1", "protein_name": "G protein-coupled receptor 83", "gene_name": "Gpr83", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKVPPVLLLFLLSSVRATEQPQVVTEHPSMEAALTGPNASSHFWANYTFSDWQNFVGRRRYGAESQNPTVKALLIVAYSFTIVFSLFGNVLVCHVIFKNQRMHSATSLFIVNLAVADIMITLLNTPFTLVRFVNSTWVFGKGMCHVSRFAQYCSLHVSALTLTAIAVDRHQVIMHPLKPRISITKGVIYIAVIWVMATFFSLPHAICQKLFTFKYSEDIVRSLCLPDFPEPADLFWKYLDLATFILLYLLPLFIISVAYARVAKKLWLCNTIGDVTTEQYLALRRKKKTTVKMLVLVVVLFALCWFPLNCYVLLLSSKAIHTNNALYFAFHWFAMSSTCYNPFIYCWLNENFRVELKALLSMCQRPPKPQEDRLPSPVPSFRVAWTEKSHGRRAPLPNHHLPSSQIQSGKTDLSSVEPVVAMS", "length": 423 }, "evidence": [ { "id": "A0A5G2QK37", "url": "https://omabrowser.org/oma/group/A0A5G2QK37/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VHD7-1", "protein_name": "G protein-coupled receptor 83", "gene_name": "Gpr83", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNVPPVLLLFLLSSVRATEQPQVVTEHPSMDAALTGANASHFWANYTFSDWQNFVGRRRYGAESQNPTVKALLIVAYSFIIVFSLFGNVLVCHVIFKNQRMHSATSLFIVNLAVADIMITLLNTPFTLVRFVNSTWVFGKGMCHVSRFAQYCSLHVSALTLTAIAVDRHQVIMHPLKPRISITKGVIYIAVIWVMATFFSLPHAICQKLFTFKYSEDIVRSLCLPDFPEPADLFWKYLDLATFILLYLLPLFIISVAYARVAKKLWLCNTIGDVTTEQYLALRRKKKTTVKMLVLVVVLFALCWFPLNCYVLLLSSKAIHTNNALYFAFHWFAMSSTCYNPFIYCWLNENFRVELKALLSMCQRPSKPQEDRLPSPVPSFRVAWTEKSHGRRALLANHHLPSSQIQSGKTDLSSVEPTVAVS", "length": 422 }, "evidence": [ { "id": "A0A5G2QK37", "url": "https://omabrowser.org/oma/group/A0A5G2QK37/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9NYM4-1", "protein_name": "G protein-coupled receptor 83", "gene_name": "GPR83", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"https://www.ensembl.org/id/ENSSSCG00000017543" } ] } } ], "crossref": [ { "id": "A0A5G2QKC1", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QKC1", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000017543", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000017543", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd21968", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd21968", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR041611", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041611", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041641", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041641", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051002", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051002", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR31915", "url": 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] }, { "id": "F1RWF7", "url": "https://www.uniprot.org/uniprotkb/F1RWF7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RWF7-1", "url": "https://www.uniprot.org/uniprotkb/F1RWF7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEETIGEPPTSAVLLDHCHFSQVIFNSVEKFYVPGGDVTCYYTLTQHFIPRRKDWIGIFRVGWKTTREYYTFMWVTLPTDLNSEAAKQQEVQFKAYYLPKDDEYYQFCYVDQDGVVRGASIPFQFRPENEEDILVVTTQGEVEEIEQHNKELRKENKELKDSCVSLQKQNSDLQAELQKKQEELETLKSISKKLEETMKEQKDSWKTELLQLKEQSQKMSSENERMGVRVDQLQAQLSTQEKEMEKLVQRVQEKTEQVEQLKKENGQLFLNLTEQRAHQKTLEQTVEEMKQQRTTAAKKQQELTEPKNKKIAVEEQLVQEVERLKAKVEAGKACFLEKYKECQRLHKQIRQLRAAARDQNFDLSKKLSENKIIYSTLQKEKERMEKENDLLKRENSRLLSYMGLDHDSLPYQAPTSNPGGARRSPGLVYGNPYSGIQESSAPSLLSIKKCPTCKSDFGDDIFNHTLEQDVQSPSLNCPICDKYFPAKEKQIFEDHVFCHTL", "length": 501, "header": "tr|A0A5G2QKC1-1|A0A5G2QKC1_PIG Isoform 1 of Calcium-binding and coiled-coil domain-containing protein 2 OS=Sus scrofa OX=9823 GN=CALCOCO2 PE=3 SV=2 CANONICAL=A0A5G2QKC1-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QKC1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKC1/entry", "sequence": { "sequence": "MEETIGEPPTSAVLLDHCHFSQVIFNSVEKFYVPGGDVTCYYTLTQHFIPRRKDWIGIFRVGWKTTREYYTFMWVTLPTDLNSEAAKQQEVQFKAYYLPKDDEYYQFCYVDQDGVVRGASIPFQFRPENEEDILVVTTQGEVEEIEQHNKELRKENKELKDSCVSLQKQNSDLQAELQKKQEELETLKSISKKLEETMKEQKDSWKTELLQLKEQSQKMSSENERMGVRVDQLQAQLSTQEKEMEKLVQRVQEKTEQVEQLKKENGQLFLNLTEQRAHQKTLEQTVEEMKQQRTTAAKKQQELTEPKNKKIAVEEQLVQEVERLKAKVEAGKACFLEKYKECQRLHKQIRQLRAAARDQNFDLSKKLSENKIIYSTLQKEKERMEKENDLLKRENSRLLSYMGLDHDSLPYQAPTSNPGGARRSPGLVYGNPYSGIQESSAPSLLSIKKCPTCKSDFGDDIFNHTLEQDVQSPSLNCPICDKYFPAKEKQIFEDHVFCHTL", "length": 501, "header": "tr|A0A5G2QKC1-1|A0A5G2QKC1_PIG Isoform 1 of Calcium-binding and coiled-coil domain-containing protein 2 OS=Sus scrofa OX=9823 GN=CALCOCO2 PE=3 SV=2 CANONICAL=A0A5G2QKC1-1" }, "locus": { "chromosome": "12", "start_pos": 25079327, "end_pos": 25058753, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": 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{ "chromosome": "12", "start_pos": 25088050, "end_pos": 25058753, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080801.2", "url": "https://www.ensembl.org/id/ENSSSCT00000080801.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067388.2", "url": "https://www.ensembl.org/id/ENSSSCP00000067388.2" } ] } }, { "isoform_ac": "F1RWF7-1", "url": "https://www.uniprot.org/uniprotkb/F1RWF7/entry", "sequence": { "sequence": "MEETIGEPPTSAVLLDHCHFSQVIFNSVEKFYVPGGDVTCYYTLTQHFIPRRKDWIGIFRVGWKTTREYYTFMWVTLPTDLNSEAAKQQEVQFKASIPFQFRPENEEDILVVTTQGEVEEIEQHNKELRKENKELKDSCVSLQKQNSDLQAELQKKQEELETLKSISKKLEETMKEQKDSWKTELLQLKEQSQKMSSENERMGVRVDQLQAQLSTQEKEMEKLVQRVQEKTEQVEQLKKENGQLFLNLTEQRAHQKTLEQTVEEMKQQRTTAAKKQQELTDQNFDLSKKLSENKIIYSTLQKEKERMEKENDLLKRENSRLLSYMGLDHDSLPYQAPTSNPGGARRSPGLVYGNPYSGIQESSAPSLLSIKKCPTCKSDFGDDIFNHTLEQDVQSPSLNCPICDKYFPAKEKQIFEDHVFCHTL", "length": 424, "header": "tr|F1RWF7-1|A0A5G2QKC1_PIG Computationally mapped isoform of Calcium-binding and coiled-coil domain-containing protein 2 OS=Sus scrofa OX=9823 GN=CALCOCO2 PE=3 SV=3 CANONICAL=A0A5G2QKC1-1" }, "locus": { "chromosome": "12", "start_pos": 25079327, "end_pos": 25058753, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000019097.5", "url": "https://www.ensembl.org/id/ENSSSCT00000019097.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000018591.4", "url": "https://www.ensembl.org/id/ENSSSCP00000018591.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 10, "start_aa": "Thr", "end_pos": 10, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr10", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1RWF7", "url": "https://www.uniprot.org/uniprotkb/F1RWF7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 7, "go_terms": [ { "name": "autophagosome membrane", "id": "GO:0000421", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000421", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKC1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKC1" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKC1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKC1" } ], "pmid": "" }, { "name": "cytoskeleton", "id": "GO:0005856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005856", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKC1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKC1" } ], "pmid": "" }, { "name": "perinuclear region of cytoplasm", "id": "GO:0048471", 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} ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKC9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKC9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PPA1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKC9", "locus": { "chromosome": "14", "start_pos": 73132375, "end_pos": 73167689, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000010261", "url": "https://www.ensembl.org/id/ENSSSCG00000010261" } ] } } ], "crossref": [ { "id": "A0A5G2QKC9", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QKC9", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000010261", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000010261", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00412", 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"MSSFSSEERSAPFTLEYRVFLKNEKGQYISPFHDIPIYADKDVFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGHSDKHTGCCGDNDPIDVCEIGSKVCARGEIIRVKVLGILAMIDEGETDWKVIAINVDDPDAANYNDINDVKRLKPGYLEATVDWFRRYKVPDGKPENQFAFNAEFKDKDFAVDIIKSTHDYWRALVTKKTDGKGISCYHHHVNLPAQYQQMWISGSITRKTKILLWNTS", "length": 274, "header": "tr|A0A5G2QTT3-1|A0A5G2QKC9_PIG Computationally mapped isoform of inorganic diphosphatase OS=Sus scrofa OX=9823 GN=PPA1 PE=1 SV=1 CANONICAL=A0A5G2QKC9-1" }, "locus": { "chromosome": "14", "start_pos": 73167577, "end_pos": 73132660, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080661.2", "url": "https://www.ensembl.org/id/ENSSSCT00000080661.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068253.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068253.1" } ] } }, { "isoform_ac": "A0A5G2QU23-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QU23/entry", "sequence": { "sequence": "MSSFSSEERSAPFTLEYRVFLKNEKGQYISPFHDIPIYADKDVFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGHSDKHTGCCGDNDPIDVCEIGSKVCARGEIIRVKVLGILAMIDEGETDWKVIAINVDDPDAANYNVCRWGMVL", "length": 178, "header": "tr|A0A5G2QU23-1|A0A5G2QKC9_PIG Computationally mapped isoform of inorganic diphosphatase OS=Sus scrofa OX=9823 GN=PPA1 PE=1 SV=1 CANONICAL=A0A5G2QKC9-1" }, "locus": { "chromosome": "14", "start_pos": 73167577, "end_pos": 73140500, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079159.1", "url": "https://www.ensembl.org/id/ENSSSCT00000079159.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065495.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065495.1" } ] } }, { "isoform_ac": "A0A8W4F654-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F654/entry", "sequence": { "sequence": "MSSFSSEERSAPFTLEYRVFLKNEKGQYISPFHDIPIYADKIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGHSDKHTGCCGDNDPIDVCEIGSKVCARGEIIRVKVLGILAMIDEGETDWKVIAINVDDPDAANYNDINDVKRLKPGYLEATVDWFRRYKVPDGKPENQFAFNAEFKDKDFAVDIIKSTHDYWRALVTKKTDGKGISCMNTTVSESPFQCDPDAAKAIVDALPPPCESACTIPTDVDKWFHHQKN", "length": 271, "header": "tr|A0A8W4F654-1|A0A5G2QKC9_PIG Computationally mapped isoform of inorganic diphosphatase OS=Sus scrofa OX=9823 GN=PPA1 PE=1 SV=1 CANONICAL=A0A5G2QKC9-1" }, "locus": { "chromosome": "14", "start_pos": 73167577, "end_pos": 73132685, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000106509.1", "url": "https://www.ensembl.org/id/ENSSSCT00000106509.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074626.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074626.1" } ] } }, { "isoform_ac": "F1SUE3-1", "url": "https://www.uniprot.org/uniprotkb/F1SUE3/entry", "sequence": { "sequence": "MSSFSSEERSAPFTLEYRVFLKNEKGQYISPFHDIPIYADKDVFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGHSDKHTGCCGDNDPIDVCEIGSKVCARGEIIRVKVLGILAMIDEGETDWKVIAINVDDPDAANYNDINDVKRLKPGYLEATVDWFRRYKVPDGKPENQFAFNAEFKDKVIMNTTVSESPFQCDPDAAKAIVDALPPPCESACTIPTDGKIYIVVKLH", "length": 262, "header": "tr|F1SUE3-1|F1SUE3_PIG Computationally mapped isoform of inorganic diphosphatase OS=Sus scrofa OX=9823 GN=PPA1 PE=1 SV=4 CANONICAL=A0A5G2QKC9-1" }, "locus": { "chromosome": "14", "start_pos": 73167577, "end_pos": 73133479, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011231.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011231.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000010939.4", "url": "https://www.ensembl.org/id/ENSSSCP00000010939.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4F654", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F654" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100155201", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100155201", "resource": "KEGG Pathway" }, { "id": "R-SSC-379716", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-379716", "resource": "Reactome", "description": "Cytosolic tRNA aminoacylation" }, { "id": "R-SSC-71737", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-71737", "resource": "Reactome", "description": "Pyrophosphate hydrolysis" } ], "orthologs": [ { "uniprot_canonical_ac": "P37980-1", "protein_name": "Inorganic pyrophosphatase", "gene_name": "PPA1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSGFSSEERAAPFTLEYRVFLKNEKGQYISPFHDIPIYADKEVFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGHNDKHTGCCGDNDPIDVCEIGSKVCARGEIIRVKVLGILAMIDEGETDWKVIAINVEDPDAANYNDINDVKRLKPGYLEATVDWFRRYKVPDGKPENEFAFNAEFKDKNFAIDIIESTHDYWRALVTKKTDGKGISCMNTTVSESPFQCDPDAAKAIVDALPPPCESACTIPTDVDKWFHHQKN", "length": 289 }, "evidence": [ { "id": "A0A5G2QKC9", "url": "https://omabrowser.org/oma/group/A0A5G2QKC9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q15181-1", "protein_name": "Inorganic pyrophosphatase", "gene_name": "PPA1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSGFSTEERAAPFSLEYRVFLKNEKGQYISPFHDIPIYADKDVFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGHNDKHTGCCGDNDPIDVCEIGSKVCARGEIIGVKVLGILAMIDEGETDWKVIAINVDDPDAANYNDINDVKRLKPGYLEATVDWFRRYKVPDGKPENEFAFNAEFKDKDFAIDIIKSTHDHWKALVTKKTNGKGISCMNTTLSESPFKCDPDAARAIVDALPPPCESACTVPTDVDKWFHHQKN", "length": 289 }, "evidence": [ { "id": "A0A5G2QKC9", "url": "https://omabrowser.org/oma/group/A0A5G2QKC9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q54PV8-1", "protein_name": "Inorganic pyrophosphatase", "gene_name": "ppa1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKNFFSFSKLTPHLKNIYHRNMTYTTKQVGETGSLEYRLFFLKDNKPVSSFHDVPLWVNKEKQIVNMLVEIPRGTNAKLEIATKEYMNPIKQDVKDGKLRFVHDKYPFNYGALPQTWESPEHTHPSTGAKGDNDPLDACEIGSGQGVTGEFKQVKVLGVFAMIDAGETDWKILCIDVNDPIASQINSQEDIEKHLPGKINEVYTFLRDYKIPDGKGPNQFAFDGKLQSIDFSMKIIEETEAEWKDLVGGKTKSSLSVVNTTLNDSNTVTADVAAQKLNF", "length": 279 }, "evidence": [ { "id": "A0A5G2QKC9", "url": "https://omabrowser.org/oma/group/A0A5G2QKC9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9D819-1", "protein_name": "Inorganic pyrophosphatase", "gene_name": "Ppa1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGFSSEERAAPFTLEYRVFLKNEKGQYISPFHDVPIYADKDVFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGHSDKHTGCCGDNDPIDVCEIGSKVCARGEIIRVKVLGILAMIDEGETDWKVIAINVDDPDAANYKDISDVERLKPGYLEATVDWFRRYKVPDGKPENEFAFNAEFKNKDFAVDIIKSTHDYWKALVTKKTDGKGISCMNTTVSESPFKCDPDAAKAIVDALPPPCESACSLPTDVDKWFHQQKN", "length": 289 }, "evidence": [ { "id": "A0A5G2QKC9", "url": "https://omabrowser.org/oma/group/A0A5G2QKC9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "magnesium ion binding", "id": "GO:0000287", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000287", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKC9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKC9" } ], "pmid": "" }, { "name": "inorganic diphosphate phosphatase activity", "id": "GO:0004427", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004427", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKC9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKC9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKC9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKC9" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKC9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKC9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "phosphate-containing compound metabolic process", "id": "GO:0006796", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006796", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKC9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKC9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 244, "end_pos": 246, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-71732", "name": "PPA1 hydrolyzes pyrophosphate to orthophosphate", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-71732", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-71732" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QKC9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 289, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QKC9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QKC9" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 244, "end_pos": 246 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QKE0-1", "uniprot_ac": "A0A5G2QKE0", "uniprot_id": "A0A5G2QKE0_PIG", "mass": { "chemical_mass": 16183.0, "monoisotopic_mass": 16183.0 }, "refseq": {}, "gene_names": [ { "name": "IFITM1", "type": "recommended", "evidence": [ { "id": "A0A5G2QKE0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKE0" } ] } ], "protein_names": [ { "name": "Interferon induced transmembrane protein 1", "type": "synonym", "evidence": [ { "id": "A0A5G2QKE0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKE0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKE0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKE0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "IFITM1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKE0", "locus": {} } ], "crossref": [ { "id": "A0A5G2QKE0", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QKE0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000014565", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000014565", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR007593", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007593", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051517", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051517", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR13999", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13999", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13999:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13999:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04505", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04505", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-198933", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-198933", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QKE0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKE0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QKE0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKE0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7GSV9", "url": 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OX=9823 GN=IFITM1 PE=1 SV=2 CANONICAL=A0A5G2QKE0-1" }, "locus": { "chromosome": "2", "start_pos": 125360, "end_pos": 124119, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088127.2", "url": "https://www.ensembl.org/id/ENSSSCT00000088127.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064988.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064988.1" } ] } }, { "isoform_ac": "K7GSV9-1", "url": "https://www.uniprot.org/uniprotkb/K7GSV9/entry", "sequence": { "sequence": "TAAPSLHQETLLKASPLPLTLEMIKSQHEMDGLGAPQTSAPVATTVITIPRETSVPDHIVWSLFNTLFLNWCCLGFVAFAYSVKARDRKMVGDIIGAQSYASTAKCLNIWALILGLILTIGATVLLVFVYITAYHMLERAKSNRGY", "length": 146, "header": "tr|K7GSV9-1|A0A5G2QKE0_PIG Computationally mapped isoform of Interferon induced transmembrane protein 1 OS=Sus scrofa OX=9823 GN=IFITM1 PE=1 SV=2 CANONICAL=A0A5G2QKE0-1" }, "locus": { "chromosome": "2", "start_pos": 125360, "end_pos": 124302, "strand": "-", "evidence": [ { "database": "Ensembl 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"categories": [ "Protein" ] }, { "id": "F1RUZ4", "url": "https://www.uniprot.org/uniprotkb/F1RUZ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RUZ4-1", "url": "https://www.uniprot.org/uniprotkb/F1RUZ4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MATEQRGEQHGAPQQPPGGVEASGRGAEGLPLTRRRSSKKKGLRGSRKDSGSSGEQPPPQGPEAPESSKNPSRTREGQEGPGPVAPALASRRQSHRHRPASQHDAAQRTYGPLLNRIFGKDRELGPEELDELRAAFEEFDTDHDGHIGYRELGECMRTLGYMPTEMELIEVSQHVKMRMGGRVDFEEFVEMMGPKLREETAHMLGVRELRIAFREFDRDRDGRITVAELRQAAPALLGEPLAGSELDEMLREVDLNGDGTVDFDGEFPILPATPPHSSGSQAEPSASGAAGGGVSLTWTCPSPAPSLPQSL", "length": 311, "header": "tr|A0A5G2QL39-1|A0A5G2QL39_PIG Isoform 1 of Calcium-binding protein 4 OS=Sus scrofa OX=9823 GN=CABP4 PE=1 SV=1 CANONICAL=A0A5G2QL39-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QL39-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QL39/entry", "sequence": { "sequence": 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genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1RUZ4", "url": "https://www.uniprot.org/uniprotkb/F1RUZ4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Z718-1", "protein_name": "Calcium binding protein 4", "gene_name": "CABP4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": 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"https://www.ebi.ac.uk/interpro/entry/IPR001179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046357", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046357", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056598", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056598", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR44927", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44927", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44927:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44927:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00254", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00254", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23649", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23649", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "16237", "url": "https://www.rhea-db.org/rhea/16237", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QLL8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLL8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QLL8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLL8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5URD0", "url": "https://www.uniprot.org/uniprotkb/A0ABB5URD0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5URD0-1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5URD0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LVI2", "url": "https://www.uniprot.org/uniprotkb/I3LVI2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LVI2-1", "url": "https://www.uniprot.org/uniprotkb/I3LVI2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFGASDEDDTDFLSPSGGARLASLFGPDQAVAGHGNEFFQYTAPKQPKKGQGTVSTGNQVTPKTAPTTTGTSTVLVAIAVHAYRYTNGQYVKQGKFGAAVLGNHTAREYRILLYISQQQPVTVARIHLNFELMVRPNNYSTFYDDQRQNWSIMFESEKAAVEFNKQVCIAKCNSTSSLDSVLSQDLVVTEGPAVEVGDSLEVAYTSWVFQNHTLGQVLDSTANKDKLLRLKLGSGKVIKGWEDGMVGMKKGAKRLLFIPPACAAGSEGVIGWSHSTDSILVFEVEIRRVKFARDAGSDGHSVSSRDSAAPSPVPGVDNISADPVVSPSTSVPFKSGESALRSKSNSLSEQLTMNTNPDTVKAKLISRMAKMGQPMLPILPPQLDSNDSEIEDVNALRGAGQPLGTLPIQPSLQPAHPALPQMTSQAPQPSVSGLQTPSAALMQVASLDSHSAVSGNAQSFQPYAGMQAYAYPQAPAVTSQLQPVRPLYPAPLSQSPHFQGSGDVASFLMTEARQHNTEIRMAVSKVADKMDHLMTKVEELQKHSAGNSLLLPGMSVTMETSMIMSNIQRIIQENERLKQEILEKSSRIEEQNDKISELIERNQRYVEQSNLMMEKRNTSLQTATENTQARVLHAEQEKAKVTEELAAATAQVSHLQLKVAAHQKKETELQMQLTESMKDTDLLRSQLAKVQAELSELQETSEQAQSKFKSEKQSRRQLELRVTSLEEELTDLRAEKESLEKNLSERKKKSAQERCQAEEEIDEIRKSHQEELDKLRQLLKKARVSTDQAAAEQLSLVQAELQSQWEAKCEHLLASAKDEHLQQYQEVCAQRDASQQKLLQLEAKCSALQAQVTALKEQNAQHLKDLENKPQVSGVEAATADPSEKVKKIMNQVFHCLRGEFELEESYNGRTILGAIMSTIKMVTLELLDQHEREKGESSNEEEEEEERPRSPAQEPSISVSARQSQAPSHREKQEPPVPTEQVVQEAAALPPQALPTPQDDVQGRDGEPSEAEALSEIKEDASPPEPACLASHRALRPPTSIPPPPGPVTVDSECEEALAPSSLGGAFVGEQESSRRLSLTLDSKKGDPLALGPESPEGEPRAPELKNEEGVTSTPAPSQEPCSPEAASSAVGATAGSSHCSQQPSLCEDEDDELFKGATLKVASPKAQAEEEDDDEVSMKGRPPPTPLFGDDDDDDDIDWLA", "length": 1203, "header": "tr|A0A5G2QLL8-1|A0A5G2QLL8_PIG Isoform 1 of peptidylprolyl isomerase OS=Sus scrofa OX=9823 GN=FKBP15 PE=1 SV=3 CANONICAL=A0A5G2QLL8-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QLL8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLL8/entry", "sequence": { "sequence": "MFGASDEDDTDFLSPSGGARLASLFGPDQAVAGHGNEFFQYTAPKQPKKGQGTVSTGNQVTPKTAPTTTGTSTVLVAIAVHAYRYTNGQYVKQGKFGAAVLGNHTAREYRILLYISQQQPVTVARIHLNFELMVRPNNYSTFYDDQRQNWSIMFESEKAAVEFNKQVCIAKCNSTSSLDSVLSQDLVVTEGPAVEVGDSLEVAYTSWVFQNHTLGQVLDSTANKDKLLRLKLGSGKVIKGWEDGMVGMKKGAKRLLFIPPACAAGSEGVIGWSHSTDSILVFEVEIRRVKFARDAGSDGHSVSSRDSAAPSPVPGVDNISADPVVSPSTSVPFKSGESALRSKSNSLSEQLTMNTNPDTVKAKLISRMAKMGQPMLPILPPQLDSNDSEIEDVNALRGAGQPLGTLPIQPSLQPAHPALPQMTSQAPQPSVSGLQTPSAALMQVASLDSHSAVSGNAQSFQPYAGMQAYAYPQAPAVTSQLQPVRPLYPAPLSQSPHFQGSGDVASFLMTEARQHNTEIRMAVSKVADKMDHLMTKVEELQKHSAGNSLLLPGMSVTMETSMIMSNIQRIIQENERLKQEILEKSSRIEEQNDKISELIERNQRYVEQSNLMMEKRNTSLQTATENTQARVLHAEQEKAKVTEELAAATAQVSHLQLKVAAHQKKETELQMQLTESMKDTDLLRSQLAKVQAELSELQETSEQAQSKFKSEKQSRRQLELRVTSLEEELTDLRAEKESLEKNLSERKKKSAQERCQAEEEIDEIRKSHQEELDKLRQLLKKARVSTDQAAAEQLSLVQAELQSQWEAKCEHLLASAKDEHLQQYQEVCAQRDASQQKLLQLEAKCSALQAQVTALKEQNAQHLKDLENKPQVSGVEAATADPSEKVKKIMNQVFHCLRGEFELEESYNGRTILGAIMSTIKMVTLELLDQHEREKGESSNEEEEEEERPRSPAQEPSISVSARQSQAPSHREKQEPPVPTEQVVQEAAALPPQALPTPQDDVQGRDGEPSEAEALSEIKEDASPPEPACLASHRALRPPTSIPPPPGPVTVDSECEEALAPSSLGGAFVGEQESSRRLSLTLDSKKGDPLALGPESPEGEPRAPELKNEEGVTSTPAPSQEPCSPEAASSAVGATAGSSHCSQQPSLCEDEDDELFKGATLKVASPKAQAEEEDDDEVSMKGRPPPTPLFGDDDDDDDIDWLA", "length": 1203, "header": "tr|A0A5G2QLL8-1|A0A5G2QLL8_PIG Isoform 1 of peptidylprolyl isomerase OS=Sus scrofa OX=9823 GN=FKBP15 PE=1 SV=3 CANONICAL=A0A5G2QLL8-1" }, "locus": { "chromosome": "1", "start_pos": 253868033, "end_pos": 253808349, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107203.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107203.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000081597.1", "url": "https://www.ensembl.org/id/ENSSSCP00000081597.1" } ] } }, { "isoform_ac": "A0ABB5URD0-1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5URD0/entry", "sequence": { "sequence": "MFGASDEDDTDFLSPSGGARLASLFGPDQAVAGHGNEFFQYTAPKQPKKGQGTVSTGNQVTPKTAPTTTGTSTVLVAIAVHAYRYTNGQYVKQGKFGAAVLGNHTAREYRILLYISQQQPVTVARIHLNFELMVRPNNYSTFYDDQRQNWSIMFESEKAAVEFNKQVCIAKCNSTSSLDSVLSQDLVVTEGPAVEVGDSLEVAYTSWVFQNHTLGQVLDSTANKDKLLRLKLGSGKVIKGWEDGMVGMKKGAKRLLFIPPACAAGSEGVIGWSHSTDSILVFEVEIRRVKFARDAGSDGHSVSSRDSAAPSPVPGVDNISADPVVSPSTSVPFKSGESALRSKSNSLSEQLTMNTNPDTVKAKLISRMAKMGQPMLPILPPQLDSNDSEIEDVNALRGAGQPLGTLPIQPSLQPAHPALPQMTSQAPQPSVSGLQTPSAALMQVASLDSHSAVSGNAQSFQPYAGMQAYAYPQAPAVTSQLQPVRPLYPAPLSQSPHFQGSGDVASFLMTEARQHNTEIRMAVSKVADKMDHLMTKVEELQKHSAGNSLLLPGMSVTMETSMIMSNIQRIIQENERLKQEILEKSSRIEEQNDKISELIERNQRYVEQSNLMMEKRNTSLQTATENTQAKVTEELAAATAQVSHLQLKVAAHQKKETELQMQLTESMKDTDLLRSQLAKVQAELSELQETSEQAQSKFKSEKQSRRQLELRVTSLEEELTDLRAEKESLEKNLSERKKKSAQERCQAEEEIDEIRKSHQEELDKLRQLLKKARVSTDQAAAEQLSLVQAELQSQWEAKCEHLLASAKDEHLQQYQEVCAQRDASQQKLLQLEAKCSALQAQVTALKEQNAQHLKDLENKPQVSGVEAATADPSEKVKKIMNQVFHCLRGEFELEESYNGRTILGAIMSTIKMVTLELLDQHEREKGESSNEEEEEEERPRSPAQEPSISVSARQSQAPSHREKQEPPVPTEQVVQEAAALPPQALPTPQDDVQGRDGEPSEAEALSEIKEDASPPEPACLASHRALRPPTSIPPPPGPVTVDSECEEALAPSSLGGAFVGEQESSRRLSLTLDSKKGDPLALGPESPEGEPRAPELKNEEGVTSTPAPSQEPCSPEAASSAVGATAGSSHCSQQPSLCEDEDDELFKGATLKVASPKAQAEEEDDDEVVRKSRALPSPPAAPGGPLPPAREKRSAACWWPTPWALCAAPCGSRLGAGRGRLCEHGGDGQIPLYS", "length": 1234, "header": "tr|A0ABB5URD0-1|A0ABB5URD0_PIG Computationally mapped isoform of peptidylprolyl isomerase OS=Sus scrofa OX=9823 GN=FKBP15 PE=1 SV=1 CANONICAL=A0A5G2QLL8-1" }, "locus": { "chromosome": "1", "start_pos": 253868033, "end_pos": 253810722, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107204.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107204.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000081598.1", "url": "https://www.ensembl.org/id/ENSSSCP00000081598.1" } ] } }, { "isoform_ac": "I3LVI2-1", "url": "https://www.uniprot.org/uniprotkb/I3LVI2/entry", "sequence": { "sequence": "MFGASDEDDTDFLSPSGGARLASLFGPDQAVAGHGNEFFQYTAPKQPKKGQGTVSTGNQVTPKTAPTTTGTSTVLVAIAVHAYRYTNGQYVKQGKFGAAVLGNHTAREYRILLYISQQQPVTVARIHLNFELMVRPNNYSTFYDDQRQNWSIMFESEKAAVEFNKQVCIAKCNSTSSLDSVLSQDLVVTEGPAVEVGDSLEVAYTSWVFQNHTLGQVLDSTANKDKLLRLKLGSGKVIKGWEDGMVGMKKGAKRLLFIPPACAAGSEGVIGWSHSTDSILVFEVEIRRVKFARDAGSDGHSVSSRDSAAPSPVPGVDNISADPVVSPSTSVPFKSGESALRSKSNSLSEQLTMNTNPDTVKAKLISRMAKMGQPMLPILPPQLDSNDSEIEDVNALRGAGQPLGTLPIQPSLQPAHPALPQMTSQAPQPSVSGLQTPSAALMQVASLDSHSAVSGNAQSFQPYAGMQAYAYPQAPAVTSQLQPVRPLYPAPLSQSPHFQGSGDVASFLMTEARQHNTEIRMAVSKVADKMDHLMTKVEELQKHSAGNSLLLPGMSVTMETSMIMSNIQRIIQENERLKQEILEKSSRIEEQNDKISELIERNQRYVEQSNLMMEKRNTSLQTATENTQAKVTEELAAATAQVSHLQLKVAAHQKKETELQMQLTESMKDTDLLRSQLAKVQAELSELQETSEQAQSKFKSEKQSRRQLELRVTSLEEELTDLRAEKESLEKNLSERKKKSAQERCQAEEEIDEIRKSHQEELDKLRQLLKKARVSTDQAAAEQLSLVQAELQSQWEAKCEHLLASAKDEHLQQYQEVCAQRDASQQKLLQLEAKCSALQAQVTALKEQNAQHLKDLENKPQVSGVEAATADPSEKVKKIMNQVFHCLRGEFELEESYNGRTILGAIMSTIKMVTLELLDQHEREKGESSNEEEEEEERPRSPAQEPSISVSARQSQAPSHREKQEPPVPTEQVVQEAAALPPQALPTPQDDVQGRDGEPSEAEALSEIKEDASPPEPACLASHRALRPPTSIPPPPGPVTVDSECEEALAPSSLGGAFVGEQESSRRLSLTLDSKKGDPLALGPESPEGEPRAPELKNEEGVTSTPAPSQEPCSPEAASSAVGATAGSSHCSQQPSLCEDEDDELFKGATLKVASPKAQAEEEDDDEVSMKGRPPPTPLFGDDDDDDDIDWLA", "length": 1193, "header": "tr|I3LVI2-1|A0A5G2QLL8_PIG Computationally mapped isoform of peptidylprolyl isomerase OS=Sus scrofa OX=9823 GN=FKBP15 PE=1 SV=4 CANONICAL=A0A5G2QLL8-1" }, "locus": { "chromosome": "1", "start_pos": 253868033, "end_pos": 253808349, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031937.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031937.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000028134.4", "url": "https://www.ensembl.org/id/ENSSSCP00000028134.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1187, "start_aa": "Thr", "end_pos": 1187, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1187", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LVI2", "url": "https://www.uniprot.org/uniprotkb/I3LVI2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "actin binding", "id": "GO:0003779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003779", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLL8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLL8" } ], "pmid": "" }, { "name": "peptidyl-prolyl cis-trans isomerase activity", "id": "GO:0003755", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003755", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLL8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLL8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "early endosome", "id": "GO:0005769", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005769", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLL8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLL8" } ], "pmid": "" }, { "name": "growth cone", "id": "GO:0030426", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030426", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLL8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLL8" } ], "pmid": "" }, { "name": "axon", "id": "GO:0030424", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030424", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLL8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLL8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "endocytosis", "id": "GO:0006897", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006897", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLL8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLL8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 103, "end_pos": 105, "annotation": "n_glycosylation_sequon" }, { "start_pos": 138, "end_pos": 140, "annotation": "n_glycosylation_sequon" }, { "start_pos": 149, "end_pos": 151, "annotation": "n_glycosylation_sequon" }, { "start_pos": 173, "end_pos": 175, "annotation": "n_glycosylation_sequon" }, { "start_pos": 211, "end_pos": 213, "annotation": "n_glycosylation_sequon" }, { "start_pos": 318, "end_pos": 320, "annotation": "n_glycosylation_sequon" }, { "start_pos": 386, "end_pos": 388, "annotation": "n_glycosylation_sequon" }, { "start_pos": 617, "end_pos": 619, "annotation": "n_glycosylation_sequon" }, { "start_pos": 742, "end_pos": 744, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "16237", "name": "", "equation": "[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "16237", "database": "Rhea", "url": 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Pathway" ] }, { "id": "F1SSF0", "url": "https://www.orthodb.org/?gene=F1SSF0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23206", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23206", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23206:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23206:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24171", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24171", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24171:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24171:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00023", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00023", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00536", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00536", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12796", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QLM7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLM7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QLM7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLM7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SSF0", "url": "https://www.uniprot.org/uniprotkb/F1SSF0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SSF0-1", "url": "https://www.uniprot.org/uniprotkb/F1SSF0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGEGGLPPAFQLLLRACDQGDTETARRLLEPGAAEPAERGAEPEAGAEPAGAEAAGPGAAAAAAAAAGAPVPVDCSDEAGNTALQFAAAGGHEQLVRFLLRRGASVNSRNHYGWSALMQAARFGHVSVAHLLLDHGADVNAQNRLGASVLTVASRGGHLGVVKLLLEAGAFVDHHKPLGEQVGDSRDELLGITALMAAIQHGHEAVVRLLIEWGADPNHVARTVGWSPLMLTALIGRLGMAQQLVEKGANPDHLSVLEKTAFEVALDRRHRDLVDYLDPLTTVRPKTDEEKRRPDIFHALKMGNFQLVKEIADEDPNHVNLVNGDGATPLMLAAVMGQLPLVQLLVERHADVDKQDSVHGWTALMQATYHGNKEIVKYLLNQGADVTLRAKNGYTAFDLVMLLSDPDTELVRLLASVCMQVNKDKGRPSHPPPLPHSKVRQPWSVPVLPDDKGGLKSWWNRMSNRFRKLKLMQTLPRGLSSNQPLPFCDEPEPALDSTMRAPPPDKMSRSGLPDVAPMTKDNGPGSTRGEKEDVLLTTMLRNGAPFTRLPSDKLKAVIPPFLPPSSFELWSSDRSRTCHNGKADPMKTVLPQRASRGQPVGSGSTDTTPVRPVKFPSLSRSPASPANSGNFNHSPHSSGGSSGVGGLSRHGGELHNRSGGSIDSVLSQIAAQRKKAAGLSEQKPSHRSSPVGPAPGSSPSELPVSPAAASSVPGGKKLETSKRPPSGTSTTSKSTSPTLTPSPSPKGHAAESSVSSSSSHRQSKSSGGSSSGTITDEDELTGILKKLSLEKYQPIFEEQEVDMEAFLTLTDGDLKELGIKTDGSRQQILAAISELNAGKGRERQILQETIHNFHSSFESSASNTRAPGNNPCRAGRSRPEAAASSQR", "length": 887, "header": "tr|A0A5G2QLM7-1|A0A5G2QLM7_PIG Isoform 1 of Ankyrin repeat and SAM domain-containing protein 6 OS=Sus scrofa OX=9823 GN=ANKS6 PE=3 SV=2 CANONICAL=A0A5G2QLM7-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QLM7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLM7/entry", "sequence": { "sequence": "MGEGGLPPAFQLLLRACDQGDTETARRLLEPGAAEPAERGAEPEAGAEPAGAEAAGPGAAAAAAAAAGAPVPVDCSDEAGNTALQFAAAGGHEQLVRFLLRRGASVNSRNHYGWSALMQAARFGHVSVAHLLLDHGADVNAQNRLGASVLTVASRGGHLGVVKLLLEAGAFVDHHKPLGEQVGDSRDELLGITALMAAIQHGHEAVVRLLIEWGADPNHVARTVGWSPLMLTALIGRLGMAQQLVEKGANPDHLSVLEKTAFEVALDRRHRDLVDYLDPLTTVRPKTDEEKRRPDIFHALKMGNFQLVKEIADEDPNHVNLVNGDGATPLMLAAVMGQLPLVQLLVERHADVDKQDSVHGWTALMQATYHGNKEIVKYLLNQGADVTLRAKNGYTAFDLVMLLSDPDTELVRLLASVCMQVNKDKGRPSHPPPLPHSKVRQPWSVPVLPDDKGGLKSWWNRMSNRFRKLKLMQTLPRGLSSNQPLPFCDEPEPALDSTMRAPPPDKMSRSGLPDVAPMTKDNGPGSTRGEKEDVLLTTMLRNGAPFTRLPSDKLKAVIPPFLPPSSFELWSSDRSRTCHNGKADPMKTVLPQRASRGQPVGSGSTDTTPVRPVKFPSLSRSPASPANSGNFNHSPHSSGGSSGVGGLSRHGGELHNRSGGSIDSVLSQIAAQRKKAAGLSEQKPSHRSSPVGPAPGSSPSELPVSPAAASSVPGGKKLETSKRPPSGTSTTSKSTSPTLTPSPSPKGHAAESSVSSSSSHRQSKSSGGSSSGTITDEDELTGILKKLSLEKYQPIFEEQEVDMEAFLTLTDGDLKELGIKTDGSRQQILAAISELNAGKGRERQILQETIHNFHSSFESSASNTRAPGNNPCRAGRSRPEAAASSQR", "length": 887, "header": "tr|A0A5G2QLM7-1|A0A5G2QLM7_PIG Isoform 1 of Ankyrin repeat and SAM domain-containing protein 6 OS=Sus scrofa OX=9823 GN=ANKS6 PE=3 SV=2 CANONICAL=A0A5G2QLM7-1" }, "locus": { "chromosome": "1", "start_pos": 240584297, "end_pos": 240523728, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067862.2", "url": "https://www.ensembl.org/id/ENSSSCT00000067862.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065471.2", "url": "https://www.ensembl.org/id/ENSSSCP00000065471.2" } ] } }, { "isoform_ac": "F1SSF0-1", "url": "https://www.uniprot.org/uniprotkb/F1SSF0/entry", "sequence": { "sequence": "MGEGGLPPAFQLLLRACDQGDTETARRLLEPGAAEPAERGAEPEAGAEPAGAEAAGPGAAAAAAAAAGAPVPVDCSDEAGNTALQFAAAGGHEQLVRFLLRRGASVNSRNHYGWSALMQAARFGHVSVAHLLLDHGADVNAQNRLGASVLTVASRGGHLGVVKLLLEAGAFVDHHKPLGEQVGDSRDELLGITALMAAIQHGHEAVVRLLIEWGADPNHVARTVGWSPLMLTALIGRLGMAQQLVEKGANPDHLSVLEKTAFEVALDRRHRDLVDYLDPLTTVRPKTDEEKRRPDIFHALKMGNFQLVKEIADEDPNHVNLVNGDGATPLMLAAVMGQLPLVQLLVERHADVDKQDSVHGWTALMQATYHGNKEIVKYLLNQGADVTLRAKNGYTAFDLVMLLSDPDTELVRLLASVCMQVNKDKGRPSHPPPLPHSKVRQPWSVPVLPDDKGGLKSWWNRMSNRFRKLKLMQTLPRGLSSNQPLPFCDEPEPALDSTMRAPPPDKMSRSGLPDVAPMTKDNGPGSTRGEKEDVLLTTMLRNGAPFTRLPSDKLKAVIPPFLPPSSFELWSSDRSRTCHNGKADPMKTVLPQRASRGQPVGSGSTDTTPVRPVKFPSLSRSPASPANSGNFNHSPHSSGGSSGVGGLSRHGGELHNRSGGSIDSVLSQIAAQRKKAAGLSEQKPSHRSSPVGPAPGSSPSELPVSPAAASSVPGGKKLETSKRPPSGTSTTSKSTSPTLTPSPSPKGHAAESSVSSSSSHRQSKSSGGSSSGTITDEDELTGILKKLSLEKYQPIFEEQEVDMEAFLTLTDGDLKELGIKTDGSRQQILAAISELNAGKGRERQILQETIHNFHSSFESSASNTRAPGNNPCT", "length": 873, "header": "tr|F1SSF0-1|A0A5G2QLM7_PIG Computationally mapped isoform of Ankyrin repeat and SAM domain-containing protein 6 OS=Sus scrofa OX=9823 GN=ANKS6 PE=3 SV=3 CANONICAL=A0A5G2QLM7-1" }, "locus": { "chromosome": "1", "start_pos": 240584297, "end_pos": 240527614, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005918.4", "url": "https://www.ensembl.org/id/ENSSSCT00000005918.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005771.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005771.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SSF0", "url": "https://www.uniprot.org/uniprotkb/F1SSF0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152629", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152629", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLM7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLM7" } ], "pmid": "" }, { "name": "ciliary inversin compartment", "id": "GO:0097543", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097543", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLM7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLM7" } ], "pmid": "" }, { "name": "cilium", "id": "GO:0005929", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005929", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLM7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLM7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "nucleotidyltransferase activity", "id": "GO:0016779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016779", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLM7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLM7" } ], "pmid": "" }, { "name": "NAD+ poly-ADP-ribosyltransferase activity", "id": "GO:0003950", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003950", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLM7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLM7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 632, "end_pos": 634, "annotation": "n_glycosylation_sequon" }, { "start_pos": 656, "end_pos": 658, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QLM7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 887, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QLM7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QLM7" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QLM7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLM7" }, { "id": "PS50105", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50105" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SAM", "eco_id": 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"categories": [ "Protein" ] } ], "sequence": { "sequence": "MTGGENTTNITAFVLLGFSDFPHIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHIPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYVVFSTMGLSECGLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVRVLTAVFTVIFGIINALVIMMSYVYIVISIMKITSAKGWSKAFNTCASHLTAVTLFYTSGIFVNLNSSSGGSSGLDRFAAVFYTLVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 312, "header": "tr|A0A5G2QM02-1|A0A5G2QM02_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN=LOC100623139 PE=3 SV=1 CANONICAL=A0A5G2QM02-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QM02-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM02/entry", "sequence": { "sequence": "MTGGENTTNITAFVLLGFSDFPHIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHIPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYVVFSTMGLSECGLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVRVLTAVFTVIFGIINALVIMMSYVYIVISIMKITSAKGWSKAFNTCASHLTAVTLFYTSGIFVNLNSSSGGSSGLDRFAAVFYTLVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 312, "header": "tr|A0A5G2QM02-1|A0A5G2QM02_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN=LOC100623139 PE=3 SV=1 CANONICAL=A0A5G2QM02-1" }, "locus": { "chromosome": "AEMK02000637.1", "start_pos": 68280, "end_pos": 67345, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072008.1", "url": "https://www.ensembl.org/id/ENSSSCT00000072008.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065055.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065055.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM02", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM02" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100623139", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623139", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A075B5S0-1", "protein_name": "Immunoglobulin heavy variable 16-1", "gene_name": "Ighv16-1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "EVQLVESGGSLGQPGGSTKLSCEEASGFTFSDHWMDWFRQAPGMRLEWLANTNHDESGKGYAESVKDRFSISRDNSENLLYLQMNSLRNEDTALYYCAR", "length": 99 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B603-1", "protein_name": "T cell receptor alpha variable 6D-6", "gene_name": "Trav6-6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSPGFVAVILLILGRTHGDSVTQTEGPVTVSESESLIINCTYSATSIAYPNLFWYVRYPGEGLQLLLKVITAGQKGSSRGFEATYNKETTSFHLQKASVQESDSAVYYCALG", "length": 114 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B625-1", "protein_name": "T cell receptor alpha variable 4N-3", "gene_name": "Trav4n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERNLGAVLGILWVQICWVSGDKVKQSPSALSLQEGTNSALRCNFSIAATTVQWFLQNPRGSLMNLFYLVPGTKENGRLKSAFDSKESYSTLHIRDAQLEDSGTYFCAAE", "length": 110 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B695-1", "protein_name": "T cell receptor alpha variable 9D-3", "gene_name": "Trav9d-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLALLPVLGIHFLLRDAQAQSVTQPDARVTVSEGASLQLRCKYSYFGTPYLFWYVQYPRQGLQLLLKYYPGDPVVQGVNGFEAEFSKSNSSFHLRKASVHWSDWAVYFCAVS", "length": 113 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6B4-1", "protein_name": "T cell receptor alpha variable 6-4", "gene_name": "Trav6-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNTSPVLVTVMLLFMLGMRKTHGDSVTQKQGQVTLSEDDFLFINCTYSTTTYPTLLWYVQYLGQGPQLLLKVTTANNKGISRGFEATYDKGTTSFHLQKASVQESDSAVYFCALV", "length": 115 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6D8-1", "protein_name": "T cell receptor alpha variable 3-3", "gene_name": "Trav3-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "GEQVEQRPPHLSVREGDSAVITCTYTDPNSYYFFWYKQEPGASLQLLMKVFSSTEINEGQGFTVLLNKKDKRLSLNLTAAHPGDSAAYFCAV", "length": 92 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B759-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4E", "gene_name": "PPIAL4E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A075B767-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4H", "gene_name": "PPIAL4H", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFDITVDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTDDKSIYGEKFDDENLIRKHTGSGILSMVNAGPNTNGSQLFICTAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WP50-1", "protein_name": "Secretoglobin, family 1B, member 15", "gene_name": "Scgb1b17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMLAGAVVIFGVALLLLSSWGDCGICPAMKEDVHLFLNGTSEEYVEYVKQYKDDPEILENTEKIKQCVDSTLMEEDKAHANGFIEKIEASPLC", "length": 93 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPA9-1", "protein_name": "Secretoglobin, family 2B, member 18", "gene_name": "Scgb2b18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQSCYSEERIRNILLEPKIMEAMVASPECRSYHSFNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPG5-1", "protein_name": "Predicted gene 13283", "gene_name": "Gm13283", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLADLRSVPGHQCLRDRTDFPCPWKEGTNITQMTLGETTSCYSQSLRQVLHRFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPY7-1", "protein_name": "RNA binding motif protein Y-linked family member 4", "gene_name": "Rbmyf4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKR", "length": 166 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQA9-1", "protein_name": "Secretoglobin, family 2B, member 21", "gene_name": "Scgb2b21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACVPFFEGYASVVSGSRVWMYQEFQAFDATAEEKVALEKIQGCYREESLRNILLEPKIMEAMVASPECLSYYSSNNIRCILDLLSKLLGQ", "length": 112 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQJ0-1", "protein_name": "Secretoglobin, family 1B, member 11", "gene_name": "Scgb1b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLVAAVVILGAALLLLTSGGDCGICPAIKEDVRLFLNGTSEEYVEYVKQYKDDPVILENTAKINQCVDSTLTEKDMTHTTTFLKKIEDSLLC", "length": 93 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQP8-1", "protein_name": "Predicted gene, 21698", "gene_name": "Gm21698", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHGQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR36-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r90", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNEAMKTTEEVALQIVLLCQFGIGTMANILLFIHNFSPLLTGCQLRPKQVICTNMAVSSILILFMTVFPNNVFVVQRNLMNDLQCKLEYFLRMVARSINLCSTCVLSTYQFVTLLPGNFGEMMVRGRRSKVISYSCCSCWLFGVLYNVYIPMKVSGPQNTHNKTDIKSKWFCVTSGFSVGIMFLWFAHDAIFISIMIWTSVSMVLLLYRHYQRLQYIFPPHQGTRGYAEIRAAHSIAMLVVTFVSFYLLHCICFILHIVFVDSRLWLRHVGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYRKPVI", "length": 309 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR44-1", "protein_name": "BTB domain containing 35, family member 15", "gene_name": "Btbd35f15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR49-1", "protein_name": "Secretoglobin, family 2B, member 11", "gene_name": "Scgb2b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQGCYSEERIRNILLEPKIMEAMVASPECRSYHSLNNFRSILEFISNLLGE", "length": 112 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSM5-1", "protein_name": "Predicted gene 29049", "gene_name": "Gm29049", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTSLKKKSRRKPSSQALGNIVGCRISYGWKEGNEPVTHWKAIILGQLPTNPSLYLVKYDGIDSVYGQELHSDERILNLKVLPHKVVFLQVRDVHLASALVCREVQHKFEGKDGSEDNWSGMVLAQVPFLQDYFYISYKKDPVLYVYQLLDDYKEGNLHIIPETPLAEARSGDDNDFLIGSWVQYTRDDGSKKFGKVVYKVLANSTVYCIKFLGDLHIYVYTLVSNIT", "length": 227 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSN2-1", "protein_name": "BTB domain containing 35, family member 16", "gene_name": "Btbd35f16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLLFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLNFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WUL8-1", "protein_name": "NBPF family member NBPF19", "gene_name": "NBPF19", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRNLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLFHSQERELTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGPYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNSVLMEVEEPEVLQDSLDGCYSTPSMYFELPDSFQHYRSVFYSFEEEHISFALYLDNRFFTLTVTSLHLVFQMLVIFPQ", "length": 3843 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WXS9-1", "protein_name": "TBC1 domain family member 3I", "gene_name": "TBC1D3I", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKMKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087X179-1", "protein_name": "TBC1 domain family member 3E", "gene_name": "TBC1D3E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDQAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKKSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0A0MQP3-1", "protein_name": "BTB domain containing 35, family member 12", "gene_name": "Btbd35f12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDSDLSITPLEVPQGLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YW58-1", "protein_name": "Immunoglobulin heavy variable V8-2", "gene_name": "Ighv8-2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGRLTFSFLLLLPVPAYVLSQVTLKVSGPGILQPSQTLSLACTFSGISLSTSGMGLSWLRKPSGKALEWLASIWNNDNYYNPSLKSRLTISKETSNYQVFLKLTSVDTADSATYYGAWR", "length": 119 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXW2-1", "protein_name": "Predicted gene, 20773", "gene_name": "Gm20773", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKIFKVEKS", "length": 232 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXX7-1", "protein_name": "Predicted gene, 20807", "gene_name": "Gm20807", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHTFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKVLEVEKS", "length": 232 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0B4J1J8-1", "protein_name": "T cell receptor gamma, variable 4", "gene_name": "Trgv4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNPGSQALLPLYLPWEANLADENPLLKVVIFLCLLTFGHGKLEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYG", "length": 138 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JE01-1", "protein_name": "Predicted gene, 21663", "gene_name": "Gm21663", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADPPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JGR8-1", "protein_name": "Predicted gene, 21680", "gene_name": "Gm21680", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPSESNEGRRRWTWRMWMAHRQTTSPVPVTSKKQFEKEEKELIKKIQLTTKEINELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELVLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JMD5-1", "protein_name": "PRAME family member 33", "gene_name": "PRAMEF33", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSLQAPSRLLELAGQSLLRNQFLTIFTLDELPREVFPLMFMEAFSMRRFEALKLMVQAWPFLRLPLGSLMKTPHLETLQAVLRGLDTLVAQKVRPRRWKLQVLDLQDVDENFWTIWSGARVLSCSPEAMSKRQTVEDCPRMGEHQPLKVFIDLCLKESTLDECLSYLFGWIHYRRGLVHLCCSKVQNYSMPTSSFRNLLERIYPDSIQELEVWKKCSLNKTGKFAPYLSQMSNLRELFLAFGYERELYVSVQWPCIPDLDSPFLCLYYPQMLYIKKISNIKEHLEHLLRYLKNPLGAFIFSDAYLADRDMECLSQYPSLSQLKELRLIHILMWTTNLQPLGALLEKVAATLKTLVLKDCRIQDPQLRVLLPALSHCSQLTTFNFHGNETSMNALKDLLRHTRGLSKLGLELYPAPLESLDYKGHVNWEILTPIRAELMRTLREVRQPKRIFFGPVPCPTCGSWPSEKVDFHLCS", "length": 474 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JNH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC124905359", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKIANNTVVTEFILLGLTQSQDIQLLVFVLILIFYLIILPGNFLIIFTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFFSEKKVISYRGCITQLFFLHFLGGGEGLLLVVMAFDRYIAICRPLHCSTVMNPRACYAMMLALWLGGFVHSIIQVVLILRLPFCGPNQLDNFFCDVRQVIKLACTDMFVVELLMVFNSGLMTLLCFLGLLASYAVILCHVRRAASEGKNKAMSMCTTRVIIILLMFGPAIFIYMCPFRALPADKMVSLFHTVIFPLMNPMIYTLRNQEVKTSMKRLLSRHVVCQVDFIIRN", "length": 316 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JTV6-1", "protein_name": "RIKEN cDNA 4931429L15 gene like", "gene_name": "4931429L15Rikl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQFNPFSQDTWRHGHRRAYSNISERLSCLTLQEPSVSHLYQIFSPGDRRSYLLDDSLSNSIQRESLAVPMGLEDSGSRGQQKQQQPGAVLEDLEEQEIAPTDVKYRLQLLDEAPLRSKSSSVQSQGHKPGWIPSSKTHREWFKPWKMDMTYPENERSHSGHTQGRRMTPRAQWRHVEYDSQDQDTQSPVWSQALFPGLDKSSQGVIQCTQHVSREREMVSGWSMTHAPQEMGQAKQGPAFLKTKGTAKFNVATTARMSCLPPLKLLEKKVKSRCPPNTPGIFQDWRAQPQGLYGSDERLLAPFEDQVNTRVTYMPLFTEKVKFVSPKTAVSNPKQTHSQLSRTNQPAFPGQFRNWTSGREHLEKGLPE", "length": 368 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JVP7-1", "protein_name": "40S ribosomal protein S26", "gene_name": "Rps26-ps4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKKRRNNGRTKKGRGHVQPIGCANCSWCVPKDKAIKKFVIWNIVETAAVRDISEARIFDAYVLPKLYVKLHYCVSLAIHSKVIRNQSHEARKDRTSPPRFRPAGAAPRPPPKPM", "length": 115 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW93-1", "protein_name": "High mobility group protein B4", "gene_name": "Hmgb4l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGKDSKVRPKVNVSPYVHFMMDFRNQTREQQPNTYYDFTEFSRKCSEKWKTISKKEKKKYEALAKRDKDRYQREMRNYSGPRRERRRRDPDAPRKPPSSFLLFSQDHFDEIKEQHPNWTVAQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAYYHQCQRGE", "length": 168 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW96-1", "protein_name": "Zinc finger protein 94 like 1", "gene_name": "Zfp94l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLPRGSCDVMLESLRNVASLGHRIGTPDGLLRLKREDMFWLLTVARWSSGSMGDKNLEDMEFLEEVGLRHLPHEELFCSQIWQRITRELTKVRDCRVRVGENGSPMKRDNREDEYSKHSSQNSVFQVHHRECHEEEANERDFGCSHHLRTSTGEKSYKCEKCHNASHWFSSLQSHQGVCDRPRWNKSVSQFKIFRQWPLFHYQQSMPNGENAQEYEACGNAGKNSSGQTALFVHTAEEPYSCEECGARFSQSSYLQVHQRVHTGEKPYKCEECGKGFGWLSQLHAHHQSHTGEKPYTCDACGKGFSYSSHLNIHCRIHTGEKPYQCEECGKGFSQASNLLAHQRGHTGEKPYQCDACGKGFSRISDFNIHIRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGEKPYKCNTCGKSFRRSSDLNVHCRIHTGEKPYRCEKCDKVFSQFSSLQVHQRVHTGEKPYQCSECGKGFSVGSQLQAHQRCHTGERPYQCEECGKGFCRASNFLAHHGVHTGEKPYRCDMCGKHFRQRSYLQAHHRVHTGEKQFRCEECGKGFSWSSYLQAHQRVHMGEKPYKCEECGKGFSWSSSLLTHQRVHAEDEGQKDLSSSGGSYRK", "length": 616 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JYP5-1", "protein_name": "Olfactory receptor", "gene_name": "Or8g52b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEGNHSRVTEFILTGLTDKPELQLPLFLLFLGIYLLTVLGNLGMIILILLSSHLQTPMYFFLSGLSFIDLGYSTVIIPKMLVNFVTEKNVISYPGCMTQLYCFIAFVLCECYMLSAMAFDRYVAICNPLRYNVTMSYQVCFWMIGGVYSIGFIEATIHTVCMLQVFFCKANVVNHFFCDLLPLFQLACSSTFVNETVLLCLSTLNFCVPTLTILSSYSFIIARIIRIKSTESRFKAFSTCSSHFSSVAVFFGSLGFVYFQPSSVSSKDQGKVSSVFYTIIVPMLNPLIYSLRNKDVKLALNKLFQKKIFHM", "length": 312 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K381-1", "protein_name": "Killer cell lectin-like receptor, subfamily A, member 4", "gene_name": "Klra4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQEVTYSTLRFHNSSGLQNQVKTNETQGPRETGHRGCSVSWHLIMIPLGILCSILLVTVAVLVTHIFQYSQEKHELQEALNKLHHNYSTMQNESYLNEEMLGNKSSECDAYKSVLDSLNRQQNTCLRLTNIVLDCLQHKGRQVNVHLFCCGIKCYYFIMDKKQWKECEQACQGCKLSLLTIDDEDELKFLQLQVTPDSYWIGLSYDNKKHDSAWIDNNPSKL", "length": 224 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K3S0-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c109", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNQSFVNEFILLGLSQNPQIKKISFVIFLLVYIATLVGNMMIVVTIAYSPALLGSPMYFFLAVLSFLDACVSSVVTPKMIVDMVYERKSISFECCMTQVFAVHFLTAVEVIVLAAMAYDRYVAICKPLHYSSIMNRRLCGTLVGVAWAGGFLHSIIQIAFTLPLPFCGPNVIDHFICDLFPLLKLACTDTHIFIILVFANSGSICIIIFSFLLISYGVILFALRAHSSEGRRKALSTCGSHITVVVFFFVPCILIYARPTSAFSFEKNVFVFTDVLTPLLNPMVYTFRNKEMINAIRKMWKRLIVVSDKY", "length": 311 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K622-1", "protein_name": "Histone RNA hairpin-binding protein", "gene_name": "Slbpl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLSSRMEMVSVGVTTEPCHARWEVETDEVVLRRRQKQIDYGKCTPGYQSFLQQVPRAQRQPGFHPQTPNKNRRYSRRSWDAQIRQWRRALHTWDPPSQPLHDRQAEGKAAGNFLRPVDTAPLDDLLDNWPQDPESSENWDRGEKEAQFAYLKVPASCPPQLKDELLHH", "length": 169 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K698-1", "protein_name": "Lamin tail domain containing 1", "gene_name": "Lmntd1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSHLASSHRVQKSSLARPERRAKSPSYTDISFWVPVMHRVGSQYQFESVCEQSSGYPGMPAQQVTPVPSQRGGILRKEEKTGTITPSKQHSSVHFFPKVMDSSSTLHLLSGSFSHEASANFHQIPSAQDSLSPGGLLTSKSNVPSCSRKDSIPGKQSTHQAASPGTSLMTLKKQPKPSSDLDTYVLGDGEDYFLSLFGDSKKLTSHTSQAEDVSKHLSVILEEVGQFVSSSLGDIKIAEVNVKGFFVRLVNSSNEKEVEIGNYILQQNVNGQAVSLYRFPHNITMQASGTVTVWAAASEAKPQQPTDFVWEEQSRFRSSPDCTTILCKPSGEAIAWYTPIHWKQAWEKLETDIEFERCSVVIPSLKSHIFGRTTSSVSSINKEKQEPTQKTPPQVCSVLLREKEILLTVLPNKSPWCRSPDTPPHPYSSLIEWHDSDFPGSSLGTQPKPQSTKPKPDPGTKEKKSTR", "length": 467 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6E6-1", "protein_name": "Rho GTPase-activating protein 20-like", "gene_name": "LOC120093152", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDEELVRANKTCTCKTIFFYWATGNALATFRSEEQKVQWYTFLTSRSISEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHKIEDYQLWFSPGHKEAPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERRRKSCMTSCFHGGCVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTKSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAVASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQAEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKMFYGRDLSKKLSIIQFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKANTKELEMSSAVPHEGGPTAGHNGTTSKYNVPQEIILHD", "length": 835 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6V9-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVVFFLGQGSYGRVRLAWHRRTQALVAIKTVEISKDTIRGILSEMTTLESLNHPNIISLYEVLITGTGVHFILQYAPGGNLGKLISEEGPLPEEKAKKMFGQVVSAIRYCHSLDIVHRDIKPQNILIDGEGNIKLIDFGQAIKCKPGTLLSRHCGTRDFNAPELVLREPYDGKSSDVWSLGVVLYFFTTGYLPFRGKTINDVEERITTGTYTIPTHLSGQLENLIHQILRVSPDMRPSVEEIENHPWIKKCEFKILPKTDPDYKIIEMLCAMGYKAKDILESLQKKRYDEPMGAYLSLKDHVSKGFDVGYITPAKPGDPCPPPPPSPAHPSVFGLPLRRRASEPIFGLHHRPPSREQNPLDLILSGLKMSRCVSMPPIAVYYPKKERSTSTRALHSTPVACPCVSNNMSEVEIILPPKQDIEMNTSSPPQRMGWFKRLRKGIRDCFSRLCCLPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K894-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAHLLNVTEFIFLGLSPNKEGQRVCFVLFLLLYMAIVLGNLLMVVTVAASRNLGSPMYFFLSFLSFVEICYSSTTAPKLIFDLLAEKKSISVWGCMTQLFFMHFFGGTEIFLLTMMAYDRYVAICKPLHYTSIMNQQVCAVLVGSAWIGGFVHSFSQILLILPLSFCGPNVIDHYFCDLLPVLKLACSDTFLIGLLIVVNGGTLSVISFVVLLASYLVILFHLRTQSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRPSDTLPVDKMIAVFYTVITPLLNPLIYSLRNAEVKKAMKNLWFRIMKADEK", "length": 309 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KB39-1", "protein_name": "Myb/SANT DNA binding domain containing 5 like 1", "gene_name": "Msantd5l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQREANQGESLENTEESNVGKSVKEEEQRPSGRSRSSWTDSEIRVFLQEWEVVEQEMGQPGRKLHKKTKSLCQRLYQQGLKKSWKSCFHLLLSLQDLHRTLCNERPGIEPLFSPYSEALYRILGSTPHESWFPGPLYDEADDSMLPVYPQPPMYQPSDYGITVPSAQLQGNPVPMMCQEDSPFPTWEPWNPSYPLSVPHLLPGFAPGDPSLQQPWSMCDLHQDPQ", "length": 225 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KBC9-1", "protein_name": "Leukocyte immunoglobulin-like receptor subfamily B member 3-like", "gene_name": "Lilrb3l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTFTFTALLCLGLTLRLWIPVLTGSLPKPILRVQPDSVVSMGTKVTFVCEETIGVKESHLYRNGNLQRTVLKNHQKPTNKTEFSFSNVDQQMQQYQCSYRTQTKSSDYSEPLELVVTGAYSKPSLSAQTNPVVTSGGYVTLKCEPSQDNHTLILTVEGSQKHSWRKDPECNRYTEKCHALFYVGPLTSNQRWIFRCYSYEKHTPQVWSAPSEPVELLVSGKLQKTTIKAEPGSVIRSGRAMTIWCQGDLDAEIYFLHKEGSHNTQSTQTLQQPGNKAKFLIPSVTQRHAGQYRCYCYSSAGWSEPSDTLELVVTGIYYYGVKLSGLPSPVVPEGGNVTLHCTSHSNYDKFILTKEDQKFTSSLDAEYIPSTGQHQALFVMGPMTPNYSGTFRCYGYYKHTPQLWSVPSELLKIFISGPSRKPSLLSHQGHILEPGMSLTLQCYSDTKYDKFALYKEGGTDIIESFSQWTKAGLSMTNFTLSVMPNSTVHSGENVTLMCWSTYSVDTFILSKEGSGQPPLRLKSKIQDQQYQSEFSMSGVTSKLSGTYRCYGSHDSSLYLKALIGVSVAFLLFLFILIFILLRRRHQEKFRKDDEDAQKGKELQLSTGAAEPVTRDRGHQKRSNPAAATQEESLYASVEDMETKDGVELDTWKPPEGDPQGETYAQVEPSRLRRAGAISPVVSREQLNTKYEQAEEGQEVDSQATESEEPQDVTYAQLCSRTLRQGTAAPPLSQAGEAPEEPSVYAALATARPGAVPKNKKQ", "length": 761 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KIH5-1", "protein_name": "Major histocompatibility complex class I LLA precursor", "gene_name": "mhc1lla", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTGKVLFVLFLLSAPTTVLTDSHSLWLLGTYIKGETQFPKLSFTVMLDDLRVGFYNSETKEFIPRDNTTNEDEAVSDVLTVIQNTLEPFMMSTLTFKNGTESPQLFQITWHCELLDNDKPGQIIFKIAFSGSTTDEVSFYNDNFTCQCQNNMATVPLESFQMHYETVCYPNCIATIRDYLKKRQTQVNGKVQPKVRLIKKVHPKSGGFRLSCLATEFYPHSINLTLLRDGQPVSDHEVTGGNLLPNGDGTYQMRKSLEIRADEREKHKYTCSVSHLSLDKILDIDFEFDPSFLIKIVIPVVVLLSLMLVLTAVLIHKCKNKRAESKETITTASTPEPTEMSETLRK", "length": 346 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IEQ0-1", "protein_name": "Guanine nucleotide-binding protein subunit alpha", "gene_name": "gna11a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTLESMMACCMSEEAKESKRINAEIDKQLRRDKRDARRELKLLLLGESGKSTFIKQMRIIHGTGYTDEDKRGYTKLVYQNIFTSMQAMIRATEHLKIPFRFEDNKKNALLVREVDVEKVCSFEQPYVAAINKLWMDPGIQEAYDRRREYQLSDSTKYYLNDLERISSRGYMPTQQDVLRVRVPTTGIIEYPFDLENIIFSYLSDLERISDPSYLPTQQDVLRVRIPTTGIIEYPFDLQSIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKILCSHLVDYFPEFDGPQNDAQSAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQHNLKEYNLV", "length": 400 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4ILG2-1", "protein_name": "FXYD domain-containing ion transport regulator", "gene_name": "fxyd2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGVESPEHSDADFTYDYELIRRGGLIFAAVLFCLGMVIIFSKKLRCGKSSATHEDNGDL", "length": 59 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IU63-1", "protein_name": "Metabotropic glutamate receptor 5", "gene_name": "grm1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMLILRMNFFIVFLLFCTRLHLSTERSAVSRAASRSVARMDGDIIIGALFSVHHQPSAEKVAERKCGEIREQYGIQRVEAMFYTLDRINSDPYLLPNITLGCEIRDSCWHSSVALEQSIEFIRDSLISIRDEREGPKWCVEGNPSAQPPATKKPIAGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSIDLSDKTLYKYFLRVVPSDTLQARALLDIVKRYNWTYVSAVHTEGNYGESGMEAFKELASQEGLCIAHSDKIYSNAGEKHFDRLLRKLRERLPKARVVVCFCEGMTVRGLLMAMRRLGVAGEFLLIGSDGWADRDEVVEGYEEEAVGGITVKLQTEEVTSFNDYFLKLRLATNNRNPWFAEFWQHRFQCRLAGHPQENTNYRKNCSGYESLEDNYVQDSKMGFVINAIYAMAHGLHDMHEHLCPGHVGLCEEMDPIDGSKLLDFLLKTSFAGVSGEDVWFDENGDSPGRYDIMNLQYVEPGVFDYINVGSWHEGILSIDDYMIQMNRSEMVRSVCSEPCSKGEIKVIRKGEVSCCWICTPCKDNEYVQDEFTCKACELGWWPDEELQVCEPLPLRYLEWSHPESIAAVVFSCLGILVTSFVTLVFILYRDTPVVKSSSRELCYIILAGIFLGYICPFTLIARPSIASCYLQRLLVGLSASMCYSALVTKTNRIARILAGSKKKICTRKPRFMSAWAQVVIAFILISMQLTLEVTLIILEPPEPIKSYPSIREVFLICNTSNMGMVAPLGYNGLLILSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTSFSVSLSVTVALGCMFTPKMYIIIAKPERNVRSAFTTSDVVRMHVGDGKIACRSNSLLNMFKRKKNASGNANSNGKSVSWSEPGSRHPPKGEHMWHRLSVHVKKQEAGSNQTAIIKPLTNTYNNPGMEFSDLSTKTLYNVAEEDEIDPIRYNPSNSPHLMAPVSKPMKEVGANLTFYTPEQHVPQQNSVLPQHAMIEHFQDDVVKYNSNMADLDEIISLPEPTDGIILALQPQVLHPHPILPMNVYQDEPSSPLEEVENEQFGLLHGYMYDNAQIHDEEELVQIKMAMEDSMALMPPSPFRDSLGSGSPVRNSPVSESVLCTPPSVTYASVILRDYKQSSSTL", "length": 1158 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IUN8-1", "protein_name": "Trypsin inhibitor ClTI-1-like precursor", "gene_name": "spink2.9", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLAQIVLLLCLSVMATAADKCPSVPNCSRYHPHACTMEYWPVCGSDGNTYGNECELCATIFEEKLNIILISKKGEC", "length": 76 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4J2B9-1", "protein_name": "BTB domain containing 35, family member 23", "gene_name": "Btbd35f23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPVSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFTNILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQKCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICNLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNQEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A140T8Q5-1", "protein_name": "BTB domain containing 35, family member 21", "gene_name": "Btbd35f21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMILYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GQX3-1", "protein_name": "Cortexin domain containing 2", "gene_name": "Ctxnd2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCVLMEDSSMSNGIDVDKGFAIAFVVLVFVFLIVMVFRCVKLVKNPYEVSSTTADLPLN", "length": 59 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GRH6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 3", "gene_name": "Zscan4-ps3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVRQFPHGARRASQGTPSHHVDIQSPPTTADVTMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGFPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCKSHQKRFCRDAKLYKCEECSRMFKHARSLSSHQKTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GS00-1", "protein_name": "Predicted gene, 36210", "gene_name": "Gm36210", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHPGSPAAPGVSEPGPRELCAFVSGASAHMLRALQPRRIRPSKRRPNHRRFLHNQICREFAKIEAATQHLALTILSQKAPAQRPPFRRPPPPPPSPFLGVACAEAPMEAPHGSPSLSPVALDTSTLDLFDDILLTPTPRPLVTPDSFCQTLPAGNPQVASDVISHALGPGDQGQPTPIQAPRFSNLLLPPQKAQGGSLEPAALGCGWVDSWEAPYACDPQGVLDSWGAL", "length": 229 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSB3-1", "protein_name": "Family with sequence similarity 236, member D", "gene_name": "Fam236d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATEGVATAHTMLTSRGPRDTREPAPPTRSWRSRFQRALARVSKFFRRGRRTARG", "length": 72 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSI2-1", "protein_name": "Family with sequence similarity 236, member C", "gene_name": "Fam236c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATAHTKENSSRGPRETREPAPCTRSWRSRFQRAVARVSKFFRRRRRST", "length": 66 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYU6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 2", "gene_name": "Zscan4-ps2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEGNVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSVPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYV3-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 1", "gene_name": "Zscan4-ps1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWAIQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYTLTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNTSCNATEGNVGERCGGNEMDSLLIIQKEQHPEHEEGNVVCRFPHGARRASQGNSSHHVDFRSALTPADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSSDNIPRKKTDSLSINKRIYHPEPEVGDIPYGVPHDSTRASQGTSTCLQESLGECFSEKDPREVPGLESRQEEPISDPVLLGKNHEANLPCESHHKRFRRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCFTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1D5P3Y4-1", "protein_name": "Large ribosomal subunit protein uL24m", "gene_name": "MRPL24", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MRLSALLRLAAPPKLPKGYRHGTWRPGTAAERLRNPPGQRRKKIFVEPISREDWKVFRGDTVQVLTGKDAGKQGMVTQVVRARNWVVVEGLNTHYRYVNRDAKYSSTYIASEAPLLLNQISLVDPEDRKPTEVDWRYTEEGERVRVSLRTGRIIPLPLWQRRDGIVPEQWIDGPKDTSVDDALDKTYTPSLKTFEEEIMDAMGIVETRRAKKSYWY", "length": 216 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5PNZ8-1", "protein_name": "ODF3A protein", "gene_name": "LOC124417034", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPATKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5RLF0-1", "protein_name": "F-box and WD-40 domain protein 27", "gene_name": "Fbxw27", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METHLPSLPLMKIFSYLDAYSLLQVAQVNKNWNALASSDVLWRKLCQKRWLFCDMVTLQLQDKETWKQFFVYRTWQEHSKTRANPRDFTYKEIPLQYGPCGYACYISGCGITRKGQDKSVVCMVNSKNTISTWDVHKSVITWVSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNILESPCKSLKAVITKDDPIVLVSDILGNLYIFRIPDLHLISTVNVLPCDIDEIYCSPQKKWVLLSKKQPYILPKVFYMSSLLRTSEFSAPVSTLLEISLCQEAFWTPRREDRLTLMSRSGCSKITKFETYDMKLEEFGNKIIVKGNSIAGFLLPYYTESLNWFGVSDKDTIVCSTEFSLLLFTNNGHRLQTFQYFSETIVRLSVDPVHVIVTCNDGSLDVYAWEERSLLLRKCYRLKNRRHLSPRGFINKTLCDDVSIIQLMIDGHDTWFLMAYALNICS", "length": 466 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1P8ASP4-1", "protein_name": "Serine/threonine-protein kinase PRP4 homolog", "gene_name": "PRP4KB", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVSDKHVESNHRKHRRSFSPSDEVFKSPKRHKSRHHHRRHGHRHHRDEEVQYNDDENVNGGDLDMEEGEILGKEGIGETLKKKLESVDEFGDIKSGQFRENNLAFNGDDGFPLICKSWIRVYNYLSYKCHGRNQRRERECEKRKEIEPDRERRKERGSVDRDSRGDREKDYLRDRDNDRGRSRDKARYSSRERGRENERERRSEKDRDKGREFQSDREKHKSLDDGYGEVRHKHSGHSRHDAEDDLELRSPTSVNGHDPNSGDVKETRGNVERTRIDNDDKGDVVVWEVEQEDEELNLIEESRRRTQAIMEKYKKKLEQQNGFSSHDLELANIPKQSSTVADVLGSGTLGPVTSAVNQAKAGLDIDAVDGEVAKLSSAVGESPAQLVISDSDRTLASTGLGEGSPKDKISDDMFTDDIFGESPADSQKMVCTLTQIIDLVFIEFSNSGFICFVFPVHHLTRYSRNGLPFVHYIFVGYLRGKGNGIPIVRSGLDDNWDDAEGYYSYQLGELLDDRYEIMATHGKGVFSTVVRAKDTKAELGEPEEVAIKIIRNNETMHKAGQTEIQILKKLAGSDPENKRHCVRFLSTFKYRNHLCLVFESLHLNLREIVKKYGRNIGIQLSGVRVYATQLFISLKHLKNCGVLHCDIKPDNMLVNEGRNTLKLCDFGSAMFAGTNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELFSGKIMFPGSTNNEMLRLHMELKGAFPKKMLRKGAFIDQHFDKDLCFYATEEDSVTRKTTKRMMVNIKPKEFGSVIKQRYKDEDSKLLVHFRDLLDRIFILDPQKRITVSQALAHPFITGK", "length": 834 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1P8BFV1-1", "protein_name": "Bax inhibitor-1 family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGLKDFSRISPAIQSHLMRVYFSLFCILAASAFGAYLHMRLNIGGTITKLGWVLSLLEHVVSCPPYKHKIRFSLLLLFGVLHGASVGPCIKSTIDIDSSILITAFLGTAVIFFCFSAVAMLARRREYIYLGGLLSSGFSLLTWLKNSDQFASATVEIQMYLGLLLFVGCIVVNTQEIIEKAHCGDMDYAVHSLILYIGFVRVFLQILSIMWNTSADRIRRNNEET", "length": 226 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1W2P6Q8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7S8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKMRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLIGGLNTPLHESDFSGVTPQQQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLHINPEDGMADHSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQATRDAERVKEMKRMHKAVQKDLPRPSEVNETILRPFDVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGFATNDSEHITYLEHSPYEKFSKEDLKKAQDALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPAQSCYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLEEDVQRQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7Z8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P855-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAIMKYRKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2PP81-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 5", "gene_name": "TAF11L5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A1Y7VLT7-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1Y7VNG9-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRHRGKNENESEKRELVFKEYGQEYAQVTKMLGCLWLEAMCFDGVKRLCHIRGKLRKKVWISTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINETDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YCH8-1", "protein_name": "Predicted gene, 47985", "gene_name": "Gm47985", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGAPHNSAKRHRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPIVLQRAWLTWQLSHAGAALHWALHTVKSILTSQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YD13-1", "protein_name": "Predicted gene 8947", "gene_name": "Gm8947", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKREQLLDKKAEDKQPPESRCNNGRSSKSSPMGKENTWPSREAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDQRSQPRSPVRTLKRSRSGDRQGAPHNYAKRRRQTFPPEASCSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYIWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 301 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YE43-1", "protein_name": "Predicted gene, 47996", "gene_name": "Gm47996", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGVPHNSAKRCRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286ZIN6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258935", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANLTSMSGFLLMGFSDDHKLQILHALLFLVIYLLALTGHLLIITITTLDHHLHSPMYYFLKHLSLLDLCFISVTVPQSIANSLMNNGYISLGQCILQVFFFIALASSEVAILTVMSYDRYVATCQPLQYETIMDPWACRQAVIAVWVTGGLSGLTHTAINLSVPLCGDRVIHQFFCDVPQMLKLACSYEFINEIAVAAFTTSTAFFCLISILLSYTRIFSAVLRIPSAQGRTKVFSTCLPHLLVVTFFLSAAGFEFLRPPSDSQSAMDFMFSIFYTVVPLTLNPVIYSLRNKAMKAALRKVLSKEEFAQRKKYFKALFQL", "length": 321 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZIP8-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259124", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "QEYKANGGDNTTTIIHFVLLGFSDFPHIRPALFVVFLVIYILTLTWNLCLIVLIRLDSHLHTPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECCLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVQVLTAIFTVFFGIINALVIMMSYVYIVISVMKITSAKGRSKAFNTCASHLTAVTLFYTSGIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 316 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZLI4-1", "protein_name": "C-C motif chemokine ligand 24", "gene_name": "CCL24", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFSPSSLIKASGQLQCPAGNRLLAPTLSSCIAALSPELPLLLSRHGRPVTVAASLLFLGLCAYSFAPADSVTMPSSCCIYFISKKIPESRVASYQLSNSSVCPQAGVIFTTRKGQKFCGDPKQLWVQKYMKKLDAKRKKASTRIRAMGTGAPVRRGPANSTSI", "length": 163 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZSE3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258059", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPKLQVLIFIFLFVAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEISFISSCIPRYLYSIATGDKVITYNACVIQVCFTDLCGVTEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSVQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZU87-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100152920", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILETMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDHYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSTVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSWRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZVC9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258401", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZWC4-1", "protein_name": "Zinc finger protein 16", "gene_name": "ZNF16", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLPLSQVPAMPSLRTRPGKAEMEPSVPGPSLRTPGTQVSVSDAPAVTHPGSALHGPLSCGDTEPGATPPHHQLADWDLRTEGSQLLQKEDASEDLESQAGTSEDYVGAGSQAPERGELCADVLGSDWGVPQGERLSLCQEGGFMPAYLLPGSPLEEPEIDTEPLERNFGLIITPVASPGEPEEETPQPFDACDQSVHCGVDLAGHEGLHAAESSFICGECGESVGLHSDLLRHRLSHRGEKPHVCAECGEAFSQSASLESHQRSHEPAKPFQCSTCGKAFGRSSSLIKHHKVHTRERPHACGECGRPFSRFSNLVKHRRVHTGEKPYRCSECGKAFSQSSSLLQHRRVHTGEKPHVCPVCGKAFSYSSVLRKHQIIHTGVKPYSCSACGKAFSHSSALIQHQGVHSGDKPYECRECGKTFGRSSNLILHQRVHTGEKPYECAECGKTFSQSSTLIQHQRIHNGLKPHECDQCGKAFNRSSNLIHHQKVHTGEKPYTCVECGKGFSQSSHLIQHQIIHTGERPYKCGECGKAFSQRSVLTQHQRVHTGEKPYDCEACGKAFSQRSKLVKHQLIHARE", "length": 576 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZX75-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100156955", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "IFIMEWENQTASSDFILMGIFSHTPTHIFLFSLVLGIFTVALLANTVMVLLICLDRRLHTPMYFLLSQLSLMDLMLICTTVPKMARNYLSGRKSISVAGCETQIFFSVSLFGAECFLLAVMAYDRYAAICYPLQYPQLMNWNVCGLLAASSWILGVFDGIVDIAATLSFSYCGSREIPQFFCDITALLRLSCTDTSTFETLVFICCVVMLLFPLSLIIISYTRVIITVIRMSSGEGRHKAFTTCSSHLVVVGMYYGAAMFIYMRPTSNRSPAQDKMVSAFYTILTPMLNPLIYSLRNKDVAKAFSRCWGREI", "length": 312 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZY56-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258501", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "METDNDTQILEFLLLGFSKQPESQPIIFGLFCSMYLITVFGNLLIILAVISDYHLHIPMYFFLSKLSFVDICFTSTTIPKMLWNIQTQSKAITYEGCITQIYFLILFAVLDILLLTVMAYDRFVAICHPLHYTVIMNPRLCGLLVLVPWIMSVLNSLLQTLMMMQLSFCTNFEIPHFFCELNQMIQLACSDTFLNTIVMYFAAALLCGGPFFGILCSYSKIVSSIYRISSAQGKYKAFSTCASHLSVVSLFYCTMLGVYLSSAAAHSSHSSATASVMYTVITPMLNPFIYSLRNKDMKRALKALFVKGPM", "length": 310 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZZP6-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHLPNYH", "length": 402 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7E2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258743", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFPDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKVACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7J9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258750", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVKEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLAFVDLCYATAITPKVLQNLMSTEKSISFIGCMVQLFVYGTFVTSDGYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSCFMGFLNACVNGSLTFQLNFCKSNKINHFFCDAPPILALSCSSIYFNIMLLAAFVGFNLMFTVSIIIFSYIFILAAILKISSAAGRKKAFSTCGSHLTAVTIFHGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMLNPLIYSLRNQDVREALKEIGKKML", "length": 309 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A951-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "LOC100514137", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVHMNVLTDALESINNSEKRGKRQVLTRLCFKVIVRFLTVMMKHGTPIGKFEIMDDPRARKIVVNLTGRLNKCGVISPRFDGQLKDLEKWQNKLLPSCQFGFIVLTTSAGIMHHEEAR", "length": 118 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ACV2-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDAPTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLIKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEDSAWNKLQFYHNPNFKRGCPNLLVRMKRRVRVKNASPVSASLLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSTSTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSVRPPGQIVMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYHRISNFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSVASLSRPNPQSSSISEHHPNYY", "length": 402 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AEV7-1", "protein_name": "Uncharacterized protein", "gene_name": "WFDC10AL", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKWWGLQWLMLSCLAILPASGNWQERISASLEALTQSKLIPGMKPCKTIPTKEQCTYFCDLPRACPTGLLCCSASCGNVCMPPKGHGNRRSSHKISNFLFTAEPIKQQ", "length": 108 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AF12-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTNTKGKRRGTRSMSSSPFRKHGVVPLATYMRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRVYNVTQHAVGTVVNKQVKGTILAKRINVHIVHIKHSKRGDNFLKRVKENDQKKKEAKEKVTWVQLKHQTAPAREAHFVRTNGKEPELLEPNP", "length": 155 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AGK9-1", "protein_name": "DM domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDPDEMPTVPCCPLDSTTGLETGAPWGIEFGPRRAIRRCARCHNHGITDQIKDQEHLCLFQACECHKCVLFSEHCSILPAESALKTMQELHLKRQLTQGLIKSGTTSPKAHSHVKKSSIQTGVLSKLPRCSADRSGIGIFVSVLDSSTLEEATNNFTFQEVTQAPCPAQQAPKTSDQDSDSASLEWQRKLEAAEALLTLRESSQAPSGPTPLLQPSAAPAPAGERGLQPPSRSLRPRPASSISLPIGHVGCISLLS", "length": 256 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AKK8-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100155397", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDVRNHSIVSEFVFLGFTNSWEIQLLLFVFSFLFYSSSMMGNLVIVFTVTLDSHLHSPMYFLLANLPAIDMVFCSITAPKMIGNIFKKHKAISFCGCITQIFFTHAAGGTEMVLLIAMAFDRYVAKCRPHHYLTIINPRICLCFLVTSWIIGLIHSMAQLFFVVDLPFCDLNVLDSFYCDLPRLLRLACTDTQELQFMVTVNSGLLSMGSFVLLIISYIFILFTIWKHASGGSSKALSTLSAHITMVVLYFGPLIFFYTWPSPTSHLDKYLAIFDAFITPFLNPVIYTLRNKEMKVAMRRLFSHLVHYRNIS", "length": 312 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AP00-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258730", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "SRHDLHCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLTGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCDHLAMVSWGVGCMAALGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSMPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTVVTSMLNPIIYSLRNKDVKAALRRTLGKKKVLAHR", "length": 322 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ARD5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258934", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLFYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AT12-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLSFNRTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQFFIIHCIFMSESGILLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIFLRSYCTVFPIIFLLKRLTFCRNNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDILLIFVSYMLILRAVFHMPSQDARHKALSTCGSHVCIIILFYGPGILTTLAQRFGRHIPAHIHILLANVCVLAPPMLNPIIYGIKTKQIQEQVAHLFLKQK", "length": 313 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AUC4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MERINKSHPEEFILLGFADRPWLELPLFIILPMYFFLTNLSFLDMCYTTSIVPQMLFHLGGSEKTISYLGCAVQLYFFHTMGGTECLLLALMSFDHYVAICKPLHYTLIMNRCTCILLVATVWLSGMTYAVSEATVTLHLPLCGHNTLDHLICEIPVLIKAPCGEKGTNELTLSVVCIFMLAVPLCFILASYASIGHAVFKIKSSEGRKKAFGTCSSHLIVVFFFYGPDISMYLQPPSSISRDLPKFMALFHGVVTPTLNPFIYTLRNKDVKGAWGNLVRSVFTSK", "length": 286 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AXC2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVNEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEMLQNFVGTEQSISFIGCMVQLLIYGAFVTSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSYLIGFLNASVHVSFILPLNFCKSNKINHFFCDAPPILALSCSSIYFNVMLLAAFVGFNLTCTVLVVIFSYIFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 281 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AY25-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100155405", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLSNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSRRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDRFFCNLPLVIELACMDTYKVEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRLSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNHHVNSWKY", "length": 311 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B1Z6-1", "protein_name": "Short stature homeobox", "gene_name": "SHOX", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEELTAFVSKSFDQKSKESSGGGGGGGGKKDSITYREVLESGLARSRELGGSDSNLQDITEGSGHCPVHLFKDHVDNDKDKLKEFGTGRAAEGIYDCKDKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTASHLDACRVAPYVNMGALRMPFQQVQAQLQLEGVAHAHPHLHPHLAAHAPYLMFPPPPFGLPIASLAESASAAAVVAAAAKSNSKNSSIADLRLKARKHAEALGL", "length": 292 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B9C9-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWRSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTECPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHHPNYH", "length": 402 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BB76-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100157512", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLGNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSHRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDSFFCDLPLVIELACMDTYKIEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRHSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNRHVNSWKY", "length": 311 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BC21-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152520", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYVAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BF45-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100513333", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPELQVLIFIFLFLAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEVSFISSCIPRYLYSIATGDKIITYNACFIQVCFTDLCGITEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSDQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BGE2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENNQSWIAEFILVGFQLSEEMELFFFIIFFLLYIFNLLANGMILGLICLDPRLHSPMYYFLTHLAVTDISYASSNLPNMLENLVKHKKTIPFVSCTLQMLFYLAFASVECLILVVMSYDRYVAICHPLQYTVIMNWKLCTVLAIISWACGFFLALVQVSLFLRLPFCGPQKVNHFFCEIRSVLKVTCGETWINKIFLFADGVFILVTPISLMLVSYVRILWAILKIQSKEGRKKAFSTCSSHLCVVGFYFGIAMMVYLVPDDSHQQEEQQKILFLFYTFFNPLLNPLVYSLRNAQVKAAFHRIFQKNRTM", "length": 311 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BIM6-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGKRSRRKSPGRQGRTCARTTRAGLSASVSHMERLLREGPYAQCLSSSARVFLAATIEYLTARVLELAGDEAQIVGRRCITPELVAMAVHNNALLSAFFGTLAISQVAPTQE", "length": 113 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BK27-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVTEFIFLGLSNSQELQTFLFVFFLVFYVGIVFGNLLIVLTVMIADFFRKCKVISFKGCLAQIFLLHFFGGSELVILIAMAFDRYVAICKPLRYTTIMSSNVCVGIVAAAWGTGFLHSVSQLAFAVNLTFCGPNEVDSFYCDLPRVIKLSCTDTYRLDIMVIANSGVLTVCSFVLLIISYTVILVTIQHLPSQKSSKALSTLTAHITVVLLFFGPCIFIYAWPFPIKSLDKFLAVFYSVVTPLLNPIIYTLRNKDMKTAMKRLRKWNMNSRIKP", "length": 274 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKA6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259008", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTFNCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLMGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCVHLAMVSWGVGCMVGLGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSIPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTMVTSMLNPIIYSLRNKEVKVALRRTVGKKKVLAHR", "length": 320 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKW4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258932", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILVTMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSTIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSLRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BLZ6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258167", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGGKNSTTITKFILLGFSEFPKLTAVLFSVFLRISLMTVSWNMGLIMLIRMDSHLHTPMYFFLSNLSLLDICYVSTIAPRMLSDFFKKYKFISFMGCTMQYFFSSLALTECCLLAAMAYDHYAAICNPLLYTAIMSPTLCVQMVAGSCVTGFFGSFIQLCALFQLHFCGQNVTNHFFCDLPQLLILSCSDTFFFQVMTSVLTVIFGLTSVLVIIISYGYIIATILKITSSEGRSKAFNTRASHLTAVTLFFGSGIFIYMYPNSGDSLSQNKLVSVLYTVIISMLDPLIYSLRNKEIQDSLSRWRKTIFSWCY", "length": 313 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BNL4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "TVLNARNVSTPKVFILLGFSDHPWLEMPLFIIVLAAYIRTLVGNISIIVVSRVDPNLDSPMYFFLSNLSFLDLCFTTTTIPQLLLNLWGPDKSISYGGCVTQFYMFHFWGATECIFLAVMSMDLQAICKPLRYPVIMHQQLCIFLVVMAWLSGLVNSLLQSSLTIQLPLCGNNKVDDFLCEVPVMIKMSCTDTTFNVAMLSIVGTFYSLVPLSLILVSYGFIVATVLRIQSSEGKKKAFNTCSSHTIAVSLFYGPVISMYVQPSAANSQDKNKLMSLFYSLVTPMLNPFIYTLRNKDMKGAMMRLLVSLYHQRRG", "length": 315 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BSD4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100525471", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENENSTVVAEFIFVGLTQSRNIQLLVFVLILIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNLRACYALLVALWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLMTLLCFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPAIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKRLLNQQLA", "length": 307 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A2R8VHJ9-1", "protein_name": "Predicted gene, 36245", "gene_name": "Gm36245", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSTKNEEQNEDQSEGVVIPHIQDHHCLAILAFCFFFPLGYLAYRSSCKTRTYIEQKEYEKAKATSRCTFAFVLSSIAGGSIIFFCLFSRLFFM", "length": 93 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A3L7ICH5-1", "protein_name": "Cytochrome c oxidase subunit 7A2-like, mitochondrial", "gene_name": "LOC100756118", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYYKFSGFTHKLAGAWALESYSPQGLKPVASTEAPPIVFATPTKLTSSVTAYVYAGKNKVPELQKFFQNFFHLKRGLPDQMLYRTPMALTVGGTIYCLSALYMASQTPNK", "length": 110 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A3Q1LL21-1", "protein_name": "BTB domain-containing protein", "gene_name": "LOC112445444", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGPLNSRNLQCRESGTGELQQPEAQAGPSYVSGSRKRKQSTGPSLGPESEMSHNQEEDLQQVVCTRQGKKVKIKSEYAYQTLFLNGETSDIKIRALGKVWCLHKRFLCQSDYFATMFRDSGKECHKDIIDLEINDQNINVESLQFVLGSLYRNEYVLIKPLQVPRVLATACLLQVEDLIQQCDKTMKETINVKTVCSFYVAAETYGLHSVKTGCFEWLLHNLMTHPSVELYKKLSTDLMNLVISSSNLFVMQKEIDIYTTLKQWMFLRLNPGWKGTMKQLLVNANNWFSRHKEHDGSISFLETKQGIVFQPVFKNLRFQHIICDLASTKVIEQDALIPSEWLSCVYKRQWYTLLRAQQYREIGPRDITETELEEYSMRCGKRIVRDGTYAWKWSGYNFGVHLYVVFTSHFIIFKRHAFSQPYDGSICLQPQRNIAFRLTLVYFGSSGKLSFRKTTGYKILTFEKDEEQMVMKLDSVALSFPLYIFCNFLFISLENPGN", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LLV6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIIIGTLITGYMVTCTCFLHYSCDSEEAHKATKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LUU6-1", "protein_name": "Guanylyl cyclase domain containing 1", "gene_name": "GUCD1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTGPRCRRKQRPSGRPGPRGTRAPQHPTPDAGWTARRAAGAAGAEARGRDLPPQRKPAKPTAPGKGRPERGECPRRADRGGGDPEERAGGRPAWGPGAGRGGAWGRSRLPPLLPPGRWCWRPGKPARAGRALSSPVDARAAAGAGPGPWEPRAARVMRTEVDAEAAGPPLEPDEPTQSLSIQDQETAFLLEDSCQLKPGQPLPGRPWPSGDFVQLPVPIIQQLYHWDCGLACSRMVLRYLGQLDDAEFEQALQELRLTRSIWTIDLAYLMRRFGVRHRFCTQTLGVDKGYRSQSFYRKHFDTEETRVNQLFAQAKTCKVLVEKCRVSVQDIQAHLAQGHVAIVLVNSGVLRCDLCSSPPKYCCFTPSGPRCFCRSPDYQGHFIVLRGYSRAAGCVFYNNPAYADRMCSASISNFEEARTSYGTDEDILFVYADS", "length": 434 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1M0W3-1", "protein_name": "IF rod domain-containing protein", "gene_name": "LOC787600", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTCGSACFSSRSGVRSSSSCVTTQRYAPGRTFSCVSACGPRPSRCCITAAPYRGVSCYRGLTGGFSSRSVCGGSRAGSSSRSFGYRSGGPSPPCITSVSVNQSLLKPLNLEIDPNAQRIKHQEKEQIKSLNSKFAAFIDKVCFLEQQNKLLETKWKFYQNQRCCESNLEPLFNGYIETLRREAERVEADTGRLASELNSLQEVLQGYKKKYEEEVALKTTAENEFVKIKQEVNRAYVLKGDLEANAHSLVEEVGFLKTLYEEELRVMQAHISDTSVVVKMDNSRYLNMDSIVAEIKAHYDEIASRSRAEAESWYRSKYEEIKATVIRHGETLRRTKEEINELNRLIQRLTAEIENAKSQNSKLEAAVTQAEQQGEAALNDARGKLAGLEKTLQKAKQDMACLLKEYQEVMSAKLGLDIEIATYRRLLEGEEQRLCEGISAVNVRVSSSRGGVVCGDLSATRTCGIGSYGVGACGSSCKKC", "length": 480 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MFB0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112441459", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELWRRLLIIVIGTLITGYMVTCTCLLHYSCDSEEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKSTWPPSLQCRVKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVTLFSRELKHFYKSYKKKQPIYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDMFKNSQNN", "length": 361 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MI36-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGSSSGSKAEFIVGGKYKLVRKIRSGSFGDMYLAINITNGEEVAVKLESQKARHPQLLYESKLCKILQGEVGIPHIRWYGQQKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMMGRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASISAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRHLFHILFRTLNHQYDYTSDWTMLKQKAAQQAASSSGQGQQAQTPTGF", "length": 325 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MQ28-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "KEQVLQPTTVVSLEGAVAEISCNHSVSDVYDFFWYLHFPGFAPRLLIKGLGPSQQGRYNMTYERFSSSLLILQVQTADAGVYYCALRYTEAGHP", "length": 94 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MT47-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112444909", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLGCEGGKRPLKPPKKQAKETDEEGKAFKHKQKEEQKTLEGLKGQIMGKVPLATGGIKESGKQ", "length": 63 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MUP8-1", "protein_name": "E3 ubiquitin-protein ligase", "gene_name": "LOC100336539", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSRLTERALPTGTSNGAPSSRRAPVLTGTTVSNNDLASLFECPVCFEYVLPPITQCKSGHLVCGNCRPKLTRCPTCRVPLTSIRNLAMEKVANLVLFPCKYTSSGCGKTMPPTEKADHEEHCEFRPCRCPCPGTSCGWQGSMDAVVPHLMQHYNESIITLRGEVVVFLAVNINLAGTLEWVMLQSCFGFHFLLVLEKLEIYDGHQKFFAVVQLIGTREQAENFTYQLELNGNRRRLSWEATPLSIHEGIATALINSDCLIFDSEVAELFAENGNLSIDVTISMC", "length": 284 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q2TUK0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC121109925", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDEKGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A3Q2UEY0-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418381", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSSYTIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A494C0N9-1", "protein_name": "Protein FAM246B", "gene_name": "FAM246B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATPGRPWAQARSAYRASEVLRRVTGRRRDPGPQSNGPGREDARAPGRLARLLRQLRAEAASRSEVPRLLKLVERAGAGAAGAGERTGAHSRGSVCSVCGEPRGRATYPAGVLEVSERRLQEGLAAVREELGAEIEALRAELRAELDALRALLPPPPPSPPARREPRAVPRAAPRGPTLLRTLGTVSALVAASRPADDAPDGPAECGAHRAPARKNHKKMPVPPGAPQGGGD", "length": 232 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A494C0Z2-1", "protein_name": "Speedy protein E13", "gene_name": "SPDYE13", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A4X1TRA8-1", "protein_name": "Small ribosomal subunit protein eS19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGVTVKDVNQQEVVRALAAFLRKSGKLKVPEWVDTVKLVKHKELAPYDENWFYTRAASTPRHLYLWGIAGVGSMTKTYRGHQRDRVMPSHFSRGSKSVAHRLLQAREGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAAKKKH", "length": 145 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1TY10-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100627324", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENYNQTSIYFILLGLFPSSRIGMFLFIIIVLIFLIALFGNFSMILLIFLDNNLHTPMYFLLSQLSLMDLTYISTIVPKMAYNFLFNDKSISFIGCGIQSFFFLTLAGAEGLLLAAMAYDRFVAICFPLHYHIRVSKRICVLMIIGSWIMGSINSFAHTAYALNIPYCQSRAINHFFCDVPAMLTLACIDTWVYESTVFVSTTIFLLVPFTCIAFSYGRILLVVHHMNSTEGKKKAYSTCSTHLTVITLYSAPFAYTYLRPKFLRTPTEDKVLAMLYTIFTPMLNPIIYSLRNKEVMGALRRVIQRICSVKM", "length": 312 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1U699-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSVSMSKFVLVGLHIWPEQQGMVFALFLGMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLAFSDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFFSCIDNLLLAVMAYDRYVAICHPLRYAIIMKEELCLCLLAGSWLLSCAYALTHTLLLAQLSFCADNIIPHFFCDLASLIKLSCSDTSLNELVIFSLGPAVFIFPLSGILVSYGCIVVSILSVHSPKGIFKALSTCGSHLSVVSLFYGTSMAVYLSSSSGQSHDKDTIASIMYTVVTPLLNPFIYSLRNRDMTLALQILFRNSNLLAK", "length": 315 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1VK25-1", "protein_name": "Elongin-C", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RSYGGCEGPDASYGKLIASDKFIVKREHVLTSGAIKAMFSSPGQFAEKETDVVNFRETPSGIPSAALWKVCMYLPHKVCYTSNTSEIPEFPINSEFPIAPDIALEPLMAANLLDC", "length": 115 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A571BD55-1", "protein_name": "BTB domain containing 35, family member 26", "gene_name": "Btbd35f26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BF50-1", "protein_name": "WD repeat domain 88", "gene_name": "Wdr88", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTKDNEEILNSPDQVRKGSPDVKKKKKIKKKRVKPKGDLDSKKLDFVEDSWWKGSLKNKNLDFAEYNWVLVDNRRVSVDSRKSSADSKRGSADSKRGSADSKRGSADSKRGSADSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKNRFSPKKMDFSEDREISQPTFLRAQQSKVPWALMRALGLFKLSLPDIRRYYNLTSHDPLALDKDRQPREKSHMATVKKFWGNQQPLSKIPYKILIGHDHIVSSCHFCMNDTRFLSSSYDCSVKLWDAEDGTVIWDFEPRPKAPVLECSITADNRRIVASSYDKTVRAWDVETGQLLWKVRHDTFVVCCKFSPNGKFVLSALDVDRGIYLMDPENITTVIHMKDHHQRSITSCCFDPDSQKVASVSMDRCIKIWDITSRTTLFTIPKAHYNAISDCCFTSTGHFLCTSSWDKNIKIWNVHTGEFRNRGACVTLMKGHEGCVSSCCIARDSSFLISGGFDKTVAIWDVGGGYRKLALKGHEDWVTDVAISNNKKWILSASKDSSMRLWNIEEIDKIPLVSENKKAMGLKVRQVGIR", "length": 565 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG45-1", "protein_name": "BTB domain containing 35, family member 25", "gene_name": "Btbd35f25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGLQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG86-1", "protein_name": "BTB domain containing 35, family member 8", "gene_name": "Btbd35f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESRHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A5G2QG78-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100523228", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTRGENTTNITDFVLLGFSDFPQIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHTPMYFFLRNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECGLMTVMAYDRYAAICNPLLYSSTMSPSLCGRMVLGSYMAGLSASLSQVCAMLQLHFCGPNVIHHFFCDMPQLLVLSCSDTFFLQLLTLVLTVIFGILNALVIMMSYVYIVISVMKITSTKGWSKAFNTCASHLTAVTLFYTSIIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDAWKRLKKRKECC", "length": 312 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QIN7-1", "protein_name": "ADAM metallopeptidase domain 7", "gene_name": "ADAM7", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSNSHYLSALFSREFLASNYSETYYSTKGEEVTTHPQIMDHCFYQGSIIHEFDSAASISTCSGLRGFFRVNDQRYLIEPVKYSDEGEHLVFRYNPKVQHAANYSCTELNFTRTAVLKDNTKSMEDSKMESIEKEKHIELFIVADNNVYHRNPNSKVRNRVWGMVNFVNMIYKTLDIHVTLVGLETWTNGDKIEIDSNIETTLKRFSAWQEIILKKKKNFDHVVLLSGKWLYTSAQGTSYPGGMCLPYYSSSVVKDLLPDLNTIASRMAHQLGHSLGMKHDDYPCTCTLGKCVMDSGGSIPALKFSKCSRTQYQQYLKDFKPTCMFDIPFSDKLSDYPYCGNKKLDDGEECDCGPVQECTNPCCDARKCMLKPEFTCAEGECCESCQVKKAGSLCRPAKDECDFPETCTGHSPACPKDQFQVNGFPCKDAKGYCFMGNCPTRDDQCSELFDNEAKDSSDICYKMNKNGNKFGYCKNEEQTLIPCEEKDVKCGKIFCTGGKHASILGEEKVYHLKKPLTQNVTECKTFFLYHKSKDFGLVAPGTKCGEGKVCSNSECVTIEKAYNSTDCPSPCNENAVEDGDLGCQCEGVQASVDWEETLNVTNISILVVVLILVIIGVLSAVLLIRYQKCIKLKQVQRPPSEALGVENKGYTGDEQQTRTEPILPDIHPLHRRTAESLARLPTSFSSPHYITLKPASKEPRGTADPNPSAKVSLKLDIQNGCASLS", "length": 725 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QUE5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524011", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSNVSKFLLLGLPIQQEQQGMFFALFLGVYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFASVTVPKMLMNMQAQDHSISYAGCVTQTYFFMFFACIDNLLLTVMAYDRYVAICHPLRYTIIMREELCICLLAGCWLLSCAYALTHTLLLAQLSFCVDNIIPNFFCDLAALLQLSCSDTSLNELVIYTSGAAVFIFPPSGILVSYGRIGISILRVPSTKGICKALSTCGSHLSVVSLFYGTIMALYFSPSFGQSHYKGIIASVMYTVVTPMLNPFIYSLRNRDMTLALEILIRNKNLFTT", "length": 313 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QWK6-1", "protein_name": "Calmodulin 3", "gene_name": "CALM3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VSAEREEEGVALKFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVTASPVLGPAREGPRASAPSWGGKQPLAIACNQPRRSSGFSWDLPSFENLLSSTLWSPASGDGRGVEHSGRPS", "length": 214 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2R7Y6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524140", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLVAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINHLSGTKSISFVGCATQYFLFLSLGGAECLLLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIVLISASYVFILHSVIHMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2RGH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524855", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGRRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYTVLMNRKVGQMMAVTSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYETAVYISDIVLLLLPIILISASYIFILHSVIRMHSAGSKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALRRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A668KLA6-1", "protein_name": "Predicted gene, 52955", "gene_name": "Gm52955", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMGALLANSPLLLCWLVFGAQLSVGEGILLTLTLMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKQCGVFFFALNLALFGIFAFAQCFNPLVYGLHNRDLQSKLYPSLCCQKKLLP", "length": 296 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KLA7-1", "protein_name": "Predicted gene 7582", "gene_name": "Gm7582", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMWALLANSPLLLCWLVFGAQLSVGEGILLTLTFMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKRCGVFFFALNLALFGIFAFAQCFNPLFYGLHNRDVQSKLYPFLCCRKKLLP", "length": 296 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KM50-1", "protein_name": "RIKEN cDNA A930007A09 gene", "gene_name": "A930007A09Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSLSELPQKNTDLAEMQSGPLGRCSHFFWLGVAFDAVGVAVLFTGVFANLLFYDMLLYLGSIIIFVSLLWWISWYTGNIEALPEDPLRGTSPRESGVHRSGSRRFSLTLRSVSDTFQRIRRRRRRRLHPRVVQRISSISSTDPGQLERNCDARTSGGRALFRSAKPEAVLNQFSRVQTSKSLPLGIVHTGLSICTSRSQPVFSVTSQTYPLASDSNSQMAMSSDSHVYLDSHSQEHSKISVASQIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASQIYPLEQEESQSHFLVPMPSDSFPVVPMTSQSQIQGSLAQQSHLQNLPLASQTPETDKASKSHTLAKGVPGVPPGSAQTQHPQASLAQTSQISSPVRKVPKN", "length": 636 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A8C2LDI6-1", "protein_name": "Large ribosomal subunit protein eL33", "gene_name": "LOC100774916", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRLWCKAIFAGYKRGLCKQRGHTALLKIEGVYARAETEFYLGKRYAYVYKEKNNTVTLRCKPNKARVIWGKVTKAHGNSGMVHAKFRSNLPAKVIGHRIRVVLYPSRI", "length": 110 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LMV8-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC100755948", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTNTEGKRRGTRYMFSRPFRKSEVVPLAMYMRIYKKGDIVDIKGMDTVQKGMPHKCYHGKTGRVYNVTKHAVGIIVNKQVKGKILAKRINVQMKHIKHSKSRDSFLKQVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPQLLEPISYEFMA", "length": 160 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LSR6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "LOC100751955", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSQDEGEKENPMWELHICKLCLSICVEESRDRLTRAAKVLEQLKGETPVFSKARYTMRSFGIRSNEKIAVQCTVHGTKTEEILEKGLKVQEYELWRNNFTDTGNFGFEIQEHIDLAIKYDPSIRIHGLDFYVVLGRPGFTIADKHRTGCIGAKHRISKEEAMRWFQHKYDGIILPGK", "length": 177 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LUM6-1", "protein_name": "Tubulin alpha-1C chain-like", "gene_name": "LOC100757824", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MCECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETDTGKHIPRVVFVDLEPTAIDEVRTGTYRQLFHPEQLITGNEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSRFTSLLMEWLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYPTPLPE", "length": 288 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LZU4-1", "protein_name": "Glia maturation factor", "gene_name": "Gmfg", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSDSLAVCEVDPELKEKLRKFRFRKETDNAAIIMKVDKARQMVVLEEEIQNVSPEELRLELPERQPRFVIYSYKYLHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRATDDLTEAWLQEKLAFFG", "length": 142 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2M625-1", "protein_name": "U3 small nucleolar RNA-associated protein 15 homolog", "gene_name": "LOC100755487", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAGYKPVAIQTYPVLGEKITQDTLYWNNYKTPVQIKEFGAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEIQTFREHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNKNVLCVEHGQPVESVLLFPSGGLLVSSGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAASILSLALSHEDETIVVGMTNGILSVKHRKSEAKKESLSRRRRPAYRTFVKGKIYMKQRDDIMINRPAKKHLEWYDKDLKSFRISKALDRVLEPNCVIKTPEVTVSIIKELNRRGVLANALAGRDEKEITRVLNFLIRNLSQPRFAPVLINAAEIVIDIYLPVIGQSPVVDKKFIVLQGLVEKEIDYQRELLETLGMMDMLFATMSRNDSVSLSENVPAELPEKTESPCQPGDTDKNS", "length": 527 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2MXE3-1", "protein_name": "Glycerol-3-phosphate acyltransferase 1, mitochondrial", "gene_name": "Gpam", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDESSVTLGTIDVSYLPNSSEYSLGRCKHATEDWGDCGFKTTFFRSATLKWKESLMSRKRPFVGRCCYSCTPQSWERFFNPSIPSLGLRNVIYINETHTRHRGWLARRLSYILFVQERDVHKGMFATSVTENVLNSSRVQEAIAEVAAEMNPDGSAQQQSKAIQKVKKKARKILQEMVATVSPGMIRLTGWVLLKLFNSFFWNIQIHKGQLEMVKAATETNLPLLFLPVHRSHIDYLLLTFILFCHNIKAPYIASGNNLNIPIFSTLIHKLGGFFIRRRLDETPDGRKDVLYRALLHGHVVELLRQQQFLEIFLEGTRSRSGKTSCARAGLLSVVVDTLSSNTIPDILVIPVGISYDRIIEGHYNGEQLGKPKKNESLWSVARGVIRMLRKNYGYVRVDFAQPFSLKEYLESQSQKPTSAPLSLEQALLPAILPARPNDAAESEDTSSNEPRNTADEAFRRRLIANLGEHILFTASKSCAIMSTHIVACLLLYRHRQGIHLSTLVEDFFVMKEEVLARDFDLGFSGNSEDVVMHAIQLLGNCVTITHTSRKDEFFITPSTTVPSVFELNFYSNGVLHVFIMEAIIACSLYAVLNKRGSGASAGGPGSFISQEQLVRKAASLCYLLSNEGTISLPCQTFHQVCHETVGKFIQYGVLTVAEQDDQEDVSPGLAEQHWDKKLPEPLNWRSDEEDEDSDFGEEQRDCYLKVSQSKEHQQFITFLQRLLGPLLEAYSSAAIFVHNFSGPVPETEYLQKLHRYLITRTERNVAVYAESATYCLVKNAVKMFKDIGVFKETKRKRVSVLELSGTFLPQCNRQKLLEYILSFVVL", "length": 827 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8D1BQI2-1", "protein_name": "Uncharacterized protein", "gene_name": "LCE5A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSCQQNQQQCQPPPKSLPKYSTPKFPGPCPPLVSSCCGSRSGHGRCYSSGGGGCCLSHHRRRRYHPCQPQSSNCCDSGGGQQSGGSGCSHSSGGSGCCSGGCC", "length": 103 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8D1VKI8-1", "protein_name": "Uncharacterized protein", "gene_name": "NCR3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARMLLLILIRVHSGSCALWVSQPPEICTQEGTPAFLPVPSTPARGDWPLALSHGTGTNWPQGRRVVVLGQGVRTGNGTPLVVERGPAQLATPTIFLLRAGFYAFGFLSVAIGSTIYYQGKCHRHMGTHCRSADGL", "length": 136 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8I5XVN6-1", "protein_name": "SPATA31 domain-containing protein", "gene_name": "LOC689526", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MESFLLLMNSAIESWMNTSTMDIATDLSIAILCGVGLFFLLIPFLKDCPLSPASGNKTDIPKDVKRGRSNTRRKTDVEKGCRDGGKTVEETKTPSQPMKILTRQLLQDSTPQIFWNSSQKLDHLLLSQLFSSLTSLEDLILQKFNRRFWGTSSIFSESVVAMAHVLRNPSFPQQKSVRFSDPCVTDQAPSQAQGLRQQHRYHPRLHRQRKTSLVGMTWVPEKKILPISTPKQIHPCLKRRAYGVSCPTTEKGIQTSLPPECLSHKHGLYSKAVKGYVKRNHQKAIGKPPGNWLRDTLKTKAIRPASILSEHLRMFLHHKEPQTKDKATNVEKQQGTCIRSPPSKKLKQFQGRFPPNTDHYCKRRPQLSQPGQPSILNSKSYKLRKIIQSVLAGMTLMKDRADFSMQSQFSQAPQSSVCNAKRYKYSKRMGSVPRRVPLKKDTARYDMGKPIKKCLGAGTKNVPHSACSILGKRLRARNLALKKGQASVMNPTGNYCLHDSKAEMKLASNNTALPVQCRRTPYLQILEALNPIPPGVLASKLPRIVFPSSPICDFKEEYYSKAATVLKNLHHQDPGGTRVKSTSAASLESALSMCSAAKIQKTQRAPPPAASRGLSKAHTDLLKRHLSIQHSALYFEQGRIIQGTGKGSLQQNTNPQKAKHAPLKSFHEGDSRHHSWNGTMVGPGKRVPPAAAKQTKAVEVKKETPYAWSLGSNESHTGKDINISPRVFGSLGAKRSPGHLQTCTPQHSQDSTLRTQGHRNIILCSNKQPQPRPGRHDPECPSTVHPAKVNLSSEHSMSSFQNTCQKPKTAQGSCERADTKENRVLKDKIRINHLKDLCPHKERQGSIRPTAISQGGRLGRSRPCSLSSTQLKDTAKTRTSDKRQATSKSSWKSDIREVLKYGYVGSKDIIGQEDTSKKDQPPAVTERTEEDWTGEKAMCNMIAHLQYLTNFLFEIMEDTEWDPSKLQGCEVESLTFQLGSSSDSSEGDDDINQGTSTSTMSFGQTSPEMHNCSFTKTGIGDKTQSEIKAKTACDQHLNQVNRGMFSDQLPMPKEYDLSCRYRGIQHQQELGLPDQTFYQYKLRMTHCPHGGTKGHNYSFGYRKLGDQQQPDFTHKALDPHQSAKEDMGCVSCLSPKGSRPVKHRRTDCFSP", "length": 1151 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5XWP3-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "ENSRNOG00000063695", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQRDMCHMTPYRLLCVLVALALSGCNVAQEVTQVQSTASRQEGEEVTLDCSYETSYVAYYLSWYKQHLSGDIIFLIHQISSSTAEERSGRYSLVFQKSLKSISLVISASQPEDSGKYFCALSDLTQC", "length": 127 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y4M0-1", "protein_name": "Large ribosomal subunit protein uL14", "gene_name": "LOC108350588", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQRRGGSSGAKFRISLGLQVGAVINRADSTGTKNVYIISVKEIKGRLDRLPAAGVGHMVMATVQKSRPQLRKKVHPAMVIRQQKSCGRKDGVSLYFEEDAEVIVNNKGKMKGSAITGPIAKEHADSWPRIASNAGSTA", "length": 140 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y5C9-1", "protein_name": "Ribosomal protein L32 like 2", "gene_name": "Rpl32l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALRPLMKPKIIQKRTKKFIRHQSDRYVKIKRNWRKPRGINNRVRRRFKGQILVPNIGYGNNKKTKHMLPSCFRKFLVHNVKELEVLLMCSKSYCAEIAHNVSSKNRKAILERAAQLAIRVTNPNDRLCSKENE", "length": 135 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y6V7-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "Pate4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNTEPLFDIVINCPIAPQFILKILLFPYPANTNLICNTCNRSENSECKNGTGQCTAPEGGSCSTISIYHGQRHVLSKQMCLGHCEEKPHYNGDFMIYVMCCSKNLCNSF", "length": 110 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y7P1-1", "protein_name": "Heterogeneous nuclear ribonucleoproteins A2/B1", "gene_name": "ENSRNOG00000069815", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEREKEQFCKLFLGGLSFETTGESLRNYYERWGKLTDCVVMRDPASKRSRGFGFVTFSSMARPHSIDGRVVEPKRAVAREESGDPGAHVTVKKLFVVGIKEDTEVHHFRDYFEEYGKIDTTEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSGQEMQKAQSSRSGRGGNFGFGNSRDGGGNFGPGQGSNFRRGSGGWESSDGYGSGRGFGDGYNGYGGGTGGGNFGGSPGYGEGRGGYGGGGPGYGNQDGSYRGGYDNYGGGNYGKGNYNDFGNHNQQPSNCGPMKSGNFGGSRNMGGPRDEHRSFPSWKGYNGVFGKQSPLTWIKTHSL", "length": 347 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZKP8-1", "protein_name": "Glycerol-3-phosphate dehydrogenase [NAD(+)]", "gene_name": "Gpd1l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGATTLRVCIVGFWSWGSAIAKIIGTNVKNQQKFASTVKMWVSEEAVNGRKLTDIINHYHENVKYLPGHKLPENVVAVANLSEAVQDADLLVFTTPHQFIHKICNEITGRVPKKALGIIHMESIDEGPRGLMLISDIIREKIGMDVSVLMGANTAREVAAGEFCETTIGSKVIQNGILFKELLQTSNFCITVVDDADAVELCGALKHIVAMGTNFCNGLHCGNNSKAAVLRLGLVEMITFTRIFCKSQVSTTTFLESCGFANPITICYRGSDCKEAKTFPRIGKTMGNLQKEVLNGQTLQGLKTSALVYQFLKQKGLLAKFPLFVTVYRICYEGRPSTEILTCLQNHPAHM", "length": 351 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZL63-1", "protein_name": "Ankyrin repeat domain 13a", "gene_name": "Ankrd13a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSDQSRKAAAEGGSSPMVWSRPARAPPGGRADGRGPIVERTTGEGRAGDESRRARTVGFVRGDLGLPKGPAVPQNGGGRVSRRGGLVGRHGAGLGPFRKSGPPPRSVMERLAYFPVRGGSAGSSRFASCQRGRERAGRGVGAAERVPEPVPSPARDPGPPAPPAPDSEALVVRCARHLAARRSPPLALRPVGRAPETPSGGSRLVAGGRSGLGGDLLAMSSARDTSSRFPLHLLVWNNDYRQLEKELRDQNAEALDPRGRTLLHLAVSLGHLESARVLLRHKADVTKENGQGWTVLHEAVSTGDPEMVYTVLQHRDYHNTSMALEGVPELLHKILEAPDFYVQMKWEFTSWVPLVSRICPNDVCRIWKSGAKLRVDITLLGFENMSWIRGRRSLIFKGGDNWAELMEVNHDDRVVTTEHFDLSQEMERLTLDLMKPKSREVERRLTSPVINTSLDTKNVAFERTKSGFWGWRTDKAEVVNGYEAKVYSVNNVSVITKIRTEHLTEEEKKRYKEDRNPLESLLGTVEHQFGAQGQDLTTECATVNNPTAITPDEYFDEDFDLKDRDIGRPKELTIRTQKFKATLWMCEEFPLSLVEQVIPIIDLMARTSAHFARLRDFIKLDFPPGFPVKIEIPLFHVLNARITFGNVNGCSTAEERQSVEGTQAECAASDATNFEVDQSVFEIPESYHVQDNGRNVHLQDEDYEIMQFAIQQSLLESSRSQDLSGPASNGGVSHAHSYEAQYERAIQESLLTNMEGRCPGGLSDSSRFDSDLRLAMELSAKELAEQELRLQEEEAELQQVLQLSLTEK", "length": 809 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZP24-1", "protein_name": "Large ribosomal subunit protein uL30", "gene_name": "ENSRNOG00000064315", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAVPEKEKKVAAVPGTLKKKKVPAVPETLKKKRRNFSELKVRRLRKKFALKTLRKARRKLICEKAKHYHKECRQMYLTEIRMARMARKAGNVYVSAEPTLAFVIRIRGISGVSPKVREVLQLLRLRQILNGTFVKLSKASVKMLRIVEPYIAWGYPNLKSVNELIYKRGYGKIRKKRIALTDNSLMARSLGKFGIICMEDLIHEIYTVGKHFKEANNFLWPLKLSSPRGGMKKKTTHFVEGGDAGNRETR", "length": 251 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZPV0-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ENSRNOG00000066253", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIVQRIFRLSSVLPSAVSVHLRSNPGVTAVAFNKEPDPVQKLFVDKIREYKTKRQVSGGPVDTGPEYHQDLDREPFKLKQLYGKGEMDKFPTFKFEDPKFVVIDKPQS", "length": 108 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZRI3-1", "protein_name": "Natural killer cell cytotoxicity receptor 3 ligand 1", "gene_name": "Ncr3lg1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASQSCQRGPENAHMHPKGPCCSALCFLCSLGSSPHGSSLGPLRKCGRRSKPVQSSPEGSRVAEWPDGLLSLLLLLWSLLPSAGGLELEMAGTTQIVFLHEDVTIPCKILGSLHLDLSIVGVIWSLKKDGDESEVFKFYGDQLEAVRPGANVSLLGLEHGDASLYLPRFELWEAGEYQCKVVVTPEKKEGTTRLEVVAHPNMSLSEKPATARGGKEKLIICQLDGFYPEALDIKWMGSALKDSHFQEITEGVVTGPTVKNDDGTFSVTSSLALKPALEDHMYQCVVWHRSWLMPQSLNVTVFENTRDSTHGTVPPTAEVGPPVSEPRSVMIYVTIIGLCILLFSVIVCGLWKWKRLTTSNTGLCLRLDVRC", "length": 371 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZS91-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134482834", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPTETEEELPTPTPKPSISEEGNFHSQYQVLGTSGQGGNGKVLLAHNRLTGTPVAVKVLRKDKQWFQPAMMEANIMRKINHPNIVSLIQVIEKETRIYLIMELVEGQELYQYIRESGHIEEDEARQIFEQILSAVSYCHGKGIVHRDLKLDNIMIDKNKKVKVIDFGLSTQFPPGKMLNHHCGTHSFGSSELLLGHRYDRPKNDMWIIGVVLYCMVVGKLTFDSVIIQDLQRQVVAGVYPAPCGVSKELEDLLSKLLRVNPNFRPTARKAMKHPWFKEHWNGLIVPYEELLPLTPDPAILDAMKSIGLQASVVKHTLKQRKYNEEMATYFFLQKQALQGDGCTAQAQQVSPVAAPFPSLDPAAAFRLEPKRSGSLPVLGTLRVSSSHGHVSHYGQNAHPKGGKRYTVAGRLRPLPMTPTQDHYHKCAVSVPCIQTTSIFSEKSSNKKIKEDNPLSHRAPLEDKPIPSRVRHRGFKGWTRNIANALIKLCCCMPRRKKPRLGQNRISPQK", "length": 509 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZT61-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134479845", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVAFFLGQGSYGSVKLAWHRRTQALVAIKTVEISKNTIRAILSEMTTLELLHHPNIISLFQILVTANQIHFILQYAPGGNLVQLISEEGPLPEEKAKKMFGQIVSAIRHCHSLDIVHRDIKPQNILIDGEGNVKLIDFGLAVKCRPGTLLSRHCGTRGFNAPELVLRQPYDGKSSDVWSLGVLLYFITTGYFPFRGNTIDEIEQKITTGTYTVPHHLSGQLENLIHQIFTVSPEMRPSIEEIENHPWIKKCELKIPPMSDPDYKIIEMLCGMGYNAKDILESLQKKRYDEPMGAYLSLKNHVSEGYDLASITPTKPGDPCPPPPPSPAHPSVFGLPLRRRASEPNFGLLHRQPSREQNPLDLILSGLNMGRCVSMPPIAVYYPKKQRSTSTRALHSRPVASPCVYNNMLGVEIILPHKQDIEMNTSSPPQTMGWFKRLRKGIGDCFSRLCCFPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZXB5-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb2l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLSSLPGRNLAMARLLLLLLSAACLHTGNSAGYQEKNDFGVDQPDVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKHYHGEFIYTSTRPFIHEHFKGRLIMNWTPGQTSGVLRILNLKENDQATYFSSVFLQTPEGMKLWQSIPGTKLIIHALDTTMRSPSIIPSVVPTDDLEYTQGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZY57-1", "protein_name": "40S ribosomal protein S26", "gene_name": "LOC134478821", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSPGPRRPRQEAGSKPRELQQRVLASVKRRCLFSSLGSNTTKKKRNNGRAKKGHGHVQPIRCTNCARCVPKDKAIKMFVIRNILEAAAVRGISEANVFDAYVPPKLYLKLHYCVSCAIHSKVVGNRSCEARKDQTPPPRFRPSGAAPQPPPKPM", "length": 154 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYE5-1", "protein_name": "Oligosaccharyltransferase complex subunit", "gene_name": "Ostcl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METKHSALLRTFPFLVLECPNLKLKKPPWVHMLLAMTMYALVVVSYFFITGGIIYDVSIEPPSVDSMTDEHGHQRPVAFLARRVNGQYIMEGLASSFLFTMGGLGFIILDRSNTPNIPKLSGFLLLFDFVCVLLSFFIARVFMRMKLPDCLMG", "length": 153 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYN2-1", "protein_name": "Non-selective voltage-gated ion channel VDAC2", "gene_name": "AABR07051831.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAECCVLVCPRPMCIPPPYADLGKAARDIFNKGFGLGLVKLDVKTMSCSGGEFSISGSSNTDTGKVSGTLETKYKWCGYALTFTEKWNTNNTLGTEIAIENQICQGLKLTFDTMFSPNTGKKSGKIKSAYKRECINLGYDVDFDFDFGWLAGYQMTFDSAKSKLTRNNFAVCYRTGDFQLHTNVNNGTEFGGSIYQKVLCEDFDTSVNLAWTSGTNCTRFDIIAKYQLDPTASISAKVNNSSLIGVGYAQTLRPGVKLTPSALVYGKSFNAGGHKLGLDLELEV", "length": 284 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYX3-1", "protein_name": "Methyl-CpG binding domain protein 3 like 3", "gene_name": "Mbd3l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LGELGNAGRLTGSMIPSRLQKRRKIQVAKSKRKAKHKSGTTLRNPLRLTSCIFPQPVTVITSYPENKTRYRRDEAKLKKPQQLCALERLKNFQFGGDSKENLSCPLELANAVERIARGMQDEASNQSGDKDQLTSGQVTSDQPPYLETNEHVALQLSPSFSSQGVTLPVPLHLSPSYFLRKVTTGDIQRQAWKVKKARKRLAEALEADRLARQTENMRE", "length": 219 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZU9-1", "protein_name": "Keratin-associated protein", "gene_name": "ENSRNOG00000070302", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "SPSTCELSSSLHSDCQETCIEPSICQRSCVASSPCQMPCYYPRSSTACSPCQGTYDGSMGVGSNSLKSFGGFTGSLGYGNSGFGSFGFGSCGIRSQGFGCNFHRPGYFSSKSVQSSYYQPGYTSGFC", "length": 127 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZY5-1", "protein_name": "Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein", "gene_name": "ENSRNOG00000064452", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKIKAVTEESEAQGEGCSQQHRYQELLVYLNPIAQHPGFPPPDLRKIEKGKKKKKRRPTKQKQIRHGVKEVQKFVNKGKKGIMVLTGDTLRGTAIFQLCARTRICPTSIFPLTDLGAAMGSKHPTCVIMVKLHEEYHEAYDKCLEEVQTLATPL", "length": 155 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A2Z7-1", "protein_name": "Developmental pluripotency associated 1, pseudogene 1", "gene_name": "Dppa1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MMPPQVLISGLLLLLPAAWTTTVTSSDQLWNNHTEVVPTQSPLKISTKDLYIGTSVSAALLILLAGVLAVLKYRHRRKKILESAVVFHGFQNGVFQSTEQSQAVDVYVIEDSKVPVAH", "length": 118 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3D9-1", "protein_name": "Small nuclear ribonucleoprotein Sm D3", "gene_name": "Snrpd3l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSIGRPIEVLQEAQGYMVTRETITGEVYPGKLIEAEDNMNCQMSNITVTYRDGPVAQPEQVYICDTKIRFPILPNMLKNAPVLENLKNKNQGSRAGQGKAAILKAQVAARGRGHEMGPWKLPEAKTVFSIKENFPSCLLLGF", "length": 142 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3N0-1", "protein_name": "Uncharacterized protein", "gene_name": "Pramef20-ps2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQTPPTLEKLAIQSLIRNEDVAMSSLGELPAVLFPALFKEAFTGKHINLVKEVVAAWPFPCLLVGALMKTPNLETLQAVLDGVDMQLTRKFHTRRTKLQVLDLRNMHHYFWNIQAGEEDSSCSAENSKEKKVVKVFHRYALRKRVKVIVELYIHSCLKEEQTCLLKWAQQRKGSLHFCCTKMKVWNLSLCGIGEILKVFDPQHITELELHTEWTLLELAHFAPYFGQMRNLQKAFLAPLHRIMFSNSNGKRDREAKCIKKFISQFSKFNCLQHLHMFCVHFLRDHMNQVLGCLMTPLTLSITYYLISQKDLDSLSRSQSLFQLKHLDLRGVVLCDLDIMPLRGLLEKVADTLETLDLQWCKMTDSQLYALLPALRHCCQLTMVNFYSNNFSVPILKDLMQHIANWSRIRVQQYPAPLECYDDLAQVSVKRFAKLSSELMYTLGVIRQTKNISFATDICHTCGQRCVYHNGSRLCCCWH", "length": 480 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3R7-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "LOC120093241", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAARKALTVVAVLGSGAGVGSILFALVTPGELQKQLMLQEMPERDSRRRDAAVRTKELVMATLKDAAATKENVAWRRNWTVRGDGRSA", "length": 89 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3T5-1", "protein_name": "Large ribosomal subunit protein mL62", "gene_name": "Mrpl58", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EHGGRLGPTLEPEPSWNLVAPAARALCSPDSAQTGERHRVQEHLQPGQAVPRIQGRGYRLEGPGEPRKAGRKGRFLLLLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQKIALTHKNKINKAGELVLTSESSRYQFRNLAECLQKIRDMIAKASQVPKEPSKEDAQLQRLRIEKMNRERLRQKRINSTIKTSRRMTMD", "length": 211 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A478-1", "protein_name": "T-cell activation Rho GTPase-activating protein", "gene_name": "LOC134485907", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDVELVRANQTCTCKTIFFYWATGNALATFRSKEQKVQWYTFLTRSINEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHNIEDYQLWFSPGHKETPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERPRKSCMTSCFHGGSVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTNSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAAASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQSEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKTLFGRDLSKKLSIIKFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKSNTKKLEMSSAVPHEGGPTAGHNGTTSKYNVPQEKILHD", "length": 834 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A4C1-1", "protein_name": "RRM domain-containing protein", "gene_name": "ENSRNOG00000063783", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LTCCAINSDPHPDSGLKMEGHDPKEPEQLRKLFIGGLSFEATDDSLREHFEKWGTLTDCVVMRDPQTKRSRSFSFVTYSCVKEVDAAMCAQPHNVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIKTMEVMEDRLIDKIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGRGGNFDGRGGYGGGGGGSRGSYVGGDGGYNGFGGDSGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGGYDSYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGRMKRGRFGGRSSGSPYGGGYGSGGGSGGYGSRKF", "length": 350 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5E5-1", "protein_name": "Paired immunoglobulin-like type 2 receptor alpha", "gene_name": "Pilrb1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQILLLLLSATCLHTGNSGGYTRKNYFGVNQPAVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKEVHGEFIYQSTLSFIHEHFKDRLILNWTQGQTFGVLRILNLKENDQATYFSQVCLQTTEGMKCWQSIPGTKLIVTHGVICSLLISPQLSYDHEDPLHHHLCRPHSWPGEHKGPKESFTAEPGGHHWDGRGQSCSHHPPLRMDDLSVVEAKASRVTPKPQPE", "length": 230 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5T5-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "Rpl21l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRGTRYMFSRPFRNHGVIPLATYIRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRAYNVTQHAVGIIVNKQVKGKIPAKRINVRIEHTKHSKSRDGFLKRVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPELLERSPYEFMA", "length": 160 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A8T3-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RMNCSQAPGFILLGLSRDPEKWQLFFSVFLVLYLLGLSGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKILQTLWTGDGSISFSGCLTQLYFFAVFADMDNLLLAVMAIDRYAAICHPLLYPLLMTPCRCGVLVSGSWGVAHCVSLTHTLLLSQLYFHTNQMIPHFFCDFGPLLLLSCSDAHLNEGLMMALAGVFGISALLCIVSSYSCIFYAVARVPSAQGKRKALATCSSHLSVVLLFYSTVFTTYLKPPSSSYSSGEVVAAVMYTLVTPTLNPFIYSLRNKDVKSSLRRILNMVKSPD", "length": 310 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A969-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000067430", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFFLFWTFPGLELDKLALLSFESSSSIHPRACASTPAFQRSHNPGDAAQQEAKQREAEMRNSILTRVLDQSAWVRLSDLALVKPDKTKAVEHRVQMARYGQLSGTVSEQGFIETPEKVSQQTEEKATVKFNRREVTDSDEDDDY", "length": 144 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A9H4-1", "protein_name": "NAD(P)(+)--arginine ADP-ribosyltransferase", "gene_name": "Art3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQATARGVIKRKAFPGRQLSLSTTSCPGGKITPAESGNRFESGHHLNVLQRHKRQKRKMKMGHFELVTTLLAAMVLMDVFQVQAEVLDMAENVFDDEYLKCNSRMEMKYIPRMHGEELANDELLQSVWDKAGIQWEAQKAQLSLPKNFKDAYGIALTAYVTEAQDQSPFYHTFNRAVKIAGLSRRRYIYNFPFKAFHFYLVRALQLLRRPCEESYKNVVYSTSPNISFAFGEQNQARLGNFTLAYSAKPQTANEQRLLTIQTCFGVAVGKLLNKESEGIVLIPLSEVFQVSRKGTDDDLILHSINSTCSYYECSFLGGLKAGSCTTNPENPDPGYLNNPDLDSQKLEDSGRKSLDSVKMPEIKVLQGEENPLLPDEKPEDRNRGKANVPTPGLVPVPGPKSHPSSSSGHRLLPSDTASTILLIAAAVDFIAL", "length": 433 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AA84-1", "protein_name": "Ankyrin repeat domain 10", "gene_name": "Ankrd10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSAGAGAGVEAGFSSEELLSLRFPLHRACRDGDLVALCSLLPHTPRAHLAAEDSFYGWTPVHWAAHFGKVGAGTLRRHFPRGVLLGSERTPPCLESAATARSAPPAPPEGSRAHVQQSGLGVKGWGRGGAEAALAPPGVQGACAAARSPGPRGARGVMGGGAEMGSVWPAPRRTQGACAHLWLFRAGRADRMQLRRFARRPSGFGEWCGRLLLEARREPGASRSCLMETGRRAPLRHKGMDAALAAGGVRSAPAVVDGGLAARPTGPLSQLGPPCLECLIQLVRAGASLNVSTTRYAQTPAHIAAFGGHPQCLVWLIQAGANINKPDCEGETPIHKAARSGSLECISALVGNGAQTDLRNASGLTAADIAQTQGFQECTQFLLSLQNHQMSRFCPNGTLSGGHENILPNHINLGTNRKRCLEDSESLGVKKARTRVPSLDHTMPLANGDAEDDADRMHVDREFAAVSDMKNSSSVLNTLTNGSVINGHLDFPCVAQLNGMESRSDPCLTGSNGISNGQPFPSGQGPVCANGTEEPEKTMGVNPEMCGSLHLNGSPSSCVASRPSWVGDIGESLHYGHYHGFGDTAESIPELSSVLEHSSCVRVEQRYDSAVLGAMQLHHGS", "length": 621 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ABF4-1", "protein_name": "Nuclear transport factor 2", "gene_name": "AABR07018058.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGDKPIWEQIGSSFIQNYYPLFDNDRTQLGAIYIGASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSIMAQQYQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRLALHNSS", "length": 127 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC04-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r38", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSMLSQNKTLKSIEEVALHVILLCQVGVGTVANFLLFIHNFSVILTNCQLTPIQVIVTNLAVASAFNLLLLAFPNNVTLFVPRKAPSDLSCKLWYFICLVARSTNLSSTCVLSTYQFVMLLPGNWSRVILKGRAPKIVNYSCYGCWIFSVLNNAYIPVKVSGPQKTQNDTDFKDKWVCSTSGFSVGMSFLRFAHDALFISIMIWTNVSMVILLNRHHHRLQHIHSSNQDHRAYADTRAAHTILMLVVTFLSFYLLDCICTFFHISFVDSRLLLRRIKEVLTASFPTISPFLLIFRGPKNPCSLLSRS", "length": 307 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC51-1", "protein_name": "Non-histone chromosomal protein HMG-17", "gene_name": "Hmgn2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKADAGKDANNPAENGDAKTDQAQKADGAGDAK", "length": 90 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC66-1", "protein_name": "Eukaryotic translation initiation factor 6", "gene_name": "Eif6-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVVRASFENNCEVSCFARLTNTYSLVAIGGSENFYSVFEGELSDTIPVVHASIASCRIIGRGTSVWGTGMGYWYPTTTTDQELQHIHDSLLDSVQIRRVEEGLSALDNVTTCNDYVALVHPDLDRETEEILAGVLKVEVLTVADQVLVGSYCVFSNQGGLVYPKTSIEDQDELSSPLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSLIDRLT", "length": 245 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ACC5-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000069094", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LPLLAFEKYVVCDGELQRLQVSCEVLGDVDPPQRLSASVVQMKQSVVEFLGTLVEQDAQGAAEDMDNALVGDNEEAEGENNSTRTNSDGPFTERPNQRLNNR", "length": 102 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AEL7-1", "protein_name": "Protein phosphatase 4 regulatory subunit 3C like 1", "gene_name": "Ppp4r3cl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEDKLYRVKVYVMMEDKQWKDIGAGQISSKYIDRLQGVCLLVHSESDGSPILECKIQPNVPYQKHQGKVIIWSEAKNHGTAIHFQEPNDCQETWEVICQVQGKDPNVEITQLLTDDLESFKDMLLSWNKVEMSSCELHTLENIADLLSFVNEAPSHKKILTLVLEKEGYIKKLLQLFKTCEKHQNIDGLHYLNNIIRGILFLDNIHLFNIMFSDEFIMDVVGCLEYGPGLDEPKQHRQFLTQNVKFKNVMQITHSQLRKKIQQTYRMQYIYDIVLPTPSIFEVNLLHDLSTMIFFNKIEIITMLQEDEHFLLEVLAQLKDNTVSNERRHELLLFFKEFCAFAKTLHFQKKNTLLKTLIKLGIISALKVVVHMHDYQIQVAALELFAHLVEYSPRLIRAYAMKEAQYSEDNDGLLINIMIKQMTCDSDPEFSRSIILTTVLHAILDPENMRVTTKGHERRKFLNYFYRHCMNKLIEPILSITVENNSDDNRVNICPDNYQNAQLLGAILEILTFCVQYHSKYVKNYIISKNLLSRILILMSSKHTFLILCAVRFMRKMIGLKDKMYNLYIVEKNLFEPVVNAFMHNGHRYNMLNSAIIELFEFIRQENIKSLIANIVEKFFMFFESIQYVQTFKGLKTKYEEEKKKKRERQLRKSLHNIIYQRIYCRHIKAMEVKVKADIFCRQITDKEEEREKGGGGGEGGGGRGGEGEGGREGGGREGEGGGGGKGGRGEGGAVLSMGSDIPSHYDMFVKINEMNERENVIECRKRKSSATSEYSTSCGDTSDNGISTVYCSSLVPLVDYAYDTDGEDDDGSYGNNENEEEEEEEEEEEPPKKKPYFHP", "length": 840 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AFG0-1", "protein_name": "Cytochrome b5", "gene_name": "ENSRNOG00000064959", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFAKEKGKFEDMAKDVKCYTLGEIQKHQDIKNSWAMLHHRVYDLTKFLEEHLGEEEVLRERAGGHASENFEDVGCSTNVQGLSKVHIIGLFHPALITTIKLNSNWWDQLCSPTSQVVVAHTFNPSTREVGAVGFP", "length": 135 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGM4-1", "protein_name": "Proline rich 18", "gene_name": "Prr18", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLRLLGRVMSFSPMPPPPPPPPPPARTQGGPAARQLSRRPCGPPAASPPAPAAAAAGEKKRRPPEMLLSSSWPSATLKRPPARRGPGLGPGTPQPPTSARVPPQPSPGRGGTSATCSAPRRIACSHIPAGSTASGTSAGAGAGPEDATRFSLSLTPEAILVIQRRHLEKQLLARPRRPFPAPSADPRRPLVPCPRTRSSTLRRGGPTSVPDAPLAVAVSSRPPRASLLPGGLQATMPSPRPSSLRPVLKVSLLNEKHKYDDEEYEEEVEVVDEGLVRKCTEWLRGVESAAAARGRTGHLDSLPHLSTL", "length": 308 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGS9-1", "protein_name": "Olfactory receptor", "gene_name": "Or5aq7b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVWNSTGVKEFILIGLTENPNWQVPLFLLFCIIYFIILVGNCGMIFLIWLNVQLHTPMYFFLSNLSFCDICYSTIIAPKMIINFLSEHKSTRLFACILQSFFFAVYATTEVVLLSMMAYDRYVAIANPLMYTVIMTQSICTQMILASYLTGLINSLIHTIGLLKLNFCGPNIVNHFFCDVPPLLKLACSDSHINEILLLVFSGIIAISTLIIVIVSYIHIIIAILRIRSAMGRGKAFSTCASHLTAVALFYGSLTFSYIQPSSQYSMEQEKVSAVFYTLVIPMLNPLIYSLRNKDVKEAAQKLMLGKRNAC", "length": 312 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AIA3-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065493", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIFVPFFPHPGSIRKDGVVYAHTMENSSNSPRETREPAPLRRTWRGCFQRALPRVSKFFRRGRGSTGGWDNGSPRQGPMHSDQDLRHLRSLLSKESCPVMSK", "length": 102 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AK52-1", "protein_name": "Olfactory receptor", "gene_name": "Or9s14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAIEVHRNGSLSAMSLQGFVLLGFRGGAETQALLFTVFLVLYVVTVLGNLTMIMVITLDARLHSPMYFFLKNLSFVDLCLSTVVVPNALASIFFSSKTISFAGCATQFFFFSLLAATEAVLLAVMAYDRFMAICSPLRYPVTMCPMTCVRLVLGTFCVACLNSIVQTSLTFRLPFCSSNRIDHFYCDVPPLLQLACASTALNELVMFGICGFIIVCAVFVVIISYVYITVTILRMHSGSGRHKLFSTCGSHMTAVSLFYGTGFAVYGQPGGVASMEQGKVVSIIYILIIPMLNPLIYSLRNKDVKDALRRLGQRHSLAKESG", "length": 322 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMC4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "ENSRNOG00000068014", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCVFKNAWGHRNMCSMALCSQFGTHLHVSLTDAHSLSCNLIIRSPTKAEPLRYEGHCSMDEIVFLSFNNVNKTMPLGNQEKMANATKVQKCLTQWIDLLGQDLRDKVSEIKVHTTKTSGHPTLRVTMLSKHRHGEIIGASWEFNISENYSFILDLKTMKWKPQDIMKEWKDDETLMKHLNLSIVECSQKFNEFLNQHEERTSRYYLDSALPPAPPPLFKGFTILLWHSYTPAISPTSSDTHSSFINFRDGLIDINFPL", "length": 258 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMN7-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "ENSRNOG00000070681", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPGYITLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLACAEKKAAGKGDVSTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVLYCIIKGKARLGRLVHRKTCTTVVFTQVNSEDKGALAKLVGAIRTNYNDRYNEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMX9-1", "protein_name": "Ribosomal biogenesis factor", "gene_name": "Rbis", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKNKLKGQKSRNVFHIASHKPLKAKNKAKPVTTNLKKINIMNHEKVNRMNRAFVNIQKELANFSKSLSLKSVQKELHHEKEPANVDEATRLMAQL", "length": 96 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ARJ3-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "Or8b101l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTLGNVSSVKEFILLGLTQQPELQLPLFFLFLGIYVVSVVGNLGLIVLIVLNPHLHTPMYYFLFNLSFTDLCYSTVITPRMLVGFVKQNIISHAECMTQLFSFCFFVIDECYILTAMAYDRYAAICKPLLYQVTMSHQICLLMTVGVYMMGFVGAMAHTGSMLSLTFCEGNIINHYMCDIPPLQKLSCTSTSINELVVFTVVGVNVIIPTLTLFVSYTLILSNILSIHSAEGRSKAFSTCGSYIIAVSIFFGAVLFMYFKPSSASVDGDKVSTIFYTILGPMLNPFIYSIRNKDVHVALRRTLKKRIFT", "length": 309 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ATM0-1", "protein_name": "ELAV-like protein", "gene_name": "Elavl3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKDAGAGSCRYKGLGAAAVRPRARSAQRGPVGGREGGREERTHYPAPDRPDRGPAAEGRAAEISVGKSDFCGPRGAALRAPSTARPLPPSTCRQGSGRRSAHPQARVSSRPSRAPPPPSSPLRRPQSQTPGRDPGVSTRRPPRSARPPEPPSIRTAPAGHTRMVTQILGAMESQVGGGPAGPALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSKQHKA", "length": 522 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AUS4-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "ENSRNOG00000062467", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTAAGKTLAVVAVLGAGAGVGSILFALVTPGELQKQSMLQEMPERDSRRRNEAVRTKELVIATLKDAAATKGNVAWRRTGQLEGQGRMCGTKGTNKCSLPIKWISQLDI", "length": 110 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AWY6-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065059", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKATKKSKNTTSDVEPSTSSAKSKKAKTCYQYQTRAGEKKSRWSGSDCSVNVQKTTKKAKRTLPRIAENNTSEKTVPPTKKTKRAKDEQLFGHYHRLMDEISTSTERGPEQSSTDSSSASTSDEESQ", "length": 128 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B5G4-1", "protein_name": "protein-tyrosine-phosphatase", "gene_name": "Ptp4a1l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARMNCPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCKATHDTTLVEKESIHVLEWHFDDGAPPSNQIVDDWLSLVKIKFPEEPGCRIAVRCVAGLGRAPGLVALALIEGGMNYEDAVQFIRQKRRGAFNGQQRLPLEKYHPKMWLRFKDSNSHRNNCCIQ", "length": 173 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B646-1", "protein_name": "Ankyrin repeat domain 66", "gene_name": "Ankrd66", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSREARLHHQTPGDQEAGAACLLSWGGGGASFHGVNTLTLRPAMMACSTELLKDTDSVMELSKLSDMTKLHQAVAAGDYNSVKKILKKGLCDPNYKDVDWNDRTPLHWAAIRGQMEVIHLLIQYGARPCLVTDVGWTAAHFAAESGHLNVLKTLHALHAAIDAADFFGDTPKRIAQIYGQKDCVDFLDTAEPECRDHRQRGLLFDERDPDWDLKKRELELSLPVPDQNTNKKKKRIRGSTRVNHSKAWRI", "length": 251 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G1V0-1", "protein_name": "Ankyrin repeat domain 62 like", "gene_name": "Ankrd62l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRVAGLSSKKSRWLLQSLLDQQRHSLGTGFESANILLSPKYHLKDKDLRKIHKAARDGDAARVQQLLLGKHCVNDKDKKKRTALHIACAYGHPKVVMALVEGKCEVNATDSEECTSLVKAVQCQEEECATILLENNADPNIVDAQGNSALHYAVYYKNTSLAAKLLDHEVNIEATNKDGFTPFLLAVSENKLKIAKFLLMKNASIHAADNQKRTALMHAVSHDSTNLVRFVLEQGVDLFVKDAFGLTAIDYAADFKYNSNMEILLEYKAKRYEESERANLVEKSSEEDSSRRKDQQSQELENMEKEELTEPGNGTEEQEPDGGVTSVEEPRRLDDRGDDQPQEAVTAPRTREKEQELPFTDMCTVVTGKEDEDESSWDSESVSENLPLIRIGVDGLLLVNGQAVENPEKYLHWLHNRKGEESVPNETKGVGDLQAFTPAEPGLELTSEEKHEELSRNEDCQPQVEEERTQEWSGWGAPEALCAAALDHGDIGSPLTRENGHPRARQSPSVDSEEQDGGSGLNIKEEKTRDHEEWSGDFLMDRTSKESEPAAGDLLQVKDSWSLNDTDPNKGSPAKRKSKEKHKVRGEMNAMEDADDFTPLSESCSDNKAELCCNTHQAETETESCELLTRQTGNMEGGVAGEVLKTEPARSREALKETEETGEGARVKMQLPGKDELYSEDAERQQYDMALSALHLKTKQTVRQLQETQDRQREVVRSSQRMQDHLQKLQAGCSEAEAMVQEQGKKTAELQKLHAGMIHELKEKWETIASKYLPLNIQLKYLEQELLSIKIAQKQYEKLHEDQRTLQRDAVDLQHQVQENMAKLDDEKQAMALRDSNNDSLMSQVELRIKNLESNLQKLQAEKESNERNVEKYLQRYIRERELSKTLSHTLHRTNSKLSRVRTDILLVTERNRTVQNTLTTRPVPKSPGVTEHSAYVNRNPNFIASRNLEAAMSSPQPSPELMRRRLLKKQKNMVKNITEEVDKAAAELESWSLEAYPSGSK", "length": 1003 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G430-1", "protein_name": "Large ribosomal subunit protein eL24", "gene_name": "LOC689816", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLETCRNLSAIGYIWEDNSTEEYCKSSRRHGRPTSVTMKVNLCSFSGYKIYSGHERLYARTDGKFSSFLMPNVSPHSFPKGTLGKLTGLSSTEENTRKDSRKKFKRKEPTLQKFQRAITGASLADIMAKRNQKPEVRKAQQEQAIRDAKEAKKAKQASKKTAMAAAKAPTKAAPKQKIVKPVKVSAPRVGGKR", "length": 193 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G808-1", "protein_name": "Paired immunoglobulin-like type 2 receptor beta", "gene_name": "Pilrb2l7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARILLLLLSAACLHTGNSAGYPKKYDYGVDQPAVLSGVQSGSIEIPFSFYFPWELAKDPQMRIAWRWKVFHGEFIYNSTQPFIHEHFKGRLIMNWTQGQTSGVLRILNLKENDQATYFSRVFLRTTEGMKSWQSIPGTQLIIHALITTPGSPSIIPSAVPTTGLEDTRGQRTPSLLNLGAMVGMVVSKVVVIIPLYGWVIFLWWKQRTQFRRDLVSEHPWKNFVPILPAESSSFL", "length": 236 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GB91-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c117b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TNRYYFNIFMIIMQNQSFVTEFILLGLSQNPNVENILCVVFLFIYLATIGGNMIIVVTIIYSPALLGSPMYFFLIFLSLLDACTSSTVTPKMIVDFFYERKTISFECCMTQLFAIHFFTGIEVIILSAMAYDRYVAICKPLHYSSIMTQRLCGILVIVSWAGGFLHSIIQIIFTLQLPFCGPNVIDHYLCDLFPLLKLACTEPHIFVILVFSNSGSISIIIFSILLVSYGIILFSLRAHSSEGRRKALSTCGSHITVVLLFFVPCFLIYARPTSAFSSEKNAFVFATIITPLLNPMVYTFRNKEMKNAIRKMWKRLIMVSCNY", "length": 323 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GF85-1", "protein_name": "Ceramide-1-phosphate transfer protein", "gene_name": "ENSRNOG00000064148", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "HFFLEYLNNLKIMLIFLSPPTGGWASDHHSPTTGTHLRFLNSLGAAFSFISKEVVSKLQIMEHPRSSPQSEHCSSLQSMAAYEVSNKLLDLARRSGPLHSNSGCRTVLCLHRALHWLQLFLEGLRTSSEDARTSTLCTEAYSAMLCAYHSWIRQAVTVAFCALPSGKVFLEMLGEALPFMEQMCDISQFYVEHFLLDLP", "length": 199 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GFV7-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f21c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLTMYLATVLGNLLIILAISTDARLHTPMYFFIMILSFTDVCFSSTTVPKVLANYMLRSQTISFSGCLTHLYFLCVFADMDNFLLAVMAYDRFVAICHPLHYTTKMTNKFCVLLIVGSWVLTNLNALLHTLLMAQLSFCGDNIIPHFFCDATPLLKLSCSDTHLNDLMILTEGTMIVVTPFFCILISYIHITCAVLRVSSPRGGWKAFSTCVSHLAVVCLFYGTIISLYFNPSSSHFAGKDMAGAIMYTVVTPMLNPFIYSLRNRNMKGVLRKVLILRFPSKQ", "length": 313 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GGC1-1", "protein_name": "Histocompatibility 60b like 1", "gene_name": "H60bl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKGATSKCNHSLTLSLLVLLNSLGTMQVDGTDSLSCNFTVQYKVSLGQCSVNGMTVLCFDDVRQNSPVCKTEKKGNATKLCNDLNQCLSYSFYEMMKLESGLFESKGNHTLRVTVQSQYNQGEFMDGCWAFMIDRQYPFYFYPKNMTWRENQPNAIKTMSQWENNRELFQSLKFLSTGDFSLCLKKLLTDSRELTRSTIKAPDTTQPTSTTQSPSTGNSTPAMSSNQSPSTGNSTQPTSTTDYLIVFEFTAIFLALIVVSMEKKKVLPAAPLPLQYELQSPSPAVLEES", "length": 290 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GIM2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x11c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADLFNVTEFIFLGLSPNKEVQRVCFVLFLLLYMAIVLGNLLMVVTVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLILDLLAEMKSISVWGCMTQLFFLHYFGGIEIFLLTVMAYDRYVAICKPLHYTSIMNRKVCIVLVGTAWTGGFVHSFAQIVLIFPLPFCGPNTIDHYFCDVLPLLKLACSDTFLIGLLIVANAGTLSVIIFVVLLASYVVILFHLRTLSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRRSDTLPVDKMIAVFYTVITPLLNPLIYSLRSAEVKKAMKNLWFRTMKADEK", "length": 309 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJN1-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein A1", "gene_name": "Hnrnpa1-ps20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LSQSPPRNRTEQLWKLFIDGLSFETTDESLRSHFERWGTLTDCVVMRDPNTKRPRGFGFVTYTTVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGSIKEDTEEHHLREYFEQYGKIEVIEIMTDRGSGQKRGFVFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGRNGSGNFGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGSRSSGSYGGGGQYFANPRNQGGYGGSSSSSSYGSGRRF", "length": 319 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJR0-1", "protein_name": "Aspartate aminotransferase", "gene_name": "Got2-ps6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLHSRMATTFHPGLAAAASARASSWWTHVEMGPPDPILGVAEAFKRDTNSKKMNLGVCAYRDDNGKPYMIPSIRRQRPRLLEKIWTKNAYPSGDWLVFVRLLQRSEPVFCKDILSLAKMSFYPNHPGETTRPSSGMPACSYKVIDTMTHKTCGFDFSGALEDISRIPEQSVLLLHACAHNPMGVDPRPEKWKEMVSVVKKKSLFAFFDMAYQGFASGDGDKDAWAVQHFIEQGINVCLCQSYAKNMGLYGERVGSFTVVCKDEEEAKRVESQLKILIRPLYSSPPLNGARIAATILTSPDLRKQWLQEVKGMADRIISKRTQLISNLKKEGLFHNWQHITDQIGMFFYMIKDGRISVAGVTSGNVCYLTHAIHQVTK", "length": 379 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GL73-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC134481331", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLVSLPEQNLAMARILLLFLSAACLHTGNSSGYRRVNDFGVNQPAVLSGVQSGSIEIPFSFYFPWELANDRSMSIAWIWKYFHGEVIYNSTQPFLHEHFKGRLIMNWTQGQTSGVLRILNLKENDQARYFSRVFLRTTEGMKSWQSIPGTQLIIHALNTTMGSPSIIPSAVPTAGLEDKRGQRNPSLLNLGVMVGMVLAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GLF3-1", "protein_name": "Heat shock protein 90 alpha family class B member 1, pseudogene 13", "gene_name": "Hsp90ab1-ps13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEEVHHGEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLWELISNASDALDKIRYESQTDPSKLDSGKELKIDIIPNPQERMLTLVDTGIGMTKADLINNLGTIAKSEDQTEYLEERRVKEVVEKHLQFIGYPITLYLEKEREKEISADEAEEEKREKEEEDKEDEEKPKIEDVGSDEEDESSKDKKKKTKTIKEKSIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNAWEDHLAMTSLSGYVSRMKETQKPIYYISGESKEQVANSAFVERVWKRGFEVVNMTEPIDDYCVQQLKEFNGKSLVSVTKEGLELPEDEEEKKKMEESQTKFENLCKLMKEILDKKVEKVTIPSRLVSSPCCIVTSTCGWTANMERIMKARALRDNSTMEYVMAKKHLDINPDHPMVETLRQKAEADTNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNCIYCMIKLGLGIDEDEVTAEELSAAVREEIPPWRVMRMPLAWKKWIKGSWEAPALCIVSLGLPQQP", "length": 518 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GM54-1", "protein_name": "MAGE domain-containing protein", "gene_name": "Mageb11l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPHDQKSKLHSRENSYQAGGGAQAYGDAEEIAEAAAEAAEESSAKSQSQPGAEYSRNHRAPPKAKPSAKLILSSSSSESDESSHEESEPSVQKDRPFLHQDLIERRVAILLQYLLHNYNLKQLTTKEEMLKVITKKYEKDFPEILRKASEKLEDAFAVEVREVSSSQPSYDLISKLKLPNNGRIRAGKGLPKTGFLMSILGIIFIQGNSASEEDIWKILKKKRIYPGKKHRVFGEPRKLMTQYLVKLKYLEYRQVAHSDPPRYEFLWGPQAHAETSKMKVLEYLAKINKTTPHAISALYQEALKDEKERAEVRDEDNTDTTDQSTEGSPEKSPTASTTPVDT", "length": 342 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8J8YII4-1", "protein_name": "Coiled-coil domain containing 188", "gene_name": "Ccdc188", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEGPEPLGPCGHSHTQHPPAPVSNNHGGCLNQPCQGFVRWPCLVPLQSTQSLESSRPFPAPGTGSGGPRMRGEAPGMFLSSEGEIPRQRAREPAGARQEEVEVEWDWPLHPGHEQGPPRQTAPPTSGPRPCPCPTLPPRGRATASSRQAPTQLQGGTLESAQQSFLQLEQENHSLKRQNQDLREQLGALLGPGQQFLPLCSEHSSCTALAWVSGNTRSRTHAAAPPAVHSLGPDPGALPQSPESARTRLLEDRAPVQLLRQQELCPGKESFVRQSQSELQQIRLSFERKKMAITEVWDGVAEVHMALNNQATGLLNLKKDIRGVLEQMEDIQLEILGERAQCRTQARKQQQMMEAAGLEAAAGCSAGLHSGLRVRGGPHTLRGAGATPAEPSQRLEAQGLTGSLLTPGGGRLPAFLEQKPSGPSKEARWLVLPQGLRGLTGPCLQHCGTWPLPEAAEKGGGRASPEGWACSWIYSHDTLCM", "length": 481 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8M9PVG7-1", "protein_name": "5-hydroxytryptamine receptor 7", "gene_name": "htr7a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLGDTNRTIIAKSHGETMKSLMAEERARETGASVETFNGIMISEVLVPRLFKIAHESGEVAVAAGSGSMDMKPSSSPILLEMMEVANGTRCAEQILSYGEVEKVLIGGVLTMLTLITICGNMLVVISVCFVKKLRQPSNYLIVSLALADLSVALAVMPFVSITDLIGGRWIFGKFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGWCMAKMVLSVWLLSASITLPPLFGWAQNVNDDRVCLISQDFGYTIYSTAVAFYIPMTVMLVMYYRIFRAAKLSAAKHTITGFPRVEQEEVEEDEVEEDGGDGAEEPTGVDCVTVAIKLQREVEECARLPRILRGVGRRCSDRRSISIFKREQKAAATLGIVVGAFTICWLPFFLLSTARPFICGTECSCIPLWVERTLLWLGYANSLINPFIYAFFNRDLRTTYRSLLSCRYRNINRRLSAAGMHEALRLVERPEVVVSG", "length": 479 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M9QGZ8-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "pimr118", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLFTVLGVIALFLRERDTNNTEEEVQNDVPPVRNSDGQEIDDWCKEPSLLEPVSVHSEEPSLEEPVSAHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLKEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPSLDLSFFSAESSWSEDLSSSFLTVESSWSDDLSSGFLTAESGCGDDEPLFVDSAEPEKLKEDKETQIIEINSHCYAIEAQLGEGGCGAVFSATRLEDGLQVAVKLSDFEEEKRFISVDGFEDPLPLEIALHFLANKGPKVKEIIELLDWKVEADRYFMVLEQPIPCMSLHEFLLDCEGIIPENKLRTIMYQTTVAAQTCCQRGVLHRDIKLENLLINPDTLEVKLIDFGCGDLLTEDSFQYFRGTREYFPPEFSSTGRYHGEPATVWSLGVVLFLLVFYRFPEQSDLPRMNNRRLRIKGLSRDCCDFFHGCLQLDPKDRLELQNLSSHKWIRTRTRRNDENCPNLTDGSSHSNHPITSN", "length": 567 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8V0WZU8-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6B2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMVVNLILGWWLVAVSRAQKLPRPSLSLHPSQGASLGDNVTLRCHLPQPAAWVRLYRYQNPTYIEQKDNVQDMAEFSLTSIKQEDAVIYQCQYQGLAPAGTSQKSDPMELLVTDHRYPPPGISLSPKEHVEMGSNITIQCWNKDYGASFLLHKGGHSAPIQHQEPDYWGTATFTLFGVTPADSGTYRCSYRIGGCCLLFSPLGDNVTLEVIPRPAPPGVNGGPSRNLVAAVAGGCAAAIVIITVSFLLVALRRQMQRAERPGATPRSPEAVQFQVSPGDSEGLTYAQLQAVTPSTHPPTSSTTPEPPIIYAEVGTRGPR", "length": 321 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEA0-1", "protein_name": "C-type lectin like 8, MHCY region", "gene_name": "YLEC8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 276 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XED4-1", "protein_name": "C-type lectin like 18, MHCY region", "gene_name": "YLEC50", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYLSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKAHPQ", "length": 276 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEJ6-1", "protein_name": "Sulfotransferase", "gene_name": "LOC769841", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVCRAAAPNSHPSTMPVHYVTYKGIKFPPAYNSVHSLSFAHNEFLVRDDDVFNITYPKSGTVWMTEILSLIRSHGHPSWNQTVLNSDRMPWFSTRLGLEAALSYPSPRLLTCHLPRHIFPKSFSHSTAKVIYTLRDPRDVVVSYFYFCKMCNSYEDPVSFEQFLRDFLSGELPHGSWFEHVRGWMQMKDRENFFFITYEELKQDLQGSVRRLCHFLGQNLDDDAISSVVQNASFMAMRQNPMCSSILLPADIMDQTKGQFLRKGICGDWKNHFTVAQTETFNRIYLEKMRGLNVAFPWDRDQDPDLTEQ", "length": 309 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGU1-1", "protein_name": "C-type lectin domain-containing protein", "gene_name": "YLEC62", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTGSDPQLPEEDVHISVLESNTSTPAMGEGDQQETFLEHKAVTEPLGQSGEKPQWGSRCHGTGRRRSRVQLIAVHAAVGALILMLVVLVISTVCRRASIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCNAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 277 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGW1-1", "protein_name": "NHL repeat-containing protein 3", "gene_name": "NHLRC3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAPAVLWRLQRLSAAERLEARLSGAVRKEPGRGEARQSEKKPHSPHCPLRCSYACPGRTPMTSESGRKALSHLGRQQQCLNKMAELRARLEAFPAPECLFKTLNPFMGFLRLFFAPQPLGGEQALFRAAQCAEASPRIPAPQAWAGRSRGCHGNAARPASMGRKQAVGPRLVMAGALLTLLGLLWGSQMLKAFDYFSSWKGDGEQQMYKLDISWPKIPEYFSGQTFCVAVDSLHGLVYVGQRGDDIPKVLVFSVEGYFLYSWNDTVEMPHGIFVLNTATDSSVWITDVGSGKYGHTVKQYSPSGKLLQVLGTPGNAGSSLNPLQFDQPAEIFVEESGEMYIVDGDGGMNNRLLKLSQDYKEIWLSGENGTGIGQFKIPHSVTVDPFGRVWVADRDNRRIQVFDKVTGEWLGAWSSCFLEDGPYSVRFTGNYKYLIVAHLNINRLAILAAPPVGEIGDCAIVSTIQLADETKPHLVDVDVKSGAIYIAEIGAQQVQRFVPLS", "length": 502 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPN1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR2A13", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMAVALILGWWLVAASRAQQLPRPSLSLHPSQGVSLGDNVTLRCHLPRPAAWVWLYLEGRWSYAKYIDKKQDTTEFSFLSASHDQAGTYLCQYQVSESEDVSVTSDPVKLVLTDRSFPPPHISLHPEERVGTGTNVTICCWNKDYGATFLLHKDGRSDPIQRLVPDDVGAVSFTLFGVTPADSGTYRCSYHPKNYPFLSSPLGDSVTLEVTPTPAPPGAELVSRGNLVVAVVRGCAAALIFGLGVFFVIDARSLWIRRDESLGGEGI", "length": 269 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPP6-1", "protein_name": "SUN domain-containing protein", "gene_name": "LOC776146", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDETGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XQE0-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6A8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEPMAVNLILGWWLVAGSRAQQLPRPSLSLHPSRGVSLGNLVTLRCHLPRLAAWVWLYRGGGWSYKKGKKKEQDAAEFSFASTLREHAGRYRCQYRVYESAEVSVESDPVELVLTDVRYPPSSISLQPEQHVGTGTSVTIHCWNKDYGATFFLHKDGSSDPLQRQDSSGGGTATFTLFGVTPADSGTYRCSYRHWRYAFMSSPLGDSVMLEVTPTPAPPGAELVSRGNLVVAVVRGCAAVLIFALGVFFVIDARSLWIGRDESLGGKGI", "length": 269 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XTD2-1", "protein_name": "Coiled-coil domain containing 97", "gene_name": "CCDC97", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKEDPKEAEGPTASKWIPIASNGNPTASKWIPIASNGDPTAPKWVPISSNGDPNWVPISSNRDPMASKWIPVSSDRDPTVTKENPPSSNETPAAEWDPKVPPEGRPVEEGDPKASPTEDPPAEPDPKASNCAPLSSHWAPEAAVWDPTSPHRDPTAEPQCSASPEQHRAAQRDPASPMEEDRYPATHGVRPATRADPAPYGDHPEAEEDPLPAAVEAMLAAVAASPVRVRSQQQGDPELTAAERRRDLRALFLRKPLVFLERFHGALQAEHLPCFAHLPPRYEVAFYCRQVRARRQQNPQTGLSRWPRRPGARTRLRNRRYAALRQLIAGGEYFSEEEMRAREPLLYEHYIGQYRDAETPPGTPPCPPHPGTPPGTTWAAALLRSVEEAAVQQRLQRQRLREGDSGEEDEDEDEAEEPHIPDAGELEVLREEFRSRMYQRFLDGEDRDFDYSQVDENPDMDNLDIESRDAEERYFDEEEPSAAPQLE", "length": 487 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Y889-1", "protein_name": "Transmembrane protein 65", "gene_name": "TMEM65", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWLGRAVLLLGRPGGPAAPSSSSRLCSLRGPPRCCCRRRLSSLRGGADGLLPARGAPPGRALGTHPKKEPMEALNTAQGARDFIYSLHSTERSCLLRELHRFESIAIAQDPIAARASCQQYGETWAHQEPSGACSSVHSQAYHQKEAVPSSNCPSTKYDRTHYLWPPLMAEAAGKPGRCPHCCAEGWSSEKLEVAPPSPGQLRHVFFHNALPFVGFGFLDNAIMIAAGTQIELSIGVVLGISTMAAAALGNLVSDLAGLGLAGYVEALASRLGLSIPDLTPKQADMWQTRLSAHLGKAIGVTVGCILGMFPLLFFGDEEEKLEEKN", "length": 328 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YA34-1", "protein_name": "SWIM-type domain-containing protein", "gene_name": "LOC100859602", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAERGQLPPYAKRLCCRPGYGSGCRLGQQAGDTGPGSGTFCAGPSSAAAAAAAAAAATAASLVLLPLGKTQSPESLLDIAARKVAEKWPFQRVEEQFERIPEPVQRRIVYWSFPRSEREICMYSSFDTGAEGFTAPGSAAGNTASGGAVDAVADENRLPFRRGMALLDGGCVDNVLQVGFHLSGTVTEPAMQSEPETVFNVAISFDRCKITSVTCSCGNKDIFYCAHVVALSLYRIRKPDQVKLHLPISETLFQMNRDQLQKFVQYLITVHHTEVLPTAQKLADEILSQNSEISQVHGAPDPTAGASIDDENCWHLDEEQVQEQVKLFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITDQFMADPRLLLWRQQGTAMTDKYRQLWDELGALWMCIVLNPHCKLEQKTSWLKQLKKWNCVDVCPWEDGNHGNELPNLTNALPQGANANQDSSNRPHRTVFTRAIEACDLHWQDSHLLHIISSDLYTNYCYHDDTESSLFDSHGWPLWHEHVPTACARVDALRSHGYSREALRLAIAIVNTLRRQQQKQLEMFQARKKELLYRGITSITNLEGWVGHPLDPIGTLFSSLMEACRVDDDNFHGFSDFMENTSQHKSLEYQHLPAHKFLEEGESYLMLAVEVALIGLGQQRIMPDGLYAQEKVCRNEEQLISKLQEIELDDTLVKIFRKQAVFLLEAGPYSGLGEVIHRESVPMHTFAKYLFTSLLPHDAELAYKITLRAMRLLVLESTAPSGDMSHPHHIASIVPNRYPRWFNLSHIESQQCELASTMLSAAKGDVQRLETVLQSIQKNIHSSSHIFKLAQDAFKIATLTDSLPDITLLKVSLELGLQVMRMTLSTLNWRRREMVRWLVTCATELGVHALDSIMQNWFTLFTPTEATSIVATTVMSNSTIVRLHLDCLQQEKLAGSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAATTGMSYSQLFTIARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACALSHSLGKNELAAIIPLVVKSVKCATVLSDILRRCTLTTPGMVGLQGRRNSVKLMSLDKAPLRQLLDATIGAYINTTHSRLTHISPRHYGEFIEFLSKARETFLMSHDGQIQFTQFINNLKQIYKGKKKLMMLVRERFG", "length": 1168 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YDY5-1", "protein_name": "SKA complex subunit 1", "gene_name": "SKA1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEAEGLEALSRHLAAKIGLIKRLLQLRGLGRREMLAEVGMEVAVLHGLLGRMEEEVNQRRQLAAALQEMRKRAEKEKWEAERLQLVKKAAKEAPLVNDAPLISDEEFESVPGYMRGRLTLAQTNAALRALHAAAASKYRLLRHPPKSLPSSSRALCHRFREEETKETQGLTFVVEADLKEFTQLKVDRTFHRIVGVLRHCRRLREVRGARLVRYVLP", "length": 217 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Z0M2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 10", "gene_name": "TNFSF10", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLPAGGPSPAHTCGAVLVAAVLLQSVCVAVTYIYFTNELKQFANADLVHSCERGHPLSPPPPPDVPQTAVTRPTKAEGGAAPVGASCSIGQSRRAQSDLRQRAANAASPQHGPPCAARSRARCSCPRCTAGPRVCRRTQQKLWDTYSRSGTACLTGEELGDLIQNLDVVESKDRVADPCWQVKWHLGKLIKKMMSRILQENMSAINGDRTQALPRRDEPPQGPTLRIAAHLTGSSKRSSASPHIDYLSYRGIGHKIHSWESSRRGHSFLYNVELWNGELVVPQTGFYYIYSQTYFRFRENEDEDSGLLERIKNPKQLVQYIYKLTNYPDPILLMKSARTSCWSKKAEYGLYSIYQGGVFQLKREDRIFVSVSNSDIVDMDKEASFFGAFMIS", "length": 392 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZCD9-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418390", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMSALLFTLLHYWKIWFCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEREEQQEQVEEEEQLERVEELEQEDQVEHVEQEEQEEREDQGEQVQQEEQVEEVEQEDEEEEYFHHSALTRYIARRAWEKMQGKATKCVLVEELMSDLLQTYTFVCSNSFYPVLQPAIGVGSAFEGWSPCEEDIVYRLLVPIKAPHGHVFHPELGEEGEVLARNSRIRVELVCMCTREQQLGDVLCFLHHSEEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRTWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKVLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRVLRDFKELKDRLFRLLLFGR", "length": 542 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZD85-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418382", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAIFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZE07-1", "protein_name": "LIM domain only 1", "gene_name": "LIMO1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVLDKEDGVPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRDSNPMGWYGSHPVTAAWEAEARTTSLGQPGVRAAELP", "length": 158 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZGC1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "LOC124416945", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVAGSPALLLLLSLGLCFTGAQGQGNTMAVSFLNRSMKHPKEGQRLGLECHTYKTSWGVSWIRLDKDGNLHFIVYISKFSSTTFPGNKGASSQFEVSKQGSSYRLTVKNFRAQDQGIYFCIANINQVLHFSSGQRAFFPVTTTTAAPTTLRAVTLTATTQSSQVTMKDISQHSPDPGRSKENMPNFCCKLVMWVNLACACLLLLTAITITTTHCQRPSSP", "length": 220 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZPB4-1", "protein_name": "trypsin", "gene_name": "LOC107049069", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKFLVLVAFVGVAVAFPIRDEDDDKIVGGYSCARSAAPYQVSLNSGCHFCGGSLISSQWVLSAAHCYKSSIQVKLGEYNLAAQDGSEQTISSSKVIRHSGYNANTLNNDTMLIKLSKAATLNSYVNTVPLPTSCVTAGTTCLISGWGNTLSSGSLYPDVLQCLNAPVLSSSQCSSAYPGRITSNMICIGYLNGGKDSCQGDSGGPVVCNGQLQGIVSWGFGCAQKGYPGVYTKVCNYVSWIKTTMSSN", "length": 248 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A1Z3-1", "protein_name": "Bridging integrator 2", "gene_name": "BIN2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPSLYHPNAIPVPFPSHPCTTLMSSLTHHIIPVPSSCLPNVIPIPYHPHVISTLSLLHPHFIPMAFLNLPHAIPVPPLIHSCAVPMSYHPFPISFSFPSPSHPSIAPMQSPSYPYPTPVPPPFHLLPIPIPTPVPPPCHSCSIPIQPRCRLHAILVPFPPHCHPHPVPAPSPPHPSAIPMPSHFHPHPIPVPPHTISIPSPPQCHLHAIPVPSPTHPHPIPSHPRFPHPLWAQGHPHPRGSNLSPPIPPPPPNTFALQNEGNKLYKDLKAFVGAVKVMHESSRKVAETLQEIYSTEWDGHVELKAIADSNDLLWDDYEAKLGDQALRLMENYLAQFGDIKERIAKRGRKLVDYDSARHHLEALQNAKKKDEAKIAKAEEEFNRAQAVFEELNRELREELPVLYGSRIACYVTIFQNISNLRDIFYKEMSKLNRDLYEVMGKLDKQHSSKVFIIKGVPSKRRSLLISAPVSPPAAYPCPGKAPNWDPSSGAEQTPTSPRVGSDATEDVPNGLAAPGPAEPGAPMPGPPPASPTSVRSASESESECSEESREIDLSPKEMEVSVGSGCPEYPKTEGAAKGEVEGIAASMASMIVSEAIAAATGAAPGDSDGVGGGDSTDSEISPAEGAWGGPSPGGSEERVEGTDVSPEVGSDAGPCEHGTPEPPQQDVSCDPPQDPSESLTPL", "length": 682 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A7J1-1", "protein_name": "Mitochondrial transcription termination factor 4", "gene_name": "MTERF4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAGRLLGLLRARAPRAVLPAPGPASRHRCGTAGPEEGEAAELLAMGFSQAQARRLRLLRPGLEPQRRAEAAAQLLLLGLSAEAALGLLERSPGLLRMETARLKERAEYLRRLGLEGERGGPLPRGVHAAPAEDGGGGAAAAGAVSVHGRAADRAAAELPRGAAGGAGPRAAPLPGAGRRAGRSGGVAGAARPALSSARLHAQYAYFRMGVRQKEMVKARLFRTPFAELRNRHVFLERRGLYRTPHKGQSQSGNPALRDVLRPTEGDFVAGVARASPDEYEVFKRLLAREEEEMEEEEEEDEEEEEEEEGSAALHAEGGDRDWHSSEPSPIAPCPPAPQ", "length": 338 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AKD9-1", "protein_name": "Borealin", "gene_name": "LOC121107214", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPARRKAAAGARGRKLSAFLKDFDREVRSRVEQLRTNGERLVKEMENLYDVELLRLPAALREMNWLEFFAKGGSQKVVEEAVTADLGITEINKLTAELIQTPLKIVTKEKSKQGIEATEEAAEVPLLPPAKKAKHDSQLLLEQAAASTNPRNGKVRTSTKKAPVSRSRRAPSARVKRVSKRSSKSSFITPATGRNLDLCARGGASIVTPRFDSRVFKTPGLRTPAVNERVYTISANGSPLADGNDVFITVPVGGGESIRLTASDLTKKNLLHLNPEARGIMKKLSVRLAQACSSAKTHR", "length": 300 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AMC7-1", "protein_name": "ODF3A protein", "gene_name": "LOC121107218", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPVTKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8W4F7J1-1", "protein_name": "40S ribosomal protein S26", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQPIHCTNCARCMPKDKAIEKFIIRNIVEAAAVGVISEVSVFAAYVLPKLYAKRHYCESCAIHSKVIRNRSREAQKVRTPPPRFRPTGAALRPPPKCM", "length": 98 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F8K9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTVTTFILLGLTDEPQLKTLVFIFLFLTYMLSVTGNIISLTSTDSHLKTAMYFFLQNFSFLEIAFTSACIPKYLYNIATGDKTITYNSCATQLFFTDLFAVTEFFLLATMSYDRYVAICKPLHYVTIVNHTVCRRLIFGSWLAGLLIIIPPLSLGLKLEFCDSNVIDHFVCDAAPLLKISCSETWLIEQMVIVCAVLTFIMTLMCVVLSYVHILKTILQFPSAQQRKKAFSTCSSHMIMVSISYGSCIFIYVKPSPKDSLAVNKGVTILTTSIAPMLNPFIYTLRNKQVKQAFNDAIKRIALFSKN", "length": 309 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F9E2-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RLEFSSLSPAEVPLVAAAGGRGAFDMRCHECDTKNTFACDHIVTCPRGIRRCLTLSIRLSSREIYVYKGCTRNCTFIYADEQPPPGERKPPRSNSLYFVQCCNAITCNRGGPINLEKDITPPLILEEELGGTVRLGEATLFLSVASVLVSHALT", "length": 154 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBC5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLTHSFSFFSSSSSSSTYSSSYPLLPLLLQPQNQFRIWALKDYGQRNSTSLHDFILLGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSTAGQRKAINTCGSHLTVVSIFYGAIIYLYLQPGNSASKDQGKFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 331 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBS2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258626", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTAITTFILLGLTEDPQLQLLLFLFLFLTYILSVAGNLTIITLTLLDPHLKTPMYFFLQNFSLLEISFTTACIPRFLYSISTGDRTITYNTCFTQLFLTDLFVITEFFLLATMAYDRYVAICKPLHYMTIMSNKLCKTMVVCCWLAALLIILPPFSLCFHLEFCDSNLIDHFACDASPLLKISCSDTWLIEQMVIACAVLTFIITLVGVVLSYIYIIRTILKFPSAQQRKKAFSTCSSHMIVVSITYGSCIFIYINPSAKEEVNLNKSVSLLISPISPVLNPFIYTLRNKQVKQALHDSLKKTAFLLRK", "length": 312 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FCJ2-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSRKRNLPQCNPPKKQALSRSSRAELQFPVSRVDRYLREGRYAQRLSSHTPVFLAGVLEYLTANILELAAGEAHSSRKMRIAPEHVQRARSHNETLSSLFQASSVSRGAEEEAEEPLPEAGR", "length": 122 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FD42-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFIILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLNCCITQLFFIHSIFVFESGLLLVMAFDRYVAICYPLRYTTILTHPLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLLLDILLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVCIIILFYGPGIFTALTQRFGRHIPAHIHILLANVCILVPPMLNPIIYGIKTKAIQEQVALILFPKYR", "length": 314 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FH98-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VCHYGNYYSGLSCSCGYGCGYSRCGCNCDYDKCGYRCGYGGYVYGCCHLSCCGRYRPYGFY", "length": 61 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FHY5-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "DTGSCGAIVLTQTPLSLSVSPGEPASISCRSSQSLEEYGKNWLSWYQQKPGQSPRLLIYQATNRASWVPERFSGSGSGTDFTLKISRVEAEDAGVYYCQQYKEFPPTVIQPLTQTPLLGAQLHTWLCVVWGAEGQKL", "length": 137 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FIZ4-1", "protein_name": "Envelope glycoprotein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRPTLSRRHLPTRGGEPKRLRIPLSFASITWFLTLTITPQASSKRLVDSLTSPKPLSLTWLLTDSSTGITINSTQREAPLGTWWPELHVCLRLVIPGLNTMSTPPDILRAYGFYVCPGPPNNEEYCGNPRDFFCKKWSCVTSNDGYWKWPTSRQDRVTFSFVNSYTSYNQFNYGHGRWKDWQRQTQNRQISCSPSDLDYLKISFTEKGKRENIQKWINGMSWGVVYYRGSWGGEGSILTIRLRIETQMEPPVAVGPNKVLTEQGPPIQGQRPSPNPSDFNTTSG", "length": 284 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJ61-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSTKNKHLMKGSKKGPKKKVADPFSKKDWYDGKAPAMLTKKRNIRKTLVTGTQRTKITSDGLKGHVFSSEPCQSAE", "length": 77 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJT7-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKNPEVRKIHSAVFLITYLSTILGNLLIVVTMVTSQSLRSPMYFFLTSLSLMYVTYSSVIAPKMIVDSFSETTAISLEGCMAQLFAEHFFGGVGIILIIVMAYDHYVVCCLLLGGAWVGGSIHATIQLLFICQTPFCGPNVIDCFMCDLFTLLKLACMDTHLLGILVILNSGVMCMAIILILITSYVVILCSLKSYSFEGQHKALSTCGSHLIVVVLFFVPCIFLYVMPVATYPIDKAMAVSFTIVAPMLNPLTCTLRNAEVNNAMRKLWMKQNTLCYH", "length": 279 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKQ6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVQDQDEKKNPMWELGIHKLCLNICEGESGNRLTRAAEVLKQLTGQSPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEIFERHLRVREYKVQEHISLGTKYDPSIGIYSLDFYVVLGRPGFSFADKKHRTGCIGAKHGISKEDAMSWFQQKYDEIILPGK", "length": 163 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKY3-1", "protein_name": "Large ribosomal subunit protein eL27", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGKFVKPGKVVLVLAGRYSGRKAVIVKNTDDGTSDQPYSHALVAGIDRYPRKVTAAMGKKKIAKSSKIQSFVKYSVDIPLHKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKCFFQKLRF", "length": 125 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FLM5-1", "protein_name": "Small ribosomal subunit protein uS14", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGHQQLYWSHLRKFGQGSRSCCVCSNWHGLIRKYSLDMCHQRFCQHMKDPGFIRLD", "length": 56 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FNC8-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLTNYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIALISASYVFILHSVIRMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 301 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP10-1", "protein_name": "Ribosomal protein L19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSVLRLQKRLASSVLRCGKKKVWLDPDETREIANAKSRQQIWKLIKDGLSIQKPGTVHSRARCQKNTLRKGTASAGMPKKSVPERDGNVFKNKRILMEHTHQLKADKARKKLLADQPEARRSKTKEARKRRQERLQAKKEERNRTEVETKFCRLI", "length": 155 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP36-1", "protein_name": "Small ribosomal subunit protein eS24", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQDTASIRTRKFRTNQLLPGKQRVIRVLHPGKATVPKTEIWGKLAKMNKRTPDVIFVFGFRTHFGGGKTTGFGMSHDSLDDYTKTNEPKHKRARHGLYEKSKTSRKQRKERKNRMKKVGGTAKANAGAGQKGGV", "length": 134 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FQE1-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQLFFIHSIFIFESGLLLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDVLLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVSVIILFYGPGFFTTLTQRFGRHIPAHIHILLANVCVLVPPMLNPIIYGIKTKAIREQVAHLLFPKQK", "length": 314 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A9J7F7T0-1", "protein_name": "Protein transport protein Sec61 subunit gamma", "gene_name": "LOC100757015", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDYVMQFVEPSGQFVKDSIWLVKRCTKLDRKEFQKVAMSTAMVFAIMGFTGFVKLIHIPVNNIIVGG", "length": 67 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GY23-1", "protein_name": "Tetratricopeptide repeat protein 16 isoform X2", "gene_name": "Ttc16", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTDSSTEESVNVQTQKIPKLQVPETRETTLQRIFGTSQVFYSVSGVVKPRLTESTVPFRVREYYHQGHHCLEQEDWEMAVLYFSRALHLNPDQVEFYIFRAEAFIQLCDFSSALQNLRRAYSYEPENSKYLERLAFVLYLQGQCLYELCDFQEALYVFLQASDLQPQNPSFSYRCMACLLALNRHQDCLSLVTREVKQGRATADVYILRARIYNFFQKPKLCYQDLRSALLFNPKHPQAKGLLQVMVDQAKKSLQDASILAVQGKLHRALKRISCAIENNPLDPNLFLFRGTLHRRLQQFDPAVEDFLKAMDMVTDSQDNLVQKTQRQLLLTYNDFAVHCYTQGAYQEGVLLLNKAIRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQALELCPKDEGANLRMGVLQEKMGLCEQTRRQFQKAEDHFSAAIKYNPVNAQYYLHRAKNRQLLQNIVGACQDIATVLLLNPKYPKMAPLMAKLFPGMSVEEVLNSHVAQLAKLQLRRMIESGPKASHPQSIVAKRLIERQKAQALMESWNWEQLFTRNPEEEVAPSESLQGKTLREKIEFKREVVEEKKVKILRKVTSLSDSYVDQTSSGSEFSILSPSTLETEVSTMEYKSTSNTAASSAERLLPQYLVTTKYKESLGLSMAPNVTQVSEDLHKSLTENIPDDGPRHHSSKAEATQRPKPRKTEPSQSLGKQRPSQRPSITEATKGPKPRKNRPALSPRQRLRRAKAVQAQNWKPRTNSNSQKTSSLLSNIAVIISSSNEAQDQSPVPSKADDISSYNDSTATSSTNTDSLRLSIHLSKPKYSKDQSPSHNKEEVSPTSNNYAAP", "length": 835 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GZF8-1", "protein_name": "Protein EURL homolog isoform X2", "gene_name": "C4H21orf91", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MIIKRKATVIHHKGTMNEEEQFVNIDLNDDNICSVCKLGTDKETLSFCHICFELNLEGVPKSNLLHTRSLRGHKDCFEKYHLIANQDCSRSKLSKSTYEGVKTLLTKKINWIVQYAQNKDMDLDSECSKNTRHHLFNFRHKPDKKLLPQFDSQVPKYSVKGIAGSTGGLSSYTQRILEQRENTDFGLAILQDSDALWPHKHNQAQKKEETSSGPENVQTQNPRYSREELNSMTLDEVEQLNTKLQQQIQEVFEELTHQVQEKDSLASELHVRHVAIEQLLKNYSKLPCLQVGRAGPRSHLPINN", "length": 304 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7JMJ4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100771730", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDFVNISLVTEFFLVGLTDQPELQMPLFFLFLAVYLITALGNLCLIILTVLNSNLHTPMYFFLFNLSFIDICYCSVFTPQMLMNFILRENIISYMECMAQVFFFCFFVVSECYVLTSMAYDRYMAIYNPLLYNVVMSPNLCLNLMFGSYFIGFSNAVAHTVCMLRLTFCDTNIINHYFCDIPPLLQLSCTSTYVNKLVIFVFASINIIVPTSTILVSYGFILSSIFHISSSEGRSKAFSTCSSHIIAVSLFFGSGALVYFKPSSAVYMNEGKISSVFYTNVVPMLNPLIYSLRNKDIKVALMKSLNSRNL", "length": 310 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AA74KSW7-1", "protein_name": "Predicted gene 3002", "gene_name": "Gm3002", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLNSSKLGVWAAGVPPSSPTLLFRRWVMKVESLISQPMTSGKNELQDHLIFISEKALHKRLFQKENGDEGVTRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSPAESRTWHRPGHDLPQREVLEEEH", "length": 280 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0AAA9RU54-1", "protein_name": "Small integral membrane protein 17", "gene_name": "SMIM17", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MQSLRPEQVRGLLEPERAKTLLPRENKAWEKRAAFAKDWVAVEVGASGCGSDEKDLPSPKTLVPQEWSSVEEDDESEDSQPHWAAALPTSPSCPSQDTGTGSGADLCLQCSSPRTPPWLPWAFSHTIESALPTPPRAWLWSLL", "length": 143 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0AAA9RY85-1", "protein_name": "Core Histone H2A/H2B/H3 domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNMPEPAKSAPAPKKGSKKAVTKAQKKDSKKRKRSRKESYSVYVYKVLKQVHPDTGISSKALGIMNSFLNDIFERITGKTSRLVHYNKRSTITSREIQTTVRLLLPGELAKHAESEGTKAVTSIPALSKYNMPSRC", "length": 136 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0ABK0KVZ2-1", "protein_name": "Eukaryotic translation initiation factor 1", "gene_name": "Eif1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EFGFRSVASAGWGAACPLGLRHVISCGGRAGLEQKARALSSSSTGLFPEGQQRAPPDFSDDICTDKKKNQERGINKWPTTTRNKNYFFVDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLIEIGLAKDDQLKVHGF", "length": 192 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0L002-1", "protein_name": "Oocyte specific homeobox 2 like 1", "gene_name": "Obox2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ILQSVQNTDMIEGPSFLPKFQMSSYTPMDTSSQLPQEPSWNLAFQMGQSPLVTSRTPMQSSPSVPEQNLNWQESQGSSRESSIQMQPGPVMDPGFPTLRSPSGHPSHQRPSRPSSRSGFHVPIEPMALSDKHGGKQTGPVAPRKCRKERTQYSAKQKSVLQEHFAECQYPDKKLCLELATLFGVTENEIKVWFKNNRAKCKQKNVPEALPETNGGPEAVSWSTDFPGSIAVVGCDQGEPMATAILDVDSTPKLNCSQESSLDGNWTYDGAMCCLPEDVLDGNDPVTAGDSGESAPVEAQSDLAAAGAPVAMAVDTQNPEECEDLPLLDEGVWQWMLEDFHQLEDWFTKNYIESPSSASHPLD", "length": 362 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LHI6-1", "protein_name": "CD27 antigen", "gene_name": "Cd27", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAWPPLYWLCMLGTLVGLLATPAPNNCPDRHYWIGAGLCCQMCGPGTFLVKHCDQDRAAAQCDPCIPGTSFSPDYHTRPHCESCRHCNSGFLIRNCTVTANAECTCSKGWQCRDQECTECDPPLNPALTSQPSEAPSPQLPPPTHLPYATEKPSWPPQRQLPDSTVYSRLPSQRPLCSSDCIRIFVTFSSMLLVFVLGGILFFHQRRNHGPNEDSQAVPEELCPYSCPREEEGSVIPIQEDYRKPEPASYP", "length": 251 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LYA6-1", "protein_name": "Prostate and testis expressed 2", "gene_name": "Pate2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLSCLTSELQGSACLCLPSTGSYKHILQHLDLGTMCYKCKKYHLGLCYGLMRSCTLKHRQSCAAENFYILTNRGQSMYHYSRLSCMTNCEDINFLSFERRTELICCKHSSYCNLPMGL", "length": 118 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0M6C3-1", "protein_name": "Prohibitin", "gene_name": "AABR07037878.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNKNIKNSISISVCVGGVGGVRARAHAHAHTSPHACTRVIHAFVMLEVGPRDFVHIKKAFRGIDVKKPVIFDCRSQPRNVPVVTGSKDLQNVNITLRILFRPVTSQLPRIYTSIGLDYAERVLPSITSEILKSVVARFNAEELITQRELVSKQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAETARFVVEKAEHQKAAAIISAEGDAKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSSSQNITYLPVGPSSVGPSVRQSMFLRLPQ", "length": 286 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0AC58FXL6-1", "protein_name": "Cytochrome P450 2X10.2 isoform X2", "gene_name": "cyp2x10.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSDLRGIYSYMLSTVNSLVRDSSLTNFKKEFCVHAYLLSVCIQYQSSVWSSSRSVTMLTALVLLCLGAFLLYLQLRIRRPKNFPPGPAPVPIFGNLLQLNRISPLKDFDKFAQHYGSIYGIYIGSQPAVVLTGQKMIKEALITQAAEFSGRSNNMMFSHVTGGKGVIMADYGESWREHRRFALTTLRNFGLGKKSMEQRILEEVKHICLLLEESAGKSIDPQHLYHQAASNIIASVIFGSRFNYKDAYFQTLITSVEDLTKITIGPWAMLYEIAPVLRIFPLPFQKAFQYFEQITKHVLKVVEEHKTSRVAGEPRDLIDCYLEEMENKSDHRTSFDESQMVTLLFDLFIAGTETTSNTLRTLTLYLMTYTHIQEQCQREIDEVLGARDHVTYEDRNAMHFVQAVIHEGQRVADIAPLSMFHSAKTDTQLRGYSIPKGTIIIPYLSSSLREEGQWKFPHEFNPQNFLNEKGEFVKNDAFMPFSAGPRVCLGENLARMELFLILVTVLRRFRLVWPKDAGEPDFTYIYGGTQSVKPYRVIVEPRMHGEACKFVD", "length": 552 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58J797-1", "protein_name": "Uncharacterized protein isoform X1", "gene_name": "si:dkey-233e3.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANAKQLLKNSLDELVEAELKEFQWYLINDHRDISKAEMEKADRLKTVDKMVSCFGPKGAVKTTVDILRKINQNELAEELENKHKQGNCMSARAEGAVLETCKSPPFDYTNTSRELKKKLKEDYEKILVGNSQTGHKKYLEDIYTDLYVVENETGGRERQHEVIQMESKHNQQDRPLKCNDMFKVQPDTGRKHRRILTLGIAGVGKTVSVNKFILDWAEGKDNQEIVFIFPLPFRRLNLIKEEKYSLIGLLNKYFFSISGGLSSLPEKQGKVMFIFDGLDEYRFKLNFKKDDGFTDVNKEMTVSEIITNLLKRHLVPSSLMWITSRPAASSLIPRDLIDQVTEVRGFIDEQKEHYFIKNSSPEVARNIIGHIKKSRSLYIMCHIPVFCLISLTVLQPLLGQESNEKTPTTLTGMYINFLLSQKQQMKEKYRNDTESEANACSFDEIVLKLGKLAFKQLQKGQLIFYKTDLEKCGLDVRQGSVFSGLCTRMFQEENHYSGEQVYSFVHLSVQEFIAALYVFFTYKNKKANLFLDSWKKELKWKLSEKPLFKLHTAAVKKTLQSKNGHLDLFLRFLMGLSLESNQSDMKELLPWLKLKTGMIKDTTDYIKKKIEEENSAERTINLFHCLNELNDDFVEELQKSLCSGNLTAQDLSSAQWSGLVFVLLMSEETQEKFELQKYRRSDEALMRLIPVVKNTTRALLQCCNLTAQSCESLSSALQSSNCVLRELDLSNNDLQDSGVNLLSNGLKSPKCKLEILRLSGCMVTEEGCGFLSSALTSNPSHLRELDLSYNHPGDSGLKLLSQKLEDPNYTLNKLNLDHGGEKWFTAGLHKYACFLTLAPNTAHIELRLSEENRRVTRVGERQQYPDHPDRFDHHAHVLCRESVCGRCYWEIEMNAGDRVDIAVSYKSIKRKGRGYECVLGQNAQSWALICYVNRVAFRHNMIETRLPVKLMSRRIGVFVDHSAGTLIFHNIYRDSMSLIHSVQTTFTEPLYPGFWVEYGSSVKLC", "length": 1006 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58JHM1-1", "protein_name": "Phoenix isoform X1", "gene_name": "pho", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDLRSKGDTSVGEVMEADPRAELIFETPPPDVVSSINACFEEIDSALKIRRDPSVHSPPSDSDSESLFITQSVTKVVHTKRRLRSSKKPDSISDDSGYVRERRLSENQQTECEEESRSLRSSRRKRSKWEMYASARKATFPFLMKSLKTQHLPIRKHQILENSEVGGFFKCIKKIKTGSVKMGKVISSHLFQSPISDSSEEEDQNSEHDVISVDKALFVPGYKRGINFKWLPDFIRERRTLENYLSNGVDKEKKTEQIIEYRQRNQHPQRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDLEIAECAENSHEGHKVVIEETQRQTVEEASAHLEHEDDLNCKVVEYRKRKRHPKRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDIESVECAENSHEDHNVVIEETQRQTVEEASAHLEHEDDLNCKNQPDVDQPNESNFIGPPQEGDISTQSDTQQTDSDIGSVDLFSPLNSPKRDDQIPNTTSITANVEENDQDSDVTQIESEGQHVSTFTQETQKCFANEEYDSDETHIDTESLSRFKPRTPNKQFTSTKHPEIPQFRVQSPKPPSRQAETVNVQLSPKHLPLSNVPLSEVPISPCESAIVGRQKTMVETETDSPMFKITGPSFLKRKRKRTKDKNAAADFKQHDTNGDVGQMVSCPGDDITGLKAVPIENIEACGVEHEMAIGEQTEELGLKSKELLEESVLSTVNSVSTKSKREKMKKYKVKECEAVENQLVETSKKAKKKKKDKERIATSYPEENNLTNIQSNEGFDSAELRVKEVNQSSQSLNTDQPTCVQTSEEITGETELKKKTTRHETDDPLYESVGLDVTLASQFDVGLRIDEQQEGLVTEEAERDERLQGKAMKVAKGKKKIQDTSFQVDHDIGLDKQRSDSGAKPANLDLDGLESLTIKKKKKKKKKHKLKEKTDPKLDFDFDHNVQFFQTDRLQTTDSVLLDSTHTNKQKKKKLKCQNDTDQSSDLKQLHVVGSKLQTIDLPKTDKHMERTGVSSSDALLEHMDDRTLGMRENNTIQTDQIEHLQTSEEVTRCSSPRLSSDKKREKTSVHPNLDASSVFQFDGFKANEDQAITQNTTKEKQISSEQLENNLVGPPSQVENIANVNSSVLLDHTHMNTLREGQLKEQTYKELALAFGLKQLCIVVNKLKTTDLPKTNKNMEGTGVGSSDELLKHTDDRTLETRENNTIQTNQIEHLQTSEKVERHSSPRVTRLSFAKKWMKTSVDSNLDASSGSQFDGLNSMAKEDWTFSQNMDLPLKRTKNKQKDKERTGVSSDALLKRMDDRPPEMRKKNTIQTNQIEYLQTSEKVTRRSSPRLTRLSLAKKMEKTSVDPNLDASSGSQFDGLKEASKEDRTAPRNSIEEKQSDAISSEGLENNPAHLVSTNKSDNTSPSSQVDNIVGLQSDANSVLLDHTHTDKQKKKKIKHKLIEQTEKELTSEVEDNVQPFQFIELRAMDLPSKRITNKKLKDRKRTGVSSSDAVLKHIDDGPSDMRENNSIQTDKIEHLQTSEEMTRCPSPRLSSDKKRKKKYVDTNLDASSGFQFNWSNGMAKEYSKNSTNISSLDNMHTSKQKKKKKQKLKEQKNVESVGDNVYSLEPDQFSGLQITEIKTKKKDKKRTKQANVEENDLKGILSNKAFKASQTYQLEHIQTSEEIKGRSPNAASKSAKKKKKKKNETKNPQYESVNLDLSLAKEDRTTTQNHTEETQGDGNAVEHLEMNPAGLIKVSKKKKKRENAGIVQLDNIIGLQSGSSTDVKSSVLSDSTDTNKHKKKKRKTLKEQENVEAEGDDVQSVEPDPFSGLQITEMTTKKKRKHKRCEEQRCLRGVSSHEAFKAPPTNLLQHIQTSEEISQCQSPNVAALENGGSPYQLENITEMQPGNSIDINSSEILYSTCTHKQKWKKLKQQENVEADANDVHSAELNLFSELKISEPTTKKKKHKKCVEKCALKDISSNEGIKAPQTSQLEHVQTSKEITQCQSPNAATLKSEKKKKQKRDETEVPQYLDASSVSQFDDVTRLKKQAKVDRTTTQNSSEETQNDDISSKQLEMNPAHLIKVSKRKKKREKAGSPYKVDKIVGLQSGNFTDVNFSQLSDSKRTDKQKKKKKIKLKEQENAEADVDDVHSVELDQFSGLQITKPTTKKKRKHKRCVEESGLRDISSNEAYKAPQTNQLEHIQTSEEITPFQAPNVAALKSAKKKKKKRDKTVEPQCLDASSVSQFDDVKTRAKEDQTLTPNSSKETQGDDSAVECLETNPAGLMKVSKKKKKRENAASPYKVDNIVGLESGNSADVSSSVPSDSTDTNKHKKKKRKKLKKQEIVEADLQTSEEIIQCQSPNVATLKSVKKKKDETKEHQRLDVSSVSQFDDVSRLKKRAKEDRTTIQNSSEETQSADISSEQLEINPAHLIKVSKRKKKRENGRSPSQVGNIVGLQSGNFTDISSSVLSDSTRTDKQKSKQKKKLKEQENVEADANDFHSAEPDQFSGLQITEMTTKKKKKHKRCVEESGLRDISSNYAFKAPQTNQLEHVQTSEEITQCQSPNVAALKSEKKKKNKRDKTDKPQYLDESSVSQFDDVKKRAKADRTTTHNSSEETQKDNISSECLELNPAHLMKISKRKRENKSLGLLSENTADLNSSSLLDGTDTDKHKKKKRKKLEGQENVEADVDDVHSAEPDQFSELQIPEMTTKKKKKHKRCVEESGLKDISSNEALKALQTNQLEHIETSEEMTIKTVKKEKKKRDATEEPHYKSVDLDVSPTESTTEAKLNPTKHKKKRKQSFSGSHDAHEAPERKRKKDRN", "length": 2809 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0MGZ5-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 1-B", "gene_name": "hs6st1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNDTERNMVERTSKFLLIVVGSVFFMLILYQYVAPGVINFGSPHGYLLGEEDMTIFPTPDPHYVKKYYFPIKDLERKIDFEIKGEDVIVFLHIQKTGGTTFGRHLVQNVRLELPCDCRPGQKKCTCYRPNRKETWLFSRFSTGWSCGLHADWTELTNCVPGVLNKRESKSKKMRKFYYITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQQFMDCPYNLANNRQVRMLADLSLVGCYNLSTVPEKRRSQLLLESAKKNLRDMAFYGLTEFQRKTQYLFERTFHLKFIRPFMQYNSTRAAGVDLDNDTIQRIEELNDLDMKLYDYAKDLFQQRYQYKHMLDRREQRLLRGHASFHSPFREDGAGGEGTARLPTEDYMNHIINGW", "length": 407 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A1EC97-1", "protein_name": "Dual specificity phosphatase 14", "gene_name": "Dusp14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSRGHSTLPRTLMAPRMISEGDIGGIAQITSSLFLGRASVASNRHLLQARGITCVVNATIEIPNFNWPQFEYVKVPLADIPHAPIRLYFDTVADKIHSVSKKHGATLVHCAAGVSRSATLCIAYLMKFHNLCLLEAYNWVKARRPVIRPNLGFWRQLIDYESQLFGKSSVKMVQTPYGIIPDVYEKESRHLMPYWGI", "length": 198 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A1XQX2-1", "protein_name": "Neurexin-1b", "gene_name": "nrxn1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMILHLGAHLLFIGLIVCKANAGSSLRFTGSDEQWVAFPMWNACCESEMSFSVKTTHLNGLLVYFDDEGFCDFLELHVHVGKLRLCFSIFCAESTCVLSDVAINDNRWHSVSIMRNFRNTTLIVDDEVKWEEVKSKRRDMTVFSHLFLGGIPSELRSVSLQLTSKTVKDHTSFTGWIMDVKVNDSEPAIISSAGVHEDLCGSENTCLNGGVCSVVEDKPTCDCSQTGYQGKDCSEGLAHLMMLDRGMEEYVATFRGSEYFCYDLSLNPIQSSSDEITLSFRTLQRNGLMLHTGKIADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNEWHDVKVLRNLRQHSGVGYAMVTISVDGILTTTGYTQEEYTMLGSDDFLYVGGSPSTADLPGSPVSNNFMGCLREVVYKNNDAELELSRLAYQGDPKLQIHGVVAFKCESVATLDAITFETPESFLTLPKWNAKKSGSISFDFRTTEPNGLLLFSCGRAKQHNKEAKSPVTLKVDFFAIEMLDGLLYLLLDMGSGTTKTLALNKKVNDGEWYHVDFQRDGKSGTISINSVRTPYLCPGDSELLDLDDPLYLGGVPESSSGTVFPTGAWSALLNYGYVGCVRDLFIDGRSVDVRRAAELQRAAGVKPSCGKEPSGKCVSEPCLNRGVCREGWSRYICDCTGTGFLGHSCERDATILSFDGSKFLKVQFSAAMHTEAEDVSLRFRSLRAYGVLMASTSTHTTDTLRLELEAGRVRLTVNLDCNRINCTTSKGPESLFAGQNLNDDEWHTVRVIRRGKSLKLSVDDLPTVDGEIPGDHTQLEFHNIETGIITGKRQLPTMPSNFIGHLQSLMFNGKPYIDLCKNGDIDYCQTNAPIGFKSIIADPVTFKSCSSYVTLPSLQAYYYMYLFFQFKTTSADGLILYNSGDGNDFIAVELVKGYLHYISDLGNGAHLIKGNSIKPLNDNHWHNVMISRDPNNLHTVRIDTKTTSQTTLGAKNLDLKGDLFVGGVPEQMYKDLPKLVHAKEGFQGCLASVDLNGRLPDLMTEALVCIGQIERGCEGPSSSCEEDSCANQGVCLQQWENFTCDCSMTTYAGPLCADPGSTYVFGRQGGVITYSWPPHDRPSTRVDRLALGFITLMEDATLVRVDSSAGLGDYLKLHIVKGNVVAVFNVGTYDINIEENGKLVNDGNYHIVRLTRSGGNATLQVDDLPVIERFPPGHIDSHRLGTGRLPYRRLVEESLPKNGRQLTIFNSQMTIRIGGWQKQQVSGFQGQMSGFYYNGLKVFSMAADGDPNVRMEGSVRLVGELQSSSTPHGGATVYQSSVTEISSTTSNTITITYSTPADEQQTTDELLVASAECPSDDEDIDPCEPSSGTLCCFVPPAGPTGPAISSFPGPAEVFRESNGTTGMVVGIVAGAALCILILLYAMYKYRNRDEGSYHVDESRNYICNSNGAALKEKNTADDDSGSKSKKNKNKEYYV", "length": 1470 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A2A7I1-1", "protein_name": "Zinc finger protein 978", "gene_name": "Zfp978", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFAPHQESGRRTTKRMSASLENTAQCLLTFKDVFLDFSSEEWECLNFAQRTLYMDVMLENYNNLLFVENHCICGNYEKEKVVEQDTQHIFNEHGHIQEKSFKCNESSNIIHESSESTPHKTNHRDATLQSSNLKRHKTGTTKQVCTYKDCVNCLKGSSIISLNQGTHVEKKEHNRNKNLDEVLVSKHKPIVRQNNSEMNTYTCGEFDKCFTQSDNLQSQQRIYPGKKSYKYSESDKCFTQPSHLSIHHTIHSGEKPYKCSECDKCFTDKCTLRKHQRIHTGEKPYKCNECDKCFTDKGSLRVHQRIHTGEKPYKCSECDKCFTQTSHLSIHRRIH", "length": 335 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A8N2-1", "protein_name": "PRAME like 25", "gene_name": "Pramel25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICGHCPDQDESLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPEWPFPYLSLGKQINNCNLETLKAILEGLDILLAQKVQTSRCKLRVINWRDHDLNLWAGSHEGEGLSEFTTEKQPIENSPGCEVKKELKVMTEVLRMKGRLDESTTYLLQWAQQRTDSINLFCRKLVIEGLTKASVIEIFKTVHADCIQELILRRICIEELAFLNPYLKLMKRLFTLTLDHIIGTFSFGDSEKLDEEIIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDYLPYCLNICELKHLHLSDICLRDLLLEPLGFLLERVGDTLKILELESCCIVDFQFSALLPALSQCSHLREVTFYDNNFSLPFLKQLLHHTALLSQLISECYPAPLECYDDSGVILTHRLESFCPELLDILKAKRQLQSVSFETTQCSKCGGCYIYDQETQCCHFVELLLA", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A9Q9-1", "protein_name": "MAGE family member B5B", "gene_name": "Mageb5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRGQKNKHHRNRLKNKKHNQEKVHPQKDESQEKGHHKRDDFQDHKEARDNAAVEEKSSCSSPSVPGETLEKPPASKTSSDAGWLSCVSSPATVCGDELEFDDGTYFHCGGNSLYSEYRTCQENPCKHCLDMYVNLVEQYVLYKFKMKKLIDRNKLIDLIEPKYRYNFSDIFKRAFENIEIVFAASVIEIDSTNHVYDLVSKLKLPNKGRVCPGRGLPKTGLLMTILAMIFMNGTSASEEDIWKFLNYMQVYPGRKHFIYREPRKLITQDFVKLKYLEYKQISLSDPPCYRFQWGPKAYTETTKMKVLEFMAKGSGVEPSTFSVQYTEALREENQKTKIRKWYPILAQKHCPGHSHQHVQKVMKPQ", "length": 366 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ADW8-1", "protein_name": "Predicted gene 15128", "gene_name": "Gm15128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANREDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHDSRRSRNRFRRAPVQSERSHVYSGRTNNYTDRPQHDLSNRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIAHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESFDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW6-1", "protein_name": "PRAME like 22", "gene_name": "Pramel22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHRLLREEALAISSLKDLPNMLFPVLFEEAFIFGYTKILKAMIPEWPFPYLSIAVLIDNCNLESLKAVLEGLDILLAQKVHSSRCKLKEISWRDTNHGLDGIRPGSHEVEGLSEFMEQKHPNCVEKKELKVTTELSVMNGRLNESDTYLLEWTQQRKDSIHLFCRKLVIQSLTKATVIEIFKIVNADCIPELELCSLCLEDLAFLNPYLRQMDNLLELTLDHITDSLSIGDSEMLEERMITLVSQLPTFPCLQKLCINDVYFIYGNLKEFLGCLKKPLVSFCISNCELSQSDLDYLPYCLNIFELKCLYIINIHLQYLCLEPLGFLLESVRHTLGCLALKSCNMGEPHFKSLLPALSQCFHLTDVNFQENELSLLSLKQLLQHTSKLTQLSYEMYPAPHECYDDRGVILSHRIEQFCPEVLDMLRAKRQPKDINFVTTQCSKCGIYYVYDLETQRCRFLK", "length": 460 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW7-1", "protein_name": "PRAME like 23", "gene_name": "Pramel23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNVNSPPTLMKLASQRLLREEALAISALKDLPNMLFPVMFEEAFINGHTKILKAMIPLWPFPYFSLGMMIKNLTLDTLKAVLQEIDILISKVVHSSRCKLKEIKWKNTDYGLQGIWPGSHEFDGLSEFMEQKQPDCGVKKELKVITHLKLMEGSLDECATYLLQWAQQRKDSIHLCCRKLKIQGSINATVIEIFKIVHADCIQELELCCLCLEDLDFLNPYLKQINNLIRLKLDEIKGTVSMGESRNIDEEKVITLISQLPTLQHLEKLCINDVSFIEGNLKECLRCLKKTLEILCITNCYLLQSDLDYLPYCLNILELKCLDFSNIPLSHLFLEHLRFLFERVRHTLECPILKSCEMGESQFNSLLPAISQCCQLTEVNFYDNELSLIFLKKFLHHTAKLSQLTYELYPAPLECYDNRDIILSHRLENFCPELLNILRAKKTAQGGHLCYNPML", "length": 455 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AHC7-1", "protein_name": "SSX member B14", "gene_name": "Ssxb14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVISCEKIPMEVLHKPKNICKAFQDISTYFSGEEWGKLTEWQKSAYMYMKRNYTRMTGVTVNQPVFMSGKEQAKQSLVKGIEVHDSEDECFEESFGVTPRKRMKLTSVTISIHNVEGSLASGENDSNLAETDGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 168 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AK42-1", "protein_name": "Pre-mRNA-splicing factor CWC22 homolog", "gene_name": "Cwc22rt5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKSSVAHMKQSSGHNRRETHSSYCRSSSPEDRYTEQERFPRDRDYSDYSRSDYERSRRGYSYDDSMESRSRDREKRRERERDADHRKRPWKSPSPDRSPARGIRQSSPQEEPTWKKKKDELDPLLTRTGGAYIPPAKLRMMQEQITDKSSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLAQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDSDSNTDQGAGSSEDEEEEEEEEEEEEEEGEDEEGGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFAESQTKELCNMILDCCAQQRTYENFFGLLAGRFCMLEKEYMESFESIFKEQYDTIHRLETNKLRNVAKVFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPEAEQKKTALTSSSSESSSASDSSDSDSDSSESSSESSSEASDSSSSSSTQSSTSAKGTRKKRQGKARGEEVDKLARGHQALERRQGGREDQRHQEGRTERARSERHRAQNSRDADWRDSLAKHIDDRSHENSHSRVGNGREQGSHREPEDRHGEPKKKQREKRFFL", "length": 830 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE0-1", "protein_name": "Reproductive homeobox 2F", "gene_name": "Rhox2f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYLLDVGPEEDEENANGVKTLMVLLAGDGRNEGESGRGLPGSGASAAEGYRAGEISAGGPAAQVADLMDDSNQEDLGATACDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHLWRHSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE1-1", "protein_name": "Reproductive homeobox 3F", "gene_name": "Rhox3f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSMSNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDNTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEALRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREKYRWYKRL", "length": 215 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ASJ1-1", "protein_name": "PRAME like 14", "gene_name": "Pramel14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDLEAPPTLLQLAAQCTVRKEVLTISVLQNLPMKLFPPLFKEADILRKAKMIKLLVEYWPYPSLLVGLLIDKTNLETFQAILEGVGTWLKRKYRPRMGKLQVVDLRNGHHDFWDMLAGREGGDQLVETMPEKQEVEGHSRRQRLRVFSDLSFKSSRHEDKQQTHLLQWAKDREGFLHLCCEKLEIGALGVSKVKKVLKLLQPEFIKELELNTVGNLSKLTKLVPCISKMRNLQKLMLVRIFGRHTYTPLEERNVTKILSLFPKLSYLQHLTIDDVYFLRDHMNELFRYLEAPLLSLTITLCQISQSDLESFSQHWNYGQLKHLCLKGVSLSTLNVTPLKFFLESVADTLQTLELEDCRMKDSHLRILLPALTKCTRLTSINFYDNNISRDVLQDLLHRTANMSQLTMELYPAPVEVYNEWSYVQVERFSQLCAELMNTLITVRRPKSVCFGTYSCYDCDTHCIYGNQTTFCECLE", "length": 475 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ATW2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADIHNVTEFFFLGLSSNQEVQRVCFVIFLFLYMAIVLGNLLMVVIVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLIVDLLAEKKSISVWGCMAQLFFMHFFGGIEMFLLMMMAYDRYVAICKPLHYTSIMNRQVCTVLVGMAWMGGFVHSLAQVLLIFRLPFCGPNIIDHYFCDVLPVLKLVCSDTFLIGLLIVVNGGTLTVISFVVLLSSYAVILFHLRTQSAEGRRKALSTCGSHVTVVVIFFAPCVFIYLRPTATLPIDKMVTVFYTVITPLLNPIIYSLRNAEVKKVIKILCTRATKVDKK", "length": 309 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWL9-1", "protein_name": "Reproductive homeobox 2C", "gene_name": "Rhox2c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSVNYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGASAAEGYRAGELSAGGLAAPVADLMDNSNQEDLGATGCDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHGWQQSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWM0-1", "protein_name": "Reproductive homeobox 3C", "gene_name": "Rhox3c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVERAGRNLFQVNGHRSALLPELPQDYHRASRSVYGCETKMDSTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BED8-1", "protein_name": "Predicted gene, 58953", "gene_name": "Samt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQFVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEE3-1", "protein_name": "Spermatogenesis associated multipass transmembrane protein 1d", "gene_name": "Samt1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQLVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI6-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 10", "gene_name": "Msantd5f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLAWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI8-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 8", "gene_name": "Msantd5f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLVWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFR3-1", "protein_name": "Histone H2A", "gene_name": "H2al1j", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTHSQRGEFPLSLVDRFLPEGNHSGRLSSSAPVILDSVLEYLSSNILELAGEVAYTTGRKRIAPEDVGLVVQNNEQLCQLFKPGATSVFDPPEPDDN", "length": 109 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFZ7-1", "protein_name": "BTB domain containing 35, family member 9", "gene_name": "Btbd35f11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BH64-1", "protein_name": "Secretoglobin, family 1B, member 30", "gene_name": "Scgb1b30", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLTGALLLLGAALLLTSEGDCGLCPVLQKKVHKFFDGTTEEYVEYLKQYNNDPLVLENAANIKKCSDRMLAEEDKTQATNFINKVTGSRSC", "length": 92 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BHG6-1", "protein_name": "BTB domain containing 35, family member 7", "gene_name": "Btbd35f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSFGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI40-1", "protein_name": "X-linked lymphocyte-regulated 4A", "gene_name": "Xlr4a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSDDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKTVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI45-1", "protein_name": "X-linked lymphocyte-regulated 5A", "gene_name": "Xlr5a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKKKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQHTIVEKEISKVQNRVIMETQDQDISMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI50-1", "protein_name": "X-linked lymphocyte-regulated 5B", "gene_name": "Xlr5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKRKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQQTIVEKEISKVQNRVIMETQDQDIAMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI74-1", "protein_name": "SSX member B6", "gene_name": "Ssxb6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSSCEKIPMEVLYEPKNICKAFQDISTYFSDEEWVKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMRGKEQAKQSLVEGIEIHDSDDECFEGSFGVTPIKRMKLTSVTISIHNVEGSHDSGENDSNLAETGGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BIM8-1", "protein_name": "Major urinary protein 18", "gene_name": "Mup18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 181 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CEK7-1", "protein_name": "Major urinary protein 14", "gene_name": "Mup14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG71-1", "protein_name": "BTB domain containing 35, family member 19", "gene_name": "Btbd35f20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLQPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKMRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTLKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG92-1", "protein_name": "BTB domain containing 35, family member 10", "gene_name": "Btbd35f10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CGC2-1", "protein_name": "BTB domain containing 35, family member 3", "gene_name": "Btbd35f4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQRMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 496 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A3KG49-1", "protein_name": "PWWP domain containing 4C", "gene_name": "Pwwp4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSEYVLCGWKSQLCPARVLSRPRTPAHSKRRGVPFLEVQILPVGEKRRVRSSKVRPLAKSEIISINSLAGKESRGRGSPGQTRASRRALKVALDGLGEGSSFFQGGRAGSRRTSTLAPKVPKEQASSSSSSLGQRLRLRLRQLLPLSLCQRLHLHLRLRLHLHMHLCLQGRNQKGQGLSQRSPGKRVRPDPGPVMMGSQNVPAVPVGEAQAHTAAGLPRSEVEGDVLRGTRVWPSYSKKTPLGKAGGNPGKRKPGTGKRKLRSLSAPASRKGTRSKTEQQAASGPPRHISISPKALKQRVRCAGLEIRAAGAQRKTALAENKDHPGLGTPKPDSKRASAACMPPVLRLRRSLRIASRKKKTHVLCALCGLPEWEPQVHSKVTNTRFKRRGARVQKDAKATNVVSAQEPSTIEQGTLVWFKFQDLPFWPAVVKSVSKIDKMARVLLIEGNMQFERRGIRVPLRKLKHLDCGEKVSLVRRASRLYAQGINWCFSVIDHYREGLSRGSLLGSFMDYYTTQASYPLRRAVQEGDLHIDFPKVSYAELEDWEEETALGGKGPYKKLLPDRMRAAWDRANQKLVDFIVKRKGADQHLLDIVKGRKPSRWLDDLWKSKREVFCIETYLEDDDQLHLVARHLQEVAKEADEALLSLARGDKVRFTMEVLFPEAIIYSIAALDELSYKEAEEKYLRGPPVHYREKELFDKTILKAARKRSAARIRAARDPPVPTP", "length": 728 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A5WVZ0-1", "protein_name": "2.7.1.138", "gene_name": "cerk", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEKQSTLLCSELSVQRRLYEVTLNCAILAWKDVQNAKKHTGRAIYGAVKAGSHCVPVCEIIAVQEKEDDSPCKDTGKWQKVPQSPTDSCQHAFTVYYVERTRQHCWRCSNVTFQYSEHSLCLLWIQTIKEQLALLSAQSTEELAGVHQPLRRKTTRQADLRPQSGPHLFPGFHFHRRDWPHSFSAHPSELRFYIIADGKEPVMKCTGDCFSPRVQLHHLMQLIDGLHQASRKMQFNCQMNIMMFLPPLYHQPGNNGFSLFVSIVTEHANHARDHLKAEADLKKYDGVVCVGGDGMFSEIMHGLVSRTQQDAGVDENSTEETLIPCGLRIGIIPAGSTDCICYATVGSNDPVTSALHMVVGDSQPMDVCSVHSDDRFLRYSVSLLGYGFYGDVLKDSERKRWMGPARYNISGVKTFLSHRYYEGTVSFLPAEENLGTPRDKVQCRSGCSICRRSSSDKLLSKEDEASVSDVDCRDTWTVIRGKFLAINAANMSCACPRSPKGLSPSAHLADGTTDLILVRKCSRVDFLRHLLRHTNKKDQFDHSFVEVYRVKQFRFTPRFQECGSEMDLRESRAGGKHFFCQICRENRACGCMSSQSNWNCDGEILPHTAIQVRVHCQLIKLFARGIEEQPVFEDLYAHCQLNNPPNHEP", "length": 649 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A5WWD5-1", "protein_name": "alpha-1,2-Mannosidase", "gene_name": "man1b1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLPSTRKDFVSLTLSESGSYSNSKQWRRQSCWRKWKQLSRLQRSLILLTLMLLLVCGIATSPTLIGHWRGMNGDDVKNSFVVDLKNEYRSILPEPPSERKDFDRRGAFGLEKLLQGKVNVSGVLGDQNHGLDLKNADKGSEGQKPIISWRGAVIEEEQASDTDTKDTENQGDPASLALAESRLEAVREAFRHAWKGYKDFAWGHDELKPISKSYGEWFGLGLTLIDALDTMWILGLQEEFAEAREWVAKELSFDKNVDVNLFESTIRILGGLLSTYHLTGDNLFLDKAKEIGFRLMPAFSTPSKIPYSDVNIGKGTAHPPRWTSDSTVAEVTSIQLEFRELSRLTGDPKYKLAVMEVMKQVHKLDGKQDGLVPMFINTNNGLFTHQGIYTLGARADSYYEYLLKQWIQGGRIEQELLEDYLQAVEGVKKNLLKKSTPLGLTFVGELSHGHFSPKMDHLVCFLPGTLALGVHYGLPADHMELAKQLIETCYQMYAQMETGLSPEIAHFNMHDGSTQDVDVKIADRHNLLRPETVESLFYLYRLTRDKKYQQWGWEILQNFNKYTRVPTGGYTSINNVRDPSYTSPRDKMESFFLGETLKYFYLLFSEDPTLISLDKYVFNTEAHPLPVWPQAE", "length": 632 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A6NCW0-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 3", "gene_name": "USP17L3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALASGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NCW7-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4", "gene_name": "USP17L4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGYYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATEESTLDHWKFPQEQNKMKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSMNSTDQESMNTGTLASLQGRTRRSKGKNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NDS4-1", "protein_name": "TBC1 domain family member 3B", "gene_name": "TBC1D3B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDISGTLRKHMFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQSKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGRKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NJZ7-1", "protein_name": "RIMS-binding protein 3C", "gene_name": "RIMBP3C", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAKDSPSPLGASPKKPGCSSPAAAVLENQRRELEKLRAELEAERAGWRAERRRFAARERQLREEAERERRQLADRLRSKWEAQRSRELRQLQEEMQREREAEIRQLLRWKEAEQRQLQQLLHRERDGVVRQARELQRQLAEELVNRGHCSRPGASEVSAAQCRCRLQEVLAQLRWQTDGEQAARIRYLQAALEVERQLFLKYILAHFRGHPALSGSPDPQAVHSLEEPLPQTSSGSCHAPKPACQLGSLDSLSAEVGVRSRSLGLVSSACSSSPDGLLSTHASSLDCFAPACSRSLDSTRSLPKASKSEERPSSPDTSTPGSRRLSPPPSPLPPPPPPSAHRKLSNPRGGEGSESQPCEVLTPSPPGLGHHELIKLNWLLAKALWVLARRCYTLQEENKQLRRAGCPYQADEKVKRLKVKRAELTGLARRLADRARELQETNLRAVSAPIPGESCAGLELCQVFARQRARDLSEQASAPLAKDKQIEELRQECHLLQARVASGPCSDLHTGRGGPCTQWLNVRDLDRLQRESQREVLRLQRQLMLQQGNGGAWPEAGGQSATCEEVRRQMLALERELDQRRRECQELGTQAAPARRRGEEAETQLQAALLKNAWLAEENGRLQAKTDWVRKVEAENSEVRGHLGRACQERDASGLIAEQLLQQAARGQDRQQQLQRDPQKALCDLHPSWKEIQALQCRPGHPPEQPWETSQMPESQVKGSRRPKFHARPEDYAVSQPNRDIQEKREASLEESPVALGESASVPQVSETVPASQPLSKKTSSQSNSSSEGSMWATVPSSPTLDRDTASEVDDLEPDSVSLALEMGGSAAPAAPKLKIFMAQYNYNPFEGPNDHPEGELPLTAGDYIYIFGDMDEDGFYEGELDDGRRGLVPSNFVEQIPDSYIPGCLPAKSPDLGPSQLPAGQDEALEEDSLLSGKAQGMVDRGLCQMVRVGSKTEVATEILDTKTEACQLGLLQSMGKQGLSRPLLGTKGVLRMAPMQLHLQNVTATSANITWVYSSHRHPHVVYLDDREHALTPAGVSCYTFQGLCPGTHYRVRVEVRLPWDLLQVYWGTMSSTVTFDTLLAGPPYPPLDVLVERHASPGVLVVSWLPVTIDSAGSSNGVQVTGYAVYADGLKVCEVADATAGSTVLEFSQLQVPLTWQKVSVRTMSLCGESLDSVPAQIPEDFFMCHRWPETPPFSYTCGDPSTYRVTFPVCPQKLSLAPPSAKASPHNPGSCGEPQAKFLEAFFEEPPRRQSPVSNLGSEGECPSSGAGSQAQELAEAWEGCRKDLLFQKSPQNHRPPSVSDQPGEKENCYQHMGTSKSPAPGFIHLRTECGPRKEPCQEKAALERVLRQKQDAQGFTPPQLGASQQYASDFHNVLKEEQEALCLDLRGTERREERREPEPHSRQGQALGVKRGCQLHEPSSALCPAPSAKVIKMPRGGPQQLGTGANTPARVFVALSDYNPLVMSANLKAAEEELVFQKRQLLRVWGSQDTHDFYLSECNRQVGNIPGRLVAEMEVGTEQTDRRWRSPAQGHLPSVAHLEDFQGLIIPQGSSLVLQGNSKRLPLWTPKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYYGELGGHRGLVPAHLLDHMSLHGH", "length": 1639 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A7TZG3-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 9", "gene_name": "Skint9", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSASCLPGFFMSFLLLQNTVLTQAMRSDIKINIQVPDTEGLLLECTSGSLIPPAEMTWRDSNGNIIPHSTAFNSQDRDGLLYLKSSILLKNRAKGPITCSIYNVTTNQEKKRSIVLPDALFKSENMSLMSNKFSCPSIYLITIIFLNFLRGILVFCCLRRKPVCFRNLMSTVMEALYSKMGVCCLLIWECLLLVLYIAFLPIYVSFRSRAFLLDDTYPLYTNWLWNICIILTVIMVLFPGLILCLLWTLNCYGQVSSLPPTSMELSTKDSEQNSSKSDDSQENYDVNCKILETCESKIFSQHQESCEDDTASTLFIS", "length": 319 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A7XV14-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 11", "gene_name": "Skint11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEPSASCLPGFFMVCILLKITVLTQVMSLDIQINTQIPDTEEGVLVECTAESLFPPAEMTWRDSKGNIIPPSSTFDSQDRAGLLCLKSTILLKNRTEGPITCSIYNKTTNQEKRRSIILSDVLFRPQYMSLMSNNLLYLGIYLIFILFLNFLKGILFCLTKRLVHFRKRMIKIKKVWSNKTRACCPLIWEFLEIVLFIAFLPLYLMFRIRVFTLDEAHILYNNWLWKVCKTLIAMMILFTVLILFLLWTLNRYGKMPCLSSMNIDVSTHDAEQNSSKSAKFQENYDVAGQMILETYEETIFCQHQESCEEYNYDPLLLSSLDALGTCEDEKFSQHQESFEEDEDLQSFSDFKIELYSKLGNLTH", "length": 364 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B0BMZ6-1", "protein_name": "Cilia- and flagella-associated protein 119", "gene_name": "Cfap119", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MITPRSSQSLEMKVQTELEHSPKLQEEPDRSPSLVDSSVIRIGTDEQNESPAEATSSPVEVAEDPGANLFPPPLPQPRICMWKYLDIHSMHRLEKAATVEEMREVLAELLELGGPEQSLRDAIILDLFSHALIFCRQQGFSLEQTSAACALLQDLHKACVATPLGNVEECYRYFTSVLFCHGVRRPPFSIDLFKEEQLLALADYVVNTYFRHFKLYKYVFTPQVRLDLSLSYMGLQSLHLWPEEKEDEEATVEQAATPQEEEPEAVTEAEQQPSEVCILQTYIKCQLNKELRQLQQLVEERLKESEERLSNRLAALERPYQTPPSKGKSKAK", "length": 332 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B0G0Z9-1", "protein_name": "Probable polyketide synthase 6", "gene_name": "pks6", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLKNIDLIEKGVAIVGIGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSEASLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGASNIDYQHTNKHQDSVLKNAIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSDISIVGGVNLILDVEMTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECVGVVVLKNLQDAIKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSAPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTAIQIYSKSNYLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQSTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNLNIELPLYQWSDELYFAQNQVLEQHRKGGPPIDHLGLSNSYYSPFKNSYKTLIDINYKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDHKSNEWIQSSNSNFQLLDHGNDIPSNYNIKEIIKNKCNLSKLTKNELYKNIKSKTGLNYTGVFQGVTECYIGDNCTLSVVSLESQTNSFLNIPILDTCLHGMLILINDQCQIVFDKAIGFKYYSSNIPADFKENKDSFYVYSNLRPRVGGDSYHGTIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFQSSLNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSFEEKDDTYFEFNKVIIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKIYKCSYLRKKNQVISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYHPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLTTNGQLVFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCGMPQQSWYQLLNSCNFKDIVMSKECIFFGSVIQAQKPPISLLNSQPKYDNIIIYGGSINSSFVENIKLDSNSKSLFQIETIQEFNKLISKSTITNDSIVYFIKTLETLSLDNFKQITLEYIEINQKLLQINSLCKHVLIVSDSRKTNYLASSAIGAARYFDEFPLLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKKIQIKPSKISHIEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGRDGFGLSTFEILKWKGFKSNLFVTVNSDKTKQYLLKKYGDLITGIYSNTDKSYVAEIKNKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLTKYGRIIDLNSNHLNQSEFLKNINFKYNHGYHNFELSLFQKNKILKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINDILNENQQIRNIDSIFHFAFQQIACKVQEINMKHLNISHGAKSMGAINLHNQSIKRNWKLINFVMASSALSFIDSTDQCTYACANTLLDSFSKYRVSLGLPSTCINLGLIESTGFVSKNESISVFLDGNGIIPTPINRVLGLLDLQIQNASKFTNSMISNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQNKYLPSNRIDYWKNEMKFEESIKPIPNEIRSRNNNSGKIILLTGTTGFLGGFLLFNMLRLDSCKLIYCLIRNKSKSSYPLDEIINNLKYHQLYEKLNKSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKNYNIPSILIRPPSIFLNPETGIGHSSDLTLLMIQSCYELGYCPNQILNGFILINTITWLSNNITNIIMNDNCWTNSKMNIYNVHGKQIQSSLIIKPLEKHFNCKQINNNDWIDMVNNSNKKSCIKLKSFHSLENIFKSENKGYKSNESQSISLSTKSLLESMGSYNTDLKITDKMIISHIKHIFK", "length": 2924 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G100-1", "protein_name": "Probable polyketide synthase 7", "gene_name": "pks7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNFKNINLIEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYLHTNKHQDSVLKNVIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAISQGYHSILNGTSDISIVGGVNLILDVETTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECAGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNEKLSVNEIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRKNEKPVSMMINNFGVTGSNCCLLISEFKKQDYEPYENNYKSNNKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLCQRSVIAASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLINSKLSKYYGYSVLEKLRSIGDDDTTSIHDPNISQPAVCMISVSLFELYCHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYHRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSVLKLNIQSNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIINPVRFTQTISNIYKHIESNQLNNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNKKIDLPLYQWSDETYFAQTQTLEQHREEGPPIDHLGISNSFISPFNNSYKTLIDINNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNQWTQSSNSNFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTHIKSKTGLNYTGVFKGVTECYIGDNCSLSVVSLESQTNSFLNIPILDTCLHGMLVLINDQCQIVFDKTIGFKYYSSNIPAYFKENKDCFYVYSHLKSKSADSYHGSIIVMLSDGSVLYEIQEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSQIPTPSYFKSIIYENDSFHSIVNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKFYKCNNFKKKNQIISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYLPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQVVEQMYQLLTPNGQLVFVEPPYKSILIDSIVGSFDQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDIVMSKECIFGSVIQAQKPPISLLNSQPKHDNIIIYGGGNNSRFFENIKLYSNSKSLIQIETIQEFNQFINKSTITNDSIIYFIKTLETLSLDNFAQITLEYIEINKKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSKISHIEASSIPIDYLASFISLFNVGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFKSNLFVTVNSDETKQYLLDRYGDFISGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKNARIIDLTSNHLNQSEFLKNINFKYNHSYHNFQLSLFQKNKIQKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSIDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYACANTLLDSFSKYRVSLGLPSACINFGSIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNSGKFTNSMLSNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENIGNKNIDELFIEKVSELFSTDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQCGREI", "length": 2513 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G101-1", "protein_name": "Probable polyketide synthase 8/35", "gene_name": "pks8", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLEIINLIDKGVAIVGVGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSDAHQIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYQHINKHQDSVLKNVIAQSAYAVSNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVGMIKAYSYLSMLSKTHGKCKAFDESGDGFTRGECATIVVLKNLQDAVKDGNRIYCVINGSSSNVDGGGHMDKVNLYSPSKQSQFNNINSAFKSTNGKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRINEKPVSMMINNFGVTGSNCCLLISEFKKQDYESYENNNNNKSNHKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLYQRSVVIASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNDEIFKKSIDLIDSKLSKYYGYSVWGKLTTIKDDDLTSIHDPIFAQPALCMLSVSLFEIYCHWGVNPSFILGHSLGEISAAYCSGMIDLDTFCYTVYYRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNDIVFIEIAPHPTISFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYSINFKCQLENKKSNQSINLPLYQWDDELYFAQTQTLEQYTKEGPPIDHLGLSNSYYSPFKNSYRTFIDINNKPFQYLKGHMVKGKYYFPGCGYIDIIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTQIKSKTGLNYTGVFQGATECYLGNDCSLSVLSLKSQTNSFLNIPILDTCLHGMLVLINDQSQIVFDKAIGFKYYSSNIPSDLKEYKDSIYVYSNLKPKNADSYHGSIIVMLSDGSVLYEIQEVIFKSLIPIKHSLKIEYPNDELYKVHLQSKDSQIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKNQRLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSKIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCSYLRKKYQMISHVIIHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYRSLTIDESLLENQAIKPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFIEPPYKSVLIDSIIGSFEQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDILMSKECIFVGSVIHAQKPPISLLNSQPKHDNIIIYGGGGNLSFVENIKLDSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNYKQITLEYIEINQRLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILVDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNNNNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSNISHNEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVDLDETKQYLLDRYGDFITGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKSGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFQLSLIQKNKIQKCLYEISHAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAVNLHNQSIKRNWKLINFVMASSALSLIGSTDQCTYACANLLLDSFSKYRESLGLPSACINLGSIESTGFVSKNESISEFTDGIGYVPTPINLVLGLLDLQIQNAGKFTNSMLSNLISSKFKNIQQTSLFLKFDYLMNLNDNSEQTKKENIGNKNIDELFIEKVSELFSTDQSRINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIKQLQNNTINISIKMILNSLMKNNQI", "length": 2514 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G110-1", "protein_name": "Acyl-coenzyme A oxidase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKNRIEIIKKHLEVNNSQTTNNKDEVLEKELFNSIDTNINVGELKLLIDSVEESKYKDETREFIRNHPKFKENFIGLDMATYRQLVLEQCAAIANRGLIHFTDIKNNLHRYIGALEMFALYNNNILTKLSVQYTLFGGPIIFLGTSRHEKYIEDANTLKTMGCFAMTEIGHGSNVRGIETTAHYDKQTKEFIIHSPTPTSEKFWIGCAYLHATYAVVFANLIIDGTNYGIHAFIVPLRCPKSGAIMKGITIKDCGHKLGLNGIDNGQIRFDQVRIPRENLLNKYSDVSEDGVYKSQFNTPIKNFAATMSPFIVGRMAITKGCSGAAKTSLSIAIEFSHIRKQFGPSSNKELPLITLSSQQRRLMAPLARTILFDLYIQRLTNELCQEKLPASIHAHCSGIKAVYSWFCVAALQTCREACGGQGYRSANRIAEFKNDCDIICTYEGDNTVLMQQLAKYLLGVKQKQTNTTTNRIYLDGEDAKSLFFNFSNINQLFETREEMRLAELKQIIDNSKESAYFAFNNAIPWAVKLGFAHMTKIVFQNSINTLKLKNVKPLTHLIMLDALVSIEEDLGWFVSNHLISPNVAQSIPFLIQDLCFEVTKVSKQIIASFDIPENCKPSSKDLISDLF", "length": 629 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G138-1", "protein_name": "Probable polyketide synthase 21", "gene_name": "pks21", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLENKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSIAMGFQSIQNGTSNLSIVGGVSLLLDPYISKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSKTSTPSKPLLIGSLKSNIGHSEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNNNEKPVSMVINNFGVTGSNCCLILSQFIEQSINQNGNGHSYPAESQQQQQQRFLIPFSANSVKSLKNYEDLIINDIKISTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTNNDKSSNITIKRNQPLVVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLNLKENNIFCAFLGSLSSFHTSSQHSTKNEILPLDIPSKQSRIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDVNFKCQFNHNDDDVSSIRNSKVNISLPNYQFDEQHYWKVDINFEQYRLNGPNVFNSLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNQDIIINNLEFLAPFVLKENVKHTLQTNVYQLGNTDYRVTFNIKDNKTNQWVQTCTGNFQLISLKDNNNDHSSKYDINQLLSECNFTTLSKQEVYKHSRSITGITHLGAFQGIEELYFGNDCIISKIQVNTENFDIDGKPVYQTYDKSFFNTALLDSCSQTIVGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLESDSYKSSVLVLLEDGTKLLEMDCISLHSTLPLLNSLLINNPTTELFTNNLQCKDSLVNILSIDNNQTFSSISSSNTVTEIIKQTIKPIINEKIVFRILQSFSDLELSKQIIETLNQIFDDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDGDDETIIKSIFNILSSNGLLLIIGDDIGDKYNIDSLINLGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKESKYTNEFMKLISNNHISCKQTIISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGTARYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNQIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISNENQNCEFKVGDNVFGIACDTTASHVIADVLYVSHKPENISHVEAASLPVIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIELMHINKKVVSRLLKSISNALNENKLKPIPITTFQIEDVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKSVDVGDPIEMRKSINQILLENPNIDNIDSIFHYAFAQITKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCSYVSANLVLDSLSRYRKSIGLPSTCTNWGAIKSAGFVSRNELVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKNSNLIVSKFNYDSIKKLSSETSTFQRLDFILNSIKEKDNDSNGGENSVSESIQTKILNKISELLSIEQSKINTDIRLSDYGADSLTSVQLKNFIDKDIKSNVITLQQLQNNTIDMNIQTILEQIKKLDSNETKGKSKNIIKKDSAPTLDYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKIKVIVGNLASPLLGLSKLDFDYISNQINLIINSGADINLASNYEESKVVNIGGFIELIKLSTTGDYQKPIVGFSSVSVFFNASNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLLREVAKRGIPSMLIRPPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPKIDKNILTSPIGWISLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSAMNPSFSFLEKQYGCEMVEYEQWKNIINQSKILSCVKLKTFHSLDDLYNIYNLGNGFGVSKKTKELLQSMNSYEGGMVNEKMIQNHINYIFKN", "length": 2779 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G149-1", "protein_name": "Transmembrane protein 184F", "gene_name": "tmem184F", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLSHINIIYIIWILLFFFTCLISFFLVNRHLVNYSSPNVQKNVVRIVMFLPLNSGLSILSSIFPGIAIFNSLVRNCYMAFTAHCFFSMMTNSIGEKNMLDLFESQGKMKFLCCKVMKLNRKLFNTLRFGSIQFFIVKIFCSIATITCISISEEVHSILNVQSFAPYEFLISLVASIFCTISLSIFLAISKEKLSQYWPMTKYRIMIFIFFIEQFEYLFFALIFLRGPFFLGFKNSFDQTIFILHFTVVVTMFLFSIVYLFIYSYKNYRNKASNEPLVGRNFKDSFGLLNYLDVLNPKDLFIDFASIFKTNNNKFKELVEENGDKKPKKNIEDQNQENSNDQPLSIQMA", "length": 348 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G188-1", "protein_name": "GATA zinc finger domain-containing protein 16", "gene_name": "gtaP", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSYQIQNQPYQQIQNTHPSFQQVQPMQVPHLQQQQQHQTMIAQQQHTPPQQHTPPQMNMIQQHTQPMLSQPQISLQMQPPSPILASQQQQQHMQSSPILASSNLTNSNNASQTTLPIITSKLLLKKEPIDQEVVNSTHKTTTTNNKPPKQSKRKEKERLEEEKQTVAQQQQYQPPFIPLASNESNSDNPFKGSHAYGVSTTPYGNSQFNNNNNNNNNNNNNNNNSNNNSNNNNGNNNINNNNNNSNNNNNNNSNNNNNNSNNNNGNNNNNNNNNNNNNNNNHNTNNNNSNSNNNNNNGYQQDKKDDYSMMIWSEVGRKINILIRTTSKATKGTPISTQEIAEAIGASNGVTADLVELIKSINDPTYVRKLPPSSISNTPTMGSQSGGMVYNSSPMLSPSTMSPILQHGNYQMGGDMYFGGNNQFSGDKQSALNNVKNSKGGNTNNSGGGSSSGGTNDTQAKKPARRRKMRYGGTELSCHTCGVTNTPEWRRGPNGAKTLCNACGLAWAKSVKSEKQKELLANSTGVNITEPKKAQKRKKESSDNNNNNNNSSDSNKVLKSDDGSNNTNLTNDDDNGYPSSPNSSNSTSPSSHNINNNNNNNNNNNNNNNNNNNNNNNNNNNNIGNNNNNNINNNNTTNSITTPTTTPFPTTIPAMQIVSQLPVMVPQTQQQPHMSGNIISFQALHQNSGYQHYK", "length": 695 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0R191-1", "protein_name": "C-X-C motif chemokine 11-6", "gene_name": "cxcl11.6", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MKTLAAFLLLSCLIAGEVNGQDRSSRARCFCVDKGLNMVLLKNLDKVEIFPPSPSCNKHEIVVTLKNGAGQKCLNPDSKFTKNVVLKAIGKRMQQSVPHSTTTGTVKSSMTSSTSAPTAFK", "length": 121 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "B1AV09-1", "protein_name": "Leucine zipper protein 4", "gene_name": "Luzp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANHEDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHYSRRSRNRFRRAPVHSERSHVYSGRTNNYTDRPHHDLSDRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIDHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESLDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AY40-1", "protein_name": "SSX member B8", "gene_name": "Ssxb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSFCEKVPMEVLYEPKNICKAFQDISTYFSDEEWGKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMSGKEQDKQSLVEGIEVHDSEDECFEGSFGVTPIKQMKLTPVTISIHNVEGSLASGENNSNLAETSGIQVNVWSHRLRERKYRVIYEEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AYI3-1", "protein_name": "Predicted gene 13272", "gene_name": "Gm13287", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLAELRSVPGHQCLRDRTDFPCPWKEGTNITPMTLGETTSCYSQTLRQVLHLFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AZM5-1", "protein_name": "Predicted gene 12886", "gene_name": "Gm12886", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLPCSLWLLSVCLLSWCCDAKLPVALDPESESVPKPPVLKTATEIAAIVVFMKTSNETPKSGTYGQSLQDGKNKIKDVEKEVLDACSQLCQSLAQDPNLHHGYILRAYFKEHQFLCCF", "length": 119 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1B0R2-1", "protein_name": "Spindlin family, member 2D", "gene_name": "Spin2d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSKLTKKRAGRKRQRSRSPALPKRNIVGCRISHKWKEGDEHITQWNGTVLDQVPVNPSLYLVKYDGIDSVHALELYKDKRVLSLKVISKRVVSSGVTDSSFADAIVGKEVNHLFEGEHGSKEEWRGMVLSQAPILDNSFYITYERDPILYTYQLLDDFKEGDLQIMEGFSDPPSLDIDLELVDGLIGKHVEYTNDDGSKRDGLIIYQIETKPRVYLVKYEDDVHIHVTHLEKEL", "length": 236 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B4F7F0-1", "protein_name": "Claudin", "gene_name": "Cldn6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASTGLQILGIVLTLLGWVNALVSCALPMWKVTAFIGNSIVVAQMVWEGLWMSCVVQSTGQMQCKVYDSLLALPQDLQAARALCVITLLIVLLGLLLYLAGAKCTTCVEDKNSKSRLVLISGVIFVISGVLTLIPICWTAHAIIQDFYNPLVADAQKRELGASLYLGWAASGLLLIGGGLLCCACSSGGTQGPSHYVARYSSPVPHSRGPSEYPSKNYV", "length": 219 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B7ZW38-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein C-like 3", "gene_name": "HNRNPCL3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASNVTNKMDPHSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIAGCSVHKGFAFVQYDKEKNARAAVAGEDGRMIASQVVDINLAAEPKVNRGNAGVKRSAAEMYGSSFDLDYNLQRDYYGGMYSFPARVPPPPPIALAVVPSKRQRISGNTSRRGKSGFNSKSGKRGSSKSGKLKGDDLQAIKQELTQIKQKVDSLLENLEKIEKEHCKQGVEVKNAKSEEEQTSSSSKKDKTHVKMESEGGADDSVEEGDLLCDDDNEDQGDNQLELIKDDEKGAEEGEDDRDRANGQDDS", "length": 293 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "B8JKF6-1", "protein_name": "BTB domain containing 35, family member 13", "gene_name": "Btbd35f13", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRFLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGAINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD1-1", "protein_name": "Spermatogenesis-associated protein 31F1B", "gene_name": "Spata31f1b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD2-1", "protein_name": "Spermatogenesis-associated protein 31F1C", "gene_name": "Spata31f1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD3-1", "protein_name": "Spermatogenesis-associated protein 31F1D", "gene_name": "Spata31f1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HLM6-1", "protein_name": "Small integral membrane protein 20", "gene_name": "Smim20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAARNLRTALIFGGFISMVGAAFYPIYFRPLLRLEEYQKEQAVNRAGIVQEDVQPPGLKVWSDPFGRK", "length": 69 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "C7G009-1", "protein_name": "Thioredoxin fold domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLILNGNWLVKFGAGWSGHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEYESICIKYNIIGYPSLVFFDEGEIKHYRGPRLFENFKEAIDKHLNKEFVAFSQNQPSKIIVITNENLDLLLTGNWLVKFGAAWSLHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEDNSICKKYNITGYPSLVFFNEGQIKHYTGPRQFENFKEAIDKHFKYGVKWSGHCKKFQPVLENLAQHYNSDIENSKIKVAQVHCEGDDSICKKYNITGYPSLVFFDEGETKPYRGLREFDKIKEATDKHFK", "length": 303 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G010-1", "protein_name": "Calcineurin-like phosphoesterase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLKIKFSIISLFILKLVISKPILKFNNNNQFKIIQFTDLHYGSEPVDDIDTIFSQVNILDYEKPDLVILSGDMVTGYEEQFEDDDRNYWKYWNVFTRPFVERNIPWAITFGNHDGEGALSTNEILKIDQTFNLSLSQSNPVEMHGIANYVLKISSSNSLKSEPASLVYIFDSSTKGCSKLDWGCVHQDQVDWFKNTSKSFNKTDSIAFVHIPPVEIIDLWNNYPVYGNYSETSCCFDNDYGDFVSSLVESGDVHGLYFGHDHENDFHGDYKGVDLGYGRKSGAGSYSSKKPLGARVFQLTESPFTLSTWIREEDGNIVSQVIHPPSEFDRKPLQCKMKDKYSKKELIAIKVIGGFLIFLGIVVVGLIGFFGFKHYKKFKKQTLEMQNLV", "length": 390 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G064-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKDEKQFQQFPNKGRTVQANTDLPKGSTVFRCAPFASSIEDSDKLATEKYCGFCLQRIPKSDSKECLCKNCKLYSVCKSCRSINESAVEPFQIIIKSTFHLGSDTRDMRLLLRIIANIANGKQGMQTPIDDYQDFMGLTSTLDKVDKEHMTKFKRGVTSISSLISSVRGVGYLKNTITIHEILECFSSVLTNAHQFSYATSKEIGRGVCPTGYFNHSCMPNTTWSLDDQGMLLFSTSSNVKKGDELSLGYLANEYPLKNRRRELLDGYYFFCQCPLCEFQSNLSGYLCEKCKEPLLNDSIVYHEPSLTNPLDTGIGLIKHLRKMIDFRQQSVEFKKMFSSEQLSNILQKGVPKHIQSVFNCDASDNEELQQIVEISERSIKSLPLINGEPIDFYPLSDRNYYEYFKQLKNSKISSPEELQRIKDKILSLINPTIYNSFKDKIDKRLLI", "length": 449 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C9JPN9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 12", "gene_name": "USP17L12", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLKLSSTTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "D3YTW8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r258", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSIHQFVILVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAESRATQTILIVVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNL", "length": 314 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTX5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r259", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY1-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r107", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLDFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r138", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YXI8-1", "protein_name": "Predicted gene 10377", "gene_name": "Gm10376", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQAGSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQNNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKILCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAVMSNPCA", "length": 184 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYI9-1", "protein_name": "Predicted gene 7347", "gene_name": "Gm7347", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYY1-1", "protein_name": "Secretoglobin, family 2B, member 7", "gene_name": "Scgb2b7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACFPFFEAYASVLSGSRVWLYQELQAFDATAEEKVALEKIQDCYSEESIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z236-1", "protein_name": "Predicted gene 3676", "gene_name": "Gm3676", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQTVSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQHNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKTLCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAAMSNPCA", "length": 184 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z8D1-1", "protein_name": "SIGLEC family like 1", "gene_name": "Siglecl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLWGLRSLLLLHLGFLSPVLVDTKKTAVEDGLCSTVPCVIEFSKAPLRKPMIVSYRLNENISFHAGTSQPRGPVADLSTEEVEYCILLTHNMLGRKNMTYSLYVGLGAQKDLTQKQELHIPGSSMAGEPVSLTCTIHSTCQESKALFLSWKGPIMSSSTTVPINPSSALAIDPKPEDQDTTLRCHLKLSLDNLSSSKVVKLQLVSPARLLNYSCLLKRTLTCSCSFHGIPTPSVQWWVGRTPVSVNSIDAILHMTSTTLESWTNSTIHLMWEPEIIKSLRCEGKNQYGVHASGIFLIPDKSSVSSVFLRGLIQGIVYGAIASALFFFFLVVLGMKILNWWEENQTCKNEEAPTLKKPVWGGAKPAEVGS", "length": 369 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z8T0-1", "protein_name": "High mobility group nucleosomal binding domain 2, pseudo 3", "gene_name": "AABR07053402.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAERDAQGDEAKAKDEPQRRSARLSAKPAPSKPKKAPAKKREKIPKRKERKADAGKDANNPAENRDAKTGQAQKAEGAGVAK", "length": 86 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z9U8-1", "protein_name": "S100 calcium binding protein A7 like 2", "gene_name": "S100a7l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSSEQEVMKLFDLFQNYHVRRTDKLDVQETKRVLREFFPNFMKALNASGIKILNDLEKEITLDEIWDMIGRMAMAYNKKNSNALKD", "length": 91 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZAM9-1", "protein_name": "Olfactory receptor", "gene_name": "Or4f60b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKKVNYSVTSEFVFLGFTNSWDIQLLLFLVSSMFYVACIMGNCLIIFTVASDTHLHSPMYFLLANLSFIDVGISSATSPKMISDLLKKHKVISFRGCVIQIFFNQAIGGAEMVLLIAMAFDRYVAICKPLHYLTMMSPQMCLFFLITAWVVGLMHSVIQLIFIVNLPLCGPNILDSFFCDLPQFIKLACMNTYRLELLVSISSGFMSLVSFFLLSISYIVIILTVLKHSSSGAYKALSTLSAHVTVVVLFFGPAIFFYIWPSSTHLDKFLVLFDAVVTPFLNPVIYTLRNKEMKRAMRRVFRHLMGYRQIS", "length": 311 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZC26-1", "protein_name": "Ferritin", "gene_name": "Fthl17fl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEDAINNHIRLLLQASYSYLSMAFYFDRDDVALGNFKRFFLSKSHNCKASAEMFVFMQNKRGGHVFLPSIAKPDRESWHGGLRAMECAFRMEMTINQSLLNMHELAKGKDDAHLCDFLGQHCLDQQVHVLKKMGGYLTNLRQMGAPEQGLAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCM9-1", "protein_name": "Dynein axonemal assembly factor 3", "gene_name": "Dnaaf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTTPAGSGNGFGTVSWWGLSPALDLQAESPPVDPDSQSKTEHKIPELDALLLGSVDGRHMLRTLARAMLWPLRRFNFYVLENNLEAVARHMLIFSLALEEPEKMGLQERSETFLELWGNALLRPSVAAFLRAQASHLSNLVPEPDRLEELLPWLSLRPLKFRERDALEAVFRFWSGGEKGPEVFPMSRLWDSRLRHYLGSRYDARRGVADWDLRMKLHDRGAQVIHFHEFRRWRDTGVAFELRDLSAYHVPNRTMASGRLLSHRGERVAARGYWGDIATGPFVAFGIEADDKSLLRTSNGQPVKTASEITQHNVTELFRDVAAWRGPRAIKGNVEETKSPEPDAPAQEPFTIHFLPLDSSQTLHHKTCYRGRFQLLYVSCGMIHLLSPELGACVAPGGNLVVELARYLVDLRPKELKAFSDRVVEIAQAAGFAPHTGTKPSETFARFYKLGDSTRGGGDSAVESGPVPSKVLAPTPESINPPQADQAPSLEVMSPPKVDQTPPLEAMSPPEADQAPPLEAMSPPRADQIPPLEAMSPLQAEVVLPLEAISPPQADLAPPPEVISPVQEALAMSSAIAPLKHVT", "length": 583 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCW3-1", "protein_name": "SPATA31 subfamily E, member 1", "gene_name": "Spata31e1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METFLLLMNSISDFWMSSSSMSTVMDMIFAILCGVGFFFLLIPFLKEYPGSPPPGSKKNISEVVKRRQSKDRKKSVTVDGCRDSQKNSLDIQHDLQTMESPIQHLLLDSSPHPFWNSKEKLNQLSLPQLFSYLKVLEALIQQKFNQLLLGLSSVLSESVVATAWVSREPSSGERKTVRFSDSLGFDQALPLAKGPPQRCLDQPLPHQLVTPSLVGMTEIQEQENLPNSISYQTPSIFQSRARGTAYPTTATGIQVPLPTTNEPCHPGLNWKDIPSCKVQNCQGASSQPTESLARCTLPTKNTRSASIPPEHYLMVHHHEQPQHEEKAINLGEQQRTHARFLPSKEPAQLQGDSPPNSNGYGKNWPELNQPAQPSTLNSKTYKWNQMMGPVPTGMLLKKVIAKYGIPNTIKKDLKLRVKDLLCTSSSTPGESLETKNLTLRTDEHSMNTTENLSFLDPKTTMMKSNIMQLPMKHRQLPCDSKAEPYTKAAFILENLHHQDPGGIRVETASSARLRSPLFEQSPPEVQKTQSSPPPIDSHGHSRSHPDQWQRYQSVQPHALCSQAQPQQSRSIQGTGRSILQPNISVWMSKHERWMRSEDVASGHTSWSSRTVGYRDRVSPSVAKQTNILKIKEESPHVWRANLGSGEITNEQALNNSNEDFEPIEAKRSQGHLQMPTQQNTGYLHLKTEEYSNNDLKVNKQPQAWSVSHHADGSNTVHHAMVKLPSQHSLPSLQNGWQDPKTSQGLGDLLMNRDQSVETQFRVHKDKTEATNDSVFHPSEKRPSNLKYGGISQGERLGRVKSSISSFTQLKDSAKTESKSSPNIGGKREAPSKSSLKFIWNGAQYENLSTKLKGQRDSLKKDIPPPVTEQTQEVVHRINVIYSTAVELQSLMDSLVHKLVKTVGEPSELTRKHMTKVQEYKMESLPFQLGSSSQPSKGLHDPNKSRSVRRMSDDHTSPKEPNNHTFTYRGNRDKMQAGVDVQRVCYQHLDKVKIGFGQHSTPMRNGNPCFHKKAGDKQESSLADQSTGDADQTKPKNEIVGSPHRIPERHNQSSRYREIRDNQEPSVDHKAIDPHQNTKKGMGYSQLMSPKENHPVKISGTAAQGASDPEEIRTKSGKECSPHRSPKMHDHSLRHREVRDKPQPGINTQRAYDQHLNSPKKRMTSENLLTPKGTNHPCWHRVTGDKQQSSLSDQRACDPEQMRRSGMSSYPQRSPKVYHLSCSSEKIGEKLLPLVNDQRTHDKHPNSVKTRGCDNLPTPKGSNHPQGYRVIEDKQQLGLAYRRTCDPGQIKKSGMGKGPCKDTEECNLLYRYKIIGNKQQPGIVHRACDRHQSSKEGMGQGQPMNPKVCHSAKHRRTGGQDQSGVAAQGASNPR", "length": 1373 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDD6-1", "protein_name": "Synaptonemal complex central element protein 3", "gene_name": "Syce3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADSDPGERSYDNMLKMLSDLNKDLERLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCKEEMEKNWQELLTETKRKQ", "length": 88 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDJ1-1", "protein_name": "Olfactory receptor", "gene_name": "Or13c3f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDDMDKNNQTFVSEFLLLGLSGYPKTEILYFVIVLVMYLVILTGNGVLIIASIFDSHLHTPMYFFLGNLSFLDICYTTSSVPSTLVSLISKKRNISFSGCTVQMFVGFAMGSTECLLLGMMAFDRYVAICNPLRYSVIMSKEVYVSMASASWFSGGINSVVQTSLAMRLPFCGNNVINHFTCEVLAVLKLACADISLNIVTMVISNMAFLVLPLLLIFFSYVFILYTILRMNSASGRRKAFSTCSAHLTVVVIFYGTIFSMYAKPKSQDLTGKDKFQTSDKIISLFYGVVTPMLNPIIYSLRNKDVKAAVKYILKQKYIP", "length": 320 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDT4-1", "protein_name": "Transmembrane protein 92-like", "gene_name": "LOC100364194", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQEAWVLDALTVIFGLLFSLQGVSSNKTIYKCEDIHCPKGFRCCDNECCLERKIWNTDNEPFRILFIILLVMLPLLCICGLVRRFCPKCRELQHEVRTADHQSPPDPPSIAPLESIWVTSLDPPPPYSQVVQKSTPTEPPPPYSLRPEDSTCPMRETSHETL", "length": 162 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFJ9-1", "protein_name": "Family with sequence similarity 24 member B", "gene_name": "Fam24b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSSFDLRTIIMIVIGSGILAAMFLLTGVVLCLYSKIARALNPSGTGKELDDQLCSDPCKTTQDQIIRVNSLNADTCRPFHGSTIGLENCQPLQCFSACGTYEGANSLTPCLCNTKEGL", "length": 119 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFW5-1", "protein_name": "Transmembrane protein 107", "gene_name": "Tmem107", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRISGLVPSRFLTLLAHLVIVITLFWSRESNIQACLPLKFTPEEYEKQDNQLVAALCLTLGLFAVELAGFLSGVSMFNSTQSLLSIAAHCSASVALSFFIFERWECTTYWYIFAFCSAFPAVTETALFIAVFGLKKKPF", "length": 140 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZG05-1", "protein_name": "40S ribosomal protein S12", "gene_name": "LOC120100003", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEEGIAAGGVMDINTALQEVPKTALIHDGLARGICEAAKALDKRQGHLCVLASNYDEPMYVKLVAALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFEYKK", "length": 132 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGM7-1", "protein_name": "Peptidase inhibitor 16", "gene_name": "Pi16", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNCRVSWMPQHSSAAVSGICPPQEGPWSSYSLWPEPPLLREKEAVAKDSRGVDSTLVQTQGTQPSWRHCVSWAGPPDTAPAAPPQPGWCLCGKDFKSSRQTPDRERQRGLATMHSSCSPWVMLPQLPLLLLLLLLLLTATGPATALTEDEKQTMVELHNHYRAQVSPPASDMLQMRWDDELAAFAKAYAQKCVWGHNKERGRRGENLFAITDEGMDVPLAVGNWHEEHEYYNLSTATCDPGQMCGHYTQVVWSKTERIGCGSHFCETLQGVEEANIHLLVCNYEPPGNVKGRKPYQEGTPCSQCPLGYSCVNSLCEPERKPEKAQDSPPRVTEVPGSRETGIPSLATSESLHFSSVTKVSDSLATEPSPAVETKAPPSLATEGPSSMATEAQSFLTEVPSVSATHIQPSLDEGPVNFLTSTHIPVPKSTDKEASSKSRAASVSPEKSLYPKMSPTETGESPPQIQEEAEPKAELPEREDELPEAEVELPEAEAELPEAKAELPVSSEALVPVLPAQERGGPKASLEHSSYPVPTYLPNFPSASGNATGGRTLALQSSRTGAEDPEKASWDSKNSAPVWGPFPGLLLPLLLLAGIF", "length": 596 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGX2-1", "protein_name": "C-type lectin domain family 2, member M", "gene_name": "Clec2m", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTESSLRLSQSSHHRLTFDLKKVVTLWILVIGVIAVLLWGFFSFPKKFTVTRQTKNEVCSDGVKICLHGWNKLNRNCFTHFSHANSWFTAKETCKFHDATLAVFNDQTELDIVMKQMEDIQTFWIGLYKKDFRGPWVWTNGSKYNNWYEVQDYGHCAFLHKSGIDSTNCNDLKEYICTQEGHCP", "length": 185 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZIZ8-1", "protein_name": "Ferritin", "gene_name": "RGD1560203", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEEAVNTHIRLLLQASYSYLSMAFYFDRDDVALENFKRFFLSKSHDCKASVEMFVFMQNKRGGHVFLPSIAKPDRKSWQGGFRAMECAFRMEMTINQSLLNLHELAKGKGDAHLCNFLGQHCLDQQVHVLKKIGGYLTNLRQMGAPEQALAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKK4-1", "protein_name": "Zinc finger protein 869", "gene_name": "Zfp869", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDTPIVGLSSPDQGLVSFEDLVVHFTQDEWDLLEASQKSLYGDVMLETFRNLTAVGYEWEDEAIEDHCEEPEVNLRDIVSHSEYTHEYEHKEYEEKPPDANFLTSVEGCVETKTSSGPSVCEVCLKTFGLYHLTYNGHHNYDYKELRGSQTEENDCEGNSCDKTSGSLQKEDKIHTGKKLYVCQECGKAFRYPSALQLHERIHTGEKPYECKDCGKAFRGLSALHLHERIHTGEKPYECKQCGRAFTYLSALQLHERIHTEERPCECKQCGKTFRYSRALKLHERIHTGEKPYECKQCGKFFRSHRTLKLHKRIHTGEKPYECKECGKAFRWLTSLKLHEKIHTGEKPYECQECGKAFRCQASYHRHKITHGGETLYECKECGKSFIYPSLLQVHERTHTGEKPFECKLCGKAFRCQSSLRLHERTHTGEKPYECKHCGKAFSSYNYLRFHERSHTGEKPYECKECGKTFTHRSYLRSHERRHTGEKPYQCIQCGRSFSRHSSFKRHQSVHGESPYEQYLIPLSPFSSKE", "length": 530 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKM3-1", "protein_name": "Protein GPR15LG", "gene_name": "Gpr15lg", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRLLTLSGLFFMLFLCLCVLSSEGRKRPAKFPKLRPCCHLSPRSKPITWKGNHTRPCRPCRKLESNSWVVPGALPQI", "length": 77 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZL22-1", "protein_name": "Olfactory receptor", "gene_name": "Or1x2b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSKWGENETGVIEFLLLGITNDPQQQRILFWAFLCMYLVTVAGNTLIFLAISSDPHLHTPMYFFLANLSFDDVCFTTNIIPRLLAGHVSGTETISYAYCLTQMYFLISFGNVDTFLLAAMALDRFVAICYPLQYHTIITPRLCVGLASVVWISSGLIALVHTLLMSRLTFCSSIPEISHFYCDAYLLMKLACSDTRINQLVFLGAVVFFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDSFSTQDTVATIMFTVVTPMLNPFIYSLRNKDMKETVTRLLHRGSKSS", "length": 313 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZLG9-1", "protein_name": "N-terminal Ras-GEF domain-containing protein", "gene_name": "AABR07047293.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSCCVWTTEGSGLKKDKNEGQGGTWKFMLLSCLQCLWPFAQKEIDLTRDNQAQDHEDQGEHEYAPQVVTEPCRESRISADMVENLVNRLVSSLQGGDPFFIPAFLYGYRQFTTTQHVLDRLLKRFAYFYLGCEEDEQIKSSLCCFLDTWIDQYPEEFSQTILKKLKTYLTVNMPSSDLNLRVHMLLKELRQESNESEGKDDDSVSLPVTLLYKTASAADLSSSVEVGSHTSGDLDIEVWFPSQKVQPEPAYPHETETPQSTIKVISWD", "length": 269 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZMT2-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3", "gene_name": "Ndufa3-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGRSSDFFKNAQAKEPVLVVSFSVWGLAVILPMISPYIKYAGVISKATPYNCPVPVRDNGNVPGVPSQPQERLSPSLERLKNL", "length": 84 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNA3-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "AABR07049918.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQETKNVVNPLFEKRSKNFGIGQDIQPKRDLTRFVKWPHYIRLQWQRAILYKQVKVPPAINQFLQALVRQTVTQLLKLAHKYRPETKQEKKQRLLAHAEKKAAGKGDVPTERPPVLRAGVNTVTTLVENKKAQLVVTAHDVDPIELVVFLPALCRKMGVPYCIIRGKARLGRLVHRKTCTTVAFTQVNSKDKGALAKLVEAIRTNYDDRYDEIRCHWGGNVLGPKSVARIAKLEKVKAKEFATKLG", "length": 266 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNR1-1", "protein_name": "Elongin-B", "gene_name": "Elobl9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVFLMIRRKKTTIFIEAQELTTVLELKRIVQGILKRPPEEQLLFKDDQLLDESKTLRDCGFTSRVAKAQDPATVGLVFREDASEGLQIHPYSTPLLPSVMKTGTDSLE", "length": 109 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNU6-1", "protein_name": "Olfactory receptor", "gene_name": "Or5p66b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSWLENGNHTTVAEFLLLGLTDDPVLRVILFTIILCIYLVTVSGNLSTILLIRVSSQLHHPMYFFLSHLASVDIGYSSSVTPNMLVNFLVERNIISYLGCGIQLSLVAFFGAAECFLLAAMAYDRFMAICNPLLYSTKMSTQVCILLVVASYIGGFLNASFAMVSFCSFLFCGPNIINHFFCDFAPLIELSCSDVSVYVIATSFSAGSVTMITALVIAISYSYILITILKMHSTEGRQKAFSTCTSHLTAVTLFYGTVTFIYVMPKSSFSIDQNKIVSVFYLLVIPMLNPLIYSLRNNEIKSALKKQIWRKTVS", "length": 314 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZPU6-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC134485591", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRSTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAEGIIVNKQVKGKILTKRINVRIEHIKHSKSRDSFLKRVKENDQKEKEAKEKGTWVPLKRQPAPPREAHFVRTNGKEPERLEPSPYGFMA", "length": 160 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQ96-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC102550668", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKVKRRGTRYVFSRPFRKHGVVPLVTYMRLYKKGDIVDIKGMGAAQKGMTHKCYHGKTVRVYNVTQHAVGIIVNKQVKGKILAKRINVWIEHIKHSKSRDSFLKQVKENDQKKEEAKEKGTWVQLSLQPAPPREAHFVRTNGKEPELLEPVP", "length": 155 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQD9-1", "protein_name": "Developmental pluripotency-associated protein 3-like", "gene_name": "LOC120096627", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDKSSEKVDPVVNPETQMNDGSQREDEEDSPDDSEILQPETLVKVMKKLTLNPSAKPPKYHRHQRVRLRIKSQPVGNRSERIMREVQSAFPKTRVRTLLSVLKDPIARMRRFVRIEQRQRQLEGNERRDEPFRCLCTFCHYQRWDPSENAKIGQNQKN", "length": 158 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQT0-1", "protein_name": "Glyceraldehyde-3-phosphate dehydrogenase", "gene_name": "AABR07071101.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MILCIKPSSTTKYCLNQCYLISCINKPNLLDGVNGIPLDIVAINDPFIDLNYVVYMFQYDSTHGKFNGTVKAENGKLVINGKPTTIFQERDLANIKWGDADAKYVMESTGIFTTMEKAGAHLKGGTKMVIISAPLADAPILKYDNSLKIVSNASYTTNCLAPLTKVIHDNFGIVEGLMTTVHTITATQKIVDGPSGKLWRGGHGAAQNINPETTGVAKAVGKVIPELNGKLTGIAFHVLTPNVSVVDLTCHLKKPAKYDDIKKVVKQASKGPLKGILGYTEDQVVSCDFNSNSHSSTFDARTGIALNDNFVKLISWCDNEYGYSNRVVDLMAYMASKE", "length": 338 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZTK7-1", "protein_name": "Uncharacterized protein", "gene_name": "AABR07012426.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSGDLEAKISGYTHISVQRFCYKWTISNFSFCMDGIRENITSPVFSLEGNEEVQWCLRIFPNGVDEESKDYLSVSLGLHSCPKSPVLAKVQFWIINAQGEKHQIKEIPNILSFSPKHQWGLRKFILREFLLSRRHGLLPEDQLILCCKVSVVGPSFSTPGHNMTPANKDPRQMLADDVGELWENSLFTDCSLVVAGQEFRAHKAILAARSPVFRAMFEHEMLESLTNRIEIHDIHLQVFKEMMAFIYTGKAPHLHSHSMATELLAAADMYDLQDLKVMCEDSLCRNLSVKTAVPTLMADLHSTELLKTRVMDFIILHASEVSETLEWKSMVESHPHLVEEAFGSLASMHYFFLEPSLKR", "length": 359 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZV50-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLVARSWVCHKTYVTPRRPFEKSRLDQELKLIGEYGLRNKHEVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIVVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLRLAKSIHHAHVLIRQRHIRVRKQVVNIPSFIVCLDSHKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEKKEK", "length": 195 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZWL0-1", "protein_name": "Ribosomal protein L32 like 1", "gene_name": "Rpl32l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALQPLVKLKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILKPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNLNARLRSAENE", "length": 135 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A176-1", "protein_name": "Golgi associated RAB2 interactor 5A", "gene_name": "Garin5a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPRLRTSARSPAPAVRMAISPSGPLGFTSPVTQPRREASPGVPTTQGRGVAMKGGRDLKPASGRADRPLAQAYAPCRPGRLQRHLLSGEFDQLRDFPIFESNFVQVTRFGEVANKVTMGVAASSPALELPDLLLLAGPDKENGHLQLLGLFPLQFVQLFVHDVSRQQLKVKFRTGRAFYLQLRAPPETRDCEFGRWVRLLYRLRFHSPTCAVPFTHEDTVPEESEDEDEVEEGQLQPPEVRAGPRAQGCWARKDGKGPVSCHRGQTRPAGLRTLGALIQPRSFQITKGPEIKPAQLRAREMDF", "length": 303 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A9N2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a77d", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQNNSVSEFILLGLTEDPAGQKTLFVVFLLIYIGTMVGNLLIVWTVIASPSLDSPMYFFLAYLSLIDALYSSTILPKLLIDLLCDKKTISLTACLVQLFVEHLFGGVEIFLLVFMAYDRYVAICKPLYYLTIMNQRVCVCLVVVSWIGAFAHALVQVFSVYKLPFCGPNIIDHFACDMYPLLGLACTDTYFLGLTVVGNNGAISVVVFMLLLLSYGIILNSLKTHSQEGRRKALSTCSSHIMVIVLFFVPCIFMYVRPVSNFPLDKFITVFYTVFTPMLNPLIYTLRNLEIKKSMEKLCRKIFTSDRIRISSCYS", "length": 316 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAM5-1", "protein_name": "Preferentially expressed antigen in melanoma-like", "gene_name": "Pramel", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVKTPNKLLELAIHSLLNEESAAIQALEEIPRELFVPLFIAAFEGGHKNVLSAMVKVWPYYCLHIGSLSIQEPQHELLKAMIENLPVYPAPSSSSRGPKLRILDLRQDTDCRITCPEVSTKTPSCFYSCAYSDRSITKIERQLCCVNAECKTLLPRPVELLVDLSLDGSLMEKEFLVLLMYKIEESLGSLHVCCRDLQIDKLCKCKCTLKFLDLKCIDQLSVDRGSLSDITSILCRMIHLESLSLSNVTFRSLSGKVFKIFLSHLQRMEHLKELSLSSFCLKNHLDRVLRILPPGLDFLYLPFCDLSYRDFKFMSQSPQVTHLKLLNLSNNPMYWGDFEPFHTVLINLSGTLQHLEINHCLISDSAMSALIPALIRCTRLRVLGFASNPISMPMLVNIMHNLTPMKELKYVIYPIPVHCYERWHFQGSLDRQKLAIVQLQLKAMLELAHREDMNWITYCE", "length": 461 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAN9-1", "protein_name": "Similar to human chromosome 6 open reading frame 52", "gene_name": "C17h6orf52", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVETQSPGKECAVLPLWVLTVTSCPLPSAIREQLRVHHSLRCHRDNHYELLHSFYWLSCYSRGSTLSGNGLGPLCVTENPELLAGPWAIPEETTDPAENQEEDFLRDPNLHLNIEESDKEFMAVREELYDSLMNRRWHCLDTVLSNVPDELPQCEVF", "length": 157 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ABB6-1", "protein_name": "Olfactory receptor", "gene_name": "Or13a27c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "VNCIWHSKMVSPNQTVVTEFVLQGFSEHPSLRLFLTGCFMSLYTIALMGNIVIIALVTSSTGLHSPMYFFLCNLATMDIICTSSVLPKALVGLLSEENTISFKGCMTQLFFLVWSGSSELLLLTVMAYDRYVAICAPLHYSSRMSPQLCGALAMGVWSICAANASMHTGLMARLSFCGPKVITHFFCEIPPLLLLSCSPTYVNSIMTLIADAIYGGINFVLTLLSYGCIIASILRMRSAEGKRKAFSTCSSHLIVVAMYYSSVFFAYISPGSSYNPERSKFTSVLYSVLSPTLNPLIYTLRNKDVKLALGRILASFSH", "length": 318 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ADX2-1", "protein_name": "Olfactory receptor family 4 subfamily A member 80", "gene_name": "Or4a80", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQSKIVTEFVLLGFTQDPAGQKALFVMFSLMYIATMVGNLLIVGTVIVSPSLGSPMYFFLASLSLMDAVYSTAISPKLIVDLLREKKTISFRACISQLFIEHLFGGVDIVILVAMAYDCYVAICKPLHYLIIMNRRVCILFLVMAWAGGFAHALFQVLAVYNLPFCGPNIIDHFGCDIYPLLLLACTDTYLIGLTIIANGGAMCIVIFILLLLSYAIILRSLQNHSQEGRHKALSTCSSHITVFFLFFVPCILMYVRPVSSFPIDKSITVIYTVVTPVLNPLIYTLRNSEMKNSMEKLLQKILSPNRLRLLCCLYY", "length": 317 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AEJ6-1", "protein_name": "Peroxisomal biogenesis factor 11 gamma", "gene_name": "Pex11g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLNGLASALESYRGRDRLVRGSVGPWRDRSDLEFGQDSEMRKTGQRGGPKGTDIGRLVSYMRTSYLSLPNCWPYKCVLALQIRTLGYGCQLIGGVLVEQCPSRSEVGRRLLVVSAQLSHCRTVLRLFDDLAMFVYTKQYGLGAEEEDVFIRWLSVLSNMADQLYYPCEHVAWAADAKVLQVDSARWWTLSTAFWSLSLLLGAVKSLWTMLKLRQKLRSPTGHFASQLPRSKWRAVEARIWSEALTLLSNLADLANAVHWLPPGVLWAGCFPPWLVGLMGTISSILSVYQAARAGKQAEVDSP", "length": 304 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D6R901-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 21", "gene_name": "USP17L21", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "E0CXP6-1", "protein_name": "UMAP1-MVP12 associated (UMA) domain containing 1", "gene_name": "Umad1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFHFFRKPAESKKPSGPEPEADGFVLLGATANEVRCKTSEAEGSQALETGKEDTSSVTVSGPETENQTGQTLQNNSLTAELLSDVPFTLAPHVLAAQGTISDLPDHVLSYDVGDNLSRFWYDFTLENSVLCDL", "length": 133 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E0CZF1-1", "protein_name": "PRAME like 34", "gene_name": "Pramel34", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGQTPPTHTLLTHEALIMSSLEELPTVVFPALFKEAFAGRHTNLLKAMVAAWPFPCLPVGPLMKKPNLETLQALLDGIDMRLTREFHPRRAKLQVLDMRNMYHAFWNIRADANDSDCKSKTLDEKQLVKVLPRYARRQRLKVIVNLSISSHFNKSKAYFLNWAKQRIGSLYFCCIKMRIWDPPDQVIRDIFNVFDPEHITELELNTDWTLLQLAHFASYFGHMKNLQKVFLAPLHKNTSPIINITNATEAKCVHKIISQFSQFNCLQHIFMKHVHFLRDYMNQVLGCLMTPLETLSITQCLISQRDFDLFSCSQNLFKLKHLEIRGMILYALDLMPLRVLLEKVADTLEILDFQWCRMKDSQINALLPALSQCTQLNQINFYNNDFSMCTLKALFQHTANWSKMNVEQYPAPLQCYSELGHVSVERFVQLCQELMYTLRAIRQPKSISFATDNCQKCGKPCVYDQGPILCSCFQ", "length": 475 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E1B8K9-1", "protein_name": "40S ribosomal protein S6", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKLNISFPATGCQKVIEVDDERKLRTFYEKRMATEVAADTLGEEWKGHVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKCKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPHRLGPKRASRIRKLFNLSKEDDVRQYVVRNSLNKDGKKPRTKAPKIQRLMTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK", "length": 249 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BBD9-1", "protein_name": "RNA polymerase II subunit A C-terminal domain phosphatase SSU72", "gene_name": "LOC112445820", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPFLPLRLAVVCSSNQNRSMEAHNILSKRGFSILSFGTGTNMKLPGPARDRPNVYDFRAMYDDVYKDLLRKDKERYMQNGVLRMLERNMEKEMPRPERFQECKDLFDLILTCEERVYDQVVEDMNSGEQETCQPVHVINVNILDTNKEATLGAFLICDLCQCVQLMGDMEDRIGELLQAFEEKSGRSFLHTVCFY", "length": 195 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BLY1-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIIRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLSSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E7F638-1", "protein_name": "Moesin b", "gene_name": "msnb", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSINVRVTTMDAELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYQDSKGFSTWLKLNKRVTAQDVRKENPLLIKFRAKFYPEDVAEELIQEATQRLFFLQVKEAILNDDIYCPPETAVLLASYAVQMKHSDYNSEHHIPGYLCRDKLLPQRVLEQHKLTKEQWEQRIQVWHEQHKSMSREDAMIEYLKISQDLEMYGVNYFSIKNKKGSELWLGVDALGLNIYERSDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKSPDFVFYAPRLRINKRILALCMGNHDLYMRRRKPDTIEVQQMKAQAREEKNKRQQERALLENEKKRRENAEKETEKIARETMELMERLRQIEEQTKKAQEELEEQTKRALELERERKFAQEEAEKLEKDRRIAEDVKTALLQQSENQTKNKDNLATELAELTSKINLLEDAKKKKEDEARKWQRRAIMVEVDLEKTKEELKSKLIGVHIQATSQTENDHDENDESSAEASAELTSTGSFRDRSEEQRITETEKNEPLQKRLQALSSELADARDDSKKTANDLIHAENVRLGRDKYKTLRQIRQGNTKQRIDEFESM", "length": 577 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FA22-1", "protein_name": "Protein tyrosine phosphatase type IVA 3", "gene_name": "ptp4a3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAWLNGLYPVEVCYNSMRFVITHNPTNQTLDTFIEDLKRYDAKTVVRVCESTYDKTPLEKHGITVMDWPFDDGAPPPTKIVDDWISLLKKSFSEDPGCCVAVHCVAGLGRAPVLVAVALIEGGMKYEEAIHLIRLKRHGAFNSKQLTYLEKYRSKKRLRFKDPFKHRSKCWLM", "length": 173 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FE27-1", "protein_name": "Beta-1,4-N-acetylgalactosaminyltransferase", "gene_name": "b4galnt4b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMRFPLKKIRKQFKLLLLLVLLMFAIGFTYLHINQGKAIKLHFNYGKDMERQAEGIGSSPKKHLSSSINPFEHGDAADSQEDGWGGEELNESAQESRANAEMHTLLAQKFLGLPWKPEYKGQANLHVFEDWCGSSVSQLRKNLHFPLYPHTRTTVKKIAVAPKWKNYGLRVFGFIHPYKDGDFQFAIASDDNSELWLSSDESPLNARLLVYVGQHGSEWTAPGEFSKFRSQTSKPVRLMSSRRYYFEVLHKQDDRGSDHVEVGWRPFLPGQKFDVIDSAYISLYTDESSLKMNSVHHIPQTLASHSLALQIYHRTETHTADMLKPDPRDTFYKIPMIDQSRLENVLPSCVYSPTYVVKDFPIARYQGLQFVYLSYVYPNDFTRLTHMEKTNKCFYRESPVYLEKFGFYKYMKMDEEEDDQPVFFPKPDDFLEEEEGVDPEEAINSSNRPVKRSGPSYQTSRITAATASSKPDRLDGGSKSSVFQQEKQYVQFKEQERSKKRTKGERFYRHSQVVDDEMTEIRQVKGSTGVLESQSGSLNEQTGPSEENGDSQTLSLVQRGRSLAWVLPDPALQSESKLIETASPTVKERSPFKLPHLYVLANRILGNAGKPVVEKESNSNKIYITRPRPPVSRPKPPVEVFPGVFLYQSRKSKRLVDLSSKWRSLKTQAAASAPWANFPLMDHKTSTQSALLKQSHLSSPTEPGPHNKGDPTASISDPDSVPPSSSEKRDHPGLNSSSQPPEEEPTKISEMAEGLDVAPQSRGLEEGEMSEYSYEEAEVRPHLAEEAINWQRTFSVNPVDFELLRSDWNDLRCNVSGNLQLAENEVIDVISQFMERLNERNRGIYTLARIVNVEKRRDSARGNRYLVELLLMEGGKRLVRLSEYIYLLLHRSRFEEGIESREGTVPSSHRTPSKIPLPSGSSAQTHTTTPWSTSWAKPLLCQPIMLQWRHDVMVHFVVPVKNQARWVQQFISDMELLHRETKDENFSVIIVDFQSDDMDVEQALKESTVPRYEYLKREGNFERSSGLQMGVDTIEDSHSIVFLCDLHIHFPHNILESIRKHCVEGRLAFAPIVMRLDCGSSPLEPDGFWEVNGFGLFGIYKSDFDKIGGMNTEEFKDHWGGEDWELLDRVLQNGLEVERLRLRNFYHYFHSKRGMWNVPVKRASQG", "length": 1167 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FFR8-1", "protein_name": "Ubiquinol-cytochrome c reductase complex assembly factor 5", "gene_name": "uqcc5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLRKSQNLKYMLSLVPGKKRFGVYRFLPVFFCIGGVMEWIMINVRIGRETFYDVYRRKQSERAYQQKTEEGLIMLTDSQAK", "length": 81 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9PUW9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r143", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PUZ0-1", "protein_name": "Apolipoprotein L 11b", "gene_name": "Apol11b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWNEISEDIRKVECRTFEKVIDNATEDLITDLRSLITEDGAWNGFVEAVELSSEEGEALRDALKERLAQDPTDENDRPQREQQKERFLREFPQLKKKLEDHIRKLRDLADKFDQVHKDCTISNVVSTSASAASGVLALLGLVLSTVTAGASLALSASSVALGATSSVSSFTTTVVEDSMTLSYESEARNLIGASMNVLEEILSIMPKITCKFYNTVADLVKAFKTLKGQIQTIRRARSISRRGAQARNLTSTGRSSGQGVSQMTRGARIRAGVFTSVFLGWDVYDLVTKQRICMMGEKQSQVEHCGTWLASWRRTFRNLSRSTMLCSQTCLSDALP", "length": 337 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PV04-1", "protein_name": "Eukaryotic initiation factor 4A-III", "gene_name": "Eif4a3l1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATTTRMATSGSARKRLLKEDGMTKVEFETSEEVDATPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIMKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACVGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLTTRAIKMLVLDEADEMLNRGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTNKFMTHPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCITKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNLADLI", "length": 411 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVP9-1", "protein_name": "Predicted gene 4884", "gene_name": "Gm4884", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSENLQSSPFFGTESTLHPSLPLLSNSKQPAGTVCNFSRVSTPDVSSAWLLPSASSTSLQPLMVVQMETSLGLPPSGQTYCQLQSPELCNTCVQVSQIRPPAVNGDKALTAPIHSPSQFLALPPAPSLEQPENKTMPEIKEGTKENQDTPVLTLEHPDLQQPLHCTDTESLRQKPDSDNAHLGCICMGPKELVGLENEIGSSFDFKDITRFGADIQLPQLLNTLTDIDQDQSCENWRVTSGLFDQVRENKHKSFELLEGAPQAKFQHWDLVEGEGAVGVAGASDRAIDNMAKHPEGKAPKGPPSKNRRARKQEQERPSGPENKSKKTQELKQSRNRVKAEKEPSIPKTKRKRNPPELSQNSFKKPRTNLAMHMLESVQVFHPLGKKSEKKTGISSFRGLRTFTSNKDSGPGSVTTTVLNMPCESQGPPKSPGKVQSAESSVGKDCLSPSQYELPPAGKVKLVPLPFPTLDKPQSRPASRKPLSLALRRPTAVYPVQHHSHSVQPTTLRPAQPPPASSSLIASAKPAPPISSSATGPNVTNPNQSSAVPQLATSRPVPYRASSHTSFQRELVSAARNKVPSPPRPVPYRASSNTSFQRELVSAARNKVPSPPKPQTQYLLHDFSRQPIPWKKVDILGPVVSQPITKEQRPEREAMKRRSQQERENAVKNPSTGKLQIFLQRERDMEISQYYGYAM", "length": 694 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVW0-1", "protein_name": "Major urinary protein 8", "gene_name": "Mup8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCVGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKVHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNAMDLVPEHVLVLTRQIAASRPENEEWPEPPVLSGDFSPGLHHHPFLSIQHPQYKFCDLHSILSH", "length": 235 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVZ7-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKYFCLPRFSIISMLTGNGSFVTEFVLAGLTDRPELQLPLFYLFLIIYTVTVVGNLGLIILIGLNPHLYTPMYYFLFNLSFIDLCYSSVSSPKMLMNFVFEKNSISYEGCMTQLFFFLFFVISECYMLTSMAYDRYVAICNPLLYKVTMSPQVCSMLSFASYGMAFAGASAHTGCMLRLIFCNANVINFYLCDILPLLQLSCTSTYVNEVVVLIVVGINITVPSFTILISYVFILANILNIKSTQGRSKAFSTCSSHIMAISLFFGSGAFMYLNHSGSMNQGKISSVFYTNVVPMFNPLIYSLRNKDVKIALKKVMMRVHSRFIS", "length": 325 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW18-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r257", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW59-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b50", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALANGSFVTEFILLGLTDQPDLQMPLFLIFLIIYLITAFGNLTLIILIVLNSHLHTPMYFFLFNLSFIDLCYSSLITPKMLMNFVLEKNIISYMGCMTQFYFFGFFAISECYVLTAMAYDRYVAICNPLLYSVAMSPKMCSYFILGSYFMGFSGAMIHTGCVMRLTFCDGNTINHYFCDLLPLLQLSCTSTYVNEIELFIVTGKDIIVPTVIIFASYGFILSNILKIRSTSGRSKAFSTCSSHIIAVSMFFGSSAFMYLKPSSAVSMNEAKFSSIFYSIVVPMMNPLIYSLRNKDVKVGLKKTLSRMFSHNLISL", "length": 316 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXC3-1", "protein_name": "Cytochrome P450, family 2, subfamily c, polypeptide 69", "gene_name": "Cyp2c69", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDPFVVLVLCLSFMLLLSLWRQRSARRNLPPGPTPLPIIGNYHLIDMKDIGQCLTNFSKTYGPVFTLYFGSQPIVVLHGYEAIKEALIDHGEVFSGRGSFPFFDKVSKGKGIGFSHGNVWKATRVFTVNTLRNLAMGKRTIENKVQEEAQWLMKELKKTNGSPCDPQFIIGCAPCNVICSIVFQNRFDYKDKDFLSLIGKVNECTEILSSPGCQIFNAVPILIDYCPGRHNKFFKNHTWIKSYLLEKIKEHEESLDVTNPRDFIDYFLIQRRQDKGIEHMEYTIEHLATLVTDLVFGGTETLSSTMRFALLLLMKHTHITAKVQEEIDNVIGRHRSPCMQDRKHMPYTNAMVHEVQRYVDLGPTSLVHEVTCDTKFRNYFIPKGTQVMTSLSSVLHDSTEFPNPEVFDPGHFLDDNGNFKKSDYFVPFSAGKRICVGESLARMELFLFLTTILQNFKLKPLVDPKDIDTTPKYSGFSKIPPKFQMCFIPVE", "length": 491 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXM9-1", "protein_name": "F-box and WD-40 domain protein 24", "gene_name": "Fbxw24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLSSFPMMEIFSYLDAYSLLQVAQVNKNWNALASNDFLWRKLCQERWLFCDMVTLQLLGKETWKQFFVYRTWQEHVKSRAIPEDFTYKEIPLECGVRGYAGYISGCALTRNGQGKSVVCMVSSKNKISTWDISESVITWVSPVQPASIKLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLAGDILGNLYIFRIPDLHLISTVNVFPCGFDKIDCSPQKKWVLLSQNHPCIYPKVFYMSSLLRTSEFSDPVSTVLEFSLCKRAFWTPRREDRITLMSRRGRPIVTRFETFDMKLEENGNKTIVKGDLVASFSLQDYNENPKWMGVSDKSVIVCSTGSSLLLFSMKGLHLQTFQYSPEMIVRLWVDPVHVIITCNDGSIDVYMWEERSLLLKMCYRLQNGRHLPPFGFIKNLLCDDVSIVQLMIDRQGPCFLMAYTLNICS", "length": 466 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q069-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r157", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCHFEVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q0V3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r68", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGVAIIKENQTQSKMDFWNMGIKILFLSQTTTGILGNFSLIIYYVVNYIVHTLKPTDLILMHLMTSNALMVLSTGVLHTMAAFGLAHLLNDLGCRLILYIQRVGRSTSIGTICLLSIFQAITISHRVSCYKGQKIKSSKYIGYSISLLWVLHMFLNFILFVDIFIKRNRNNMTSDRDFKYYSIVERNEFSDSLYVALVVCPEIFSSVLITCSSGSMIGILYRHKQRVQHIRSFHVSSRNSPEWRATQNILVLVSTFLAFYTLSSVLQGCIALLNNPNWWLVNITRLTSLCFPTFAPCVLMSHYSFMPRFSLVWTWNKTS", "length": 319 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1C7-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A2", "gene_name": "Speer4a2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWMGETREGRKDADLPSKSNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHNLEMENMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIHQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 252 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1N7-1", "protein_name": "Predicted gene 8126", "gene_name": "Gm8126", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNRNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKITQSINDTIEKYKEFIEDKDSYSFMHTYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEENRFCHESSKNIHPKY", "length": 198 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q328-1", "protein_name": "RIKEN cDNA 5430401F13 gene", "gene_name": "5430401F13Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASSRILLVLLSIALLALTSAQRVNEDDGSALQEEDALEIGDSNQQHDDIHERLNEIKNHFQDQISQHGKEAIKSKKGKNGPRSRRSSDDDNLEVQDHQSGNEQAGGGQGGRGRSELKGQNGKGSQKGKKGKGGQQEQKGKGGQQKQKGKGGQKTKRGKGGQRSQQDNVQEVYQE", "length": 175 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q346-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r160", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSKLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q366-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4f2", "gene_name": "Speer4f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTMCVRLRRLFQRANVDGRETREGSMDAGLPCERNEGRRRWTWRMWMAHRQTSSPVPVTSNQFEKEEEELMEEIQLISQEKNGLRDYLNLTLGSKITRLNQSYEELKLKQKELMTLQHDLEMATMEAREENEELKKEINFYSNLHSRALMENNLIKKKLMTLQQESKEVQAEWASIQQHLDVNLSGKDEQENNSILDTQEHQVSETARELGLATDQEDSILQDELPPQEAPAEELSPQEAPAEELPPQEAPAEQLPPQEGPAEELPPQESPAEHHLQHPQSFSDESSYITYPEWE", "length": 295 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q3G0-1", "protein_name": "Zinc finger and SCAN domain containing 4B", "gene_name": "Zscan4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPIPDNAQMPVDTTQDRLLATGQENSENECNTSCNATEVNVGESCSGNEKDSLLITQKEQNHEHEEGNVVCQFPRGARRASQDTSSHHVDFPSALTPADVPMEEQPMDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKTDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQPISDPVLGKNHEANLPCESHQKRFHRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCITCQKIFKRVSDLRTHEIIHMSEKPFKCSTCEKSFSHKTNLKYHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 505 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q4E0-1", "protein_name": "RIKEN cDNA 5031410I06 gene", "gene_name": "5031410I06Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q501-1", "protein_name": "Predicted gene 2237", "gene_name": "Gm2237", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENVDEGETRPTEKEEGILSHEKGRRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSPAESRTWH", "length": 211 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q5G7-1", "protein_name": "Oogenesin-1", "gene_name": "Oog1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGYIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSAGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFSLGDSEKLDEETIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPYCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELDSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPLECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVELL", "length": 496 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q6D7-1", "protein_name": "RIKEN cDNA 1700024B05 gene", "gene_name": "1700024B05Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESHDNPVSAGRTSSQNCNITNHMKNMNKLDDMKFYIRKINAELEELFRILDIDMNTDLNYRMNTEFTIIKSQHEKTMLDMEKMKQSISDSIDKYKEFIEDNDSYSIRHTHLLKECNQLKEKVRMLLNENRKLLVEQADQEASFGEEKSSVMRPARTYIPSAKQQQL", "length": 167 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q7M8-1", "protein_name": "Predicted gene 5796", "gene_name": "Gm5796", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQSGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8A4-1", "protein_name": "F-box and WD-40 domain protein 28", "gene_name": "Fbxw28", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSVPMMEILSYLDAYSLLQAAQVNKNWNELASSDVLWRKLCQKRWLYCYMFTLPLHGLETWKQFFFDKTWQEHAKTRAKPEDFTYKEFPVEFEFRAHPWYISRHGLTRNGQEKSAVCMTSMNRISTWDIHEGAMTWESPKQPSYIVWMTTLPEMQIAVTIDMQSTIKLWDCHNKEVLASKTGLFFGCKLLQSEFTKDGPIVLVGDACGNLYIFRIPDLHLISKVNVFPYSIDELYFSPQKKWVFLIGHRLNDLTKVFYMSSLLRPSEFSAPVSTVLKVPVIRKVFWTPRREDRITLMSLILPKNITKFDTFDMKLEGIGNKVTIQGYLTASFSLAEDEGRPDYFGVSDKDVIVCSTRFSLLLFDINGLRLQTFHYCPEEIWRLWVDPVHVIVTCDAGSLDIYAWEKRSLLLRKCYRLRNRNYQQMSGYIIKTLCDDMSIISVANNSPKPCCLMAYTLSVCS", "length": 466 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8I6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r55", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDLVPKNPPTDLKCKLAHFFHMVARGTNMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVRYSCYSCWLFSVLNNAYIPMNVRGPKKSHNDSDSQGKRMCSISVVNVDMNYLQFSYDIIFIGIMVWTSVSMVIHLNRHHQRMHYIHNPNQSNRGHAETRAAHTILMLVVTFVSLYILNCICVLFHVSFVESRRWLRNVIEFLALSFPTISPLLLIFRDPRGPCSLYFNVGLEIHVTGKVITEEQ", "length": 310 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8L6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r132", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8T0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSFKNVLYFQTGLGVLANTVLLFFYVFIILGHRPKPTDLISCQLSFVHIMVVLIGGDILLADIFESLNIGNDFKCKTTFYLFRVMRGLSICITCLLSVFQAVTISPNTSVLAKFKQKVKKYMTHVFLCIWFFNLSFSTNQIFYVGGFTNVSETNQMQVTKSCSLLPMNYIIRGLIFTISISRDVFLVGVMLTTSVYMVIFLFRHQRQCKHLHSFSHPRESPEKRATQTIMLLVSFFVVLYWMDFIISFTSEMLRMYDPVILTLQKFMMYAYPTITPLVQISSDNRIIIMLKNIQSKCHPSFSLKDFFFFI", "length": 311 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8V7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r173", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSALNKALKTTEEVALQIILLCQVGIAAVANILLLVHNLSPNFAGPQLRPKHVILAHITVGNLLIILLTGFPSNIIVFVPRNPLNDLNCKLEYFIRLVARSANMCTTCVLSTYQFIVLVPGKWSRMILRGNTSTFVHYSCNSCWIISVLNNVYIPIKISGPWNTDNDTDLNSKWVCSMSGFELVMVFLRFVHDTMFISIMVWTSVSMMLLLYRHHQSLKHIHRSNGSLGLQPEARAAYTILMLVVTFVCFYLLDCMCIFFHISFVHFRVWLRHVNEILAASFPTLSPLMLIFRGPKKISAKGINTENAFINSH", "length": 313 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q9N3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r152", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFASKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFGSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAETRATHTILMLVVTFVRFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QAN3-1", "protein_name": "Predicted gene 1979", "gene_name": "Gm1979", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPPESNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QD93-1", "protein_name": "Granzyme K", "gene_name": "gzma", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDICRNLIVFHFLVFTFFKVTVCSDVSIVGGKDVKKALSWMVSIQVNQNHKCGGILIHKEWVLTAAHCKEDSYSSVTVLIGSLSLSKGSQRIAIHNYEIPETFNKKTKKDDIMLIRLSKKVKAKPYKIPKKEKDVQPGTKCVVRGWGTTDYKGKQASDKLQMLEVLVVDRVQCNRYYNRNPVITKDMLCAGNTQQHRGTCLGDSGGPLECEKNLVGVLSGSHGCGDPKKPTVYTLLSKRHITWINKILKQQFNSTRF", "length": 257 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9QLQ1-1", "protein_name": "Defensin, alpha, 35", "gene_name": "Defa35", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHDELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F1LPT0-1", "protein_name": "Gap junction protein", "gene_name": "Gjc3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCCSFLRQLLARESQHSTPVGRFLLPVLVGFRLLILVSSGPGVFGNDENEFMCHLGQPGCKTICYDVFRPLSPLRFWAFQVILMAVPSAIYVAFTLYHVIGYWEVPGRNKEQEAQICKGGRCKDVSGAMSLKLLWAYVAHLGVRLVLEGAALGVQYHLYGFKMPSTFICREDPCIGSTTCFQSHPSEKTILLNTMFGISGACLLFIFLELVLLGLGRVWKTYRHKLPLFKNLSTSERSVRHKDTTDDLSVVETKEPF", "length": 257 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LT33-1", "protein_name": "Cytochrome P450", "gene_name": "Cyp2b14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVFLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFIDTYLLHMEKEKSNHHTEFHHQNLVISVLSLFFAGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVISSHRLPTLDDRIKMPYTDAVIHEIQRFADLAPIGLPHRVTKDTMFRGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDANGTLKKSEAFLPFSTGKRTCLGEGIARNELFIFFTALLQNFSLASPVAPEDIDLTPINSGAGKIPSPYQINFLSRCVG", "length": 495 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LYQ4-1", "protein_name": "Alpha-1-B glycoprotein like 1", "gene_name": "A1bgl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLLVLLEPLASLTLTCKVCEPSKDLHRILHLSSMETACTLSLALPPTLPSASLIFSASGVHTLILLRVRLNHSLILLSLIHTGPLPRPWLSANPVPWITPGLRTFLLCQGTVRDVVFMLRREGDDGNKEKEQGIFQVHEPGNYSCNYYTNTEYTPSKPSGTVTIKEYVIPPPPMLTSLESSTVDEPEMTQMSLLCVAPLSDVEFQLRQGEREMKVLIVSTSPERASFYLKLSDMGDHSPFTCRYRLNRMTAWSEDSKPVQLMWSDETLPEPVLTVEPSPHQSFEPGSTVQFRCTAPKAGLRSEAGLRFGLHLEDLYDHRLLQTQKSSGNETVFQLRNVSATDSASYSCIYTELTPPYSGSAPSDFVILRVNGPPPPPKLQALWTGKVFAGHDVVLRCQSDVTGVIVELLRDGKFVPYRILRVLNNYSDLGLHSVGPQHTGNYTCRYTSWLPEPVQSEPSNPVELLVEGMASGVVVVGFCLLIFPGLCILVNCAI", "length": 495 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M6N1-1", "protein_name": "Zinc finger protein 945 like 1", "gene_name": "Zfp945l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTASLVNVSKCLLTFRDVAVEFSMEEWECLNYSQKTLYRDVMMENYNNLLFVENHCKYKKVLDQDPNSIVHNVNIYEKAYECNELVKMTHESSQGTPFKTKHKDASLQISTLNRQKIGNTRDEPCKFKDCINFLNVFVIRQNQRIYIGEKEPTTIEYENHYNSKHEVMLKQSNSTGNKPHIFRKYGQCFKIYSSFSRYQNDHTSEKFYKCIKCRKSFLHLSQLKVHYKIHYRKYPCKCTACSKCFYHTFGFKRHYSIHPEVNTYKSSDCDKSFIYYSSLRKHQKIFGGERHYECNEGLRSLYTVFQPVYYYIPHIGEKAYKCSECEKCFTRKYHLTVHQRIHTGEKPYKCGECDKCFTRKYHLTDHQRIHTGEKPYKCSECKKCFTRKYHLTDHQRIHTVEKPYKCSECGMSFMKKYHLRSHQSIHTGEKPYNCSECDKGFTYKGHLRRHQKIHTGEKPYKCSECAKCFTENSKLRRHQRIHTGENLYKCSECDRCFIENNKLRSHQKVHIGEKPYKYSEYDKCLTQKGSLRSHQLIHTGEKPY", "length": 544 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M7A9-1", "protein_name": "Large ribosomal subunit protein uL6", "gene_name": "AABR07026048.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MANRLAHRPIQWRNFLSQDSLDQDTMRKKTILSNQTVDIPENVDITLKGRTAIVEGPRGTLRRDFNHINVELSLLGKKEKRLRVDKWWGNGKELATVRTICSHVQNVIKGVTLGFCYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVWMRTNVACSVSQAQKDELILEGNDIELVSNSAALIQQGTTVKNKDISKFLDGIYVSEKGTVQQADE", "length": 219 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M9J5-1", "protein_name": "Uncharacterized protein", "gene_name": "Esp1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ITFLPVTLFLIILLWPSMITEGRVLTQNQKELSISADHNKNHKSDLDKIEFQGQPNIQKAVEMTICASDKDQTLLEDQANANQDKQLYKDSHLLCGRSLDHIVK", "length": 104 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1QDL3-1", "protein_name": "Novel nacht domain containing protein", "gene_name": "LOC560232", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEDKHTPGDLDLSTGCSSVHQNRAEAEPSCVSMKSDVSMDPPTNFKSGNTGPAVSSRKRKRAEAEPSCVSMKSDASMDPPLKFKSKNTQPAVSVDRDDQSGDLLQDSLQPEHDELQRVKEQHKTTMKNKHERLFEGINHGETQTLLNRIYTQLYIIEGESEGVNEEHEVIQMEKRARTKPSQHTPVYCNDIFKASAGAGHEVKIKKEKAQIKTVLTKGIAGIGKTVSVQKFILDWAEGKANQDVDFMFVLPFRELNLIRDHQYSLHRLLLDFHPELEDLEPKIYEQCRVVFIFDGLDESRITLNFSDEEKVCAVTESSSVAVLMWSLLKGDLLPSALIWITSRPAAAHQIPSRYIKRLTEIQGFTEPQKEEYFRKRISDEHQASRIISHIRRARSLQIMCHIPVFCWISSTVLQKLLEEDVSAEIPQTLTEMYIHFLLIQINMRKQKYEERDPEKLLQSNRGVILKLAEVAFRQLMKGNVMFYEEDLIESGIDVTDALVYSGICTEIFKEESVIQQRKVYSFIHLSFQEFLAAFFVFYCHLTKKRELLELILGYSYDQYLQSSSEKSLYDLLSSAVDEAVRSSNGHLDLFLRFLLGVSLESNQRLFQDLLTHTEESSESIRRITQYIKDQIKSDDYFKRAAERFINLFLCLLEVKDQTLAREIQEFVKSDKHSEEELSPAHCSTISYMIEMSEEPLDEFELQKFNTSAEGRLRLTTAVRNCRRAL", "length": 725 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QGM0-1", "protein_name": "Galectin", "gene_name": "lgals1l1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPTVLIQNMAFKVGQTLTLTGVPKPESPEFTIDIGNSSEDIALHINPRFDAHGDQCIIVCNTFQNDCWCEEHRDENFPFVQGEEFQIKITFTNEEFLVTLPDGSEINFPNRQGSEKYKYMNFTGQARIQGIEIK", "length": 134 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QMQ9-1", "protein_name": "Uncharacterized protein LOC541480", "gene_name": "si:ch1073-398c20.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MADIKQESDDIRIAEVFTLKQEDPEEQTDLLPLRKEFQGLDNVKEEEALVEEHQDITPAEKRITCSETENTTQKASEKTGSRSSFTCEQCGRDFAKQGTLNNHMRIHTGEKSFTCQQCGKGFTQKRTLRNHIRFHIEAESLSCQQCGESFTQKQDLTDHMRVHTGEKSFVCDQCGKVFLRKDGLEKHLKNHHKEKPHVCPCGKSFTDKTKLEEHTKTHTGEKPHTCDKCDECFSGKYDLIRHMRFHSAETPYICQQCGKSFALKRVLMTHVKIHTRDRPFLCKQCGKCFYRKDNFNRHVRVHTGEKPYACSECGKSFSERFQFNEHSRTHSGVKRFSCEQCGRGFNRKTELKRHMRVHTGEKPYMCPQCGKTYAFKTGFDIHMLHHNAEMPYICPQCGERFSVKQRFDVHMKIHAGNSDK", "length": 420 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1R1Q6-1", "protein_name": "Uncharacterized protein LOC641576", "gene_name": "zgc:152710", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLIWTQFGVKHKNVKCKVRVIHGEEGSWSSEEVREEPEVSSPPPSPECVDYYSVLGVSNDSNEEEIRKAYKRLALRYHPDKNSDADAEDKFKQIAQAYDVLTDPEKRNIYDQQGLTKGGVAPTCNKTDPSHNSKADAHSWHMFFNFDLDSDDDLFNPFTRNPLPHLSRHHGNKGGLKPAGDAEVHDLSVSLEDILMGVTKRVKLTRLRQTDKHTLKPEERVFDVEVKKGWKEGTRITFPNEGHQMLGHAPNDLAFVIKEKKHAHFRRDGSHIVYTCTITLREALCGCTVNVPTLDGQMKPLPCSDVIKPSSVRRLIGEGLPRAKNPAQRGDLLVEFQVVFPDRIPPSSKEIIKHSLGQC", "length": 360 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RA39-5", "protein_name": "[F-actin]-monooxygenase mical2b", "gene_name": "mical2b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGETEEERTSQAGQLFENFIQATTCKGTLQAFSVLCRQLELNPSDHRGFYSSLKTAVTFWKAKGLWGKLDKRAGHKEYSKGRACADTRCLIIGGGPCGFRTAIELALLGAKVVVIEKRDTFSRNNVLHLWPYTIHDLRNLGAKKFYGKFCAGSIDHISIRQLQLMLLKIALIVGVEVHVNVEFVKLLEPPEDQSTDGQGWRAEIRPADNPVSDYEFDVIIGADGRRSTLDGFRRKEFRGKLAIAITANFVNRNTTAEAKVEEISGVAFIFNQKFFLELKEETGIDLENIVYYKDNTHYFVMTAKKQSLLDKGVIINDYIETERLLAFDNVNQEALLSYAREAADFGTNYQLPSLDYAINHYGQPDVAMFDFTCMYASENAALVREKSHRQLLVALVGDSLLEPFWPMGTGCARGFLAAFDTAWMIKGWAQGKEPLDLLSERESIYRLLPQTTAENISKNFEQYTIDPATRYPNLNSSCVRPHQVRHLFISGEQDLSSLERSGQTRRSVSISRRESEVRPGRLLLWCQNQTQDYRGVNVTDLNTSWRSGLALCALIHRQRPELIDFDSLNEADCAKNNQLAFDVAEREFGIQPVTTGKEMDAERGPDKLIMVLYLSKFYEMFHKSTQSVTGLPKEIDANNGDCSSKTANSLYNSINHARKRIPKLDKKLEESDVNRKRKKASSHHEELMSCQTAPPAGEREEQKENKVRSMATQLLARFEENAPSCALRRQSDSESDSDADRPVSLDLTENPRFARPKIEPTHPSTTPDKAKWQPSPYLRLLESNTRSETLHTEHYVESQSSHRLTEIQSECQYSSVSSAYKSSERRPRSPLIPFTPTLSPMMHCLQQLEEQVIQQRKREPLNRKSIKERAQKLSSLFTGNPAQPQTDESSPAVSPSSPPQTIPESSTLSCLLSPAPSLTHKQCSEASETHLKADKHTEIRRVERLDPSKQRTVGKVSSAIGVKAATLAILYETDHRPNNPITLSLTEARRCAESGLVSVRKEFSASLGGSDTCVFCQKRVYIMERLSAEGFFFHRECFRCHICGCSLRLGAHTFDSQQGTFYCKMHFSQRKTSTRHRRGEIQDGGIRSSSITISNHTSTDGTRGQPSGGEFDSSTQQDLQTLPDSKEIISVSEVKDSSKKADPADSAPACPDSPLQKVKRSTAKGEITNKNILWKKKIRSTLPLVLMKKFHRGKPEDKTEVLAEEDGNSDFEEIHESLSSKKPSNPSTDSNCLPTKDNSSTPLDEIPKIPLYRTHVLPEYPKPSSSSPEPIVTSISSDPISFSPKKKLTLSLSEKEKLLNWDLTNPGKSGAEEQQQQHVKPSISLQHDHPEPTHPQPEPAPPLFGFQQWANNLRKSFSKGSNPVVLRRNRPMKARPLSEGSFNVGAVFQDEERCGSLVDEGEARPRTESEIASLLEQVALGSKTSRGTKDDMASLPPRKLNFFSSLRIKRVEGAEQSRGEGQKDILSILSRFRNKASAQQQQQQKSNSSSEDEQEPKLTHSGALQKKKEKIAIRQTKSDELKRLHRAQVIQRQLEEVEEKQRSLEEKGVALEKVLRGENGDDGSTDEAALLQTWFKLVLEKNKLSRYESELMIFAQELELEDTQSRLQQDLRRRMATEDCEKSASELVEEQNILVEIMKVVEKRDKLVSLLEEQRLKEKAEDRDLESLILSRGYQFHWT", "length": 1679 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RXL1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152495", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFTICNDSHSDFILLGFSDKPYLEKILFWVVLIFYCLTIIGNLVIILVSLKDPKLHIPMYYFLSNLSLLDLCFTSSCVPQMLVNFGGPEKTISYIGCAIQLYVFLWLGATECVLLVVMAVDRYVAVCHPLQYTTIMHPKLCLELAILAWGTGLIQSLTQSPATLQLPFCSNRRLYDIVCEVPALIQVSSADTIYNEIQMSIASIILLVVPLVIILSSYGAITKALLRVKSTEGQKKAFGTCTSHLLVVFLFYGTVTAVYLQPKSHYAHEQGKFLTLFYTVITPTLNPLIYTLRNKEVKGALIRLGKKTWDDLCWTIA", "length": 317 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD0-1", "protein_name": "Transcription elongation factor A like 3", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRQVKHLRSGSLPTPGLSVTSPSPTARPATPRTACLFPALCKTRKGEGTCPESLQDKKRRKNLNMEKLCKENEGKPESEGKPEDEVEPDNEGKSDEEEKPEVEGKSAHEGKLQNEGQPEDEGKPEDEGKQEKQGKSEDEGKPPGEGTMESQAKPESEPRAAEKRPAEDYVPRKAKRKTDRVTDDSPKDYEEDLQERHLGSEEMMREGGDLSRAQEELRKRQKMGGFHWMQRDVQDPFTPRGPRGVRGMRGGGRSQRGLHDIPYL", "length": 264 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "LLVVVLVTYLLTLVGNTVIILIASIDPNLKTPMYFFLTHLSLVDICLTTSIVPQLLWNLRGPAKTITTLGCAVQLYVSLALGSTECVLLAVMAFDRHAAICKPLHYAAVMNPRLCQALAGVAWLSGVGNALIQSTVTLWLPRCGHRRLHHFFCEVPSMIKLACVDIHTNEVQLFIASLVLLLLPLALILTSYGHIVKAVTRIKSVQAWRKALGTCGSHVMVVSLFYGTITAVYIQPNSSYAHTSGKFISLIYTVLTPTLNPLIYTLRNKDVKGAMRRLFRRDLGS", "length": 285 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S4M2-1", "protein_name": "Small ribosomal subunit protein uS13", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSLVILEKFQHILRVLNTTIDGWQKIAFATTAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVEHVITIMQNPGQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLHEDVERLKKIRAHRGLRHFWGLRVGGQHTKTTGRRGHTVGVSKKK", "length": 152 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S6C0-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGNCLTPHTSEDLLVPASATHLGGRRRRARSRERRPRDQVPGWAPAAPLVQEEQVRVPQRISQIQCLPKGVYKRDGSQEKMEQEECAICTLDFVCGDPIRSLPCKHFYHLGCIDEWLTRSFTCPYCRGPADGPQPSSRDTP", "length": 141 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7I2-1", "protein_name": "Beta-defensin", "gene_name": "DEFB125", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MNLLLTFMICGLLTLVTKAGWNVERCWSYNIGHCRRRCLHLERYKHLCMNKRACCIPLSSDDPYTQWPLPPEDQTVGMKTPYFRPVSPGSELDDQITITITVDQESTGTEQDIEGTAISFQASTPIPENIEDTKFSDKANTLNLHKL", "length": 147 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7N4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152708", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDQTNSSVVTEFVLVGLTQSLGMQFLLFLLFSTFYVGIILGNLFIVFTVISDSHLHSPMYILLANLSLIDLGLSSTTVPRMISDLFSDCKTISFHNCMIQMFFIHVTGGVEMVLLIAIAYDRYTAICKPLHYLTIMNPQMCMLLVVAAWITGVTHAVFQFAFVINLPFCGPNNVGSFYCDFPRVIKLACIDNYGLEFVVTANSGFLSTGTFFLLVVSYIFILVTVRQHSSKDLSKAFFTLSTHITVVFLFFLPCMFLYVWPFPTKSLDTFLAIVDFAVTPVLNPAIYTLRNRDMKVEMRRLSRQVISSREMT", "length": 312 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SBB9-1", "protein_name": "DNA-directed RNA polymerase RBP11-like dimerisation domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MHALPAFESFLLFKDEKITIHKDTKAPNACLFTIDKEDHTLGNVIKSQLLKDPQVLFAGCQVPHPWEHKIIVPVQTTPDYTPQEALLNVITDLISKLSLLEERLRVAIKDKQEGIECWTGRGPAWPGPALTLALLQAPCG", "length": 140 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SBV4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100154723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MESENITVVTEFIFVGLTQSRNIQLLVFVLVFIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNPRACYALSLAQWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLLTLICFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPGIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKKLLINN", "length": 305 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SJ79-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259717", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTKGTEFILLGFAGQHKSWPVLFIVFLVTYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLEEKVDLCYATAITPKMLQNFVWTEHSISFIGCMVQLLTYGAFATSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLVIGSYFMGFLNASVNTSFTFQLNFCKSNKINHFFCDAPPILALSCSSIYFSIMLLAAFVGFNLTCTVSVVIFSYVFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 310 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SLL7-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSISKFLLLGLPIQPEHQGMFFVLFLVMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFLACIDNLLLAVMAYDRYVAICHPLHYAIIMREELCLCLLVLSWLLSCAYALTHTLLLAQLSFCADIIPHFFCDLDALLKLSCSDTSLSELVTFTAGAAVVIFPFIGILVSYGHIGLSILRVPSTKGICKALSTCGSHLSVVSLFYRTSMAVYLSSSGQFHDKDIIVSVMYTVVTPMLNPFIYSLRNRDMTLALGILFRNINIFSK", "length": 311 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SMZ6-1", "protein_name": "10 kDa heat shock protein, mitochondrial", "gene_name": "HSPE1", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTRVVLDDKDYFLFRDGDILGKYVD", "length": 102 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SRB7-1", "protein_name": "Large ribosomal subunit protein eL31", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAVVQKSGEKKRGRSAINEVVTREHTTSIHKRIHGVGSKKRAPRALKEIRKFAMTEMGTPDVRNDTRLNKAVWAKGIRNVPRRICAPLSRKRNEDEDSPNKLYPLVTCVPVTTFKNLQTVNEDEN", "length": 125 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SUB9-1", "protein_name": "Multifunctional fusion protein", "gene_name": "IL1B", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MATVPEPAKEVMANNGDNNNDLLFEADGPKEMKCRTQNLDLSPLGDGSIQLQISHQLCNESSRPMVSVIVAKEKPMNPSSQVVCDDDPKSIFSSVFEEEPIVLEKHANGFLCDATPVQSVDCKLQDKDEKALVLAGPHELKALHLLTGDLKREVVFCMSFVQGDDSDDKIPVTLGIKGKNLYLSCVMKDDTPTLQLEDVDPKSYPKRDMEKRFVFYKTEIKNRVEFESALYPNWYISTSQAEQKPVFLGNSKGRQDITDFTMEVLSP", "length": 267 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F2Z5L2-1", "protein_name": "Histone H2A", "gene_name": "H2AC18", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHHKAKGK", "length": 130 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F4IWB9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 28", "gene_name": "CYP705A28", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIMGRSCSEKNGEAERVRGLVIESLALSPKIFLGMIFHKPLKKLGISLFQKDIKSVSPKFDELLEKFLVEHEEKMEEDHYKANDMMDLLLEAMEMRMQNVNLCIKRVSNTKARKPPILFRYGKYSNNSLLLQELLVAGTDTSALATQWTMAELINNPTILERLREEIESVVGNTRLIQETDLSNLPYLQSVVKEGLRLHPPASISVRMSQERCELGGFYIPEKTLLVVNTYAIMRDPNFWEDPEEFKPERFITSSRSEQEDEMREEVLKYIPFSAGRRGCPGSNLAYVSLGIAIGVMVQCFDWRIKGEKVNMSETAGTIMLAMAQPLKCTPVPRTLNLLPSSLHIPSS", "length": 348 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J311-1", "protein_name": "Zinc finger (C2H2 type) family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLDGVELLLDLREMVSQSGFEKSTTCSGVIALRSNLQSKSSHKCKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYECKVCGKIFGCYRGLGGHTKLHRSTKRELASTQDENSLLDSSEAKKIVSQPSSFKVSQEEKFLHCVELKQDFSEPLSHSGALPSTLRSKLQTKTQWKSSCHCKICGKSFVCSQGLGNHKRVHREISGKLACKRKYTEDYNPFSDSLKAKKIVKKPSSFEVSQEEKILHCVELKQDFGELLAHSGFDKSISCSKSIKVKKVARKNEKTEDSTSLFGVFVGEMSQRLHGCKTCGRKFGTLKGVYGHQRMHSGNHNRIEDENGLERIWGLKKKSRVCSVSAFDRFKGSSFMAEIEKHEVIEAALNLVMLCQGVYDFASISNLPLGDGFMDLELKPCPLRRKLQKKSRSSYKCSICEKSFVCSQALGSHQRLHRWKLVPKPEYIEDDSSLLDSSEAKKIVSKPSSFEHAQEEKILQCVEPKLEFHEQLAHSGFDKFDTCSKIRFSALPSPPEAKKIVSQPPSFEVSVDEKILYRAEPKLNFSEPLAHSCFDNSSSYRSIICGKSFVCSQALGGHQTLHRSIKGQLAGTEDGNSLSVTDSEASKIVAQPSSYKSQGI", "length": 650 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JLV4-1", "protein_name": "Protease inhibitor/seed storage/lipid transfer protein (LTP) family protein", "gene_name": "DHYPRP1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASTTIILFLSFSIIPLLTIVRADNHSVYCPPPPPCICICNPGPPPPQPDPQPPTPPTFQPAPPANDQPPPPPQSTSPPPVATTPPALPPKPLPPPLSPPQTTPPPPPAITPPPPPAITPPLSPPPPAITPPPPLATTPPALPPKPLPPPLSPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIIRNVSDLDAVTCFCKSVGAPRFSLSPNFGIFFKVCGRRIPQGFSCPGPSPTISPPPLPPQTLKPPPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIVRNVSDLDAVTCFCKSVGARRFSLSPNFGIFFKVCGRRIPQGFSCP", "length": 375 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K5R6-1", "protein_name": "Cell division cycle 20.6, cofactor of APC complex", "gene_name": "CDC20-6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MMKSIALALCLTHHSPMVLSIVDYGDSQEKTIDSLWKKPHGSDLTWSGFSRVGVTEAYFAVPVDHFLTNPPSLRLSQTIYCRRGSSYVETEKVEEEDRDDFLKQVWFLTDNLVFFFVDIEEYIVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHESRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKKAASKKYTEPFAHVNHIR", "length": 428 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F5H284-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4D", "gene_name": "PPIAL4D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEATEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "F6R3J9-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1G", "gene_name": "Speer1g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNKKNKEVEIDWALIEKYLVDLNLNGQTGADQQP", "length": 157 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6X687-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1A", "gene_name": "Speer1a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKQSSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMPVTQNQKNKEVEIDWALIEKYLVDLNLNGRTGADQQP", "length": 157 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6YNI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRCRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILVGLQDYQDNKADVILKYNLDEARSLKAYGELQEHAKINETDTFGPGDDDEIVFDDTGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7AMQ8-1", "protein_name": "Exocrine gland secreted peptide 8", "gene_name": "Esp8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKVSAMTSFPVMLFLIILLLPSICSEERTQADPTISADNKKNFKTVVDLTDCQCERNFIESLESTLPASNQDQTLFENMTNQHKLNLSKMLSVLSKCCTQKQQVDTVHFRRMPHRIQSTKQNNYKKQVLYPMQEFMNLTRDVLVSRYV", "length": 149 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7C9P2-1", "protein_name": "F-box and WD-40 domain protein 25", "gene_name": "Fbxw25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSLPMLKILSYLDAYNLLQAAQVNKNWNALASSDVLWRKLCQRRWHYCDMVTLQLQGKETWKQFFIYRIWQEHAKTRAKPEDFTYKEIPVECGFYGYACYISGHGLTRNGQGKSVICMVSSKNTISTWDIHKSVITWVSPVQPASINLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLVGDTLGNLYIFRIPDLHLISTVNVFPYGFDEIDCSPQKKWVLLSKNYPHILPKVFYMSSLLRTSEFSAPVSTILEFSLCQGAFWTPRREDRITLMSRSGFPQITKFETFDMKLEGIGNKVAVQGKLIASFFLPYYEESPNWIGVSDKDVIVCSTHFFLLLFTINGLHLQTFQYCPETIVRLCVDPVHVIVTCNNGSLDVYAWEERSLLLRKCYRLQNKRPLPLYGFINNLLCDDVSIVQLMRDGHGPYSLIAYALNICS", "length": 466 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7ELE5-1", "protein_name": "NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial", "gene_name": "Ndufs7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RRTVVYTARARSQEKSGSEPLSLWFRFPLVSIWALDQNRNSLEDGPQRLSEGRGQDGGAGGSWLALCTDPGSAHRHSGSAAQSPPECGSHWEPEQSAVSKAGAGAVVPKPSHLPRSRAEYVVTKLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQADVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIKREQKLKIWYRR", "length": 271 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7F947-1", "protein_name": "Beta-defensin-like domain-containing protein", "gene_name": "Spag11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLSQRPPNVFRHVVDFLKKNQTHITQACSGNSGGRKASSSDLCGCALCLEAPSPHSQLSYKRACSSCPPTRGSSVPAVPSTAMKQRLLPSFVNLLLAALLLPGKAETWLRSWTQALSAVVTLGSSSASSINHLVTEPPSSPQDEFPAQGGNGSGLLHHRVKRFPPRTPPYHEPGPNYQIVNCKKNEGFCQKYCNFMETQVGYCSKKKEACCLHPF", "length": 216 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7FNC4-1", "protein_name": "Interleukin 36, gamma", "gene_name": "Il36g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSKYPHSPCTASGKETPDLGQVSDVDQQVWIFRDQALVTVPRSHTVTPVTVTVLPCKYPESLEQGKGTPIYLGIQNPDKCLFCKEVNGHPTLLLKEEKILNLYHHPEPMKPFLFYHTLTGATSTFESVVFPGSFIASSKIGKPIFLTSKKGEHYNIHFSLDII", "length": 164 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F8VPX6-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A1", "gene_name": "Speer4a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVNGRETREGRKDANLPPESNEGRRRWTWRMWMAHRQTTSSVPVTSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHNLEMENMEARENKQEFKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQERLVELNLSCKDEQEKTSNLETQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHTQNPPSSSDESSSDESSYSTCPAWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F8VQM2-1", "protein_name": "C-C motif chemokine ligand 26", "gene_name": "Ccl26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFFDLGLLVLLAIFLSVQLGVATCGSSIAMSCCPNFSYYVIPWSWVYSYKFTDKSCTSDGVIFFTKTGKQFCVQPGAKWVQRFISLVNTRNHL", "length": 93 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3GSG1-1", "protein_name": "Ferritin", "gene_name": "LOC100767129", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGFLRKSHRRQRHRCPLRVSRATVAYPLVFMTPPIISPPSQVRQNYHFDCKTAVNNHVQLQLHNSSVYLAMAFYFDSEDVAQKNLASFFLNKSHECTAQAEMFLELQNQRGGRISLGSIREADRNNWLGGLQAMECALQLELSTNQSLVALHQLASSKSDAHLCSFLKNHFLTKQVEVLKEISGYVTKLRQMGSPDDGIAEYLFGKLTLDDNKGK", "length": 215 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3GWA3-1", "protein_name": "60S ribosomal protein L18a", "gene_name": "LOC100764432", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKASGTLREYKVVGRCLLTPKCHTPPLYLMRIFALNHVVAKSRFWSQLKKMKSSGEIVHCGEVRPEVPLQVKNFAIWLHYDSRNGTYNMCREYWDLTVTQCYRDMGAQHCARTHCIHIMKVEEIASGKCQRPAVKQFHDSKIKFLLPHRVLRCQHKPHFTTKRLNTFF", "length": 168 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H156-1", "protein_name": "Prefoldin subunit 4", "gene_name": "LOC100773780", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MVATMKKAAAEDVNVTFEDQQKINKFARDTSRITEQKEIEVKKNHLQNLEDTFNDIMLADGDCFMTQYLIRDVLISHSQEEAQEMLEEAKKTLQEEIDALESRVGAIQWVLANLKVQLYTKFGSNINLGVDES", "length": 133 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H2T6-1", "protein_name": "Histone H4", "gene_name": "LOC100757199", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H8X2-1", "protein_name": "1-acyl-sn-glycerol-3-phosphate acyltransferase gamma", "gene_name": "Agpat3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGLLAYLKTQFVVHLLIGFVFVVSGLVINFTQLCTLALWPISKQLYRRINCRLAYSLWSQLVMLLEWWSCTECTLFTDQATVDHFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKVLAKRELLCVPLIGWTWYFLEIVFCKRKWEEDRDIVKEGLQCLSDYPEYMWFLLYCEGTRFTETKHRISMEVAASKGLPPLKYHLLPRTKGFTTTVQCLRGTVAAIYDVTLNFRGSKNPSLLGILYGKKYEADMCVRRFPLEDIPADENDAAQWLHKLYQEKDALQEMYKQKGVFPGEPIKPARRPWTLLNFLCWATILLSPLISFVLGVFASGSPLLILTFLGFVGAASFGVRRLIGVTEIEKGSSYGNQELKKKE", "length": 376 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HAB3-1", "protein_name": "40S ribosomal protein S15", "gene_name": "LOC100759804", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAEVEQKKKRTFRKFTYCGVDLDQLLDMSCEQLMQLCSTRQRLLLNCSLWRKQHSLLKSLRKAKKKVPPMEKPEVGKTHLRDMIILPEMAGSMVDVYNGKTFNQVEIKPKMIGHYLGEFSITYKPVKHGGPGVGATHSSRFIPLK", "length": 145 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDI6-1", "protein_name": "Lipid transferase CIDEB", "gene_name": "Cideb", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEYLSALNPNGLLRSVSTMGSELGRRVWNSGPPPQRPFRVCDHKRTVRKGLTAATRQELLDKVLETLLLSGVLTLVLEEDGTAVESEDFFQMLEDDTCLMALERGQSWSPRSGMLSYGLGREKPKHSQDIARITFDVYKQNPRDLFGSLNVKATFYGLYSMSCDFQGVGPKKVLRELLRWTSSLLQGLGHMLLGISSTLRHVVEGAERWQWHKQNHLRS", "length": 219 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDS5-1", "protein_name": "Histone H3", "gene_name": "LOC100773314", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HGI3-1", "protein_name": "PHD finger protein 6", "gene_name": "Phf6", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLVSENQKVAAHHKCMLFSSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEETFNEHELEPSSPKTKKKSRKGRPRKTNFKGLTEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEETEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGRLAIDQQLTQQQLNGN", "length": 364 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HJW3-1", "protein_name": "Calcium homeostasis modulator protein 6-like", "gene_name": "LOC100774768", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEKFKAVLDLQSKHRSALGYGLVTLLTAGGEKIFSEVVFQCPCSATWNLPYGLVFLLVPALALFLLGYALRTRTWRLLTGCCSWSASAQSSSGLQRVFVCAQISAAAALPPLTWVAVALLGGSFYQCAVSGSEAMARHLCKGRDPSCAAKLPQVPCKKQEAEMQDILSQLKAQSQVLGWILIAAIIILLLVVKSVTRCLSPVSYLQLKFWEIYLEKERQILQGEAMEHATQLAKENVRCFFDCTNPKDCSTPSSKAWQQISALYTFNPKNHFYSMLHKYVNRKDMSGSLRSVEGDAVVPVLGFVDASGMATTHGV", "length": 315 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQ40-1", "protein_name": "Eukaryotic peptide chain release factor GTP-binding subunit ERF3B", "gene_name": "LOC100767578", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDLGSSSDSAPDCWDQVDMEVPGSAPSGDGFTSASTAAAEAAEAEAQRQHLSMAFSSQLNIHAKPFVPRVSAAEFVQSFLPGSAQPPAPTTSSSDETCTGAGDPQGKRLGWGAPVEPSKDGPLMSWEGSNSAVTMELSEPVVENGEVEMALEESWELKEVSEAKPGGSLGDSGPPEESGKEMMEEKEVIRKSKSMAIPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDRRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKYLIVLINKMDDPTVDWSSERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDSLPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGIVSDDAETDFVAPGENLKIRLKGIEEEEILPGFILCEPSNLCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD", "length": 631 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQN5-1", "protein_name": "Transcription factor 19 isoform X1", "gene_name": "Tcf19", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLPCFQLLRIGGGRGGDLYTFHPPSRSGCTYRLGCRADLCDVALRPQQEPGLISGVHALLHAELQGDDWRVSLEDHSSQGTLVNNVRLPRGHRLELSDGDLLTFGPEGQAGTSSSEFYFMFQQVRVKPQDFAAITVPRSRGEAGTGFQPMVPSQGAPQRPLSTLSSAPKATLILNSIGSLSKLQPQPLTFSRGGGRPQSLAVPTQPGEVGASPPAPPTRNRRKSVHRVLAELDDENETSLSPLSVLMEPRKKLRLEKAALVSSGRD", "length": 266 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HWQ5-1", "protein_name": "Zinc finger protein 219", "gene_name": "Znf219", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEGSRPRILVGHLEPSPPAFDGELDLQHYSNGPGVSTGSPGMGAVGWSETRAGERRFPCPVCGKRFRFNSILALHLRAHPGAQAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLLLELEERALLREAQLGRARSSGGMQATPATEGLARPQVPSSSAFPCPFCKGKFRTSAERERHLHILHRPWKCSLCSFGSSQEEELLHHSLTAHGASERPLAATSTPEPQPPPQPEPRSALEPEPEPEPRPEPEHEANPAPTPAPPEEPPAPPEFRCQVCGQSFTQSWFLKGHMRKHKASFDHACPVCGRCFKEPWFLKNHMKVHTSKLGPLRAPGPGSTPARAPQPPDMSLLAYEPLGPALLLAPAPTPAERREPPSLLGYLSVRAGEVRPNGEGADPGAGRSYGGGFRPLPSALPNRARRHRTEEPEEEEEVVEAEEESWARGRSLGTLTSLHPHPGEGSGQSAPAVGAQARPTGTQEENGLLVGGARSEAGRGATGKDCPFCGKSFRSAHHLKVHLRVHTGERPYKCPHCDYAGTQSGSLKYHLQRHHREQRSSAGPGPPPEPPPPSPRGAASLQPQSGAKPTQASATWVEGTASTRPSSSGTGAGSRRKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGSGGALHRCLFCPFATGAPELMALHLQVHHSRRARGRRQPRADTSPPYVRAPSGETPPSPPLEEEGSPGLSRSGEAGLGGQER", "length": 725 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I071-1", "protein_name": "Large ribosomal subunit protein uL29", "gene_name": "LOC100753244", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAKIKARDLRGKKEELLKQLDDLKVELSQLRVAKVTGSAASKLSKIRVVQKSIVRVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMHRQLTKHEEKLKTKKQQRKERLYPLRKYAFKA", "length": 122 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I1Z3-1", "protein_name": "DNA damage-inducible transcript 4 protein", "gene_name": "Ddit4", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MPSLWDRFSSSSSSSSSSSSGTPATDRPPRSAWGSAAREEGLDRCASLESSDCESLDSSNSGFGPEEDSSYLDGVSLPDFELLSDPEDEHLCANLMQLLQESLSQARLGSRRPARLLMPSQLVSQVGKELLRLAYSEPCGLRGALLDVCVEQGKSCHSVAQLALDPSLVPTFQLTLVLRLDSRLWPKIQGLLSSANSSLVPGYSQSLTLSTGFRVIKKKLYSSEQLLIEEC", "length": 231 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IAH8-1", "protein_name": "Guanine nucleotide-binding protein subunit gamma", "gene_name": "LOC100755128", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASNNTASIAQARKLVEQLKMEANIDRIKLSKAAADLMACCAAHAKEDPLLTPVPASENPFREKSFCTIL", "length": 70 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IG76-1", "protein_name": "Olfactory receptor 7E24 isoform X2", "gene_name": "LOC100765597", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYILALFGNLLIILTVSSDSHLHTPMYFFLSNLSMIDIGYISTTVPRVIVDIQTHCPVISYVGCLTQMSLIIIFACMDDMLLSVMAYDRFVAICHPLYYQVIMNPSSCGVLLLGSFLLSLVNLLLHYVAVLSFSNCEDIFEISNFFCGPSELFKLACFDTFTTNIVRYCAGALFGLLPISGIIFSYFKIVSSIMRSSSSSNGKWKTFSTCGSHLSIVCLFYGTALGMYFSSSLSLSPKTNAVASVMYTVVTPMLNPFIYSLRNKDIKTALRKILSRTF", "length": 278 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IGD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100770882", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGANSSSLTPEFFVLNGIPGLEDAHVWISLPFCFMYMIAVVGNCGLMYLIGHEEALHRPMYYFLTLLSFTDITLCTTTVPNTLCIFWFNLKKIGFKACLAQMFFVHTFTATESGMLMLMALDRYVAICYPLRYGTILTNPVIAKASLATFLRSVAFILPFTFLTKRLPYCRGNTIPHAYCDHMSVAKISCGNVKVNAIYGLLVALVVCAFDIFCITVSYTMILRAVMNLSSADARHKAFSTCTSHICAIVITYVPAFFNFFTHRFGGHTIPHHIHIIVANLYLLLPATMNPIVYGVKTKQIRESVIKFFSGDKSGITEIKGLQNK", "length": 326 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3INQ1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100763177", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MFCNTSTPGHSTFLLTGFPGLEASHHWVSIPINLICVVSILGNSIILFLIRTDPALHEPMYIFLSMLAASDLGLCASTFPTMVRLFWLGIRELPFDLCAAQMFFIHAFTYVESGVLLAMAFDRFIAIRDPLHYATILPHSAVAKVGAAVLIRAILLNLPGPILLRRLLFPQVSVLSHCYCLHCDLVGLACSDTRINSLVGLVSILLSLGLDSSLIMLSYVLILRTVLSIASPGERLKALNTCVSHLCIVLIFYLPKLGLSVLHRVEKHSYPALAVLMANLHFLVPPFMNPVVYCIKSKQIRQGFLKRFQQKRVDVS", "length": 316 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3MYE2-1", "protein_name": "Large ribosomal subunit protein uL18", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGFVKVVKNKAYFKRYQVKFRRRQEGKTDYYARKRLVIQDKNKYNTPKYRMIICVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAVAYCTGLLLACRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGALTCYLDAGLARTTTGNKFFGALKGAVDGGLSIPHSTKQFPGYDSESKEFSAEVHRKHIMGQNVADYMRYLTEDEDAYKKQFSQYIKNNVTPDMEEMYKKAHAAIRENPVYEKKPKKEVKKKRWNRPKMSLGQENDRVAQKKASFLRAQERAAES", "length": 295 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3MZM9-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC107131211", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELRRRLLIIVIGTLITGYMVTCTCLLHYRCDSKEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3UW31-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r176", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVTLQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQFVTLAPGTWGRVMLPGRAPNFLRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDSNSKSKWVCSTSGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFVDSRVWLRRVKEILSVSFPTFSPLLLIFRDPKDPCSLLFGC", "length": 304 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3UY92-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r158", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQLLLLCQFGVGTVAKVFLFVRNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVARSTNLCSTCVLSFHQFVTLVPLNRGKGKLVLRASVTNMASYSSYSCWFFSVLSNIHIPIKVSGPQIKDNNTDSNRKLFCSTSGFSVGTVLLQFAYDATFMSIMVWASVSMVLLLHRHRQRMQHILTPNQDARGQAESRATRTILMLVVTFVSFYLLNFICIMLHALFMHSHFFVRLVSEILTAVFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3V9M0-1", "protein_name": "Cystatin S like 1", "gene_name": "Cyssl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MACLLYTQLFLLNTFILFLNLSLNPVLGQILAGIEKSIIEEEGALEALNFAVSEYNENNSDLYLSRVVEVKTVKTVQQQIEAGKTLLFDVILGKTACLKTQDDLSDCPLNEPTDLQEREFCSFEVHLPDWANAINLLSSICNRI", "length": 144 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3X693-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "RVFLPLLLLGVILPGGDNEDGPTSFHLIQISTFVNNTWAQNQGSGWLDDLQIHGWESDSGTAIFLKPWSKGNFSDDEVTELVDLFRAYFIGFTREVQDRVNEFQLEYPFVIQVTAGCELHSGEAIESSLRGALGGLDFVSIQNHSCVPAPDGSSRGQKFCALTTQYQGISDIIERLLSETCPRYLLGVLDAGKAELQRQVKPEAWLSSGPTPGPGRLLLVCHVSGFYPKPVRVMWMRGEQEQPGTQQGDLMPIGEAAGLNCRVKHSSLGDQDIILYWGHPTSIGLILVAIIVPSLILLICLAFGVLRFMGSHRIGHD", "length": 317 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3X9Q9-1", "protein_name": "Predicted gene 6526", "gene_name": "Gm6526", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGDQGETRPRQKESAIPSCKKRRMKSFWGRHMSAGKKSSQNCNITNHMKNMNKLEDMKFYIRKINAKRLELFPILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKMTQSISDTIETYKEFIEDKDSYSFTHSYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEEKRFCDESSKNIHPKC", "length": 198 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G5E8X8-1", "protein_name": "Oocyte maturation, alpha", "gene_name": "Omt2a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTLVFTKVHLESWVYKGLRGQHDSILELLKENLHHYLCIEFDEGLNDTVVYIIGFKFFAMFAMFVIVSLACNLRTKRNRARAWARGLQSPVWWNRRYFI", "length": 100 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ46-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLSFMSSLLENILYFQAGLGVLANIFLLVFYIFIILGHRPKPMDLISCQLTFVHIMMFLAGENFWLANIFESLNVENDFKCKATFYTKRVMRGLSICITCLLSVFQAVMISHRNSLLAKFKHKLKIYMINALFYIWTFNLSLSSNLIFYVGGFTNMSQTKQLKVTKSCSLIPMNYIIRGLILTVISSRDMFLVGVMLTTSTYMVIILCRHQRQCKHLHSTSHLRASPEKRATQTILLLVVFFVIMYWVDFIISSTSILLWMYDPVIMIVQKFVVNAYPAITPFVQISSDTRVIRVVKNWHS", "length": 303 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ88-1", "protein_name": "Vomeronasal 2, receptor 3", "gene_name": "Vmn2r3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMAIRKKCLILELTVFLCVELYAQYEDQNMTCRLMRKFNLTGYVEAENHHFVIGGQFPVHYRTIPTSDSDEEPESPMCEGFNFRGFRWMKTMIHTIKEINERKDILPEHTLGYQIFDNCFSTTKAMESSMVFLTGQDEYKPKWRNSTGKYLIGIIGAGGSTMSLAGARILLLNDVVQVGYASSSSILTEYLNVYRTIPSDKFQTEAIVNLIRHFGWVWIGAIASDDDYGKHGVKSFRKILETNNLCIAFSETIPKVYSNEKMQIAIDAVKSSTAKVIVLYATDFDLSPFVLEVIHHNIAHRTWIATEAWITSALIAKPEYFPYFGGTIGFAIPRSVIPGLKEFLYDVHPSKDPNDVLTIEFWQTAFNCTWPNSSVPYNVDHRVNMTGKEDRLYDMSDHLCTGKEKLKDLKNTYLDTSQLRITNNVRQAVYLMAYGLDRLIRVLIKEYREYLLHPKILAFMSYKLFEYIRKVKFTTHDGRKIELNVHGDIENGYYDILNWQMDNTGDIAIVKVGEYKFTRSKYELVLPKNSTLFWNTESSRLPDSVCTKVCPPGTRKGFITGQPVCCFDCIPCEDGYVSEKPGQRLCNPCSEDDWSNAEKNKCVPKHVEFLAYEEALGFTLVILSIFGALVVLAVTVVYVIHRHTPLVKANDRELSFLIQISLVITVLSTMLFIGKPCNWSCMARQVTLALGFCLCLSSILGKTISLFFAYRISISKTQLISMHPSFRKLIVLLCVFGEIGVCASYLVLKPPSMFKNIERQNVKIIFECNEGSVEFLCSIFGFDVLLALLCFVTTFMARQLPDNYYEGKCITFGMLFFFIVWISFVPAYLSTKGKFKVAVEIFAILASSYGLLGCLFLPKCFIILLRPKRNTDETVGGRVPTVDRSIQLTSASVSSELNSTMVSTVLDE", "length": 909 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BKT1-1", "protein_name": "piRNA-mediated silencing protein C19orf84 homolog", "gene_name": "Gm52993", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDELEDGALSNGDNLSLPSAGTESWPTSATPGLPPSLLSTLDPTHLGLPEQLASVTVPIRLDTLSYLLHSALLGTYNLQQSLPPCSCTAQPSHIWPDTVRRPPRRSGQARGGWEVRRRPSRGWGRGRGRGRVWAQSQRGPERAEERERNMAGEPGAGPSTPPVTPPSQDGQKEAGGLSEDWEADY", "length": 185 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BLP0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLTNILYFQAGLGILANTFLLCFYTFTILCHRSKPMDLTSCQLTLAHILFLLAGGDNWLAVILESLNIENDFKCKAIFYTNRVMRGFSICITCLLSVFQAVTISPHTSLLAKFKHKLKTYIIYAVFYIWFYNFLVCSHLLVYVGGFNNVSETNQMRVTESCSLFLMNYIISGLIFTVTTFRDVFLVGVMLITNAYIVIILFRHQRHCKHLHSIRHLRVSPEKRATQTILLLMVFFVVMYWVEIIISSTSLLLWMYDPGFLTVQKLIVTVYPTITPLVQISSDKRVINVLKNLQSKCQQIF", "length": 302 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "I3ITL1-1", "protein_name": "Gap junction protein", "gene_name": "gjc4a.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSWDFLTHLLDEISNHSTFVGKIWLTLLIVFRIVLTVVGGETIYDDEQSEFVCNTLQPGCKNVCYDAFAPLSHVRFWVFQIIMISTPSVMYLGFAMHKIARMADNEYQPRKHKMLSTVHQRMNRDYDMVDEMTEEVPMIPEEIEPSEKDNKSAASTKTTAASDAAVKHDGRRRIKRDGLMKVYVLQLISRVAFEIAFLFGQCILYGFEVSPSYICTRSPCPHTVDCFVSRPTEKTIFLLIMYVVSVLCLALTVLEILHLGIGGLRDSFRSRANRRLPVHRPSTSTICHRLSSAPPGYQAVQKKYSSGKLKAEFLSDSGRESLADDNTTRDLDRLRRHLKIAQQHLDQAYHTEEVGASHNSGPDSKSIAAEQNRLNQAQGGFGSTEEKVFKEAHA", "length": 394 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "I3L8A5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "FPSRQERTMRRENQSSISEFLLLGLPIPPEQQGVFFALFLGMYLTTMLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFSSVTVPKMLMNMQTQDQSIPYAGCVTQMYFFMFFACLDNFLLTSMAYDRYVAICHPLRYTSIMRGGLCTLLVTVSWILSCANALCHTLLLAQLSICAENTIPNFFCDLGALLKLSCSDTSFNDLAIFIAGVATIMLPLLCILVSYGHIGATILKIPSTKGICKALSTCGSHLSVVFLYYGTIIGLYLVPSSSTSSHKDIVASVMYTVVTPLLNPFIYTLRNRDMKGALEKLFHKAPVLS", "length": 320 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3L8Z8-1", "protein_name": "LRRC37A/B like protein 1 C-terminal domain-containing protein", "gene_name": "LOC100514982", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MMTLELEKLILPSHMACCLCQFKSNIEVVCKTVKLHCDRCLKNSTRCDKETSLGDVEGSFMKVLQARKKNTSTELMIEPERPSSDKSGVSLSSFMNEQLDFSDESDVISALNYILPYFSEGNLEDVESTLLPFIQLLFSNVAEADIPPGHLKTHTGNPPVNPESGTSGYTNKLRQLRFLENLLDAEIQEKIDEVMKKEKTAMLIYSNILSPKLRRQILRKKLETARTQAESLEEIESVDKRPLKVNRVLKGPRGIKKRHFRAMRRQSIRRKETAQPFVETTTKGSKLGGPSARELEQLWVVQRPRKRVADSLQKEPSFGREHKAEVSSFLKQYSRGRPAASIHPKAPATVKKTSEDLSDTLFVLVDANARVKNRKASETISYPRKIDSFHPSHSPVLHRTPEPQNRQAFRDKGSSYRLLLALRPLSSAVRSLINSPSQEASSPSGELTLQEQPSPESFSPSEPSTEHIISEKDTPQVVFEELPTSGTTTLSGPIPGPTAQGTLPTEYSATTADNVMPTGQHTSAIQWEHHNVGTDVASTPTSFISPGVSSPGSQFEAQLNQQLQSLIPNNDVRRLISHVIRTLKMDCSEPQVQLACAKLISRTGLLMKLLSEQQEAKASKAEWDTDQWKTENYINENTEAQGEQKESSELTKDVPGYGYNNKLILAISVAVVLMLLIVILCLIEVYSRRRTLREGKVGRRRGFFGFLLRKRRSGESESEGFFWRRRPLWLRDTYRPLSATRKKNMAEKLHDKESSDEEEIFHKGAGEVSEAPADVILTIESDVEDLGEETDTAPEGPPE", "length": 799 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LBH4-1", "protein_name": "Large ribosomal subunit protein uL11", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPPKFNPNEIKAMYLRCTSGEISAKSALAPKIGPLGLSPKEVGDDIAKAAGDWKGLRITVKPTIQNRQAQMEVVPSASALIIKAPKELPRDRKKQKNIKHSGNITFDEIVNIARQMRRCSLARELSGTIKEILGTAQSVGCNVNGRRPHDIIDDISSGAVECQAS", "length": 165 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LC12-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFGANLTIFHPTVFILLGMPGLEIYHTWLSIPFCLMSIVAVLGIGALILVVLSESTLHEPMHVFLSMLAGTDNLLSTTTVPKALAIFWFHAGEIAFDACITQMFFIHVAFVAELGILLAMAFDRYVAICALLRYTAVLTPSTIVKLTLAIWGWGIGTIFPIIFLLKRLPYCRTNIIPHSYCEHIGVARLACADITVNIWYGFSVPMASVLVDVAFIAVSYTLILQAVFRLPSQDAQHKALNTCGSHIGVILLFFIPSFFTFLTHRFGKNIPHHIHILLANLYVLIPPMLNPIIYGAKTKQIRDSLAHMLSRVGMS", "length": 315 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LEQ2-1", "protein_name": "All-trans retinoic acid induced differentiation factor", "gene_name": "ATRAID", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARPGFRSPSSLVPRAAALLLVLSVPRALALPEICIQCPGDVQNLSEVALYCKQTPELMLQGRCCLNGKGTILGLDLQNCSLKDPGPDFAQAHTAVIIDLQANPFEGDWANTFRGFTQLQTLILPQGVNCPGGINAWDVVTFYITNQTCQGQRTFATALGTQKRVLRMDLVLLMVLVSCSVFVLMASMATSVCARAHSHCSCSSVFWDPQHYPFPSCFGGLNAEKPRLHEPQRSSY", "length": 236 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "J3QM75-1", "protein_name": "Secretoglobin, family 2B, member 19", "gene_name": "Scgb2b19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLITGELSFQTTEACVPFFEGYASVVSGSRVWLYHELQSFDATAEEKVALEKIQGCYREERLRNILLEPKIMEAMVASPECRSYYSLNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMG8-1", "protein_name": "T cell receptor alpha variable 13N-3", "gene_name": "Trav13n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKRLLCSLLGLLCTQVCWVKGQQVQQSPPASLVLQEGENAELQCTYSTTLNSMQWFYQRPGGRLVSLLYSPSWAEQRGGRLTSSAASNESRSSLHISSSQITDSGTYLCAME", "length": 112 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QML3-1", "protein_name": "BTB domain containing 35, family member 29", "gene_name": "Btbd35f29", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHQGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKKVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDALTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMQ9-1", "protein_name": "Predicted gene, 20873", "gene_name": "Gm20873", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRESSSNTLRNIVGRRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPGLYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANLSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMS5-1", "protein_name": "BTB domain containing 35, family member 2", "gene_name": "Btbd35f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEDIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKKVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW5-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADIILKYSPDEARSLKAYGELPEHAKINEMDTFGAGDDDEIMFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW9-1", "protein_name": "BTB domain containing 35, family member 6", "gene_name": "Btbd35f6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLQTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QN64-1", "protein_name": "BTB domain containing 35, family member 22", "gene_name": "Btbd35f22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QNQ5-1", "protein_name": "BTB domain containing 35, family member 24", "gene_name": "Btbd35f24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKDTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIYDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP08-1", "protein_name": "Histone H2A", "gene_name": "H2al1k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTRSQRGELPLSLVDRFLREEFHSSRLSSSALSFLTSVLEYLTSNILELAGEVAHTTGRKRIAPEDVRLVVQNNEQLRQLFKPGGTSVNEDDN", "length": 105 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP87-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCNIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINETDTFGAGDDDEIVFDDIGDEDEDIDDI", "length": 144 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP96-1", "protein_name": "PRAME like 3C", "gene_name": "Pramel3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMDTKDPPTLLDLATQSLLSNEHAAIQALEEIPRELFVPLFTAAFTGRHKNILTAIVKAWPFACLHIGALSVQEPERELLKALIESLQFLPALNSATRSPKLRILDLRQDAGCKTVCPDISTNSTICFRSCAHSEHSIFKIEGQESLSSSKSEAQPSRLPMELIVDISLDGTLRERNFFALLQNKVEQSLGSLHLCCRDLQINNLCECRHALSHLDLKCVDHLAVDESPLTEVTKLLSHTIQLDSLSLSKIACRSLNGRTFRNFITQLSRMNHLKELSLSSFCLTDHLETVLRVLSADLEFLYLPFCGLSYSDFKFLSECSQVSHLKLLNVNNNPIYWEDCEPFYYLLQNVSSTLQHLKICYCFLTDSTISVLIPALTRCSQLRVLHFYSNQITMGMLMRILELLTPLKELKHVIYPIPVHCYGRWHFQGSLDRQKVEDVQRQLNLMLQEAERSDMNWITYSD", "length": 463 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QPI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLTKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGAGDDDQIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QQ02-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLESMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7GP63-1", "protein_name": "Large ribosomal subunit protein eL39", "gene_name": "RPL39", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL", "length": 51 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "K7N5V5-1", "protein_name": "Predicted gene 5862", "gene_name": "Gm5862", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N660-1", "protein_name": "Predicted gene 10220", "gene_name": "Gm10220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARKLGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPSWE", "length": 267 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r168", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNGAMKTTEEVALQIVLLCQFGIGTMANILLFVHNFSPLLTGCQLRPKEVICANMAVSSILILFMTVFPNNVFVAQRNLLNDLQCKLEYFVYMVARSTNLCSTCVLSTYQFVTLVPGNFSELMVRGRSPKVISYSCCSCWLFGILYNVYIPMKVSGPQNRHNKTSTKSKWVCFTSGFSVGIVFLSFAHDAIFISIMVWASVSMVRLLYRHYQRLQYIFPPHQGNRGYAEIRAAHSIVLLVVTFVSFYLLHCICFILHIVFVDSNLWLRHIGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYKKPVI", "length": 309 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Gm10670", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANDFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSMHQFVTLVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATNTILMLVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNLKHRRQLH", "length": 321 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6G6-1", "protein_name": "Predicted gene 16440", "gene_name": "Gm16440", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLCQKENGDEGEIRTTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKITKQRSKINELEELKLDMRKISNDMEEMGGILELYIYEDLNYRMNTEFNIIKSQHEKTMLDMNEMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLSEKVRILLNENRKLLVEQAGTQLSHEEEKRFCEEASKNICASSAKEQQCVNSSRNRNMAQTTT", "length": 218 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6J5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r127", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLTAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6P1-1", "protein_name": "Reproductive homeobox 2H", "gene_name": "Rhox2h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKRSINYLLDVGPEEDEENANGVKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGPAAPVAGLMDNSNQEDLSATGCAQEKETQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPKFRHLWRHNFNVLQLQELESIFQCNHYISTTEENRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6T9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r175", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGFGTAVNIFLIVHNLSPILNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCFLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVNGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFLDSRVWLRRVKQILDVSFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6U2-1", "protein_name": "Predicted gene 3542", "gene_name": "Gm3542", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSNITNQISNINKVEELKLHIRKTSNERKEMCGILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRKLLVEQAGTQVSCEEERGSLRRPARTSVPQVQRNSSFPKCETVQQKLEHGTDHDMISLKEKCWWKRTGCAQEIHHCCLSSLITMAVMGCMLLLYFGFLGMNRP", "length": 270 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W5-1", "protein_name": "Predicted gene 17019", "gene_name": "Gm17019", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRDTREGRKDADLPSERNEGRRRWTWRMWMALRQTSSPVPVISKKQFEKEEKKLIKEIQLTTEETNELRDRLIYVTEGSMNKRPYHRQNPLYEKLKLKEKEIMTFLHNLEMENMEAQENKQELKKETHFYRNLHSRLLMEENLIKKKSMTLQQESKEVQADWAIIHQRLVELNLSVKDEQENSNLETPEYQVSEAARELGLATAEEDSILQNELPGQEAPAEHHLQHPQSSSDESSSI", "length": 255 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r170", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGVGTAVNIFLIVHNLSPNLNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHHRLQHIQSTNQKLRVHAESRASHTILMLVVTFVTCYHLDCICTFCNISFLDSQLWLRRVKQILDASFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r94", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVIFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r103", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Y3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSIILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFYIHSRLFIRLVSEVLAAVFPSICLHNGVLLSY", "length": 295 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Z0-1", "protein_name": "Predicted gene 17026", "gene_name": "Gm17026", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "XRSSWVPKQACCPCSSGYFRERIEYTQTPDQGRRRPAAHHGGKGQETTGHGEGSAGAASPQAPTINDQEKRHERLEKLKRELQNIKNARDELQGILANYTNKDLNDRINFETFMLQMQHDQVMTDLKRMPQDISEALYKCKQLTKENQFYCFRNCHLLIESNLIQHKVRMLRKENRQLLREQIALEECNIETKILCKEGSQKIKDHYTKQQQI", "length": 213 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N701-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r159", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMSVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNTRGQAESKATRTILMLVFTFVSFYLLNFICIIFHTLLMHSHFFIRLVSEVLAAVFPSISPFLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N708-1", "protein_name": "Predicted gene 10128", "gene_name": "Gm10340", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSVI", "length": 205 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N731-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r57", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALNILLLCHVVVGTVGNILLFVHNFSPNLTDSRLRPIQVILINLAVANAFMLLFSTYSYDLIDFVPRKPPTDLKCKLAYFFHMVARGTIMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVSYSCFSCWLFSVLNNAYIPMNVSGPQKSHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFLGIMAWTSVSMVIHLNRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCIIILFHITFVESRLSLRHVTKLLSLSFPTISPLLLIFREPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N744-1", "protein_name": "Predicted gene 8104", "gene_name": "Gm8104", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNMNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIDFTIIKSQHEKTMLDMEKMTQSISDTIEKYKEFIEDKDSYSFTHTYLLKECNQLKEKVRMLLNENRKLLVEQADQETSYGEEKRFCDETSKNIHPKC", "length": 198 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N751-1", "protein_name": "Predicted gene 3696", "gene_name": "Gm3696", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPQEHLCPKCQGTAV", "length": 203 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N757-1", "protein_name": "Predicted gene 3667", "gene_name": "Gm3667", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRRLLVEQAGHKCPVGKKRGSLRKPARTSVSQVPRNSSVK", "length": 205 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7F4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r260", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGNSLKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVVRSTNLCSTCVLSVHQFVTLVPLNRGKGKLVLRASVTNMASYSSCSCWFFSVLSNIHIPIKFSGPQITDNNTDSKRKLFCSTSGFSVGIVFLQFAYDATFMSIMVWTSVSMVLLLRRHRQRMQHILTPNQNPRGQAESKATHTILMLVFTFVSFYLLNCICIIVHALFMHSHFFVRLVSEILTAIFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r163", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVMTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLKFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPNICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r242", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7H2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r256", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILGHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSLLVARSTNLCSTCVLSIHQFFTLFPVSRGKGKLILRASVQNLASYSFYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDDTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATHTILMLVFTFVSFYLLNCICIIFHAFSIHSCLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9JA28-1", "protein_name": "Interferon lambda receptor 1", "gene_name": "IFNLR1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWRIRVLATLCFLWQPRVHGQLPPPQNVTLLSKDFDMILTWTPGEGSPPDVLYTVRYESKTRMDKWIKVPHCRNIHSVSCNLTCVIPNFFIKFRAQVKATSGRFHSPWVKSQFKEYHLDVELAPPLLNVNVKENVIHVNATFPMAICVESLPWMYDFNLWEAGSEDKKQYKSIFRKKAVTIDTTALRGNYCFNARSSIQSIDFKHSKFSQPVCMQLNYEGEWKFPFSATIPVFVLLILLTSASIIWLLKQDAKHKKMPQTLDLSNCKIAGPTFCCELRENEFLTDCLICTDKPMSQGKKNKTLAQNNQMWMASFLPSSSSEEEEEEEEEDSSSFIPYTEMLQFPRKHFNFQTPRTADAETILDSTSGVLSVVGGSTLDLSALGFSFFPIRKNEMDTSGSQGNEKASHSHSSSLGRISLTDVRFPGPREHGQHGTDSNDCLEVSLLHTLMNSSCTRLPADEHCLYKKDHDFTICYQKPTLDQPVQVSENPLLNEDPSMEKFIYLQTLQVAEDEGFASDCDSGNFTEGTPPASTVLSDELRISDMEKRYDKKFKFKGYQHSHYMRRS", "length": 567 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "L7MU37-1", "protein_name": "Reproductive homeobox 3H", "gene_name": "Rhox3h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDSTQGTKVLPAEESRNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU51-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a76", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQSNNVTEFVLLGFTQDPAGQKALSVMFSLIYIVTMVGNLLIVGTVIASPSLGSPMYFFLASLSLMDAIYSTAITPKLIVDLLCEKKTISFRACISQLFIDHLFGGVDIVILLAMAYDRYVAICKPLHYLIIMNRRVCILFLVMAWAGGLAHALFQVLAVYNFPFCGPNIIDHFGCDIYPLLLLACTDTYFLGLSIIGNNGAMCIVIFTLLLLSYGIILRFLKNHSQEGRRKALSTCGSHITVVFLFFVPCIFMYVRPVSSFPIDKFITVIYTIVTPMLNPLIYTLRNSEMKNSMEKLLQKTLSPSRIRLSSCCLCY", "length": 318 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU81-1", "protein_name": "BTB domain containing 35, family member 17", "gene_name": "Btbd35f17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANTWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU83-1", "protein_name": "BTB domain containing 35, family member 18", "gene_name": "Btbd35f18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDQVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MUB9-1", "protein_name": "Reproductive homeobox 2G", "gene_name": "Rhox2g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGLAAPVADLMDNNNQEDLGATGCAQEKEKQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPEFLHGWQQSFNVLQLQELESIFQCNHYISTTEAKCLARSMGVSKATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X6-1", "protein_name": "F-box/WD repeat-containing protein 15", "gene_name": "Fbxw15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAIHLPCLPMMKILSYLDAYSLLQAAQVNKDWNELASSDVLWRKLCQKRWLYCDMDTLQLQGKETWKQFFIDRIWQERAKFRAKAKDFTYKEIPLMCGLFGYACYISGCGLTRKGQDKSVVCMVNSKNTISTWDVHKSVITWKSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNNLKSPCKSLKAVFTKDGPIVLIGDTLGNIHIFRIPDLYLISTVNVLPYGFDGIYCSPQKKWVLLSKKHPHILPKVFYMSSFLRTSEFSAPVSTVLKLSLYERVFWTPRREDRITLMSRSGFPQVKMFETYDIKLEEFGNKRIVKGKLIASFELQCHKVNPQRFGVSDKNVIVCSTESSLLLFDINGLRLKTFQYCPEMIVKLSVDPLHVIVICNTGSMDVYAWEERSLLLRKCYRLHIERPLPLYGFIYKAACDDVSIIQLITDELSLSSLTSYALNICS", "length": 466 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X9-1", "protein_name": "Demilune cell and parotid protein 1", "gene_name": "Dcpp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSAPEGKNITSIRVFLKGRLIVGIQLNYDDNKDGQVYGSTAGKEMVARLSKEEHIIAAQGTYTPSALTQIIFTTNQPRQLMVGYYVGNSEYSSFPNDPSHVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 171 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y3-1", "protein_name": "PRAME like 51", "gene_name": "Pramel51", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIHSKERKYRLGLLEPGVTAFPCPNMVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSPGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFTLGDSEKLDEETIFSLISQLPTLHCLQKLYINDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPFCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELVSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPIECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVEL", "length": 520 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y5-1", "protein_name": "Olfactory receptor", "gene_name": "Or11g25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLSSPSNSSTITGFILLGFAYPREGQILLFVIFFIVYILILMGNASIICAVYCDQRLHTPMYLLLANFSFMEIGYVTSTVPNMLANFLSDTKVISFSGCFLQFYFFFSFGSTECFFLAVMAFDRYLAICRPLHYSSLMTGRLRNTLVTSCWVLGFLWFPVPIIIISQMSFCGSRIIDHFLCDPGPLLALACSRVPLIEVFWSIIMSMLLVIPFLFIMGTYILVLRAVFRLPSREGQKKAFSTCGSHLTVVSLFYCSVMIMYLSPTSEHEAGMQKLVTLFYSVGTPLLNPMIYSLRNKDMKNALQKILRT", "length": 311 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N227-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r125", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSMKTTEEVALQIILLCQFGIGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFARKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N255-1", "protein_name": "Predicted gene 3099", "gene_name": "Gm3099", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCLKGNGDEGETRPKKKEEGILSHEKGRRKLFWRRHRSARNTSTQNSNITNQISNINEVEELKLHIRKISNERKEMCEILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMTQFIIGSMQYSMELIEDNYSYSIKEDHLLRECTQLNKKVRILLNENRKLLVEQAGTQVSCGEEKRFCEEASKNICASSAKEQQLP", "length": 205 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N259-1", "protein_name": "Demilune cell and parotid protein 3", "gene_name": "Dcpp3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSTPEEKNITSIRVFLQARSIVGIQFNYDDKDGQVYGSTAGKEMVARLSKEEHITGVEGSYSPSALTQIVFTTTQPRQLMVGYHVGIYQYSSYPDDPSFVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 170 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N270-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVIFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N273-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r118", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSVHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N275-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r169", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVALQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLHGRAPKFVRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKSKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSPNQKLRFHAETRAAHTILMLVVTFVTCYLLDCICTSLHISFVDSRVWLRRVKEILAVSFPTFSPLLLIFRDPKDPCSLPFSC", "length": 304 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N288-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r151", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQILLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2A6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r116", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVFLSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2B4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLGAVFPNICPLLLIFRDPKDPFSVLFKC", "length": 307 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2C2-1", "protein_name": "Predicted gene 2974", "gene_name": "Gm2974", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKERRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N474-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1E", "gene_name": "Speer1e", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "ARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNQKNKEVEIDWALIEKYLVDVNLNGRTGADQQP", "length": 154 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0QWR4-1", "protein_name": "Aly/REF export factor family member 14", "gene_name": "Alyreffm17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADKMDMSLEDIIKLTKIQQRRHDRPDSRVNRGTGSKRYRPAFTHGGRNRLAPYCRPKQLPDKWQHDLFIGGFRGQNHVDTGGKLFLSNLHFGVSDADIQLLFAEFGTLKKSAVHYDRCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQLATSQIDRQGRPAQSKNRGGMTRNPGSGVLSGGGTKKWTLGGSQGRGRGTIRNSKLQQQQQQQKQKQQQQQQKQQQKQQQKQQQQLSAEELDAQLDAYQEMMDTS", "length": 261 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0R3T3-1", "protein_name": "Peptidase S1 domain-containing protein", "gene_name": "ENSRNOG00000067174", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRFLVLCLILSLGDYGAFPLIQSRIHRGCKGERHSQPWQVAMYHYDKAVGWGWHPSPTTMSTSPSHNKVRLGQHSLDADGDTGQDVPVRHSIPHPLYNRSLQMPTFLSPDADNSHNLMLRQLREPANTTEAVRVTEEPTEEAKLGSRCLASGWGSTRPDKCMPGMLQCVDLTLMSSDVCTYAYSQRVTESMLCAGHQEGSRDTCMGDSGTTLICDRMLQGITSWGGNPCA", "length": 230 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R777-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASKSKEKTLGSHYKILSYLGQGSFGTVNLAWHLKTQALVAIKMLEISKETISSILSERAILETLHHPNIIRLFQVLITSSHVNFVLEYAPGGSLFELIKEGGPLQEEVAKKIFGQTVSAVKYCHNLDIVHRDIKPQNILTDAEGNGKLTDFGLATKFRPGTLLKELCGTKEFYAPELVLREPYNGKKTDVWSLGVLLYFISTGYCPFRGVTTKDMEKKIATGTYTIPTYFSGQLENLIHQILTVSPEMRPSIEDIEKHPWVRKCEVNIPTITCPDYKIVEMLCGMGYNANKILESLQKKKYDEPMAAYLILKDKVRQEIEHGTTTSDMPVDQGPLPPQSPAHHSVSGLPLKRRASEPNFGLLHIWPPGEQVARHNVARSVSMPPIALYGTKKQNSTSTSALHSRPVASPCVCNTILEIEIPLPTKQDFDMKTSSPPQRIGYFQRLCQRIRDCLSRLCCFLWAPKVHSPRKWLP", "length": 474 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9M1-1", "protein_name": "Olfactory receptor family 52 subfamily N member 1B", "gene_name": "Or52n1b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLLNVSSLTPASLILNGIPGLEEVNLCIFFPLFTMYSIALTGNFGLIYLIYSEEVLHRPMYIFLALLSFTDVLMCTSTIPNTLFISWFNFKKIDFKACLAQMFFVHTFTGMESGVLVLMVLDLYIAMCYPLRYATILTNVVIAKAGMLTFLRGVALVIPFIFLTKRFPYCKGNVIPHTYCDHISVAKISCGNVQINAIYGLMVVLLIGDFDIPCITVSYTMILWAAVSLSSADARQKAFSTCTAHICAIVITYVPAFFTFFTHRFGWHTIPSHIHIIMANLYLLMPPTMNPIVYGVKTKQIQKRVIRFFFKGRENSSHKF", "length": 321 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9X6-1", "protein_name": "Paired immunoglobin-like type 2 receptor beta 1 like 2", "gene_name": "Pilrb2l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAWILLLLLLAACLHTGNSAGYQKTQDYGVNQPEQLTGIQGGSIEIPFSFYFPWELAKDPQMSIAWRWKVFFGEVIYNSTLLFLHEHFKGRLIMNWTQGQTSGVLRILNLKANDQSTYFSRIFLQATEGMKLWQSRAGTKLIIHALSTTMASPSIIPSAVPTAGLENTRGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWVIFLWWKQRLPTARISHQVSLHHTPCIPQSSMSSLWESELVAAGFSCESHSWITPTSAMGARIPSPWNQGPPVCLWA", "length": 289 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RAD6-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f19f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSTNQSSVSEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILVISTDSHLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILSSQAISFSGCLTQLYFLCVSVNMDNFLLAVMAYDRFVAICHPLYYTTKMTHQLCVLMVSGSWVTASLNALLHTLLMARLSFCGDNIIHHFFCDVTPLLKLSCTATNLNELMILTEGAVIMVTPFVCILISYIYITNAVLRVSSFRGGWKAFSTCGSHLAVVCLFYGTIIAVYFNPVSSHSSEKDTAATVLYTVVTPMLNPFIYSLRNNDLKGALRKVVHRKI", "length": 309 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RBH5-1", "protein_name": "Surfactant associated 2", "gene_name": "Sfta2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPSMCLFLLLTLLCSSLAGPTKVTLQVKLTEASQAKTSQDSGFLDMLQKICLLLHLSPGTNVTLHHKGPPHHLTCRA", "length": 78 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCJ6-1", "protein_name": "EF-hand domain-containing protein", "gene_name": "AABR07013776.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADQLTEEQIAEFKEAFPLFDRDGDQTVTTKELGMVMGSLGQNPTEAELQDMISEVDADGNGTINFPEFLTMMARKMKGTDVEEEIREAFRVFDKDGYTSAAEFRHVMTTLGEKLTDEEVDGMIREADMDGDGQVIYEEFVQMVTAK", "length": 147 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCP1-1", "protein_name": "Leukocyte immunoglobulin like receptor B3", "gene_name": "Lilrb3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSTLTALAYLGLILGSENPVLSGAFTKPTIKMVPSNVVTTGKQVTIFCEGSSHAKEYRLHKEGSPDYLTPTTFLETENKAKFSISPIQWNNAGQYWCSYRSLTNKLRQSDIMELVVTGVILGEVTLSALPSYVVTSGRNVTLQCASQVVYDRFILMKEDEKFSTAMPSWKIYPVLWGAIFTLGPVTSNQRWRFTCYGYYLSSSLIWSKPSNHLELLVSGTLHKPILWAHPGSMVTSGSPVTIWCEGDQETQTYVLYRQGSLESWNRQTQKDYNNKAEFTIPSVTYLNAGHYFCYSYTSAGWSEHSDTLELVVTGVYKKPIFLALKNPIVNLGVTVTISCTSNQSFNCFLLMDDDQKIYRFFDLQYSYSGESLARFQVGPITSRQRWRFRCYGYYTDNPQVWSEASDPLDFLVSGNLQKPTLWAEPGSVIESGNSVTIWCEGTMETQIYFLYKEGSPSSWLRQTPKEPGNKAMFFIAFMEKHNAGQYRCYCYNFGGWSQHSDTLELVMTGVHHGKPTLSAFPSPMVTSGGNVTLYCASSTIYDWYIVTGQDLKFSRFQRAQFIPTEMSQALFSEISVASRKKGPFRCYGFNESTPHLWSEASNPLEIHVSGVSRKPSLLNQQGPVLAPGENLTLRCSSELSYDRFSLSKEGRSDLPQLSVSQSQTGEYYANFFLYSVDFSIAGQYRCYGASRFSSEWSAPSVPQDILVTGHPPITPSLSVNPGTIVSSGENVTLLCQSSIPMDTFFLFKKGDAYPYMHQRLKFQGPQCKAEFSLSAVTPNIGGIFTCFGSQSSSPYLLSHPSVPVEIKVSGLAKYQKSLIWVSVVFFLLFFVLTLFFFLRLWHQNKHRKGVQTKIDLQHPEGAVEPKSIVGHLQKSSRPAPAIQEEILCEKRWPGREITEVSASDATVKVTRSADNVELGILSQHQDDPSIHLYAQVKPARLRRAQTTSSSLFPKELQHSKHRQKNRDQVIDQQADTSQDSHAVIYAQLHIMTPRQGRQTSLFPGRIC", "length": 1008 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCQ2-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100361204", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQSSIP", "length": 328 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCW7-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb1l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAQLLLLLLSAACLHTGNSAGYPKKNVFSVDQPAVLSGVQGGSIEISFSFYFPWELAKVPQMSIAWRWKNYHGEYIYNSTQPFIHEHFKGRLIVNWSQGQTSGVLRILNLKENDKATYFSRVFLPTTEGMKSWQSVAGTQLIIIHAPSTTVVSPSIIPSVVPIAGLEDTRGKRTPSLLNLGAMVRMVVSKVVVIIALYGWVIFLWWKQRSAWSLLSFLTTWKSEEQMQMNTAPAPKEFK", "length": 252 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCY4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "AABR07000137.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSAPLGSLGRKSKNQSLGLDMLGTVLSTDSLSCTFTVKYRSSPGQCSVNGKPLLLFNDERQNSPVGKPEKKGNATKVCAELNQSLKDIFQKMMNLESWLFESKGNHTLQVTVQSQYNQGIFMDGCWVFTIDRQYPFYFYPKIMTWRESHPDASRTVSQWQNNRQVAQSLRTCSMGDFSQCLRKLLTDSREVPRSTITTLDPTQPSSAIQIPPTVDSASSVFTTWSQYIFVLILCLAILIINALIP", "length": 246 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RD07-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000064269", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRMMAMQMMTNSISDAMERYKELIQVNSSYNIRQSQLLREQAQLKNNIQILLNEKRELLVEETELPASSVEAKRLCEEAGMNICDPRAKQQQV", "length": 93 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RDP5-1", "protein_name": "Zinc finger protein 353", "gene_name": "Zfp353", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVAETPGASQTVPCNTQPSPVESSQLVSGQSSEMPTWKKTVMASACCNPQETACTQNSTAHPGKASDFYFGEPSETASFIQQVVSAEQKSSPAGSCLMNLSSTTKSCLSHPLKTEVLDTRKTLCNEGHWGRTLNSDKTLLIQITTMYESQWRTLGNHPVAPSGYHEGQAPNMDHLVDSVSNQTFIGDLEMEPSCNHVLYTDQFITSFSEQNPFGDQQRSPVADNRFYADQKILPNGYQTFYEPQMSTNYQITCVCGQNVCRCQEILLSGEHLLSEYQTSGYRYDQDLIVNLQVTSPIGGEPLHDSQIPNSNFDTTSCGTKRTTSSEEDNLAWHPETSLSSEETFLDQMRTSVDQNVYPSHNGTLKIEESLEPQVTSLSNQAPYVGESSDTSNSPLIQIQPQEISSASGLDQGQHPEIKLDLKTQSPVSLKNPHNSKRYCCTYQGCKKSYKKSQHLKDHMKKHTGVKPYMCNKPGCDWKFFRLVDLNRHKQKHSGERPYPCPMCNKNYSRFYYLKQHLRSHIQASPTTAT", "length": 530 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M9MSI7-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG42818", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MFIHQREQLPFKHNEQDPNYLAPVIQKRKPMDKDPRNPLKRLKFLQEFPTQSSKGDLDDLKYPTQLEGRHDSPKYDKTFHTEIHANNETDSQELENIILEKNLQDSKTEFQENRASQPKNMHSFQIPEAIESHFNNKELQNENDLHKGLKQQYRSGSEQDKSGPENVREIASKLILQWAENQRSLLDSFVKAITDVLKVHDSKLNMKINISPRDIMILKDMLKQLLESIMQLREGSTSTRARIVLNKWIETQKSLIDSFSQAIQNTNQNVDNIANVYEVMENLNKNLRELVILLSDKESFPTTESSSSQQTTSIYATTTFYLTSSTFGSTHPIVDENINRVNIMGNLIKGLRNIMVQMDETNKTSSSTSYTTTESTYIQPSTSTYLNAEVTTSHPTTSTYEVTNIITDESKIKDMFNLIKGIEDLISQYNGKHKFTSTTSLTGKSNSREPTMTTYSSAGGITSHSFTTTSPKTVTTSSSHSTTESSPSHPTTSNYEVTVFDQDSHKFKVMKNLIKELKGLIEHFSDTKNITSTTYSTGDSKSFQPTATTPDSTDRSSSQPITFPESTTSTTNLQSTITNHLSTESTSSQLNTTLSITGTTTPNLTTSTHDFKDQINDDDSKSLKHLIKILSDLVYSLNDKNNIKSTSQLTTESTFNSSINITNSTTVASSTFSTTESMAIHSTPYLSTREITVFQFNDVENINPIISNNSTTVTTNIHSSTYTTSTTDNTTSYPNLSTTESSPTFDSTISHSNTSSQTRSLGSYKDKIKNIVELLKKLRKIQKTLADKSKGQLSPMLISRIKAVLKQIVAGNIDSVNGDSTELEILLSTTVNPNEDTTDLTMEKLLKLFDDFERMYNVLLDDSIQSTTQSTTQNNTIFSTTYSTIFSTTQSISTTSPTQYALTSSTPNTSTTSHSSTPSSINNLRSDESNNHQPIVDAIQQLKMALYHDFYAFKKSQEERMEKILQLLNGKPIDRRTKTIAKPRTIRKKVSREIQKRNSDVKEDKIHHYKADKFIKNPKNGNQDSHIPKPILNSARSKIKDVPLKLSAIKVNGGLKHLPSKRKANEEVSAMHEIFPEPVSILPHK", "length": 1085 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "O08640-1", "protein_name": "Keratin-associated protein 14", "gene_name": "Krtap14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSCNSCSGTFSQSFGGQLQYPISSCGSSYPNNVFYSTDLQTPITHQLGSSLHSGCQETFCEPTNCQTAYVVSRPCQRPFYSQRIRGPCRPCQSTFSGSLGFGSRGFQSFGCGYPSQGFGSHGFQSVGCGTPTFSSLNCGSSFYRPTCFSTKSCQSVSYQPTCGTGFF", "length": 167 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O21032-1", "protein_name": "Large ribosomal subunit protein uL16m", "gene_name": "mrpl16", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIPNRQKFTKNHKRNLITKETRKTGLVLGNYGIKATETGYLKMKQMERIKGDLVKKLKDNMDIYFNFYPLFGLTNKGTARMGAGKGEVSEWYVLVKKGSIVVEFIKSRMTAGAMQKVIRYSANKWPIKVRMTQIKQGLYEKKI", "length": 144 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21042-1", "protein_name": "Cytochrome c oxidase subunit 1+2", "gene_name": "2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKILEIYDKQIAEKEGNIFIFISKWIISVDHKNIGTMYTNFSILAGIVGTLLSLVIRMELSTGNMLDGDGQQYNVIVTAHGLIMIFFVVMPAMLGGFANWFIPIMVGSPDVAFPRLNNISLWLIIVSFFLLLTSSCVGIGVGTGWTVYPPLSTMEYHPGHAVDVGILSLHIAGASSLLGAINFLTTVFNMKIAGLSWSKVSLFVWSILITAVLLVLSLPVLAGGLTMLITDRNFETTFFDPIGGGDPILYQHLFWFFGHPEVYILILPGFGLVSIILSKYSNKGIFGVKGMISAMSAIGFLGFLVWAHHMYTVGLDVDTRAYFTAATMIIAIPTGIKIFSWLATLWGGVIKITTPMLFVIGFLVLFTIGGLTGVVLANGGLDISLHDTYYVVAHFHYVLSMGAIFAIFAGYYYYYSIMNSTRLFGVVRYNEQLGRIHFWTMFIGVNVTFFPMHFLGLAGMPRRIGDYPDAYIGWNLIASYGSLITAFGLLFFVVNIFTPYIRRSVNIKNGAIILMGLDFARDWQIGFQDPATPIMEGIIDLHNYIFFYLIVVAVFIGWVMGRILWRFSYKWSYPTIGDIEIFKNFTAYNQIIHGTVIEIVWTLIPTVILYLIAIPSFTLLYAMDEIINPTVTIKIIGHQWYWSYEYGDNASNLIEFDSYMVYERDLAEGQLRLLEVDNAMVVPVKTHIRLIITSGDVLHSWAIPSFGIKVDAVPGRLNQIGLYVKREGTFYGQCSELCGVDHGFMPIKVQAVKLGEYFSKLNEK", "length": 764 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21049-1", "protein_name": "Cytochrome c oxidase subunit 3", "gene_name": "cox3", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKGFFENLFRQNVRSVINTGKKVGARAAAREIINQEWGYPLANHEVLFLTNVYQPKHMKRHPFHIVRGTVAPLAVTLPLGFFVLNYFGVISSKLGLLIALSSFIGGLVIWTISIIFDSLYDQQHTYEVKRGLVMGMMMFIISEVMFFFSFFWSYFYISLSPNIAIGCVWPPYGLTVYSYMGLPLLNTVLLLLSGAILTDGYTILTEQKAVHEKNEKVLAVEEAFKNLMNLYKTKNSINTLTFVDERRDKFFGKESRQEDKIAEQKLIAISAGVKELRDLDWDLYFFENPENIEPNYKEPTNLSVIEYALITIYLKKRNKVIKTRLYFTLLCAVVFLACQGYEYFFAPFSMNDGIYGSLFFLLTGFHGFHVLVGSILIGIITIRFIVGNFNLLNVGTNFQIYKNKSTGFACTLFYWHFVDIVWIFLYIVIYWWGSR", "length": 435 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O23373-1", "protein_name": "Formin-like protein 3", "gene_name": "FH3", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGRLRLAFLAISLVVFVCVSEEIFSRGGLNLLRFSVYGEDVAEQTWIHQNPRRKLISYPKKFSVSAPNLAFGPAPSFAPGPGPSFAPGPAPNPRSYDWLAPASSPNEPPAETPDESSPSPSEETPSVVAPSQSVPGPPRPPPQREKKDDILMKLIIAVASTAVLTFVFVALMFLCCFKRNCNNAVGSRDGPRDEGPLLRLSTGSTENSPTVASTSRKMFSVASSKKRSFLSRVSLKRNGHEFSTAESSSAAGLPPLKLPPGRSAPPPPPAAAPPPQPPPPPPPKPQPPPPPKIARPPPAPPKGAAPKRQGNTSSGDASDVDSETGAPKTKLKPFFWDKMANPDQKMVWHEISAGSFQFNEEAMESLFGYNDGNKNKNGQKSTDSSLRESPLQYIQIIDTRKAQNLSILLRALNVTTEEVVDAIKEGNELPVELLQTLLKMAPTSEEELKLRLYSGDLHLLGPAERFLKILVDIPFAFKRIESLLFMISLQEEVSGLKEALGTLEVACKKLRNSRLFLKLLEAVLKTGNRMNVGTFRGDAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGVRALRLQSRSFSSVKTDDSNADSSPQSVERYRSTGLQVVTGLTTELEDVKRAAIIDADGLAATLANISGSLTNAREFLKTMDEESDFERALAGFIERADADFKWLKEEEERIMVLVKSSADYFHGKSAKNEGLRLFAIVRDFLIMLEKVCREVKETTKTTNHSGKKESEMTTSDSNQPSPDFRQRLFPAIAERRMDSSDDSDDEEDSSPS", "length": 785 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O35698-1", "protein_name": "RNA-binding motif protein, Y chromosome", "gene_name": "Rbmy", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKRSATSAQTRSNTGLRGREPHRREISRNMPRGEPASSRRDEYPLPRDYGQSSNDRKYESTSRGYCDYGNYHSREESASKVFSDHAGYLGGRDRDFSEYLSGNSYRDTYRSYGRFHEAPSARGGNNRYDDYSNSQDGYGGRGEPYISNRSNIYSSDYERSGRQEVLPPPIDREYFDREGRQERGHSPKDGLYSASRESYSSNTKIWGIPWRSWRKQI", "length": 380 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O60309-1", "protein_name": "Leucine-rich repeat-containing protein 37A3", "gene_name": "LRRC37A3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTSAQCPALACVMSPLRFWGPWPLLMWQLLWLLVKEAQPLEWVKDPLQLTSNPLGPPEPWSSHSSHFPRESPHAPTLPADPWDFDHLGPSASSEMPAPPQESTENLVPFLDTWDSAGELPLEPEQFLASQQDLKDKLSPQERLPVSPKKLKKDPAQRWSLAEIIGIIHQLSTPQSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQLPQLLEEEPSSMQQEAPALPPESSMESLTLPNHEVSVQPPGEDQAYYHLPNITVKPADVEVTITSEPTNETESSQAQQETPIQFPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESSREVESSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASPSVSVKPPDVQLTIAAEPSAEVGTSLVHQEATTRLSGSGNDVEPPAIQHGGPPLLPESSEEAGPLAVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSLTHQEAPAQTPEFPNVVVAQPPEHSHLTQATVQPLDLGFTITPESMTEVELSPTMKETPTQPPKKVVPQLRVYQGVTNPTPGQDQAQHPVSPSVTVQLLDLGLTITPEPTTEVGHSTPPKRTIVSPKHPEVTLPHPDQVQTQHSHLTRATVQPLDLGFTITPKSMTEVEPSTALMTTAPPPGHPEVTLPPSDKGQAQHSHLTQATVQPLDLELTITTKPTTEVKPSPTTEETSTQLPDLGLAIIPEPTTETGHSTALEKTTAPRPDRVQTLHRSLTEVTGPPTELEPAQDSLVQSESYTQNKALTAPEEHKASTSTNICELCTCGDEMLSCIDLNPEQRLRQVPVPEPNTHNGTFTILNFQGNYISYIDGNVWKAYSWTEKLILRENNLTELHKDSFEGLLSLQYLDLSCNKIQSIERHTFEPLPFLKFINLSCNVITELSFGTFQAWHGMQFLHKLILNHNPLTTVEDPYLFKLPALKYLDMGTTLVPLTTLKNILMMTVELEKLIVPSHMACCLCQFKNSIEAVCKTVKLHCNSACLTNTTHCPEEASVGNPEGAFMKVLQARKNYTSTELIIEPEEPSDSSGINLSGFGSEQLDTNDESDVTSTLSYILPYFSAVNLDVKSLLLPFIKLPTTGNSLAKIQTVGKNRQRLNRVLMGPRSIQKRHFKEVGRQSIRREQGAQASVENTAEEKRLGSPAPRELKQPHTQQGPEKLAGNAVYTKPSFTQEHKAAVSVLKPFSKGAPSTSSPAKALPQVRDRWKDLTHAISILESAKARVTNMKTSKPIVHSRKKYRFHKTRSRMTHRTPKVKKSPKVRKKSYLSRLMLSNRLPFSAAKSLINSPSQGAFSSLRDLSPQENPFLEVSAPSEHFIENNNTKDTTARNAFEENVFMENTNMPEGTISENTNYNHPPEADSAGTAFNLGPTVKQTETKWEYNNVGTDLSPEPKSFNYPLLSSPGDQFEIQLTQQLQSVIPNNNVRRLIAHVIRTLKMDCSGAHVQVTCAKLVSRTGHLMKLLSGQQEVKASKIEWDTDQWKTENYINESTEAQSEQKEKSLEFTKELPGYGYTKKLILALIVTGILTILIILLCLIEICCHRRSLQEDEEGFSRDSEAPTEEESEALP", "length": 1634 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "O80489-1", "protein_name": "small monomeric GTPase", "gene_name": "SARA1A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MFLFDWFYGILASLGLCKKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKINFKAFDLGGHQIARRVWKDCYAKVDAVVYLVDAYDRDRFVESKRELDALLSDEALANVPCLILGNKIDIPYASSEDELRYYLGLTNFTTGKGIVNLEDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYIK", "length": 193 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80614-1", "protein_name": "RING-type E3 ubiquitin transferase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSDMRDERFFYHRYLSVTNRTTPTTATNLPTSTSNMRSTSLMTPRVAHTSMSSGGDFPDDRFFHARHQSATDRAASNRSRAIMPISTTNVPSSTSNSPRVLQTSMSRRGTSPMSSSTRRSVQASMSARETVPSSTSTRSMQTSTSTPEIMPTSSRNVITSSEEVANTFTQTSYIQFGSLWETNTTPSTRSWPTVPSSNSPRVLQTSMSRRGTSPMSSSTRRNVQSSMSGRETVSSSTSTSSMQTSMSTPEIMPTSSRNVITRSEEVANTFSTQTPYIQFGRLWETNTTSSTRSRTTVPTSTTNVPSSNSSRVLQTSMSTRGTFPMSSSTRMSVQASMLAPGTVSSSMSTVEIMPTSARNMITMSEEVANSFTQTSYIQFGSLWETFKTVTKLSRVAMVENGECVICLEEWRKETYVTSSTSNMRTSSLMTLTRFIDEQISLRATVSSTRTTARLLTNESPATIRAVAMLPRVAMVEKGECVICFEEWSKSDMETELPCKHKYHLECVEKWLKIHTSCPQCRYKLSCVYKSFLML", "length": 535 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81153-1", "protein_name": "Proteasome subunit beta type-3-B", "gene_name": "PBC2", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFICTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYVVTPKEVKERILKGRMD", "length": 204 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P00757-1", "protein_name": "Kallikrein 1-related peptidase-like b4", "gene_name": "Klk1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYNDKYQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLICDGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMANNP", "length": 256 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P01241-1", "protein_name": "Somatotropin", "gene_name": "GH1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFEEAYIPKEQKYSFLQNPQTSLCFSESIPTPSNREETQQKSNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P02762-1", "protein_name": "Major urinary protein 6", "gene_name": "Mup6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04071-1", "protein_name": "Kallikrein 1-related peptidase b16", "gene_name": "Klk1b16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSRIVGGFKCEKNSQPWQVAVYYHKEHICGGVLLDRNWVLTAAHCYVDECEVWLGKNQLFQEEPSAQNRLVSKSFPHPGFNMTLLTFEKLPPGADFSNDLMLLRLSKPADITDVVKPIDLPTKEPKLDSTCLVSGWGSITPTKWQKPDDLQCMFTKLLPNENCAKAYLLKVTDVMLCTIEMGEDKGPCVGDSGGPLICDGVLQGTVSIGPDPCGIPGVSAIYTNLVKFNSWIKDTMMKNA", "length": 261 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04644-1", "protein_name": "Small ribosomal subunit protein eS17", "gene_name": "Rps17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKNLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTVGMNFKTPRGAV", "length": 135 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P05817-1", "protein_name": "Prestalk D11 protein", "gene_name": "ampA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKLILLLILSSCLVLSVKSEVNVDCSLVRCAQPICKPHYRLNMTDSCCGRCEPCTDVACTLQVKYCQDGEVPTGCCPCTLPPTKPDCSLVKCARPVCKPYYRLNMTDSCCGRCEPCTGVACTLQIKYCKDGEVPTGCCPCTPQPTKKPDCSKVPCPKILKYCQEGELPTGCCPCTPQPTKKPDCSRVPCPKILKYCKEGELPTGCCPCTPQPTKKPDCSDVMCTMDIRYCKNGELPTGCCPCTPQETKVPDCSKAMCTMDIKYCKPGEKPFGCCPCRENLTQ", "length": 284 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P06325-1", "protein_name": "T-cell receptor gamma chain V region 5/10-13", "gene_name": "Tcrg-V1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLLRWPTFCCLWVFGLGQLEQTELSVTRATDESAQISCIVSLPYFSNTAIHWYRQKAKKFEYLIYVSTNYNQRPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVCRSGTSWVKIFAKGTKLVVIPP", "length": 135 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P06349-1", "protein_name": "Histone H1t", "gene_name": "H1-6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSETAPAASSTLVPAPVEKPATKRRGKKPGMATARKPRGFSVSKLIPEALSMSQERAGMSLAALKKALAAAGYDVEKNNSRIKLALKRLVNKGVLVQTKGTGASGSFKLSKKAASGNDKGKGKKSASAKAKKLGLSRASRSPKSSKTKVVKKPKATPTKGSGSRRKTKGAKGLQQRKSPAKARATNSNSGKSKMVMQKTDLRKAAGRK", "length": 208 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P07628-1", "protein_name": "Kallikrein 1-related peptidase b8", "gene_name": "Klk1b8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRFLILFLALSLGGIDAAPPLQSRVVGGFNCEKNSQPWQVAVYDNKEHICGGVLLERNWVLTAAHCYVDQYEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLTLKEIPPGADFSNDLMLLRLSKPADITDAVKPITLPTKESKLGSTCLASGWGSITPTKWQKPDDLQCVFLKLLPIKNCIENHNVKVTDVMLCAGEMSGGKNICKGDSGGPLICDSVLQGITSTGPIPCGKPGVPAMYTNLIKFNSWIKDTMTKNS", "length": 261 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P07647-1", "protein_name": "Submandibular glandular kallikrein-9", "gene_name": "Klk9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWFLILFLALSLGQIDAAPPGQSRVVGGYNCETNSQPWQVAVIGTTFCGGVLIDPSWVITAAHCYSKNYRVLLGRNNLVKDEPFAQRRLVSQSFQHPDYIPVFMRNHTRQRAYDHNNDLMLLHLSKPADITGGVKVIDLPTEEPKVGSICLASGWGMTNPSEMKLSHDLQCVNIHLLSNEKCIETYKNIETDVTLCAGEMDGGKDTCTGDSGGPLICDGVLQGLTSGGATPCAKPKTPAIYAKLIKFTSWIKKVMKENP", "length": 259 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P08932-1", "protein_name": "T-kininogen 2", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKLITILLLCSRLLPSLAQEEGAQEMDCNDETVFQAVDTALKKYNAELESGNQFLLYRVTEGTKKDGAETLYSFKYQIKEGNCSVQSGLTWQDCDFKDAEEAATGECTTTLGKKENKFSVATQICNITPGKGPKKTEEDLCVGCFQPIPMDSSDLKPVLKHAVEHFNNNTKHTHLFALTEVKSAHSQVVAGMNYKIIYSIVQTNCSKEDFPFLREDCVPLPYGDHGECRGHTYVDIHNTIAGFSQSCDLYPGDDLFSLLPKKCFGCPKNIPVDSPELKEALGHSIAQLNAQHNHLFYFKIDTVKKATSQVVAGTKYVIEFIARETNCSKQTNTELTADCETKHLGQSLNCNANVYMRPWENKVVPTVRCQALDMMISRPPGFSPFRLVQVQETKEGTTRLLNSCEYKGRLSKAGAGPAPDHQAEASTVTP", "length": 430 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C0S7-1", "protein_name": "Histone H2A.Z", "gene_name": "H2az1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKTV", "length": 128 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C2B7-1", "protein_name": "Large ribosomal subunit protein mL52", "gene_name": "MRPL52", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAALGMLLSTGVRRLHCGSAARAGSQWRLRQGLAANPSGYGPLTELPDWSYADGRPAPPMKGQLRRKAQREKFARRVVLLSQEMDAGLQAWQLRQQEKLQEEKRKQQNALKPKGVLLQNPGPSQ", "length": 124 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P0C644-1", "protein_name": "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1", "gene_name": "Ppip5k1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWSLTANEDEDESATAHFFLGAGDEGLGTCGIGMRTGESDSELLEDEEDEVPPEPQIIVGICAMTKKSKSKPMTQILERLCRFDYLTVVILGEDVILNEPVENWPPCHCLISFHSKGFPLDKAVAYSKLRNPFLINDLTMQYYIQDRREVYRILQEEGIDLPRYAVLNRDPACPEECNLIEGEDQVEVNGAVFPKPFVEKPVSAEDHNVYIYYPSSAGGGSQRLFRKIGSRSSVYSPESSVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVMLTAMEKLVARKVCVAFKQTVCGFDLLRANGHSFVCDVNGFSFVKNSMKYYDDCAKILGNTIMRELAPQFQIPWSIPTEAEDIPIVPTTSGTMMELRCVIAIIRHGDRTPKQKMKMEVTHPRFFALFEKHGGYKTGKLKLKRPEQLQEVLDITRLLLAELEKEPGAEIEEKTGKLEQLKSVLEMYGHFSGINRKVQLTYYPHGVKASSEGQDLQREPPAPSLLLVLKWGGELTPDGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQHRVKARLHHILQQDAPFGPEDYDQLAPTGSTSLLNSMSVIQNPVKVCDQVFALIENLTHQIRERMQDPSSVDLQLYHSETLELMLQRWSKLERDFRQKSGRYDISKIPDIYDCVKYDVQHNGSLGLQGTAELLRLSKALADVVIPQEYGISREEKVEIAVGFCLPLLRKILLDLQRTHEDESVNKLHPLYSRGVLSPGRHVRTRLYFTSESHVHSLLSVFRYGGLLDETKDAQWQRALAYLSAISELNYMTQIVIMLYEDNTRDPLSEERFHVELHFSPGVKGVEEGSAPAGCGFRPASSENEEMKTDPGSIENLCPAKPSDEPDRALQTSPQPVEGTGLPRRSPLIRNRKAGSMEVLSETSSSRPGGYRLFSSSRPPTEMKQSGLGSQCTGLFSTTVLGGSSSAPNLQDYARTHGKKLPPAGLKHRDELLFVPAVKRFSVSFAKHPTNGFEGCSMVPTIYPLETLHNALSLRQVSEFLTKVCQRHTDAHAQASAALFDSMHNHQASDNPFSPPRTLHSPPLQLRHRSEKPPWYSSGPSSTVSSAGPSSPTTVDGNSHFGFSDQSSVNTQMIEEKQGLGLLQETPGDGTPEFHIELAESTQSPQEPPVEISPPGSQDDTEVNQTCQEVPDTIQPCHDILEEIGQPNQEVPDISQLLLKNHDTATNTCQPCQASQLSKKVYEEICQLCQDNPEESNQLCQEVSVELGRMVHRFPVSIGSTTQETLMEIGRPTQEIPEEPCQEFSEKVGMLTQKASAISELSQDILETDNPSQELSEETDLQAQEVSEEIDQEPEVVDELSNEDIS", "length": 1434 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C7H9-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 7", "gene_name": "USP17L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLGGDWQFNHFSKLTSSRLDAAFAEIQRTSLSEKSPLSSETRFDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQKIGNTFYVNVSLQCLTYTLPLSNYMLSREDSQTCHLHKCCMFCTMQAHITWALHSPGHVIQPSQVLAAGFHRGEQEDAHEFLMFTVDAMKKACLPGHKQLDHHSKDTTLIHQIFGAYWRSQIKYLHCHGVSDTFDPYLDIALDIQAAQSVKQALEQLVKPKELNGENAYHCGLCLQKAPASKTLTLPTSAKVLILVLKRFSDVTGNKLAKNVQYPKCRDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATQESTLDHWKFPQEQNKTKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSTKPTDQESMNTGTLASLQGSTRRSKGNNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0CW02-1", "protein_name": "Lymphocyte antigen 6C1", "gene_name": "Ly6c1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTSHTTKSCVLILLVALLCAERAQGLQCYECYGVPIETSCPAVTCRASDGFCIAQNIELIEDSQRRKLKTRQCLSFCPAGVPIRDPNIRERTSCCSEDLCNAAVPTAGSTWTMAGVLLFSLSSVVLQTLL", "length": 131 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DKL4-1", "protein_name": "Spliceosome-associated protein 130 A", "gene_name": "SAP130A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DKL6-1", "protein_name": "Spliceosome-associated protein 130 B", "gene_name": "SAP130B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DML3-1", "protein_name": "Chorionic somatomammotropin hormone 2", "gene_name": "CSH2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEETYIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLRSMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DMV2-1", "protein_name": "Cancer/testis antigen family 45 member A9", "gene_name": "CT45A9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETAFSPKSQQEINADIKRQLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DOV1-1", "protein_name": "Interferon-activable protein 211", "gene_name": "Ifi211", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLRGLECINKHYFSLFKSLLARDLNLERDNQEQYTTIQIANMMEEKFPADSGLGKLIEFCEEVPALRKRAEILKKERSEVTGETSLEKNGQEAGPATPTSTTSHMLASERGETSATQEETSTAQAGTSTAQAGTSTAQAGTSTAQKRKSMREEETGVKKSKAAKEPDQPPCCEEPTAMCQSPILHSSSSASSNILSAKNQKSQPQNQNIPRGAVLHSEPLTVMVLTATDPFEYESPEHEVKNMFHATVATVSQYFHVKVFNIDLKEKFTKNNFITISNYFESKGILEINETSSVLEAAPKQMIEVPNCITRNANASPKICDIQKGTSGTVFYGVFTLHKKKVKTQNTSYEIKDGSGSIEVVGSGQWHNINCKEGDKLHLFCFHLKRERGQPKLVCGDHSFVKVTKAGKKKEASTVQ", "length": 425 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DTA3-1", "protein_name": "Speedy protein E11", "gene_name": "SPDYE11", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVSGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD3-1", "protein_name": "Speedy protein E14", "gene_name": "SPDYE14", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD4-1", "protein_name": "Speedy protein E15", "gene_name": "SPDYE15", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW11-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 6", "gene_name": "TAF11L6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW12-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 7", "gene_name": "TAF11L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW13-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 8", "gene_name": "TAF11L8", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW14-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 10", "gene_name": "TAF11L10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P11588-1", "protein_name": "Major urinary protein 1", "gene_name": "Mup1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEKHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P11589-1", "protein_name": "Major urinary protein 2", "gene_name": "Mup2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLEKSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAKLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P13255-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "Gnmt", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVDSVYRTRSLGVAAEGIPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILSTGCAPPGKNIYYKSDLTKDITTSVLTVNNKAHMVTLDYTVQVPGAGRDGAPGFSKFRLSYYPHCLASFTELVQEAFGGRCQHSVLGDFKPYRPGQAYVPCYFIHVLKKTG", "length": 293 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P13675-1", "protein_name": "Y-linked testis-specific protein 1", "gene_name": "Ssty1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVSCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYFVKYDGIDSIYVLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFERKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P15515-1", "protein_name": "Histatin-1", "gene_name": "HTN1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKFFVFALVLALMISMISADSHEKRHHGYRRKFHEKHHSHREFPFYGDYGSNYLYDN", "length": 57 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P16374-1", "protein_name": "Zinc finger protein 60", "gene_name": "Zfp60", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANSSSQHMVCGSVTFRDVAVDFSQEEWACLDATQKVLYRNIMLETYSNLVAVVGRCIPKPDLIVLLEPEKEPWMAVKKETGRPSQGLETGFEAENRSPKNHVYNKKLPKQTIQQLSKTSDVQGVSVSNGPGYSVIKEPQNYQEGDANRNITNKKEMSTYTSKTLAHNKEKPYKCKDCGKCFGCKSNLHQHESIHTGEKPYECKDCGKTFRLPQMLSRHQKSHSDERPFECNICGKSFHLPTLLQYHKNIHTGLKPFECEECGKSFKSFNRISTLFQHRTIHAGMKPYKCNVCGKAFNRRSNLLQHQKIHSEDRPFHCKVCGKAFTVLAQLTRHENIHTEDKSFECKQCGKIFSNGSYLLRHYDTHTNEKPFECNICGKAFRLHLYLSEHQKTHTDEKPFKCKLCESAFRRKYQLSEHQRIHTDGKPYQCKDCWEFFRRRSNFIEHQSIHTGKKPFECKDCGKVFRLNIHLIRHQRFHSDEKPFECKECGKAFHFSSQLNNHKTSHTGQTPFECKECGKSFKRVSSLVEHRIIHSGVKPYKCNACGRAFNRRSNLMQHEKIHSDERPFECKDCGKAFTVLAQLTRHQTIHNGKKSYECEQCGSAFRLPYQLTQHQRIHYDVKPFQCKECGRAFVRSTGLRIHERIHTGEKPFQCKECGEAFQYHYQFLGHFRIHTGKNPYECSECGKYFTYGRDLKVHQSIHNLEKP", "length": 707 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P20816-1", "protein_name": "Cytochrome P450 4A2", "gene_name": "Cyp4a2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGFSVFSPTRSLDGVSGFFQGAFLLSLFLVLFKAVQFYLRRQWLLKALEKFPSTPSHWLWGHNLKDREFQQVLTWVEKFPGACLQWLSGSTARVLLYDPDYVKVVLGRSDPKPYQSLAPWIGYGLLLLNGKKWFQHRRMLTPAFHYDILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIFHYVSLMTLDTVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNLIFFRVRSAFYGNSIIYNMSSDGRLSRRACQIAHEHTDGVIKTRKAQLQNEEELQKARKKRHLDFLDILLFAKMEDGKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGDGTSVTWDHLDQMPYTTMCIKEALRLYSPVPSVSRELSSPVTFPDGRSIPKGIRVTILIYGLHHNPSYWPNPKVFDPSRFSPDSPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPVPMPRLVLKSKNGIHLRLKKLR", "length": 504 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P21571-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "Atp5pf", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQRIFRLSSVLRSAVSVHLRRNIGVTAVAFNKELDPVQKLFLDKIREYKAKRLASGGPVDTGPEYQQEVDRELFKLKQMYGKGEMDKFPTFNFEDPKFEVLDKPQS", "length": 108 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P22237-1", "protein_name": "NADH-ubiquinone oxidoreductase subunit 9", "gene_name": "nad9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKDYKNELKVKINLGEHLRLSIPGLVKKIMYKTHYLEIQVEKEKMLTVLKYLKEASKYQCNMLLDIVCVDCLNIEEIKIGRFKLIYVLNSIYNNTRVHLSTYVENNGIIETTSGLFESSVWLEREIWDMFGIYFEKHPDLRRILTDYGFVGYPLKKDFPITGYLEVYYDVNDKKIIYKPIELMQEYRNYNFGAVWGDYERKVYLENIIK", "length": 209 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P22283-1", "protein_name": "Cystatin-related protein 2", "gene_name": "Crp2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYKTLCGTQLLLAIFVLFLNFSHATAKGTRGPMEIFKKNFMEKNKLNDVYDIFKFLYNKFSHDTYLSNIKNQSFTMNTWGFGEIEVVKTKCRKIDSDFYKCSFQWEFCNIKRTPGVTIYYITLPGSVRCRKLLSKLVNCPFEEQTEQLKREICYFQLYPDYIEQNIRSVRFNCYTK", "length": 176 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P23266-1", "protein_name": "Olfactory receptor 1f45", "gene_name": "Or1f45", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILAIGTDSRLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILGSQAISFSGCLTQLYFLAVFGNMDNFLLAVMSYDRFVAICHPLHYTTKMTRQLCVLLVVGSWVVANMNCLLHILLMARLSFCADNMIPHFFCDGTPLLKLSCSDTHLNELMILTEGAVVMVTPFVCILISYIHITCAVLRVSSPRGGWKSFSTCGSHLAVVCLFYGTVIAVYFNPSSSHLAGRDMAAAVMYAVVTPMLNPFIYSLRNSDMKAALRKVLAMRFPSKQ", "length": 313 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24049-1", "protein_name": "Large ribosomal subunit protein uL22", "gene_name": "Rpl17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKKISQKKLKKQKLMARE", "length": 184 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24868-1", "protein_name": "G2/mitotic-specific cyclin-1", "gene_name": "CLB1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSRSLLVENSRTINSNEEKGVNESQYILQKRNVPRTILGNVTNNANILQEISMNRKIGMKNFSKLNNFFPLKDDVSRADDFTSSFNDSRQGVKQEVLNNKENIPEYGYSEQEKQQCSNDDSFHTNSTALSCNRLIYSENKSISTQMEWQKKIMREDSKKKRPISTLVEQDDQKKFKLHELTTEEEVLEEYEWDDLDEEDCDDPLMVSEEVNDIFDYLHHLEIITLPNKANLYKHKNIKQNRDILVNWIIKIHNKFGLLPETLYLAINIMDRFLCEEVVQLNRLQLVGTSCLFIASKYEEIYSPSIKHFAYETDGACSVEDIKEGERFILEKLDFQISFANPMNFLRRISKADDYDIQSRTLAKFLMEISIVDFKFIGILPSLCASAAMFLSRKMLGKGTWDGNLIHYSGGYTKAKLYPVCQLLMDYLVGSTIHDEFLKKYQSRRFLKASIISIEWALKVRKNGYDIMTLHE", "length": 471 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P25389-1", "protein_name": "Probable serine/threonine-protein kinase KCC4", "gene_name": "KCC4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTVANTETHSAAKPSSTIGPWKLGETLGFGSTGKVQLAQHERTGHRTAVKVISKSIFNNNGNHSNDDSVLPYNIEREIVIMKLLSHPNVLSLYDVWETNNNLYLILEYAEKGELFNLLVDHGPLPEREAINCFRQIIIGISYCHALGIVHRDLKPENLLLDSFYNIKIADFGMAALQTDADLLETSCGSPHYAAPEIVSGLPYEGFASDVWSCGVILFALLTGRLPFDEENGNVRDLLLKVQKGQFEMPNDTEISRDAQDLIGKILVVDPRQRIKIRDILSHPLLKKYQTIKDSKSIKDLPRENTYLYPLADSNNHTSASIDDSILQNLVVLWHGRHADDIVSKLKENGTNKEKILYALLYRFKLDSVRGSNKKNRNKIKKTKKNKRSSTLSSSSSLLLNNRSIQSTPRRRTSKRHSREFSSSRKRSSFLLSSNPTDSSPIPLRSSKRITHINVASANTQATPSGVPNPHKRNSKKRSSKRLSYMPNTKRSSLTSKSLSNFTNLIDDDDWEYIEKDAKRTSSNFATLIDEIFEPEKFELAKREKAELQRKVQEAKRQSVNAQKINEDEFGSEVSDGMKELKKINDKVSSPLINYEFSQQELLQDIDTLLTNRYQLSSYTRPISRLDPGLTPVTETLPNNLKEKTALLQDTEKKIIETIRRSKFLGSLLNVRGGLSPGKSELAPIEESPIVSTTPLIYNDRMEPRRISDVEVPHFTRKSKHFTTANNRRSVLSLYAKDSIKDLNEFLIKEDPDLPPQGSTDNESRSEDPEIAESITDSRNIQYDEDDSKDGDNVNNDNILSDFPQGVGISQEYDMKDKNPNQSPISKSAEPTLVVKLPSLSSFQGKNASGLGLYQREPSKVTLPSLTSNNSSVGENIEDGAEKGTESEKIAASLSDDDLKEDNDKKDNDTVNAPTTVKKPPNSVLLKKFSKGKILELEIHAKIPEKRLYEGLHKLLEGWKQYGLKNLVFNITNMIITGKLVNDSILFLRSTLFEIMVLPNGDGRSLIKFNKKTGSTKTLTKLATEIQIILQKEGVLDK", "length": 1037 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P28312-1", "protein_name": "Alpha-defensin 5", "gene_name": "Defa5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHEELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P28742-1", "protein_name": "Kinesin-like protein KIP1", "gene_name": "KIP1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MARSSLPNRRTAQFEANKRRTIAHAPSPSLSNGMHTLTPPTCNNGAATSDSNIHVYVRCRSRNKREIEEKSSVVISTLGPQGKEIILSNGSHQSYSSSKKTYQFDQVFGAESDQETVFNATAKNYIKEMLHGYNCTIFAYGQTGTGKTYTMSGDINILGDVQSTDNLLLGEHAGIIPRVLVDLFKELSSLNKEYSVKISFLELYNENLKDLLSDSEDDDPAVNDPKRQIRIFDNNNNNSSIMVKGMQEIFINSAHEGLNLLMQGSLKRKVAATKCNDLSSRSHTVFTITTNIVEQDSKDHGQNKNFVKIGKLNLVDLAGSENINRSGAENKRAQEAGLINKSLLTLGRVINALVDHSNHIPYRESKLTRLLQDSLGGMTKTCIIATISPAKISMEETASTLEYATRAKSIKNTPQVNQSLSKDTCLKDYIQEIEKLRNDLKNSRNKQGIFITQDQLDLYESNSILIDEQNLKIHNLREQIKKFKENYLNQLDINNLLQSEKEKLIAIIQNFNVDFSNFYSEIQKIHHTNLELMNEVIQQRDFSLENSQKQYNTNQNMQLKISQQVLQTLNTLQGSLNNYNSKCSEVIKGVTEELTRNVNTHKAKHDSTLKSLLNITTNLLMNQMNELVRSISTSLEIFQSDSTSHYRKDLNEIYQSHQQFLKNLQNDIKSCLDSIGSSILTSINEISQNCTTNLNSMNVLIENQQSGSSKLIKEQDLEIKKLKNDLINERRISNQFNQQLAEMKRYFQDHVSRTRSEFHDELNKCIDNLKDKQSKLDQDIWQKTASIFNETDIVVNKIHSDSIASLAHNAENTLKTVSQNNESFTNDLISLSRGMNMDISSKLRSLPINEFLNKISQTICETCGDDNTIASNPVLTSIKKFQNIICSDIALTNEKIMSLIDEIQSQIETISNENNINLIAINENFNSLCNFILTDYDENIMQISKTQDEVLSEHCEKLQSLKILGMDIFTAHSIEKPLHEHTRPEASVIKALPLLDYPKQFQIYRDAENKSKDDTSNSRTCIPNLSTNENFPLSQFSPKTPVPVPDQPLPKVLIPKSINSAKSNRSKTLPNTEGTGRESQNNLKRRFTTEPILKGEETENNDILQNKKLHQ", "length": 1111 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P29314-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPVARSWVCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED", "length": 194 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P33579-1", "protein_name": "Prolactin-8A5", "gene_name": "Prl8a5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELALSQPSFFGTLLMLVVSNLLLWEKAASIPACMVEDGGCWDPLREAFNSATQRAETLRNLSDQLYVEFFQNQFSSRQFADLSSQLIRKDETVLKAGTYCHSNRAKPKSRGVNIDIEEYLKMSINFCGFMDQPLFHLVIELSAMEGVPETILSKAKDLEENNRQLLDDLRWILTKVFPTAEIKEEFPSWDYLSFLKSSNKNHKFLAIFNLSSCLDYDTQVHYTLSQILNCLITGKDC", "length": 238 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P36006-1", "protein_name": "Myosin-3", "gene_name": "MYO3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MAVIKKGARRKDVKEPKKRSAKIKKATFDANKKKEVGISDLTLLSKISDESINENLKKRFKNGIIYTYIGHVLISVNPFRDLGIYTNAVLESYKGKNRLEVPPHVFAIAESMYYNLKSYNENQCVIISGESGAGKTEAAKRIMQYIAAASNSHSESIGKIKDMVLATNPLLESFGCAKTLRNNNSSRHGKYLEIKFNSQFEPCAGNITNYLLEKQRVVGQIKNERNFHIFYQFTKGASDTYKQMFGVQMPEQYIYTAAAGCTTADTIDDVKDYEGTLEAMRTIGLVQEEQDQIFRMLAAILWIGNISFIENEEGNAQVGDTSVTDFVAYLLQVDASLLVKCLVERIMQTSHGMKRGSVYHVPLNPVQATAVRDALAKAIYNNLFDWIVDRVNVSLQAFPGADKSIGILDIYGFEIFEHNSFEQICINYVNEKLQQIFIQLTLKAEQETYEREKIKWTPIKYFDNKVVCDLIEAKNPPGILAAMNDSIATAHADSNAADQAFAQRLNLFNSNPYFELRANKFVIKHYAGDVTYDINGITDKNKDQLQKDLIELIGTTTNTFLSTIFPDDVDKDSKRRPPTAGDKIIKSANELVETLSKAEPSYIRTIKPNQTKSPNDYDDHQVLHQVKYLGLQENVRIRRAGFAYRQTFEKFVERFYLLSPDCSYAGDYTWDGDTLEAVKLILRDAMIPEKEFQLGVTSVFIKTPESLFALEDMRDKYWYNMAARIQRAWRRFLQRRIDAAIKIQRTIREKKGGNKYVKLRDYGTKLLAGKKERRSMSLLGYRAFMGDYLSCNESKTKGSYIRRQVGIKDKVVFSIKGECLHSKFGRSAQRLKKVFILTKKTFYIIGQTREQNAMKYTQDYKIDVGKIKQVSLTNLQDDWMGVILVNSTQSDPLINTPFKTELMTRLKKLNEKIMIKVGPTIEYHKQPNKLHTVRSKISDSAPKYGDIYKSSTIYVRRGHPANSKSNKKPKNPGGLSGKPIKSKKSKHKSTHKHTHSHRSHRDAAKKQPLPSQKPVNPLSLAATAAQAAYNPKPDKTVPIKSSAIPAAKVSSKHSSKPSSKEKVAVKKASSSHKSSSAKQNQVSMPPSKGVEKNKEPLKETTATATANIPIPPPPPPMGQPKDPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKDTRNTVPVAATGAVNDVTNQKSSQIDNTISSAQEGVQFGSATVGPTSDNQSNPVGTFSDGLASALAARANKMRAESADDDDNDDGDDDDDW", "length": 1272 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P36046-1", "protein_name": "Mitochondrial intermembrane space import and assembly protein 40", "gene_name": "MIA40", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MLRNLVVRNACRNRPSIQVARGLCRHQTRRLMASSPQFGRNSNQEKTAGFIMGILSMAGALYFIAPNRKPLFASRKVESDKTAEEELSSGGEQSPENEDDNNSKSDENGDDNDSKNDETEAGPQLGGDKIGASKVAEDGELVVLAEEDNKSSEDKDTDESKVSTKDDEQSNEDNATANNQKDENISSENSEENTSDKTLDNNAGSSEKKDPEHSDDEKSQQGQSDDKTTTEDNNGEEESSKKTVSDSENSAKQSESSDEEKEELRKQEEKQMGPTEEEVQHEGAYNPDTGEINWDCPCLGGMAHGPCGEEFKSAFSCFVYSEAEPKGIDCVEKFQHMQDCFRKYPEHYAEQLKETSDDEEPQDKVKVNTIESAPNVSSAKENAAKKAEQSDVKKEPLNEESKP", "length": 403 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P37106-1", "protein_name": "Signal recognition particle subunit SRP54 1", "gene_name": "SRP-54A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIVNLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFKKEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDWSGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRIPLNQLFSMLPGISAEMMPKGHGEESRVKMKRYMTMMDSMTNKELDSPNPKIFNESRIMRIARGSGRLVREVMEMLEEYKRIAKTMKGIKIPKNGDMSKVIPPQMLKQMGGMSGLQSLMKQMGSAKDMMGMFGGGGK", "length": 479 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P38150-1", "protein_name": "Inactive deaminase YBR284W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MVQNNESVFFVECDSYKESPSTSPIRLDDLDGNDAVSDQGLAFDGDVGITSQARVRNPRAQIFEDSNTDVVLHLDDLDMVPLNTKFDMQMEMGSPMAMPAETPPPVEPLKTKDLAYSSLAHLPSYFFEQTHFRIDRKCLLEMSKLRRNYLTISKQDALSCPQLHSRVAGGYLKPVKEKLFGIRHFLDLEESNTVNLLQDGNYMTELFNSQINIPTFKEFREDFEWCLKIIRDRSLSRFSEKRLQYLVNKFPVFQHLHSKEEMRQSKKVPHKDFYNCRKIDLNLLLSGCFSQWQLTEFIWTKLRKEPDRVIHQAFNGSHITLSQLFKVNFEETGQFFNGLKIIDDSFLEWYKVIYLAKYHLVNDEMEIHTGSHGKQLRYYLIAKTFLEFDNYINGEYLAELLKTFLIKPQEESKYQLCQLSVDFQFYLHYDNSDVDNWWMVFANWLNHYNIFSNNIRWNIRISRIYPELYHTGKVKNFQEYLNLIFKPLFNAENYLHKSLGPILLKFLSQVSSIDLCIQDTDNYIWKNFTAVSCLPKDWTSGGDNPTISQYMYYVYVNLTKLNHIRQALHQNTFTLRSSCSPTSMNRTSQFSNTLNFTEHTEAILNNFLLACGGFLNAENLWNAPPSLVYLFYLSQIPMVVAPLNSIVDSKPTMLQEQAPTGLVLEPSKPYKKNPFMKFFEMGFKISLSSESILYNNSYTKEPIIEEYSVAASIYRLHSADLCELLRNSVITSGFSSTLKNKWLGVSLASHDYFVENTGFVDKWYDCKPNTSLEHNVPIIRRQYRSSTLAGEWRLIIA", "length": 797 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40002-1", "protein_name": "Transcriptional regulator MIT1", "gene_name": "MIT1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MDIEPTFKGYIEDEDDALLILQATLDGKLKHIPRRPYEIERPYLIVSGSIFVFIEEISGIKRWTDGVSWSPSRISGKFLIYKELDKENAGSNANATSSGSTDSAVITDGTSGARNNPSSSKIKLPPLKNHQFDLPPTMGHSSFESEQDTSISPSNRSNLPLKYTGLVKKTISVKLKRPPFNSIENLHIVSYYSVKDIKQNCLVTPKASPFLKDVRPSQELIVAMGNTTLGNVKNNSTTTGNGPNNINNKSNSSTPLNTVISTNNNSANINAAGSNQFTSANKNYYYKNDESSGYPITQFAPALPSTTLMYTANPPYITQSPDNTNATGMNTHVNNNNNNSNNSSNSNNSNNNNNNNNNNNNNNNNNINNINNVNTNAGNGNNPNRFHNASFAYNTTGDFINPQQQGQISYPFYYTTIPINNPNYYTTQPPNPVTNASTNENQGYSTSSTQHPYYGHPTESQSASAAAGATGTPGTAENVLPVSSMQPLLHQANNNSASSATSTAPYPVYSMNVNVPYYNSSASAYKRAQENTTSNTNAEPSGATSTNSGTMLSNPAYANSQYTPSQVYYQGFPQYAMASAQNPSMYQHQHQHPLPTVYPIATPQQNIMSSGHTLSTIGSDPQHHHYQQEPNDHKNFAMGHANNNILNITNNDTMNNLNTNTSTTTQ", "length": 666 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P42222-1", "protein_name": "Enolase-related protein 3", "gene_name": "ERR3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSITKVHARTVYDSRGNPTVEVEITTENGLFRAIVPSGASTGIHEAVELRDGNKSEWMGKGVTKAVSNVNSIIGPALIKSDLCVTNQKGIDELMISLDGTSNKSRLGANAILGVSLCVARAAAAQKGITLYKYIAELADARQDPFVIPVPFFNVLNGGAHAGGSLAMQEFKIAPVGAQSFAEAMRMGSEVYHHLKILAKEQYGPSAGNVGDEGGVAPDIDTAEDALDMIVKAINICGYEGRVKVGIDSAPSVFYKDGKYDLNFKEPNSDPSHWLSPAQLAEYYHSLLKKYPIISLEDPYAEDDWSSWSAFLKTVNVQIIADDLTCTNKTRIARAIEEKCANTLLLKLNQIGTLTESIEAANQAFDAGWGVMISHRSGETEDPFIADLVVGLRCGQIKSGALSRSERLAKYNELLRIEEELGDDCIYAGHRFHDGNKL", "length": 437 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P43356-1", "protein_name": "Melanoma-associated antigen 2", "gene_name": "MAGEA2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQQTASSSSTLVEVTLGEVPAADSPSPPHSPQGASSFSTTINYTLWRQSDEGSSNQEEEGPRMFPDLESEFQAAISRKMVELVHFLLLKYRAREPVTKAEMLESVLRNCQDFFPVIFSKASEYLQLVFGIEVVEVVPISHLYILVTCLGLSYDGLLGDNQVMPKTGLLIIVLAIIAIEGDCAPEEKIWEELSMLEVFEGREDSVFAHPRKLLMQDLVQENYLEYRQVPGSDPACYEFLWGPRALIETSYVKVLHHTLKIGGEPHISYPPLHERALREGEE", "length": 314 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43357-1", "protein_name": "Melanoma-associated antigen 3", "gene_name": "MAGEA3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQEAASSSSTLVEVTLGEVPAAESPDPPQSPQGASSLPTTMNYPLWSQSYEDSSNQEEEGPSTFPDLESEFQAALSRKVAELVHFLLLKYRAREPVTKAEMLGSVVGNWQYFFPVIFSKASSSLQLVFGIELMEVDPIGHLYIFATCLGLSYDGLLGDNQIMPKAGLLIIVLAIIAREGDCAPEEKIWEELSVLEVFEGREDSILGDPKKLLTQHFVQENYLEYRQVPGSDPACYEFLWGPRALVETSYVKVLHHMVKISGGPHISYPPLHEWVLREGEE", "length": 314 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43537-1", "protein_name": "Uncharacterized membrane protein YFL067W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MESIILSIAIFIGVLLGTSVGAGSGSSISPDVDAGSGSRTSPDVDAGSGSRISAGVGTFSGSSTSPDVDAGSGSSTSPDVGAGSGSSISAGVGSRIGTGIGSRIGTGIGTGIGSRISTSIGSRISPDVGTSSGNRISTGVSTGISTTMNARVAVLITAAILSAPVTAIALLEARR", "length": 175 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P46162-1", "protein_name": "Beta-defensin 4", "gene_name": "DEFB4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLAVLFLVLSAGSGFTQRVRNPQSCRWNMGVCIPFLCRVGMRQIGTCFGPRVPCCRR", "length": 63 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P46169-1", "protein_name": "Beta-defensin 11", "gene_name": "DEFB11", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLALLFLVLSAGSGISGPLSCRRNGGVCIPIRCPGPMRQIGTCFGRPVKCCRSW", "length": 60 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P47102-1", "protein_name": "ARF guanine-nucleotide exchange factor 1", "gene_name": "GEA1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MHDVPMETVLAVNPATMIVKECINLCSAMNKQSRDKSQTSVAALLGGGSDIFLSQSDSFVDSFHNLPTSSYHDPLISGLVQLRLKINDLKGLDSLNALELLKPFLEIVSASSVSGYTTSLALDSLQKVFTLKIINKTFNDIQIAVRETVVALTHCRFEASKQISDDSVLLKVVTLLRDIITSSFGDYLSDTIIYDVLQTTLSLACNTQRSEVLRKTAEVTIAGITVKLFTKLKLLDPPTKTEKYINDESYTDNNLKDDIIGTTTSDNDLSSTDDDSAVADDNKNEKPVQQVIREQENDEETAEKAENVEPNYGITVIKDYLGLLLSLVMPENRMKHTTSAMKLSLQLINAAIEISGDKFPLYPRLFSLISDPIFKSVLFIIQSSTQYSLLQATLQLFTSLVVILGDYLPMQIELTLRRIFEILEDTTISGDVSKQKPPAIRELIIEQLSILWIHSPAFFLQLFVNFDCNLDRSDLSIDFIKELTKFSLPAAAVNTSNNIPPICLEGVLSLIENIYNDLQRFDRAEFVKNQKEIDILKQRDRKTEFILCVETFNEKAKKGIQMLIEKGFIDSDSNRDIASFLFLNNGRLNKKTIGLLLCDPKKTSLLKEFIDLFDFKGLRVDEAIRILLTKFRLPGESQQIERIVEAFSSKYSADQSNDKVELEDKKAGKNGSESMTEDDIIHVQPDADSVFVLSYSIIMLNTDSHNPQVKDHMTFDDYSNNLRGCYNGKDFPRWYLHKIYTSIKVKEIVMPEEHHGNERWFEDAWNNLISSTSVMTEMQRDFTNPISKLAQIDILQYEKAIFSNVRDIILKTLFKIFTVASSDQISLRILDAISKCTFINYYFSFDQSYNDTVLHLGEMTTLAQSSAKAVELDVDSIPLVEIFVEDTGSKISVSNQSIRLGQNFKAQLCTVLYFQIIKEISDPSIVSTRLWNQIVQLILKLFENLLMEPNLPFFTNFHSLLKLPELPLPDPDISIRKAKMSRSLLSTFASYLKGDEEPSEEDIDFSIKAFECVKASHPLSSVFENNQLVSPKMIETLLSSLVIEKTSENSPYFEQELLFLLEISIILISEASYGQEFGALIADHMINISNLDGLSKEAIARLASYKMFLVSRFDNPRDILSDLIEHDFLVKNEIFNTKYYESEWGKQVINDLFTHLNDVKYNERALKNVKFWNFLRILISAKDRQFAVYTFLEKYIQNGDIFVDDGNFMNILSLLDEMSCAGAVGTKWEQNYENSVEDGCEAPESNPYRSIIDLSSRSINITADLLSTVGRSNSALNKNEIIAAIQGLAHQCLNPCDELGMQALQALENILLSRASQLRTEKVAVDNLLETGLLPIFELDEIQDVKMKRITSILSVLSKIFLGQLVEGVTSNETFLRVLNVFNKYVDDPTVERQLQELIISKREIEKE", "length": 1408 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P53563-1", "protein_name": "Bcl-2-like protein 1", "gene_name": "Bcl2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEPERETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK", "length": 233 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P56840-1", "protein_name": "Protein TCL1B1", "gene_name": "Tcl1b1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAAFDPLGPLPVYLVSVRLGIYEDEHHRVWIVANVETSHSSHGNRRRTHVTVHLWKLIPQQVIPFNPLNYDFLPTTWKLESRNIYWATDGTHWRLLDHSQLGDTEQLILMLVLG", "length": 116 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56841-1", "protein_name": "Protein TCL1B2", "gene_name": "Tcl1b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAGFYPPRLLPQVLISTGPGFYEDEHHRLWMVAKLETCSHSPYCNKIETCVTVHLWQMTRYPQEPAPYNPMNYNFLPMTWRLASMNTYRGTDAMHWRLLNHSQVGDTVQLILMLE", "length": 117 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56842-1", "protein_name": "Protein TCL1B3", "gene_name": "Tcl1b3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVHFPWMPFPPRFLVCTRDDIYEDENGRQWVVAKVETSRSPYGSRIETCITVHLQHMTTIPQEPTPQQPINNNSLPTMWRLESMNTYTGTDGTYWRLLDHSQMGDTLQLILDIVICEVD", "length": 122 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56844-1", "protein_name": "Protein TCL1B4", "gene_name": "Tcl1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVRFPCMPFPPCFLVCTRDDIYEDEHGRQWVAAKVETSSHSPYCSKIETCVTVHLWQMTTLFQEPSPDSLKTFNFLPRTWRLESRNTYRGADAMHWRLVNHSQFYGTEELVLMLDSR", "length": 120 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P59528-1", "protein_name": "Taste receptor type 2 member 123", "gene_name": "Tas2r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSQKINYSHLFTFSITLYVEIVTGILGHGFIALVNIMDWVKRRRISSVDQILTALALTRFIYVLSMLICILLFMLCPHLPRRSEMLSAMGIFWVVNSHFSIWLTTCLGVFYFLKIANFSNSFFLYLKWRVKKVILIIILASLIFLTLHILSLGIYDQFSIAAYVGNMSYSLTDLTQFSSTFLFSNSSNVFLITNSSHVFLPINSLFMLIPFTVSLVAFLMLIFSLWKHHKKMQVNAKQPRDVSTMAHIKALQTVFSFLLLYAIYLLFLIIGILNLGLMEKIVILIFDHISGAVFPISHSFVLILGNSKLRQASLSVLPCLRCQSKDMDTMGL", "length": 333 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P61314-1", "protein_name": "Large ribosomal subunit protein eL15", "gene_name": "Rpl15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR", "length": 204 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62246-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "Rps15a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62425-1", "protein_name": "Large ribosomal subunit protein eL8", "gene_name": "Rpl7a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62802-1", "protein_name": "Histone H4", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P62963-1", "protein_name": "Profilin-1", "gene_name": "Pfn1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGWNAYIDSLMADGTCQDAAIVGYKDSPSVWAAVPGKTFVSITPAEVGVLVGKDRSSFFVNGLTLGGQKCSVIRDSLLQDGEFTMDLRTKSTGGAPTFNVTVTMTAKTLVLLMGKEGVHGGLINKKCYEMASHLRRSQY", "length": 140 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62982-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "Rps27a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMGSHFDRHYCGKCCLTYCFNKPEDK", "length": 156 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P70709-1", "protein_name": "Eosinophil cationic protein", "gene_name": "Rnase3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGLKLLESRLCLLLSLGLVLMLASCQPPTPSQWFEIQHIYNRAYPRCNDAMRHRNRFTGHCKDINTFLHTSFASVVGVCGNRNIPCGNRTYRNCHNSRYRVSITFCNLTTPARIYTQCRYQTTRSRKFYTVGCDPRTPRDSPMYPVVPVHLDRIF", "length": 155 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P81278-1", "protein_name": "Prolactin-releasing peptide", "gene_name": "Prlh", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALKTWLLCLLLLSLVLPGASSRAHQHSMETRTPDINPAWYTGRGIRPVGRFGRRRATPRDVTGLGQLSCLPLDGRTKFSQRG", "length": 83 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83883-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "Rpl36a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83884-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "RPL36A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P97876-1", "protein_name": "Basic leucine zipper transcriptional factor ATF-like 3", "gene_name": "Batf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQGPPAGGVLQSSVAAPGNQPQSPKDDDRKVRRREKNRVAAQRSRKKQTQKSDKLHEEHESLEQENSVLRREIAKLKEELRHLTEALKEHEKMCPLLLCPMNFVQLRPDPVASWSAHDAPDHPSFIWLGTLV", "length": 133 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q00729-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2bc1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEVSAKGTTISKKGFKKAVTKTQKKEGRKRKRCRKESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVTDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK", "length": 127 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q01534-1", "protein_name": "Testis-specific Y-encoded protein 1", "gene_name": "TSPY1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESAPEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVGEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS", "length": 308 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q03764-1", "protein_name": "Ethanolamine kinase", "gene_name": "EKI1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MYTNYSLTSSDAMPRTYLVGTASPEMSKKKRQSANCDKPTRRVIHIIDTNEHSEVDLKNELPITCTNEDGEMTSSSWTSQTANDFLKLAYVNAKLDPSLPSQYFKQDIINVLQSLEIPGWSVPGSKESSLNKNLLTLTQIKGALTNVIYKIHYPNLPPLLMRIFGDSIDSVIDREYELKVIARLSFYDLGPKLEGFFENGRFEKYIEGSRTSTQADFIDRDTSIKIAKKLKELHCTVPLTHKEITDQPSCWTTFDQWIKLIDSHKEWVSNNVNISENLRCSSWNFFLKSFKNYKRWLYNDSAFTSKLLREDDKDSMINSGLKMVFCHNDLQHGNLLFKSKGKDDISVGDLTIIDFEYAGPNPVVFDLSNHLNEWMQDYNDVQSFKSHIDKYPKEEDILVFAQSYINHMNENHVKIASQEVRILYNLIIEWRPCTQLFWCLWALLQSGRLPQRPLIEGEKLMSEKAGLGDETHLMEHKNKENGKYDCSEDDSFNYLGFCKEKMSVFWGDLITLGVIDKDCPDIGKTDYLDTKLIF", "length": 534 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q04902-1", "protein_name": "Probable glutathione-independent glyoxalase SNO4", "gene_name": "SNO4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGFGWDEHYLPKSFIGGEDKMNFETKNSAFNKALARIKTANEVNASDYKIFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGLIDIKTTRPLIEGKAITGFPLEGEIALGVDDILRSRKLTTVERVANKNRAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINALYS", "length": 237 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q0D2J5-1", "protein_name": "Zinc finger protein 763", "gene_name": "ZNF763", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDPVACEDVAVNFTQEEWALLDISQRKLYREVMLETFRNLTSIGKKWKDQNIEYEYQNPRRNFRSLIEGNVNEIKEDSHCGETFTQVPDDRLNFQEKKASPEAKSCDNFVCGEVGIGNSSFNMNIRGDIGHKAYEYQDYAPKPYKCQQPKKAFRYHPSFRTQERNHTGEKPYACKECGKTFISHSGIRRRMVMHSGDGPYKCKFCGKAVHCLRLYLIHERTHTGEKPYECKQCVKSFSYSATHRIHERTHTGEKPYECQQCGKAFHSSSSFQAHKRTHTGGKPYECKQCGKSFSWCHSFQIHERTHTGEKPCECSKCNKAFRSYRSYLRHKRSHTGEKPYQCKECRKAFTYPSSLRRHERTHSAKKPYECKQCGKALSYKFSNTPKNALWRKTL", "length": 394 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q0WX57-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 24", "gene_name": "USP17L30", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLRGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q1LYG5-1", "protein_name": "Elongation factor 2a.1", "gene_name": "eef2a.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MENFNVDQIRATMDKKSNIRNMSVIGAFDHGKSTLTDWLVSEAGIVSSARAGETRFMDTRRDEQERCITIKSTAISIFYELAEKDLAFIKECKDGSGFLLNLIDSPGHVDFSSEVTAALRITDGALLVVDCVSGVCLQTETVLRQAIGERIKPVLMINKMDRALLELQLVPEELYQIFQRIVEKVNVTISTYAEDEKGPMGNVMIDPVIGNLAFGSGLHGWAFTLKQFAELYVKKFAGKAQLGPEEYIKKVEDMIKRLWGDSYFDSTTGKFSESATSPDGKKLPRTFVHLVLDPIFKVFDAIMNFKKEETVKLIEKMGIKLDVEDKEKEGKILLKAVMRCWLPAGEALLQMITIHLPSPVTAQIYRCELLYEGPGDDEAAMGIKNCDPKAPLMMYISKMIPTSDKGCFYAFGRVFSGCVSTGLNVRIMGPNFTPGKKDDLYLKPIQRTVLMMGRYVEPIEDVPCGNIVGLLGVDQFLVKTGTITTFTKAYNMRVMKFSVSPVVRVSVEVMDPADLPKLVEGLKHLAKSDPMLQCIIEDTGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPFASYRETVSDGSKQLCLAKTPNKHSRLFMKACPLADGLAEDIDKGRVTASQEMNARAQYLAENYKWEVTEARKIWCFGPEGTGPNILVDLTKRVQYLNEIKDSVIAGFQWATREGVLCAENMRGIRFDIHDATLTSTAIHRGPGQIIVATRRVLYGCQLTAEPRLSEPIYLVEMQCPESVIGNVYGELVRRRGVVFSESQVMGTPVYLLKAYLPVSESFGFTADLCANTSGQAFSQCVFDHWQILPGDPMDPTSKVAHIMADIRKSKGLDEAIPALHCYLD", "length": 854 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q1PEY5-1", "protein_name": "Probable 3-hydroxyisobutyryl-CoA hydrolase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASHSQVLVEEKSSVRILTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQGRAFSAGGDIPPIVRDILQGKLIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSISLTALEAELYKVGSSNQTFISTILDAYAEYPHLNQHSSYHRLDVIDRCFSKRTVEEIFSALEREVTQKPNDWLLATIQALEKASPSCLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGDISKDFVEGCRAVLIDKDRNPKWQPRRLEDVTDSMVDQYFERVEDEEGWEDLKFPPRNNLPALAIAAKL", "length": 378 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1ZXA5-1", "protein_name": "ADP-ribosylation factor-like protein DDB_G0292332", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDFIISFIKNLFGFLTIKKVMILGVENVGKTTLLYNIYKFYSENITTTTLSSLPIPIPTNGFNVESIVIEQVKFDIWDIGGKETNRICYRHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQISLKNVPFLLVANKQDLKQQTIEIDEILKTYFDKSSINETILMSQNNNDDLIKCINWIFSN", "length": 186 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q1ZXJ4-1", "protein_name": "Acetyl-coenzyme A transporter 1", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLFTLLKRHFGNELNNIVWLVLLYLIQGIPIGLSFGTIPFLLHKHATYTQIGIFTISTYPYSLKLLWSPIVDSYFVQSFGRRKSWIVPIQILAGIVFITISFFIETLLEHAETKIIYITIVFFLLIFLMATQDIAVDAWALTILSKPYLHYASTCQTIGLNTGYFLSYTIFLTLSSPKFANKFLRSVPSEEGIITLPGYLQFWGILFIILSIYLAFFKDEESTTITTTTTRHDNYNNNNNDDKNKQVKSKIENESIESKSMRSSPSSLSPSLLSSPVKKQNKKNKQHISIDKKDITIIKENNENNEIIDNNNSNNNYDNGKKSIVQETYGMDISESDLTPKQVYYLLWKIITLPHIKILSILFIISKIVFQPNESALNLKLLEKGLRKEDIASFSLIQFPSIIIFSIISSKWVKNKPLTIWSNAYLVGVFFILVNMCSVFYFPNLNGGEISWSHFFLLLMISLFSSFSYNLMSVSQGSFFLKISDKSIGGTYVTLLNTIANFAGTYPKLFILMLIDKLTTSECIVNISNDNSSSSSSSSSLISTSSNNLTTTTTIIQEQQQQVIIHDNISKELCAEQNGKYRIERDGYYLVATGAIIYGVFIYFVLKRYLTPIEKLKL", "length": 618 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q23888-1", "protein_name": "Large ribosomal subunit protein uL2m", "gene_name": "mrpl2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVLNWRGVKSRLYSGKRRIDGRNKGLIAIRSRGGALKRKYRYIEHYKQKWMDKWLFVMRIEYDPNRSAHIALCSILKEGIYFYVISIAKLEVGSLIITSALKLGTLQVGNTTKIKNIPEGLLINNIELIENSGSKISRAAGTSSLIIKKYNKKYSLVKLSSKECRLISNECYATIGTVSNIERKLKQNKKASYSRKRGIRPIVRGLAMNPVDHPHGGRTKGGVHWKSFSGKLAYNVSSRKKTKMTSRYIIIGHRKQKIMDKQIKNG", "length": 266 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q24113-1", "protein_name": "Protein no-on-transient A", "gene_name": "nonA-l", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MEGAVKKNSLNSSPLPQRQQRGNSTNKNLGKPTPPKLNAASDGNPAEKKARLGGNTQNGGGVAGGGGTGGGGGGGGATGGVEFSRNRNRGGNQNENRQGFQVANNSHQKQINESPKPAAGNVPAKNNELSAGGGGQNQPNHSNKGQGNQGDQGEQGNQGPNFRGRGGGPNQPNQNANQEQSNGYPGNQGDNKGGQGQRGAGGGKHQRGNRSRRSGGSGIMNSSMGGGGQRGEDFFIAQRLLDISGPTHELPPIELPTDNKFVGRNRLYVGNLTSDTTDDDLREMFKPYGEIGDIFSNPEKNFTFLRLDYYQNAEKAKRALDGSLRKGRVLRVRFAPNAIVRVTNLNQFVSNELLHQSFEIFGPIERAVICVDDRGKHTGEGIVEFAKKSSASACLRLCNEKCFFLTASLRPCLVEPMEVNNDNDGLPDKTLNKKSLEFRHERSVGPRFACLNSFEHEYGSRWKQLHDLFKSKQDSLKRELKMEEDKLEAQMEYARYEQETELLRQELKKRELDNERMKLEWEMREKQAEEIRKREEEYMHRYQNQLLRHEEDMRARQQENDLLMQAKKLNMILDQQEGFGGSNSGFEHFDSPFEVFGNNSNNSTMAGPGGPDNSDGNQHGHIDSWGHRRF", "length": 630 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q2PRK7-1", "protein_name": "Odorant receptor 106-10", "gene_name": "or80a10", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANETFVKNVDSFIITGFDHLQNQKLLGSLILISYMFILLGNGINLCIISTDRHLHKPMYILICNLAVVDIMYSSTCSTTMISVLLAEIKTVSYYSCISRTYFFNLGDLTECMALTLMAIDRLIAINLPLRYHSFVTNSRILWLIFLTWIFSFAVIGFLTYVADTLPYCQPIIKYVFCSYSSLVRAACVDPEPYFAISTVYSMVTLCGLFPFILCTYAVLAYSVTKLANSSRKQMINTCLSHIIVLFSFYLPKIVYILLTRIGLVLTLTERNAVLIVSCFVSLLVNPTVYCIRTKGIRKRITDIFLYTQKITK", "length": 313 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2YDJ5-1", "protein_name": "Uncharacterized protein CXorf66 homolog", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIVIGTLITGYMVSCTCLLHYSCDSEEAHTAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKPVSQVSPSYPEKAIKSTWPPSLQCRAKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSRNN", "length": 361 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3L180-1", "protein_name": "Alpha-defensin 26", "gene_name": "Defa26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALFLLAFQVQADPIQNTDEETNTEVQPQEEDQAVSVSFGNPEGSDLQEESLRDLGCYCRKRGCTRRERINGTCRKGHLMYTLCCL", "length": 93 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3TR54-1", "protein_name": "Gasdermin-C4", "gene_name": "Gsdmc4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGYSFDRASKDVVKKLQGRDLRPVECLSDATKFRLFHILQETPRSGWETEDIPVGFTLLDLLEPNFPVPEPEVSAPKPFIHVQSTDLEANLNVADIARGGVGYVGYGGYNIEVQSTSIPNPKLEILQNRKLLDKLPTFMKFCRMERKNLYVVTEAYEVSKDTMLTGLSSVNLLVKGFFKQLFKVRGKAGRSEKYSIPIPKGSVLAYKKQQLVIENNTCVILPSATKKKMTFPDRPLKLYDLPVTLRYQEEVIETGSWIDDIDPIGTIEEPANLNFMCLQHEVSEQTQLLAELSKDVQEVVFSSFLHMLSDRDVLYDLMKMLELNQLGHMDGPGGKILDELRKDSSTPHDVLKDLNLYLLQALLVLSDTQLCLLAQSVKMGLLPHQVELVKSILQTNFKYSSNTPFTLQPQLLAPLQGEGLAITYELLEECGLKMELNNPRSTWDLEAKMPLSALYGSLSFLQQLQKANSSSKPSLSPGYI", "length": 480 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3U0I6-1", "protein_name": "Endoregulin", "gene_name": "Erln", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQMVPPRSIQNEDFWKNPWDVGGLTVIGLFTSTFLLFVLFAVVFGYVEKAVFEEE", "length": 56 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3URS2-1", "protein_name": "Zinc finger and SCAN domain containing protein 4F", "gene_name": "Zscan4f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIMQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3ZCQ0-1", "protein_name": "Required for drug-induced death protein 1", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVGARLRSKASSLVGRGPLGRLRRAGDEETDAIVEHLEGEDEDPESQDCEREEDGRRAGTPSARRVHLAALPERYDSLEEPAPGDKPKKRYRRKLKKYGKNVGKAISKGCRYIVIGLQGFAAAYSAPFGVATSVVSFVR", "length": 140 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI3-1", "protein_name": "Defensin alpha 3", "gene_name": "Defa3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGTLTLLTTLLLLALHTQAESPQGCTEDQKLLIMEDQDISISFTGDKGTALQDADVKSGVICNCRPRGCSFKERVYGECGYNGHILRLCCQPLNTMNKKSPSVI", "length": 104 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI6-1", "protein_name": "Defensin alpha 8", "gene_name": "Defa8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKTLVLLSALVLLAFQVQADHIQEAEEETKTEEQPADEDQDMSVSFEGPEASALQNLEIGWPLKQCHCRKFCRPYEKAEGSCRPGLFIKRKICCIQQWTPGRT", "length": 103 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4KL71-1", "protein_name": "Small proline-rich protein 2A3", "gene_name": "Sprr2a3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q504N7-1", "protein_name": "Pyrin and HIN domain-containing protein 1-like", "gene_name": "Ifi214", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLTGLMGINDHDFRMVKSLLSKELKLNKMQDEYDRVKIADLMEDKFPKDAGVVQLIKLYKQIPGLGDIANKLKNEKAKAKRKGKGKRKTAAKRQRQEEPSTSQPMSTTNEDAEPESGRSTPDTQVAQLSLPTASRRNQAIQISPTIASSSGQTSSRSSETLQSIIQSPETPTRSSSRILDPPVSLGTAYSSAQALGVLLATPAKRQRLKNVPKEPSEENGYQQGSKKVMVLKVTEPFAYDMKGEKMFHATVATETEFFRVKVFDIVLKEKFIPNKVLTISNYVGCNGFINIYSASSVSEVNDGEPMNIPLSLRKSANRTPKINYLCSKRRGIFVNGVFTVCKKEERGYYICYEIGDDTGMMEVEVYGRLTNIACNPGDKLRLML", "length": 393 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q54B59-1", "protein_name": "O-methyltransferase 12", "gene_name": "omt12", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDWDKTMDLLFGFVTGHIHSRMFETILKFSICDLLEDGPKHYSEISKIIGFKNESYCYRLMRYFVPYKLFNESVVQVGLFSKTPSSTQFSKNGTLKNLGRFHCQDHHYRIFESLPKTLEMGKNQGPSSIGLSSFWEHFETDESYKQLFHNAMKDYTSLIIDRLISKISLSPNFKTVVDIGGSHGFLIGKLLESNPNIHGINFDLENIINSSTSKNENFQHPRLKHVSGDFFNSVPEADCYILKYILHDWSDEKCITILNNIHKSLKPNGKLFINDLVLDPSNYTKEAVFKDILMMQYFDAKERSINEWHQLFEKCGFKIDSVDTSISPQLMIVSKINSSNINLNDCTNFNSEIVEEKLKNSLPQFVNC", "length": 369 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B60-1", "protein_name": "Probable inactive O-methyltransferase 11", "gene_name": "omt11", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MECSESLELVDKFACGHILSRMFNVVMKHSICDLLEDGPKHYSEISKIIGFKDDSYCYRLMRYFVPRKLFKESVVQVGVFSKTPFSTEFSNNGTLKKLAKFHCNSFHYKLSQVLPETLEIGENQGPSSIGLSDYWEQIEKNEIYKNEFNDGMIGYTTHILKFLKGKIDLSKFETVVDIGGSHGYLIGSLLDRYPNVNGINFDTDMVINSSNEKYQHPRLKHVAGDFFKSVPEADCYLMKLILRCFSDEKCCELLKIISKSMKSNAKIIILDIILDSSKYLNFDTYLDILMMETLDGKQRSLSEWIKLFEMSGFKIDKYESGSPNYLIISKE", "length": 331 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B86-1", "protein_name": "Hly-III related family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPRLDHKKNKEEKDNEPLMMVNNYNIGIQTDNNQEDIQNDYHHFNDLSINIKNNKNNNNNNNKCNSLHHKHYHNRFIINGGNNNNDNNNNNNGDDCCANIELFVDLMLSENEYILSGFRLHTKNSYMECTKSIFKLHNDTLNIWSHLLGALFYLVLFFTSIIKIIKLNNNDGGGGGGIGNNFILNSDEIKLLETIDLPSNFNYLFFQLSCFICFLSSTIYHTYRSHSIVVFKTTLMLDVASIALLILSSVCLIIDSELSCWPYFKRIYLFSFLILILISFLSLPKIMREKRYGLRTFLFAILALQGLVGHLFKIYLQGYFDKDPNQFYNLIGAYTLFGLALSIRRFKVPESFKPGHFDVWVNITFNIVYNII", "length": 372 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54BG8-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGKIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54C66-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKTKKYKNPFPTNSYKEPENDSDNEYILHNEEDNEDYGSNNNNINNDGFSYEDNIENSDTEDEREDYGYINYNTNNEEDDEPIDLSTPIKKKKANNKSFKPPYKNTTTTTTTTTTTPPTPPPSKSNNNNNNNNNNNNNNNNNKNKENINKESEYELNKFLDLYNDFKSESDNKVKPTATTTTTTTTTTSTSTSKLNKDKKGVIVIESDEEKEDNTIKINKRNGKRKEGEQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQGNEDNLKSENFNKFKKLKSFSNQPTPLPPMLSNPFLNNSGNSHNNNNNRILFNSQFTNASNLNNNINNNINNNINNNINNNINNNINNRNNNTNNYTNNNNNNNNNNNNTNNNNSNNNINNNNYNNNNNNSFSFLPIRSNTLPTIVTRRTGIQSSSSDNGNSNSNHSSSMNKRNTSKSNNKKSTTTTKTVLPPPLSSRTQEEEDYALALSISEGLNGGSGGGSGSGSGSSDNSTKTKRSKSENDLPNEETRHQVEMDRRFAEQLHREQHENINQIQQLQRRLHLNQQRTNNINRNHHGDEDEEDIEMLNLRAYQQIQQQFNQHFNQQLNQLANHPLANLFSHASRGRGRGARRIPHHPHHHHHPHQAQYLTGLSQEQLNLMTRDFSSNDYELLLQLDENINNKGATTSDIENLPVHTLNKPTATTTSTTTTTNSSTSDDNKKNEPTTDVTCCICLCEMEPGDAVRTLPCKHFFHVSCIDQWLKVNKVCPIDKKAIDEK", "length": 766 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54CY8-1", "protein_name": "Obg-like ATPase homolog", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKGIKLFNNFTNTKQILFFRSFSTAAKGDRLKASHYVKTRGSCKSISIVGLPNIGKSTFFNALTSSNAAMAANFPFCTIDPNIGKVFVPDERLDYISDLLKTKSKIGVQLEFVDVAGLIKGAADGEGLGNKFLGNIRQTSLICHLVRCFEDKGITHVSDEIDPIRDIETIETELILADLQSLEKMLTEGKKKQSNPELQMKFDLVKRISEYLHKGLPARDVEITDMEWPVFHSLHLLTSKPTIYTCNVAEGDAATGNKYTDLVKEYSKSKGLEIEPVVISAKIESELANMEGNDETKKEFLQLYGLENNGLSKVINGAYKLLGLQSYYTASSNECHAWTFKAGWTAPKAAGVIHSDFEKGFIKCDTISYNDFIECKGDEKIAKEKGKQRSEGKAYIVNDGDILFFKFN", "length": 409 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54D44-1", "protein_name": "Probable polyketide synthase 42", "gene_name": "pks42", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIESQREFNCIGGDNQNGVAVIGVGFKIPLDLENCLSSPSELYSALFNEFDSVTKNTSSRWSDNYFKNGDIVSLSAGLLPLREIKSFDPTFFGINPSDADLIDPQQRLLLKCVWNALEDGGIDPISIRSSDTSVYIGCSTIDYFLLNRNPVDPHNHGIQTASYSIPNRISYCFDFRGESLFVDTACSSSLNAVHLGYNSIINLKSKLSIVGGSNLILDPQNSIFFSKQQVNGPSGKCNSFSEEADGFVRSETVGVVVLKNLKDAIKDGDRIYCVIQGSNSNVDGNYEKLNYISPSKLSQAENITKALKSTNGAVNASDIDYFECHGTGTPTGDPIELEGISIALNRTQQSTTLSNPLLIGSIKSNIGHGEASSGIASLIKCCVMFKYRQFLPNINFKTPNPLIKFKEWNLKVVTEPVPFNNNKQTIMAINNFGVSGSNCCIILSEYKSNNNNNNDFKATTHLKSKKFIIPFSSNSSTSLDNYKSLLSNETNNFQDFVIKQINNKSTSLIQRSVIIASNWSEFNESSNEIQSNIKKSIISNITIKKKNAVTVFVFCGQGSQYNKMALSLYENEHIFKSTMDKLDKELSKHYGYSILEKLRSITDEDLVTIHQPILAIPVNVMVQVSLYELYKHWGIKSDIMVGHSFGEIACSYCSGMVDFKTLCYLTYHRSVAQNKTIGSGKMLSINIGAKEYLDSYSTKYPSVEIACYNSETSIVIAGNEELLNEISKDLKSKDIFTAMLPSLSAFHTTHQSVIKDDICSLNFKSTLSKITVFSTVTSNQFGINNNNNNNNNQLNSNYLFQNVIQPVKFSETISNIYKYIESNDMGNEITFIEIAPHPTLQYYLNQMKSQQSEYFNNGEKISIYSACNKKKNDYNEFLKTISTLFVNGYNNINFKSQIINNNNNDNNNNFNLPLYQWDDNEYYKIHPTWKKANKNGPSINHLGNLNDSSIKSFKTYINTRKPQFQWLKGHSLKGKVVFPGMGYISNLLSVYNMNQDITINEIQFKSAFILVDGVNNCLETSIVPLTKNEFNIKFHFKDLKTNKWVLCANANYSLFKHNDNNDKLDIEKLKSNCNYTIISKDELYNNIRAKSGLIYKGLFQGVKEAFIGNRCSLTVLSLNEIENQQEFKHLLENRNFNSLFNTAILDSCLHGSLHSKEQSQIYFDKCEGFKYYSNNINLATSKRNEYKEINVYIETNPVINSTVIVSLKIMLPDGTLLIEIQKVVCKSSIPIIDSTSVIQPSPKDLHTPYYQPKNSLIKPPQSFKHLHCMKEFASIESDNREMVYMSIYHLIFKAINARSPTKINLESLENLTLDQFKELIKDSAANIQRSNQFIYECLKLYHTNHSNYKKNQIKDFIKECEDFNGYNQIIFKTIKIYAKSLFPLPDDDPFTDTIQSLFEDDQLENVYIHLKHLYPVNNLLSEIVFQSIKPIINQTSTFRILEIGAGYGTISQLIFDKLEQLLADNFTSSRIDIEYTFTDISNTFLPRAKERYSKYKRFNIIYKLLDLELPLTEGIQDFRPLYYDIVVMSNVLHVVKDINFSTNEIYKVLKQNGQLIFVEPTYKNLYLDTIFGIFPQWWSFNDDIRTDRCCLEPSKWFEFLETINFKDTIILGQDNKEILKNVENSIILVQTRKPSQLELSINNSPSTNQFKSFENIILYTDDNQQPNDCSEIIDLLKSLELPIKIINNIDQFNQIIKTQYNNNNNNNNNNNNNNNNNNNNTNNNLIIFLKSVNQLNTNNYKDITFEYVQINQILVKLELEENYKLLLITNNSQSSNYLSNSLIGTSRYLFADIVSSKLDIITIDFDTVSIKNHQNVISVINHLLDSKDNSEREYYIINNEINIERYKNESNIKHQLKSKTFQENKDELMVQLDSNLEYRLKSKSKQELKSTHVEIQVKAIGINYKDYATYSGLIDSIIEIDKDKEKDENYDQNYPSIGNDFSGVITRIGSDVRKFKVGDEVCGLAPKTSASHIITEEGYLCKKPSNISHSEAASSVTVYTTSFQSIYSIGDLKKNETILIHSGSGGIGLSALEILKWKNHQGYIFATVGSEDKVKYLTDTYGSFITGIYSSRDKDYQDQIKEKLKSLGCDIDHQGVDLILNTLSVEYMDSNFKCLNQKGRCIDLSITHLTPFDYMDYNKFKFNVSYGNIELVVLPSKIIKDHLKKMLKAFSLGSLRFIPIVEFSNLNIRNAVEYINQRKHIGKIVVKNDVDFINKLFIEQQQQQNSVENNEILMKDKYDISNLELGKNILLTGQTGIILTILKWLYKHSNNSIENIIIISKSKLKWELELFINESTNNRIKIHYKQADVGNNNELNQCFEELRLRHSIEDINSIFHFAFINDIGQFEDVNMNRMDIAHHAKAIGSLNLHNQSIERKWNIKQFVLASSALSVFGGDNQCCYISACSVLDSLSKYRKSIGLPSLSINFGGVTSTGFVSRSGAVEANLESSIINLITPQSLISSLDLFIQNSQTFSNYTHFNFIYDNIESYSLNRMLFKFDYLINQHSSLVSNKRLGGINENNNIGDLLVSKIGELLSIEPSKLNLDFRLVDYGLDSLVIVQLKNFIDKQFQPHLISILQLQNNKISTTIEIIIKGYNNNQNKKIKNEQSNDIPSVVQKETIKDNNENKDDIKIDMDDKKENLKGKKENIDDKKENNN", "length": 2655 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54E06-1", "protein_name": "Transmembrane protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTIINNDNISLATSAKLSQFIVSGDYKGPFTIIGLKTKILSFSLVIEFILLKIELIKERKDGLKINFDDSISGSCNYELNYTKQDTLFQRFQSKFKIEHTINPENGETINTGITLKKLFIISIPMSILFVALNWIWMLAISMTEVSISTALYLKILKTISVIIFMGGIVGIAITTVGTSKGEYPHAIKGEILMIISAAMWGLYEVLTSKFIGDANRTIVHTYMGLIAFVNLILGIPVIVILNVTNFEPFSVPSISVFGMLLLNAFVGFSVNYLINWGLSVTSPLFVRSGELMVIVATLLFDIIIKHMKLPLLALPGYSLIVIGFILSVYIESRDIKQQQEKEKEKQKNNNGETESLLNY", "length": 359 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EC9-1", "protein_name": "DUF781 family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKIILIFFLINNIFSIVVSSTKLNPWVFEERIKLYDILINSTKVEIFGDDNLNNCFQGFKIQLEWQKTTGRSMIIDNSNISVNSWWGSMNYYESIIPFISAMNLGIIQPPIELVNIGDDRFCTDYSECDKELMEPWDLYFQFLIKIKDEKYSYSIQQQILKYNWDGHMKSLSIGLKLFNDKLNYLSKNEIKFSTGFVHFVDIISLINFNTNYSQILPIFDSLPPRMLTNSDHPPFFKGFTRTQNFYTVSVLSINELHENQILWNYFLNLLKTKTENEKCRDFINQEIINFTKYPESTLVKLLLKLLLNNC", "length": 312 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED6-1", "protein_name": "Probable polyketide synthase 41", "gene_name": "pks41", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDSKNLVDENCNKVAIIGIGFRFPNLKGDITPNELWSKLLNRYDGIVKNDRWNESFFKSGDISTNYAGFIPFEELKSFDPLFFGINPSEGIHMCPQQRLLLKCTWEALEDSGIDPIEIRGSNTSVFIGCSGADYQNLNKNDNKVQQEIFSSSTHSISNRVSYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNISKSYSRLNILSKDGKCKSFDAGADGYVRSDAAGIAILKNLNDAIKDDNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGQVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSDNPLLIGSFKPNIGHTESASGISSLIKCCLILKNQCFVPNLNFNKPNPLIKFDQWNLKVVTDPIDFSTLNYINKRVSIAINNFGVTGSNCCLIVSSFKGNQIRNNINNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVVIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNVTMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLNEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKKDGVFCAILGSPTSFHTSSQLSVKDEILKISFKSKQPTIPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEVIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSDHNNTNNQTRVNLPLYQWEDQEYWKLDNLHQYHLSNGPSINHLGISNSNHTPIKSYQTHINIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGESKTDTNPNKELPDILISFIEFKTPLIFMDGISQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGPNLNEDDEQSLFMYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVDKCYLGYNCSLSEISIIQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEELTYYSSKVPKTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDPLAMEYPTNEIYSCNLQSKDSLIPSLSSFDHIFKRKIPNEYVDQINIYESFIPKLLFSNINKRCPEITIDEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRFNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIIGDGIFGVFDQWWSFQDTEIRKDRCCMKQKTWYKLLKSVNFNDDIRMTPELTCFVIQAQKPSISNLSFSKSETTNYDSIIVFGNKYASNLSNHFIKSIDNGNLQFISTIEELNKIGKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNCKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITRISTGSKEFKVGDHVYGIGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITHYSIEKVKESIEFINERVHMGKIIINHENQDSIINELIEKQKSINKFDQSIFKQNYKLEPSLLGRNILLTGQSGIVLEILKWILRNSENNSIGNIIILSKSSIKWEMEYLINKVKLINKLGNFFNNIKFHFKSVDISDSGLIDESINKLLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKLKNFIMSSSVSSKTSTANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIESTGFVSRNESVAALLSGEGFIPISANLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISEILSTDILKLNKDIILVDYGIDSLVIIQLKNWVDKEFSIPNELTIQKIQNSTINSFIQLVKNSMDKNKK", "length": 2542 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED7-1", "protein_name": "Probable polyketide synthase 40", "gene_name": "pks40", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDYKNKYQSNENCNKVAIIGIGFRFPNLKGDLTPNGLWSQLLNKYDGIVKNDRWNESFYKTGDIPTKYAGLIPFEELKSFDPLFFGINPSEVIHMCPQQRILLKCTWEALEDSGIDPIEIRDSNTSVFLGCSNFDYQNLNKNNNKIQQNIFASSSHSVSNRISYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNTSKSYSQLNMLGKDGKCKTFDADADGYVRSESAGIAILKNLNDAIKDGNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGGVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSNNPLLIGSFKPNIGHSECASGISSLIKCCLILKNQCFVPNINYNKPNPNIKFNQWNLKVVTDPIDFSTLKLSNKPISIAINNFGVTGSNCCLIVSSFKGNQTNNNNNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVAIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNATMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLSEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKQDGVFCTILGSPTSFHTSSQIPVKDEILKISFKSKQSTYPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEIIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSNLNENDNIQTSLSLPLYQWEEQEYWKLDSLYQHHLSNGPSINHLGISNSNHTPYIKSYQTHIDIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGDNSESTTNPNKELPDILISFIEFKTPLIFMDGVNQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGQGLNEDDEESLFKYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVEKCYFGNNCSLSELSLSQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEGLTYYSSKVPTTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDSLAMEYPTNEIYSCYLQSKDSLIPSLSSFDHIFKRKITDEYVDQIKIYESFIPKLLFSNINKRCPEITIAEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRVNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIVGDGIFGVFDQWWSFQDTEIRKDRCCMNQQTWYKLLKSVNFNDDIKMTPELTCFVIQAQKPSISNLSFSKSETTNYNNIIVFGNKDDSNLSNNFIKSIDNGNLQFISTIEEFNKMTKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNSKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITNIGSGNKEFKVGDSVYGTGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITEYSIENVKDSIEFINERVHMGKIVVDHENQDSIINELIEKQKSIDKFDQSIFKQNYKLEPSLLGKNILITGQSGIVLEILKWILRNSENNSIDNIIILSKSSIKWEMELLINKTKLLNSNSINSMGNYLNKIKFHFKSVDISDSGLTDKGIHELLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKIINFIMSSSITSKTSSANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIQSTGFVSRNESVAALLSGEGLLPISTNLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISELLSTDILKLNKDIILVDYGVDSLVIIQLKNWVDKEFSIPNALTIQQVQNSTINSFIQLVKNSIDKKNKK", "length": 2552 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EN3-1", "protein_name": "Alkyl transferase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNCSNNSENCNINDNKKKEENVKNQNSNKNSNNNNNKSNIESIILNKKSKFSSEKELDEKENKDLKDLSNNKPINIDEYEGLPRFENEQNARSKSSLWSKLCDWMYDQNFKIASSTLKNGPIPKHIGVIMDGNRRFAERNHLETKEGHKKGFNTMLDLCQWGLTLGVKIISVYAFSIENFKRSKSEVQDLMELANNKFTEMISKSHKLQQLGVRIRVVGDHSHIPEKTKSILAKAVKSTENNTKALLNICLSYTSHEEILHSMKILSKGVNQEKKIEIEDIDQDLFENCLYIKEDLDILIRTSGEYRLSDFMLWQSCFTNLALVNTLWPDFSFFHFIYIIFLYQFNSKTLKNEIQNQYKFNNNNNNNTDNNNNLKENIKNLKSDQRVKEFINHLKISEEKLFDEFISKYNEEEEEEEEI", "length": 420 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54F52-1", "protein_name": "Saposin B domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLIFIVCLLLIFNYFIGISFGNKQINSNQQQQIINTDKNYNHNKNNKIIVSHNKNNNNNNNYNEIETENLGCTFCKYLTEKVEEYLQANSTEKEIISYLDEECELLNSPNLVLTCQNLVQQYTPIVIELIDNNESPSVICENVNICPTSSSSSSSSSIEEEIIKKLNIDDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEEEEVNTCEICNLVSNLIEKYIKINNEVDEIRELIENECELLSNSKVSSCYSLVDQYFEHFYVTIENNYSANEICQLFQFCPIESSSSSSSSDIINNIPLQDSGCTVCTVLANYAYKVQANESIPEIIGSMDEICNKIGAWRDICNSIMRSGGQQLVEDIVNKGEGVYTACSNIGYCQSSSSATGTSGFSSGGSGTSTGGGYSTGDFYYKPLK", "length": 416 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54GT5-1", "protein_name": "Endoplasmic reticulum junction formation protein lunapark", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLFSKKNGFEKQLLDMETKILNLEDKLSNSRIFHQKVLHKIVLYSFAIEFFIILFTYVKSRSLESIPEKLFCCIYLVLFPIFILILTKVYGFVYKYLIKKNEVRLDSLKTGLQKKLDERKRETDYENTQKLLDRYEKNPPSPTNKPLGPPNLNNNNNNNNNNNNNNNNNNNNNNNNTLGNSMRNRNQPFNISSQQNQQQQRMIQPQQLSPQQLQLLQQQQRLSQQIVPSQQQQSQSQPQQQQPILNQPYNINNNNNNNKPPPPIQLPPQQSSQYIGNQQRLPPQQYQNEQKSKWWLDKLVDYLISDGPTHGSPLICSNCHSHNGYVPVEELSNIQFRCRVCKTFNQRDSVNNSTTNDDRNNSQNTGSNQQQSQSLQDQQPSIEEIDKNFSVTEQKNETNNENYSDSEKQLEENNNNNNIDNDSGSSSSQNTPNKKKGKGKGKGTPTKKTN", "length": 452 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H60-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLDFFHLKDVDEFFRLLEKKNLQNLDNQIDGPGNLNWRTTYTEKDFSKVPKFRGIIHIVQIRDLGTKIHRDLLYEIMFEKLLDIARLNNESKLLKNEIQDLKTKLDEYHNNNSTTNTDLIINSFINVIDTTTTTTTTKTTMGATSIDKKQSEGDSIDKSIELDFFKIKSDQSQQSSPSHKLEEKQNQVNNITNEIPQESIKTVKQQTQTETNQQTFSSTSPSHQNEEKQDKQEEVKQEEVKQKEGIQKEDKKEEDKKEEGKQKYGEIFIIEIPQEEEKQKEEGKQQDGENFIIEIPQEEDKQKEDKKEEDKKEDKQEEDKQKEEKLEDKQKNGEEFIIEIPQNETLEIKVDTHPRSSNDDVSTAEMEVEALKTPLFAETTFVTKQQVITNKKLLVYKQSDFFPNMTTLLQSRLKDVTVQEVKDLTKIGLNDNSYSVGDFENVFVLYAVSCMGARTDSERDAFKIKSIRSIIGDKVPIIYGVFMIGKNGPTRIKVEHTQTSISITHSMSDIGRNLQNNENLKQLQSFLQQ", "length": 529 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H72-1", "protein_name": "Tudor domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNIDFEDYEFYDDSDFEINTVDESVMTYSSVFDFLRFGKIPKFDTQTKMKHFKDNISKYRIESKDILHTNVDSKILRRLSEIPRVEKIFPDPNTLQLEVFKPNHELRNSNGELLSKHRPLQETLKLIEKQYYWECKFIHTSMEVDITKLYSFCDLCSQSSVSRDMDIDSNDEDKILEQMDIVEKSFSNDRNNNNNNDDNNKSIDEKDKMNICGIGIDLEAIKEGKLFEDELAEALGFPEYNSSVDNSFNSSVNNSNLNNSSLNNSLNNSKNNNNNDDDNNNNNNNNNDDNNNNNNNNNNNNNIISNIDNNNNNNNNNNNISNIDNSNNNNNNNNNNNNPVNDDFSFIIPKDYQSKNHLNDNENKDDEKDDDKDDDKDDDKDDKDDDKDDDKDDDKDDSKDNGYIKTNVSLSSSSSSDNERDDGDSHSDKSVDNDENNNNNINNIISDCNNNNNNNNNNNKINGRTFTSRRTRSDSNTSNSSVGSYISNSSKSSANSYDFSSSDQDYKSPNSPTVKKTRGASLVNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNSILKPKLKSKRASASTAINSFISQFITPKHPPKSSSRLKRANRSNDSSDSGDSSSNNSSRSSSDSSDNENNNSYYLPIQSRRSTSKQILKDHLKSPTKKPRRIIEEDFYHVEEKKSPTSKISTPISRSASYNFGRSSPGSSPGSSPSLSPYSSPPQSPPHVYNHNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNYNNNNNNNNNIRSILKSPQSPSISPIKTPRRSPQQQQQLQLQLQNYIPMPTKTKTPTKAPYVPNYALAPIEPKPTQKTPVHVFGGNQLSVKKRQTIEDMITEVLKMNVDTAALKLPLPKVGQHVEGKSNMEDYKDAWFKGVVKEVLPNDFFLISYIDGGEEELSYTRLKPNLTSELEPLKLEEIVVGGEYLGSYRNFYYNVYVLEILRHSIRVYFADLEMAKTIKYSQLYLLSSFVKR", "length": 998 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54HE0-1", "protein_name": "Conserved oligomeric Golgi complex subunit 5", "gene_name": "cog5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNNNNNNEGVSSSSSSSSSPLPNISSPNLISNSNIENDIEIKKKSNNNNNNIFEGDNSHIYNQFLGEDFNVVHYTSNALKVSSISLSLNTLTSCTRELGQELTENITTNYDDLFKLANNIKELDQLTDTLKLGVSNLEESIQRMKNDISEPYNKVKSHIGQLKRVQDSCELLRKLIRYIQLVKKLKNHLQAGSRDLSKSAQCINEINLLKKDSDLTGINIIDSQVVWIKTCSDQIITISSTLLYQGMENQNQTDVANSLQVFHNMTILNEKVYSIVNLTTEKVIKNIKALLNVNKLIADLPKTTITNNINNNNSNNNITTNNNNNNYNNNNNNNNNNNIISTSTDKSIWLKFESLIDTLYSSLIQILHLQRVLLKIKDPLTHKSLMEVLLIKQHQLQQQQQQQQQQQQQQQQQQQQQQQQQQQVGTTSNNTQPILIEMISTLFWKSILKVLENNLLVAAKSSNIIENTFIREYPKVSKFFLDFIKKLQNYIDIHQMDIQQQFMIVLSNINQIIGNNNSNNSNSNSNNSIESSLSTSSSSSSSSSSSSSTTTTATTSLILLSADDYKLSLFKSIGLFEKAYLEYSQSKMSTIVNGLFPQSTWSSRSTLPVIPNGKQLVDLSKTIWSEIEWLVGNNDRQLLGKLMLVVSKVIDLFSSKIESMVQPPGLIVLNSNIGSSSSTGGVNNNSNSNNNNEIITINENSKPTPSQTVNTLLFNVSIQLNSSIQSLLTSQPLERESIIVIEKSLNSLITICTNIITPLMNSFFTHIEQIFSTIHNEDWYNEKTTKMLINKSNQTCSSYMESFKTLVNYFQNQYLMRFTPCQLLNNQIKSMISKIFIVYLKYCSLLKQPFSENGKLKMVNDLTHLEFAVTPLLVSGGIKEIGESYNLIRNYKQSIFN", "length": 898 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54IX3-1", "protein_name": "Probable polyketide synthase 26", "gene_name": "pks26", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METNNNKNIQEDIAIIGFRIPGCQDNTPSELWNNLMNKFSGVGKTTERWSDNYHLSGDINNGNSGLLPLKEWKKFDPAFFGINPTMVSTIDPQQRILLKCTWEALEDAGIDPIKLRGSNTSIFIGCSTGDYLDMVKSNNEIQTNLFGSVNHSLSNRISYCFDFHGASMTIDSACSSSLNTVLLGCQSINQGKSNLCIAGGVNFILDTTIPTAFSFLNILSKNGKCMTYDEGADGFVRGEGAGLVVLKSLKDAIKDGNNIYCIIKGGNTNVDGNGNADKANFFQPSKQSQSDNIKLALESIKKKSMLDIDIDYVETHGTGTPTGDPIEVEGISKVFKENHSPENPLLIGSLKSNIGHMEAASGVTSLIKCCLMFKNKSFAPNVNFQKINPKIKLDEWNIKVVTEAIPFKKNKITSMVVNSFGVTGSNCCLVLTESINNNNNSNVDKITKNEKEYLIPFSANSNQSLKNYIEEVSKIDESLQFEDFVYKQLSNKSTSLFQRFVVTSKDWKELKYKLSQPLPLKEISSSISVKKPNPITVFVFCGQGSQFNKMGLELYNNDKNFRNYIDRFDKKLLEYYGYSVISKLRSIDDNDLITIHDPIIAQPATAILQISLFELYKHWGINPSFIVGHSLGELPMAFCSGMIDFDTVCYLLYHRSLAQSKTNGCGKMLSCNISSEEFVKNYSPRYPFLEIACYNSPNSIVVAGKESILLELSKEFKNSGIFCAMLGSLSSFHTSSQLEVKDHIYSLKFESKEPVIPTFSTVTTHLFNSNKLYDNDYIFQNIMKPVLFNETISNLYKHVENNQLGSEMIFIELAPHQTLSFYLKQLIPKDSNYFSNSNSITILSPLHKKKNDYLEIQQTISTCYCKGYDVNFKSQILIESKTNISNKSLPLYQWDDKEFWKDLEKQKRILQGPPMDTLGFSNEKSPILKSFETKIDIKKKPFQYLKGHIVKGKIYFPGVGYIENLLKMYPSQDIDIDSMEFEAPLILIEGIVTCLQSNVYKIGKNEFKVQFHFQDQKTKQWIQSSFANYHLSHRDDFDPTTNKLNIQNLISNNCNLTKLSKNQFYNFIKAKAGLSYNGEFQGVEKCYLGDNCSLVEIPFDTSNQDVETNINMIPILDSCLHGVHILYVEQCQMVLEKIEGLKYYSSTLILSKQKEQQKLYVFTRIENKDLINNSISASIIVMISDGTVFFEIESVSLKSLIPLKDPISIENPTDELFSSYLQSIDSLISEPSSYKSIYKRNEFISSGMSDLSRSDYQQFISTLLYTNLIKRNQSIESDLRNQIEFEEIKAKYCKNSKFERLFTFVIETIKQYDGINGNLNSWNEGNIDIYKILIKSTRIISKLLFPLQGEDTTIDTPQSLFENNLLDDFYNINGNTVIQNQLVGEIITQSIKPLINEKMVFRILEFGGGVGSLSIVTLNKINQLLEQHPNFQIDIEYTWTDISPSFIPDAKKLLSNIKGVTIIYRSLDLEESLIEKQLLKPSYYDFVIMSNVLHVIKEIKFGIDEIYKVLSPNGQLLFIETPYRMLICDSIFGVFDQWWGFTDTGIRVDRCCMKQKTWFKLLSESNYQDIIMSDDIKDCCFVIQAKKPSISSLEYKLKIDSQENDKIIVFGENDTFMKYLENKSTKQIIKIKTCQQFSDLITSNSKEINNQSIIYFIKTLNQLLIENFKEITLEYIQINQLLLSSGLSCKHILLLNQSTSENYLGSSISGAARYFDEFPPLKLYSFDFDKYSLNNESINIIDDIIEPIIKSMNNSNIRKELLVRNNKIFFERYKQEKRIKENYKSTSFENDKSLFVHLNANLEYELKSKQVKLKQNEIEVNVKATGINYKDYLVYTAMTPSELINHKGESNPEFGHDFSGIITRIGDDDGDNDNEFKVGDQVYGIWFNTTASHIIVDKEFLCHKPSKLSHTIASSIPVVYITSLYSLYNIGNIQNDESILIHSASGGIGLSALNILKWKNHKSHIFVTVGSKEKEKYIHDTYGDFITGIYSSRNKDYLKLIKRKLTELGSNKKGVDIILNTLSSSEHMVSNFKCLNHRGRIIDLSITHLNHNEYTCNNNFKYNYGYHNVEVLFVKGDIISKLLKNITSAIENGSLSTGIPIIEFNDSDCFNAIEFINKRQHIGKIVVNHNKENLIQELIKKTNLPIIKSNYQINSDHLGKNILVTGQSGIILEILKWIVKYSTNVENIIILSRSSLKWELELLVNKNKNKLNFIYKSVDVGNSLEIEKVIDEILMENPQINNVDSIFHYAFTQISCKEHEIDQVHLNVSHQAKTMGAINLHNQSIKRNWKLINFIMASSAAGLIGSTDQCSYVCSSNVLDTFSKYRKHVLGLPSICINYGLIESTGFVSRNQSVAVMLDGQGIRPMQTNQILGSLDLFIQNPSKSTNIILTSFNFNEFATGNLQQSNVHKFDFQFNCCLSQKSKLMANNQASENPVKDLLINNICELLSIDESKLNIDIRLIDYGSDSLTIVQIKNLIDKNLLIPNLISIQMLQNNSISDNIKILTDSYNKKKQNEQNELKNIKVGSFTKK", "length": 2531 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K45-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKILYLIIYLTLTIVKGAPLYNCKKLNCSSMNTNCKVFGCSPMFGCFETSKCPQSNVDICHTNHCDENTGSCYQIADTCNDGNNNTIDSCGPYGCVNTPVNPPEPTQSCEQKCNDNNPCTVDFCDFRGDCYHYETRCSDYDACTLDTCGEKGCEYRPMNCDDNNPCTADFCSMLYGCYHEPIECSVKVPCRTDSQCNRNNFCETYSCDLSSNICDYYTRDCGGNPCINNECRTGTITN", "length": 239 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K50-1", "protein_name": "Phospholipase D Y", "gene_name": "pldY", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIINRLFIIIVLFFVNVNSKIISESTLNSCQGGTIQIAESIPLGLDISTNLSTHDAWMDLITNAQESIDLGFFYFTLLGGSDLDPVYGGQLGIDIFNAIVEAHSRGINVRIVQNEPSESFPDTETQTLAKLGIQVRSIDWVSLVGSGVLHTKLIIIDESSAYVGSANADWSSLAQVKELGIVLKNCPTMVADTEIAFQQYWNAADFTSLPINDWGSNYQALFNNTNMASLSLNNNNNNNNKNKNNDNDGSGTNQMYEMFLAVSPPQFQSTYRTGDIDALMDAINNADQSICITVMDYTPTTLYNDPNTYWPLIDNALRAAAFNRNVQVRMLISHWNYTSPIIPQWLHSLNQVDNIQVRWFVVPDFSTNPQIPYTRVNHAKFMVTEKQSYVGTSNWSQDYFTVTGGLSYNVFNNDFTNQLQSIFNRDWNSPYTQPIQNF", "length": 438 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K65-1", "protein_name": "Band 7 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSIKKLSTTAIKFTKQTQRFNKRGFFKILNQYERGVVFNFGKFHTVKEAGFHIVIPFIQKCDIVDIRTFTYTLDKQKIISKDNINLTVDALVVFRIHDPKLAVTKANDCILLVNEMAQIKVCEILSHNTLDQVLHNRDKISNQIHDELKEALNKYGVTIEYLKLKDIHFDETIAKAIAKKVEAANLRDIKN", "length": 192 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KF5-1", "protein_name": "Protein LEG1 homolog", "gene_name": "leg1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSNKTIFLILLFLINFNSIYSFNFKKEIKISNDKINLPTYNPWIFQDRFNLYSILINSTNIPVFGEDNSNNCLHGLQLQFEWQNRSGRLEINQGHVNTKSWWGDMNYYLSIIPYLSAMKMGLVPVVEIVSINDQRFCSTYEDCDQEVLNNWDNFFQQIINIRNNGSEGDDQQLLKFMWTAHIGSIDKATKLFTDSLLLLPKNELRFGNGWAHFVDVIATVNFNTNYSTVYHLGQQLPPIMLNSNDTHPSSIESFTKEQRNVVLTMYEINDLSSNNLVWNSFMYLLKKMTKNEICRNLINNEINIFLNSPVPTIIEILFDILTNNC", "length": 326 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KK9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTEVPNQKHNDGGVGVTVGNFVKDNETNVNNNNNINGKGENDNNNNNNNNTIIDEPKLLNNNNNNILVIPLTTNIIDNELNQQKQHTLPLPLPPPPLPTQPQQITPPLPTQTQLPNNMLPSPRPIQQPKIRQQTQQQQAQMQQLQLQIQQEIQLQLQQQQQQQLQLQQKQNESEINGLFSPNFSSSSSSSLSTTPNMHSPLFNNNNNNNTTTTTTTTTTTTNSSTNNTNSSTQTKNASTNKISQDVIGVFDDTDTESEGEEYHSGRSIDFWNKDYKDIAWRCNWIDLQIRDLQYQSMVCDQLYHKVRRSKQKIIPDNKSLSSSIDNNNNNNLKSIPIETIDHSNNAITSSNIPYSNNEEEQQEQQQHPSQSIRTTSVVKLRKPRKLIRRPTVKLSAKQMTTDLEAHPLFTFHKGYFKFENAIKTNIINEMEIKYQEKEKPPKLLTLSEERLKQYINSNEDVDVVNLFATNESKRLSEKRRGRIPSDKKEKVSSHRLKSGDEIDGTSSSTATATTATTTTTTTTTTTTTNKKSRRSRREKKKEKEREKQEKEKHIKTKDEQKDREKKEKAREKELEKERKREKERIKEKERQEKERLKKEKELEKNKKKEKKLLKEKEKEIKEKKVKLKNQENIIEKDLTINNTTTKTTKSKKSSSKVKKSEQEGVKLENVEIEDEEVEEEEEEEEEVEDEEEEEEEEEEEEEEEEEEIEEVEDNEEEKRKEERRRRRRKRRILRRRKKLRRKQRKRQLFLQKQQQQQLLQQQQQQQQQKLLQQLKKRDESNGLSYKEIITPEWRDISSFANNDPSLPSPLLLSNPLLAQDIKNITTTTTTITTSEPISKFSTITEEELLIRQTTNGIDGTPMNGIGEDSESSGSEIELDEDAMKIIHARNEIEEKRRFFNTIKQIQMENPVPSYKRKKESLPVEFVAPTVEELLPSYHFNKKSIKLLGKSWNGDFEYYSSSDEDDYDDSDDYDSDDDNDDEDDDDSDSDDEDESDSDDYDSEYDSDLSDSDDSESESSDNELDGLYSSESEINHNSSGDEDEMDVELNNHHIPSKNSKNSKKQPVNNNVNNSNNLNGSSGGGKINSKPSKQQPRNSKANPPSKQQPTPLKQQPTPLKQQPTPLKQTTTPSKATPSPKQQSQQQQQQQQQQQQQPQQPQQPQQQQQQSPKPTPPLVSTTPPLSSVPLSPPTKTIRSTRGVSSLSNSTSSLPKQTNTPPISILSRKRNQSQSSVTDAPLSPTTTATTTTSPKPTTRRKGKLQETIPVEETKIIEETKPFEETVPIKENSTTTPLKRTRRQTKQQLVNGETTTPLTNGDNHVEKTDSNSTDVKVDPTSWWGDKQYKIQPVMEATVIRFKRVKNDDGDDDDQIQNNQKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNINNTEDLESKIKETKSINIPMEISTNGNDFQMKEKEGE", "length": 1472 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU3-1", "protein_name": "Probable polyketide synthase 25", "gene_name": "pks25", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDNSYLNNPQFDINNGNKEVTDDDNNKNNQDNLVAIVGVGFRLPSGENERNNTPQALWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGITPNEAQTIDPHQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGSSTNDYLTLNRNEVKSNVFGSMAHSIANRVSYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDPYPYKAFSILNMLSKSNGRCKSFDASADGFVRGECIGVVILKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPNGDPVETEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNENKNTSMIINNFGVTGSNCCLVLSQFNNTNKQKQQMKTKINNYLIPFSANSVESLKKYQSLIINSKENELKYSFEEFVKNQVFIKPTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKRSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGLGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGAGYIDNLLKLYPNQDLTINSIEFKTPLILSDDNGQFLQTNVYQTGKSDYRAQFHFKDNRTNVWVQTCTANFQLYNNGKVDKLNLEEIKSTKCNLSSIPWDKFYPHIKNRTGLNYKDKFQNTIECYLGDNCSLTEISLELPENFHDQESFFNTPILDICFHGSIVLIKDNCKLVLDKIDGFKLYTSNIPKNRFDHLSIFVYTTMKSTKSNSYNSTYTVMLEDGTVILEVENLICTSLTPVKDPLLIEIPTDMYYTPYLQSKDSQIQSPLEFKSIYQNNQDNDSLLIPNVVLETIKPLINEQMEFRILEFGGNNLSNSTLLLNSINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIKYSLNQIYQILTPNGNLIINEQQPNNENNENNEDSLKNLLVNCNFNSDIMMKSSSVSDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCNQDEQFQQQQQLINKFESHYNNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSITFEYVQINQKLYEFKSKCTHVLITYDSQSSNYLSSSILGAARYFDEIPTLQLFTFDFDKDSLINLDISVIDHLIDPKQNTLIEFFIKKNGKVYFERFKKGLKKNSFKSESYHQITNEQEILISKLDENLDYQLKSKDSILKPYDIEVEIKATGLNYKDYLVYSGLIKLKGDSVDFGLDFSGRVSRVGIKSSKEFKVGDEVYGIGQSTSSSHIIIDSMHACHKPSKITHVQAASIPAVYATSIHSLYNIGNLREGESILIHSGSGGVGLSALEILKSNNHSSPIFVTVGSEEKKQYLINTYGNLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDSNFKCLNPEGRIVDLTITHLNPNEFIDNNKFKYNFGYHNIELYYCEKPTIKKLLQSISKSIENNTLNYLIPITEFSNSNIKKAIEYINERKHVGKIVISHDTDITNKLIENQPKIDYSLLKSNYKIKNLGKNVLVTGQTGLILDIINWIMKYNSTVENIIILSKSSMKWEMEFLINNNKTKIKFYYKRCDIGGDSDSINKTFDKLFTENPTITNIDSIFHFAVVQITRKVKDIDMKSLNISHDAKTIGAINLHNQSIKRDWKLSNFILASSILSKVGSLDQCGYVSACCVLDSFSKYRLSIGLPALSINIGAMGGSGMVARSELVETVLNGQGYNLTSTNQLLGTIDLLIQNPGQESNNLMVGNFNFPVFNNFKQKIHQKFDFIFNALDSNSENGDGSNIKNSTNIKDKFLNKVSEFLSIDSSKINNDIKLMNYGADSLITVQLKNWVDKEWSPNLITIHQIQSNSIGMVCQIINDNFEKKK", "length": 2380 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU5-1", "protein_name": "Probable polyketide synthase 24", "gene_name": "pks24", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQNKINKAEILQVDDKHVEENLVAIVGVGFRLPSGSIENERNNTPQTLWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGINPNEAPTIDPIQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGCTESDYHNINKNEVKSNVFSSLNHAISNRISYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDSYFFKAYSSLNILSKSNGRCKSFDASADGYVRSECIGVVVLKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPTGDPIEVEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNKFKNTSMVVNNFGATGSNCCLVLSQFNYNTINNNINNHNNNHNHNHNHNNIKINNYLIPFSANSVESLKKYQSLIIENKEYESQYSFEEFVKNQIYNKSTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKCSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGSGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGTGYIDNIFKLYPNQDLTINSIEFKVPFVLTDGIGQCLQTNVYQTGKSEYRAQFHLKDEMNNQWINTSNSNFHLNSNDNYHEEKQKLDIQDIKQTKCNLSSIPWDEFYSLMKTQLGANFYGIFSKVVECYIGDNCSLTEISLELPENFHDEQSFFNCPLIDACFHGTVILYIQKNCKIVTDKVEGLRYYASNIPKNRDEHSSIFIYSTLKSSPSDDLLSSSIVVMLEDGTVIIEVDNLVVKSLTPVKDPLLIETPSDFIYTPYLQSKDSQIQSPLEFKSIYQNNQVDDGLLIPNVVIETIKPLINRKMEFRILEFGGNNLSKSTLLLNEINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIEYSLNQIYQILTPNGYLIINEQQQQQQQQQQQQQQQQQQQQQLLNNENNKESLKNLLVNCNFNSDIMIKSSSISDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCYQDEQLQQQQLINKFENHYNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSVTFEYVQINQKLYELKSKCTHVLITCDSQSSNYLSSSVLGAARYFDEIPTLQLFTLDFDKDSLTNDLDLFKTIDYLINPKNNIQREFYIKNSGTVYFEMYKKELKNLKNSYKSESYHDLSKQQDQLVSKLDEHFEYQLNSKQIDLEPYEIEVKVKATGINYKDYLKYNEMIKVNEAGIGFDFSGVVSRVGIKSSKEFKVGDQVYGIAYETSSSHIIIDSLLACHKPSKITHVQAASIPAVYSTSLYCLYDVGNLRDEESVLIHSGSGGVGLSGLEILKSNNHSSPIFVTVGSEEKKQYLINTYGDLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDTNFKCLNPKGRIVDLTTTHLNPNEFIDNSRYRYNIGYNSIEILKVGKSTIKKLLQSISKSIENETLNALIPITEFSNSNIKKSIESIKERKHVGKIVISHDTDIIDKLIEKESMIDYSILKSDYKIKNLGKNVLVTGQTGLILEVLKWITKYNSTVENIIILSKSSLKWELEFLMNYNNNNNNNNNNNKIKYHFKKCDISNWNLINKTIDQVLKDNPTITNIDSIFHFAALQINKKLKDIDMNSLNVSHSAKTFGAVNLHNLSIKRDWKIINFILASSVVSVLGSFDQCSYVSACCVVDSLSQYRKSIGLPSFTINIGGVSDRGYLSRHKLVEAVLGGQGVELISPNQLLGTLDLQIQNPNMPTNAFVNNFNWPLFKSFKQKLHQKFDFILNPINVDNSISMENDTNQSSSSTNVKNKFLNKVSELLSIDPSKINTNIKMINYGADSLITVQLKNWVDKEWSPHLITIQQIQSNSIGMVYQIINDSLDKKKKEMDEKLLPITAKTTTTTKNDPNDKTEYKYIAGGDCCREFSIKFHYSSVVNFII", "length": 2471 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LI2-1", "protein_name": "DNA replication licensing factor MCM2", "gene_name": "mcm2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSQNNNNNNNNNNNNNNNNNNKRKTKTPSSVNHNNTKINEDKDLYNFIDKIRDKTDKSHLEDEYDEDDNTKDGKFNKVEDEIKNDIDSEEDDDDIIEDNEHLYDGDEDSENLSSEGEGDDLLDEDLQDQDEEEVLGDEDNHYEMEGLDNETYEDIDKDKKTEVDSILTKRDREEQKTRQATNRHQYRISSFLLDENDENMVDEDTENNKLLEKRKANLIKKRRETIRQQNDNIKKDYDGSVPSFKDGFVNSERYFEDGDGDDDDDDDDFDIGDNGQVVNLEEPDKDKCLREYVCMSGPRNEISKQFAKFLLEFKEKDGFNPIYQESIQKMCAANKESLMINFTHLCASTVFGVWVAEIPTEMIEIFDEVALKVVLRIYPNYRNIVKSIHVRITHLPICESLRDIRQSNLNKLTKVGGVITRRSNVYPQLKHVKYDCVKCKTTLGPFSLDGTFNDSKPPIGLCPQCQSKGPFVMNSEQTVYRDFQKVTLQESPGTVPPGRLPRTKDIILMDDLIDTVRPGEEVEITGIYKHNFDLKLNYSQGFPVFSTIIEANHINKKEDLLSSFILTDEDEREIRKLSKDSNIAQKIIQSIAPSIYGHEDIKTGLALALFGGTPKDVNNKHRIRGDINVLLIGDPGVAKSQFLKYVEKTAHRAVYTTGQGASAVGLTAAVRMDPLTREWTLEGGALVLADRGVCMIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLTARCSVIAAANPKRGKYDSGLNLLQNVELTEPILSRFDIICVVKDTIDSFKDRELARFVVASHINSHPDNQNNPENDYLNRATKQSPISQELLRKYIIYAKRIKPRITDIDKNKISQLYTDLRRESRAGGFAMTVRHVESIVRMAEAHAKMHLRDYVTDFDVNTSIRVMLDSFINAQKNSMYKNLRTKFAPYVIFQKDINQLLTQLLQTLARDFSNYHFARSGDIPDQINIPYDDFDTKARELGISDITSFFRSNEFTSNNQFTLKKDKSTIIYYRNK", "length": 1008 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LX5-1", "protein_name": "U1-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKITESNNNNNNNKKDNNKHWCKYCKIFIQDNISVKNHEEGWRHKNNVTRFVSTQNRDKKYQERDQKEAEREINRIKNTGARSFREKDLSRVLDEKKHQQQPQQQPQQPQQQQRIFNNNSNNNNNNNNNNNNNNNNNNNNNNNSNNNNNYHQPQYPTTTTTTTTTNTTASNKNCDNADSKFKEIQEQQRQLLSNNDYYNYYQDRQQLIYDYYQNEGNQPIPEPPLNTSLYGYTESPLLKSRLDSSTDTLSSSSSSTIISPSHQKKRKQDDTNSPIPAKISKDECVNNENKDKSNEKENELNNNNNNNKSGEGEEGEESDDNDDDEEESGSGSESESESSEVDQSESIIGQWQTVDPIESAFGSTRKDSDDEKDKKDKKNKKDNDENKRDEKDYSDVSDADSEEESVNITKRAMANHKKPITLTNVISPTIPSTSKNFESVLSFNKSGVFSLNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEPPQPTPQITLKFNKPLKQRNTRKTNIEDKQS", "length": 514 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54M95-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLISILFFLFGILFFLKNVESASDVVCSFGYQACGNNCYSPSSGQKCYPGGVVCSFGYEACGNNCYSPSSGQKCNPGGVICSFGYQACGNSCYSPSSGQKCYPGGIICSFGYEACGRSCYSPSSGQKCYPGGVICSFGYQACGNTCYNPSAGQRCFN", "length": 158 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54N59-1", "protein_name": "G domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDLDYAIIVLRHHLESNGRFFEISKDDVKNRVTIKNKLTQEERYIDFGEIQNFIQYDEFEYNLLANGFQENLSILKNSILPLTKAPDSCSSNRGKTIGNSSLLINKVNGLIDDDKDTIYLLLIGITGVGKSTFVNMVVNYIEYSNLKDALENATLEQIYTIASKIEIQDENKTHKFSLGDVEDYKIGSSVTQYSRQYRIKLPDGKTLCLIDAPGVGDPQGTLQDNKHFENILHEISSLKKLNAICILMRPDETRATVLFKYCLNQLLLHLHSSAKDNIFFCFTHTRGTMYKPGPTRAILEDHLKKMKDQSDIEINANEKTFCFDNESFNYLAVKKYNATAGIETNFSEDDEFDFGRSWDRSSKEFKRLLEEISKVQPHDVANTICINNARTMISNLAQPMSTCISNINTNIKLMEQQSEKLRNNSIGDESLLYIPVSVVIAEKLENSLLVCTKNGCSSNTDNPCNIDVVSPKWYSSLYWCDNINKMGTCKKCSNTGVLPCLWFDHQVVTIKETPQLNQLPGTDKKTIGQRTKSEIFNERELLVTKMGERKIQFQEEYDTIKTAIVDFSVFLWHHSLIKFNRYYEDYINMQIKQLENSENSQELIQKLNEHLSEYKASVEEIKHNVQNNKASVKTQKEIFATFDKLLTLPNVGYIIQNQIKLKQSSHYKSEAVEIDLFSKMKNKTKQIIK", "length": 689 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ND5-1", "protein_name": "Multiple inositol polyphosphate phosphatase 1", "gene_name": "mipp1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MMVKIKNIIILFCIFGLLSNVSSLSSSSSSSQSSDNNGNLSPIQDYDLEFLSKHLTTKTPYWILTKNGDSNSQGDGSSGNSNSNSNSNSNSNSNSDSSNEPPEQCKLISIDFIARHGSRMPVLNSIEKLKEMTTSILEYKEQVNQGFNWIFNYSVPYPSDIAGNLILQGQYEHYNISKRLLKKYPLFFEPMKYKPQSYSITSTAISRTGISASAFSYGLLQGTGSLGVDGFQPVFIETASLDQDILLRFFATCNQYVDQLKNGTLINKDEQTKWNQMVFPNISNEISERLGLSDIWLPTSNVISDIFEACAYEISINNISDHWCSLLSKQNILDWEYSQDLSNYWLKSYGHEINYQIATPLLNDILSGFDIYINNNNNGSSSSSSSSSSNNGDNSGSNGSSGSGSSTSTSSNDNGSTNNNDNKVEPTSILRFGHAETIIPFISLLGLYKDEQKLFANSSTEQIENRKFRTSVVSPYASNIAMFLFDCGSAADGFKILVQHNELPVLVPGCDEIYCDYQQFKSIFKQGIDNFKWNSYCNINDDDSGSSGGDSGNGNGNDSHSKKSSYFLAIFIPITFLVGGTIGGIFTYFSYEKIMQVKNRKKLTQYGNDEFISSPKSKSFSFKPTKFDSRSPLIQ", "length": 635 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54NT2-1", "protein_name": "SH3 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKITTQFARTRQMLFTKTGHSEETIDVQYHYEKERTFSTEERLVKIQKNSKKLIELYKDLNKITTDIAQDACDLYDTQDPMWTPGSKLRDVATNNDKHLLDYTEQMAEPYTKPLSDYISQYKEARKRTEELTTRKVDMDRYKNEVGKLREKGAGSSSKAKLAPTEEKLRICKEGYDSLHEELLNDLPRLNEDKLIFIDYLVASLIKYQSEFHKKVSYEWSPLPSLTKHVDEYSGRDHQPVITSVERSAASINLRSDPVFKSNASIKMKPGAQDQQQYSTVDKDIHQSPNPSNLNLQKSTPNPYGGASAPPPLYGGGGSSTATALYDFTGVDSSELSFRAGDIITIHKSEGEWWEGELNGIYGFAPGSYLRMN", "length": 374 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54PW0-1", "protein_name": "Annexin I", "gene_name": "nxnB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEYKEKEINTSSPSSPSKTQISNIENDSISEKAQEPISEKVQDPISEKAQESISEKEHIESNNVSEIIDLIKSGDQHLNNNNNNNNNNNNNNNNNNNEEENQEINYNDNQLSNEEIVEDVKNSNINNNNTIEKGNSSQNNNKNNNNNYHTEKCDYCLICKCYDYGEITHNIVEDSEILKQSIRYSYVDDTSINSILAHRNYAEKEAIMKKFNDKYNKSLETELASHTHQKYRRTLISILTEPSIYDTLNIENSIKTKNSNTLLEILLTRTNEQKELIKRIYLVKYGKNIEHDIIAKFSNGANVNGNMMKQLLISMLNNDRDSNSNQSLDMNLINTDSNRLYQAGEHKKGTDHEVFIEILSKRSFSHLSELDRVYENSNPKGHSLRKAIELEFGVSKSIKQVKISLLDILLFSKEPSKYWAEQFNRALTSGSWGINEIDLTRLTITQQHQASKIKQAYISHYDNSLINEVSSKTSFRYKKIILSMLTV", "length": 487 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QB4-1", "protein_name": "Kinetochore protein Ndc80", "gene_name": "ndc80", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MHNNNLTYQQYQQQQLLIQQQQQQLLYQQQLLQQQQQQQQQQQQQKQYSHGRPSTLGLPSRKPPPMQPQPQPQIQAPIQLTFQQQQQLLQQQQYQFNNNLNTINNNNNNNITNRHSMVTPSTNLGGRSSLGPPSAMLTNNNNNNSNIRNTTFISNSGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNNNNNIHTQVQPKKSIAPSKSNTISSNTTTTTTAASSSSSSNPSITLRQETRPVNDSKFQSQCLLRLQQFLSQSEKGYPRAITKDNLMSEINGLMKFLCLHIDPHFKLPTEKPEEEIISFFKMMGYRSAGFTKRVFSQVGNAHTRGHLLGAIIWMVELIEYDQIIRQMDSHIEREILNGNTIDENGNLTTTTSATNTNEDGNFNLTTQIFSKHVFKSYEAFLKGDDGNHVDQFLEEKFNEVNELIVKECEESMERQKKIKQEIVNLTQYITNDDIDQLNFKLEQTNQEIIATHDLINDNELEDQKLDQEIDQNQTHFQELEIQQKEHQKKKQEFESRIQIQQSNSVDAKRINQETFELKEELDKVQREQSRHDQLKQEKSKEIKQSINEIEKLIQSYKEICCKASLVTNDNLIIEKYRIIFTHTLNNNNNNNNTNNSSILNISNNIINNNNNNNNNNNNNYEEGIISISDLKLVIKNLQELNLEISQNISKIKQDLLKTSNLNDIQKESISDKELELARIKQKHDKQKNILKQEKQDQTFDITQREENIEQLKSSNKKLIDDGVRELEKTIQLLESQREEHSRLKIDLKQSSEQMKLQYLKRIERFISHRQLIGSQIFDTLRQMEELSLTQKILFPPPPPPPQLSQQHQQLMQQQHQNNTIDIDE", "length": 855 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QD2-1", "protein_name": "Probable cytochrome P450 517A1", "gene_name": "cyp517A1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIINVFLFLIILFLVKDFVKKNKKIHTKSPSGPIAFPILGNVVQIRFWELFKIQEHELFGGYSKKYNGVVRAWFGERLFFFVSNYDVVKYFQKDENFHNRPSVLVPGWRYASSNGLGVMSSSDDKWKRAKSSVSQSLRVRTTKKLMEEKAIEFIDSLEKISNNNEIFYPKGHIQGYACSMLFKYMFNQDLSVESGMSRTIGNAVEHVFGNLSKLTAFDCFEIFSPLYDWFFTRRLKGCDIVRQIISSQNENHLKSIDPSKPRDLMDDLLIEYGLNEITKEDTMQINQICFDIFGPAVGTVTITMNWVILQLCNRPELQEIAYQEIKKAVKDDEYVNLNHKQNAPYIVAFIKETMRLCSNGFGLPRTAKNDQICGDFFIPKDAIIFINYLEISQNEEIFKNAKEFNPTRYLDESLPVPNIHFGVGQRACPGRFVAIDKMFLGISNLLLKYKLKTQNGEKIDDSIQFSVSLKAKDYGIKLEKRI", "length": 483 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RM4-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKVILIYFIVIYLINISFSLKPYQQQQQLHNFNIIENNNNNNRNEKVIIAHPKIPPYWLIENEISNPNDLISFKILLKQNNLNKLNYLFEEISDPKSKIYGEFLSINEINELVKSSESDFNVVLEYLKSFNIGNIENGSEIKVFSDYILVETTIEKVSSMFNSKFSNYKNKNNGNTRNRLNGPAYLPKQLLNSIDFVTGLSEFFENNFKIENYLNNNNKNNGDSDSDSGSGSGSGSSNSYNGGLDDILITPKVLKSYYNVPNELIGKFENNSIGVIAFNDYFSMGALELFDEKFNITTTKDNLKIIGNDCLGKGCDQYESDLDIQYIRSMGENISTDFISFNDAQWILDYLHSVLLMEKPPLVQSISYGWAELLQCDVSNGCSTFGYDSKQYVDRTNSEFQKLALLGISVLVSSGDDGAPSMGGSSGNCPIDGTVYCPTGGCNHTKTMCPEFTIYNLNGGSDSGGSSDSYCFFPMGIASSGCTNILGDPSVLDSGMKIFSEKNKQCNLAIEYDRTNLPHVYSECECKDLVNVTFRNYHFTQYQFNENNGALFVAEYPSSSPFVTSVGATQFLSRDEKITTEVGCTILQGAKITTGGGFSSFQSQPKYQQYAISQFFNTSFNSLPPSFSYCPTNRGVPDISMVGHNYKIYSSDGNNKDFNQCPCKSLPVDGTSCSSPTLAGLIGLINDQLLLNGKTQLGFLNPLLYQMAIDEPRIFNDITGDSSNRCSRSYCCLYGWSTSSNTWDPVTGLGSIDFNLFLSYVLKLKGI", "length": 767 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RX1-1", "protein_name": "Translationally-controlled tumor protein homolog 2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLYKDLIGNSHDDLLTDRYEIKVGDVTFEVKTKMITKDLNVVVNNNSLGGSISTTVDNNNSITLSTNLEDEFENVEAAGTFQINNLVEQLRLVETSFDKKSYLAYMKLYIKDLINHIKQQPSNSDNEKIEHIQKGIQSFVKTMMDGENFKKYSFFTGSSMDANGLVALMYYKDDDPTTPTFVFIKYGLLQVDV", "length": 194 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S19-1", "protein_name": "PHD zinc finger-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKNCIVCSKVGQYPLNLVKCYECKSYYHKFCLQSTKIPRGEWYCSSCEIERKNKKNKKRKLDGAGKKNKKNNKDDDDDNDDDDDEGENDEDDEDHQDEDSGEEEDEEEDEEEEDDDDEEEEEGNEKNKIKKRKRIPINQSPSIKKRTKDIDSEEEEEEEEEEEENDSEEERRIQKRKNKIKQQQQLKMKEKKQREKLRKRRRRTRSSRKDDNDQDDDDDDDDNNSNNSDDNDQDENKNKQKRKRRKDKKKDDDDDDDQEEEEEEEEEIVTGKRKRRSLNKVQPNQHLNNENEEDNEEEEEEEEEEEEEEETDSSEEFLENLVCSSCNTGKDEDKILLCDTDNCSRGYHMYCLRYPITSVPKGDWICDFCRFGDISADLHSADDDEDGAINSQKEIEKQKQKQKEKEKEREREREREKEKEKERERERERREKEKKDALRSSFSNIPIPKINNINGSNGSNSNNNNNSNNNGSGVNRQSPPKVISKKSPQQSPKPLKSPTSSSSSTTSSPPPLHQQSKVTSKISPNSQQSIPTINSNINKSPPSQSKNSPPLKPLTPDLKKQIPITNITTSSTTTTATTTTTTTTTANTSNVATTTTLLKPSSQKKPTILSDKKQLNTSGTNLPMNGKKKEDLESSASHSILDMIPPNNKLFNNSIQSAPISWDLSGSQHKLSTSSSSLPNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIKLQQQLQQQQQQLHQQLQQQQLQQQQQQLHQQLQQQKLKQKQIEEEQEKEREQKRLENEQKLLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEFIDQKELEDKLLSQFDNQNLKSPLSLTSTTSSTLSHLPQSTFESSTILSNKTIKQKWKSRILFETDQICQCEIIQIYGMDFKVNPFQNNITSKTLELSFNQVSFDNLPKPIRDEFITKSSTPSTCLDIGAIDLPNSALLIFLPEIPNQSSLYHLIIHFIENRVAGFIDLSNDLSLYIYPYQTSIISLDLIGILIDKKSLSPPSLILNQQQKQQKQQQQEQEQQNQSFDIKNICYIGINHISMNKILTSQGKNYFSFSNFNELTLSSDIKNFDLVVVDNKMVNNQTINKEINNLMQLQPTTNNNNNNNDINNNHDTLLLVIKDVEFSKWLVSQKKFPNSLEIQKIFQQQILFKQSRCIFLLDNSIIIENESSYFVEFISSFGKFKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNDWTIKISSTIFDELLPFGHQSNVKKKIDEIKRGINQQLIVSYDFSPMVPKQSSDFLLLALRIAHSKKYKQVFLITSNKIIQNQSKRYSNLNLNCLSLEGGIDYIKNINNKFSLKI", "length": 1361 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S56-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDLFSHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVGECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54SW0-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "NQAKSSTIQQPTQTQQSNINNNTAKPRAAPPLKLVITNSNPSLKQKPQSQQTIPQQSVPQQSIPQQTIQQSVPQQQPNQSQQVNVNRTINPQQQQQQQQQQQQQQQQQNINRTAPLPQQSNYKPQPGVIYQQQQQTQYRVGTPLTINRSPMVGMVSKQPMSSSQQQSQSQQNIQRVPCQGKCCAGLAVKPLVPINSITAKPPPYSTMGPRGPISGGFVRTSPTGAIIGPSPQQQTMSRAMVNSMPIQPQIQIKPKPSPLNNGGIPITTTTTTTTNPLNKSSPSTLTQSSNTLASSNNNITTSNSLSSSTSSLPTTSTTPTTKPKSKPRSKSNSNSQTSSSTTSSSSTPSTPTTNSTKNKENTTPNKGDDSGTDNEKSSLSNSSKLLPTAYTMDQVLPFNPNQMFLGPEDKYIKSATRTYHKIPTNPSVMSNNRGAEIPSSLEYILDIPIIHDEPSSKNNPTWGRLILDALRRLVANKKTTRITERLKLDNMYKDMDSRSNQDKLDWKNGLVNEAQLNYLLSFLSNTIPFPDTPEKNKNKYLSSSDSQIINSNDQSNSLNSNNSSNNSTTNNNNSSTTTNSTNNIINNNNNNNTSSVPNSTNNSNNSSPEQQDVIDMELKLEPDNSMNFPIEINMDSLGSYIDDSFTFDNSSYDDTATISSDDKNLPITTVMPPTTSTTSTPQTITNTIPTTTPTIISPPTITTTTTTTKTTSPPTITTTTSPPTITTTTSPPTITTTTTTINSITPTTSTSSTINSNTTPMLDIVIDPVISLELLDENHQQQQNKEVKEENVHSKQQPPQQQQQQQQQQQQQQQQQQQQQQQQQQQQEDFMIQVQTSDLETQTQIQQDKEEIQVKPIVDSKKSGNSPTQIQQQQQHQQQQHHHQHNTLTQGFEFGMMMDIMNSPSSTSSMKRKRDDVDQPINQINNSSMVVQQNNDFFSDFNTIEAPFSSSHHSSQLSFQTPFSPDIVIDSDFQNKKRIVS", "length": 981 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54T36-1", "protein_name": "Probable polyketide synthase 19", "gene_name": "pks19", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFGNKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSITMGFQSIQNGTSNLSIVGGASLLLDPYVSKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSTTSTPSKPLLIGSLKSNIGHCEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNINEKPVSMVINNFGVTGSNCCLILSQFIEHSISLNGNNPSYPIESQQQIFLIPFSANSVKSLKNYEDLIINDNNLSTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTSNDKSSNITIKRNQPLIVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLDLKENNIFCAFLGSLSSFHTSSQNSTKNEILPLEIPSRQSTIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDINFKCQFNHNDDDVNSIRNNSTIILPNYQFDEQYYWKVDINFEQYRLNGPNVFNNLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNKDIVINNLEFLAPFVLKENVKHILQTNVYQLGNTDYRVTFNIKDNKANQWVQTCTGNFQLISLKDNNNNNNNNHSSKYNINQLLSECNFTTLSKQEVYKYSKLRSGITHLGTFQGIEEFHFGNDLTIARIQINYENFDINGKPVYQTFDKSFFNIALLDNCIQAITGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLEADSYKSSVLVLLEDGTKLLEIEHISFRSTLPLIDELLLNNPTNELFTNNLQCKDSLVNILSIDNNETSSSSGSSNTVTEIIKQTIKPIINEKIVFRILQSFSDSELSKQIIEALNQIFDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDETIIKPIFNILSSNGLLLLIIEDDIGIRFNINNLIGVGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKHSKYTNEFKKLISNNHTNRKQTTISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGASRYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNEIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISDENKNCEFKVGDNVFGVSHDATASHVITDVLYVSHKPNNISHIEAASLPIIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIEFMHINKRVVSRLLKSISNALNENKVKLIPITTFQIENVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKIVDVGDSIEMRKSINQILLENPNIDNIDSIFHYAFTQVTKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCTYVSANLVLDSLSRYRKSIGLPSTCTNWGTIKSSGFVSRNDSVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKYSNLIVSKFNYDSIKKFASETSTFQRLDFILNSIKEKDNDNNGGENISISESIQMKFLNKISELLSIEQSKINTDIRLGEYGADSLTSVQLKNFIDKENKSNVITLQQLQNNTIGVNIQIILEQIKKLDSNETKGKSKKIIKKDSAPSLEYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKVKVIVGNLASPLLGLSKLDFGFVSNQINLIINSGADINLASNYEESKVVNIGGLIELIKLSTTGDYQKPIVGFSSISVFFESPNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLFREAAKRGIPSMLIRLPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPNIDKNILTSPIGWIGLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSSIKSSFSFLEKQYGCEMVEYEQWKNIINQSKILSCIKFKTFHSLDRLNGVYNLGHGFGVSKKTKELLQSMNSYEGGMVNEKIIQNHINYIFKN", "length": 2778 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TD0-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "V4-7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISKTSLLLLLLSIVALASAISVQRVPIADVTSAPAHFVQNKLAKSYELVQFKILLKQRNLDILEEKFWDVSSPKSENYGKFLSKEEIDSIVAPSPKDVKVVVNWLIDNGLSKNEMIVHSDFIQVRTNVGKASTLFETSFAHYSSSRTALKRIRVVGQASMPMHVLAKVDLVLGLSDFIEDNKMSESMRATKKQVQGSTVSITPAVIKQYYGIPTGQIGVESENFQSIAAFSDFYSSGALQFFDQKFGIDSSTVRVKNVGQNCIAQNCDQMESDLDVQYMTAIGNNITTLFLSSGNGEWIIDWATAIQQYNPIPKIASISYGWAEVEQCEITNSCSTLGIDSVVYVARSNVELQKVGLRGVSVFVSSGDDGAPSFGAASGNCPIDGTKQYCPLGGCNHKSSQCPMITIMESNGTQCFFPMGSESNTCQSMLQNQNIVNGINEFVSSNSKCQVALEQDTQQNYHIYSSCTCDKLKPYSDSDAGFKIVGYSYDQDAGTLFQPDYPASSPFITSVGATQITDVTKPEIVCSVATGAIITGGGGVAITQAQPSYQADAVATYIKSGTLPPSYSYNATNRFYPDLTLVGHAYEIAVPNTLTSNTCPCALESVDGTSCSSPTLAGMISLINDKLIGAGKPTLGFLNPLLYQAAKEQPNVFNDITTGANNCNRAYCCQYGYTATTGYDAASGLGSINFKNFEQYVLSLN", "length": 702 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TX3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLIYAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYFKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKAHTSTLNDMCRHWGVFRVKFYQNHPKINELPDCIRNDNDEPLKLKEIYELMIKDRHPTPRRTEWQKLWAVRYNTAIPKVFININSISHQKGRNTLFRFFSRSLPGINHERDTRCKICGHLFRDPYSHLFTLCQDILDIEKTIISTVNKLSFIKIHRWSMDTLDISKYNRTERIFPNLIGIIAHQLWKIICHKLFNTDESKPEPKFEQKVIETELLNLIETEKFITLKKIKHDEAILKNTNQDLHKYKFNKAWQTPAAPNPLPI", "length": 1097 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54U20-1", "protein_name": "Peptidase S54 rhomboid domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIYGDTREFRNIHFHLNNIRIVGAIFGQDGFIHKKIPLATKVISIICSILFALSLVAPSMFGSYKTCLSIESLTNSFLDNLYRIILSNFAHLSIYHIVYNMITFLDLAKLERLTFGTLKYFYLLFLFGIITNLICLFIYFIGRNNVCHLGFSGVLFALIYIESNSSGRDVFLFNAVKIPSKLYPWAMLILAHVFVPRSSFIGHFSGIVVGILFIKGYLDIFILSNQKLSEIESSQLMNIFTTKNSYFPIIKFGGSRRSYNTDRKSLDGLFFELKNLFNPQQQQQRQQQRQQQQPQSPQPQQPQQPQQQPQQQPQQQPQQHQRDNFRNDNNDNSNNYDEYDFSK", "length": 343 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VC1-1", "protein_name": "ABC transporter C family member 15", "gene_name": "abcC15", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKKIKNIINKIINFFSTIYILCKIYLYYNIKNRYEAYNILSVYGDDDFFNKPCPEDSSNWKDKLTFKWVERIIFVGFFRAPLNLNDISDLPSSLKVENTAPLLKDIIFNDSTIPLIKHIYSKFLPRNYIATGLFVFVSVFSFITPLILKNFLSYVEKIDEQKHIYIGIIQCFLLFLSSFINMASQQYSYWFGFKTSLEVKGALETIIFEKMTKLSNLSKKNYNIGSMLNLMSVDTDFFQYFFCHYYIEIFLFPIQILSLLGFLIYVIGIAGFVGFLVMLITIPLSSFLGTQISKNLSTSMGYADTRISLTGELINGIKFLKQYAWEKMFCERIEEQRKLQLKYLYIRIIYWVLVQIVTQASSGLVLVSTFTTYTLLGYEVSLEIAFTSITILQNLRRPIESLPDCLHKFISLIASAKRIETFLQSSELQNQPFIHNQSGLNDILIRNINFNWNEHNLKLKNNKNNQNNNQNKRSIILSSGEQFEITNDFTFDGIDIQDDNYDYEKEYKINYNNNEEEENFMTDCLLKIKPLIKDRRLQQQQADYQDLLSINLPPPPSENVDFKAPKGLLTIISGGVRSGKTSLASGLLGEICKAVDKSSPDSVNSILSTIQQPFLQSTSFRENILFGKPMNMERYIKVIEACCLAPDLLAMGEGKDLTEIGERGINLSNGLKHRIQLARALYADSDCYILDEILSSVDPEIANYIFQHCIKGMMKGKTVILVTHQIQFISSADHVVVVDNGVLIQGTYLELLRMGIDFEMILKEKENRIEKQIVQLQEDEDYYEEVEILDFTMNNNNNNNNNNNNNNSNFNGNNKLKRSSISLPKGISIESIISKDFDQTTIEKAKLFVQEDRNKGDPGWIIYKKYIRMGSSISFFIFTCIIYLTSQIILLLSDYWLQSWASHDRLNVSEPTDVHYLLIYLAYIGGFVFTLGVRYLLIAKITFGSAETLHRSLLKSIIRAPLTFFEQNPVGRILNRFGKDISDIDILLLDCFSDVLYCGACLVTSIGIIIYISPYIAIPFVILIAINYIFQLFYNYSVLELKRIQSISRSPVYSLLSEVYNGLTTIRSFGQQERFFNMMKDNININLRVFFYNFAVSRWIGIRVEFLSAIVVLMSALFSIFNDNPGLSALGVTTALGITFNLNWFMRQFGELESRINSVERVQSYISIPKEKETNEDEFIQTGFIWPSRGEIEFKNVEIRYRPNSIATLRNFSMKINAQERIGIIGRSGSGKSTIGMSLFRMIECSSGSILIDGDDISQIDLKRLRSSIGIVPQDPFIFSGSIRLNLDPFDQFTDNEIWEALSKVKLKKMVSTMPMKLESLVQGGDGLTIGNKQLLCLCRAILRNSKIVLFDEATNSIDFQTTRLIKQTIEENFKDCTILTIAHNIDTILDSDKIAIIDEGELIEFDTPLNLIKDSTSRFSKLIKLNNNQKNKLN", "length": 1436 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VG9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSIIILSFILSIISFSNGTIVKCTSASCSSLNNNCVNHYCNPRAGCYGIDKCVRIDACHIVSCDLNNGSCINTKANCDDGDPCTDDFCHNGYGCFSLPNNKHPSVICQKNCNDNNPCTDDFCDFTNTCQHTLKNCEDNDFCTIDSCGPNGCVHTNISCDDNDPCTSDFCSIMYGCYHEQIECSIKVPCSTDIECNRYNLCETYTCDLISNICKYSTKFCNGFPCINNECMTGVIYN", "length": 237 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WA9-1", "protein_name": "Short-chain dehydrogenase/reductase family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKKNIFFITGCSGIGFGGLMVKKLLSRGDYVAATSRNKNKLIQDIGSNENDQFLPIEMNLADESNVKEAIEKCIEKFGRIDILISNAAMGILAPLEETTDKDARTLFDINFFGPLNLIRNSLPYLRNNQFLKNNNDNNNSKLNGPRIIIIDSICGYSSLFNGCSIYCSSKFALHAISETMSIELKPFNIHCCNIAPGYFQTSFLSSCLIPDTRIAEYKDTHSFLDEIVKLNGSRFLGDLSKAVDVIIEISLSYSPPNHVLVGSDAFELFDLKYKKLTNDILINKEICSNTDKN", "length": 295 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WC3-1", "protein_name": "Cln5-like protein 2", "gene_name": "cln5lb", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNKLIFIIICLGIVDKTISSDFKSYNDGIYSFTYDNICSFKNSIRDQDVYELYYVQAPLLYATYGNLLEKINAYHSGIVLYNKNNGPNITIDYYAIPSFEATLFPKSIIKDSQGNYNITWDTHGLIEVTNYINETYWNKRQLIMYDLSGIQIKQYLSWAPIYNKTHTFYNLFNIESDLSISNSSKIYKNSSTCDDFVWASFDVLYKLGGTIASVQSDPQRDDIKLFISSGEPKIVDYNDSIKRNQIASFFNELKDFANLGKNKTALEIFNELITFFNGYFYCYIDGEYYEMKLSKQNPISFTYLPSPIPIGKRNFNEIKKLGFCK", "length": 325 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WW7-1", "protein_name": "Probable serine/threonine-protein kinase DDB_G0279405", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGCIFTKPSPEQQKFDGEDYECENKKNLNLISYIRNLLFGNNSHQQLYNEIIPTTTSTTSTTTNSVYQNIGLDGYNNNNNNNNNNNNNNNIMNNYGYDDYGYSYEEDEDYYDEMPIPTIVAQPQPQPQPQPQPQPQPQQPIRIVSQNQQIPTTPPQQISQFNITGNKSPSSIGSRHRSKPKETLRAHKKRHKDGHKMVNEYVFVRKLGKGTFGKVKLAYHHDTHHLYAIKIFNKIRLKKQTMGIGRPNAFDDVLKEIAIMKKMNHINVVKLYEVINDPQEEYIYIVMEYIEGGSIMSANETSEDLARKYFRDIVFGLEYLHEQKVIHKDLKPENLLVNSEGVVKITDFGVSHIFDDDDVVRCSRGSPAFLAPELCRNESQPISGKGVDVWALGVSLYCLIFARTPFISKTNSLLDIYDQIVNHEPTYPREISNDLMDLFKRLLDKNPLTRIQIAEIKSHKWTTISGTWPMNELDHLILSVTDQEMIDAISTDHTIKPSDNTTTDEDDSDLSSSSGGESSGIIGSSNESKSMYNNVNSKQKIQNQNQNQNQNQNQNQNQNQNQNHNQNQNQNQNQNNNNNSLIEKSNISIPASSSSISNNDSCYENRNVYIKDEEMNMICNDSVIMDPIKELNKIDGLNYGCDFQIGKEYSDFQYNSGHFIYDLVDENESQISRESANDYYLPFKTNKYLNNKSIV", "length": 695 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WX7-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MARTDNVQLPLENTSIEFEEEIIDSQNDISQQKNYQDFLKNIPTDLNERKEYISSLKKLIKLEKRNHQQIQGEQPNQQEGLNSDRPPPNHHGDHHHSLPPPNHHGDHHHHSQPPPNHHGDHHHHSPPPPHHHGGHHHCPPPHHGGHHHCPPPPPHHHGGHHHHCPPPPHHHGGHHHHCPPPPPPHHHSHHHHCPPPPPPHHHGGHHHHTPPHPPPHHHGGHHHHCPPSPHHHGGHHHHSPPPPPPHHHGGHHHHCPPPPHDGNEYLPQSQTNIEQCICRLNRKKELLIAKIQSIDSIIYNLECLNKQNYQNNYLPSIQLQPTQQPQQPQQTSIKPQQMCQQFFIPQTPNFPQMNNSAPLMYVSQIPVQQSFNNN", "length": 374 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54Y59-1", "protein_name": "Small GTPase", "gene_name": "rsmH", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNIFLSKSKDVYRVTSHKKEVKICVLGDANVGKTNFINQFTKSSFNEEYTPTIESRQNKLYKFNRKQFQIQIYDTAGSKELNLFVSDSISQCEGFIIVFSLNDRNSILKIQHYKTLIKNIFKDVEMPIVLVGTKMDLKKEITISKNECKITSVNNNIPNLFYTSAKNKESIIPVFKKLVDLIISKEKKVKKETESNNIKINNQNKIKKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHVFKTRSNSTLRMKKYLKLF", "length": 272 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YJ4-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKVYQDEEFSFFEIGGKKIADLYVRDIITEIRKRGKEITGLGLKSKYELLCILVNRMKEENPSLNIPPKKRVLDFGSLSSTTSNGILQDSNKFFKKDNTHQHQQQQQQQQQQQQQQQQQQQQQQQQHSNNSDDDDDTHNYNDDSDESDDEYIITEEEEIELHKNLNLGDDENLLTLEIKLLESQLENKKFRKSLLLKDKKIKHLENIIQQQQQQLLEQQHQQQQQQQQQQQQQQQQQQRQEEEQQKEQQQKEEQEQEQSSLKNNLKFKDGANLFSIESISNLYNKILNEFNFKKIITEFGDSSLKIHEEFVKFIILKSINLNHNNNKNNNKNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNNLPNGDVNKNNNNNGEIIELVPPPKIDEFWKLMVLDTVGYQQFSNILGAKVNYDTDINPTRKGYQRLKDMKNLYFPPPPSTTELTTDEIWPNHYLLPIQPSPQKQHIQKQQLPSSSSSSSSSSSSSSSSQQHQQHQPQHKQQHQLQQIQEQQPQQQQHQQQQHQQPLQQQIQQQQQQQQQHQPQQQHQPQQQQQQQQPQQQQQQQQQQQQQQQQQQQQQQQQKKQQQQHQQQKNKENNKENNKENNKQNNKENNKLNDNNLNIEVHEDEGNRIINFLISPDTPLRNLFVAYAKEIGENFNSFKFYFGNELLCQNETPSQLLMRNGTKIQAFYLNKKEIKK", "length": 702 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YV1-1", "protein_name": "Rho GTPase-activating protein gacII", "gene_name": "gacII", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVRKLFNTSHKKELILDVDTTIVKIGTPKNVVLLTKWLDANGAIKEEGVFRVNGNTTTMEQIKKNFSQGKDDLTKYTSADIHSMAGCLKFILRELPEPIFTWDFYPIFIKIQCLQDESRKLFFLKMLIHGLPYTSRTLVFQLFGFLSKFSVHQDQNKMTPKNLATVFAPNVLRPKKEEDNFQLMNNQDSIGVIETLIEEFQYISNIQKNTLNSQEIKVKSVLPFDETTNAITQQSLVEDYLIAKANTPQESSSFKKNLPFKKGDIIKLLYIKNDGNFIGEINGITGNLSQTYVDIIDISELAEAFTLTPPPIPTLPIASTILHTPPTSSSSSSSSSSSSILLTDNQPKLCSSTPRINNSPSSFSPSLSSTTPQLLVQQSPRQSPRQIPSISLIVEPNNTNQPSFGHGTLQRTSTGYFSSKPLSISQPINMSKPTNMSPPTHHAMSMHNLPPSNTTRENHLPPLPTKPPPLTIPSSSSLPTTPIKQQPQQPIQQPLTPQNHHHHHHHNNLSSSVNTANTGNCANILSPNSDRYLSSRSQSSVHLSGSSSSSSSSSSSSSSSSSSSSSTSNRKFDFSLKSKSSKNSPSKNLPPQPTTTSTLTPPPPPTITTTTTTTTTTTTTTIATTPPPPSKPLPNIPVKDQQFNTLKRSTIEIPPPTITSTNINNNNNTINPRTLNYSFSSFSITYNNSQLGGQLSQEEPPGGVKSQSSYLDNNNLPSRNTNIPNLPPRPPPLNIPQQQQQYKPLPSPPQLQSPQSSLNQSLQIPLQQQQQVQQQKLTTHYILPPQNTNLSGKNLQRSSTSMLLNKLPPPPFSFNKN", "length": 817 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA1-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNLNITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSGSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA6-1", "protein_name": "Alpha/beta hydrolase fold-1 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKINQTPKKHKIIEPNRKGYSIVGKNTGKPNKIYFETFGNGPKKILFITGFLSSSKGWCKQIDYFTNKKDQYEICVFDNRGIGKSNIDSKYSYNFSTKSMAMDAIDLLEDTLKWDKVHICGLSMGGMASIHLSSIIPEKVQSLVIACVPNGYFLPFFSMGVFNYIRAFFFTFNEKKKARIFQSLMYSDNYLDEKTNGSDETRSEQMFKKNSTGFKDDGPSFLTILGHQIGYITNRFSKKSLEVIKKYSIPTIVINSKKDSLVTIDITKKQIVNPLKPLNFHVIEGGHLSQLENPTFFNKLVENHVDKHSNWDHSTFFQVEKQQFQRQSFMTQNILYSKNYLSSNTLSSSFLNCNTLRSFFNKIKV", "length": 366 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZT3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551H6-1", "protein_name": "t-SNARE coiled-coil homology domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MATRDITSSYILSRTECKNRAKIINSAININIKKSGSGYKRLEEENYQDIDIDNNNNNNNINNNNINNNDNDNDTTNNIKNSNNNNDIQLNILDTEINIEQLNSLPPWILKLNDIDENIKKIISLIEKFKKYLKEDIDKILAEDIEMESRIDCERSIELLTMETIRLFHKTFDMIKYLNKSNNSSQGENKMKKNTQRMKSAKLKALLITFKHIQRSYLALLKKVSSLQRSLSSSFLYRSGEYDVNNDNEDYGENSSISNSHYLQHHHNNNHHHEDDHDHEEDHEEIMDELNEMATTLIERQRVSQLIKETSHLIQDVGSMCVKKDSIFDRIDYNLAEGEELEFNGTILICDGITNGYERPENEKRKKLLLIFAVLIIVILFIFILKYVIEI", "length": 391 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551V5-1", "protein_name": "EGF-like domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKYLFRFFIFLFCITRINSQTGCFFRETGADYNIDSVFSVFYVDNLFNIFGMTFYMKTCTYVTCDPWRQTMICGNYNSTTFQLGPYQSQKVTLNKNGISIEYLSDKTPPNHPCPTITTTVKFICDKSVLSVPKSDYDYVGTCGVQIKLFAIDYCQTCSKCIASHGSCNSTSGWCTCDSYTMGLNCDQLKASISSVVAPTIDGGSVIISGDFSSIYSLGPSLVITIGSLVCSQVSFAASTTQISCTIGAGQGYQNLTISDGSGSTLQYKQFYYHYPCQEDCTPYGTCNDVIGKCTCNYKYSIGADCKTLNLQLTSVKPTLLDGGQAYLVGDFSNVTGLTLSVKIGIKECTDVNFNETTLQCTIGSGEGIKDIIITSDLLTYSKIGAYEYQYYTCPLGCLHGTCNKYNGLCVCNNGTYGDQCQYIECPLDCSTPNGVCDKDTGICDCDDKYSGEGCDFIKCPLDCSTPNGVCDGKTGICNCDEKHSGDSCQFLQCPLNCSNPNGICNRNTGICSCDSKYSGEGCDFIKCPTDCSTPNGTCDGKTGTCKCNNPYTGENCDEIAKCKQECSLKHGTCDSHTLDCICDTQTKGLSCEESRLLIESADPTSLDGGTTTITGYFGTTTSLLSIKIGDSQCTNIKVESDTKLKCDIGPGEGTHNVTVTDDDLSFTGVGMFQYVGQINKISKISGGAIAGIAAGCVVGVSVLGAGGYYQYRKNKKIELFMS", "length": 722 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q554Y8-1", "protein_name": "ADP-ribosylation factor-related", "gene_name": "arrB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGMGFSFIEKKDFKRFLILGIDNSGKKKIMYRLKFNKDIPTRPEKGFFVETFERRFKYNNEDVCGQNMIRPLWPNYYTDETNGLIFVVDSSDQERIEEVRLEIKKLDENIKIFKNHPFLIFANKQDLKNSLSIEQLIDKLELNKLSLNRKWHIQSSNAITGDGLEFGLNWLFSSSHNFT", "length": 179 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555E8-1", "protein_name": "Putative fatty acid elongase DDB_G0274669", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METVQSIITEWTDPKSWEKLVQHSFKDSNWKELIDPVNYKFNFGVTPFSQFQIIPIVLVIYLVTIFSIKFLMKNRKPFSLKFISILHNAILCIWSLIMCVGVLYEIIKRVSNEGPLFTVCEDPNGGFDKGVTYYWSYIFYISKFYELLDTVIIVLKKKPLIFLHVYHHCKTVWWKKYITMIQILQFVCLGIAGVLHVYTINTIGCFTHYPAFAAAYSINFSFLFLFSKFFVKSYTPKNSNSNTNIKSKKID", "length": 251 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555Q5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MRSIRIKKINFHIKQGEEQLKQELNNYCEETSLKYISARIKKRHNDFTINAVKDAQGRTINKQELIEEEYVKYYSNLYDYKEDDAPSHYEMLENWTVTRDSTWDNLENEFTTQEILEVIKQLNPHKSPGPDGIPNLFYITHKEKLAPILASAFNDTLRNPHLISKNYKEGLIITIPKKGDPELIKNRRPITLANCIYKIHSKLINNRIIPILTKVINHNQKGFVPGRFIIDNIISMNELINYCNDKRINGIITLYDFEKAFDSISHGSILRSLQHINIPTNIINLIMNLLTKSEARIEINGRTTIPFEIKRGVKQGDPLSPTLFVLVIEALARKILQDDRITGLPLNNSDHREKFQSFADDSASMVPDSQQLELVLQHFNSFCKATSSKLNIDKSSSILIGNPDNTNQRIPISTNPERYLGYFFTGKGITRKIPEILNTIRSSLVLWKTTDSTIKTKTNILKAFALSKLTYYSYVENFKEEELNQINKLVEWFLSAPNTKMLVDFKITPKLSPTAKKDQEVNADYANHRFHKEYFEWNYKAIDYDLTRSFAYRNLMALILHNIWIWICNQIYSEDPLTDESLSYSSLLKKWHKLATLEYIKKAKDLKNLSAKDHNNFKDPKILLTSTIKLRKTTANYYCIPESSLPNIISFDQFI", "length": 655 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556H5-1", "protein_name": "Cofilin-3", "gene_name": "cofD-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTTPKPTIAKISPECQTHFQDIKFRNKYQGILLKVNEESNMVVDKTLVAEGEFSELAQSLPTDQCRIIIYRYKSGEGSKLFFIYWGPDSAPQQDKLIYGNAKVTLAITLKGIDHKISASNLKEISEQVFIDRITPKTA", "length": 138 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556J5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWNHNLCHAINLDRQFDHINNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKNNNNNSYDYSFSVHSSQQYSRHYPNSCNNEQTKPKDYYDHASRSQHDYHANGSNNGNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNNNNCDSNYNSNNNNSNNISIANIKYQQDQHYQHSDTYTSHQYNSFNDNNNNNNNNNNNNNNNNNINNDNDNNGYNQYDESEEDEEEQDDYDEFDIQDSASSYNDNCGVLNSNTYIYDYQSPQQPLYSNEYQNNNHQPQQTDSYNYNNTNNDNNSYNINNNNNNNSYNNNNNYNNSNNNNNIGNIDSNTNNNNYNYNYSNNGDVYNGYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNMNNMNNMNNNIITSNREQFYSNNNHNNINQYQYQSQQQQTQQQQQQTQQQQQQTQQQQQTQQQQTQQQQQYLTQYYQQELYSQSYKCRPYYQNSFVISKC", "length": 480 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556P1-1", "protein_name": "CWH43-like N-terminal domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISSSLKPSVLLWILAILIPSTLITTYTLTVLLFHGIRRTVPYISDTIDFSPESCIGTFFISISAFLVFIVVFVKHFLLQNNINQNFNIDIILNENENEKKKNRAKMLNRISTFLGLICGVCIHGVSSFQYHNTGLVHSIFAASFFFTGFIYIFTQTYLDHKFSKLPKRILILRRVISLTTSVFIGYIILQFFIDNLAPILKIISALSIFFYLISFFYEFSKITINFQINTISQIEHQKEYNENSALLISQ", "length": 251 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556R5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLINAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYLKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKPTLQPSTICADTGVYSESNFTKTIQR", "length": 861 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556X2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557C9-1", "protein_name": "Homeobox protein 5", "gene_name": "hbx5-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METIVNNQNNGQQNTVPTQSFSSSVYMNYDFFDSQQLQQPQHQPQHYQQQDSFVSPNLDNNNPQIHVQSNNYNQNGFVGYNNSNNNNNNNQHMNNQYSNSFHNNNSSGFMAFQNNSSNFNNQNNNNSNNNNNNNNINSYDYNNSNNNNYNNNNNTHSNNSNNNNNNNNSNYWNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNHHHHHHQQQSQPTSPYNNPIQHNPNDMKFNGQHNPFNGNQMVMDNNNNNNNNNNSNVFNSNSNSNVFNSNSGSFLQINNNNGSFSSYNNNNNNNNNNNSNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNQFSQSYDSTLGNNRFSSMMGQPIQQQQSPPQQQQQQSFIQSSPQAIPASNCNGNGSTSSSTSPLSPTLIGSAPGTPTSMLATTLFGFNLSSSPTSSPSSPVKKGKSQSALALSSSGGSGGSSGRKKPQKHDSMSSITNTNLKSTQASTLKESKRSNSSPNLKKQMQLQQLQQQQKLNENGTLIPPLPFASISENITNNNNNNNNNNNNNNNNNNNNNITNNPLSGSMEFPNSNNINQSSDSINGEFNIGQPESPKMYNSSPSPPPNATSTTKGGKKSKKSLHISTTQQSPSLNGSTGGSMLTPTMSGLSLSGGGSGGGFSPLISPTGTTSNKDLQSSPSPSPLLKSMSMGKLDLQDSIDSMSSPLSPNSSLSSSNGLLPPPPNSNNMNSSGGIPTPSTPTSPPPLTHHINIFSNLEFVKQLKDHLLPNDFKPEEHALERNLLRFQQFVKTLAEPLQRDVVTSMFELSVDAQLQYGSNLDNDNLSALMLFRRKILNFNLFRMMMLNDPNSFIPLPSPFPIQTTTISSNGTIVNPTNVNNNNINNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTSANTVQSGTTSNSNLVFQQTSNSNTLSPSQQQQQQTQQQQSINGSSTGSLSDAQYQDLGIHLDTSSANSGCGINVSIGSSIGGGGGGSSLNGSNLNGSSSISGSISGGSSNGGGQFIMSPQFSLDGAYQQQQPSSYNINNEMELAEKDEDEIFNNNNKDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSSINSNINNVNNCNINNNSNSNNGSINSPRPSTPTTLNSSGKRSKKIYRGDSFGAGNDISTGLMASSDQIIPPPQQQQHQQLVNNNNNNMNNSENNILLADSNKGLSVSLGSLPTNTPSSMEIEQQQQQQQQQQQQQQQQHLNQQQILHQQLHHHLSSSLGGAQFTNIQQQQQQQSGNIFYNSPYNSSQVYMNPYGTSITNTSLAGPSTTSSAMQHMITNMTSSNIIVNNQNNNNNDQNNNNNNNNNNNSTTNSNVNNNNNTTNTPSSPPQPNNCTPTQTSIITSNGVVVPSLQMRGTITNPPPVLPTPDTLVLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQETPHTPTSNSISSPRSSPVHQQSPSNTNTTTTSTTTIRHSAVTQLSFAGLHNQQVSPISPRSPRSPHGTSGDYNDGSQSPSSRRKNRFTDFQIKRMNDCFENLDKNNNGKFTSEEICQIATELGLTDQQVRVFFQNKRARSRPSPRGQPTNPLTSSTNNGNNSNLALQHLQQQHLQQVQQQQQQLLQLQQQQQQQQQQLHQQSANTTPQLNSMNPNSINYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNITTINE", "length": 1723 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557D0-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTGSNNLNSLNNNNNNKISLQETIQDIIKCSICLNSPKNPRFCPRCSALFCLECIDRWIISNPTCPACRDTLTSDNLNSNLIVSNILNELVKSEQEEYTSSDICNYHGYERLYYCSTCQEPICSDCALFKHKDHKIEKLSINFNKNLEILKIEEEALKKRQEELIELNSFLELDAETLLKNKSQIEKEISKVVITMKARLKYDFERRYNTILESQEKINNELTHLDFIYNDLLNHYKKSPSSFVLTSQQFIGVLQSVHKNSIMDIYTPINTDLTSELIPPFENRLLKFENFTTGDCLFSSRIAFYGMTWEIKCGIEEDNCFLNLKVLECNSDGKYFYMFTIVNQKTNVNKLIEFDLPFQAGETFYIPNFSSKQTLIDEGFILPENDILLLQFSFRPQNYFCYSNDLKRYIDILEYRHRGYFGEEDEDDGTIETTVTKLPNDKSTILGSDNYNDNYNDDGIGDLDEDEEEEEDDEDDDDNLDDHLQYDNDDDEDEEEDDEEQNEEDNDEEGTNIPTSEYEDLDTSSASVISNINRRDRFKNNNINNNNQFVNSNNNNNKYNTTNSNNSIVGSSRYINNNNNNNNNNNNNNNNNNNNNNNNNNNNNYILNRSYSTNKIYNFYQDEEEEEEDDDSNIDDQDEDEEEEDSEEESSLSSSDLQDLDSSGDQSSLEFSFSKYTNNYYSNNNNNYNSGGGGGVGGAGDNNKIECIRRDFNNLLKRINFTNSQLTNLKPGVPKDGDLLNDDENDKKCNIPLNEDEEEDEDEEDDVNKNKTTSTTTTTTTATTTNEVVTINPNTISNNSQDEEEVKSDIVKLLENGIANMLNNSNSSNRSSNNLKQQQQQQQQLQKDDQKQKDEQQNKSNTGCDIDQLNILSKLSIKESCDSIKNNDNDSLGNSTNNNNNNNLNNNNNNNNNNNNNNNNNNNNNNSNNNNLQSFLQSNENTENETDFNDNNTNPETNTETENEYLTSSNMNLDGGESEFDSNKSYEGSSTDENFNSDEDYQDEDNFNQDATGSESANNDDYLDDNEREGSDSIENYDEDIEKVLTSHNIITTPSIPPSQQPQPQLQTQPQTQPQSQPQSQPQLQPQSQPQPQTQPQLQPQLQPQLQPQLQPQLQPQLQPQLQPQTQPQQQKKYDDLSENQIQTENRNKKIKEEINNKTNNDNNNELGKSSKSNTSSSSSSSSSSSSSYSESESSESDSNNEYDNEDEDDIVNQVSNFNFNFNDASNFKNFSFRPKFPSDENDNDDNDDDYEINIDLKNIQKISPILRAIENGESNINHYQSPVSLSSSSSVSSFSGSGNSVPITATTTTTTTTTTTTTTTTDDDSGINMPISPLSASPPSPPPQNEPQINNETNDNDVKLPQI", "length": 1364 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559A9-1", "protein_name": "Probable polyketide synthase 13", "gene_name": "pks13", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENFKYRNNENDVAIIGIGFRLPGCKNFTPNELWNNLKNGFNGVVELSNRWSDNFYTMGKVSSAYAGLLPFDELKSFDPLFFGINPTEVPTIDPQQRILLKCTWEAFEDAGIDPIKIRGSNTSVFIGTSTNDYQRIIREKDQTITNAFGTSLHATSNRISYCFDFRGPSMTLDTACSSSLNCVKLGYQSIRDGTSNLSIAGGVNLIIDPYFTASISDLNILSKTGSCKTFDASADGFARAEGSGIIVMKNLKQAMIDGDKIYCVIKGASSNVDGGGLQDKSNFYAPSSLSQCNNIKMALKSTNGTVEPKDISYFECHGTGTPTGDPIETRGISMVFNDESRSKENPLLIGSIKSNIGHLEAGSGIASLIKCCLMFKNKCFAPNINFKVPNPKIKFEEWNLKVVTEPIQFTKSNTCIGLSNFGVTGSNCCLILSQFNNNNNDNQIVGNNNNIKSNKEYLIPFSSNSVKSLENYQQLLIKNGENEFKFLEFIKHQIFTKPTSLYQRSVVIASSWDQFNNAKIMKTSNSKSSNISIERNNPITVFVFCGQGSQYDRMGLELYNNDFIFKESMDLLDNKLSKYYGYSVLEKLRNCDSKSIQHPMIAQPVMCMFNISLFELYKHWGIEVSFIIGHSLGEIPAAYCSGMINIDTLCYLIYHRSIAQTKTHTNGRMLSINISADEYFSQYSKQYPDIEIACFNSPTSIVIAGNEQKLNEISEILKEKGIFSAMLASLSSFHTSSQNKVKEDIVNKQFDSKQSEIPIFSTVTTNLFDSVTSPFNSSYVFNNIVSPVKFSQTISNLYKHIESNQLGNDIVFIELAPHPTLQFYLKQMIPKPTNDDNSIEFKVSVYSALNKKNNDIEEIQRTISQLYCDNGYNVNFKCQFQHDDTHGSINSNINQLSNISLPHYQWDDEKYWKEDPSISKLIVNGPQTDNLGYLNENSPNSKSYETFIDIKRPPFQYLKGHMVKGKYYFPGCGYIDNLLKIYKSQDLTINQMGFKSPLIFIEGVNQALQTNIFKKSTSNTTTNNNDEFRVEYHFNDQKTNRWILSSFGDFQLSNHSSNSDNLEKINIKQLIQNQCNLTKLSRDELYSHIKSKTGLTYNGVFQGVNKCYLGENCSLSEVSLELKREPSSFFNTAVLDTCLHGMLCLLEEQSQLVFDRIEGFKYHSSNVPTSEEEMKIHSNIYVYSTINPSRIGDSYSASIVIMMEDGTVLIEIENAVCTSLTPIKESISVKYPTNQLFSMYLQSKDSPIPSPLNFKSLYNQNQQQLKIDKQFTDWMQKCEKFISNQFFKNIEKRNPEINLEILNSKTIIELKSKYCQNLKNERLFQFVFETIKQLGVNAYDDDDDLTIDSSEDRKSIYEILIKSTKVIPKLLFPLEDEDLTIDSPQSLFENGLLDRFYNNPNLMTNQCQLIAQIIKESLKPLLNKKMVFRILEMGGGTCSLSVVVLNLINQLLLENPSFEIDIEYTWSDISPSFISAAKEKLSHIDKRINILYRSIDIEQPFIEKQDLSPSYYDFVIMSNVLHVVKKLSPSLDEIHKILTPNGHLLFVEIPYKELISDSIFGAFNQWWAFEDTDIRKDRCSIPPNQWIQVLSNHNYKDTIVSDNKECTWCCFVIHSQKPSLLELSKKIECNQYDNIIVFGNENSQDNFTKSIKLSYNNNIIKWVSNIVEIKKFIKLNIITNNSIIYFTKGIEELTIDNFKLINFQYIQINQLLLKYESKCKNVLVTRDCDGSNYLASSLIGAARYFDEYRQLELFTLDFDNDTIQSCDECSSSSCSNLIKLIEPLIDPKINIQREFLIRNNRVYFERAKLETNLKKSFKSESFENSNKLISTLNFNLDYQLQSKPFKQLLQNEIEVEIKATGINYRDYLVFTGSLPIEKTNHNGISNQPEFGVDFSGIVTKVGGGGGNGEFKVGDRVYGIGHNTTSSHITIDSRYASLIPNSLDYIEASSITSSYILSLYGIFDIGNLDIQDNESILIHSGTGGIGLSALNSLRWKGHKSHLFVTVSSKEKEQYLRDNYGSFITGIYSNKDKNYPKLIKEKLNQLGSNKQGVDLILSSLPNGDDNLNFKCLAKNGRIIDLSNNIDLFNISKSKIKKLLNTINDGFESGELQVIPIIEFSNSNIRDAIEFINERQHIGKIVISHDDSNLLIDLINKHSNQPNYSILKSDYQISQSNLGKNILITGQSGIVLEILKWIIKFSNSIENVIILSKSLMKWELELLIGKTMKKANNKIKFHFKSVDVSDSIQVENSINQILNDNPNIVNIDSIFHFAFTQITKKVEEIDMESLNVSHNAKTIGAINLHNQSINRNWRLNNFVMASSATSIIGSTDQCSYVCANTVLDSLSKYRKSIGLPSICTNYGAIESAGFVSKNESVAAMFNGIGIISISTDLILGTLDLQIQNQQSSTNLMLSDFNFLNFVNNNLQLSLISKFDFQTNLAKNQVNEKLQNQTQNQNLQIQSPSSTTDCQTIIKDSFLHKISEVLSIDISKLNLDLKLLDYGADSLAIVQIKNWIDMEVSPNLIVIQQLQTFTITSSIQYTINSFLKKKVQSQE", "length": 2551 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559I8-1", "protein_name": "Uncharacterized protein DDB_G0272530", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIKLILVLIVFLTIVNVNNSIDLCLSNPKKALVNQACKYSTDCEYPLFCGSGNGYGKNATCSKNIETGGSCESNNQCTPCNVCFNAKCKVKLYLGDACDENKSYCSSSVCIKGKCSIQGDVCTANNQCKFNNYCKSGKCVPLEKEGSSCDKDSSCSLTNACVGGKCVTKYQKPLGAVCNSSNECQVFSGHVCGANGKCSVYNQLLSKCKENSDCGPNGMCMCKSETENVCVDLSVGALKNDKCPSLLSSFSSCMTRERCTENTPTGCPKCYPIFMCYQYSCFYMNQFIRSTQNYYKSFCS", "length": 301 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559Z2-1", "protein_name": "E2F/DP family winged-helix DNA-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNISLLLNNRNRNRNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNGNANESASLNNGSEEIRSNPSSNFSSPIQSSLSSSSSSLSSNQATTPKKRSHAHKNSLKCQSPQMSPQMSPQMSPQMSPPLQYFPQHQMQHLSQYQLDHLQQQQQLIQQEQQEKQQQQQQHQHQQQQQEQQKQQQKQQQRLSPQPRSSQPRSSPPRSSPQRSPQLNQQEGHINSVQTYSGNNINDKNQNNTNNNNNNMSNNNNFHDDNNCNVNYNNIRNNSNNNNNNNTNNNNNNNNNNNNNNNNNNNNINNNNNNNNNSNNNNWNNNYCNNSFADETNKNNTYGMEYINISEENQYNNNNNNNNSNNNNNYNNYNNYNNNNNNNNNNNNSNNSNSNNNNNNNNNNNNNNNNNRNNIINSNINNSNNNNYNDNGYNNNSNINSNDSYNNNNNNNNNFNNNNFNNNNNNNNNNNNNNNNNNNNNKNNNNSNSYNNNNNNYNNNNNNFHNNNNNSAHNNNNNNYNNNNNNNYYNSNNNNNFHNNNNNNNNNGNNFNNNNNNNGNNGNMFTNVNSIDNVNRNNYNNYNGNNNYNGNNSNNNNNSNNEVSQITTTSLPVKKTKVFKAPREKKFKRGPDQDIREIKPATALLKQYFIGNSITEFNAERVGSILKINHEKLKDILDIMECASLVINNHSNNYVWLGLDNPGFLKLVFNVFHCSSNLVTKEPEFACLKCKENAYRCPTSVDLPKDTRLGSTVCQFMKLLLSKRIRTNPVNDFLTIYQVCFNFNFCSEGRCPEEDFKYLRNTAKVKRCYDVANVFNGLNILEKVGKSKIHSYQWCGDFTIQDCENGCPFGHPLLTPGTAYTTNPSPNPFNQFSNAYISSSAQSSLSNSPFIQGGFHGNNNNSNNNNINGNNINGNNNYGYNNNNNYNNYNSNNSNGFNNGNSFFQQQQPLVNSGVSMVRNNNYSYSP", "length": 964 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55A39-1", "protein_name": "Transcription initiation factor TFIID subunit", "gene_name": "taf9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSSNETLPNSEQENNSKTDTKNDNKNIGDENKIIDTDKDMKDNDTINGKENGNININSNNNNNNNIDTDKEMKETSSIEEDDNNNNKNQNNNNNNNIKEENDNLTELKNNNNKENKENKEETIKEDKEKENNKEPVKNKEETNNINNNNNKNNNSDNINNNNNNNSKETLNKISSMSKVSLTSESSEINGQVNTGVVNNNTNIDITQTNLDEPRDSRVIKSILKTMGIQAHEPRVVNQLLEFMYKYVFEVLQDAMIYGEHSGKTDIDVSDVRLSIQSRVNYQISTPPPRELLLSIAEEKNKTPLPPIPNRYGVFLPPDEYCLTNPNYQANPTKPVFQPVQPLVGNTSRGNYNKKQSDKQVSIKFNSMSNNSTTTTTTTPPTIGSQNGTTIVSPPNLGSLGTTTTTTTTTITPPPPILPLSSNIKPPTLSIPSSITSPPTVTTKNTSTPIIGLGSTTVAPPKTSSSSSTIAPPVLSLPTSITSPPTVTASSTTTTTTAPTTTSPTIPSLSSPTTAATTITVKKEDVKMDDFDDFDGQMKDDITPSSTPQQPSQPTESETTTTATATTTPAVTTTTIPPTTTSTTPPTTATTSTTPPPSTTTTSTPPTTSTTPPPQIKEEK", "length": 619 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55B17-1", "protein_name": "Amine oxidase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKKILLIFALFILVNINFASSEFKKNETESANLKSLYASYLMKNNNNTKYNNNDNSNNTNIYNDSVTKNKSKNKNELTVGIIGGGIAGLYAGMLFIKSMIFDDLGIDYTILEANKERVGGRVYTHKFDDHKYSYTDLGAMRIPLTPLMDRIVSNQNYSLFSKLAKGGYQIPTVPFLISVNNEISYYNGIRVLKGSPVLNPSDPFNYSDSNNGGPGKGIPDEYANRTVDSLILPVFYQFINNLTVDFYNGFKQMLKYDSYSARDYLKTFHNYPNSVIEYIENLSTISGRLDQTSITELLMSVFDFSGEKFVCVEGGTGLIVKSMSQIIKKKVEMGSFVTKISKSFDKKNNEIDGLNVEVVRDSNFGGSDTEILKFKHVISTTTLPALQRIDTSDLKLPLKLKVAIRSLKYTGAIKLAINFKYRWWEDSEFMSGKPIRGGSSNTDLLLRQVVYPSYGINNGTKGVSGVLLASYSGGLESIRISSMIGKKDKERKLLNIVLRDLAEIHNVDLKKLKNLYKDHFFQSWDNDEFSSGAFALFSTSQYTELFPSTGQSHVDGRFHLSGELTSVHHAWMIGGLNSAYRSVDLILKNEGFEDLRIKLRNNWGTIEQAEYPSLDWYKYDSDINHYKLY", "length": 630 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55BT6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLLYIVVFLLFAIKLCCSEYCGETYCVENRNCYSFIGCRNSTCLYETIDLDDEVDCTVDTCSDRYGVKNTPNNSLCPPENLCDMFLCDTQSGCVAIPKVNCPAPNPCQIPLGCNRETGICEYDEIDCHDDNECTNDYCDPILGECVHFSNDTICSNKASNFSTCVLSGVCGEFGCKYVEDNCNDGNPCTDDYCDFKNGCVSQKNDWNCDSLSACSEGICTDNGCVQQEVDCDDDNPCSEDFCHPLFGCGSILNDTICTNGNKCVNSTCTEDGCSLPVPIVCQDGNPCSDDTCNPSTGCQFTLNNSNCNDGKKCTIDQCGLNGCTHTNITCPPKRVVDIILIGLICRNHYCDQSTGNCVPDMNSVSLLCI", "length": 370 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55C69-1", "protein_name": "Chromo domain-containing protein", "gene_name": "hcpC", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGKTNKKKIEEESEEEEAGDVFEVEKILDKRVQHGRIQYNIRWKGFSADYDTWEDEANVVGCPELVREFESSRIKEKKKNRKRKNVIIDEDPTEEISSSLSSILSSPQPQPPPPLQLTNHSPASSELAITTNTFLISNCTSTSNKTKISIENEEIIKNDHARYGVPYVEGIGFENGDCVDEIVGCKPFGENNLLYFFIRWRGKEKLSWVSNESIKQKEPLQLIEFYESRLKFGYKGEEN", "length": 239 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKNNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH7-1", "protein_name": "SsDNA-binding transcriptional regulator", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIFKITRTKRRWTKNQKKILVMKVVEKKVVVKKSKTPNTSPSSSSSSSSSSSSSSSSSSTNDKSFNLSDKRKISYSNFKGLERIDIREFFEDKSGELKPSSKGISLTREQLVVILENGDTIKDWIKESK", "length": 129 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CJ7-1", "protein_name": "diaminopimelate epimerase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEPSIDNKPSFRINFTKMHGAGNDFVVFEKNKVERLNGDKSTVTFEEIVGFTTKIAHRKLGIGFDQLIVIDDNPIDKNAAYGMDVINCDGNIEVMCGNGVRCFSKYIVDNKVLSKNLKEQLNFDGDDDIEQIIETKSGIVKTYPLLKHHLNNKDNDVIMVKVNMGTPKVSRFINEIDRHIPKVLTNQSPIESYMYTIDIGLPYCSKLECVYVTVGGNQCVVFIDRNIELGYLDSSYGDHTKFSTIDFKEISDIIQSNVNGFDDIPNVEFVIQSPQDKLENKVISRVVERGNGETLACGTGACGVAISSILKGYCNENTEITVEMPGGKLLIQWNPNNEIFKTGPATSVFKSQILI", "length": 355 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CV8-1", "protein_name": "Lipocalin/cytosolic fatty-acid binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MELLVGGTILGALTYAYSSLKRTIPEGAHACSPFYPEKYVGKWYEIARLDFYYERDMNNVSAEYTLNKDGTISVINSGYNYVEKKRESVNGKALFVHGSDEAMLKVSFFGPFYAGYNVIAIDPDYKYALVAGRSLDYLWILSRETSIPDHIKKQYLELAESIGYNTSKLIWTEHDNINNKKD", "length": 182 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D49-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D57-1", "protein_name": "J domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIQVKNKIKIISILITLFILTINQVVECKSSLYYSILNDYEKGIDYYKILNVTKDSTYSEIKKSFRKLSLKHHPDRNVEKSSHSLYILLNQAHSVLTTDETRKEYDELLVNGIPWHENYYGKYAYRYTGISHDLRHVLLGLIIVITIGKFVYQYNKHHSMIKRAKQTDQYKKRLAQLDGDEDEIQLVIQGADKPTISSLFIIQLFFIFPFKILKSIYTFIFINKFKFIQKTDEEKEEEYRLKMGYTKEDWEYHKKKSIERMEKLKQSGKYKKYLRSKNK", "length": 279 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E25-1", "protein_name": "DRBM domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKSHTSEKVQLNEFLQKKKQPIPIYHTESKGSEHNKDFKSIVVVNGKQIESDWKKSKKESEKDCAKNILEFIETLDGYPIYFTPFSKDPPQNNKKIYDEKLQAVYNSVSSGIEGLNNNSFFTKIENNNNNSSSNNNNNLDHNHSNDSSHTSTDNNDNNSNNHNNNNNNQINIDLTMENVNISQSKTITNEGTLNNDNDNNNNSIQQQQHQPQPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQCFDKDKTNLKKKKKIPFSYNTDLIEHIDLFKRQDFPQTYPSRTTYTDTGHTQQLQKQVFLLTEKIGLMELFYKKQIRVILKSHHNLETELSALKSFVEDCSVTPIEGLELYSIPVPLNPNAKPSAGTTPVLSKSETQNEIIQPTKPPTKPPASCLIKKKIPNVNMKATNKTTTTTSTSTSNSSTTIKTTDSFKNTTNNQHPNTLKPMVSKINQQTSDFIFPLPKPIIRRNPIGNGNLEKKIEKKNSKPNTIVLGVDTQSQSKTKITPSPTTPPPETTPTTPTTTATPTTPTTPTTPTTTATPPPTTTATPPPTTTATPPPTATTPPPTTATTTPPPPPIIATTKTTATATATTIPIDLNEIQIPIRSPQDLTVNQSMISTAMMIASAAQRNPKLTMKLKRKLEESPTLMSKLQKIQFEKEEEILCSQDLHSPIMSPQSPTHQPKTLEPLSPTKKSTQKSPPPTSPSPIVTRARASSNLLPIQNLISKK", "length": 733 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E47-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E48-1", "protein_name": "thioredoxin-dependent peroxiredoxin", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKLKVGNIAPDFEAKNYLGQIVTLKEFKEKSQPIVLYFYPKDNSPECQKSCEFRDKYQKSIEAGAEVIGVSSDGEDSHKSFVSKYSLPFTLLTDKHSKLAKLYGVNGILLPGRKTFIIDKHGFMAVFMMVYSVQLLMSMNL", "length": 142 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55ED8-1", "protein_name": "Decapping nuclease", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQTLNVIGLINFIKKQRSFNKSPITITKPLEITRFSYEGNQLFPAKLKKFKNPTIDSDLLVGFQGPDSIESDSQTPLSLVLNKLIETKHDVSKSNFISFRNSFRKLFESMYDSEKWNIQVQRINSTIHLGMDNPTQDFHQLKNFHLKSMYSGNYFEKISTIDNNNNPNDNKHKYCSIIQSKLFNNNFILACEIDCWKKSIQNNNNNQNNNNNENNNNDDDDENYNIDDYVELKTSRDIEDSKANYQFRSKKLIRIWFQAYIAGVSKIFLGIRNDDFFLKKCLNFNTHDLPNQAINWNKDEMLIYGNEILEFIKNNTCSGKSYTLSFNYPIISLVESDSINIINDQYLQYYLNIPKNFENNYNQNNNQNNNNNNNNENNSDDTKNNNIQNNNENNNIQNNNENNNQNNNEKNQKRNFGEEKEIKGDENEERLSKKQKKLE", "length": 440 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55EZ2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55F94-1", "protein_name": "Dynamin-like protein A", "gene_name": "dlpA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSVFKKKDKSDDKKKKHDEETPQGTFQPASQSTSNTNLNSLASSVNNGASVGSTNGSTPNNSNGSTPTYNHNNSAEELEKQKKEEDEKRKKSELEAAAAVVAKKKEDEEKQRKEQVELERKRRDEEIRRTNAAAANAANKELNEQVEISSLEQMGKLDPSSTIHDMFSFFPNEVYNSYEKLQYFSRDLNTAVSHPEIVFVGPRSSGKSSLIEAFIGRALNIVGGGNIVGVGGSNANGCSKRVLYLQFTNNIDFEVPKVTIKKDNTIKEFDHDIIVSIEQLNENLAKRNQLTNDYIEEPIYVSIESRTTLNLTLIDSPGLLFDQSQAESNKIESIVSSLLRPSHRLIIAVESCSQDWKSMSMGQYLKKIDPELSRSTFVFTKFHHTVRGFSSTRDINKYLSGTVPDIKGFFVTLPNHQVRASYSEANRFQEKIYQAHKRDMHALEQLQYDKRYERTIGVAPLRRYILNIVWKSYQDTIPRILKHLRSKRQTAEATLNELQKQSSSLDSTKLRSIASNYTVTFLQITEKLLSGTSEGNPSANGQTLDEEKSQQGDCGEWVDAYKEAIYIDPEEWNIPYWSSKLYGGQQLERLMAEFKAVCDNSKISEVKMDDIATASGINKLNNIPNYAWAASDLTSLISRDTFVPLIEQLCERAMYIMKRLTDIADKVIDSRRKSRCIGSSPFGGNGLNNINSGGNNGININDRLSNTDMDSLDQYPFFTHHVKNLYYDFVHRAAKGCKEKCMDEFYSSRTIYWELTEHPDSSLPSIRNDHHETKTAVCQLATKLFDSIRQRITKNVLLKLYNFFLVPMQTDLWNEIQAQITCLSNEQLEQLFEVQATREQLKQEEKKQQQILEKYSQIDEQFLKAASLFCRPLSNPTPSA", "length": 880 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55FX4-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDINSNHIKKINDFKDKGNKEFNKEKNKDKLNKRAITYFQLGIKYFNDEKHKIEINDQINKLISILYSNLSLMYLKGDEIILSLEASNKSIEFNNQNSKAFYYQSICKSYLCDYKGSMESIDKAISISKQDEKVVQQRNRLIEITNNKVKEDVYFENVLKNQKLENVAYENSIEKGRYLISKRLIKRGEEILRIAPFSFSLNGKYVSKFCGVCYQKKSIDNLLKCKDCDDFAICKECKAPNEPLSKYHPNDLCVLYKLNNEYYKMNNFEIANEDNKERGLTDERRLYINTIYNIFKNKTNNKAVVEVDNAISSSVIDVLNLSKKLLNHTNESQRAYSDSTKMKTDILELIFKSFYGANTLKKDEISNIIRIVDCNSHGYSDVISQKKKASGLYPFSCYTNHSCIPNSDYFIDKHGVMVLYASSDIQESEAITISYIYFLNRVEKRRKDLLNGHNFFCTCDQCSFQSSLTEEVCDKCNEIIPSTIGNSNLVYKEPKSLKETGFNYICPKGHTKSSLVYDIDNDQLYPTIAENYSKCKDLRNFRKINIFKEMLENRDFVKKLTPREFEVTPLAKYIANPKKSNSMLFEELINLVRGSVECGLTKSIEESNYSTYLVYDYYDLYKSLLLESKPQILKLNSIRDIIIKLLTPMVYNQNKPRIDKKLNKHLSNKINLKKNK", "length": 676 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55G93-1", "protein_name": "Tubulin-specific chaperone D", "gene_name": "tbcd", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENSEDISLNSSEKSIESSVVNLEDQQQSQQQTQQQTCQKTFVQEAPELTILIDKLIQLKHSNKDELISNTTRIIYIIDQYLEQPTLLDIHLNDIIQPLINFIKSNYINNSNNNNTTTTTTTIMTETEIVIKKLSIKNSFRIIYVLSKVRGFKTIVKLFQHEAIDLLPVLDQLEISYHQWVNINKQRDRLNEISVSYSSGINLKNYIKPEEESEQEVVDENNNNINNNHNIDDEYNENIISWEEVYVLALWVSLLVIIPFKFSSLDSASSGTASAAGDGGDGDGDGQLKSISSRILKLGKLALSDVSKIRDSFSELLSKLLNRPDMKFEQKQFIKWCTNSIQLISNNNNNNNQNNSSNNNILLIIGIYSTLATMFKKGNRLDFLPIDMNLYEKIMEANKYLSLSGSERITKKIFLKLLQRIAIIMLPPVSASWRYQKIIKPLLLKGELIKQINNNNNNNNNENNNEEGEEEEEEIPEEIDEILEEIMKSLKDKDTIIRWTSAKAIGRIVNLLPKDMGDQVIGLVIDQMFEKNEFIDADPSAWHGGCLALAELARRGLLLPERLDVVVPLVIRALFFDIIKGTYSIGSHVRDSACYLCWALARTYHNSILSPYLLPICRNLVVVSLYDREINCRKSASAAFQEMVGRHQGLVPNGIEIVTSADFFTVGNKNNSFTSLTTFIGKFQIDYYPIVIKHLATIKIYNWDLEIRQLASKSIHLLTNINPNDIVSNYLPLIIPNTQSDLVHVKHGASLAISEILISLFENNNINLLSDNLKMMILMTIKNTKNEKLFKGKGGVLIRIGMCKIIYSICLVEFSLDKNLSEIKKPTESTSTNGNEDRAAALKLKIAMLKAKTASQINKPIITPPSSKSTTNNNNNNNNNNLNDNEIAFNIILGYLNENLNHPNEEVQKEASKAFELLFSKYISSNEKISLLLELIDSHCKTLKFDINRSARRGSSLLLGSLPFNSANLSYDLLSKVVNELILSIFQDDPKFKDIETRVNSISSLYKIGIYILNLIFKNQENEQKEEEDFKKSKNYNLFIKIWNCLGLATNDYSIDKRGDIGSWVRELSCKVLFDFIKFIITNQNSSTTTTTASTTDLSIENLINEKMITEFICKLFQLSGEKLDKIRDVACKIIHELLWIENPSSINNIPHKEELKKIIVKDQDVHFNWFRTEESLPLICKVLKFNCYLYPLLFGLFSSLGGTSKYLINDSIQSIKQYFSSFDNDEKERFEKIISFSKAILEITNNTTQRMIQPTFRSIYNLLSTHIFDFLIINNLNEQSIFETILFNCYQIIESNQDDIYLLLNSIELFSYFFIQFENNNNEYIKDYSLKALLLLLSNLKYPKVRKLASDQLKKSTRLFINNNGDDETPSLIKSLIFNTKWDDSVDLIIEPLKSLLLLLNQKHLLELLSENPTKKPIPLAPPITSIEELKDKIQNPHKQSDDNNNNNNGELINNNTENNNNNNFDDNLPEDSQDLMEI", "length": 1480 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GP8-1", "protein_name": "Rho GTPase-activating protein gacO", "gene_name": "gacO", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSKLPPPPVQSSPQGFQLPSLHSVQLKPVRPPPQPTQQQLASNTSPREVGTSLSPQSPSNNINPSSSSSSPSSSIRQSPSSSPNVARKVPPTPTNNNGGPPTTTTTTTTTMPPPPAFIKKLSPSSSPILPKRIVSSPPLNGNTAPPPPPIVHLPPPPPTNLPPPPTLSPSSSTTTSPSSSSLNLSGGVPLPPRILRNSDGSANNNNNSNNNSNNNINSLNLSTSGGIPPPPSFFNNNNNNNNNSGSFVNSASSNGSPSLQSQNSVGYFKPPPPPVPTRSASLDPKQMGQFIKPQQNQNNSNNINNINNNNNNIILPPPPNININNNNFVPYIPSNNNQQQSTTPPPIVSISPLKRNSIDNSVVNKRLSQDLNTMLVNRLQHGLSPPVATPFFDDKILGSASKSAELKEKRDQEERERRERERIKKEKEDSEKKEKKEKKGKEEQEKKDKKKKEEQEKKDKKKKEEEEKKSKSSSSSSSSSKKSSSDNTIVNQNIFNNTLSQIMENQRDAQSLSPSSLPYPLILKLLTESIMSLNGPYTEGIFRITGSGTEVNRLKKQINEHDFSLDTQDPHVLAGLLKLWLRELVHPIIPSELYNDAIKSRSKEEVSRIISLIPDQNKEVLNFLIPFLKNVSQPHYAQYSKMDIDNVAMVFSPGLLRSTVLTTDLLLNSQYEKDFVKCLIEMSP", "length": 684 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GR8-1", "protein_name": "Thiamin pyrophosphokinase thiamin-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKQEEEVQQQQQQQQQQQQPDKNNKETITWDVAEYGGYLFDKKLKAHNPLNHQMPLQYHHSQSTPHIPSSLSTSSTTSIKKPSSSLSDDESGGSSSSTPHSSNTPRKQFSFDDHCALILANQKLPKKLVDYFWDKCSVRICADGGANRLYSLGTKINQSSRWIPDYIKGDLDSLHEGVSDFFSKKGSSIVLDSSQDTSDLQKCFELIIDLEKGSGIKYRKIFILGGLGGSFSHEFANVNTLFDHPGRKIILASKDNLAWLLSSTYNHNIICRSETKCSLIPLSSKASQVTTSGLKWNLVKQSLNFGELISTSNVSLDNKVCVETSNPLIFIVDINP", "length": 337 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q561S0-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial", "gene_name": "Ndufa10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALRLLRLVPASASARGLAAGAQRVGRIHTSVHCKLRYGLLASILGDKTTKKLHEYSRVITVDGNICSGKNKLARDIAEQLGMKHYPEAGIQYSSSTTGDGRPLDIEFSGSCSLEKFYDNPKSNDGNSYRLQSWLYASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGFIRKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVSEIQSRIQKKGDPHEMKVTSAYLQDIEDAYKKTFLPKMSEICEVLVYSSWEAEDSTKVVEDIEYLNYNKGPWLKQDDRTFHNLRMLVQDKREVLNYTTVPVYLPEITIGAHQGSRIYDSFRELPGRKYAPGYNADVGDKWIWLK", "length": 355 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q568T5-1", "protein_name": "Chondrolectin", "gene_name": "chodl", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRATLRILCALTFLVSCSRGARVVSGQTVCQGNPEHPCYKIAYFKDVSSRVAFWEALQACEMDGGSLLSIENTAEQKHIEHLLRELSVSSSTGPASITDGDFWIGLTREEGDNAQEPGAFASCPNLYRWTDGSVSLFRNWYADEPSCGGEACVVMYHQPTALAGPGGPYLYQWNDDRCNMKHNFICKYEPESHLVKVQSDRPGGHDVDLSTEDKEDRRTPPTDEDESPRLIIAGPSSMLLIYVIIPTIPLLLLILVASGTCCFQMLSKSKPRTKTSVNQSTLWISKTPKIDSGMEV", "length": 296 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5HYN5-1", "protein_name": "Cancer/testis antigen family 45 member A1", "gene_name": "CT45A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKAKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETASSPKSQREINADIKRKLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5I0J8-1", "protein_name": "PHD finger protein 11-like", "gene_name": "Phf11l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQEEPGGSNSVLNGDANSDKKMEKWTCALCPEGHDWSVIYFEPSSNIAAHENCLLYSSGLVECGPHDPRNPARSFAVKSVKKEIWRGRRLKCSFCNNKGATVGCDLQSCPKNYHLHCAKEDRAILQVDEDYGTYKLFCQRHAPGGQEPTQVDAAVKASFLKKCLEAGLLTELFEQIQQKMISIHGRFMDDTASESDYEGIKILLFDCGLFKDTLIKFEEAIKSKACECEERLNQMKQQLELLADLQQNLRSFQECGVLDPSGSTSGSLLPPEDHQCRCQESPEVQAGSGDSL", "length": 293 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSKDLAIGVIFILQCSMGILRHFILLSYYLMLHYNKHSLKPIDLILMNMFIANFLIIFPKSMLQTVEAFGIKLLFSVFVCKFLLYIERVGRSVSIATVCLLSVFQAITISPRNSCLYGLKVKVPKYISLSIFLCWALYFVVNMILPVYAYIKWSSNNMTYKRTLKYCFSVGHDEFTGSFFTILFVFPEVFLAILIVWSGSSMVVILYRHKQQVQHIYCNYASTRTSPESRATKSIVVLVSVFICFYSISSILYGCIALFCDNSWSLINIANIISLCFPVLGSFVVSHNPDFPRFSLSWIRNTRRV", "length": 306 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNDRMESKDLAVGVIFILQCSMGILRHFTLLSYYLMLHYNKHTLKPIDLILMNMFIANFLLIFSKSVLQTVEIFGMELFFNVFVCKFLLYIERVGRSVSVATVCLLSVFQAITISPRNSCLNGLKVKVPKYINLSIFFCWPLYFVINMILPVYGCIKWNSNNMTYKRSVKYCFSIGHDELTSSIFTILFVFPEVFLAILIVLSGSSMVVTLYRHKQQVQHIYCNYACTRTSPESRATKSIVVLVSVFICFYSVSSILYGCIALFCDDSWWLINIAHIISLCFPIFGSFLVSHNPALSRFSLSWIKNTRRV", "length": 311 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3F0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "LOC100911184", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDFWNLAIRIIFLSQIIIGILGNVSLLFYYLVLYYREFTLKSTELILMHLMVANIIIIFSAGVPQTMTIWGMKQFLNDFGCKLLLYIHAVGRSVSICTTCLLSVFQAMTIRPQKFCGNDHKVTMERYLGCFISFLWVLYFLVNFIFLVYTYIKKNSNNETRKRDFGYCSTVGSDKISDSLYATLVMCPEVFFSVLIAWSSGSMIVILYRHKQKVKYIYSTHVSRRDYPESRATQNILAQMFTFLAFYTLSSTLRGSIALLSNHSWWLMNINHFTSLCFPSFGPFVLMSHYSIVSRFILFWLRKNCSNFLL", "length": 310 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5JQC4-1", "protein_name": "Cancer/testis antigen 47A", "gene_name": "CT47A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEGLGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEGNEAANFDLAVVARRYPASGIHFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT", "length": 288 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5QNN9-1", "protein_name": "Trace amine associated receptor 12e", "gene_name": "taar12e", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMSLNETQTENILLCYPLLSNSCPKLHRLAVVQVGLYVFLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGLLVMPYSMVRSVEGCWYLGDVVCKVHSSLDMTFCISSLLHLGLISVDRYWAICDPLRYRLRVTNITVTVFIVFIWLFSFVYSFYVVFSGVNTVGLETFIMQVYCVGSCVLYFNKQWGLICPILVFFLPGAIMSSLYMKIFHVARKHAKVMSERVTGGLKSQSSAQRERKAAKILAIVMGVFLFCWLPFFTVNALDPFFNFFTPADIFDAVIWFAYLNSTCNPLIYGFFYPCFQKAFKILIFTYICGVRNLDTFA", "length": 337 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5QNP0-1", "protein_name": "Trace amine associated receptor 12g", "gene_name": "taar12g", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTSNESENIQLCYPLLSNSCPKLHRLAVVQVGLYICLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGSLVMPNSMVRSVEGCWYLGDVVCKVHSSLDMTLCISSLLHLGLISVDRYLAICDPLRYRIRVTNTTVTVFTVFIWLFSVVYSFYVKFSGITAVGLEMLILQTYCVGRCVVFFNKQWGLICPVLAFFLPGAIMSSLYMKIFHVARKQAKVISERVTGGLKSQSSAQRERKAAKTLAIVMGVFLFCWMPFFTLTALDPFFNFLSSADVFDALFWFAYLNSACNPLIYGFFYPCFQKAFKILIFTYICGVKKANTLTFE", "length": 336 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5R1F6-1", "protein_name": "T cell receptor alpha variable 5N-4", "gene_name": "Trav5d-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTYAPTLFMFLWLQLDGMSQGEQVEQLPSILRVQEGSSASINCTYENSASNYFPWYKQEPGENPKLIIDIRSNMERKQTQGLIVLLDKKAKRFSLHITDTQPGDSAMYFCAAS", "length": 114 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5RKI7-1", "protein_name": "Solute carrier family 7 member 13", "gene_name": "Slc7a13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAMDIEKKIYLKRQLGYFWGTNFLIINIIGAGIFVSPKGVLQYSSMNVGVSLCVWVFCAVLSMTSTLCAAEIGITFPYTVAHYYFLKRCFGPFVAFLRLWTSLFTGPGVLASQALLLAEYGIQPFYPSCSAPAVPKKCLALAMLWIVGILNSRGVKELSWLQTVSMVLKMGILSFISLSGLFLLVTGRKENVRRLQNAFDAEFPEVSRLIEAIFQGYFAFSGGGSFTYVAGELKEPSKTIPRCIFTALPLVTVVYLLANLSYLTVLSPQELLSSDAVALTWTDRVIPQLTWSVPFAISASLFSNLVTSVFETSRTSYIASRNGQLPLLCSTLNVHSSPFIAVLLDVSMGSIAIVLTNLIELINYLFFVFSIWTVLSVIGILKLRYQEPNLHRPYKVFSPFLFITAAISLSMVLIPLIKSPKMQYIYVFLFFLGGLLFYVPLIHFKLKLIWFQKLTCYLQLLFNICIPDVSDEHVAEEES", "length": 479 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5XHX8-1", "protein_name": "Sperm microtubule associated protein 2", "gene_name": "Spmap2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGELGEHRSRSSLLSIPVLDTKTSGGSEYRESDGSLDLQSTLFEDHWLQSSQATTERNTDDPEEEIPPEEMVGEELPEVSNLEDSLRRDLEVEVVGMSHLSINERTTPTTSSAKCRKKKNHRLLELAKPKFNWQCLKDRTGRCCKGHVWISPRKTNLQFCLYWPSVYWTERFIEDTTLTITVPEVSRRVEELSRPKRFYQEYYNNNRTTPIWPIPRSTLEYQASNRLKRLATPKIRNNIWSINMSEVSQVSRAAQMAVPTPRTLRLAKPRAPATLLEEWDPMPKPKPYVSDYNRLLQLATPKALSEKCVPDRSPQWEVLNVTKNAVASSRIISLAQPKIRKDLNEGYNPYYISPASLVAQASPRIYELAVPKHITKKV", "length": 378 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q63550-1", "protein_name": "BPI fold containing family A, member 2F", "gene_name": "Bpifa2f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFQLGSLVVLCGLLIGTSGSLFDIFQNPELDVESVWSEINYRIRYALETMDLDMLADYLSKRGIELKIKDLRILNLNHEVSPNGDEVTLKMPMALNASLSLPARDLTTDVSISMEAITSFAIEKDPKTGRRVLNMQRCSLNTDNTSISLLNRKSNFVNLALDSALYLIKRGLTLPVRRQLCPVLQLIISNTFHPDEISNPQTAIST", "length": 206 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q64583-1", "protein_name": "Cytochrome P450 2B15", "gene_name": "Cyp2b15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVLLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFINTYLLRMEKEKSNHHTEFHHQNLVISVLSLFFTGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVIGSHRLPTLDDRTKMPYTDAVIHEIQRFADLIPIGLPHRVTNDTMFLGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDVNGTLKKSEAFLPFSTGKRICLGEGIAQNELFIFFTAILQNFSLASPVAPEDIDLSPINSGISKIPSPYQIHFLSRCVG", "length": 495 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q66X01-1", "protein_name": "NACHT, LRR and PYD domains-containing protein 9C", "gene_name": "Nlrp9c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVDSSSYGLLQYFQKLSDEEFQRFKELLQKEQEKFKLKPLSWTKIKNTSKEDLVTQLYTHYPRQVWDMVLNLFLQVNRKDLSTMAQIERRDKQNKYKEFMKNLFQYIWTSETNTYMPDRSYNTIIDRQYKALLDIFDSESDPATAVVLGTRGKGKTVFLRKAMLDWASGVLLQNRFQYVFFFSVFSLNNTTELSLAELISSKLPECSETLDDILSNPKRILFVLDGFDYLKFDLELRTNLCNDWRKRLPTQNVLSSLLQKIMLPECSLLLELGESSCSKIIPLLQNPREIIMSGLSEQSIYFYCVSFFKIQLGVEVFKDLKKNEPLFTLCSNPSMLWMICSSLMWGHYSREEVISSSESTSAIHTIFIMSAFKSIFGLGSSKYKRFKLKTLCTLAVEGMWKQVYVFDSEDLRRNKISESDKTVWLKMKFLQIQGNNIMFYHSTLQWYFATLFYFLKQDKDTYHPVIGSLPQLLGEIYAHKQNQWTHAQTFFFGIATKHVITLLKPCFGNISFKTIRQEIIRYLKSLSQPECNEKLVHPKKLFFCLIENQEERFVSQVMNLFEEITVDISDSDDLGAAEYSLLRASKLKNLHLHIQKKVFSEIHDPEYGSLENFKLDQKFSAINWTMLSILFCNLHVLDLGSCHFNKKVIEVLCNSLSPTPNMPLTVFKLQRLLCSFMTNFGDGSLFCTFLQIPQLKYLNLYGTDLSNDVVEMLCSALKCSTCRVEELLLGKCDISSEACGIMATFLINSKVKHLSLVENPLKNKGVMFLCKMLKDPSCVLESLMLSYCCLTFIACGHLYEALLSNKHLSLLDLGSNFLEDIGVNLLCEALKYPNCTLKELWLPGCYLTSECCEEISAVLTCNKNLKTLKLGNNNIQDTGVKRLCEALCHPKCKVQCLGLDMCELSNDCCEDLALALITCNTLKSLNLDWNALHHSGLVMLCEALNHKKCKLNMLGLDKSSFSEESQTFLQAVEKKNNNLNVLHFPWVEDELKKRGVRLVWNSKN", "length": 1004 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q675C0-1", "protein_name": "Taste receptor type 2 member 102", "gene_name": "Tas2r102", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPVIYSFATLLIHVEFIFGNLSNGFIVLSNFWDWVIKRKLSTIDKILLTLAISRITLIWEIYTWFTSVYGPSSFAIGMKLQILYFTWILSSHFSLWFATALSIFYLLRIANCSWKIFLYLKWRLKQVIVGMLLASLVFLPGILTQRTLEERPYRYGGNTSEDSMETDFARFTELILFNLTIFSVIPFSLASISFLLLIFSLWKHLRKMQLSSRGHGDPSTKAHTNALRIMVSFLLLYSIYFLSLLLSWIAQKHHSKLVDIIGIITGLMYPSAHSFILILGNSKLMQTSLWILSHLRCRLKGENILNPSGNQVTSCYIFCIANKSVS", "length": 327 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q68FP3-1", "protein_name": "C-C motif chemokine 6", "gene_name": "Ccl6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRHSKTAISFFILVAVLGSQAGLIQDTVKEDRPFNPTIIHQGFQDSSDCCFSYASQIPCSRFIYYFPTSGGCTKPGIIFVTRKRKRVCANPSDQRVQTCISTLKLGPRSGNSAIA", "length": 115 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6EKJ0-1", "protein_name": "General transcription factor II-I repeat domain-containing protein 2B", "gene_name": "GTF2IRD2B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTERGCAFVNARTDFQKDFAKYCVAEGLCEVKPPCPVNGMQVHSGETEILRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLELSNVGKRKIDQEGRVFQEKWERAYFFVEVQNIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQYTERMRDEKLHELKKGLRKYLLGSSDTECPEQKQVFANPSPTQKSPVQPVEDLAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFLRVEKSLKKFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPESLCAQKLKMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGLNYIPKIAELKTEFQKRLSDFKLYESELTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT", "length": 949 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6NXT2-1", "protein_name": "Histone H3.3C", "gene_name": "H3-5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSTPSTCGVKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 135 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6P3W6-1", "protein_name": "NBPF family member NBPF10", "gene_name": "NBPF10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRSLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASRSLYEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEAEKVLESSAPREVQKAEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTLVVDRESSHDECQDALNILPVPGPTSSATNVSMVVSAGPLSSEKAEMNILEINEKLRPQLAEKKQQFRNLKEKCFLTQLSGFLANQQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHAQERELTQLKEKLREGRDASRSLNEHLQALLTPYEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGSYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSQDRCYSTPSGCLELTDSCQPYRSAFYILEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAFDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEENHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGYLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELCDSCQPYRSAFYVLEQQRVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDKIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNGVLMEVEEREVLQDSLDRCYSTPSMYFELPDSFQHYRSVFYSFEEQHISFALYVDNRFFTLTVTSLHLVFQMGVIFPQ", "length": 3795 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6UGQ3-1", "protein_name": "Secretoglobin family 2B member 2", "gene_name": "Scgb2b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLALLVTGELGFQRTEACIPFFGVYLGILSGNRIGLHTELAPFDPTVEEKEAFEKIQDCYEEEGLKAKTEDMKLMTTILFSSECRSYYTKEVLKNILVKFSKKLTHGS", "length": 114 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6YCH2-1", "protein_name": "TD and POZ domain-containing protein 4", "gene_name": "Tdpoz4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGELEAKSRGDTQSHEQKLCYRWTISNFSFFVEETEEYITSLVFSLEDNDKMTWCLRVYPTGVDEKNKDYVSLYLILLSCEKGSVWAKFEVCILNAKGEKCNTERIPSFSRIQPHQPFGFEKFITRDSFLSPAQVLTPDDKFTLLCKVSVLQDSFSISGQNPRPAIKVTRCTLENDVGELWENPLFTDCSLLVAGHEFRAHKAILAARSPVFRAMFEHEMEERLTNCVEIHDLDPQVFKEMMGFIYTGKVPHLHSHSMACDLLAAADRYGLEDLMVMCEDALCRSLSVENAAHTLIVADLHSTEHLKTQALDFIIVYASEVSKTSGWMSMVESHPRLVAEAFHSLASAQRVFWALPFKQLKWSLRPTQL", "length": 370 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6ZMA2-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNCTQSPGFILLGLSSDPEKWQLFFSIFLALYLLGFLGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKMLEALWTGDGSISFSGCLTQMCLFGVFADMDNLLLAVMAIDRYAAICQPLLYPLLMTPCRCGVLACGSWGIAHCASLVYTLLLSQLSFHSNQEIPHFFCDSRPLLWLSCSDTHLNEFLMMVLSALLGISALLCIVSSYGCIFCAVARVPSAKGRRKALATCSSHLSVVLLFYSTVFATYLKPPSTSHSSGEVVAAVMYTLITPTLNPFIYSLRNKDVKNSLKKLLNMEKPLD", "length": 309 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q70YC5-1", "protein_name": "Protein ZNF365", "gene_name": "ZNF365", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MQQKAFEESRYPWQESFENVAVCLPLRCPRCGDHTRFRSLSSLRAHLEFSHSYEERTLLTKCSLFPSLKDTDLVTSSELLKPGKLQSSGNVVKQKPSYVNLYSISHEHSKDRKPFEVVAERPVSYVQTYTAMDLHADSLDGTRSGPGLPTSDTKASFEAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQEVQRRERALNRQVDVAVEMIAVLRQRLTESEEELLRKEEEVVTFNHFLEAAAEKEVQGKARLQDFIENLLQRVELAEKQLEYYQSQQASGFVRDLSGHVLTDISSNRKPKCLSRGHPHSVCNHPDLKAHFHPKGRNHLKKAKDDRASMQPAKAIHEQAESSRDLCRPPKKGELLGFGRKGNIRPKMAKKKPTAIVNII", "length": 407 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q71LE2-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "Q7KR10-1", "protein_name": "Probable cytochrome P450 12d1 distal, mitochondrial", "gene_name": "Cyp12d1-d", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MNTLSSARSVAIYVGPVRSSRSASVLAHEQAKSSITEEHKTYDEIPRPNKFKFMRAFMPGGEFQNASITEYTSAMRKRYGDIYVMPGMFGRKDWVTTFNTKDIEMVFRNEGIWPRRDGLDSIVYFREHVRPDVYGEVQGLVASQNEAWGKLRSAINPIFMQPRGLRMYYEPLSNINNEFIERIKEIRDPKTLEVPEDFTDEISRLVFESLGLVAFDRQMGLIRKNRDNSDALTLFQTSRDIFRLTFKLDIQPSMWKIISTPTYRKMKRTLNDSLNVSQKMLKENQDALEKRRQAGEKINSNSMLERLMEIDPKVAVIMSLDILFAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYYPNGFGTMRTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFNRDASRPFKTMFLMEPAITFPFKFTDIEQ", "length": 521 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7M715-1", "protein_name": "Taste receptor type 2 member 117", "gene_name": "Tas2r117", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKHFWKILSVISQSTLSVILIVELVIGIIGNGFMVLVHCMDWVKKKKMSLVNQILTALSISRIFQLCLLFISLVINFSYTDLTTSSRMIQVMYNAWILANHFSIWIATCLTVLYFLKIANFSNSFFLYLKWRVEKVVSVTLLVSLLLLILNILLTNLETDMWTNEYQRNISCSFSSHYYAKCHRQVLRLHIIFLSVPVVLSLSTFLLLIFSLWTHHKRMQQHVQGGRDARTTAHFKALQTVIAFFLLYSIFILSVLIQIWKYELLKKNLFVVFCEVVYIAFPTFHSYILIVGDMKLRQACLPLCIIAAEIQTTLCRNFRSLKYFRLCCIF", "length": 330 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7M719-1", "protein_name": "Taste receptor type 2", "gene_name": "Tas2r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCAVLRSILTIIFILEFFIGNLGNGFIALVQCMDLRKRRTFPSADHFLTALAISRLALIWVLFLDSFLFIQSPLLMTRNTLRLIQTAWNISNHFSIWFATSLSIFYLFKIAIFSNYLFFYLKRRVKRVVLVILLLSMILLFFNIFLEIKHIDVWIYGTKRNITNGLSSNSFSEFSRLILIPSLMFTLVPFGVSLIAFLLLIFSLMKHVRKMQYYTKGCKDVRTMAHTTALQTVVAFLLLYTTFFLSLVVEVSTLEMDESLMLLFAKVTIMIFPSIHSCIFILKHNKLRQDLLSVLKWLQYWCKREKTLDS", "length": 310 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7RTZ2-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 1", "gene_name": "USP17L1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHCKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEVQWYKMDDAEVTVCSIISVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q7TMR7-1", "protein_name": "Monocarboxylate transporter 7", "gene_name": "Slc16a6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTQKNSKLCSRANVYTQVPDGGWGWVVAASFFFIEVFTYGVIKSFGVFFNDLMDSFDESNSKISWIISICVFIMTFTAPLSTILTNRFGHRLVVMGGGLLISVGMIAASFSQRVYQMYISIGIVSGLGYCFSFLPTVTILSQYFDKRRSMVTAVASTGECFAMFAFAPAITALKEHIGWRYSLLFVGLLQLNVMVCGALLRPIIIKGPGSPKAIPLEPRREVQYMLENEKTRTSIDSIDSGVELTTSPKNVPSEAKREQEVRVEQQQTLVVGPKHSQKRAPLLDFSILKDRSFICYTLFGLFATLGFFAPSLYIIPLGISLGIHPDRAAFLLSTMAIAEVFGRIGMGLVLNREPIRKIYIELICVILLTVSLFAFTFATEFWGLMLCSVFFGSMVGTIGGTHIPLLAEDDVVGIEKMSSAAGVYVFIQSISGLAGPPLAGLLVDQSKIYSRAFYSCAAGMALAAVCLALVRPCKKGLCQNPHSGENQTDGHRGKALQDIPEDFLEMDLGKCEPRAHMKMDPV", "length": 522 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TN50-1", "protein_name": "Mas-related G protein-coupled receptor member B8", "gene_name": "Mrgprb8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQNSIP", "length": 328 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TPX8-1", "protein_name": "Oogenesin-2", "gene_name": "Oog2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNFYSPPTLMELARQCLLRDEYLAISALKDLPNMMFPVMFKEAFIDGHTKILTAMIPVWPFPYLSVGTMLKNLNLDTLKAVLEEIDILISKPVFSSRCKLREITLSHDLVVVWAGSHEVEGLPEFMEQEKPVENSPGYGTKNKLKVTTELQFMEGHLDECSTYLLQWAYQREDSIHLHCRKLKIYGLTKAAVIEMFKIVHAEYIEDLELSCLCLEYLDFLNPYLKQMSNLLSLTLDEIIYTLNIDDYRNLNEEKVITVISHLPTFHHLQELYVHGVIFIECLRCLKKPLEVLSFTDCDLSQSDLDYLPYCLNIFELRSLHLTDVRLSNLLLEPLGFLLERVRHTLKSLQLMSCEMGETHFNALLPALSQCYQLTVVNFYGNELSLLFLKKLLHHTAKLSQLADELYPAPQECYDNRDVVLSHRLENFCSELLDILRAIREPKKVTFGTIKCSKCGGSYVYDLETQCCFFEKNPPWA", "length": 476 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TQY5-1", "protein_name": "Olfactory receptor", "gene_name": "Or4k38", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEDSNRTVSSEFIFQGLCSSRQLEIFLLLPFSILYLMAVVGNLFVVILIIIDHHLHSPMYFLLANLSFIDFCLSSVTTPKLTIDLLKENKTISFVGYMRQIVCVHFFAGGEMVLLVTMAYDRYVAICRPLHYSSIMDRQKCIWLVVISWIVGFVHAISQMLLILDLPFCGPRVIDSFFCDIPLVMKLACMNTDTLEILINADSGILATTCFILLLISYTYILLTVQHRSKDGSSKALSTCTSHIIVVLLFFGPIIFIYLWPVSITWVDKFLAVFYSVITPLLNPAIYTLRNKDIKNAIKKLISHK", "length": 305 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TR72-1", "protein_name": "Olfactory receptor", "gene_name": "Or8k25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKYNLTIVTEFILVGITNHHEFQVPLFGLYLIIYLTSLVDNLGMIILTIVDSRLQTPMYFFLRHLATTDLGYSTAVGPKMLRNFLVDQNIISFYACAIQSSFFGMFIVCEFFILSAMSYDRYVAICKPLLYTVIMSQKACWILVTIPYLYSIIVSLLVNIKIFTLSFCGYNVISHFYCDALPLLTLACSNTHEIEAIILIFSAFNLLSSLLIVIGSYLLILMAILRINSAEGKWKAFSTCGSHLTVVIVFYGTLIFMYLQPTFTHSIDTGKVISIFYTQVIPMLNPLTYSLRNKDVKDVLKKPMEKVHNLFS", "length": 313 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TSF0-1", "protein_name": "Desmoglein-1-gamma", "gene_name": "Dsg1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWHSFRIAALLLTSLVVLEVNSEFQIQVRDHNAKNGTIKWHSIRRQKREWIKFAAACREGEDNSKRNPIAKIHSDCAANQPVTYRISGVGIDQPPYGIFIINQKTGEINITSIVDREVTPFFIIYCRALNAQGQDLENPLELRVRVMDINDNPPVFSMTTFLGQIEENSNANTLVMKLNATDADEPNNLNSMIAFKIIRQEPSDSPMFTINRKTGEIRTMNNFLDREQYSQYSLVVRGSDRDGGADGMSAESECSITILDVNDNIPYLEQSSYDITIEENTLHSQLLQIRVIDLDEEFSDNWKAIIFFISGNEGNWFEIEMNERTNVGTLKVVKPLDYEAVKNLQLCIGVRNVAEFHQSIISQYRLTVTLITVTVLNVVKGCVFQPGSKTFIVDSRMEANHTVGEFLATDCETGQATNKFKNVRYRYVMGNNPENLLVVDSGIITLRNRVTMEQYERLNKRYEGTVLSIHDSLQRTCTGTIIMVLCGFWTTTEHPTTSTEKPVTLSITPNVDNVHFGPAGIGLLIMGFLVLGLVPFLLISCDCGGAPGGGAGFEPVPECSDGAIHTWAVEGPQPGGITTICVPQMPPGNANVIEYIDNSGVYTNEYCGREMQDLGGGERTTGFELMDGVKTSAAPEICQEYSGTLRRNSMRECRDGGLNMNFMESYFCQKAYAYADEDEGRPSNDCLLIYDIEGVGSPAGSVGCCSFIEDLDESFLDTLGPKFKKLADISLGKEIDSYPDPDPSWPPQSTEPICPQHMEQLASGHPSISPHFGKTTVISENAYPSGPGVQHPMLIPDPLGYGNITVRESYTTSGTLKPSVHFHDNQQASNVVVTERVVGPISGADLHGMLEIPALRDGTNVIVTERVIAPGSSLPNSLTIPNPRETSNVVVTERVIQPTSGMIGNLSIPP", "length": 911 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q803M0-1", "protein_name": "Protein phosphatase 1 regulatory subunit 3B", "gene_name": "ppp1r3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPIELAMSLYLSSDEFLNPRASKYSRPLQPCLNQCKSSKLSFSSLKEQSEFNGVSRALMIPGRAKKHVSFADHKGLALTVVKIFSEFDDPIDIPDNIDNFFTSSLTVSEGKDKLTLDFDQPSADYLKFRQRIENDHVCLEHCMLKEKSIMGTVKVKNISFEKSVKLRITFNTWKNHTDVECQYVKDTYTGSNRDTFSFEASLPEQVPSHERIEFAICYEVNGDTLWDNNQGKNYRIIQSALRKSSNESNGGHQQYSQSDWDIHFDRYGSPRCSRGIFPHWPSYVGYEDIGPYY", "length": 293 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q80SW5-1", "protein_name": "Embryonic testis differentiation protein", "gene_name": "Etd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDEKNPEAVPRPPEQNTELVPPKKSKSKKPANILIYLIDRHLGRPRNDMDLFEWVWTLK", "length": 59 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VJ6-1", "protein_name": "Zinc finger and SCAN domain containing protein 4C", "gene_name": "Zscan4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSENDPREVPGLQSRQEQPISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VT8-1", "protein_name": "S100 calcium-binding protein, ventral prostate", "gene_name": "S100vp", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSTEQEIMELLMILQEFSVKKIDKLDVQEVKRLFREELPNFLKAMDEATKNKILNDKGKEMPFDEIWDMIGRMALEYRKKNSNALKD", "length": 92 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q80XZ1-1", "protein_name": "Polypyrimidine tract-binding protein", "gene_name": "Smptb", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRNSPPAAEGNGSKRFKGDSWGTRDPSRLVHILRLPSCVTEGEILCLALPFGEVSNLLFLRAKNQAFVEMSTEESANTMINYYTWMPPVLRGQPVHIQFAHYRELKVSSSPSQEISLSQAGDSREATASSLVAVPGQAAASGQTAVPSQLGAQPCLPPEDSYQAGTVALAPPASAVDTELVVAWQSPVLRILVENYFYRVTLEVLHQIFSRFGTVLKIITCTKNNRFQALLQYAHVMSAERAKLFLDGQNIYDACCTLRISFSGLTNLMVKYNNDKSRDYMRPDLPSDDSQPSPVQVQNMASALPAPAMSSASPYASIALPHTFAIPQAAGLANPEVFKTLHPQAIQEVAMASSSSSSSTAAAAVGAAEIAAAAVPGAEGSMVTSGSPGVGSPVLLVANLNQEKVTPRSLFILFGAYGDVHRVKILFNRKENALVQMADGSQAELALRHLNGHKLYGKALCILLSKHQSVKLPREGKEDQGLTKDYANSPLHRFKKPGSKNFQNIFPPSATLHLSNLPSLVSEEELKNLFSSNGYAVKAFRFFPKNHKMALIRMGSTEEAIQALVDLHGHLLGQNHHMRVSFSRMTI", "length": 588 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q810J1-1", "protein_name": "Pregnancy-specific glycoprotein 22", "gene_name": "Psg22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVSSELLSNGWTSWQRVLLTASLLTCWLLPITAGVTIESVPPKLVEGENVLLRVDNLPENLRVFVWYRGVTDMSLGIALYSLDYSTSVTGPKHSGRETLYRNGSLWIQNVTREDTGYYTLQTISKNGKVVSNTSIFLQVNSSLFICGRPSPPALLTIESVPASVAEGGSVLLLVHSLPDNLQSLLWYKGLTVFNKVEIARHRTVKNSSEMGPAYSGREIVYSNGSLLLQNVTWEDTGFYTLQIVNRYWKMELAHIYLQVDTSLSSCCDDFNSVQLRINPVPPHAAEGERVLLQVHNLPEDVQTFLWYKGVYSTQSFKITEYSIVTESLINGYAHSGREILFINGSLLLQDVTEKDSGFYTLVTIDSNVKVETAHVQVNVNKLVTQPVMRVTDSTVRIQGSVVFTCFSDNTGVSIRWLFNNQNLQLTERMTLSPSKCQLRIHTVRKEDAGEYQCEAFNPVSSKTSLPVRLTVMNE", "length": 475 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q863C3-1", "protein_name": "Gastrin-releasing peptide", "gene_name": "GRP", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRGREVPLVLLALVLCLAPRGWAAPVTAGRGGALAKMYTRGNHWAVGHLMGKKSVAESPQLHEEESLKEQLREYAQWEEATRNLLSLLQAKGARGHQMPPWEPLSIHQPAWDSEDVSNFKDTGPQHEGRNPQLN", "length": 134 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q869X2-1", "protein_name": "Probable polyketide synthase 17", "gene_name": "pks17", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTFNNIKDENNDDIAIIGMGFRFPGGGNNPYQFWNQLSNKMDGISKIPTEKWSRSFYEQKYINNEYGGVLKDEEWKNFDPLFFGISPKEAPIIDPQQRLLMTTLWEAFEDANIKPSTFRGSDTAVFIGMMNTDYQRCQFRDISYVNPYITPGTAGSFISNRLSFSFDLRGPSMTLDTACSSSLNAVYLGCQAIANGDSKMAIVGGVNGIFDPCFSMTFSGLNMLGHKGQCRSFDAGADGYIRSEGGGVCILKKYSDAIKDGDRIYCVIKGGSSNVDGYNAKTNIIQPSMKAQGENIEIALKKSGVNPSDIYYIEAHGTGTPVGDPIEIEAISRIFKDNHTPDAPLYIGSVKSNIGHLESAAGIASLIKVALSLKNRSLVPNIHFEKPNPLIKFEDWNIRVVTDEIQFPINKLINMGINCFGLSGSNCHMILSEAPINYDELLKTTNNNSTSSSSNDDKKEYLIPFSANCNISLDKYIEKLISNQSIYKDTILFKDFVKHQTISKSNLIKRKVITASDWDDFLNKRNETTSTSSLTSTISAPASSTPVIYVFTGQGPQWRDMGKALYETESVFKDAIDHCDKLLANYFGYSILQKLLSLESEDSPEIHHPILAQPSIFLIQVGLVALYKSFGISPSIVVGHSFGEIPSALFSDVISLETAVKIVYYRGLAQNLTMGTGRLLSIGIGADAYLEKCALLYPEIEIACYNDPNSIVITGSEQDLLGAKSTLSAEGVFCAFLGTPCSFHSSKQEMIKEKIFKDLSDLPESNVPCVPFFSTITGSQLSHKGFYNVQYIYDNLRMPVEFTKAISNIFNFIEENESYKNAIFLEIGPHPTLGFYIPKCKPSNSTITSKPIIVSPLHKKKEELTQFKLAISTLYCNGVEIDFASGQQLLPTSSSSGGGDISSFKESTNKLPRYQWDFEEYWDEPNQSKMVKRGPSNNLLGHDQFAGNTLMELFIDIDKSAHQYLKGHKIKGKYLFPGSGYIDNILRQFNGQDITIFNLEFSNPFFLKDGVQHHLQTSITPTTKGEFKVEFFIKDNRNSTKWTKTSNGRIGLFKHNPKNNKLDIEKLKSQCSFTTLTKSEVYNKLLLLSLPYGPTFQRVESCSIGDGCSFFKLSMSPCSEFDKDFLNPSIIDCAFHGLLVLSEGPQEIVFDRLQDMKFYSSNVPSTRPQFIYAFAKFDKIEGNSTHGSLNIILEDGTLLISIKNVKCTSLIRLKKQSIKYPSQNVYSHHWQSKDSPLTLIENQLIEEKSSESKINFEKLLNDKLFNYYLIRLLNQSIKSEFIEFDYKTSTVDTLDIGSKNAKLLEKIQSILNPIDSLDQSIDITSLKQAIIVKSSFKNEIKLVEKSIKRIVSLLKGGESEHFSPSNPSSPNDTPRNNSNNCSSKNNAASSDDADDDTNNEETINQLNNEPFNFSNSQFISNQNQLISKTIVNSFDRLINSIEIGEKKLIKIIDLSSIYQNYQLSKLLLLQLNQLLINLSNNNNIEIEYTIPSNTKNIDSITEETKSISNVLNIKYRSFDLQDDLESNGYLNSNYDLIITSLLLVSTNSIDSNEVLSKLYKLLLPKGQLILMEPPKGVLSFNLLFANDFKQSLEIKSEQEIKSLIIYCGFTKIETNLNTKDDEEQQQPPPPSILIVQAEKRDIESMSLTFSSDPKSLNSSYSNCIFIVSKEQKENPTSYIQEYFDITEFFCQNATIIEADDSELLTKTIESGVGKNDIIFFLVSLEELTIENYKQVTMQYTLVNQILLRNNLSTRFALLTYDSQNGGKNYLGSSLIGTFRYFLEFRSLNIFSIDVDKDSIDNLTLFLRLVDLSTIGDRETIVRNNKIFVQKIFKEPKLLSPSNNYEKNTNNLFLYSNSNLDFSFQSKEKLLHGCVEIKVMSTGINYKDSLFYRGLLPQEVFSKGDIYSPPFGLECAGYITRVAPSGVTRFKVGDQVVGFASHSLSSHVTTHQNKIVLKPENISFNEAAAVCVVYATSYYSIFHIGAFIADKESILVHSATGGVGLASLNLLKWKRNQLKKHGNSEISNDASIYATVGSKEKIDYLQEKYGDLITAIYNSRDTEYCDEIKQQSAQGGVDLILNTLSGDYLSSNFRSLSQVGRIMDLSVTQLVENDSLDFSNFKYHVGYNTIDLDRATKYNSKIIRDILTEVFDAISDGSLENIPVKVFPAIQVKTAIEYINERVHIGKIVVDFENFEQDILKPALQEKENPIQLNKVKKLEHTCDTLNNTILITGQTGIAVHILKWIISGSVLNSNKSQQQVTDFIILSRSSLKWELENLINQTKHKYGDRFRFHYKSVNIADLNSTRTAIDQVYSSCKNVSPIKSVLHFATVYEYILPENITQTVIDNTHNPKAVGAINLHNLSIEKDWKLENFILFSSIGAIIGGSKQCAYSSANLVLDSLSNYRKSIGLASTSINWGGLDAGGVAATDKSVASFLEGQGILLVSLSKILGCLDSVFQPSNSHLSNFMLSSFNIDNLLSSAPQMKRKMDHHLTNYKTSSASSDDSLGDSGSTQAKVISTISELLSIHPSKLNLDTRLKDYGIDSLLTVQLKNWIDKEFTKNLFTHLQLSSSSINSIIQRISSKSTSTSTPNPTNTSKQTATKKT", "length": 2604 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q869Z5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSHLTPKPNVLNVYGAGTPNFVKVQILLEEKNIPHVYHKIDFSKNEQFDPEFLKFSPNNKIPAIVDNTVEPNGISVFESAAILMYLSEKHQFTDLYADFKTDPALHAKHLEFLFFQMSGVGPMTGQLGWFLRQPEPKNTQAIERYSEEVKRLYRVLDKILSTNTWVAGEQYSIADISLLGWALYFLKGYYDDHITREQFPNVYRWLDLAAKRPAIIKVLETIQPKQK", "length": 227 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AE3-1", "protein_name": "Probable polyketide synthase 9/36", "gene_name": "pks9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLKNINLKEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFKEWKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHTNKHQDSVLKNAIAQSTSAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVDIIKAYSILSMLSKTHGKCKTFDESGDGFTRGECVGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNFLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTTMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNEIVFIEIAPHPTLLFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQSINLPLYQWDEELYFTQAQTLEQHRKEGPPIDHLGTSNSYNSPFNNSYRTSIDIKNKPFLYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPPKYNIKEIIENKCNLSKLTKNELYTHIKSKTGLNYTGVFQGVTECYIGGDCTLSVVSLESQTNSFLNIPILDTCLHGMIGLSNDQCQIVFDKAIGFKYYSSNIPANLKDYKDSVYVYSHLKSKSVDSFFGSIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNEVIIKSSRIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCRYLRKKNQMISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIIALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGFNVIYRPLKIDESLIETQSINPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCSMSQQSWCQLLKTCNFKDIAMSKECIFVGIVIHAQKPPISLLNSQPKRDNIIIYGGGNPIFVENIKLYSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNFKQITLEYIEINRKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLNTLDFDYDSTQNYINSNNKDMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNYKKIQIKPSNLSHNEASSIPIDYLTSFMSLFNIGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFNSNLFVTVNSYETKRYLQDNYGDFITGIYSNTDKSYVTEINKKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLAKYGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFELSLIQKNKIHKCLYEISNAFENGELKTIPIKEFTNLNIKDAIKYITNNKIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILVTGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINETKLSNNNIKFHFKSVDIGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYVCANALLDSFSKYRESLGLPSTCICLGAIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNAGKFTNSMLSNFKPSKFKNNQQTSLFLKFDYLMNLKNNSEETKIENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTISTSMKMILNSLMKNNQNIDDNNKDLPSNRIDYWKNEMKFEESIKPISNEIQSRNNSEKIILLTGTTGFLGGFLLFNMVRLDSCKLIYCLIRNKSKSNNPLDEIINNLKYHQLYEKLNQSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKKYNIPSILIRPPSIFLNPETGIGHISDFSLLSIQSCYELGYYPNQFENDFILINTITWLSNNITNIIMNDNCWTDSKMNIYNVHGKQIQSSLIIKPLEKHFNCKHINTNDWIDMVNNSNKKSCIKLKSFHSLDIILKSENNRYKPNENQSISLSTKSLLESMGSYNTDLEITDKMIISHINQIFNLNETI", "length": 2931 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AF8-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFSKFSIKENKPKKVKSNSSKGFNNNEINSTNNNNNNNNNNNNNNNDSDNFINNNDSNNNNNFNNNNNNNSNNINNKTEDSNDISLLINQFIGSSPAPSTCSGSDKFSIKPKKIVTPSKRKNSTSGSDIIDFNNCNNNNNSKSNSDSNNNKYNNSNSNNNSCNNTNNGNERKMKGYDYGNNNSNNNYSSSSRDYNSNNNSSPRDYNNNNNNNNNNNNNNNNNSNNNSPRDYNNSRDYNNNNTNNNSSPRDSNSNNNRNSSSRDFSNNNSSPRDYNNSRNSNNSFLNNNNNNNNNSNNSNDNSPRDYNYSSSNSSPRDYNNNNDTFSKKRNNVGNSILEIKSNPTSPRIKPIMVWPRSSPRIVNKLPPVQSLVDLTEIEMIDDNNNNNNNNNNNNNNNNNNNNNNNSNNNNNKSGSNNNFSDSDSDKDNYNNNNNTNNNSFNSDSDNYNNSNNNNSNSNSNSNSNSNSNSNNNNNNNNNSNNNNNNNNNNNSNNSNKSNNNFSNIKILEKRRKSINEISDNLTTRNIEEIDSKMAHEFEHPFLEKLIFAGQRPPFVECDDYFLKRYKNQFQYYLDISMKSIINTRDIGEGDDDDEINSVPFKCTLCSYEYDEENNNENTNGFIDEADKIYNRSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNSNNNNNNNFYDKKYFKNNYFQHLLSKHLNQIKAKGIQDTNVYNDEANIPLGSKKCDHLECSEIILKNEFTKHIKKLHHHHKDEDIDICPRCKILKKSIQKRIVKFSKKKQEKDDDNNSKPVSNKVATISHNPSPNNIDKDINNNNNNKNNKNNTNNLENDNNDNSSNNNYLENEEEPEIVFQDIKPNNNNNNNNNNNNNDDNNNDNNDNNDNENNNDNNNDNENSNNNNNNS", "length": 901 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86BK9-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 22", "gene_name": "Dmel\\CG32971", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSDSKDEALLKSFKTQLKDNVLSMLLNFEELLKLVSPRTPGQITNDTEQELNAFEMQVRAGNFVRAGEALIKLVHDVKEYQIIYDYSNIEEEMDRQSEAMHAKVTEYDQTLIKMVKDLEEELSELEYEYYEKSGGPDLDSKDLLV", "length": 145 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q86IJ5-1", "protein_name": "Uncharacterized protein DDB_G0272718", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPPHGHHHHHHGHHGHHEHITITPVYAPPQVVQPIYAPPPVVQPVYVQPPVVYPQATIVLETGHHHGHHHHHGHHGHHDHHHHGHHGHH", "length": 89 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86IV6-1", "protein_name": "DNA replication ATP-dependent helicase/nuclease DNA2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNFFEKKNNNNNNSSNNNNNNNNNKNNNNKNLDKNNSSDRNNNNNGDKNNLKPTQKSLIDLWFQVDDEDEEYELSSLSNDGGSSFNSFKVNNRDTSIGSDIYSKTITPSSLALSTSSLISSTLTPPTQSPPFSKKNEKTSSFLNSPSSQKSKSNNSNVKEKLSPQYSSSSQLSDFFKKKKRPLLDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTISSLNTNSNNNSSGSSNGSSSSSSGGGNKSSNNKKQKVSQSTSSTSLKEKQSQQSILSYLNPTPSLPTPIFDKPIERSDSNLATSSFSKLNFDDIPLDDEELSQKINTPSPKLILKNTFSSTPTQKSPSLSSTPPNKIKITDKKLPNSSSSSSSPPPSSAKSKLSHRSQSSPLSPLITNLNQNKSNEFDDINFNFNIPSPLKEINNKPNIKSNSKETLTPLTQIFHSSSPPPSIIIESSPSVCFSPTPTKNQSPTLSNLSPTFSFLSDTSPVKSPSQLFEFTFDDPLSPKLISSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNTFISKNNLINLFNEQSNQENVSTTTTTTTTTTTSTSTNNNNNNRYERVLIINVFYEVTQIFNNSNDKIHKKTLSGFSESIGESREIQLLDEWIYTPVRPGDIVNVIGEFDDNGEIIINNIQNLLILHPDILITGTELGGSLTCTRRSVLKEQIRVGNSNSSTVPIFGSIVHEIFQECLKNNRFHLDDINTFKQEIIGKSTFQLGLSSLGETQDTALNHLENWLPTIDKFAKTFILPSSSSSSASSLKKNLIEINSEKWHLSISKILEIEENIWSLMYGLKGKIDSSLEIKLVKQQQDEKQSKQSKQSKKKKQQTTSPNNNNNNNNNNNNNNNNNNNNNNNNNNGPTTCYLNVPFEIKTGKPYQIPYISHSSQVLIYTLLMNDRYDQDIEMGILYYLKSQEFKSVGLNYGLLHPILFERNQIRSLIVSRNLLAYFLNLNSQPLLKPNPILPEMLRDYHSCTKCYSIDPCVLYHKAIENGDQFTSSLGDLFLEKTNHLSSIHINYLKNWNKIISLEYSIKNNKRKLIWNKSRKFGEKNNSCIGELILISEEYSEITETFSYRFRVNPDKLLNSSISEGDYLLISVEDKYYGMGSGQLSNIINDIITITCREKLSEPPSLLSDYTTPNCNNNDPSYFGNYRNKPLIYIEYEDADQQQQQQQQQQQQQQQQQQQQQQQSQKQQKQKQPNFTQLRGLNNYVNNSKLTPFKWRVDIDEQLSGLSIVKSNLFNLFLKENQKLRSLIVDLEAPIFDKLEQENYWKSIDFQNDYPLLNIDQRNAIIKTLSAKDYSLIHGMPGTGKTTLVISLIHILWRLGKKVLITSFTHTSLDHLLLKFNKQYPNIEMLRVASSLNQIDPSLHRFTLEKQSFGNITQSKQYLERQQLVATSCLGINHQCLLKMQFDYCIIDEASILSQPISMGPILKCKSFVLVGDHHQLPPIVNNKEAGKLGLDISLFKQLSTSHPSSVSNLYHQYRMCNSIMSLSNHLIYNNRLVCGNQSISNLSLQTNYYHNNNNTTHIDLLDHINNWPQIICNPNSSVIFVNTDQLNNSTESSNGDLFYNQTEANIVAILTNCLINKLNINQSQIGIITPIRFQLNFIKKSILKYLSIENNNNNNNNNNNSNNNNNNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNQNNNQNYLKKIENLDILTIDKFQGKDKDCIIISFVRSNEKKEIGELIKDWKRMNVAFTRAKKKLIFVGSKSSLSKFPFFLDFFEFLDSKNWIYNLNNKIQF", "length": 1838 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86JI5-1", "protein_name": "Probable polyketide synthase 5", "gene_name": "pks5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDMKLNDIENENFINQMKGVAIVGIGFRIPSGNSENSISSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSDAHHIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHANKHPDLILKNAIGFSPSTLSNRISYCFDIHGPSLSIDTACSSSMNAVTQGYHSILNGTSNMSIVGGVNFVIDVETIKGFSYLNMLSKTHGKCKAFDESGDGFTRGECAGVVVLKKLDDAIRDGNRIYCIINGISSNIDGNGIADKANFYSPSKQSQFNNINLAFKSTNGKISVNDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVVSLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRNNEKSVSMMINNFGVTGSNCCLLISEFKKQDYESYENNIGSINKNILVPFSANSPKSLDQYQSKIKNIINNQFNFIDFANNQIYSKSNYLYQRSVVIANNSNDLVNKILNKKHIQTKNPIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGYSVLEKLRSIGDDDTTSIHDPTIAQPAMCMFSVSLFELYKHWGVNPSFILGHSLGEIPTSYCSGMIDLDTFCYTVYQRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESKKSKVPTFSTVTTNLFNESDPFNSQYVYDNIINPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQKINLPLYQWDDELYFAQTQVLEQHRKEGPPIDHLGLSNSYYSPFKNSYRTFIDIKNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHTIEMPPKYNIEEIIKNKCTLARLTKNEIYTHIKSKTGLNYTAMFQGATECYIGVDCTLSVVSIESQTNSFLNIPILDSVFHGNISLINDQCQIVFDKVHGLKYYSSNIPNDYKDKSVYVYAKLKSKTSDSYSASFTVLLSDGTVVYEIDEAFSKSLIPIKELLKIEYPNDELFSINLQPKDSPIPAPSTFKSLIYENDRFNAEPPMVENLFQYISTIFYKNIINRCPEINIDIIKSLSIDEIISNFSKISKHERLFKYVFETIKENGILNSLEEKDDTYFVFNEVLIKSSRVISKLLFPLENDNDNEDTPQLLFQNGLMDKVYKCRYLKNKNQMIAHIIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIVDTKNKINKIIKGAGITNGLNVIYHPLTIDESLVELQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLIPNGQLLFVEPPYKSIICDSLFGSFEQWWAFTDTDIRKDHCCLSQDGWYKLLKWSNFESIEMSTESKFMGSVIQAQKPSFTSLINQQPKYDNIIIFGNNCPNFIDNIKPFSNFNEFIQIETIQEFDQLINKSTITNDSIIYFIKSINQLSLDNYKQATLEYIEINQKLLQINSLCKHVLIVNDSRKTNYLASSIVGAARYFDEFQQLKLHTLDFDYDSTQNYLISKNNKMVQFINNLIDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFEQQDNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINNKDYLVYSGLEGSVNSNTPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSNIIVNHERIQIKPSNISHIEAASIPIDYLTSFMSLFNVGCLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVNSDEIKQYLLNNYGDLITAIYSNTDKGYVSQIKNKLIEQGSNDNGVDLILNTLPSDFMDSNFQLLAINGRIIDLSNDHLNQSEYMKNVNFTLNRGYHNFDLMSQRNSRINRSLLTISKAIENGELKLIPIKEFSNSDINDAIEFIIEENRIDKIVVSHDHEVYQELYAKFSNENDFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQEIINIHSIFHFAFTQIACKVQEINMKHLDISHGAKTMGAINLHNQSIKRNWKLINFVISSSIASLVGSTDQCSYVCANALLDSFSKYRVSLGLPSTSINLGAIESTGFVSKNESISVFLDGSGIIPTPINQVLGLLDLQIQNPGKFTNSMVAKFNPLNFSNNEQINLLLKMDYIFNLHSNGYTKVKESAGSKNVDELFIKKISDLFSIDESKINKDIRLIDYGADSLVIVQLKNWVDQEIGFNLITIQQLQNNTINVSIKIILNFLKKINK", "length": 2512 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KS1-1", "protein_name": "DNA cross-link repair 1 protein", "gene_name": "dclre1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDDEDDINLYITRSKNNENKKTNKNRLIDNNIQKTKTTTAVLTTRTTTTTTTTTASTQLKWDYGDEDDDDYSAPKDIDEEQSSKQFNYQNNQIVVKQDHDDYSAPKDMDEEQSSRQFNYQNDQTLVKQDDDHDDYNEPKDIDSQSLIDEDCDFEFDNSDFFFDDGTTNNNDNNNKNNKNNNNNNNNNNNNNNYNNNNNKNYKRKYYQSYNNSNNINNNNNNNNDKFEKRLSDLKKTGKEEAKKRGYQVRKTPTKEKKIPPSFKVIDGTNFLVDGFQYKSEDFTHYFLTHFHSDHYVGITKTWSFGNIYCTEETGKLVSHKLGVDQRYIVKCEWNKLIEIQGVKVAFLDSNHCPGSALILFIIPLRNKDGEIIGEESILHTGDFRYNQSMNNYPLLKGRTISKLYLDNTYCDPQYVFPPQPEIIKQVASIVRKENDGETLFLFGTYVIGKERILLEIAKQEGKPVHVSNEKYAILCCLSTCLDINKFTTNELITPFRAVTMSMLSYHNMLSLLDSSNNKYKRVIGFRPTGWTQAKKSITYLNRGPTTFYSVAYSEHSSFNELRDCIDHFRPTQIIPTVDCDSPIKVKNILAHFSDLYEKKKQLTIASFFSAQPVTNFFQSFFKSKSEPIIDEDNKKLIPITTTTTTNINTLTATDTTTTKIKTSNTLIKDEFTDDLIWDCSDDLISDRKLLTQSDNSSALCKIEKEENFNDLSENNNNSNNNNNNNNNNNNNNNNNNNNNNNNNKLIIENDIKEEIIDFDDPVFISQQKWIEKQIYNNNNNSNNNNFTTPTKTNGNLSNNAKLNLTPTQTQTQTPTQNNKKQKTTNVSPTSYNSNNSSQQSGLKRSKSDPNVKKNQLQTSQPPSQSLITSFFQKCASPTSLFSATPPTPSITTTSNQSTKNKNSTTTTSTSTSNNKPFKN", "length": 920 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KX6-1", "protein_name": "TNF receptor-associated factor family protein DDB_G0272348", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFELEDITIEQSSFTNNNSNNNNNNNNNSNSNNNNNNNNNNINNNNNHNNNNKNNSNNKNEINNQLDIPISNLVVDKENISKKYFCTICSDLLVNSFHADKFKAVQCKNGHYTTCLNCWEKHLEKKKNCIQCGVDVESIESLSSNLLVTQKFTTFKIHCPNSFFDTIDFIKDEVNGCKEIIQINELEEHLKECQYGFISCKNCEEFSKLPFQEFTQCPDFRKNTKEQHDLICPYVKISCEYCGDIINKINKESHNANWCQEITIKCLDCHLPFKKKEINQHQKSFCPETIIQCRYSKGGCNAMIRRSKLSQHLTEGDNHHQFISNILNQQDLKINELELKNTEFCLLLNGQNKKITELEILFKELNDSILIQKQQQKQQQQQQQQQQQQQQQQQQQQQSQQQQSQQQQQSQQQQQSQQSQQNNNSNSHFINNNNNNINNVQMSDSPNGGSLPQAVYKNKWVISNYSEQEQQGISKDYIKSPLFKIGNSTFFLKWFPFGKKKLNYCSIFLYKTQDDKSIIVNYYIHLVNNQISDEVYEKRGCQKYDSENGSAGYGSSQFIKRADLLNDANGFLINDSITIEIEIFATEEILPLQS", "length": 595 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8BI41-1", "protein_name": "Syncytin-B", "gene_name": "Synb", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTGFWVLCFVLFPSSLSYPESWMPLVNLTHHILRDTNSSLFSNCWVCLSTQTQRSLAVPAPLSIWTDTPMKLHLTYSVRPFSGSFSISDIERRLRLFRPLTASYSFHNPDRRAIAFLQLVSSTGIFRIITRITSVIYPHKDRFFESAQRPLWGPLFTETVLRSQAPLCISRFFKVSAYATFVGNLSASLCNYTMHISPSTSHENLDLSTTHTFKQAMKRPDAKWKNPLRFSGPPSLIFSKPAYYPCPTDIKHCHTSPATPWMHCPQAPFGTCYNLTLFEPDNSTHPVTMSVNPTHFKVKLQGHRDPYPLSHYQPLTGAALSGQYSVWENEITVQENWDITSNIFSHLLSFSYAFCLNSSGVFFLCGTSTYICLPANWSGVCTLVFQYPDIELLPNNQTVPVPLFASVLSSDSVLRPKRSPHLFPFLAGLGISSALGTGIAGLATSTLYFQQLSKVLSETLEEIAASITTLQNQIDSLAGVVLQNRRALDLITAEKGGTCLFLQEECCFYVNQSGIVRDAARKLQERASELGQHSDSWGQWPDLGRWLPWLTPFLGPLLFLFFLLTFGSCLLNCLTRFVSQRLGSFVQDTAKRHVDSILQNFQYKKLPQDSPDEDTIPT", "length": 618 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BYG0-1", "protein_name": "Tetratricopeptide repeat protein 24", "gene_name": "Ttc24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSSRQYGLSDVLRALEESRKLADADRSTDQGLLGPFYNDLGMGYFQLQLFPLAVEAFLQALPLCRQPSEQATVLQNLGMTHNVLGNYWEAQEFHQKAASLHGSVGQRWEQGRSFSGLAFSLSQLGDHRAAWDSYLHALQAAQDTGDVKGQWQACEGLGAAAARLGQHDQALKYYKEALALCQHEPSSVRERLVAKLADAMRTFVAQEKIAQARFLPSAPGKLQTSRKAKTSARVQSSAEDAQESQWEGEASEGGHEKKEMEGLVNTATVLGPQRQNRATTHLPSGGPSPSGEEYPFIIAPKKLRVSRSSTWAKEALGRNFQRTRIQSGLCSIM", "length": 334 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1N8-1", "protein_name": "Alpha-defensin 22", "gene_name": "Defa22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKKLVLLSALVLLAYQVQTDPIQNTDEETNTEEQPGEEDQAVSVSFGGQEGSALHEKLSRDLICLCRKRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1P2-1", "protein_name": "Alpha-defensin 21", "gene_name": "Defa21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALILLAYQVQTDPIQNTDEETNTEEQPGEDDQAVSVSFGGQEGSALHEKLSRDLICLCRNRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C5Y2-1", "protein_name": "Mitochondrial sheath formation-associated protein", "gene_name": "Misfa", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVLGWMLFVGLATYMGTFPEAMPPTLKWKERLPGQENKARRRIQALEEELLL", "length": 53 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CDW1-1", "protein_name": "Protein FAM228A", "gene_name": "Fam228a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADTKTSKCDEHFSVEKLKEWPEPESVSLMELLAREDIDEAVHAVLFRENYVVKRLDTYLQHLAVFKERRKEMLHKKWVENVVQPLQQRITDKITSYRRPGKNQVKYEHCLKQTNKPTKVSSSCLFQKQQEFREAKGTSYQHGRGKTHDTQKEAKETEKGLSFTPFSLRPHCSSPRERQRASARLMQSKPGGRNRYKGASSEKPVFTLKSHLPKEEKTVSRSQLVFERQFRASRLSQDIKEAEKKGLVVGTGPQRPRSWAAADSVPRPSLVGRRVMTAEILGEHLVSLHQAARSGLQWP", "length": 299 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CEK3-1", "protein_name": "Serine protease inhibitor kazal-like protein, minor form", "gene_name": "Spinkl", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSTWIKFLFILTLVLLPYSVFSVNIFAGPENVIKEPNCTMYKSKSECSNIAENPVCADDRNTYYNECYFCIEKVVEKLKYRYHGICIYK", "length": 90 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8K072-1", "protein_name": "Receptor expression-enhancing protein 4", "gene_name": "Reep4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVSWMICRLVVLIFGMLYPAYASYKAVKSKNIREYVRWMMYWIVFAIFMAAETFTDIFISWFPFYYEFKMAFVLWLLSPYTKGASLLYRKFVHPSLSRHEKEIDACIVQAKERSYETMLSFGKRSLNIAASAAVQAATKSQGALAGRLRSFSMQDLRSIPDTPVPTYQDPLYLEDQVPRRRPPIGYRPGGLQGSDTEDECWSDNEIVPQPPVRPREKPLGRSQSLRVVKRKPLTREGTSRSLKVRTRKKAMPSDMDS", "length": 257 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8MP30-1", "protein_name": "Uncharacterized histidine-rich protein DDB_G0274557", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKYFLVLLVGFLLVLPSIVNPYRKGVTITNQQPKINIYQLDVNNPHNPNNNPHNPHNPNNNPHHPHHLHHHHHHHHHHHHHHHHHHHHHHHHHHPHHPHHHPHHHHHPHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHPHHHPHPHPHPHPHPHLHPNPHPHPHPHPHPHPHPHHHPNPNPHPHPHPHPHHHHHHQEASECLSYQGNRNRLFIKRDY", "length": 233 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8NG83-1", "protein_name": "Olfactory receptor 2M3", "gene_name": "OR2M3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARENSTFNSDFILLGIFNHSPTHTFLFFLVLAIFSVAFMGNSVMVLLIYLDTQLHTPMYLLLSQLSLMDLMLICTTVPKMAFNYLSGSKSISMAGCATQIFFYTSLLGSECFLLAVMAYDRYTAICHPLRYTNLMSPKICGLMTAFSWILGSTDGIIDVVATFSFSYCGSREIAHFFCDFPSLLILSCSDTSIFEKILFICCIVMIVFPVAIIIASYARVILAVIHMGSGEGRRKAFTTCSSHLLVVGMYYGAALFMYIRPTSDRSPTQDKMVSVFYTILTPMLNPLIYSLRNKEVTRAFMKILGKGKSGE", "length": 312 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8NGV6-1", "protein_name": "Olfactory receptor 5H6", "gene_name": "OR5H6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MFLYLCFIFQRTCSEEMEEENATLLTEFVLTGFLHQPDCKIPLFLAFLVIYLITIMGNLGLIVLIWKDPHLHIPMYLFLGSLAFVDASLSSTVTPKMLINFLAKSKMISLSECMVQFFSLVTTVTTECFLLATMAYDRYVAICKALLYPVIMTNELCIQLLVLSFIGGLLHALIHEAFSFRLTFCNSNIIQHFYCDIIPLLKISCTDSSINFLMVFIFAGSVQVFTIGTILISYTIILFTILEKKSIKGIRKAVSTCGAHLLSVSLYYGPLTFKYLGSASPQADDQDMMESLFYTVIVPLLNPMIYSLRNKQVIASFTKMFKSNV", "length": 325 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8R264-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r215", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNWNNIIHTIIFLSLTGPGIVGNMLIFIRHIYMPALGTEKKPVDLIVIHLAFSNMITICTTGIKDIATVFYFRNFLGDIGCKAVVFLARMARGLSICTTCLLSVVQAITISPRTSLWTKLKPQTACQIIPFILVFWIFNGLISSNLLSYIKGGSSLNRSVAATFIGHCYMLQSRHTIKWIFLSLMTLRDVIFQSLMGWSSGSMALNLYKHHKRVLYLYSSRFANNSPPEIRATWSVLILMTCFLLFYWADFILSFYHGFTVTHESILLNIKVFLELGYVSFSPYVLISRYIHPPNVFHAH", "length": 300 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R272-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLQFIKKTIFLFMTMVGILGNMSVSVHYMFSWWGSPEKKPIHLILTHLTFTNIILLLAKGLQKTIIVFGLRNFLDDIGCKIIVYLERVARGLSICTSSVLTVVQAIIISPRASGWRRLRPKSAWHILPFFSFFWILNAFISVNLIHSIRSKGMNTSQHKNSDDYCYLTPESQKIKWIVLPLMVLRDAVFQGAMGGASGYMVFLLHKHHQHVLYLQNSKLLYRTPPELRAAQSVLLLMLCFLFFYWTDCALSLFLSLSLGDSSLMINIQGFLTLGYAIFSPFVLIQRDGLIPVCWHAQ", "length": 298 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R278-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r213", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLALRNYIQINTPWCMCLFVTPLTPCLPEYWDPDSLRVEGPTESSLRHNTASCTLKNTIMQNVQFRSMSSITDAFFKMYLHTRKEEMILKILKEITFLIMTVLGILGNMSVSVNYMFSWWGSPEKKPIHLILIHLIFTNIIILLVKGLPKTIAAFGLRNFLDDIGCKIIVYMERLARGLSICTSSLLTVVQAIIISPRASGWRRLRLKSAWHILLFFLFFWILNALISVNLIHSTTNTRLNVSQLKSDDNYCYFMLPIQKIKWIVLPLMVVRDAVFQGAMGGASGYVAFLLHKHHQHVLYFQNSKLLYRTPPELRAAQSVLLLMLCFVFFYWTDCAFSLFLTLSSEVNILMVNTRDFLTLGYATFSPFVLIHRDGLLVECRHVQ", "length": 384 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2A9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r229", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDFGNLAMGIVLSLQSALGILGNFSLLFYYLVLYNKERTLKIIDIILIHVFTSNSLIIFSKGLPEVLAVFGWNDLFDDVGCKLIMYVRRVSRSMSISMTCLLSVFQAITISTRNSCWKEFKEQTAKFMGLFISLCWILFMLVNMLFPVYTSTNRNSKNKTQKKDIEFCHSVGRDKMVDIMYTAFCVFPEVLFSLLIVSSSTTMIVILYGHKKRVQHILHTHASPRTSAENRATQTILILVCTFLAFYTLSSVLQGYVALSHDPSWWVMNITTIISMGFPAIGPFVMSRDFTVSRFCFTCIGNLKLP", "length": 306 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r178", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHDKSLKTTDDMTLQILLLCQFVVGTVANVFLFLHNISPVLTGSKQRPRQLILSHMSVANALILFLTSFPDMMAFAPRNSPTHLKCKLEYFSRLVARSTNMCSTCVLSIHQFVTLVPVNRGKAILRASVPNLTSYSCYSCWFFSVLSNIYIAIKVTGPQITDNNTDSKSKLFCFTSGFSVGIFFLRIFHDGTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNFICIIFYTFSIDSRLFMSHFSKVFAAGFPTISPLLLIFRDPKYPCSVLFNC", "length": 304 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r64", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKTLKTMEVLALQILLLCQVVVGTVGNIFLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLFAYSYDLIDFVPRKPPTDLKCKLAYFFNMVAQGTIMCSTCLLSTYQFVTLVPGNWARVMFREISPKVVSYCCYSCWLFSVLNNAYMPMYVSGPQKTHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFIGIMAWTSVSMVIHLNRHHHRMHYLHNPNQINRGHAETKAAHTIMMLVVTFVSLYILDCICSLFHISFVESRLWLIDVIELLHLSFPTVSPFLLICRDPMGPCSLLFIVGLEIHVTVGAITEEQ", "length": 320 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r59", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDFVPRKPPTDLKCKLAYFFHMVAQGTIMCSTCVLSTYQFVTVVPGTWARVMFREISPKVVSYSCFSCWLFSVLHNAYIPMNVSGPQKTHNDSDSKGNSICSISGVNVDMHFLRFSHDIIFLGIMAWTSVSMMIHLNRHHQRMNRIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFHISFVESRLWSRHVIKVLALSFPTISPLLLIFRDPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2C0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r62", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALQILLLCHVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLFAYSYDLTDIVPRKPPTDLKCKLAYFFHLVARGTIMCSTCVLSTYQFVTLVPGTWARVMFSEISPKVVSYCCYSCWLFSVLNNAYMLMNVSGPQKSHNDSDSKSNSICSISGVSVDMNILRFSHDIIFLSIMAWTSVSMVIHLHRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFYISFVESRLWLRYVTKLLALSFPTISPLLLIFRDSKGHCSLHIMSVWKST", "length": 300 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R4R9-1", "protein_name": "Protein phosphatase 1 regulatory subunit 14C", "gene_name": "Ppp1r14c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSVVTGGGEAAGGTSGGGARVFFQSPRGGTGGSRESSSHSGSSREDSAPVATVAAAGQVQQQQRRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMPDVEIDIDDLLDADSEEERASKLQEALVDCYKPTEEFIRELLSRIRGMRKLSPPQKKSV", "length": 164 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8R4V1-1", "protein_name": "NFAT activation molecule 1", "gene_name": "Nfam1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESWLLRRGARVRCLHPPSWLPAWCFLCLLPVPQTLQLTGLVSLTHTSLPIMVSLANTDVFFSCRIEDFTRLQRDLPVKLFHTDIHGRRRWEKQINCQHRPGMENHTRDCMVKLSQANTSATGIYYFIVEGEETYQSDGVVILVRDTVYQPPAFKVQEALMLGFTSLMSVLGVLGTALLLWKKKQISVLGKHTAKTCSGLKSTVGTTKPPAESVYTSLQRRETEVYACMKEETGSPVFSQSPATKEKLNRFEDDNEFNLVYENL", "length": 264 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8T277-1", "protein_name": "5'-AMP-activated protein kinase subunit gamma", "gene_name": "prkag", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWYPGDEDEEFTSIIENIEKKETQEIKIKTEKLRQASLNQLPIEQSEGVGGGELSEYNNNTTNNNTPTNTTTTTNTNTTTMNNSNNNNERILSTSNGFDIRLPPNSIEQPSPSFISSSQDGVLTVDPLAVDGEKGNKESQSPPNGDNQILNNNNMFFKDITSLPSTDNKSSTNTNNNNNENPLKQTISSSPSKSTTTTTTSTSTTTTPSLSSLSSNNNNNSNSNNNYINHSSISTVSEGLENLNLKSGIKKIDSETEKYIEEGKQVFVNFLKGHTCYDVIPISGKVVVLDTKLAVKSAFYALEENGIKSAPLWNSEQHDFTGMITVSDFIDILLYYYKKPKSNNIFQDMGIHRIETFWREISVERPSSLISTEPETNLYDAASLLLCYKIHRLPVVDKKDTNSILHILTHSRILAFMMKSFPQLPEKLLSIPIGSLGIGTFATVVTVMTHTPLVEVLELLSEKKISAVPIIDSETSKIVDVYSKSDVTLMSKQGILSPSDLNLPVHQVLSTFTKLWQRPEQIYTCTRFDKLGDVIERCIKKRVHRLVCIDSSKKVEGILSLSDILNYLLNDVKSINH", "length": 577 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8VEU4-1", "protein_name": "Olfactory receptor", "gene_name": "Or14j2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVENITTMRGFLLMGFSDNHELQILQALLFLVTYLLGSAGNVIIITITTLDPQLQSPMYYFLKHLSILDLSSLSVTVPQYVDICLTQSGYISYAQCMLQIFFFTGFAWGEVAILTVMSYDRYVAVCLPLHYEVIMGPSKCRWAVTAVWLSSVIPGTLYIASIFSIRFCGDRIIHQFFCDVPQVLKFSCSDDYLVTVGVADFLSAVAFACFIGIVNSYVHIFSTVLRMPSAESRSKVFSTCLPHLFVVLLFLSTGIFAYLNPTSDSPTALQFLVSIFYTVLPPTLNPVIYSLRNETIKSVIRKLLLSSKFTG", "length": 312 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VFX0-1", "protein_name": "Olfactory receptor", "gene_name": "Or5b101", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENRTEVRCFILVGLTNDPSLQLPLSITFLLIYIITLIGNLGLILMILLDSRLHTPMYIFLGNLSLVDFCYSSTVTPKVIAGFLTGDKIMSYNACASQMFFFANFGDVENYLLASMAYDRYVAVCKPLHYATTMTTHMCASLVIGCYICGFLSASIYTMDALSLSFCESNVIHHFFCDVLAVMIVSCSDSHVNELILIYVVSFNMFFALIIILISYMFIFTNILKIHSSAGYHKAVSTCASHFTAVSIFYGTIIFMYLQPSSSHTMDTDKIASVFYTMVICMLNPLVYSLRSKDVKSAFTKIVLRSK", "length": 307 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VY69-1", "protein_name": "Vesicle-associated membrane protein 723", "gene_name": "VAMP723", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEMLGSSESQPQAFYIKRTQMKRKKWFQNMKIKLIVLAIIIALILIIILSVCGGFNCGK", "length": 217 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ67-1", "protein_name": "Uncharacterized zinc finger CCHC domain-containing protein At4g19190", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGEGEGSGIRLSKRFAGGKVTGGSLEVDYKTKSGTAWSHSFLNQKPWHPLSYPNQRRKWIAEQTHAQHDRRAEEVAREFAQEQEFFKQAALISKKEREKIETMKAVSFMYVRPPGYDPESAKAAEYKDEKHKGQGSSTQDPVADDNVGSRPEESQGGGERTQERKKPRPKDVFGRALPTEEEFEVLKNAPRMETGIPGRVKPFAVEVRNVKCLRCGNFGHQSGDRDCPLKDAVMPNEELRLKRDDPLTAIIAHTDPSEPLKWELKQKPGLSPPRGGFDPDDPNQQIVAEDIFDEYGGFLEGSIPIEILKSMSSDKKRKSKKNKRHKKHSSRTVEETDESSTGSEDSREKRGSKKRKKLKKKSKKQYDSDSLSFEGSGSDSYRLSRRRHTKHVDPSASLKSEVYHQGNSHREKHYYDEKHQKRKEIVDRPSASSDDSDYYRSNSSRKKRSEDDYKSHHRERKQVHSNDPVSEKSQKQHYSESGKIQRVEKEHRYDERRHRYVDMESENRNRSEKKPRYDDRDSEKHHRSVKGKEKHVYEASDDPEEFSDRYRSTKKTESDSESNRRSRKKKHELSSEEEEGESRKHRYSTNRRRN", "length": 595 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q91V82-1", "protein_name": "Beta-defensin 8", "gene_name": "Defb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRIHYLLFTFLLVLLSPLAAFSQKINEPVSCIRNGGICQYRCIGLRHKIGTCGSPFKCCK", "length": 60 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q923B3-1", "protein_name": "Neurotrophin receptor-interacting factor 1", "gene_name": "Nrif1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASTLPTTWPHESVKFEDVSLTFTEEEWAQLDFQQKCLYREIMMENYSNMISVEHHFSKPNVISQLEKAEDCWPMQREIPQDTLPECSWPSPDPGMNSFPSKSPLMKIEVVEVLTLNKDVAGPRNALIQSLYPEDLNPGNLKPAQQPSKRLTDTEASRQKFRHFQYEESAGPQKAMSQLRKLCHQWLQPNTRSKKQILELLVLEQFLNALPEKFRVWVESQHPEDCKAVVALLENMTSVSKDDASLACSSEATDQLKEKRKGVATLPVTFAAEVPAEEPVTFQDVAVDFNEEEWRLLGPTQKTEYHDVMLETLGNLVSVGWEPTLGNRELTPDSPIPVVKPIHDPNTNDLSRNGTQSTVFESILEDGVKEMHSIESNQVGNLQEKGHPQKKFSESSKSQDQTSRHKSQGSLNEVLPRKYVKVKQKGTGKRKGRTNTISMTRGLRIRKQQKDSVEWQGRSGSTPVTHGSSIKKQQQGSEQGKPGTSRDPITLTVPAKVYQKATGSEESIFMDSSDAMVPDVPPKIHQKGPEWHKVGESNNSMLQGSSVQNHQMESGAGRASDNSLLTHALPVKSHQKGYKEGNVQGNRNSWKHIKPHQKGSKGERVEELSTSEKHVPYVKNHLKTSERGKDREINASIKCDPYIKTYYRGSDVGRLRRANNCRKAFSLHAQQISFIKIHKGSQVCRCSECGKLFRNARYFSVHKKIHTGERPYMCMACGKAFVQSSSLTQHLRIHSGERPFECSECGRTFNDRSAISQHLRTHTGAKPYHCERCGKAFRQSSHLTRHERTHTGERPYVCIKCGKAFTQSSHLIGHQKTHGIKFKKQPKL", "length": 828 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q924S2-1", "protein_name": "Inactive 2'-5' oligoadenylate synthetase 1C", "gene_name": "Oas1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENGLCSIQARELDEFICDYLFPDTTFLTELRADIDSISAFLKERCFQGAAHPVRVSRVVMGGSYDEHTALKGKSEAKMVLFFNNLTSFEEQLKRRGEFVEEIQKHLCQLQQEKPFKVKFEVQSSEEPNSRSLSFKLSSPELQQEVEFDVQPAYDVLYELRNNTYAEPQFYNKVYAQLIHECTTLEKEGDFSICFTDLHQNFMRYRAPKLWNLIRLVKHWYQLCKEKLREPLPPQYALELLTVYVWEHSNKNQEKVTTAKNFRTFLELVAYYKNLRIYWTWYYDFRHQEVCAYLCRQLKKARPLILDPADPTRNVAGSDLQAWDLLAKEAQTWMQSSCFRNCDMSFVPTWDLSPERQECAFQ", "length": 362 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q925U0-1", "protein_name": "Oocyte-secreted protein 1", "gene_name": "Oosp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKPFVGLLGLLLLLSFMKTCADDWTAISLQCADHWFHLRIRPTIFHNIFMEPDEVFLGIGCPVTTTWPNDTYEFIYRTYSCGIANKVLCDVTLLKTQLTYISKNASLQAEMSLSCVMHNQSPHFCEAESRGDFTGDPPGWTEDMRARRDEQTVPMVQPNLSTSSEDHHVSTEPWASETSRSEAAEVPSFMDQNFSVFHFSRM", "length": 202 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q94490-1", "protein_name": "Ubiquitin conjugating enzyme E2 B", "gene_name": "ubcB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MAAHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVFSTWSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKEWTKKYAK", "length": 148 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q945S5-1", "protein_name": "Vacuolar cation/proton exchanger 4", "gene_name": "CAX4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSISTESSSNLSLLENGGGGSDKPTAETSRRVRRTVSASSLIRKRSDLKLISRVRWEFMRRILTNLQEVLLGTKLFILFPAVPLAVVAHRYDCPRAWVFALSLLGLTPLAERISFLTEQIAFHTGPTVGGLMNATCGNATEMIIAILAVGQRKMRIVKLSLLGSILSNLLFVLGTSLFLGGISNLRKHQSFDPRQGDMNSMLLYLALLCQTLPMIMRFTMEAEEYDGSDVVVLSRASSFVMLIAYLAFLIFHLFSSHLSPPPPPLPQREDVHDDDVSDKEEEGAVIGMWSAIFWLIIMTLLVALLSDYLVSTIQDAADSWGLSVGFIGIILLPIVGNAAEHAGAVIFAFRNKLDITLGIALGSATQIALFVVPVTVLVAWTMGIEMDLNFNLLETACFALSILVTSLVLQDGTSNYMKGLVLLLCYVVIAACFFVSNSPSSKLLF", "length": 446 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96AK3-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3D", "gene_name": "APOBEC3D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNPQIRNPMERMYRDTFYDNFENEPILYGRSYTWLCYEVKIKRGRSNLLWDTGVFRGPVLPKRQSNHRQEVYFRFENHAEMCFLSWFCGNRLPANRRFQITWFVSWNPCLPCVVKVTKFLAEHPNVTLTISAARLYYYRDRDWRWVLLRLHKAGARVKIMDYEDFAYCWENFVCNEGQPFMPWYKFDDNYASLHRTLKEILRNPMEAMYPHIFYFHFKNLLKACGRNESWLCFTMEVTKHHSAVFRKRGVFRNQVDPETHCHAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPECAGEVAEFLARHSNVNLTIFTARLCYFWDTDYQEGLCSLSQEGASVKIMGYKDFVSCWKNFVYSDDEPFKPWKGLQTNFRLLKRRLREILQ", "length": 386 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q99N64-1", "protein_name": "Germ cell-less protein-like 2", "gene_name": "Gmcl2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9C7P4-1", "protein_name": "Putative zinc finger CCCH domain-containing protein 9", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MADAGDNQQEAERRSDETESRSIKEPKEKEDEDENPQDQIQSKERMRQSSPYPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQRPQELPVRICKHIMDRNVAEPMYQDWRESESERRFDERTQRTFGDERTQRRYGIEYSGARPEKRSKIVPDFQMRDPRHHDTEWRFERERMERIERQRREAEENLQEQRQRDSIERQRREAEENLQEQRQRDSIERQRREAQENLQQQRQRDSIERQRREAQENLQQQRLQDMPENHNVDDQQNLQEQRRISIEKERTEARLRLEQIRPTVSFPINEFIRAVVLLRELIENWDDKAWKK", "length": 321 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8M4-1", "protein_name": "DNA-directed RNA polymerase subunit 12-like protein", "gene_name": "NRPB12L", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLQQSETDDKQPEQLVIYVCGDCGQENILKRGDVFQCRDCGFRILYKKRILDKKETRIGV", "length": 61 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CQK8-1", "protein_name": "Small proline-rich protein 2A1", "gene_name": "Sprr2a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CWP4-1", "protein_name": "Lymphocyte antigen 6K", "gene_name": "Ly6k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAFLVALLVVLGLQLVQSNALTCHVCEAQNSYACSNPSQCPGEKKFCLLAVTRIFERFFYVSKQCTRRCPTPVVSPPSTNPPSEPKEFLIEKPMPFLFYKCCQWDSCNGEGPPTDQLLKEQPGKASGRRHRYIELLLTGFMVLTANGLSALCLL", "length": 154 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D541-1", "protein_name": "Coiled-coil domain-containing protein 7A", "gene_name": "Ccdc7a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKCAKHPSTISMKLTSVPELPYKKGLLNSSPKPKEKHNAKSKYGKNESMVLRSPPTGESIVRFALPIPLSKTKDKISADEMVRRITTNLKMVVSNLEDTYGACYDNGEKAAEKSEAEGLSIGDDVSSFLLCCSQFTSQLEEAVKEECGALESLYKWFQQQVNQMEEISKDQSNLEELQSDGKTASLNIVQIAKLARKFEDFKSRLKTRKEVMQTKNEDKEIMAETLKHYGLMEKQIEEFITSHSALESQTETESQSGTPSVTTRMARMIKIFENQSTMLEKALNDQQTIESKYKQLETDFQMLIMEKTLLEAEIRRLREIERVKSAAKEEQTKKSGKSEKKKFKEKEKNLSPNREFKSIEELLQIQKEAELLKTEKKTLQGQLKWALEEAERNKTQLEFVLHQKMEMFKEESKTKVGQSQNKSKVKIEDSKDSLPKKSDTQLGGQRKDQISSDQSKRPKKKQLADIDPSAVEDFPPETFKSFTVMPLIEEHRESISSQPKEEMAKASEQSEAEDIEGPLEIPSESSNEDDDLLPEDESPMMEQVTDVGRYKSIYISAEPIDTMSLISRTQSEMETLEAINYDNVLNEGEEQDKKIGKDSDTGRKSKRKRSSKIRKLSTHEEESDIVHYEEATKAKVPSKKRASDPYGDEAYESRGSVSKAQTYTKKQGTHQRGRGSASDAYGDEAYESRGSISKAQTYTRKQGTHQRGRGSVQEEESDTVHYEEVTRAKVPSKKQASDPYGDEAYESQGSVSKAHTHTKKQGTHQRGRGSVHEEESDTMNYEVPRKSKISSRRKGFALPITHQVEMHSSESQGSISKSNTETKKQGTHKRGRDSDADGARTPVSQGSDSKADTERKKHRSKEESTISKDSIPVLDEVQDKTFEHQESGLRLEVQAKKLTFSSQNIHNEESATDIKVEYQNVPSSSQVQLKKQKPLGGEIFTTHFVVPAESHAQLYQTHTPETQIERGTTSGTARLTTIPVEHPKKEASPDNLFPEKKLYITRAPTQTKKQYPPWDAKAETQKKTVKEVQGISEPQTKLNPTMSGIILHLDMDRVVETDLENLEETIVPHVLRSELEIGTDAKNMPETPTSREAVRTEAKGNQDVTISIAKGMKLIGKLKDQHGLSSFASKDTISPGKSLIKSSRDNQDDSLLETKPQENTSDKYHPSKTFPTKVINMLPFSEKSLGSTSANVDVAPKPVYRASRGRSRISKALQQLLKTSEHLKPTSTKNQNADLEKHLYISVRSANKHTQKDKKHGQSNNQKLKKQGALSSTKKQKHKEQPKTETIVENNDKFDDNLMMTTSSPNIKIIKELSKTLNLDGGDIELSDFVFKTASAAKKLENKGPSKTKNLNKESSRDIHILHLTTSAIRTLLLDEEAKIRSLEKKLMKQSTILQKSVSSMKKFMFEEPSRETKMKRKKREKRKIVVKSPHILPITTTQKHTIKEKSEISNLEKPIVRGTDILKKSTSARKKRVLKGKSKSATLPKKCDNFPFDLVRSSSDSSKQEVEEQPKPGNVDKKVSDDSYSPDISTTPTKKHTLKGQSKSRTIYEKGVDLPNNLVLSKSASSIQEFEEQPQPGNVDKKVSDDSYSPDISTSPTKKHTLKGQPKSENSDEKGIKRPNNLHMSASVARKRLLKALSTIP", "length": 1642 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D5R2-1", "protein_name": "WD repeat-containing protein 20", "gene_name": "Wdr20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATEGRGKETNEIKTHFTTREGLYRLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQTGNGNRLCFSVGRELYVYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSDSLFLVAHSSGNMYSYNVEHTYGTTAPHYQLLKQGESFAVHNCKSKSTRDLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSAELHGTMKSYFGGLLCLCWSPDGKYIVTGGEDDLVTVWSFLDCRVIARGRGHKSWVSVVAFDPYTTSVEESDPMEFSDSDKNFQDLLHFGRDRANSTQSRLSKQNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARAHANVMNATGLPAGSNGSAVTTPGNSVPPPLPRSNSLPHSAVSNAASKGSVMDGAITSGVSKFALLSLHDRKERHHEKDRKRNHSMGHISSKSSDKLNLVNKAKTDPAKTLGTSLCPRMEDVPLLEPLICKKIAHERLTVLVFLEDCIVTACQEGFICTWARPGKVSKFQP", "length": 567 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAF8-1", "protein_name": "Uncharacterized protein C4orf51 homolog", "gene_name": "", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTHFLYLTPEILLPFSPLTSTEFELIRRKAQQLWQDETRWSASSMTTYSGSYREKQLDEATCNRLAQRVGQPQFEYKPTPLPGSSAYNTLPGHAGSQEAADGKGRLPDIASPSRDSPLNIKHKVAHQIWGSEVPCPTFLAYRGLRMSPCMQPKKPGFELLMSYRNRGKALLKRLQRQWDYESKLGSSEDSGTDRFSSNTSGSSGRKFK", "length": 208 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPV9-1", "protein_name": "Beta-defensin 5", "gene_name": "Defb5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKIHYLLFAFLLVLLSPLAGVFSKTINNPVSCCMIGGICRYLCKGNILQNGSCGVTSLNCCKRK", "length": 64 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPX4-1", "protein_name": "P2Y purinoceptor 12", "gene_name": "P2ry12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVPGANATSANTTSIPGTSTLCSRDYKITQVLFPLLYTVLFFAGLITNSLAMRIFFQIRSKSNFIIFLKNTVISDLLMILTFPFKILSDAKLGAGHLRTLVCQVTSVTFYFTMYISISFLGLITIDRYLKTTRPFKTSSPSNLLGAKILSVAIWAFMFLLSLPNMILTNRRPKDKDITKCSFLKSEFGLVWHEIVNYICQVIFWINFLIVIVCYSLITKELYRSYVRTRGSAKAPKKRVNIKVFIIIAVFFICFVPFHFARIPYTLSQTRAVFDCNAENTLFYVKESTLWLTSLNACLDPFIYFFLCKSFRNSLMSMLRCSTSGANKKKGQEGGDPSEETPM", "length": 343 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9ER80-1", "protein_name": "Receptor-transporting protein 4", "gene_name": "Rtp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLFPDDFSTWEQTFQELMQEEKPGAKWSLHLDKNIVPDGAALGWRQHQQTVLGRFQCSRCCRSWTSAQVMILCHMYPDTLKSQGQARMRIFGQKCQKCFGCQFETPKFSTEIIKRILNNLVNYILQRYYGHRKIALTSNASLGEKVTLDGPHDTRNCEACSLNSHGRCALAHKVKPPRSPSPLPKSSSPSKSCPPPPQTRNTDFGNKTFQDFGNRTFQGCREPPQREIEPPLFLFLSIAAFALFSLFTR", "length": 249 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9FFP9-1", "protein_name": "Serine/threonine-protein kinase SRK2H", "gene_name": "SRK2H", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDKYEVVKDLGAGNFGVARLLRHKETKELVAMKYIERGRKIDENVAREIINHRSLRHPNIIRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEAEARYFFQQLICGVDYCHSLQICHRDLKLENTLLDGSPAPLLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKHADVWSCGVTLYVMLVGGYPFEDPDDPRNFRKTIQRIMAVQYKIPDYVHISQECRHLLSRIFVTNSAKRITLKEIKKHPWYLKNLPKELTEPAQAAYYKRETPSFSLQSVEDIMKIVGEARNPAPSSNAVKGFDDDEEDVEDEVEEEEEEEEEEEEEEEEEEDEYEKHVKEAHSCQEPPKA", "length": 360 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLZ3-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN12", "gene_name": "KIN12", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGSSEKTTNKLVSILPNYRIGKTLGHGSFAKVKLALHVATGHKVAIKILNRSKIKNMGIEIKVQREIKILRFLMHPHIIRQYEVIETPNDIYVVMEYVKSGELFDYIVEKGKLQEDEARHLFQQIISGVEYCHRNMIVHRDLKPENVLLDSQCNIKIVDFGLSNVMHDGHFLKTSCGSPNYAAPEVISGKPYGPDVDIWSCGVILYALLCGTLPFDDENIPNVFEKIKRGMYTLPNHLSHFARDLIPRMLMVDPTMRISITEIRQHPWFNNHLPLYLSIPPLDTIDQAKKIEEEIIQNVVNIGFDRNHVVDSLANRIQNEATVAYHLILDNRNQNSVPNDPFQSKFKEISDGIFNSTLPVQNITSHVGHSFSALYGLKSNVKDDKTWTLGLQSQGSPYDIMTEIFKALQNLKICWKKIGLYNIKCRWVRSFAYYKNHTIEDECAIILPTVIKFEIQLYKVREGKYLLDILRIDGPQFIFFDLCVAFLRELGVL", "length": 494 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FVV4-1", "protein_name": "DEAD-box ATP-dependent RNA helicase 55", "gene_name": "RH55", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDSSPPNTIIEEAPPRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVARAVRLDFAKCREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQAVADLAKAGLRNPYLKCEADQKSSQLVHLLIENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIVYIRSLAIKDREVLEKGLKAFVSFVRAYKEHQCSYIFSWKGLEIGKLAMGYGILSFPYISEVKQDRIGIVGFTPVQGITFEDIKFKNKSREKQRQQNLLARKDKLQQEKRGKRKKSSKEAVDDSNKASRKRKLTGRQRQTIQTAQDEEEMNLRL", "length": 465 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9JI02-1", "protein_name": "Secretoglobin family 2B member 20", "gene_name": "Scgb2b20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACLPFFEGYASVLSGSRVWLYQELQAFNATAEEKVALEKIQDCFSEERIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JJQ7-1", "protein_name": "X-linked lymphocyte-regulated 4B", "gene_name": "Xlr4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSNDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKRVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JLV9-1", "protein_name": "Prolactin-2C5", "gene_name": "Prl2c5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPSLIQPCSWILLLLLVNSSLLWKNVASLPMCAMRNDRCFMFFEDTFELAGSLSHNISIEVSELFTEFEKHYSNVPGLRDKSPMRCHTSFLPTPENKEQARHIRYEALLKSGDMILDAWENPLDYLVSELSTIKNVPDIIISKATDIKKKINAVQNGVNALMSTMNGDEENKNPAWFLQSDNEDARIRSSYGMISCLDNDFKKVDIYLNILKCYMLKIDNC", "length": 222 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9LJY9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 18", "gene_name": "CYP705A18", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATLISVDFQHCFMYIILLCLFSLLCYSLFFRKPKGTRVGCDLPPSPPSLPIIGHLHHLLSSLTHKSLQKLSSKYGPFLHLRIFSVPIILVSSASVAYEIFKAHDVNVSSRGAAAIDESLLFGSSSFIYAPYGDYWKFMKKIFATKLLRPQVLENSRGVRAEELKRFYRRILDKARKNENIEISKESAMLMNNILCRMSMGRSFSEENGEAERVRGLVGESYALVKKIFFAATLRRLLEKLRIPLFRKEIMGVSDRFDELLERIIVEHKDKLEKEHQVMDMMDVLLAAYRDKNAEYKITRNHIKSFFVDLFVGGTDTSVQTTQWTMAEIINNPNILQTLRKEIDSVVGKSRLIHETDIPNLPYLQAVVKEGLRLHPPGPLLIRTFQERCEMKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLSYSRSGQEDEKEQTLKYLSFGGGRRGCPGVNLGYIFVGTAIGMMVQCFDWKIEGDKVNMEETYGGMNLTMVNPLKCTPVPRTQPFSFTSNLEILSS", "length": 524 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSY1-1", "protein_name": "SKP1-like protein 8", "gene_name": "ASK8", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSTKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKHHVDAANPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE", "length": 152 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTG5-1", "protein_name": "Callose synthase 4", "gene_name": "CALS4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MNQPNRGQILQTVFSHFFPVASPDSELVPSSLHEDITPILRVAKDVEDTNPRSLFLQDLDIKSVDDSINILSGHSHALDKANELDPTSSGRDVRQFKNTILQWLEKNNESTLKARQKSSDAHEMQSFYQQYGDEGINDLLNAGAGSSSSQRTKIYQTAVVLYDVLDAVHRKANIKVAAKILESHAEVEAKNKIYVPYNILPLDPDSKNHAMMRDPKIVAVLKAIRYTSDLTWQIGHKINDDEDVLDWLKTMFRFQKDNVSNQREHLILLLANVQMRQTQRQPNLLDDRALDTVMEKLLGNYNKWCNHVGLESSLRFPKDKQQKVVQQRKLLYTGLYLLIWGEAANLRFMPECLCYIYHHMAFELFEMLESKGSKKKYKPKNPTYSGKDEDFLTKVVTPVYKTIAEEAKKSGEGKHSEWRNYDDLNEYFWSKQYLDKLGWPMKANADFFCKTSQQLGLNKSEKKPDLGDGCVGKVNFVEIRTFWHLFRSFDRMWSFYILSLQAMIIIAWNETSESGGAVFHKVLSVFITAAKLNLFQAFLDIALSWKARHSMSTHVRQRYIFKAVAAAVWVLLMPLTYAYSHTSIFIVAILIYLSPNMLPEMLLLIPSIRRTLEKSDFRPVKLIMWWSQPELYIGRGMHESAWSIYKYMMFWIVLLTSKLAFSYYVEQIKPLMGPTKEIMSVPMPGYWLPEFFPHVKNNRGVVITLWSPVILVYFMDTQIWYAIVSTLVGGLYGAFRHIGEIQTLGMLRSRFQSLPGAFNACLIPNENTKEKGIKLAFSRKCHKIPNTNGKEAKQFSQMWNTIINSFREEDLISNRELELLLMSCWAYPDLDFIRWPIFLLASKIPIAVDIAKKRNGKHRELKNILAEDNCMSCAVRECYASIKKLLNTLVTGNSDLMLITTVFTIIDTHIEKDTLLTELNLSVLPDLHGHFVKLTEYVLQNKDKDKIQIVNVLLKILEMVTKDILKEEIKRLHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMEMPGAPKIQNMLSFSALTPYYSEDVLFSTFDLEKENDGVSILFYLQKIFPDEWKNFLERVKCGTEEELDAIDYLKEEIRLWASYRGQTLTKTVRGMMYYQKALELQAFFDLANERELMKGYKSAEASSSGSSLWAECQALADIKFTYVVACQQYSIHKRSGDQRAKDILTLMTTYPSLRVAYIDEVEQTHIYSKGTSENFYYSALVKAAPQTYSTDSSDSGHMLDQVIYQIKLPGPPIIGEGKPENQNNAIIFTRGEALQTIDMNQDYYIEEAFKMRNLLQEFLEKNGGVRYPTILGLREHIFTRSVSCLAWFMSNQEHSFVTIGQRVLANPLKVRFHYGHPDVFDRVFHLTRGGVSKASKVINLSEDIFAGFNSTLREGTVSHHEYIQVGKGRDVGLNQISMFEAKIANGSGEQTLSRDLYRLGHQFDFFRMLSCYFTTVGFYFCSMLTVLTVYVFLYGRLYLVLSGVEKELGNKPMMMEIILASQSFVQIVFLMAMPMIMEIGLERGFYDALFDFVLMQLQLASVFFTFQLGTKFHYYCKTLLHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKATELGILLLVYHIFGPTYIGLFTISIWFMVGTWLFAPFLFNPSGFEWHEIVEDWADWKKWIEYDNGGIGVPPEKSWESWWEKDIEHLQHSGKWGIVVEIFFALRFFIFQYGLVYQLSAFKNKYSSLWVFGASWLLILILLLTVTVLDYARRRLGTEFQLLFRIIKVSLFLAFMAIFITLMTCRLILPQDVFLCMLALIPTGWGLLLIAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAFSRGLHISRILSGQRKHRSSKNKD", "length": 1871 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LU95-1", "protein_name": "Pyruvate kinase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEMLLGGQATNGALRSKTKIVCTLGPASRSVEMIEKLLKAGMNVARFNFSHGSHSYHQETLDNLRTAMDNTGILCAVMLDTKSPVIRTGFLKEGKPIQLKQGQEITISIDYKIQGDSNTISMSYKKLAEDLKPGDVILCSDGTISLNVLSCDKYLGLVRCRCENSALLGERKNVNLPGIVVDLPTLTEKDKEDIMQWGVPNKIDIIALSFVRKGSDLIQVRKLLGEHSKSIMLMSKVENQEGVMNFDKILENSDAFMVARGDLGMEIPIEKMFLAQKTMINKANAHGKPVVTATQMLESMTVSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAHPETAVLTMSRICKEAEDFIDYDILHKKTLGMVSLPLSPIESLAASAVSTARSVFASAIVVLTRGGYTAELVAKYRPSVPILSVIMPEIAECSDSVAHVARRGLIYRGIIPVVGCSARDSTEEMIRLAIGFAKTKGICKTGDSIVALHKIDGSSIVRIVSVE", "length": 497 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LX08-1", "protein_name": "Annexin D6", "gene_name": "ANN6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASLKIPANIPLPEEDSEQLHKAFKGWGTNEGMIISILAHRNATQRSFIRAVYAANYNKDLLKELDGELSGDFERVVMLWTLDPTERDAYLANESTKLFTKNIWVLVEIACTRPSLEFFKTKQAYHVRYKTSLEEDVAYHTSGNIRKLLVPLVSTFRYDGNADEVNVKLARSEAKTLHKKITEKAYTDEDLIRILTTRSKAQINATLNHFKDKFGSSINKFLKEDSNDDYVQLLKTAIKCLTYPEKYFEKVLRRAINRMGTDEWALTRVVTTRAEVDLERIKEEYLRRNSVPLDRAIANDTSGDYKDMLLALLGHDHA", "length": 318 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXS7-1", "protein_name": "Citrate synthase 1, peroxisomal", "gene_name": "CSY1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEISERARARLAVLNAHLTVSEPNQVLPAIEPWCTSAHITAAPHGSLKGNLKIVDERTGNEYQVPVSEHGTVKTVDLKKITTGKDDKGLNLYDPGYLNTAPVRSSISYIDGDEGILRYRGYPVEELAEKSTYTEVTYLLIYGNLPSQRQLADWEFAISQNSAVPQGVLDMIQSMPNDVHPVGALVTAMSALSIFYPDANPSLMGLGVYKSKQVRDKQIVRVLGQAPTIAAAAYLRKAGKPPVQPLSNLSYSENFLYMVESMGDRSYKPNPRLARVLDILFILQAEHEMNCSTAAARHLSSSGGDVYTAVSGGVGAIYGPLHGGAVEATINMLSEIGTVENIPEFIESVKNKKRRLSGFGHRIYKNYDPRGKVVKKLADEVFSILGRDPLVEVGDALEKAALSDEYFVKRKLYPNVDFYSGLINRAMGIPSSFTAVSRIAGYLSHWRESLDDPDTKIMRPQQVYTGAGIRHYETVRERTKL", "length": 480 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY06-1", "protein_name": "Glycine/proline-rich protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MITCILKISISSFIVLRIFSFLWFSRWFCCGLCGRFWFRCWFCCWFQFWFRCRFYCRFDTGFDVRFAAGFAADLTIGFTIGFDSGFATFLDVGLDDGFATGLDISFAGGFVTGFATDFDVGFDTGFTIGFDTGFDVGLPAVFSIGFDTGFAVGFAISFTVGFDAGFPTGFFVSLDVGFVADFVIGFATGIGVGFEVDFATDFDTCFATGFAVSFDVGFAGGFSIGFAADFANGFTVGFDGGFDASFFVGLDVGFVVGFVTSFAAGLDVGFAIDFATGFDTGFAFGLAFGFDVGFAAGFAVGFATGFTVVFDVGFASDFFVGLDVGFLTGFATDFDIGFVVDFDIGFATGFVVGFDDGSIVGLVVGLPASLDDGLAIDFVVGLDIGFVTGLFVGLVDGLTTDLDVGLVDGLDDGLDDGLDVDLVVVGFVVDGLAVDLDVGLGVGLTVGFVDGLDVGFDDGLDADTVDGLDVGLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDGLDVDLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDDGLVVGLFDVFVGTGLSWEIPPPGKLPPDASPLGIGSFGVGPPGASPFIASPSGEGPLSEGLLGIRSFGISPLSIRPLGISPLGISPPNIEPSKADASDADPSNAGPLGISPLSIDPPVAGASDEGPLGKLPPDLSPPGKGSSGEGPLVESPPSEGPLGVDPLGAGSLGISPLGKSPLRIRPLGISPFGKIPSNIDPSSALASDGGPPDEPASAEGSPDVGIFGISPPIIDPPVEGASDGDPPEKLSLDISPLGKGPSGVSLLGAGPPGVGPVIASPPGEGPRDAGPLGAGSLGISPLNIRRLGISPSGISPPNIDLPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGESESDGDPAGKLPLDISPLSKGPSCVSPLGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLSISPFGISPSSIDSPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGEDASDGDPPGKFPLDISPLGKCPSGVSPLGVGPPGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLGISPFGISPPNIDLPVAGTSIGGPLDEGASDGGPPDVGPFGISPSIIDPPGEGAFDGDPPGKLPLDISPVGKGPSGVSPPGAGPPGDGPVIASPPGESPLDAGPLGAGSLGISPFGISPPNIDWPVAGTSFGGPPGEGASNGGPLVVGPFDMPVVGASDGDALEKLPLDISLPGKGPSDVGPPGAGLPGAAPPGVDLSNVGASDRGASGEGASDGCPPDVGPFDICLLSIDPPVVGASDGGPPDEGASNGGPPDTDSFGGDPLCASPLGIDPPIVDASDGDPFGAGSPDEDPSNENASGEGASGESPPCSDVSCKGPSSAGASIGCSLDNGASTPSSPDTFLSNVFPSDKSSPDAFSPDVAALVTLPSGKDPFDISPPIVALLDVSPLGKTSSDAYSSGISPGIFEKSFPLVKLQTIEYM", "length": 1504 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2S0-1", "protein_name": "Probable mannose-1-phosphate guanylyltransferase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKALILVGGFGTRLRPLTLSLPKPLVDFANKPMILHQIEALKAIGVDEVVLAINYEPEQLLVMSKFSNDVEATLGIKITCSQETEPLGTAGPLALARDKLVDGSGQPFFVLNSDVISDYPLEEMIAFHNAHGGEASIMVTKVDEPSKYGVVVMEEATGRVERFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEIFPQIAEAEKLYAMLLPGFWMDIGQPRDYITGLRLYLDSLRKKSPSKLATGPHILGNVLVDETAEIGEGCLIGPNVAIGPGCVVESGVRLSHCTVMRGVHVKRYACISSSIIGWHSTVGQWARVENMSILGKNVYVCDEIYCNGGVVLHNKEIKSDILKPDIVM", "length": 364 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9NR96-1", "protein_name": "Toll-like receptor 9", "gene_name": "TLR9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGFCRSALHPLSLLVQAIMLAMTLALGTLPAFLPCELQPHGLVNCNWLFLKSVPHFSMAAPRGNVTSLSLSSNRIHHLHDSDFAHLPSLRHLNLKWNCPPVGLSPMHFPCHMTIEPSTFLAVPTLEELNLSYNNIMTVPALPKSLISLSLSHTNILMLDSASLAGLHALRFLFMDGNCYYKNPCRQALEVAPGALLGLGNLTHLSLKYNNLTVVPRNLPSSLEYLLLSYNRIVKLAPEDLANLTALRVLDVGGNCRRCDHAPNPCMECPRHFPQLHPDTFSHLSRLEGLVLKDSSLSWLNASWFRGLGNLRVLDLSENFLYKCITKTKAFQGLTQLRKLNLSFNYQKRVSFAHLSLAPSFGSLVALKELDMHGIFFRSLDETTLRPLARLPMLQTLRLQMNFINQAQLGIFRAFPGLRYVDLSDNRISGASELTATMGEADGGEKVWLQPGDLAPAPVDTPSSEDFRPNCSTLNFTLDLSRNNLVTVQPEMFAQLSHLQCLRLSHNCISQAVNGSQFLPLTGLQVLDLSHNKLDLYHEHSFTELPRLEALDLSYNSQPFGMQGVGHNFSFVAHLRTLRHLSLAHNNIHSQVSQQLCSTSLRALDFSGNALGHMWAEGDLYLHFFQGLSGLIWLDLSQNRLHTLLPQTLRNLPKSLQVLRLRDNYLAFFKWWSLHFLPKLEVLDLAGNQLKALTNGSLPAGTRLRRLDVSCNSISFVAPGFFSKAKELRELNLSANALKTVDHSWFGPLASALQILDVSANPLHCACGAAFMDFLLEVQAAVPGLPSRVKCGSPGQLQGLSIFAQDLRLCLDEALSWDCFALSLLAVALGLGVPMLHHLCGWDLWYCFHLCLAWLPWRGRQSGRDEDALPYDAFVVFDKTQSAVADWVYNELRGQLEECRGRWALRLCLEERDWLPGKTLFENLWASVYGSRKTLFVLAHTDRVSGLLRASFLLAQQRLLEDRKDVVVLVILSPDGRRSRYVRLRQRLCRQSVLLWPHQPSGQRSFWAQLGMALTRDNHHFYNRNFCQGPTAE", "length": 1032 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9QUG3-1", "protein_name": "Prion-like protein doppel", "gene_name": "Prnd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNRLGTWWVAILCMLLASHLSTVKARGIKHRFKWNRKVLPSSGGQITEARVAENRPGAFIKQGRKLDIDFGAEGNRYYAANYWQFPDGIYYEGCSEANVTKEMLVTSCVNATQAANQAEFSREKQDSKLHQRVLWRLIKEICSAKHCDFWLERGAALRVAVDQPAMVCLLGFVWFIVK", "length": 179 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9SAC9-1", "protein_name": "AP-1 complex subunit mu-1", "gene_name": "AP1M1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAGAASALFLLDIKGRVLVWRDYRGDVTAAQAERFFTKLIETEGDSQSNDPVAYDNGVTYMFVQHSNIYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQFTEARILSEFIKTDAYRMEVTQRPPMAVTNSVSWRSEGLKFKKNEVFLDVIESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRILLEAQGRAIKGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAHIERHSRSRVEMLVKARSQFKDRSYATSVEIELPVPTDAYNPDVRTSLGSAAYAPEKDALVWKIQYFYGNKEHTLKADFHLPSIAAEEATPERKAPIRVKFEIPKFIVSGIQVRYLKIIEKSGYQAHPWVRYITMAGEYELRLM", "length": 428 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCN2-1", "protein_name": "Cytochrome P450 71B31", "gene_name": "CYP71B31", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSMFLGLLFLFPLFFILFKNLLPPRKKLPPGPTGLPLIGNLHQLGRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISNYAQTQTLVDLRKSLFSYTASIIFREAFGQNFRECDYINMDKLEELVQETETNVCSLAFTDFFPRGLGWLVDRISGQHSRMNIAFSKLTTFFEDVIDELLKTKQLDDHSDLVTAMLDVINRPRKFGSLKITYDHLIAMMSDVVLAGVNAGTVTMIWTMTELTRHPRVMKKLQEEIRATLGPNKERITEEDLEKVEYLNLVIKESFRLHPPAPLLLPRETMSDIEIQGYHIPKNAHVKINTYAIGRDPKRWTNPEEFNPERFLNTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSLPSGMTIKDIDMEEDGALNIAKKVPLQLVPTLP", "length": 498 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJ39-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 6", "gene_name": "CYP705A6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAAILSVDFQNCFIFIVLCLFSLFCYSLFFKKPKHPRGCDLPPSPPSLPIIGHLHLLFSPLTHKSLQKLSSKYGHLLHLRIFNVPVILVSSASVAYEIFRAHDVNVSSRGVAAIDESLLFGSSGIITAPYGDYWKFMKKLIATKLLRPQSLESSRGIRGEELTRFYNSLLDKARMTESVEISTEAMKLVNNTLCRMSMGRSFSEENGEAEKIRGLVGESYALTKKMFLASLLRKPLKKLRISLFEKEIMGVSDRLDELLERILVEHEEKLHEEHQGTDMMDVLLAASGDENAEYNITRNHIKSFFVEIFIGATDTSVQTTQWTMAEILNHPNVLERLRKDIDSVVGKTRLIHETDLPNLPYLQAVVKEGLRLHPPGPLLVRTFQERCKIKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLRAPPMGGSLDKFIEFS", "length": 442 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMT4-1", "protein_name": "Large ribosomal subunit protein eL13y", "gene_name": "RPL13C", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQTLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKAKLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKIRLEGINKRHAGVRAKRAAEAEKEEKK", "length": 206 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSB4-1", "protein_name": "26S proteasome regulatory subunit 7 homolog B", "gene_name": "RPT1B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIIRDIMEDPENEGPHNMRSDFEPLLSVLRLRDYETGDIIEFDSTEASEEALSDITEFGSTEASEAHFEEPYSARIKKVEKEINELAEKICNLGIKESDTGLAPPNQWDLVSDKQMMQEEQPLLVATCTQIISPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKVVKGYQKFSATPKYMAYYI", "length": 464 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVM4-1", "protein_name": "Serine hydroxymethyltransferase 5", "gene_name": "SHM5", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEPVYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYSEGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDFRPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTTSTHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALAVALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKVEKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLHRAVTITLDIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGFFISESRND", "length": 470 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SWH4-1", "protein_name": "Syntaxin-42", "gene_name": "SYP42", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATRNRTTVYRKHRDACKSARAPLSLSASDSFGGPVIEMVSGSFSRSNHSSYAPLNSYDPGPSSSDAFTIGMPPAWVDDSEEITFNIQKVRDKMNELAKAHSKALMPTFGDNKGIHREVEMLTHEITDLLRKSEKRLQMLSTRGPSEESNLRKNVQRSLATDLQNLSMELRRKQSTYLKRLQQQKEGQDEVDLEFNVNGKMSRLDEEDELGGMGFDEHQTIKLKEGQHVSAEREREIQQVLGSVNDLAQIMKDLSALVIDQGTIVDRIDYNVQNVSTSVEEGYKQLQKAERTQREGAMVKCATILLVLCLIMIVLLILKNILF", "length": 323 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYN6-1", "protein_name": "SOUL heme-binding family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEAALSIFKLSFLLTLLSGGSDLIDSLPPNCNRAECPSYEVVHAGNGYEIHRYNTTVWISTEPIQDISLNEASGNGWNQLSDYMNGNNDYHQRIEIALPYITQVSQNLSTFIVSFFVPKAFQPDPPPGNNLHVQRWDSRYVAVKQISGYVADHKIGKQVAELKASLQGTVWAKAIEKSRETGGVGSAWAYTVAQFSWPFQWSQRVNEIWFPFEMEDEETVSIVTQ", "length": 225 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZB4-1", "protein_name": "Putative DEAD-box ATP-dependent RNA helicase 43", "gene_name": "RH43", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEVDDGYVEYVPVEERLAQMKRKVVEEPGKGMMEHLSDKKKLMSVGELARGITYTEPLSTWWKPPLHVRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAELNGPMEETETIANASGVKGCAYCGGLGHRILQCPKFEHQKSVAISSSRKDHFGSDGYRGEV", "length": 542 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0E0-1", "protein_name": "Putative ATPase, plasma membrane-like", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATGDSLEDIKIEIDDDLEKIPIEEVFKKLRCSREGLSGAEGKERLKIFGPNKLENKKKEHITLRFFALMFKPLSWVIQAAAIMAMLFANGDGRQLFLGIVCLLIVNTIICYLKEDDAANVVAMARAGLSPKTKVLRDGKWSEQEASILVPGDIVSIKPGDIIPCDARLLEGDTLKVDQSALTGEFGPITKGPGEEVFSGTTCKQGEMEAVVIATGVHTFSGTTAHLVDNRTNKVGHFRKVVTEIENLCVISIAIGISIEVIVMYWIQRRNFSDVINNLLVLVIGGIPLAMPTVLYVIMVTGSLRLYRTGTITQRITAIEDMAAIDVLCSDKTGTLTLNKLSVDKNLIKVYSKDVEKEQVLLLAARASRIENRDGIDAAMVGSLADPKEARAGIREVHFNLVDKRTALTYIDGNGDWHRVSKGTPEQILDLCNARDDLRKSVHSAIRNYAERGLKSFAISWFRNTNCNTVFFFPYQLCSEHKYHIVNKLQERHICGLIGDGVDDVPSLKKADVGIAVANATEAARAASDIVLTEPGLSVIIDAVLASRAILQQMKHYTIYAVSITIRVVFGFMFIALIWKFDFSPFMVLAIALLNEETTKAITMDNVTNPSPTPDSLKLKEIFATGVVYGSYMALITVVFFWAAYRTDIFPRTFHVRDLRGNEAEMMCALYLQVSIMSQALFFVIQSRSWFFVERPGELLFLSFVTVQTIATTLAVYASWETARIEGIGWSWAGVIWLYNIIFFFPLDIMKFGIRYILTGKAQSLFDNMVHLVLNSYAKLSNGIYNHTQADHTYSLLEVSTPPSQDLRGVGWV", "length": 813 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0H7-1", "protein_name": "Histone H2A.8", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVCNTNILKDVSTKISAFENVRMIMVEGEMFQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITPRHLQLAIRGDEELDTLIKGTIIGGSVIPHIH", "length": 118 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VXF6-1", "protein_name": "Calnexin 14D", "gene_name": "Cnx14D", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MAWKMLFAILLLLSAAKTGYLAPESENSVEDVQIEPGAIYGDEKFAYKSPVIDAEKFYFADHFDDVEASRKRWVLSQAKKNDIADEIAKYDGIWNWESPQRIFWANDLGLVLKSKAKHAAIAAPFRQPFDFKSNKPLVVQYELTLQEGQDCGGSYLKLLSAGKGTEQLNRFNDKTPYTIMFGPDKCGNNLKMHFIFRHVNPLNGNITEKHCKKPNARLGVPFTDKLPHLYQLVVRPDNSFEIRLDHKIIKEGSLLTDFVPPVNPPAEIDDPNDHKPESWDERKKIPDPNAHKPEDWDEDAPPHLPDTDAVMPNGWLEDEPDMIFDPTAIEPEDWNSEIDGEWEAPLVENPVCKKAPGCGKWKAPLIPNPNYKGKWSAPMIENPNNQGKWAPRKIANPDFFEDLKPFQMTPINAVGLELWSMSSDILFDNLIITDDVELARDFAANSFDIKRLYIDRESFGNKVVELARANRAIWGIVIVAIAVPVAITIFCKFGLGPSRVAAAKKAAAAAAKKTDDPQPDDDLGAEEEEKLEKGKKEEEKKEEEEEEEKEENKEEKKEEEKDDEKEMKDCEEEEDDEEKDDEEKTDERAAGDTNKESTPLSASPKKNQKSYLDNNEDEEDTLKNKEPTPKKRKRKALKE", "length": 639 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W240-1", "protein_name": "K Homology domain-containing protein", "gene_name": "cg3927", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "METPSELTEKQNQDQPTYQPRLNEVAQKFLADLDAERKRLSAEFPLCALLIDESVDRVYSTGRIPGKEPFADVYQQKPMKIIQKVFVPVNKFPKFNFTGKILGPKGNSLRRLQEETHCKIVIKGRNSMRDRNKEEELRSSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLIPDDNDDVWHEQQRELMEMNPKSAKKSNGLNMAPYRSNFDKAIGAIRNRAPKYNNQIRRVTENPREVAYMEEVEYDYDEHLMFCSPVVRL", "length": 270 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W4G6-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG2861", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MDYEIIEFVRRHISHIDISAETRMRYPDPISNNNFDWNSIGLGEQEDAIGQDQQSQALNENANNVSPDVPPSTIAEPTLEPSTIEGNQGQNPRIISSMPDMMPMANSFNPLININQEAGVVINTGINSIDNGLPSTYSEHISQPTNTESTRNMNSSIFDIPSDLDNNSSNESGDEVTQPTAKQSKINANFVCKIESDTNMDKLPTTSNNTNDKPPNNTDSDSDIISISDLIEDLNLDFNQLPITSCDVETHPADTQSNIDANLPYDLISAINMDFVNPANRTYMSAANSTRGTAYKIRKPRTVKRIIKAPSKSNIGKLLREAAKKENAAAGTQRPKKATSTITSSVQNFPNPNNWPACPFPMQNGTMPADEPNDLMPTVSQSLTVPAAQNRPIQTIGKIIKPPVKRTYTKRANKTNNTNIPNKNSTGVIQSNGVAPTIRQGLVEPGGTNILMPWNRQIPMVSVAENPRVQTIDKIIVPPPKRTYKKRVNKTVNTNQSSESAVGDGAPSAPIQSIPKVRKPRGPGKKTAKMVPGQESQQDIPLGVPPNGEAPQTSSQAPVPRVKRAYRKRANNTNNTNILNVNSTGVMESNGGGPTIPNSQQIPNVAVVLNLPIQPIKPKAPRKPRAKKVCNQQPGTDIPFGVSAQGQTAQIKPKPKPRAPRVPKEPKAPKEPKAPKVPKAPRVPKAPRVPKAPRVPKAPRVPKPPKEPKPPKEPKPPKQPKAPRVPKEPKPPKVPKEPKAPRAPRAPRVPKAPKEPKVPKIPKNPRVPKAPRQPKASMNKIQNTVKVPLPIEPVPLETPTYINPINTPVQSTVGEILALGSMPPISPIKFPVLFDEHAAQHTVANSNMPQSSLPTLDIPQLPTRNNKQPSTKSAEDTEILGLGKNKNAMKSDGRIKQGRVSKPSLRFSPSSSSLRPVVRSLSSSSSSSSSWSSCTTCSTCSSCSTCSSSSDSSQSSRSRNRKRRSPKVPIPHKLFESNGEINFQLGQPTRLESPSPPPPVPMQACGTFEEHLTDLTLVRVHAISPLRSPTYDFDFDLPEPMLSEESSSSSSESNDESNVNCQMAPNSQNVSMHFLKVMVFYNCYVLFQQLEKKHQSLFEESSSSSSSESNDETNVNCQMTPNSQNQKKLQSAPIREPSPDQPPEAASRSSNGGTIGPCNLKAFRRDFMISNAENTGFTNPSELNLKKCATKVCTPMERNSGSQLPIQNRFILPNSNKEEGKMNVEPVMPKHKPSRIPIRTKTPIALNLMKEPEDNARKPKNILKPFFSNADVNPCSSTDYEPNFKPCESPLPAKQNDFKLINKDKKSWVSHYQEQESQELKENSFFYAKFNLPNIPKKSFKDSKANAERRCTKTFEDVRKEAQQSRYTKAINKRQNKKAMLESALGNAITEDPTVNCNLADNPNDQVEMPRNPDIVEPTVKPVKFKAFVSASIKPKSSKKRKLMNSASNSKLFKFKIFESEVNKDENEEEDVIPDNLIIPVKRKQNISELLDMQPSTSKAAATITSQPKIAQLKRMPSKLLNEKMKSYAKKRSNDDENKDTKNTGMHMHRYKIPKLSANKPQNTSTTQSPTRGFSRLPGMYQEPNFQNAQHPFSTRGYYPYQRAYPLHRPTSQYHMNQPQPLRLHHSMYVDAEPSFESVFPAPRYQPYNINPSMRHHYSYPGEPSPSTYPMGGIPFQNNNTLYPPMRNDLCYPRGRLNYPVRNLPPMNSQGTYPPNYPQNFLPNYPPSRQFLLSMQRLADINKQIASGSIESVGGFIQMAYAGRKYRTLKDLRERTMLSKDSLRKIFKCMCKIKRPKWRISKFYLYAYWCEISGIPQSSEFGKPLELNAAYRKVISSYAENKFLRMESLMEKTGFGKSKLKRVLKMIGRKRSTKWRLLNYRKPLIHLHRSQDM", "length": 1893 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W6A5-1", "protein_name": "Green-sensitive opsin-1", "gene_name": "opn1mw1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNGTEGSNFYIPMSNRTGLVRSPYDYTQYYLAEPWKFKALAFYMFLLIIFGFPINVLTLVVTAQHKKLRQPLNYILVNLAFAGTIMVIFGFTVSFYCSLVGYMALGPLGCVMEGFFATLGGQVALWSLVVLAIERYIVVCKPMGSFKFSANHAMAGIAFTWFMACSCAVPPLFGWSRYLPEGMQTSCGPDYYTLNPEYNNESYVMYMFSCHFCIPVTTIFFTYGSLVCTVKAAAAQQQESESTQKAEREVTRMVILMVLGFLFAWVPYASFAAWIFFNRGAAFSAQAMAVPAFFSKTSAVFNPIIYVLLNKQFRSCMLNTLFCGKSPLGDDESSSVSTSKTEVSSVSPA", "length": 349 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9XK79-1", "protein_name": "NADH-ubiquinone oxidoreductase chain 4L", "gene_name": "nad4L", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLIDLILIAIYVIGISGLIFNKNNIINILIISELNLGTLGMLFVLASVELNDILGELSGLYILTFTAAESAIGLAIVVILYSKTGIINIRHLNKLKG", "length": 98 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9Y2B0-1", "protein_name": "Protein canopy homolog 2", "gene_name": "CNPY2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKGWGWLALLLGALLGTAWARRSQDLHCGACRALVDELEWEIAQVDPKKTIQMGSFRINPDGSQSVVEVPYARSEAHLTELLEEICDRMKEYGEQIDPSTHRKNYVRVVGRNGESSELDLQGIRIDSDISGTLKFACESIVEEYEDELIEFFSREADNVKDKLCSKRTDLCDHALHISHDEL", "length": 182 }, "evidence": [ { "id": "A0A5G2QM02", "url": "https://omabrowser.org/oma/group/A0A5G2QM02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9Z1X0-1", 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"url": "https://www.ncbi.nlm.nih.gov/protein/XP_020924880" } ] }, { "name": "PDZ domain-containing RING finger protein 3", "type": "synonym", "evidence": [ { "id": "A0A5G2QM64", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM64/entry#names_and_taxonomy" } ] }, { "name": "RING-type E3 ubiquitin transferase PDZRN3", "type": "synonym", "evidence": [ { "id": "A0A5G2QM64", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM64/entry#names_and_taxonomy" } ] }, { "name": "Semaphorin cytoplasmic domain-associated protein 3", "type": "synonym", "evidence": [ { "id": "A0A5G2QM64", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM64/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "E3 ubiquitin-protein ligase. 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Might contribute to terminal myogenic differentiation.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM64", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM64#function" }, { "database": "UniProtKB", "id": "ARBA00053412", "url": "https://www.uniprot.org/uniprotkb/ARBA00053412#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM64", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM64" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PDZRN3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM64", "locus": { "chromosome": "13", "start_pos": 54659589, "end_pos": 54904809, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011521", "url": "https://www.ensembl.org/id/ENSSSCG00000011521" } ] } } ], "crossref": [ { "id": 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"Protein Classification" ] }, { "id": "IPR001841", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001841", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017907", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017907", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036034", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036034", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051971", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051971", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QM64", "url": "https://www.orthodb.org/?gene=A0A5G2QM64", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15545", "url": 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"categories": [ "Protein" ] }, { "id": "F1SFM6", "url": "https://www.uniprot.org/uniprotkb/F1SFM6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SFM6-1", "url": "https://www.uniprot.org/uniprotkb/F1SFM6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"length": 1066, "header": "tr|A0A5G2QM64-1|A0A5G2QM64_PIG Isoform 1 of E3 ubiquitin-protein ligase PDZRN3 OS=Sus scrofa OX=9823 GN=PDZRN3 PE=4 SV=1 CANONICAL=A0A5G2QM64-1" }, "locus": { "chromosome": "13", "start_pos": 54904610, "end_pos": 54660526, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072692.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072692.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065693.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065693.1" } ] } }, { "isoform_ac": "F1SFM6-1", "url": "https://www.uniprot.org/uniprotkb/F1SFM6/entry", "sequence": { "sequence": "MGCSLCSLQKQEEQYKLLYEVCQVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPAESQTVDTATQTDITFEHIMALTKMSPPTPPVLDPYLLPEEHPSAHEYYDPNDYIGGIHQEMDREELELEEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTASVLQQKKQEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDAPVSSPPLAGQRKLTCSQDTLGSGDLPFSNESFISADCADADYLGIPVDECERFRELLELKCQVKSASPYSLYYPSSPLDASKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLKEQYRESWMLHNSGFRNYNTSVDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEMSPDNSLRRAAEGLGCPGSEGAAGAAEAYGPSSKNLLSITEDPEVGPPDYSPSPKELDPSQTLENKERKPSDDSSSPIPGQKLGGSYLSPFPHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCKDLNSANQLEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMTTDDDAVSEMKMGRYWSKEERKQHVVKAKEQRRRREFMMQSRLDCLKEQQGADDRKEMNILELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV", "length": 783, "header": "tr|F1SFM6-1|A0A5G2QM64_PIG Computationally mapped isoform of E3 ubiquitin-protein ligase PDZRN3 OS=Sus scrofa OX=9823 GN=PDZRN3 PE=4 SV=3 CANONICAL=A0A5G2QM64-1" }, "locus": { "chromosome": "13", "start_pos": 54707283, "end_pos": 54660526, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012609.4", "url": "https://www.ensembl.org/id/ENSSSCT00000012609.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012280.4", "url": "https://www.ensembl.org/id/ENSSSCP00000012280.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 377, "start_aa": "Thr", "end_pos": 377, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr377", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SFM6", "url": "https://www.uniprot.org/uniprotkb/F1SFM6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM64", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM64" } ], "pmid": "" }, { "name": "neuromuscular junction", "id": "GO:0031594", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031594", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM64", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM64" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "neuromuscular junction development", "id": "GO:0007528", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007528", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QM64", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QM64" } ], "pmid": "" }, { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { 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genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMA4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMA4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "G protein-coupled receptor activity", "id": "GO:0004930", "url": 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"id": "A0A5G2QMA4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMA4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QMA4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 292, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QMA4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QMA4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QMA4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMA4" }, { "id": "PS50262", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50262" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "G-protein coupled receptors family 1 profile", "eco_id": "ECO_0000259", 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QMC4-1", "uniprot_ac": "A0A5G2QMC4", "uniprot_id": "A0A5G2QMC4_PIG", "mass": { "chemical_mass": 37320.0, "monoisotopic_mass": 37320.0 }, "refseq": {}, "gene_names": [ { "name": "CHORDC1", "type": "recommended", "evidence": [ { "id": "A0A5G2QMC4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMC4" } ] } ], "protein_names": [ { "name": "Cysteine and histidine-rich domain-containing protein 1", "type": "recommended", "evidence": [ { "id": "A0A5G2QMC4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMC4/entry#names_and_taxonomy" } ] }, { "name": "CHORD domain-containing protein 1", "type": "synonym", "evidence": [ { "id": "A0A5G2QMC4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMC4/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Regulates centrosome duplication, probably by inhibiting the kinase activity of ROCK2. Proposed to act as co-chaperone for HSP90. May play a role in the regulation of NOD1 via a HSP90 chaperone complex. In vitro, has intrinsic chaperone activity. This function may be achieved by inhibiting association of ROCK2 with NPM1. Plays a role in ensuring the localization of the tyrosine kinase receptor EGFR to the plasma membrane, and thus ensures the subsequent regulation of EGFR activity and EGF-induced actin cytoskeleton remodeling. Involved in stress response. Prevents tumorigenesis.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMC4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMC4#function" }, { "database": "UniProtKB", "id": "ARBA00045230", "url": "https://www.uniprot.org/uniprotkb/ARBA00045230#function" }, { "database": "UniProtKB", "id": "A0A5G2RFG4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RFG4#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMC4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMC4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CHORDC1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMC4", "locus": { "chromosome": "9", "start_pos": 23181850, "end_pos": 23208683, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000014934", "url": "https://www.ensembl.org/id/ENSSSCG00000014934" } ] } } ], "crossref": [ { "id": "ENSSSCG00000014934", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000014934", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd06488", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06488", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR007051", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007051", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007052", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007052", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008978", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008978", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039790", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039790", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "KGYTCCK", "url": "https://omabrowser.org/oma/group/KGYTCCK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR46983", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46983", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46983:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46983:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04968", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04968", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF04969", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04969", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QMC4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMC4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QMC4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMC4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RFG4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RFG4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RFG4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RFG4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MALLCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIAGCTKGRHNSEKPPEPVKPEVKTTEKKELSELKPRFQEHIIQAPKPVEAIKRPSPDEPMTNLELKISASLKQALDKLKLSSGNEENKKEEDSDEIKVGTSCKNGGCSKTYQGPQSLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTTGKHAWTKKDAGKKVVPCRHDWHQTGGEVTISVYAKNSLPELSQVVANSTLLNVHIVFEGEKEFHQNVKLWGVIDVKRSYVTMTATKIEITMRKAEPMQWASLELPAAKNQEKQKEDTAE", "length": 332, "header": "tr|A0A5G2QMC4-1|A0A5G2QMC4_PIG Isoform 1 of Cysteine and histidine-rich domain-containing protein 1 OS=Sus scrofa OX=9823 GN=CHORDC1 PE=4 SV=1 CANONICAL=A0A5G2QMC4-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QMC4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMC4/entry", "sequence": { "sequence": "MALLCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIAGCTKGRHNSEKPPEPVKPEVKTTEKKELSELKPRFQEHIIQAPKPVEAIKRPSPDEPMTNLELKISASLKQALDKLKLSSGNEENKKEEDSDEIKVGTSCKNGGCSKTYQGPQSLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTTGKHAWTKKDAGKKVVPCRHDWHQTGGEVTISVYAKNSLPELSQVVANSTLLNVHIVFEGEKEFHQNVKLWGVIDVKRSYVTMTATKIEITMRKAEPMQWASLELPAAKNQEKQKEDTAE", "length": 332, "header": "tr|A0A5G2QMC4-1|A0A5G2QMC4_PIG Isoform 1 of Cysteine and histidine-rich domain-containing protein 1 OS=Sus scrofa OX=9823 GN=CHORDC1 PE=4 SV=1 CANONICAL=A0A5G2QMC4-1" }, "locus": { "chromosome": "9", "start_pos": 23208592, "end_pos": 23187773, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069425.1", "url": "https://www.ensembl.org/id/ENSSSCT00000069425.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065187.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065187.1" } ] } }, { "isoform_ac": "A0A5G2RFG4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RFG4/entry", "sequence": { "sequence": "MALLCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGCTKGRHNSEKPPEPVKPEVKTTEKKELSELKPRFQEHIIQAPKPVEAIKRPSPDEPMTNLELKISASLKQALDKLKLSSGNEENKKEEDSDEIKVGTSCKNGGCSKTYQGPQSLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTTGKHAWTKKDAGKKVVPCRHDWHQTGGEVTISVYAKNSLPELSQVVANSTLLNVHIVFEGEKEFHQNVKLWGVIDVKRSYVTMTATKIEITMRKAEPMQWASLELPAAKNQEKQKEDTAE", "length": 313, "header": "tr|A0A5G2RFG4-1|A0A5G2QMC4_PIG Computationally mapped isoform of Cysteine and histidine-rich domain-containing protein 1 OS=Sus scrofa OX=9823 GN=CHORDC1 PE=4 SV=1 CANONICAL=A0A5G2QMC4-1" }, "locus": { "chromosome": "9", "start_pos": 23208592, "end_pos": 23187773, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076286.1", "url": "https://www.ensembl.org/id/ENSSSCT00000076286.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073542.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073542.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2RFG4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RFG4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "D4A4T9-1", "protein_name": "Cysteine and histidine-rich domain-containing protein 1", "gene_name": "Chordc1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLCYNRGCGQRFDPEANADDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGRHNSEKPPEPVKPEVKTTEKKELSELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLELKISASLKQALDKLKLSSGNEEDKKEEDSDEIKIGTSCKNGGCSKTYQGLQSLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTRGKHVWTKKDAGKKVVPCRHDWHQTGGEVTISVYAKNSLPELSQVEANSTLLNVHIVFEGEKEFHQNVKLWGVIDVKRSYVTMTATKIEITMRKAEPMQWASLELPTTKKQEKQKDIAD", "length": 331 }, "evidence": [ { "id": "A0A5G2QMC4", "url": "https://omabrowser.org/oma/group/A0A5G2QMC4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3I8H9-1", "protein_name": "Cysteine and histidine-rich domain-containing protein 1", "gene_name": "Chordc1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MALLCYNRGCGQRFDPEANADDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGRHNSEKPPEPVKPEVKTTEKKELSELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLELKISASLKQALDKLKLSSGTEEDKKEEDSDEIKIGTSCKNGGCSKTYQGLQSLDEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTKGKHVWTKKDAGKKVVPCRHDWHQTGGEVTISVYAKNSLPELSQVEANSTLLNVHIVFEGEKEFHQNVKLWGVIDVKRSYVTMTATKIEITMRKAEPMQWASLELPTAKKQEKQKEDIAD", "length": 332 }, "evidence": [ { "id": "A0A5G2QMC4", "url": "https://omabrowser.org/oma/group/A0A5G2QMC4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q29RL2-1", "protein_name": "Cysteine and histidine-rich domain-containing protein 1", "gene_name": "CHORDC1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MALLCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGRHNSEKPPEPVKPEVKTTEKKELSELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLELKISASLKQALDKLKLSSGNEENKKEEDSDEIKIGTSCKNGGCSKTYQGPQSLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTTGKHMWTKKDAGKKVVPCRHDWHQTGGEVTISVYAKNSLPELSQVVANSTLLNVHIVFEGEKEFHQNVKLWGVIDVKRSYVTMTATKIEITMRKAEPMQWASLELPAAKTEEKQKEETTE", "length": 332 }, "evidence": [ { "id": "A0A5G2QMC4", "url": "https://omabrowser.org/oma/group/A0A5G2QMC4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5ZML4-1", "protein_name": "Cysteine and histidine-rich domain-containing protein 1", "gene_name": "CHORDC1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": 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"MALLCYNRGCGQRFDPEANSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGRHNSEKPPEPVKPEVKTTEKKELSELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLELKISASLKQALDKLKLSSGSEEDKKEEDSDEIKIGTSCKNGGCSKTYQGLQSLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTRGKHVWTKKDAGKKVVPCRHDWHQTGGEVTISVYAKNSLPELSQVEANSTLLNVHIVFEGEKEFHQNVKLWGVIDVKRSYVTMTATKIEITMRKAEPMQWASLELPTTKKQEKQKDIAD", "length": 331 }, "evidence": [ { "id": "A0A5G2QMC4", "url": "https://omabrowser.org/oma/group/A0A5G2QMC4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9UHD1-1", "protein_name": "Cysteine and histidine-rich domain-containing protein 1", "gene_name": "CHORDC1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MALLCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGRHNSEKPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLELKISASLKQALDKLKLSSGNEENKKEEDNDEIKIGTSCKNGGCSKTYQGLESLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTKGKHMWTKKDAGKKVVPCRHDWHQTGGEVTISVYAKNSLPELSRVEANSTLLNVHIVFEGEKEFDQNVKLWGVIDVKRSYVTMTATKIEITMRKAEPMQWASLELPAAKKQEKQKDATTD", "length": 332 }, "evidence": [ { "id": "A0A5G2QMC4", "url": "https://omabrowser.org/oma/group/A0A5G2QMC4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "regulation of centrosome duplication", "id": "GO:0010824", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010824", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMC4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMC4" } ], "pmid": "" }, { "name": "regulation of cellular response to heat", "id": "GO:1900034", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900034", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMC4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMC4" } ], "pmid": "" }, { "name": "protein folding", "id": "GO:0006457", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006457", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMC4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMC4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMC4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMC4" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMC4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMC4" } ], "pmid": "" }, { "name": "ADP binding", "id": "GO:0043531", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043531", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMC4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMC4" } ], "pmid": "" }, { "name": "Hsp90 protein binding", "id": "GO:0051879", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051879", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMC4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMC4" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMC4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMC4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 260, "end_pos": 262, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QMG7-1", "uniprot_ac": "A0A5G2QMG7", "uniprot_id": "A0A5G2QMG7_PIG", "mass": { "chemical_mass": 35253.0, "monoisotopic_mass": 35253.0 }, "refseq": {}, "gene_names": [ { "name": "LOC396787", "type": "recommended", "evidence": [ { "id": "A0A5G2QMG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMG7" } ] } ], "protein_names": [ { "name": "Olfactory receptor", "type": "recommended", "evidence": [ { "id": "A0A5G2QMG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMG7/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Putative odorant or sperm cell receptor.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMG7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMG7#function" }, { "database": "UniProtKB", "id": "ARBA00003929", "url": "https://www.uniprot.org/uniprotkb/ARBA00003929#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMG7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMG7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LOC396787", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMG7", "locus": {} } ], "crossref": [ { "id": "A0A5G2QMG7", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QMG7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000044533", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000044533", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR000276", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000276", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000725", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000725", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "HSISYKG", "url": "https://omabrowser.org/oma/group/HSISYKG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR48001", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48001", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13853", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13853", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QMG7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMG7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QMG7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMG7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRRENQSSVSEFLLLGLPIQPQQQGMFFALFLGMYLITVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDVSLSSVTVPKMLMNMQTQQQSIPYAGCISQMYFFILFGCLDNFLLTVMAYDRYVAICQPLRYSTIMRQELCVSLVAGSWFLCCIYALLHTLLLVQLSFCMDNTISHFFCDLTVLLKLSCSDTSLNDLVIFAVGGTLFILSLCSILGSYIHIGTTVLSVSPTKKLFKICSTCGSHLFVVSLYYGTLATVYFFSSSWDSNDKDIIASAMYTVVTPMLNPFIYSLRNRDIKQALEILVNRANFLK", "length": 312, "header": "tr|A0A5G2QMG7-1|A0A5G2QMG7_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN=LOC396787 PE=3 SV=1 CANONICAL=A0A5G2QMG7-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QMG7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMG7/entry", "sequence": { "sequence": "MRRENQSSVSEFLLLGLPIQPQQQGMFFALFLGMYLITVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDVSLSSVTVPKMLMNMQTQQQSIPYAGCISQMYFFILFGCLDNFLLTVMAYDRYVAICQPLRYSTIMRQELCVSLVAGSWFLCCIYALLHTLLLVQLSFCMDNTISHFFCDLTVLLKLSCSDTSLNDLVIFAVGGTLFILSLCSILGSYIHIGTTVLSVSPTKKLFKICSTCGSHLFVVSLYYGTLATVYFFSSSWDSNDKDIIASAMYTVVTPMLNPFIYSLRNRDIKQALEILVNRANFLK", "length": 312, "header": "tr|A0A5G2QMG7-1|A0A5G2QMG7_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN=LOC396787 PE=3 SV=1 CANONICAL=A0A5G2QMG7-1" }, "locus": { "chromosome": "1", "start_pos": 263682085, "end_pos": 263681150, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077677.1", "url": "https://www.ensembl.org/id/ENSSSCT00000077677.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065824.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065824.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMG7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMG7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "Q7TRY6-1", "protein_name": "Olfactory receptor", "gene_name": "Or1j8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "VRRENQSTVFEFLLLGLPIRPEHQNVFFTMFLAMYLTTVLGNLLIILLIRLDPHLHTPMYFFLSHLAFSDISLSSITVPKMLMNIQAQHHSISYKGCISQMYFFILFVCLDNFLLAAMAYDRYVAICHPLHYITVMREELCVCLVAGSWFFSCVHALLHTLLLIQLSFCASNTVPNFFCDLTALLKLSCSDISLNKLVIFTEGGLLFILPLSSIMGSYILIGRTALKAPSTKRFIKTFSTCGSHLLVVSLYYGTLAGEYFFSSFQNSSDKDIVASVIYTVVTPLLNPFIYSLRNSDIKQALEIVVTKINCFK", "length": 312 }, "evidence": [ { "id": "A0A5G2QMG7", "url": "https://omabrowser.org/oma/group/A0A5G2QMG7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "G protein-coupled receptor activity", "id": "GO:0004930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004930", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMG7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMG7" } ], "pmid": "" }, { "name": "olfactory receptor activity", "id": "GO:0004984", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004984", "evidence": [ { 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"UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAPWASLVTAPGSNASSGPPASFYLTGIPGSENVQPFLSLPFCVLYLTGTVGNCTILHIIHTDQRLHEPMYYFLAMLALTDLGMSISTLPTVLKTFWFDAKEIEINACVAQMYFIHTFSLMESAVLLAMALDRYVAICDPLRYCSKLTPRRIVYIGGFIVIRCSPVLPVVLVRIPRLSFCHSHVLSHSFCLHQDIIRLACADISFNVLFGLFVVVFYWGVDALGIFLSYAFIFRSVLRIASKRGKLKALNTCASHICAVLILYVPMIGLSLVHRFAKHSSPVIHVTMANVYLLVPPVLNPIIYSIKTKQIRQGFLRILFSKRVGLAPT", "length": 328, "header": "tr|A0A5G2QMS7-1|A0A5G2QMS7_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A5G2QMS7-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QMS7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMS7/entry", "sequence": { "sequence": 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"length": 1342, "header": "tr|A0A5G2QMU0-1|A0A5G2QMU0_PIG Isoform 1 of WD repeat-containing protein 11 OS=Sus scrofa OX=9823 GN=WDR11 PE=1 SV=2 CANONICAL=A0A5G2QMU0-1" }, "locus": { "chromosome": "14", "start_pos": 130673770, "end_pos": 130511690, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091347.2", "url": "https://www.ensembl.org/id/ENSSSCT00000091347.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065979.2", "url": "https://www.ensembl.org/id/ENSSSCP00000065979.2" } ] } }, { "isoform_ac": "A0A8W4FG97-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FG97/entry", "sequence": { "sequence": 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"length": 1334, "header": "tr|A0A8W4FG97-1|A0A5G2QMU0_PIG Computationally mapped isoform of WD repeat-containing protein 11 OS=Sus scrofa OX=9823 GN=WDR11 PE=1 SV=1 CANONICAL=A0A5G2QMU0-1" }, "locus": { "chromosome": "14", "start_pos": 130673770, "end_pos": 130511690, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102089.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102089.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078265.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078265.1" } ] } }, { "isoform_ac": "F1S3Z9-1", "url": "https://www.uniprot.org/uniprotkb/F1S3Z9/entry", "sequence": { "sequence": "MEKLRLSVAGSACAVGHRDLRSPQSEENRRHRRQHHFPQGRSLSQAEPGNQPGGGTLEEAERRSGGTGRRRNPWAVEPRNRRNQLAAPTEPPGVYLERKGSGRCFLVAGRRRGPGFAVAMLPYTVNFKVSARTLTGALNAHNKAAVDWGWQGLIAYGCHSLVVVIDSNTAQTLQVLEKHKADVVKVKWARENYHHNIGSPYSLRLASADVNGKIIVWDVAAGIAQCEIQEHAKPIQDVQWLWNQDASRDLLLAIHPPNYIVLWNADTGTKLWKKSYADNILSFSFDPFDPSHLTLLTSEGIVFISDFSPSKPPSGPGKKVYISSPHSSPAHSKVAAATGAKKALNKVKILITQEKPRNHMLLLYPREILILDLEVNQTVGVIAIERTGVPFLQVIPCFQRDCLFCLHENGCITLRVRRSYNSIFTTSSEEPDPDPVQELTYDLRSQCDAIRVTKTVRPFSMVCCPVNENAAALIVSDGRVMIWELKSAVCSRNSRNSSSGVSPLYSPVSFCGIPVGVLQNKLPDLSLDNMIGQSAVAGEEHPKSPILQEVHLKFLLTGLLSGLPSPHFAIRMCPPLTTKNIKVYQPLLAVGTSNGSVLVYHLTSGLLHKELSIHSCEVKGIEWTSLTGFLSFATSTPNNMGLVRNELQLVDLPTGRSIAFRGERGNDESPIEMIKVSHLKQYLAVVFKDKPLELWDVRTCTILREMSKNFPAITALEWSPSHNLKSLRKKQLATREAMARQTVVSDTELSVVESSVISLLQEAESKSELSQNISAREHFVFTDNDGQVYHLTVEGNSVKDSARIPPDGSMGSITCIAWKGDTLVLGDMDGNLNFWDLKGRVSRGIPTHRSWVRKIRFAPGKGNQKLIAMYNDGAEVWDTKEVQMVSSLRSGRNVTFRILDVDWCTSDKVILASDDGCIRVLEMSMKSTCFRMDEQELTEPVWCPYLLVPRASLALKAFLLHQPWNGRYSLDVSHIDYPENEEIKNLLQEQLNSLSNDIKKLLLDPEFTLLQRCLLVSRLYGDESELHFWTVAAHYLHSLSQERAASTTAARAPAPRDRVNNPLDICYDILCENAYFQKFQLERVNLQEVKRSTYDHTRKCTDQLLLLGQTDRAVQLLLETSAENQHYYCDSLKACLVTTVTSSGPSQSTIKLVATNMIANGKLAEGVQLLCLIDKAADACRYLQTYGEWNRAAWLAKVRLNSEECADVLKRWVDHLCSPQVNQKSKALLVLLSLGCFSSVAETLHSMRYFDRAALFVEACLKYGAIEKLIAAIYADYARSLKNLGFKQGAVLFASKAGAAGRDLLNELESPKQELTAQ", "length": 1318, "header": "tr|F1S3Z9-1|A0A5G2QMU0_PIG Computationally mapped isoform of WD repeat-containing protein 11 OS=Sus scrofa OX=9823 GN=WDR11 PE=1 SV=4 CANONICAL=A0A5G2QMU0-1" }, "locus": { "chromosome": "14", "start_pos": 130673770, "end_pos": 130511690, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011693.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011693.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011391.4", "url": "https://www.ensembl.org/id/ENSSSCP00000011391.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FG97", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FG97" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-9013407", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013407", "resource": "Reactome", "description": "RHOH GTPase cycle" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 8, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMU0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMU0" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMU0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMU0" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMU0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMU0" } ], "pmid": "" }, { "name": "cytoplasmic vesicle", "id": "GO:0031410", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031410", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMU0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMU0" } ], "pmid": "" }, { "name": "axoneme", "id": "GO:0005930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005930", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMU0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMU0" } ], "pmid": "" }, { "name": "trans-Golgi network", "id": "GO:0005802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005802", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMU0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMU0" } ], "pmid": "" }, { "name": "ciliary basal body", "id": "GO:0036064", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036064", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMU0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMU0" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMU0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMU0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "intracellular protein transport", "id": "GO:0006886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006886", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMU0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMU0" } ], "pmid": "" }, { "name": "cilium assembly", "id": "GO:0060271", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060271", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMU0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMU0" } ], "pmid": "" }, { "name": "animal organ development", "id": "GO:0048513", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048513", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMU0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMU0" } ], "pmid": "" }, { "name": "vesicle tethering to Golgi", "id": "GO:0099041", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099041", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMU0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMU0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 394, "end_pos": 396, "annotation": "n_glycosylation_sequon" }, { "start_pos": 514, "end_pos": 516, "annotation": "n_glycosylation_sequon" }, { "start_pos": 612, "end_pos": 614, "annotation": "n_glycosylation_sequon" }, { "start_pos": 790, "end_pos": 792, "annotation": "n_glycosylation_sequon" }, { "start_pos": 911, "end_pos": 913, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QMU0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1342, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QMU0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QMU0" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QMU0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMU0" }, { "id": "PF23753", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23753" } ], "ann_type": 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Classification" ] }, { "id": "A0A5G2QMX1", "url": "https://www.orthodb.org/?gene=A0A5G2QMX1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QY42", "url": "https://www.orthodb.org/?gene=A0A5G2QY42", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10658", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10658", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10658:SF27", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10658:SF27", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02121", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02121", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-1483196", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1483196", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_001927816", "url": 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[ "Protein" ] }, { "id": "A0A5G2QY42", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QY42", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QY42-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QY42-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1XJU9", "url": "https://www.uniprot.org/uniprotkb/A0A8D1XJU9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1XJU9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1XJU9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGJ4", "url": "https://www.uniprot.org/uniprotkb/I3LGJ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGJ4-1", "url": "https://www.uniprot.org/uniprotkb/I3LGJ4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVLIKEFRVVLPCSVQEYQVGQLYSVAEASKNETGGGEGIEVLKNEPYEKDGEKGQYTHKIYHLKSKVPAFVRMIAPEGSLVFHEKAWNAYPYCRTIVTNEYMKDDFFIKIETWHKPDLGTLENVHGLDPNTWKTVEIVHIDIADRSQVEPADYKADEDPALFQSVKTKRGPLGPNWKKELANNPDCPQMCAYKLVTIKFKWWGLQSKVENFIQKQEKRIFTNFHRQLFCWIDKWIDLTMEDIRRMEDETQKELETMRKKGSVRGTSAADV", "length": 271, "header": "tr|A0A5G2QMX1-1|A0A5G2QMX1_PIG Isoform 1 of Phosphatidylinositol transfer protein beta isoform OS=Sus scrofa OX=9823 GN=PITPNB PE=1 SV=1 CANONICAL=A0A5G2QMX1-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QMX1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMX1/entry", "sequence": { "sequence": "MVLIKEFRVVLPCSVQEYQVGQLYSVAEASKNETGGGEGIEVLKNEPYEKDGEKGQYTHKIYHLKSKVPAFVRMIAPEGSLVFHEKAWNAYPYCRTIVTNEYMKDDFFIKIETWHKPDLGTLENVHGLDPNTWKTVEIVHIDIADRSQVEPADYKADEDPALFQSVKTKRGPLGPNWKKELANNPDCPQMCAYKLVTIKFKWWGLQSKVENFIQKQEKRIFTNFHRQLFCWIDKWIDLTMEDIRRMEDETQKELETMRKKGSVRGTSAADV", "length": 271, "header": "tr|A0A5G2QMX1-1|A0A5G2QMX1_PIG Isoform 1 of Phosphatidylinositol transfer protein beta isoform OS=Sus scrofa OX=9823 GN=PITPNB PE=1 SV=1 CANONICAL=A0A5G2QMX1-1" }, "locus": { "chromosome": "14", "start_pos": 45250003, "end_pos": 45188928, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084613.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084613.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066232.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066232.1" } ] } }, { "isoform_ac": "A0A5G2QWS9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWS9/entry", "sequence": { "sequence": "AVLSLEFLLYSLLFQYQVGQLYSVAEASKNETGGGEGIEVLKNEPYEKDGEKGQYTHKIYHLKSKVPAFVRMIAPEGSLVFHEKAWNAYPYCRTSKSNEYMKDDFFIKIETWHKPDLGTLENVHGLDPNTWKTVEIVHIDIADRSQVEPADYKADEDPALFQSVKTKRGPLGPNWKKELANNPDCPQMCAYKLVTIKFKWWGLQSKVENFIQKQEKRIFTNFHRQLFCWIDKWIDLTMEDIRRMEDETQKELETMRKKGSVRGTSAADV", "length": 269, "header": "tr|A0A5G2QWS9-1|A0A5G2QMX1_PIG Computationally mapped isoform of Phosphatidylinositol transfer protein beta isoform OS=Sus scrofa OX=9823 GN=PITPNB PE=1 SV=1 CANONICAL=A0A5G2QMX1-1" }, "locus": { "chromosome": "14", "start_pos": 45242360, "end_pos": 45188928, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000085883.2", "url": "https://www.ensembl.org/id/ENSSSCT00000085883.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062639.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062639.1" } ] } }, { "isoform_ac": "A0A5G2QY42-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QY42/entry", "sequence": { "sequence": "MVLIKEFRVVLPCSVQEYQVGQLYSVAEASKNETGGGEGIEVLKNEPYEKDGEKGQYTHKIYHLKSKVPAFVRMIAPEGSLVFHEKAWNAYPYCRTIVTNEYMKDDFFIKIETWHKPDLGTLENVHGLDPNTWKTVEIVHIDIADRSQVEPADYKADEDPALFQSVKTKRGPLGPNWKKELANNPDCPQMCAYKLVTIKFKWWGLQSKVENFIQKQEKRIFTNFHRQLFCWIDKWIDLTMEDIRRMEDETQKELETLRNQGQVRGTSAASDE", "length": 272, "header": "tr|A0A5G2QY42-1|A0A5G2QMX1_PIG Computationally mapped isoform of Phosphatidylinositol transfer protein beta isoform OS=Sus scrofa OX=9823 GN=PITPNB PE=1 SV=1 CANONICAL=A0A5G2QMX1-1" }, "locus": { "chromosome": "14", "start_pos": 45250003, "end_pos": 45187624, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000086105.1", "url": "https://www.ensembl.org/id/ENSSSCT00000086105.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066866.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066866.1" } ] } }, { "isoform_ac": "A0A8D1XJU9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1XJU9/entry", "sequence": { "sequence": "AVLSLEFLLYSLLFQYQVGQLYSVAEASKNETGGGEGIEVLKNEPYEKDGEKGQYTHKIYHLKSKVPAFVRMIAPEGSLVFHEKAWNAYPYCRTSKSNEYMKDDFFIKIETWHKPDLGTLENVHGLDPNTWKTVEIVHIDIADRSQVEPADYKADEDPALFQSVKTKRGPLGPNWKKELANNPDCPQMCAYKLVTIKFKWWGLQSKVENFIQKQEKRIFTNFHRQLFCWIDKWIDLTMEDIRRMEDETQKELETECPGEARGFHAVI", "length": 267, "header": "tr|A0A8D1XJU9-1|A0A5G2QMX1_PIG Computationally mapped isoform of Phosphatidylinositol transfer protein beta isoform OS=Sus scrofa OX=9823 GN=PITPNB PE=1 SV=1 CANONICAL=A0A5G2QMX1-1" }, "locus": { "chromosome": "14", "start_pos": 45242360, "end_pos": 45191567, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000010923.4", "url": "https://www.ensembl.org/id/ENSSSCT00000010923.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000010638.4", "url": "https://www.ensembl.org/id/ENSSSCP00000010638.4" } ] } }, { "isoform_ac": "I3LGJ4-1", "url": "https://www.uniprot.org/uniprotkb/I3LGJ4/entry", "sequence": { "sequence": "MEKRLQKSTTIWAIMYQVGQLYSVAEASKNETGGGEGIEVLKNEPYEKDGEKGQYTHKIYHLKSKVPAFVRMIAPEGSLVFHEKAWNAYPYCRTSKSNEYMKDDFFIKIETWHKPDLGTLENVHGLDPNTWKTVEIVHIDIADRSQVEPADYKADEDPALFQSVKTKRGPLGPNWKKELANNPDCPQMCAYKLVTIKFKWWGLQSKVENFIQKQEKRIFTNFHRQLFCWIDKWIDLTMEDIRRMEDETQKELETVRLPVLSVGRNSGDPWVGGLCTTFQS", "length": 280, "header": "tr|I3LGJ4-1|A0A5G2QMX1_PIG Computationally mapped isoform of Phosphatidylinositol transfer protein beta isoform OS=Sus scrofa OX=9823 GN=PITPNB PE=1 SV=4 CANONICAL=A0A5G2QMX1-1" }, "locus": { "chromosome": "14", "start_pos": 45242521, "end_pos": 45191748, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024426.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024426.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023188.4", "url": "https://www.ensembl.org/id/ENSSSCP00000023188.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D1XJU9", "url": "https://www.uniprot.org/uniprotkb/A0A8D1XJU9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100157274", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157274", "resource": "KEGG Pathway" }, { "id": "R-SSC-1483196", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1483196", "resource": "Reactome", "description": "PI and PC transport between ER and Golgi membranes" } ], "orthologs": [ { "uniprot_canonical_ac": "P48739-1", "protein_name": "Phosphatidylinositol transfer protein beta isoform", "gene_name": "PITPNB", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVLIKEFRVVLPCSVQEYQVGQLYSVAEASKNETGGGEGIEVLKNEPYEKDGEKGQYTHKIYHLKSKVPAFVRMIAPEGSLVFHEKAWNAYPYCRTIVTNEYMKDDFFIKIETWHKPDLGTLENVHGLDPNTWKTVEIVHIDIADRSQVEPADYKADEDPALFQSVKTKRGPLGPNWKKELANSPDCPQMCAYKLVTIKFKWWGLQSKVENFIQKQEKRIFTNFHRQLFCWIDKWIDLTMEDIRRMEDETQKELETMRKRGSVRGTSAADV", "length": 271 }, "evidence": [ { "id": "A0A5G2QMX1", "url": "https://omabrowser.org/oma/group/A0A5G2QMX1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P53811-1", "protein_name": "Phosphatidylinositol transfer protein beta isoform", "gene_name": "Pitpnb", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLIKEFRVVLPCSVQEYQVGQLYSVAEASKNETGGGEGIEVLKNEPYENDGEKGQYTHKIYHLKSKVPAFVRMIAPEGSLVFHEKAWNAYPYCRTIVTNEYMKDDFFIKIETWHKPDLGTLENVHGLDPNTWKTVEIVHIDIADRSQVEPADYKADEDPALFHSVKTKRGPLGPNWKKELANTPDCPRMCAYKLVTIKFKWWGLQSKVENFIQKQEKRIFTNLHRQLFCWIDKWIDLTMEDIRRMEDETQKELETMRKKGSVRGTSAADA", "length": 271 }, "evidence": [ { "id": "A0A5G2QMX1", "url": "https://omabrowser.org/oma/group/A0A5G2QMX1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P53812-1", "protein_name": "Phosphatidylinositol transfer protein beta isoform", "gene_name": "Pitpnb", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVLIKEFRVVLPCSVQEYQVGQLYSVAEASKNETGGGEGIEVLKNEPYENDGEKGQYTHKIYHLKSKVPAFVRMIAPEGSLVFHEKAWNAYPYCRTIVTNEYMKDDFFIKIETWHKPDLGTLENVHGLDPNTWKTVEIVHIDIADRSQVEPADYKADEDPALFQSVKTKRGPLGPNWKKELANTPDCPKMCAYKLVTIKFKWWGLQSKVENFIQKQEKRIFTNLHRQLFCWIDKWIDLTMEDIRRMEDETQKELETMRKKGSVRGTSAADA", "length": 271 }, "evidence": [ { "id": "A0A5G2QMX1", "url": "https://omabrowser.org/oma/group/A0A5G2QMX1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9NCL8-1", "protein_name": "Phosphatidylinositol transfer protein 1", "gene_name": "pitA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLIREFRVVLPLTVEEYRVGQLYSVAKTSSQETSNGEGVEVLVNEPYKEPEHEGQYTHKIYHLGSRLPGWIRALIPSSALKLEEKAWNAYPYCKTVLKSPFLGEKFTFIIESRHAQDNCKTENIHNLSEKELKERTVEVIDITKPIKDPKNYKETEDPTKIRSEKANRGPLEEEKWRESTEMPIMTCYKLVTVEFKYFGFQTKVENFMMGIEFDLFTKFHRQVYCWLDEWFGMSMDDVRAFELKTKEDLKKKLEEKDENKAAEK", "length": 264 }, "evidence": [ { "id": "A0A5G2QMX1", "url": "https://omabrowser.org/oma/group/A0A5G2QMX1/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9TR36-1", "protein_name": "Phosphatidylinositol transfer protein beta isoform", "gene_name": "PITPNB", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVLIKEFRVVLPCSVQEYQVGQLYSVAEASKNETGGGEGIEVLKNEPYEKDGEKGQYTHKIYHLKSKVPAFVRMIAPEGSLVFHEKAWNAYPYCRTIVTNEYMKDDFFIKIETWHKPDLGTLENVHGLDPNTWKTVEIVHIDIADRSQVEPADYKADEDPALFQSVKTKRGPLGPNWKKELANNPDCPQMCAYKLVTIKFKWWGLQSKVENFIQKQEKRIFTNFHRQLFCWIDKWIDLTMEDIRRMEDETQKELETMRKKGSVRGTSAADV", "length": 271 }, "evidence": [ { "id": "A0A5G2QMX1", "url": "https://omabrowser.org/oma/group/A0A5G2QMX1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMX1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMX1" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMX1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMX1" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMX1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMX1" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 7, "go_terms": [ { "name": "phosphatidylcholine binding", "id": "GO:0031210", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031210", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMX1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMX1" } ], "pmid": "" }, { "name": "phosphatidylinositol binding", "id": "GO:0035091", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035091", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMX1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMX1" } ], "pmid": "" }, { "name": "phosphatidylinositol transfer activity", "id": "GO:0008526", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008526", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMX1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMX1" } ], "pmid": "" }, { "name": "phosphatidylcholine transporter activity", "id": "GO:0008525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008525", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMX1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMX1" } ], "pmid": "" }, { "name": "phospholipid transporter activity", "id": "GO:0005548", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005548", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMX1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMX1" } ], "pmid": "" }, { "name": "lipid binding", "id": "GO:0008289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008289", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMX1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMX1" } ], "pmid": "" }, { "name": "phosphatidylcholine transfer activity", "id": "GO:0120019", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0120019", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMX1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMX1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "membrane organization", "id": "GO:0061024", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061024", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMX1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMX1" } ], "pmid": "" }, { "name": "retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum", "id": "GO:0006890", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006890", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMX1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMX1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 32, "end_pos": 34, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "38571", "name": "", "equation": "a 1,2-diacyl-sn-glycero-3-phosphocholine(in) = a 1,2-diacyl-sn-glycero-3-phosphocholine(out)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "38571", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/38571" } ] }, { "id": "38691", "name": "", "equation": "a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol)(in) = a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol)(out)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "38691", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/38691" } ] }, { "id": "43776", "name": "", "equation": "an N-(acyl)-sphingosylphosphocholine(in) = an N-(acyl)-sphingosylphosphocholine(out)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "43776", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/43776" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QMX1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 271, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QMX1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QMX1" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QMX1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMX1" }, { "id": "PF02121", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02121" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Phosphatidylinositol transfer protein N-terminal", "eco_id": "ECO_0000259", "start_pos": 2, "end_pos": 252, "start_aa": "Val", "end_aa": "Lys", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 32, "end_pos": 34 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QN86-1", "uniprot_ac": "A0A5G2QN86", "uniprot_id": "A0A5G2QN86_PIG", "mass": { "chemical_mass": 93142.0, "monoisotopic_mass": 93142.0 }, "refseq": {}, "gene_names": [ { "name": "TMTC2", "type": "recommended", "evidence": [ { "id": "A0A5G2QN86", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QN86" } ] } ], "protein_names": [ { "name": "dolichyl-phosphate-mannose--protein mannosyltransferase", "type": "recommended", "evidence": [ { "id": "A0A5G2QN86", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QN86/entry#names_and_taxonomy" } ] }, { "name": "2.4.1.109", "type": "synonym", "evidence": [ { "id": "A0A5G2QN86", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QN86/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QN86", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QN86" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TMTC2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QN86", "locus": { "chromosome": "5", "start_pos": 98697035, "end_pos": 99229550, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024065", "url": "https://www.ensembl.org/id/ENSSSCG00000024065" } ] } } ], "crossref": [ { "id": "A0A5G2QN86", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QN86", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000024065", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024065", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR011990", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011990", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013618", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013618", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019734", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019734", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052384", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052384", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR44216", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44216", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44216:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44216:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF08409", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08409", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13181", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13181", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13424", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13424", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13432", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13432", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QN86", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QN86", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QN86-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QN86-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LN91", "url": "https://www.uniprot.org/uniprotkb/I3LN91", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LN91-1", "url": "https://www.uniprot.org/uniprotkb/I3LN91-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGLCSDLKLTYKGRVHQALSADFCYDDSRAIKTNQDLLPETPWTHIFYNDFWGTLLTHSGSHKSYRPLCTLSFRLNHAIGGLNPWSYHLVNVLLHAAVTGLFTSFSKALLGDGCWTFLAGLMFASHPIHTEAVAGIVGRADVGASLFFLLSLLCYMKHCSTRGSSARTWGWFLGTGLCAGCSMLWKEQGLTVLAVSAVYDVFVFHRLKVRDVFPTIYKRKNLSLFLSISLLTFWGTSLLGARLYWMGNKPPSFSNSDNPAADSDSLLARTLTFLYLPTKNLWLLLCPDTLSFDWSMDAVPLLKTVCDWRNLHTVAFYALLLLAYYGLKSPRGDRECNGKFAANGKQNANGHSCLSDAEYRNSEIKPSFASKVENGIKNTASQRTQLPSTENIVVLSLSLLIIPFVPATNLFFYVGFVIAERVLYIPSMGFCLLITVGARALYVKVQKRFLKSLIFYATATLIVFYGLKTAIRNGDWQNEEMLYRSGIKVNPAKAWGNLGNVLKSQSKISEAESAYRNALYYRSNMADMLYNLGLLLQENSRFAEALHYYKLAIGSRPTLASAYLNTGIILMNQGKTEEARRTFLKCSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGHYEDALSVYKEAIQKMPRQFAREAYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKSEAEKFFLKAIELDPTKGNCYMHYGQFLLEEARLIEAAEMAKKAAELDSTEFDVVFNAAHMLRQASLNEAAEKYYDLAARLRPNYPAALMNLGAILHLNGRLQRAEANYLRALQLKPDDVITQSNLRKLWNIMEKQGLKTSKT", "length": 827, "header": "tr|A0A5G2QN86-1|A0A5G2QN86_PIG Isoform 1 of dolichyl-phosphate-mannose--protein mannosyltransferase OS=Sus scrofa OX=9823 GN=TMTC2 PE=3 SV=1 CANONICAL=A0A5G2QN86-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QN86-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QN86/entry", "sequence": { "sequence": "MGLCSDLKLTYKGRVHQALSADFCYDDSRAIKTNQDLLPETPWTHIFYNDFWGTLLTHSGSHKSYRPLCTLSFRLNHAIGGLNPWSYHLVNVLLHAAVTGLFTSFSKALLGDGCWTFLAGLMFASHPIHTEAVAGIVGRADVGASLFFLLSLLCYMKHCSTRGSSARTWGWFLGTGLCAGCSMLWKEQGLTVLAVSAVYDVFVFHRLKVRDVFPTIYKRKNLSLFLSISLLTFWGTSLLGARLYWMGNKPPSFSNSDNPAADSDSLLARTLTFLYLPTKNLWLLLCPDTLSFDWSMDAVPLLKTVCDWRNLHTVAFYALLLLAYYGLKSPRGDRECNGKFAANGKQNANGHSCLSDAEYRNSEIKPSFASKVENGIKNTASQRTQLPSTENIVVLSLSLLIIPFVPATNLFFYVGFVIAERVLYIPSMGFCLLITVGARALYVKVQKRFLKSLIFYATATLIVFYGLKTAIRNGDWQNEEMLYRSGIKVNPAKAWGNLGNVLKSQSKISEAESAYRNALYYRSNMADMLYNLGLLLQENSRFAEALHYYKLAIGSRPTLASAYLNTGIILMNQGKTEEARRTFLKCSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGHYEDALSVYKEAIQKMPRQFAREAYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKSEAEKFFLKAIELDPTKGNCYMHYGQFLLEEARLIEAAEMAKKAAELDSTEFDVVFNAAHMLRQASLNEAAEKYYDLAARLRPNYPAALMNLGAILHLNGRLQRAEANYLRALQLKPDDVITQSNLRKLWNIMEKQGLKTSKT", "length": 827, "header": "tr|A0A5G2QN86-1|A0A5G2QN86_PIG Isoform 1 of dolichyl-phosphate-mannose--protein mannosyltransferase OS=Sus scrofa OX=9823 GN=TMTC2 PE=3 SV=1 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"length": 1429, "header": "tr|A0A5G2QNQ2-1|A0A5G2QNQ2_PIG Isoform 1 of Vinculin OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A5G2QNQ2-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QNQ2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNQ2/entry", "sequence": { "sequence": 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"length": 1429, "header": "tr|A0A5G2QNQ2-1|A0A5G2QNQ2_PIG Isoform 1 of Vinculin OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A5G2QNQ2-1" }, "locus": { "chromosome": "3", "start_pos": 44060804, "end_pos": 44028408, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087912.2", "url": "https://www.ensembl.org/id/ENSSSCT00000087912.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065685.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065685.1" } ] } }, { "isoform_ac": "A0A8W4FCU4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCU4/entry", "sequence": { "sequence": "MESFLLDDIGSMIQNKAIERIISSMTVQLCHLIISMEREDVENEVFASLEKMAEELAQASEEFVQVARRLAGDCEEERFQEEMGAAAESLILSSRNITLVAQKLHLRPECQSHQEELVTTAQQILVDTTKVLLLEDAAMARKMVRAAGWCLTCLDALEAAGDAASLRGPFADLAAALQTLGGLTARGAGERLRPARLLLRGCVPALLEAARGHLRRPHDPQLVTARRHVFAVARKALGELLGRLEPGASAPATSAQHGVFPRLLQQLHQLLAAPGPERLCSGMDAPLAAVVWHCMRLASCSAPPERLRLVAGCRRLLELRNVSARRLGPIDRPPETGGGIQEPGKKCAELRAATEDLSQGVRMELLRRILDTFTDTRSPLQRLVQAALATSPVSCPCEGEALPKSLQLLLAAFQDQAKQMLRVAHLVLVCCPQQQTCKDMEVTMAGLWGLVVRVQQLFSQSPPGSGLDWSPAALQALLQEWAMTSASLLACFDDVLNIPEFLTVSIQEMTKHLDFFPWALRSGDSREFSPLVAYLQGRAIHIVQVMRRYVDQNRDPIFRNGLRVLVQQLEQSSRVLGAAAQHCSGGHGSQNTDALLTVAKHLIYSAQSIRVGLDGTNHPDILSPLRDQVQRFAMAKRQPYFICPSLQDCTVPKLKHQRKPGLGKSDPGTSYSPRDHLSCPLILDPCPQRQGSPLPATSKPVLVVESQSHQGVTSTCSMLQEQDAAKDAASEALAGEGSMESERMKGLQEVPPLAPSVIDLAKEIEHCTTPRTDELLEVALQLSGRTRETRKGSVAIAGDWYSLCQQLFCNSPAADLPGNVAVFMELQQNLASMVQLAAKSGPVDLGKKDSDSTGHPEAYLQIQCRLEEAETHAKQLLDKVLASNGFQAPRLWEESIKDSCLMWSVAVQDLLQSLERLSGRQGLFLLPLRQAVKDQQGLQEGLAQAADVSQRLQEASRLSCLQCGDEQVKGEISFLCREVHVLTDALLDVAPILASFPKPSPSLSTRFDLLCLELTFQAKALTGHLSSINADSEHALQDAFSPRLSVCTDTQTGTESSLERMVSGIQAVQGIVAGGQEPGPCREDLPRALESILITKEVAQRVPVLQKHSEDWLQWELAAKALHTMAQLQAWKGGHTQACRLLAQCLKPKDEQDPAQPQLHHGDGAAGAAAVSSVDSQGAATGDTPGSSVGTRNADPVIAGTNAADLGKQQHSHSPCSPASCPAWLHVEMDQSLPEHGGMDSGNRMTRITQEMAKEVFLMAQGLRRRGCVLTKDQLITSARKIATSGQNFAKLIQIIAKNCVDQRCSQELLRVVEQIQTMSKQLCIISSVKASLARSKCSEELLVENAQQLLCAVSKTVRAAEAASLRVSAEPQSGCWHRVDMQSNRWNSCHKLRGTW", "length": 1397, "header": "tr|A0A8W4FCU4-1|A0A5G2QNQ2_PIG Computationally mapped isoform of Vinculin OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A5G2QNQ2-1" }, "locus": { "chromosome": "3", "start_pos": 44057417, "end_pos": 44028408, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000098823.1", "url": "https://www.ensembl.org/id/ENSSSCT00000098823.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076673.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076673.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1184, "start_aa": "Thr", "end_pos": 1184, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1184", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FCU4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCU4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNQ2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNQ2" } ], "pmid": "" }, { "name": "adherens junction", "id": "GO:0005912", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005912", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNQ2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNQ2" } ], "pmid": "" }, { "name": "catenin complex", "id": "GO:0016342", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016342", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNQ2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNQ2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "cell migration", "id": "GO:0016477", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016477", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNQ2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNQ2" } ], "pmid": "" }, { "name": "cell-cell adhesion", "id": "GO:0098609", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098609", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNQ2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNQ2" } ], "pmid": "" }, { "name": "cell adhesion", "id": "GO:0007155", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007155", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNQ2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNQ2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "actin filament binding", "id": "GO:0051015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051015", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNQ2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNQ2" } ], "pmid": "" }, { "name": "beta-catenin binding", "id": "GO:0008013", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008013", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNQ2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNQ2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 321, "end_pos": 323, "annotation": "n_glycosylation_sequon" }, { "start_pos": 96, "end_pos": 98, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 1184 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 321, "end_pos": 323 }, { "start_pos": 96, "end_pos": 98 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QNS7-1", "uniprot_ac": "A0A5G2QNS7", "uniprot_id": "A0A5G2QNS7_PIG", "mass": { "chemical_mass": 92353.0, "monoisotopic_mass": 92353.0 }, "refseq": { "ac": "XP_013837916", "name": "transmembrane protease serine 7", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013837916" }, "gene_names": [ { "name": "TMPRSS7", "type": "recommended", "evidence": [ { "id": "A0A5G2QNS7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNS7" } ] }, { "name": "TMPRSS7", "type": "synonym", "evidence": [ { "id": "XP_013837916", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013837916" } ] } ], "protein_names": [ { "name": "Transmembrane protease serine 7", "type": "recommended", "evidence": [ { "id": "A0A5G2QNS7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNS7/entry#names_and_taxonomy" } ] }, { "name": "Matriptase-3", "type": "synonym", "evidence": [ { "id": "A0A5G2QNS7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNS7/entry#names_and_taxonomy" } ] }, { "name": "transmembrane protease serine 7", "type": "synonym", "evidence": [ { "id": "XP_013837916", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013837916" } ] } ], "function": [ { "annotation": "Serine protease which preferentially hydrolyzes peptides with Arg at the P1 position.", "evidence": [ { "database": "UniProtKB", "id": "I3LST5", "url": "https://www.uniprot.org/uniprotkb/I3LST5#function" }, { "database": "UniProtKB", "id": "ARBA00057398", "url": "https://www.uniprot.org/uniprotkb/ARBA00057398#function" }, { "database": "UniProtKB", "id": "A0A5G2QNS7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNS7#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNS7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNS7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TMPRSS7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNS7", "locus": { "chromosome": "13", "start_pos": 147686913, "end_pos": 147728803, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000025721", "url": "https://www.ensembl.org/id/ENSSSCG00000025721" } ] } } ], "crossref": [ { "id": "A0A5G2QNS7", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QNS7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000025721", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000025721", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00041", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00041", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd00112", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00112", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd00190", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00190", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100627225", "url": "https://www.ncbi.nlm.nih.gov/gene/100627225", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000082", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000082", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000859", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000859", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001254", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001254", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001314", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001314", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002172", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002172", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009003", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009003", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018114", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018114", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023415", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023415", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR033116", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033116", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035914", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035914", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036055", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036055", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036364", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036364", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043504", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043504", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100627225", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627225", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WVFIFRR", "url": "https://omabrowser.org/oma/group/WVFIFRR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QNS7", "url": "https://www.orthodb.org/?gene=A0A5G2QNS7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24252", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24252", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24252:SF12", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24252:SF12", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00057", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00057", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00089", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00089", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00431", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00431", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01390", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01390", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013837916", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013837916", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QNS7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNS7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QNS7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNS7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LST5", "url": "https://www.uniprot.org/uniprotkb/I3LST5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LST5-1", "url": "https://www.uniprot.org/uniprotkb/I3LST5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDKENSDVSSKPADVNISNISVQVVSAQGKLAGRRPPRKLVSKAKPKKPPKKKVPFWNVQNKIILLTVFLFILAVVAWTLLWLYISKTESRDAFYFVGMFRVTNIEFLPEYRQKESREFLSVARTVQQVVNLVYTTSAFSKFYKQSVVADVSSNNKGGLLVHFWLVFVMPHAKGHVFCEDCVAAILKDSIQTSIVNRTSVGSLQGLAVDMDSVVLNAGLRSDYSSTIGSDKGCSQYFYADHLSLRYPLEISTTSGRLMCHFKLVAVVGHLIRLSIESVQIEADNCVTDSLTIYDSLLPIRSTILYRICEPTRTLMSFVSTNNLMLVTFKSPQVRRLSGIRAYFEVIPEQKCENTLLVKEITGFEGKISSPYYPSYYPPKCKCTWKFQTPLPTLGIALKFHNYSITKKSVKGCDHGWWEINEHMYCGSYVDHQTIFRVPSPLVHIQLQCSSRLSDKPLLAEYGSYNISQPCPVGSFRCSSGLCVPQAQRCDGVNDCFDESDELFCVTLKPACNVSSFRQQGPLVCDGFRDCEDGQDEQNCTQSIPCNHRTSKCGNDICIRKQNAGCDGAVDCPDGSDEEGCSCSRSSSTLHRIIGGTDTQEGGWPWQVSLHFVGSAYCGASVISREWLLSAAHCFHGNRLSDPTPWTAHLGMYVQGNAKFVSPVRRIVVHEYYNSQTFDYDIALLQLSIAWPETLKQLIQPICIPPAGQKVRSGEKCWVTGWGRKHEADNKGSPVLQQAEVELIDQTVCVSTYGIITSRMLCAGVMSGKKDACRGDSGGPLSCRRKSDGKWILTGIVSWGHGCGRPNFPGVYTRVSNFVPWIHKYVPSLL", "length": 829, "header": "tr|A0A5G2QNS7-1|A0A5G2QNS7_PIG Isoform 1 of Transmembrane protease serine 7 OS=Sus scrofa OX=9823 GN=TMPRSS7 PE=4 SV=1 CANONICAL=A0A5G2QNS7-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QNS7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNS7/entry", "sequence": { "sequence": "MDKENSDVSSKPADVNISNISVQVVSAQGKLAGRRPPRKLVSKAKPKKPPKKKVPFWNVQNKIILLTVFLFILAVVAWTLLWLYISKTESRDAFYFVGMFRVTNIEFLPEYRQKESREFLSVARTVQQVVNLVYTTSAFSKFYKQSVVADVSSNNKGGLLVHFWLVFVMPHAKGHVFCEDCVAAILKDSIQTSIVNRTSVGSLQGLAVDMDSVVLNAGLRSDYSSTIGSDKGCSQYFYADHLSLRYPLEISTTSGRLMCHFKLVAVVGHLIRLSIESVQIEADNCVTDSLTIYDSLLPIRSTILYRICEPTRTLMSFVSTNNLMLVTFKSPQVRRLSGIRAYFEVIPEQKCENTLLVKEITGFEGKISSPYYPSYYPPKCKCTWKFQTPLPTLGIALKFHNYSITKKSVKGCDHGWWEINEHMYCGSYVDHQTIFRVPSPLVHIQLQCSSRLSDKPLLAEYGSYNISQPCPVGSFRCSSGLCVPQAQRCDGVNDCFDESDELFCVTLKPACNVSSFRQQGPLVCDGFRDCEDGQDEQNCTQSIPCNHRTSKCGNDICIRKQNAGCDGAVDCPDGSDEEGCSCSRSSSTLHRIIGGTDTQEGGWPWQVSLHFVGSAYCGASVISREWLLSAAHCFHGNRLSDPTPWTAHLGMYVQGNAKFVSPVRRIVVHEYYNSQTFDYDIALLQLSIAWPETLKQLIQPICIPPAGQKVRSGEKCWVTGWGRKHEADNKGSPVLQQAEVELIDQTVCVSTYGIITSRMLCAGVMSGKKDACRGDSGGPLSCRRKSDGKWILTGIVSWGHGCGRPNFPGVYTRVSNFVPWIHKYVPSLL", "length": 829, "header": "tr|A0A5G2QNS7-1|A0A5G2QNS7_PIG Isoform 1 of Transmembrane protease serine 7 OS=Sus scrofa OX=9823 GN=TMPRSS7 PE=4 SV=1 CANONICAL=A0A5G2QNS7-1" }, "locus": { "chromosome": "13", "start_pos": 147726092, "end_pos": 147686998, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000085956.2", "url": "https://www.ensembl.org/id/ENSSSCT00000085956.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063743.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063743.1" } ] } }, { "isoform_ac": "I3LST5-1", "url": "https://www.uniprot.org/uniprotkb/I3LST5/entry", "sequence": { "sequence": "MDKENSDVSSKPADVNISNISVQVVSAQGKLAGRRPPRKLVSKAKPKKPPKKKVPFWNVQNKIILLTVFLFILAVVAWTLLWLYISKTESRDAFYFVGMFRVTNIEFLPEYRQKESREFLSVARTVQQVVNLVYTTSAFSKFYKQSVVADVSNNKGGLLVHFWLVFVMPHAKGHVFCEDCVAAILKDSIQTSIVNRTSVGSLQGLAVDMDSVVLNDKGCSQYFYADHLSLRYPLEISTTSGRLMCHFKLVAVVGHLIRLSIESVQIEADNCVTDSLTIYDSLLPIRSTILYRICEPTRTLMSFVSTNNLMLVTFKSPQVRRLSGIRAYFEVIPEQKCENTLLVKEITGFEGKISSPYYPSYYPPKCKCTWKFQTPLPTLGIALKFHNYSITKKSVKGCDHGWWEINEHMYCGSYVDHQTIFRVPSPLVHIQLQCSSRLSDKPLLAEYGSYNISQPCPVGSFRCSSGLCVPQAQRCDGVNDCFDESDELFCVTLKPACNVSSFRQQGPLVCDGFRDCEDGQDEQNCTQSIPCNHRTSKCGNDICIRKQNAGCDGAVDCPDGSDEEGCSCSRSSSTLHRIIGGTDTQEGGWPWQVSLHFVGSAYCGASVISREWLLSAAHCFHGNRLSDPTPWTAHLGMYVQGNAKFVSPVRRIVVHEYYNSQTFDYDIALLQLSIAWPETLKQLIQPICIPPAGQKVRSGEKCWVTGWGRKHEADNKGSPVLQQAEVELIDQTVCVSTYGIITSRMLCAGVMSGKKDACRGDSGGPLSCRRKSDGKWILTGIVSWGHGCGRPNFPGVYTRVSNFVPWIHKYVPSLL", "length": 815, "header": "tr|I3LST5-1|A0A5G2QNS7_PIG Computationally mapped isoform of Transmembrane protease serine 7 OS=Sus scrofa OX=9823 GN=TMPRSS7 PE=4 SV=3 CANONICAL=A0A5G2QNS7-1" }, "locus": { "chromosome": "13", "start_pos": 147726092, "end_pos": 147686998, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024472.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024472.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000027178.3", "url": "https://www.ensembl.org/id/ENSSSCP00000027178.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LST5", "url": "https://www.uniprot.org/uniprotkb/I3LST5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100627225", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627225", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0XK34-1", "protein_name": "Transmembrane serine protease 7", "gene_name": "TMPRSS7", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MDERIDHPAAKPEDDLSVANISVQMVSAEDKLVKRILARKKHGKLKKKEKMLWNFQNQIILFTLILFVLGVVTWTLLWLFIVQAENKDALYFVGLFRVANIEFLPEYRQKESKEFLSVAQNVQRVMNLVYTTSSFSKFYKQSTVTEVSNNNNGGLLIHFWIVFVVPQAKGQALCEDCVAAILKDSIQTSIVNRTSVGTLQDLAVDMDSIVLSAGLRSDYWSTTGTGSNCVYDLHADRLHEHFPLDIHTTSGGTICYLKLIALVGHLIRLSVVSLQIEADNCITDSLTIYDSLMPIKHKTLYRACEPADSLVSLVSTNNLMLVIFKAAHIKEQKGFHGYFEVITQERCGKAIVTKERIGYEGRITSPYYPSYYPPKCLCVWNFQTPQKNLGIALKFHNYTISEKNIKGCERGWWKINEHMYCGFYVDHQTVFHVASSAVNIELQCSSKVSEKPLLVEYGSYNISQPCPPGYFKCSTGLCIQQMQRCDGVNNCFDESDELFCVVPEWNCNSSFAIQDNLLVCNGVNDCENGEDEQNCTESIPCTNHTFKCRNNVCIKKQNAKCDGTVDCTDGSDESSCRCGSSKNGNLISRIVGGTNSKEGEWPWQVSLHFVGAAYCGASVISKEWLVSAAHCFQGSKLADPRAWRAHLGMRIQGRAKFVSAVRRIIVHEYYNSRNYDYDIALLQLSKPWPDTMSHVIQPICVPPFSHKVRSGDKCWITGWGQKQEADDEGAAILQKAEVEIIDQTLCHSTYGIITARMFCAGLMSGRRDGCKGDSGGPLSCQSNEDGKWFLTGIVSWGYGCGRPNFPGVYTRVSNLAPWIYKHVPSVM", "length": 827 }, "evidence": [ { "id": "A0A5G2QNS7", "url": "https://omabrowser.org/oma/group/A0A5G2QNS7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E1BCX6-1", "protein_name": "Transmembrane protease serine 7", "gene_name": "TMPRSS7", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MFRITNIEFLPEYRQKESREFLSVARTVQQVINLVYTTSAFSKFYKQSVVADVSNNKGGLLVHFWLVFVMPHAKGHIFCEDCVAAILKDSIQTSIINRTSVGSLQGLAVDMDSVVLNDKGCSQDFYADHLSLRYPLEISTTSGRLMCHFKLVATVGHLIRLSIESVQIEADNCVTDSLTIYDSLLPIRSTILYRICEPARTLKSFVSTNNLMLVTFKSPQVWRLSGIWAYFEVIPEQKCENTVLVKEITGFEGKISSPYYPSYCPPKCKCTWKFQSPLSTLGIALKFHNYSITKKSMKGCDHGWWEINDHTYCGSYMDHQTIFRVPSPLVHIQLQCSSRLSDKPLLVEYGSYNISQPCPVGSFRCSSGVCVPQAQRCDGVNDCFDESDELFCVTLKPACNASSFGQQSPLICDGFQDCEDGQDEQNCTRSIPCNDRTFKCGNDVCIRKQNAKCDGNVDCPDGTDEEGCRCSSSSPTLHRIIGGTDTQEGGWPWQVSLHFVGSAYCGASVISREWLLSAAHCFHGSRLSDPTPWTAHLGMNVQGNAKFISPVRRIVVHEYYNSQTFDYDIALLQLSVAWPETLKQLIQPICIPPAGQKVRSGEKCWVTGWGRRHEADNKGSPILQQAEVELIDQTLCVSTYGIITSRMLCAGVMSGKKDACRGDSGGPLSCRRKSDGKWILTGIVSWGHGCGRPNFPGVYTRVSNFVPWIHKYVPSLL", "length": 717 }, "evidence": [ { "id": "A0A5G2QNS7", "url": "https://omabrowser.org/oma/group/A0A5G2QNS7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P86091-1", "protein_name": "Transmembrane protease serine 7", "gene_name": "Tmprss7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDKEKSDPSCKSSDLKISNISIQVVSVPGKLPGRRLPRKPIGKARPRKQPKKRAPFWNVQNKIILFTVFLFILAVTAWTLLWLYISKTDSKDAFYFVGMFRITNIEFLPEYRQKESREFLSMAKTVQQVVNLVYTTSAFSKFYKQSVVADVSSNNKGGLLVHFWIVFVMPHAKGHIFCEECVAAILKDSIQTSITNRTSVGTLQGLAVDMDSVVLNAGLRSDYSSAVGSDNGCSQYFYADHLTLRYPLEISATSGQLMCHFKLVAIVGYLIRLSIESIQLEADNCITDSLTVYDSLLPIRITCVLLSGYRICEPTRTLMSFVSTNNLMLVTLKSPYVRRLAGIRAYFEVIPEQKCENTILVKEINSFEGKISSPYYPSYYPPKCKCNWTFQTSLSTLGIALKFHNYSITKKSMKGCEHGWWEINEHMYCGSYMDHETIFRVPSPLVHIQLQCSSRLSDKPLLVEYGSYNISQPCPAGSFRCSSGLCVPQAQRCDGVNDCFDESDELFCVTAKPACNTSIFRQHGPLVCDGFQDCEDGQDEQNCTRSIPCTNRTFKCGNDICFRKQNAQCDGIVDCPDRSDEEGCGCSRSSPFLHRVVGGSDSQEGTWPWQVSLHFVGSAHCGASVISREWLLSAAHCFHGNRLSDPTPWTAHLGMYVQGNAKFVSPVRRIVVHEYYNSQTFDYDIALLQLSIAWPETLRQLIQPICIPPVGQRVRSGEKCWVTGWGRRHEADSKGSPILQQAEVELIDQTVCVSTYGIITSRMLCAGVMSGKSDACKGDSGGPLSCRRKSDGKWILTGIVSWGYGCGRPNFPGVYTRVSNFVPWIHKYVPSLL", "length": 833 }, "evidence": [ { "id": "A0A5G2QNS7", "url": "https://omabrowser.org/oma/group/A0A5G2QNS7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7RTY8-1", "protein_name": "Transmembrane protease serine 7", "gene_name": "TMPRSS7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDKENSDVSAAPADLKISNISVQVVSAQKKLPVRRPPLPGRRLPLPGRRPPQRPIGKAKPKKQSKKKVPFWNVQNKIILFTVFLFILAVIAWTLLWLYISKTESKDAFYFAGMFRITNIEFLPEYRQKESREFLSVSRTVQQVINLVYTTSAFSKFYEQSVVADVSSNNKGGLLVHFWIVFVMPRAKGHIFCEDCVAAILKDSIQTSIINRTSVGSLQGLAVDMDSVVLNAGLRSDYSSTIGSDKGCSQYFYAEHLSLHYPLEISAASGRLMCHFKLVAIVGYLIRLSIKSIQIEADNCVTDSLTIYDSLLPIRSSILYRICEPTRTLMSFVSTNNLMLVTFKSPHIRRLSGIRAYFEVIPEQKCENTVLVKDITGFEGKISSPYYPSYYPPKCKCTWKFQTSLSTLGIALKFYNYSITKKSMKGCEHGWWEINEHMYCGSYMDHQTIFRVPSPLVHIQLQCSSRLSDKPLLAEYGSYNISQPCPVGSFRCSSGLCVPQAQRCDGVNDCFDESDELFCVSPQPACNTSSFRQHGPLICDGFRDCENGRDEQNCTQSIPCNNRTFKCGNDICFRKQNAKCDGTVDCPDGSDEEGCTCSRSSSALHRIIGGTDTLEGGWPWQVSLHFVGSAYCGASVISREWLLSAAHCFHGNRLSDPTPWTAHLGMYVQGNAKFVSPVRRIVVHEYYNSQTFDYDIALLQLSIAWPETLKQLIQPICIPPTGQRVRSGEKCWVTGWGRRHEADNKGSLVLQQAEVELIDQTLCVSTYGIITSRMLCAGIMSGKRDACKGDSGGPLSCRRKSDGKWILTGIVSWGHGSGRPNFPGVYTRVSNFVPWIHKYVPSLL", "length": 843 }, "evidence": [ { "id": "A0A5G2QNS7", "url": "https://omabrowser.org/oma/group/A0A5G2QNS7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8BIK6-1", "protein_name": "Transmembrane protease serine 7", "gene_name": "Tmprss7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDKEKSDPSCKSSDLKISNISIQVVSVPGKLPGRRPPRKPIGKPRPRKQPKKRAPFWNVQNKIILFTVFLFILAVTAWTLLWLYISKTESKDAFYFVGMFRITNIEFLPEYRQKESREFLSMAKTVQQVVNLVYTTSAFSKFYKQSVVADVSSNNKGGLLVHFWIVFVMPHAKGHIFCEECVAAILKDSIQTSIINRTSVGSLQGLAVDMDSVVLNAGLRSDYSSAVGSDNGCSRYLYADHLTLRYPLEISATSGQLMCHFKLVAIVGYLIRLSIESIQLEADNCITDSLTVYDSLLPIRSAILYRICEPTRTLMSFVSTNNLMLVILKSPYVRRLAGIRAYFEVIPEQKCESTILVKEINSFEGKISSPYYPSYYPPKCKCTWTFQTSLSTLGIALKFYNYSITKKSAKGCEHGWWEINEHMYCGSYMDHETIFRVPSPLVHIQLQCSSRLSDKPLLVEYGGYNISQPCPAGSFRCSSGLCVPQAQRCDGVNDCFDESDELFCVTVKPACNSSSFRQHGPLVCDGFRDCEDGQDEQNCTRSIPCTSRTFKCGNDICFRKQNAQCDGIVDCPDGSDEEGCGCSRSSSFLHRIVGGSDSQEGTWPWQVSLHFVGSAYCGASVISREWLLSAAHCFHGNRLSDPTPWTAHLGMYVQGNAKFISPVRRIVVHEYYNSQTFDYDIALLQLSIAWPETLKQLIQPICIPPAGQKVRSGEKCWVTGWGRRHEADSKGSPVLQQAEVELIDQTVCVSTYGIITSRMLCAGVMSGKSDACKGDSGGPLSCRRKSDGKWILTGIVSWGHGCGRPNFPGVYTRVSSFVPWIHKYVPSLL", "length": 829 }, "evidence": [ { "id": "A0A5G2QNS7", "url": "https://omabrowser.org/oma/group/A0A5G2QNS7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "serine-type endopeptidase activity", "id": "GO:0004252", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004252", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNS7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNS7" } ], "pmid": "" }, { "name": "serine-type peptidase activity", "id": "GO:0008236", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008236", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNS7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNS7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNS7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNS7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "protein processing", "id": "GO:0016485", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016485", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNS7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNS7" } ], "pmid": "" }, { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNS7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNS7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 16, "end_pos": 18, "annotation": "n_glycosylation_sequon" }, { "start_pos": 196, "end_pos": 198, "annotation": "n_glycosylation_sequon" }, { "start_pos": 19, "end_pos": 21, "annotation": "n_glycosylation_sequon" }, { "start_pos": 401, "end_pos": 403, "annotation": "n_glycosylation_sequon" }, { "start_pos": 465, "end_pos": 467, "annotation": "n_glycosylation_sequon" }, { "start_pos": 512, "end_pos": 514, "annotation": "n_glycosylation_sequon" }, { "start_pos": 538, "end_pos": 540, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QNS7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 829, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QNS7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QNS7" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QNS7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNS7" }, { "id": "PS01180", "database": "PROSITE", "url": "https://prosite.expasy.org/PS01180" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CUB", "eco_id": "ECO_0000259", "start_pos": 233, "end_pos": 346, "start_aa": "Cys", "end_aa": "Ile", "glycosite_overlap": [] }, { "evidence": [ { 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} ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 16, "end_pos": 18 }, { "start_pos": 196, "end_pos": 198 }, { "start_pos": 19, "end_pos": 21 }, { "start_pos": 401, "end_pos": 403 }, { "start_pos": 465, "end_pos": 467 }, { "start_pos": 512, "end_pos": 514 }, { "start_pos": 538, "end_pos": 540 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QNS8-1", "uniprot_ac": "A0A5G2QNS8", "uniprot_id": "A0A5G2QNS8_PIG", "mass": { "chemical_mass": 71297.0, "monoisotopic_mass": 71297.0 }, "refseq": { "ac": "XP_005673658", "name": "potassium voltage-gated channel subfamily D member 1 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005673658" }, "gene_names": [ { "name": "KCND1", "type": "recommended", "evidence": [ { "id": "A0A5G2QNS8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNS8" } ] }, { "name": "KCND1", "type": "synonym", "evidence": [ { "id": "XP_005673658", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005673658" } ] } ], "protein_names": [ { "name": "A-type voltage-gated potassium channel KCND1", "type": "recommended", "evidence": [ { "id": "A0A5G2QNS8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNS8/entry#names_and_taxonomy" } ] }, { "name": "Potassium voltage-gated channel subfamily D member 1", "type": "synonym", "evidence": [ { "id": "A0A5G2QNS8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNS8/entry#names_and_taxonomy" } ] }, { "name": "Voltage-gated potassium channel subunit Kv4.1", "type": "synonym", "evidence": [ { "id": "A0A5G2QNS8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNS8/entry#names_and_taxonomy" } ] }, { "name": "potassium voltage-gated channel subfamily D member 1 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_005673658", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005673658" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNS8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNS8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KCND1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNS8", "locus": { "chromosome": "X", "start_pos": 43032358, "end_pos": 43041760, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000028284", "url": "https://www.ensembl.org/id/ENSSSCG00000028284" } ] } } ], "crossref": [ { "id": "A0A5G2QNS8", "url": 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"ssc:100511653", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511653", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "G protein-coupled receptor activity", "id": "GO:0004930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004930", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNV9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNV9" } ], "pmid": "" }, { "name": "olfactory receptor activity", "id": "GO:0004984", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004984", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNV9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNV9" } ], "pmid": "" }, { "name": "odorant binding", "id": "GO:0005549", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005549", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNV9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNV9" } ], "pmid": "" } ] }, { "name": 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OX=9823 GN=DSC3 PE=4 SV=1 CANONICAL=A0A5G2QNX5-1" }, "locus": { "chromosome": "6", "start_pos": 114963359, "end_pos": 114920762, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076047.1", "url": "https://www.ensembl.org/id/ENSSSCT00000076047.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066400.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066400.1" } ] } }, { "isoform_ac": "I3LRH7-1", "url": "https://www.uniprot.org/uniprotkb/I3LRH7/entry", "sequence": { "sequence": "MAAAGSRSSLRGARGQLLLTLLVFSFACEACRKVIFNIPSKLEADKLVGRVDLKECLRSADLIQSSDPDFRVLEDGTVYTARTVVLSDEKRSFTIWLSNTKAQTQKELPVLLKHQKKVLRKRNTKETILRRSKRRWAPIPCSMQENSLGPFPLLLQQVQSDAAQNYTIFYSISGRGVDQEPLNLFFIERDTGNLYCTQPVDREEYDVFDLIAYASTADGYSADLPLPLPIRVEDENDNYPIFTEEVYNFEVLESSRHGTTVGVVCATDKDEPDTMHTRLKYSILNQTPRSPGLFSVHPSTGVITTVSQNLDREVVDKYSLIMKVQDMDGQFFGLTTTATCIITVKDSNDNLPTFRQNAYEVSVEENTVNKEILRIPVEDKDLINTANWRANFTILKGNENGHFKITTDKETNEGVLCVVKPLNYEENHQVVLEIGLSNEAPFSRDAALRMTTMNRALVTVHVKDQDEGPDCSPAVQYVRIKENLAVGSKINGYKAYDPETGRSSGLRYKKLNDPKGWITINEISGLIETSKTLDREAAGPRKDLYNITVMAIDQDGRSCTGTLAVDIEDVNDNPPEILQHYLVICKPKMAYTDISATDPDESINGAPFYFSLANASPEINRLWTLTRVNDTAARLSYRKNAEFQEYYIPVTVKDRAGQSARKTLRVNLCDCTHPSQCYARSARVVLGKWAILAILLGIALLFSILATLVCGLVNAGKRKSFPEDLTQQNLIISNTEAPGDDKVCSANGFTTQTVNSSSQGFCGTLGSAVKNGGQETIEMVKGGHQTLESCRGMGHHHTLDSCRGGAVEMDNTRYSYSEWHSFTQPRLGEESIRGHTG", "length": 837, "header": "tr|I3LRH7-1|A0A5G2QNX5_PIG Computationally mapped isoform of Desmocollin 3 OS=Sus scrofa OX=9823 GN=DSC3 PE=4 SV=4 CANONICAL=A0A5G2QNX5-1" }, "locus": { "chromosome": "6", "start_pos": 114963359, "end_pos": 114921052, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029720.4", "url": "https://www.ensembl.org/id/ENSSSCT00000029720.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000026712.4", "url": "https://www.ensembl.org/id/ENSSSCP00000026712.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LRH7", "url": "https://www.uniprot.org/uniprotkb/I3LRH7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100623437", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623437", "resource": "KEGG Pathway" }, { "id": "R-SSC-6805567", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6805567", "resource": "Reactome", "description": "Keratinization" }, { "id": "R-SSC-6809371", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6809371", "resource": "Reactome", "description": "Formation of the cornified envelope" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2K230-1", "protein_name": "Desmocollin 3", "gene_name": "Dsc3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAMAMAVPELRSLPYRAPFTKFLLTLWVFSFVGEACKDVTFYVPSTLEADKIIGRVSLKECLSSADGIMPSDPDFRVLDDGSVYPTRAVVLSDEKRSFTIQLSDSKMRKQKEITVILERQKEVMMKRHTNETVLRRAKRRWAPIPCSMQENSLGPFPLFLQQVQSDSAQNYNIFYSISGRGVDQEPLNLFFIERDTGNLYCTRPVDREEYDVFDLIAYASTADGYSADLPLPLPIKVEDENDNYPLFTEAIYNFEVPESSRLGTVVGTVCATDKDEPDTMHTRLKYSILEQSPPSPGLFSVHPDTGVITTVSHYMDREVVDKYKLILKVQDMNGQFFGLISTSTCIITVQDSNDNAPTFRQNAYETSVEENTYNVEILRIPVDDKDMVNSANWKANFTILKGNENGWFKITTDPATNEGVLCVVKPLDYEENRQVTLEIGVNNEAPFIRDVASRIPTMNRAMVTVQVRDQNEGPECKPREQIVRIKENSAIGSKINGYKAYDPETKNSNGLRYKKLQDPKDWVSIEEVSGSLTISKILDREIMAPRNDLYNITVMAIDQEGRSCTGTLAVNIEDMNDNAPEIIQDDIVICKPRMGYTDISAVDPDEPIHGPPFQFALASSSPEVNRIWTLNQVNDTAARLSYQKTADVQIYSVPVTVTDRAGQSATKILRVNLCDCTHPSQCLLRSRRAGITLGKWAILAILLGIALLFSVLLTLVCGVVTAQKGKHFPEDLAQQNLIISNTEAPGDDRVCSANGFTTHTANNSSQGFCGTMGSGMRNGGQETIEMMKGHQTLDSCRVAGHHHTLDSCRGGHMETDNCRYTYSEWHSFTQPRLGEKLHVCNQNEDHIPSQDYVLTYNYEGRGSPAGSVGCCSEKQEEEGLDFLNNLEPKFLTLAETCTKR", "length": 900 }, "evidence": [ { "id": "A0A5G2QNX5", "url": "https://omabrowser.org/oma/group/A0A5G2QNX5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P55850-1", "protein_name": "Desmocollin-3", "gene_name": "Dsc3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVVPEFRSPQCRALCTKLLLTLWVFSFVGEACKKVTFHVPSTLEADKIIGRVSLKECLSSADGIMPSDPDFRVLDDGSVYPTRAVVLSDEKRSFTIQLSDSKMQTQKEIPVILEHKKKVLKKRHTKETVLRRSKRRWAPIPCSMQENSLGPFPLFLQQVQSDAAQNYTVFYSISGRGADQEPLNWFFIERDTGNLYCTRPVDREEYDVFDLIAYASTADGYSADLPLPLPIKIEDENDNYPLFTEAIYAFEVPEGSRLGTVVGTVCATDKDEPDTMHTRLKYSILEQTPPSPGLFSVHPDTGVITTVSHYMDREVVDKYKLIMKVQDMNGQFFGLISTSTCIITVQDSNDNAPTFRQNTYETAVEENTYNVEILRIPVDDKDMINTANWKANFTILKGNENGWFKITTDPVTNEGVLCVVKPLDYEENRQVTLEIGVNNEAPFIKDVANRIPTMNRAMVTVHVKDQNEGPECKPPEQYVRIKENSAVGSKINGYKAYDPETKNSNGLRYKKLQDPKDWVSIEEVSGLLTISKTLDREIMAPRNDMYNITVMAIDQEGKSCTGTLAVNIEDVNDNAPEIIQDYIVICKPKMGYTDISAVDPDEPIHGPPFQFNLANTSPEVNRIWTLNQVNDTAARLSYQKTADVQIYNVPVTVKDRAGQSATKILRVNLCDCTHPSQCPLRSRSAGITLGKWAILAILLGIALLFSVLLTLVCGVVTARKGKHFPEDLAQQNLIISNTEAPGDDRVCSANGFTTHTANNSSQGFCGTMGSGMRNGGQETIEMMKGHQTLDSCRVAGHHHTLDSGRGGHMDTDNCRYTYSEWHSFTQPRLGEKLHVCNQNEDHIPSQDYVLTYNYEGRGSPAGSVGCCSEKQEEEGLDFLNNLEPKFLTLAETCTKR", "length": 896 }, "evidence": [ { "id": "A0A5G2QNX5", "url": "https://omabrowser.org/oma/group/A0A5G2QNX5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q14574-1", "protein_name": "Desmocollin-3", "gene_name": "DSC3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAAGPRRSVRGAVCLHLLLTLVIFSRAGEACKKVILNVPSKLEADKIIGRVNLEECFRSADLIRSSDPDFRVLNDGSVYTARAVALSDKKRSFTIWLSDKRKQTQKEVTVLLEHQKKVSKTRHTRETVLRRAKRRWAPIPCSMQENSLGPFPLFLQQVESDAAQNYTVFYSISGRGVDKEPLNLFYIERDTGNLFCTRPVDREEYDVFDLIAYASTADGYSADLPLPLPIRVEDENDNHPVFTEAIYNFEVLESSRPGTTVGVVCATDRDEPDTMHTRLKYSILQQTPRSPGLFSVHPSTGVITTVSHYLDREVVDKYSLIMKVQDMDGQFFGLIGTSTCIITVTDSNDNAPTFRQNAYEAFVEENAFNVEILRIPIEDKDLINTANWRVNFTILKGNENGHFKISTDKETNEGVLSVVKPLNYEENRQVNLEIGVNNEAPFARDIPRVTALNRALVTVHVRDLDEGPECTPAAQYVRIKENLAVGSKINGYKAYDPENRNGNGLRYKKLHDPKGWITIDEISGSIITSKILDREVETPKNELYNITVLAIDKDDRSCTGTLAVNIEDVNDNPPEILQEYVVICKPKMGYTDILAVDPDEPVHGAPFYFSLPNTSPEISRLWSLTKVNDTAARLSYQKNAGFQEYTIPITVKDRAGQAATKLLRVNLCECTHPTQCRATSRSTGVILGKWAILAILLGIALLFSVLLTLVCGVFGATKGKRFPEDLAQQNLIISNTEAPGDDRVCSANGFMTQTTNNSSQGFCGTMGSGMKNGGQETIEMMKGGNQTLESCRGAGHHHTLDSCRGGHTEVDNCRYTYSEWHSFTQPRLGEKLHRCNQNEDRMPSQDYVLTYNYEGRGSPAGSVGCCSEKQEEDGLDFLNNLEPKFITLAEACTKR", "length": 896 }, "evidence": [ { "id": "A0A5G2QNX5", "url": "https://omabrowser.org/oma/group/A0A5G2QNX5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNX5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNX5" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNX5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNX5" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNX5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNX5" } ], "pmid": "" }, { "name": "desmosome", "id": "GO:0030057", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030057", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNX5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNX5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNX5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNX5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "cell-cell adhesion", "id": "GO:0098609", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098609", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNX5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNX5" } ], "pmid": "" }, { "name": "homophilic cell adhesion via plasma membrane adhesion molecules", "id": "GO:0007156", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007156", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNX5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNX5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 165, "end_pos": 167, "annotation": "n_glycosylation_sequon" }, { "start_pos": 285, "end_pos": 287, "annotation": "n_glycosylation_sequon" }, { "start_pos": 391, "end_pos": 393, "annotation": "n_glycosylation_sequon" }, { "start_pos": 546, "end_pos": 548, "annotation": "n_glycosylation_sequon" }, { "start_pos": 614, "end_pos": 616, "annotation": "n_glycosylation_sequon" }, { "start_pos": 629, "end_pos": 631, "annotation": "n_glycosylation_sequon" }, { "start_pos": 755, "end_pos": 757, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QNX5-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 894, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QP10-1", "uniprot_ac": "A0A5G2QP10", "uniprot_id": "A0A5G2QP10_PIG", "mass": { "chemical_mass": 34579.0, "monoisotopic_mass": 34579.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "L1 transposable element RRM domain-containing protein", "type": "recommended", "evidence": [ { "id": "A0A5G2QP10", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP10/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP10", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP10" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP10", "locus": {} } ], "crossref": [ { "id": "A0A5G2QP10", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QP10", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000051117", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000051117", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR004244", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004244", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035300", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035300", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042566", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042566", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043636", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043636", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR11505", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11505", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02994", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02994", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF17490", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17490", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QP10", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP10", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QP10-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP10-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKKLRNHPQSNQQENSPKTVNNETDLCSQTDLEFKREIVKILKELREDMNSNADTLRKELENIRRSQEKLEHSFAEMQTEPGAVKTRMNNAERISDMEDRIMEITQSGQQTENQIKKLESNIRDLWDNIKRANLRIIGIPEGVEKDKEMENIFEEIIDGNFPNLKDTGFKIQEAQRAPNKLNPNRPTPRHIIIKMAKVSDKERILKAAREKQNVTYKGTPIRISADFSTETLQARREWQEIFKVLKGKNMQPRILYPARISFKIEGEIKIFPNKQKLKEYSNTKPRLKEILKGLL", "length": 295, "header": "tr|A0A5G2QP10-1|A0A5G2QP10_PIG Isoform 1 of L1 transposable element RRM domain-containing protein OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A5G2QP10-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QP10-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP10/entry", "sequence": { "sequence": "MKKLRNHPQSNQQENSPKTVNNETDLCSQTDLEFKREIVKILKELREDMNSNADTLRKELENIRRSQEKLEHSFAEMQTEPGAVKTRMNNAERISDMEDRIMEITQSGQQTENQIKKLESNIRDLWDNIKRANLRIIGIPEGVEKDKEMENIFEEIIDGNFPNLKDTGFKIQEAQRAPNKLNPNRPTPRHIIIKMAKVSDKERILKAAREKQNVTYKGTPIRISADFSTETLQARREWQEIFKVLKGKNMQPRILYPARISFKIEGEIKIFPNKQKLKEYSNTKPRLKEILKGLL", "length": 295, "header": "tr|A0A5G2QP10-1|A0A5G2QP10_PIG Isoform 1 of L1 transposable element RRM domain-containing protein OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A5G2QP10-1" }, "locus": { "chromosome": "17", "start_pos": 48671697, "end_pos": 48670813, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068754.2", "url": "https://www.ensembl.org/id/ENSSSCT00000068754.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063818.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063818.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP10", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP10" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "retrotransposition", "id": "GO:0032197", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032197", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP10", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP10" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "single-stranded RNA binding", "id": "GO:0003727", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003727", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP10", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP10" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "ribonucleoprotein complex", "id": "GO:1990904", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990904", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP10", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP10" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 213, "end_pos": 215, "annotation": "n_glycosylation_sequon" }, { "start_pos": 22, "end_pos": 24, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QP10-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 295, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QP10-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QP10" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QP10", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP10" }, { "id": "PF02994", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02994" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "L1 transposable element RRM", "eco_id": "ECO_0000259", "start_pos": 131, "end_pos": 226, "start_aa": "Arg", "end_aa": "Asp", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A5G2QP10", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP10" }, { "id": "PF17490", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17490" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "L1 transposable element dsRBD-like", "eco_id": "ECO_0000259", "start_pos": 230, "end_pos": 292, "start_aa": "Glu", "end_aa": "Lys", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 213, "end_pos": 215 }, { "start_pos": 22, "end_pos": 24 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QP28-1", "uniprot_ac": "A0A5G2QP28", "uniprot_id": "A0A5G2QP28_PIG", "mass": { "chemical_mass": 83262.0, "monoisotopic_mass": 83262.0 }, "refseq": {}, "gene_names": [ { "name": "PPP1R12C", "type": "recommended", "evidence": [ { "id": "A0A5G2QP28", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP28" } ] } ], "protein_names": [ { "name": "Protein phosphatase 1 regulatory subunit", "type": "recommended", "evidence": [ { "id": "A0A5G2QP28", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP28/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Regulates myosin phosphatase activity.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP28", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP28#function" }, { "database": "UniProtKB", "id": "ARBA00055480", "url": "https://www.uniprot.org/uniprotkb/ARBA00055480#function" }, { "database": "UniProtKB", "id": "I3LEG2", "url": "https://www.uniprot.org/uniprotkb/I3LEG2#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP28", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP28" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PPP1R12C", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP28", "locus": { "chromosome": "6", "start_pos": 59325535, "end_pos": 59347175, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000027189", "url": "https://www.ensembl.org/id/ENSSSCG00000027189" } ] } } ], "crossref": [ { "id": "A0A5G2QP28", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QP28", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000027189", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000027189", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd21945", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd21945", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100626700", "url": "https://www.ncbi.nlm.nih.gov/gene/100626700", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017401", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017401", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR031775", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031775", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036770", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036770", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051226", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051226", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "I3LEG2", "url": "https://www.orthodb.org/?gene=I3LEG2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24179", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24179", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24179:SF27", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24179:SF27", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12796", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF15898", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15898", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QP28", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP28", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QP28-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP28-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FI63", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FI63", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FI63-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FI63-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LEG2", "url": "https://www.uniprot.org/uniprotkb/I3LEG2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LEG2-1", "url": "https://www.uniprot.org/uniprotkb/I3LEG2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSGEDGPGAGPGAAAAAARERRREQLRQWGARAGAEPGPGERRARTVRFERAAEFLAACAGGDLDEARLMLRAADPDPDAELDPSAPPPARAVLDSTNADGISALHQACIDENLEVVRFLVEQGATVNQADNEGWTPLHVAASCGYLDIARYLLSHGANIASVNSDGDLPLDLAESDAMEGLLKAEITRRGVDVEAAKRAEEELLLHDTRCWLNGGAMPEARHPRTGASALHVAAAKGYIEVMRLLLQAGYDPELRDGDGWTPLHAAAHWGVEDACRLLAEHGGGMDSLTHAGQRPCDLADEEVLSLLEELARKQEDLRNQKEASQSRGQEPPVPSSSRHRRSSVCRLSSREKISLQDLSKERRPGGAGGPPIRDEDEGEEGPSDSSPAESRTLNGISSPPPSSPQSPTTPEEASFPRRFGLQKTGSSGALGPTGGRAAEVASRAGLQRSASSSRLEGTSTQAREPRLARVTPTPSRKVPESSAPILEPESPGSPVKPNVPVASAAPPADSRDRRRIYQMPVRDEESESQRKARSRLMRQSRRSTQGVTLTDLKEAEKAAGKASEPEKSCPQSLDPSRRPRVPGLENSDGPAQREAPDGQGQGPPAAREHRRVGKERRGPAEGEEAEPVDRGPESRYLVGRKGLGLSVGLWARPLTPRLPHPSTPEGGPSSRRQRDLNPEPEPESEEPDGGFRKLYADLRSENERLREALTETTLQLAQLKVELERATQRQERFAERPALLELERFVSEGGGGGASCVSSLPSPCGRVRRAALPF", "length": 775, "header": "tr|A0A5G2QP28-1|A0A5G2QP28_PIG Isoform 1 of Protein phosphatase 1 regulatory subunit OS=Sus scrofa OX=9823 GN=PPP1R12C PE=1 SV=1 CANONICAL=A0A5G2QP28-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QP28-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP28/entry", "sequence": { "sequence": "MSGEDGPGAGPGAAAAAARERRREQLRQWGARAGAEPGPGERRARTVRFERAAEFLAACAGGDLDEARLMLRAADPDPDAELDPSAPPPARAVLDSTNADGISALHQACIDENLEVVRFLVEQGATVNQADNEGWTPLHVAASCGYLDIARYLLSHGANIASVNSDGDLPLDLAESDAMEGLLKAEITRRGVDVEAAKRAEEELLLHDTRCWLNGGAMPEARHPRTGASALHVAAAKGYIEVMRLLLQAGYDPELRDGDGWTPLHAAAHWGVEDACRLLAEHGGGMDSLTHAGQRPCDLADEEVLSLLEELARKQEDLRNQKEASQSRGQEPPVPSSSRHRRSSVCRLSSREKISLQDLSKERRPGGAGGPPIRDEDEGEEGPSDSSPAESRTLNGISSPPPSSPQSPTTPEEASFPRRFGLQKTGSSGALGPTGGRAAEVASRAGLQRSASSSRLEGTSTQAREPRLARVTPTPSRKVPESSAPILEPESPGSPVKPNVPVASAAPPADSRDRRRIYQMPVRDEESESQRKARSRLMRQSRRSTQGVTLTDLKEAEKAAGKASEPEKSCPQSLDPSRRPRVPGLENSDGPAQREAPDGQGQGPPAAREHRRVGKERRGPAEGEEAEPVDRGPESRYLVGRKGLGLSVGLWARPLTPRLPHPSTPEGGPSSRRQRDLNPEPEPESEEPDGGFRKLYADLRSENERLREALTETTLQLAQLKVELERATQRQERFAERPALLELERFVSEGGGGGASCVSSLPSPCGRVRRAALPF", "length": 775, "header": "tr|A0A5G2QP28-1|A0A5G2QP28_PIG Isoform 1 of Protein phosphatase 1 regulatory subunit OS=Sus scrofa OX=9823 GN=PPP1R12C PE=1 SV=1 CANONICAL=A0A5G2QP28-1" }, "locus": { "chromosome": "6", "start_pos": 59347064, "end_pos": 59326410, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087181.2", "url": "https://www.ensembl.org/id/ENSSSCT00000087181.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066648.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066648.1" } ] } }, { "isoform_ac": "A0A8W4FI63-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FI63/entry", "sequence": { "sequence": "MSGEDGPGAGPGAAAAAARERRREQLRQWGARAGAEPGPGERRARTVRFERAAEFLAACAGGDLDEARLMLRAADPDPDAELDPSAPPPARAVLDSTNADGISALHQACIDENLEVVRFLVEQGATVNQADNEGWTPLHVAASCGYLDIARYLLSHGANIASVNSDGDLPLDLAESDAMEGLLKAEITRRGVDVEAAKRAEEELLLHDTRCWLNGGAMPEARHPRTGASALHVAAAKGYIEVMRLLLQAGYDPELRDGDGWTPLHAAAHWGVEDACRLLAEHGGGMDSLTHAVRSPCPSPPQQSLPLQLRNQKEASQSRGQEPPVPSSSRHRRSSVCRLSSREKISLQDLSKERRPGGAGGPPIRDEDEGEEGPSDSSPAESRTLNGISSPPPSSPQSPTTPEEASFPRRFGLQKTGSSGALGPTGGRAAEVASRAGLQRSASSSRLEGTSTQAREPRLARVTPTPSRKVPESSAPILEPESPGSPVKPNVPVASAAPPADSRDRRRIYQMPVRDEESESQRKARSRLMRQSRRSTQGVTLTDLKEAEKAAGKASEPEKSCPQSLDPSRRPRVPGLENSDGPAQREAPDGQGQGPPAAREHRRVGKERRGPAEGEEAEPVDRGPESRYLVGRKGLGLSVGLWARPLTPRLPHPSTPEGGPSSRRQRDLNPEPEPESEEPDGGFRKLYADLRSENERLREALTETTLQLAQLKVELERATQRQERFAERPALLELERFVSEGGGGGASCVSSLPSPCGRVRRAALPF", "length": 766, "header": "tr|A0A8W4FI63-1|A0A5G2QP28_PIG Computationally mapped isoform of Protein phosphatase 1 regulatory subunit OS=Sus scrofa OX=9823 GN=PPP1R12C PE=1 SV=1 CANONICAL=A0A5G2QP28-1" }, "locus": { "chromosome": "6", "start_pos": 59347064, "end_pos": 59326410, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102659.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102659.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078573.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078573.1" } ] } }, { "isoform_ac": "I3LEG2-1", "url": "https://www.uniprot.org/uniprotkb/I3LEG2/entry", "sequence": { "sequence": "MSGEDGPGAGPGAAAAAARERRREQLRQWGARAGAEPGPGERRARTVRFERAAEFLAACAGGDLDEARLMLRAADPDPDAELDPSAPPPARAVLDSTNADGISALHQACIDENLEVVRFLVEQGATVNQADNEGWTPLHVAASCGYLDIARYLLSHGANIASVNSDGDLPLDLAESDAMEGLLKAEITRRGVDVEAAKRAEEELLLHDTRCWLNGGAMPEARHPRTGASALHVAAAKGYIEVMRLLLQAGYDPELRDGDGWTPLHAAAHWGVEDACRLLAEHGGGMDSLTHAGQRPCDLADEEVLSLLEELARKQEDLRNQKEASQSRGQEPPVPSSSRHRRSSVCRLSSREKISLQDLSKERRPGGAGGPPIRDEDEGEEGPSDSSPAESRTLNGISSPPPSSPQSPTTPEEASFPRRFGLQKTGSSGALGPTGGRAAEVASRAGLQRSASSSRLEGTSTQAREPRLARVTPTPSRKVPESSAPILEPESPGSPVKPNVPVASAAPPADSRDRRRIYQMPVRDEESESQRKARSRLMRQSRRSTQGVTLTDLKEAEKAAGKASEPEKSCPQSLDPSRRPRVPGLENSDGPAQREAPDGQGQGPPAAREHRRVGKERRGPAEGEEAEPVDRGPESSTPEGGPSSRRQRDLNPEPEPESEEPDGGFRKLYADLRSENERLREALTETTLQLAQLKVELERATQRQERFAERPALLELERFERRALERKAAELEEELKALSDLRADNQRLKDENAALIRVISKLSK", "length": 764, "header": "tr|I3LEG2-1|A0A5G2QP28_PIG Computationally mapped isoform of Protein phosphatase 1 regulatory subunit OS=Sus scrofa OX=9823 GN=PPP1R12C PE=1 SV=3 CANONICAL=A0A5G2QP28-1" }, "locus": { "chromosome": "6", "start_pos": 59347064, "end_pos": 59326084, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031255.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031255.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022450.3", "url": "https://www.ensembl.org/id/ENSSSCP00000022450.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 434, "start_aa": "Thr", "end_pos": 434, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr434", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 474, "start_aa": "Thr", "end_pos": 474, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr474", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FI63", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FI63" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "myosin phosphatase regulator activity", "id": "GO:0017020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017020", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP28", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP28" } ], "pmid": "" }, { "name": "enzyme inhibitor activity", "id": "GO:0004857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004857", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP28", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP28" } ], "pmid": "" }, { "name": "protein kinase binding", "id": "GO:0019901", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019901", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP28", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP28" } ], "pmid": "" }, { "name": "phosphatase regulator activity", "id": "GO:0019208", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019208", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP28", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP28" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP28", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP28" } ], "pmid": "" }, { "name": "stress fiber", "id": "GO:0001725", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001725", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP28", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP28" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP28", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP28" } ], "pmid": "" }, { "name": "neuron projection morphogenesis", "id": "GO:0048812", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048812", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP28", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP28" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QP28-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 775, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QP28-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QP28" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2QP28", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP28" }, { "id": "PF15898", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15898" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "cGMP-dependent protein kinase interacting", "eco_id": "ECO_0000259", "start_pos": 692, "end_pos": 746, "start_aa": "Phe", "end_aa": "Phe", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], 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"sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QP52-1", "uniprot_ac": "A0A5G2QP52", "uniprot_id": "A0A5G2QP52_PIG", "mass": { "chemical_mass": 35250.0, "monoisotopic_mass": 35250.0 }, "refseq": { "ac": "XP_001925102", "name": "olfactory receptor 4F3/4F16/4F29-like", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001925102" }, "gene_names": [ { "name": "LOC100154552", "type": "recommended", "evidence": [ { "id": "A0A5G2QP52", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP52" } ] }, { "name": "LOC100154552", "type": "synonym", "evidence": [ { "id": "XP_001925102", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001925102" } ] } ], "protein_names": [ { "name": "Olfactory receptor", "type": "recommended", "evidence": [ { "id": "A0A5G2QP52", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP52/entry#names_and_taxonomy" } ] }, { "name": "olfactory receptor 4F3/4F16/4F29-like", "type": "synonym", "evidence": [ { "id": "XP_001925102", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001925102" } ] } ], "function": [ { "annotation": "Putative odorant or sperm cell receptor.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP52", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP52#function" }, { "database": "UniProtKB", "id": "ARBA00003929", "url": "https://www.uniprot.org/uniprotkb/ARBA00003929#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QP52", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP52" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LOC100154552", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP52", "locus": {} } ], "crossref": [ { "id": "A0A5G2QP52", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QP52", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd15226", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd15226", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100154552", "url": "https://www.ncbi.nlm.nih.gov/gene/100154552", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000276", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000276", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000725", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000725", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050427", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050427", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100154552", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154552", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RLACTHT", "url": "https://omabrowser.org/oma/group/RLACTHT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QP52", "url": "https://www.orthodb.org/?gene=A0A5G2QP52", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR48002", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48002", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13853", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13853", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_001925102", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001925102", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QP52", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP52", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QP52-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP52-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNRDNHSVVSEFVFLGLTNSWEIQLLLFLFSSVFYVASMMGNSLILLTVTSDRHLHSPMYFLLANLSFIDLGVSSVFSPKMIYDLFRKHKVISFSGCITQIFFIHIIGGVEMVLLVATAFDRYVTICKPLHYLAIMSPKMCILFLVAAWIIGLVHSVVQLAFVVKLPFCGPNVLDSIYCDLPRFIKLACTDTYRLEFMVTANSGFISLGSFFILTISYIFILITVQKHSSGSSSKALSTLSTHVMVVVLFSGPFIFVYMWPHSTSNLDKFLAVFDAVLTPFLNSVIYTLRNKEMKVAMRKVCSQFFIYGRIS", "length": 312, "header": "tr|A0A5G2QP52-1|A0A5G2QP52_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN=LOC100154552 PE=3 SV=1 CANONICAL=A0A5G2QP52-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QP52-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QP52/entry", "sequence": { "sequence": "MNRDNHSVVSEFVFLGLTNSWEIQLLLFLFSSVFYVASMMGNSLILLTVTSDRHLHSPMYFLLANLSFIDLGVSSVFSPKMIYDLFRKHKVISFSGCITQIFFIHIIGGVEMVLLVATAFDRYVTICKPLHYLAIMSPKMCILFLVAAWIIGLVHSVVQLAFVVKLPFCGPNVLDSIYCDLPRFIKLACTDTYRLEFMVTANSGFISLGSFFILTISYIFILITVQKHSSGSSSKALSTLSTHVMVVVLFSGPFIFVYMWPHSTSNLDKFLAVFDAVLTPFLNSVIYTLRNKEMKVAMRKVCSQFFIYGRIS", "length": 312, "header": "tr|A0A5G2QP52-1|A0A5G2QP52_PIG Isoform 1 of 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A5G2QPJ7-1", "uniprot_ac": "A0A5G2QPJ7", "uniprot_id": "A0A5G2QPJ7_PIG", "mass": { "chemical_mass": 52998.0, "monoisotopic_mass": 52998.0 }, "refseq": {}, "gene_names": [ { "name": "FAH", "type": "recommended", "evidence": [ { "id": "A0A5G2QPJ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPJ7" } ] } ], "protein_names": [ { "name": "Fumarylacetoacetase", "type": "recommended", "evidence": [ { "id": "A0A5G2QPJ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPJ7/entry#names_and_taxonomy" } ] }, { "name": "3.7.1.2", "type": "synonym", "evidence": [ { "id": "A0A5G2QPJ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPJ7/entry#names_and_taxonomy" } ] }, { "name": "Fumarylacetoacetate hydrolase", "type": "synonym", "evidence": [ { "id": "A0A5G2QPJ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPJ7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QPJ7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPJ7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "FAH", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPJ7", "locus": { "chromosome": "7", "start_pos": 49087783, "end_pos": 49047902, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000001780", "url": "https://www.ensembl.org/id/ENSSSCG00000001780" } ] } } ], "crossref": [ { "id": "A0A5G2QPJ7", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2QPJ7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000001780", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000001780", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR005959", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005959", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011234", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011234", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015377", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015377", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036462", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036462", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036663", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036663", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "YWTAAQQ", "url": "https://omabrowser.org/oma/group/YWTAAQQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR43069", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43069", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR43069:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43069:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01557", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01557", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF09298", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09298", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8963684", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8963684", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "10244", "url": "https://www.rhea-db.org/rhea/10244", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QPJ7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPJ7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QPJ7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPJ7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FHS2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FHS2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FHS2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FHS2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RIF3", "url": "https://www.uniprot.org/uniprotkb/F1RIF3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RIF3-1", "url": "https://www.uniprot.org/uniprotkb/F1RIF3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSFVPVAEDSDFPIHNLPYGVFSTTGNSRPRIGVAIGDQILDLSVIKHLFTGPVLSKHQDVFDQPTLNSFMGLGQAAWKEARAFLQNLLSASQARLRDDTELRKRAFTSQASATMHLPAAIGDYTDFYSSRQHATNVGVMFRGKETALMPNWLHLPVAYHGRASSVVVSGTPIRRPMGQMRPDDSKPPVYGACKLLDMELEMAFFVGPGNRLGEPIPISKAHEHIFGMVLMNDWSARDIQKWEYVPLGPFLGKSFGTTISPWVVPMDALMPFAVPNPEQLLSQSPAHMTTLSPHCPGTQCWSLERSGLFILRSSVPEHRGSAAGPAWASSARLPMTLCSALPSQDPKPLPYLRHDQPYMFDINLSVALKGEGMSQAATICRSNFKYMYWTMLQQLTHHSVNGCNLQPGDLLGSGTISGPEPESFGSMLELSWRGTKAIELGNGQTRKFLLDGDEVIITGHCQGDGYRVGFGQCTGKVLPALSPA", "length": 484, "header": "tr|A0A5G2QPJ7-1|A0A5G2QPJ7_PIG Isoform 1 of Fumarylacetoacetase OS=Sus scrofa OX=9823 GN=FAH PE=1 SV=2 CANONICAL=A0A5G2QPJ7-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QPJ7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPJ7/entry", "sequence": { "sequence": "MSFVPVAEDSDFPIHNLPYGVFSTTGNSRPRIGVAIGDQILDLSVIKHLFTGPVLSKHQDVFDQPTLNSFMGLGQAAWKEARAFLQNLLSASQARLRDDTELRKRAFTSQASATMHLPAAIGDYTDFYSSRQHATNVGVMFRGKETALMPNWLHLPVAYHGRASSVVVSGTPIRRPMGQMRPDDSKPPVYGACKLLDMELEMAFFVGPGNRLGEPIPISKAHEHIFGMVLMNDWSARDIQKWEYVPLGPFLGKSFGTTISPWVVPMDALMPFAVPNPEQLLSQSPAHMTTLSPHCPGTQCWSLERSGLFILRSSVPEHRGSAAGPAWASSARLPMTLCSALPSQDPKPLPYLRHDQPYMFDINLSVALKGEGMSQAATICRSNFKYMYWTMLQQLTHHSVNGCNLQPGDLLGSGTISGPEPESFGSMLELSWRGTKAIELGNGQTRKFLLDGDEVIITGHCQGDGYRVGFGQCTGKVLPALSPA", "length": 484, "header": "tr|A0A5G2QPJ7-1|A0A5G2QPJ7_PIG Isoform 1 of Fumarylacetoacetase OS=Sus scrofa OX=9823 GN=FAH PE=1 SV=2 CANONICAL=A0A5G2QPJ7-1" }, "locus": { "chromosome": "7", "start_pos": 49087642, "end_pos": 49048037, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070849.2", "url": "https://www.ensembl.org/id/ENSSSCT00000070849.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064003.2", "url": "https://www.ensembl.org/id/ENSSSCP00000064003.2" } ] } }, { "isoform_ac": "A0A8W4FHS2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FHS2/entry", "sequence": { "sequence": "MSFVPVAEDSDFPIHNLPYGVFSTTGNSRPRIGVAIGDQILDLSVIKHLFTGPVLSKHQDVFDQPTLNSFMGLGQAAWKEARAFLQNLLSASQARLRDDTELRKRAFTSQASATMHLPAAIGDYTDFYSSRQHATNVGVMFRGKETALMPNWLHLPVAYHGRASSVVVSGTPIRRPMGQMRPDDSKPPVYGACKLLDMELEMAFFVGPGNRLGEPIPISKAHEHIFGMVLMNDWSARDIQKWEYVPLGPFLGKSFGTTISPWVVPMDALMPFAVPNPEQDPKPLPYLRHDQPYMFDINLSVALKGEGMSQAATICRSNFKYMYWTMLQQLTHHSVNGCNLQPGDLLGSGTISGPEPESFGSMLELSWRGTKAIELGNGQTRKFLLDGDEVIITGEGSEAWLPGTLNLSLRVPVVAQRVKNTLLSL", "length": 425, "header": "tr|A0A8W4FHS2-1|A0A5G2QPJ7_PIG Computationally mapped isoform of Fumarylacetoacetase OS=Sus scrofa OX=9823 GN=FAH PE=1 SV=1 CANONICAL=A0A5G2QPJ7-1" }, "locus": { "chromosome": "7", "start_pos": 49082425, "end_pos": 49048037, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000096766.1", "url": "https://www.ensembl.org/id/ENSSSCT00000096766.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078426.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078426.1" } ] } }, { "isoform_ac": "F1RIF3-1", "url": "https://www.uniprot.org/uniprotkb/F1RIF3/entry", "sequence": { "sequence": "MSFVPVAEDSDFPIHNLPYGVFSTTGNSRPRIGVAIGDQILDLSVIKHLFTGPVLSKHQDVFDQPTLNSFMGLGQAAWKEARAFLQNLLSASQARLRDDTELRKRAFTSQASATMHLPAAIGDYTDFYSSRQHATNVGVMFRGKETALMPNWLHLPVAYHGRASSVVVSGTPIRRPMGQMRPDDSKPPVYGACKLLDMELEMAFFVGPGNRLGEPIPISKAHEHIFGMVLMNDWSARDIQKWEYVPLGPFLGKSFGTTISPWVVPMDALMPFAVPNPEQDPKPLPYLRHDQPYMFDINLSVALKGEGMSQAATICRSNFKYMYWTMLQQLTHHSVNGCNLQPGDLLGSGTISGPEPESFGSMLELSWRGTKAIELGNGQTRKFLLDGDEVIITGLCSRRIWGGQAEKLEKASSLNLKKPMLAREEGNGNRLVEFPGTRIKIIIRQ", "length": 445, "header": "tr|F1RIF3-1|A0A5G2QPJ7_PIG Computationally mapped isoform of Fumarylacetoacetase OS=Sus scrofa OX=9823 GN=FAH PE=1 SV=3 CANONICAL=A0A5G2QPJ7-1" }, "locus": { "chromosome": "7", "start_pos": 49084422, "end_pos": 49048037, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000001995.5", "url": "https://www.ensembl.org/id/ENSSSCT00000001995.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000001946.4", "url": "https://www.ensembl.org/id/ENSSSCP00000001946.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FHS2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FHS2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-8963684", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8963684", "resource": "Reactome", "description": "Tyrosine catabolism" } ], "orthologs": [ { "uniprot_canonical_ac": "P16930-1", "protein_name": "Fumarylacetoacetase", "gene_name": "FAH", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSFIPVAEDSDFPIHNLPYGVFSTRGDPRPRIGVAIGDQILDLSIIKHLFTGPVLSKHQDVFNQPTLNSFMGLGQAAWKEARVFLQNLLSVSQARLRDDTELRKCAFISQASATMHLPATIGDYTDFYSSRQHATNVGIMFRDKENALMPNWLHLPVGYHGRASSVVVSGTPIRRPMGQMKPDDSKPPVYGACKLLDMELEMAFFVGPGNRLGEPIPISKAHEHIFGMVLMNDWSARDIQKWEYVPLGPFLGKSFGTTVSPWVVPMDALMPFAVPNPKQDPRPLPYLCHDEPYTFDINLSVNLKGEGMSQAATICKSNFKYMYWTMLQQLTHHSVNGCNLRPGDLLASGTISGPEPENFGSMLELSWKGTKPIDLGNGQTRKFLLDGDEVIITGYCQGDGYRIGFGQCAGKVLPALLPS", "length": 419 }, "evidence": [ { "id": "A0A5G2QPJ7", "url": "https://omabrowser.org/oma/group/A0A5G2QPJ7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P25093-1", "protein_name": "Fumarylacetoacetase", "gene_name": "Fah", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSFIPVAEDSDFPIQNLPYGVFSTQSNPKPRIGVAIGDQILDLSVIKHLFTGPVLSKHQHVFDETTLNSFMGLGQAAWKEARASLQNLLSASQAQLRDDKELRQRAFTSQASATMHLPATIGDYTDFYSSLQHATNVGIMFRGKENALLPNWLHLPVGYHGRASSVVVSGTPIRRPMGQMRPDNSKPPVYGASKRLDMELEMAFFVGPGNRFGEPIPISKAQEHIFGMVLMNDWSARDIQQWEYVPLGPFLGKSFGTTISPWVVPMDALMPFVVPNPKQDPKPLPYLCHSQPYTFDINLSVALKGEGMSQAATICRSNFKHMYWTILQQLTHHSVNGCNLRPGDLLASGTISGSDPESFGSMLELSWKGTKAIDVGQGQTRTFLLDGDEVIITGHCQGDGYRVGFGQCAGKVLPALSPA", "length": 419 }, "evidence": [ { "id": "A0A5G2QPJ7", "url": "https://omabrowser.org/oma/group/A0A5G2QPJ7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P35505-1", "protein_name": "Fumarylacetoacetase", "gene_name": "Fah", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSFIPVAEDSDFPIQNLPYGVFSTQSNPKPRIGVAIGDQILDLSVIKHLFTGPALSKHQHVFDETTLNNFMGLGQAAWKEARASLQNLLSASQARLRDDKELRQRAFTSQASATMHLPATIGDYTDFYSSRQHATNVGIMFRGKENALLPNWLHLPVGYHGRASSIVVSGTPIRRPMGQMRPDNSKPPVYGACRLLDMELEMAFFVGPGNRFGEPIPISKAHEHIFGMVLMNDWSARDIQQWEYVPLGPFLGKSFGTTISPWVVPMDALMPFVVPNPKQDPKPLPYLCHSQPYTFDINLSVSLKGEGMSQAATICRSNFKHMYWTMLQQLTHHSVNGCNLRPGDLLASGTISGSDPESFGSMLELSWKGTKAIDVEQGQTRTFLLDGDEVIITGHCQGDGYRVGFGQCAGKVLPALSPA", "length": 419 }, "evidence": [ { "id": "A0A5G2QPJ7", "url": "https://omabrowser.org/oma/group/A0A5G2QPJ7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q1ZXQ1-1", "protein_name": "Fumarylacetoacetase", "gene_name": "fah", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSILKSFIEVSEDSHFPIQNLPYGVFKPTLNDQARIGVAIGDFVCDLSVLADLKLFDGKLKDTKVFHQENLNSFMSLGKELWSEARKTIQNLLSSETSTIRDNKEYREKIFHSISSVTMLLPARIGDYTDFYASKEHATNVGIMFRGKENALMPNWVHLPVGYHGRSSSIVVSGTPLKRPWGQTKSDEPDSLPTFNPCRLLDFELEMGALIGGESTKLGEPISIESAKDHIFGLVLLNDWSARDIQKWEYVPLGPFLAKNFGSTISPWVVTMEALQPFATKPPTQDPQPMKYLQEQGNTTFDIELSVSIKSPKMSKPHKVSTSNLKYMYWTLTQQLAHHTVNGCNMNAGDLLGTGTISGPTEDSYGSMLELSWKGSKVVSLGTETNEERKFIQDGDSVILSGLCKGNGYQIGFGNCEGTILPADKRQ", "length": 427 }, "evidence": [ { "id": "A0A5G2QPJ7", "url": "https://omabrowser.org/oma/group/A0A5G2QPJ7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8RW90-1", "protein_name": "Fumarylacetoacetase", "gene_name": "FAH", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MALLKSFIDVGSDSHFPIQNLPYGVFKPESNSTPRPAVAIGDLVLDLSAISEAGLFDGLILKDADCFLQPNLNKFLAMGRPAWKEARSTLQRILSSNEPILRDNDVLRRKSFHQMSKVEMIVPMVIGDYTDFFASMHHAKNCGLMFRGPENAINPNWFRLPIAYHGRASSIVISGTDIIRPRGQGHPQGNSEPYFGPSKKLDFELEMAAVVGPGNELGKPIDVNNAADHIFGLLLMNDWSARDIQAWEYVPLGPFLGKSFGTTISPWIVTLDALEPFGCQAPKQDPPPLPYLAEKESVNYDISLEVQLKPSGRDDSCVITKSNFQNLYWTITQQLAHHTVNGCNLRPGDLLGTGTISGPEPDSYGCLLELTWNGQKPLSLNGTTQTFLEDGDQVTFSGVCKGDGYNVGFGTCTGKIVPSPP", "length": 421 }, "evidence": [ { "id": "A0A5G2QPJ7", "url": "https://omabrowser.org/oma/group/A0A5G2QPJ7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VZI8-1", "protein_name": "Fumarylacetoacetase", "gene_name": "Faa", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSQSFVPVPENSDFPLENLPYAVFSTENNKVHRICVAIGEHVLDLKAVSQLFPFQVQKSLQAETLNELMGLDFEAWDVVRSQTQKLLTKGSELDHNVDLKAVSIVPQSEIKLHLPAQIGDYTDFYSSIHHATNVGIMFRGPDNALMPNWRHLPVGYHGRASSVVVSGTPIRRPLGQTFPDGAEKPVFGACKLLDFELEMAFFIGGKGNQLGEPIRVDEAWKNVFGFTLMNDWSARDIQKWEYVPLGPFTAKNLGTTISPWVVPTAALKPFVLDNFPQEPEVLPYLRQNIPFNFDINLEVSLKPADQNEALISKSNFKHLYWTPLQQIAHHTVTGCNLRPGDLMASGTISGETPDSYGSLLELCWKGTKTLELPGGKTRKFLQDFDEVIIRGHCEKNGLRIGFGECVGQVLPAHPVPQ", "length": 417 }, "evidence": [ { "id": "A0A5G2QPJ7", "url": "https://omabrowser.org/oma/group/A0A5G2QPJ7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QPJ7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPJ7" } ], "pmid": "" }, { "name": "fumarylacetoacetase activity", "id": "GO:0004334", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004334", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QPJ7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPJ7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "L-phenylalanine catabolic process", "id": "GO:0006559", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006559", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QPJ7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPJ7" } ], "pmid": "" }, { "name": "L-tyrosine catabolic process", "id": "GO:0006572", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006572", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QPJ7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPJ7" } ], "pmid": "" }, { "name": "homogentisate catabolic process", "id": "GO:1902000", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902000", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QPJ7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPJ7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 363, "end_pos": 365, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "10244", "name": "", "equation": "4-fumarylacetoacetate + H2O = acetoacetate + fumarate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "10244", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/10244" } ] }, { "id": "R-SSC-71181", "name": "FAH cleaves 4FAA", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [ "R-ALL-31175" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-71181", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-71181" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-31175", "participant_name": "4FAA [cytosol]", "crossref": [ { "id": "18034", "database": "ChEBI", "url": "" }, { "id": "ZINC000030320946", "database": "ZINC", "url": "" }, { "id": "C01061", "database": "COMPOUND", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2QPJ7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 484, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2QPJ7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2QPJ7" } ], 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"mass": { "chemical_mass": 59685.0, "monoisotopic_mass": 59685.0 }, "refseq": { "ac": "XP_020949670", "name": "pyruvate dehydrogenase [acetyl-transferring]-phosphatase 2, mitochondrial", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949670" }, "gene_names": [ { "name": "PDP2", "type": "recommended", "evidence": [ { "id": "A0A287B2X3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B2X3" } ] }, { "name": "PDP2", "type": "synonym", "evidence": [ { "id": "XP_020949670", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949670" } ] } ], "protein_names": [ { "name": "[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial", "type": "recommended", "evidence": [ { "id": "A0A287B2X3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B2X3/entry#names_and_taxonomy" } ] }, { "name": "3.1.3.43", "type": "synonym", "evidence": [ { "id": "A0A287B2X3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B2X3/entry#names_and_taxonomy" } ] }, { "name": "Pyruvate dehydrogenase phosphatase catalytic subunit 2", "type": "synonym", "evidence": [ { "id": "A0A287B2X3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B2X3/entry#names_and_taxonomy" } ] }, { "name": "pyruvate dehydrogenase [acetyl-transferring]-phosphatase 2, mitochondrial", "type": "synonym", "evidence": [ { "id": "XP_020949670", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949670" } ] } ], "function": [ { "annotation": "Mitochondrial enzyme that catalyzes the dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex (PDC), thereby stimulating the conversion of pyruvate into acetyl-CoA. Acts as a crucial regulator of T cell metabolism and function, with a particular focus on T-helper Th17.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2X3", "url": "https://www.uniprot.org/uniprotkb/A0A287B2X3#function" }, { "database": "UniProtKB", "id": "ARBA00054115", "url": "https://www.uniprot.org/uniprotkb/ARBA00054115#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B2X3", "url": "https://www.uniprot.org/uniprotkb/A0A287B2X3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PDP2", "url": "https://www.uniprot.org/uniprotkb/A0A287B2X3", "locus": { "chromosome": "6", "start_pos": 27575455, "end_pos": 27565450, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000036067", "url": "https://www.ensembl.org/id/ENSSSCG00000036067" } ] } } ], "crossref": [ { "id": "ENSSSCG00000036067", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000036067", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00143", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00143", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100623511", "url": "https://www.ncbi.nlm.nih.gov/gene/100623511", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000222", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000222", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001932", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001932", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015655", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015655", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036457", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036457", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100623511", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623511", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DHNAWNP", "url": "https://omabrowser.org/oma/group/DHNAWNP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287B2X3", "url": "https://www.orthodb.org/?gene=A0A287B2X3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13832", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13832", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13832:SF343", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13832:SF343", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00481", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00481", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-204174", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-204174", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020949670", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949670", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "12669", "url": "https://www.rhea-db.org/rhea/12669", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287B2X3", "url": "https://www.uniprot.org/uniprotkb/A0A287B2X3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B2X3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B2X3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSTVSYWILSSARNGIATLQGGQRLYSRCASNRIKSKWRLFARGPATLKNNAPCDDGLALRKAYRHTSTEEEDFHLQLSPEQVNEVLRAGESAHKILDLVSRVPNSVLRFESNQLAANSPVEDRRGVAACLQTNGLMFGVFDGHGGHACAQAVSERLFYYVAVSLMSQQTLEQMEGAMESMKPLLPILQWLKHPGDSIYKDITSLHLDHLRVYWQELLDLHMEMGLNTEEALTYSFQRLDSDISLEIQAPLEDEMTRNLSLQVAFSGATACIAHVDGIHLHVANAGDCRAILGVQEDNGMWSCLPLTRDHNAWNPSELSRLKREHPESEDRTVILDNRLLGVLMPCRAFGDVQLKWSKELQQSVLERGFDTEALNIYQFTPPNYYTPPYLTAKPEVTYHRLRPQDKFLVLASDGLWDVLGNEDVVRLVVEHLAEGGRHKPDLAQRPGNLGLMQSLLLQRKAQGLQAADQNAATRLIRYAIGSNEYGEMEPERLSTMLTLPEDLARMYRDDITVTVVYFNSDSIDASYKGS", "length": 531, "header": "tr|A0A287B2X3-1|A0A287B2X3_PIG Isoform 1 of [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial OS=Sus scrofa OX=9823 GN=PDP2 PE=3 SV=1 CANONICAL=A0A287B2X3-1" }, "isoforms": [ { "isoform_ac": "A0A287B2X3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B2X3/entry", "sequence": { "sequence": "MSSTVSYWILSSARNGIATLQGGQRLYSRCASNRIKSKWRLFARGPATLKNNAPCDDGLALRKAYRHTSTEEEDFHLQLSPEQVNEVLRAGESAHKILDLVSRVPNSVLRFESNQLAANSPVEDRRGVAACLQTNGLMFGVFDGHGGHACAQAVSERLFYYVAVSLMSQQTLEQMEGAMESMKPLLPILQWLKHPGDSIYKDITSLHLDHLRVYWQELLDLHMEMGLNTEEALTYSFQRLDSDISLEIQAPLEDEMTRNLSLQVAFSGATACIAHVDGIHLHVANAGDCRAILGVQEDNGMWSCLPLTRDHNAWNPSELSRLKREHPESEDRTVILDNRLLGVLMPCRAFGDVQLKWSKELQQSVLERGFDTEALNIYQFTPPNYYTPPYLTAKPEVTYHRLRPQDKFLVLASDGLWDVLGNEDVVRLVVEHLAEGGRHKPDLAQRPGNLGLMQSLLLQRKAQGLQAADQNAATRLIRYAIGSNEYGEMEPERLSTMLTLPEDLARMYRDDITVTVVYFNSDSIDASYKGS", "length": 531, "header": "tr|A0A287B2X3-1|A0A287B2X3_PIG Isoform 1 of [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial OS=Sus scrofa OX=9823 GN=PDP2 PE=3 SV=1 CANONICAL=A0A287B2X3-1" }, "locus": { "chromosome": "6", "start_pos": 27570467, "end_pos": 27568875, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075077.2", "url": "https://www.ensembl.org/id/ENSSSCT00000075077.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066909.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066909.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2X3", "url": "https://www.uniprot.org/uniprotkb/A0A287B2X3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100623511", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623511", "resource": "KEGG Pathway" }, { "id": "R-SSC-204174", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-204174", "resource": "Reactome", "description": "Regulation of pyruvate dehydrogenase (PDH) complex" } ], "orthologs": [ { "uniprot_canonical_ac": "F1NW03-1", "protein_name": "Pyruvate dehydrogenase phosphatase catalytic subunit 2", "gene_name": "PDP2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MMSRTVSSWILGSARNSFVLQRRGRLYSICVPNRHKIKWKLVFSKTLLYPAGTCSLDNTFSLRKAFRHTSTEEEEFSFQLSPSQINDILRAGELSHKILDSSCKSANSVLKFESNQLASNTPIEDRRSAATCLQTRGMMFGVFDGHAGSACAQAVSERLLHYIAVSLMSRQTLEEMELAVECMKPVIPILQLHKHPNDVAYREMTSQYFESLRVYWQHLLDLDIEPGFSLEEAMISAFKRLDSDISLEVQAPQENELVRNTALQVAFSGATACVAHIDGVHLHVANAGDCRAILGVHEEDGTWSTLPLTRDHNAYDESEIRRLKREHPRSEEKTLFVNDRLLGILMPSRAFGDVQLKWSKELQHSVLENSCDVGALNIYHYVPPNYHTPPYLTAEPEVTYHKLRGKDKFLIIASDGLWEMLSNEEVVKLVAGHLTELNVQKPQLAFEKPVNLGYLHNLLLQRKNRGITSLDQNIATHLIRHAIGNNEYGEVDQEKLAAMLTLPEDLARMYRDDITITVVYFNSEAIENYYRNNE", "length": 534 }, "evidence": [ { "id": "A0A287B2X3", "url": "https://omabrowser.org/oma/group/A0A287B2X3/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3N1T9-1", "protein_name": "[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial", "gene_name": "PDP2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSSTVSYWILSSARKTIATLQGGQRLYSRYASNRSKSKWRLCPQGQAILKDSATACGGIALQKAYRHTSTEEEDFHLQLSPEQVNEVLRAGESAHKILDLVSRAPDSVLRFESNQLAANSPVEDRGGIAACLQTNGLLFGIFDGHGGHACAQAVSERLFYYVAVSLMSQQTLEQMEEAMESMKPLLPILQWLKHPGDSIYKDVTSVHLDHLRVYWQELLNLHMEMGLSTEEALMYSFQRLDSDISLEIQAPLEDEMTRNLSLQVAFSGATACLAHVDGVHLHVANAGDCRAILGVQEDNGMWSCLPLTQDHNAWNPAELSRLKREHPESEDRTVIMENRLLGVLMPCRAFGDVQLKWSKELQRSVLERGFDTEALNIYQFTPPHYYTPPYLTARPEVTYHRLRPQDKFLVLASDGLWDVLGNEDVVRLVVEHLAEEGQHKPDLAQRPTNLGLMQSLLQQRKAQGLHAADQNAATRLIRYAIGNNEYGEMEPERLSAMLTLPEDLARMYRDDITVTVVYFNSDSIGASSKGS", "length": 531 }, "evidence": [ { "id": "A0A287B2X3", "url": "https://omabrowser.org/oma/group/A0A287B2X3/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "O88484-1", "protein_name": "[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial", "gene_name": "Pdp2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTASYRIFNFARNRIAVLRGGRRLYSRAATSRNQVKWRLFSPASLAVNDSSPHGGFALRKAYRHTSTEEEDFHLQLSPEQVSDLLRAGESSHKVLDFNSGVPNSVLRFESNQLAANSPVEDRQGVASCVQTRGTMFGIFDGHGGHACAQAVSERLFYYMAVSLMSHKTLEQMEEAMENMKPLLPILQWLKHPGDSIYKDITSVHLDHLRVYWQELLDLHMETGLSTEEALMYSFQRLDSDISLEIQAPLEDEVTKNLSLQVAFSGATACMAHVDGVHLHIANAGDCRAILGVQGDNGAWSCLPLTCDHNAWNEAELSRLKREHPESEDRTLIIDDRLLGVLLPCRAFGDVQLKWSKELQRNVLERGFDTEALNIYQFTPPHYHTPPYLTAKPEVTYHRLRPQDKFLVLASDGLWDMLDNEDVVRLVVGHLSKVGHQKPALDQRPANLGHMQSLLLQRKASGLHAADQNAATHLIRHAIGSNEYGEMEPERLAAMLTLPEDVARMYRDDITVMVVFFNSESIDTYFKEG", "length": 530 }, "evidence": [ { "id": "A0A287B2X3", "url": "https://omabrowser.org/oma/group/A0A287B2X3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q12511-1", "protein_name": "[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial", "gene_name": "PTC5", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSPLTRTVAIKKTVKVLSKCQSGREYTQKFLQRAYSTSHANSTYYSRTKLFISSHSKALNIALLSGSLLLTYSYYSPKKILSLDTINGIKDYSTNTSGNINMPSPNPKGTETQKSQRSQNDQSVLILNDSKIEAKLHDREESHFVNRGTGIFRYDVAQLPSNHPIEDDHVEQIITIPIESEDGKSIEKDLYFFGIFDGHGGPFTSEKLSKDLVRYVAYQLGQVYDQNKTVFHSDPNQLIDSAISKGFLKLDNDLVIESFRKLFQDPNNTNIANTLPAISGSCALLSLYNSTNSILKVAVTGDSRALICGLDNEGNWTVKSLSTDQTGDNLDEVRRIRKEHPGEPNVIRNGRILGSLQPSRAFGDYRYKIKEVDGKPLSDLPEVAKLYFRREPRDFKTPPYVTAEPVITSAKIGENTKFMVMGSDGLFELLTNEEIASLVIRWMDKNMNLAPVKAEPGKLPKVIDVSEDKEAQRPAFRYKDNNSSSPSGSNPEYLIEDKNVATHLIRNALSAGGRKEYVSALVSIPSPMSRRYRDDLTVTVAFFGDSGTPSIVSNATSIVMNPEATTKPKPRL", "length": 572 }, "evidence": [ { "id": "A0A287B2X3", "url": "https://omabrowser.org/oma/group/A0A287B2X3/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q504M2-1", "protein_name": "[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial", "gene_name": "Pdp2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSTVSYWIFNSARNRIALLRGGRRLYSRAATSRNLLKWRPFSPALASSALKCGSPPGGFALRKAYRHTSTEEEDFHLQLSPEQVSDLLRAGESSHKVLDFNNGVPNSVLRFESNQLAANSPVEDRQGVATCVQTNGMMFGIFDGHGGHACAQAVSERLFYYMAVSLMSHQTLEQMEEATENMKPLLPILRWLKHPGDSIYKDVTSVHLDHLRVYWQELLDLHMEMGLSIEEALMYSFQRLDSDISLEIQAPLEDEVTRNLSLQVAFSGATACMAHVNGVHLHVANAGDCRAILGVQEENGAWSCLPLTCDHNAWNEAELSRLKREHPESEDRTLIIDDRLLGVLMPCRAFGDVQLKWSKELQRNVLARGFDTEALNIYQFTPPHYYTPPYLTAKPEVTYHRLRRQDKFLVLASDGLWDMLGNEDVVRLVVGHLSKVGRHKPDLDQRPANLGLMQSLLLQRKASGLHAADQNTATHLIRHAIGSNEYGEMEPERLAAMLTLPEDVARMYRDDITVMVVFFNSDSIDTYCKEG", "length": 532 }, "evidence": [ { "id": "A0A287B2X3", "url": "https://omabrowser.org/oma/group/A0A287B2X3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9P2J9-1", "protein_name": "[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial", "gene_name": "PDP2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSSTVSYWILNSTRNSIATLQGGRRLYSRYVSNRNKLKWRLFSRVPPTLNSSPCGGFTLCKAYRHTSTEEDDFHLQLSPEQINEVLRAGETTHKILDLESRVPNSVLRFESNQLAANSPVEDRRGVASCLQTNGLMFGIFDGHGGHACAQAVSERLFYYVAVSLMSHQTLEHMEGAMESMKPLLPILHWLKHPGDSIYKDVTSVHLDHLRVYWQELLDLHMEMGLSIEEALMYSFQRLDSDISLEIQAPLEDEVTRNLSLQVAFSGATACMAHVDGIHLHVANAGDCRAILGVQEDNGMWSCLPLTRDHNAWNQAELSRLKREHPESEDRTIIMEDRLLGVLIPCRAFGDVQLKWSKELQRSILERGFNTEALNIYQFTPPHYYTPPYLTAEPEVTYHRLRPQDKFLVLASDGLWDMLSNEDVVRLVVGHLAEADWHKTDLAQRPANLGLMQSLLLQRKASGLHEADQNAATRLIRHAIGNNEYGEMEAERLAAMLTLPEDLARMYRDDITVTVVYFNSESIGAYYKGG", "length": 529 }, "evidence": [ { "id": "A0A287B2X3", "url": "https://omabrowser.org/oma/group/A0A287B2X3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "[pyruvate dehydrogenase (acetyl-transferring)]-phosphatase activity", "id": "GO:0004741", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004741", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2X3", "url": "https://www.uniprot.org/uniprotkb/A0A287B2X3" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2X3", "url": "https://www.uniprot.org/uniprotkb/A0A287B2X3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2X3", "url": "https://www.uniprot.org/uniprotkb/A0A287B2X3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "T-helper cell differentiation", "id": "GO:0042093", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042093", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2X3", "url": "https://www.uniprot.org/uniprotkb/A0A287B2X3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 259, "end_pos": 261, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "12669", "name": "", "equation": "O-phospho-L-seryl-[pyruvate dehydrogenase E1 alpha subunit] + H2O = L-seryl-[pyruvate dehydrogenase E1 alpha subunit] + phosphate", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "12669", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/12669" } ] }, { "id": "R-SSC-204169", "name": "PDP1,2 dephosphorylate p-lipo-PDH", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-204169", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-204169" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287B2X3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B2X3" }, { "id": "PS51746", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51746" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PPM-type phosphatase", "eco_id": "ECO_0000259", "start_pos": 108, "end_pos": 519, "start_aa": "Val", "end_aa": "Phe", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 259, "end_pos": 261 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { 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"type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2Y9", "url": "https://www.uniprot.org/uniprotkb/A0A287B2Y9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 22, "end_pos": 24, "annotation": "n_glycosylation_sequon" }, { "start_pos": 320, "end_pos": 322, "annotation": "n_glycosylation_sequon" }, { "start_pos": 376, "end_pos": 378, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287B2Y9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 443, 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"MLGKRKRVVLTIKDKLDIIKKLEEGISFKKLSVVYGIGESTVRDIKKNKERIINYANSSDPTSGVSKRKSMKSSTYEELDRVMIEWFNQQKMEGIPVSGTICAKQAKFFFDALGMEGDFNASSGWLTRFKQRHGIPKAAGKGTKLKGDETAAREFCGNFQEFVERENLQPEQIYGADQTGLFWKCLPSRTLAFETEQSASGYRSSRERIIIMCCANATGLHKLNLCVVGKAKKPRAFKGADLSNLPVTYFSQKSAWIEHSVFRQWFEKYFVPQVQKHLKSKGLLEKAVLLLDFPPAHPDEELLRSDDGRIIVKYLPPNVTSLIQPMSQGVLATVKRYYRAGLLQKYMDEGIDPRMFWKNLTVLDAIYEVSRAWNMVKSSTITKAWKKLFPGSEESSGMNIDEGAILAANLATVLQNTEDCEHVDLETIDQWFDSRSNDSSCQVLTDSEGAEDPAKPAEHKPSSKTRRADLNPEKHISHKAALEWTENLLDYLEQQDDMLLSDKLVLRRLRTIIRRKQKIQNNKSR", "length": 525, "header": "tr|A0A287B330-1|A0A287B330_PIG Isoform 1 of Tigger transposable element derived 2 OS=Sus scrofa OX=9823 GN=TIGD2 PE=4 SV=1 CANONICAL=A0A287B330-1" }, "isoforms": [ { "isoform_ac": "A0A287B330-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B330/entry", "sequence": { "sequence": "MLGKRKRVVLTIKDKLDIIKKLEEGISFKKLSVVYGIGESTVRDIKKNKERIINYANSSDPTSGVSKRKSMKSSTYEELDRVMIEWFNQQKMEGIPVSGTICAKQAKFFFDALGMEGDFNASSGWLTRFKQRHGIPKAAGKGTKLKGDETAAREFCGNFQEFVERENLQPEQIYGADQTGLFWKCLPSRTLAFETEQSASGYRSSRERIIIMCCANATGLHKLNLCVVGKAKKPRAFKGADLSNLPVTYFSQKSAWIEHSVFRQWFEKYFVPQVQKHLKSKGLLEKAVLLLDFPPAHPDEELLRSDDGRIIVKYLPPNVTSLIQPMSQGVLATVKRYYRAGLLQKYMDEGIDPRMFWKNLTVLDAIYEVSRAWNMVKSSTITKAWKKLFPGSEESSGMNIDEGAILAANLATVLQNTEDCEHVDLETIDQWFDSRSNDSSCQVLTDSEGAEDPAKPAEHKPSSKTRRADLNPEKHISHKAALEWTENLLDYLEQQDDMLLSDKLVLRRLRTIIRRKQKIQNNKSR", "length": 525, "header": "tr|A0A287B330-1|A0A287B330_PIG Isoform 1 of Tigger transposable element derived 2 OS=Sus scrofa OX=9823 GN=TIGD2 PE=4 SV=1 CANONICAL=A0A287B330-1" }, "locus": { "chromosome": "8", "start_pos": 129996825, "end_pos": 129995251, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065094.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065094.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059062.1", "url": "https://www.ensembl.org/id/ENSSSCP00000059062.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B330", "url": "https://www.uniprot.org/uniprotkb/A0A287B330" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:102166704", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102166704", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "F1LVC4-1", "protein_name": "Tigger transposable element derived 2", "gene_name": "Tigd2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLGKRKRVVLTIKDKLDIIKKLEEGNSFKKLSVLYGIGESTVRDIKKNKERIINYANNSDPTSGVSKRKSMKSSTYEELDRVMIEWFNQQKTNGIPVSGTICAKQARFFFDALGMEGDFNASSGWLTRFKQRHGIPKAAGKGTKLKGDETAASEFCGNFQEFVKRENLLPEQIYGADQTGLFWKCLPTRTLAFDTDQSTCEYRTSRERIIIMCCANATGLHKLNLCVVGKAKRPRAFKGTDLSNLPVTYFSQKSAWIEPSVLKQWFEKCFVPQVQKHLKSKGLREKAVLLLDFPAAHPAEELLNSDDGRIIVKYLPPNVTSLIQPMSQGVLTTVKRYYRAGLIQKYMDEGNDPKLFWKNLTVLDAIYEASRAWNQIRSSTITRAWRKLFPGNEENPSVSIDEGAILAANLATVLQNTEDCEHVNIENIGQWFDSRSSGSNCQVLADLVGAADRAKAGEQKQPSRKTRKAELNPEKHISHRAALEWTENLLDYLEQQDDMLLSDKLVLRRLRTIIRRKQRIQTKSHL", "length": 526 }, "evidence": [ { "id": "A0A287B330", "url": "https://omabrowser.org/oma/group/A0A287B330/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3I6M8-1", "protein_name": "Tigger transposable element-derived protein 2", "gene_name": "Tigd2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLGKRKRVVLTIKDKLDIIKKLEEGNSFKKLSVVYGIGESTVRDIKKNKERIINYANSSDPTSGVSKRKSMKSSTYEELDRVMIEWFNQQKTDGIPVSGTLCAKQAKFFFDALGMEGDFNASSGWLTRFKQRHGIPKAAGKGTKLKGDETAASEFCGSFQEFVERENLLPEQIYGADQTGLFWKCLPSRTLALDSDQSTSEYRSSRERIIIMCCANATGLHKLNLCVVGKAKRPRSFKGTDLSNLPVSYFSQKSAWIEQSVFKQWFEKCFVPQVQKHLNSKGLREKAVLLIDFPAARPAEDLLSSDDGRIVVKYLPPNVASLIQPMSQGVLTTVKRYYRAGLIQKYMDGGNDPKMFWKNLTVLDAIYEASRAWNMIRSNTITRAWKKLFPGNEENSSVSIDEGAILAANLATVLQNTEDCEHVDIENIEPWLDSRSSVSNCQVLADTAGAEKQAVTAEQKPSRKTRKAELHPEKHISHKAALEWTENLLDYLEQQDDMLLSDKLVLRRLRTIIRRKQRIQSKNHL", "length": 525 }, "evidence": [ { "id": "A0A287B330", "url": "https://omabrowser.org/oma/group/A0A287B330/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3N133-1", "protein_name": "Tigger transposable element derived 2", "gene_name": "TIGD2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLGKRKRVVLTIKDKLDIIKKLEEGISFKKLSVVYGIGESTVRDIKKNKERIINYANSSDPTSGVSKRKSMKSSTYEELDRVMIEWFNQQKTDGIPVSGTICAKQAKFFFDALGMEGDFNASSGWLTRFKQRHGIPKAAGKGTKLKGDETAASEFCGNFQEFVERENLQPEQIYGADQTGLFWKCLPSRTLALETEQSSSGYRSSRERIIIMCCANATGLHKLNLCVVGKAKKPRAFKGADLSNLPVTYFSQKSAWIEHSVFRQWFEKYFVPQVQKHLKSKGLLEKAVLLLDFPPAHPNEELLSSDDGRIIVKYLPPNVTSLIQPMSQGVLATVKRYYRAGLLQKYMDEGTDPRMFWKNLTVLDAIYEVSRAWNMIKSSTITKAWKKLFPGTEENSGMNIDEGAILAANLATVLQNTEDCEHVDLENIDQWFDSRSNDSSCQVLTDSEGVEDQARPAETKPSSKTRKTELNPEKHISHKAALEWTENLLDYLEQQDDMLLSDKLVLRRLRTIIRRKQKIQNNKSH", "length": 525 }, "evidence": [ { "id": "A0A287B330", "url": "https://omabrowser.org/oma/group/A0A287B330/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q0VBL1-1", "protein_name": 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"id": "A0A287B330", "url": "https://www.uniprot.org/uniprotkb/A0A287B330" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A287B330", "url": "https://www.uniprot.org/uniprotkb/A0A287B330" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 120, "end_pos": 122, "annotation": "n_glycosylation_sequon" }, { "start_pos": 216, "end_pos": 218, "annotation": "n_glycosylation_sequon" }, { "start_pos": 318, "end_pos": 320, "annotation": "n_glycosylation_sequon" }, { "start_pos": 359, "end_pos": 361, "annotation": "n_glycosylation_sequon" }, { "start_pos": 437, "end_pos": 439, "annotation": "n_glycosylation_sequon" }, { "start_pos": 522, "end_pos": 524, "annotation": "n_glycosylation_sequon" }, { "start_pos": 57, "end_pos": 59, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": 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"IPR046906", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046906", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049097", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049097", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "VCRGHPA", "url": "https://omabrowser.org/oma/group/VCRGHPA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR16451", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16451", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16451:SF11", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16451:SF11", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF20266", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF20266", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21297", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21297", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287B3P8", "url": "https://www.uniprot.org/uniprotkb/A0A287B3P8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B3P8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B3P8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAEFSQNRGKRRDGEALGSAVDFLLANARLVLGVGGAAVLGIATLAVKRLIDRATSSQDEADAKGDATCLEESWKELSLLKATPCLQRRPPPAALSQSVPLRAPSPSAPEVPADADPQKAPQLSSPAPSLCLTFQEKLLAFERDYVTVPVAHVTLAKQLAGDIALELQAYLRNKFPELPFGALVPGGPLYDGLQAGATDPVRLLVPLALEPGLWSLVPGVDTVAQDPRCWAVRRTQLEFRPRGSSPWDRFLVGGYLSSRVLLELLRKALTASVNWPAIGSLLGCLIRPRVASEELLLEVQHERLELTVAVLLAVAGAPAGERLLLAWPLEGLAGNLWLQDLYSAEAARLRALDEGDAGTRRRLLLLLCGVCHRHPVLGRLGRSHLTQVVLRLGEEAADWAEEALGERFLQALESLIGSLERASLPCHFNHRVDLLGGLRDEDIDDLGCALFRGLQAPEQLLPPVLGEPLSLA", "length": 472, "header": "tr|A0A287B3P8-1|A0A287B3P8_PIG Isoform 1 of Mitochondrial dynamics protein MID49 OS=Sus scrofa OX=9823 GN=MIEF2 PE=3 SV=1 CANONICAL=A0A287B3P8-1" }, "isoforms": [ { "isoform_ac": "A0A287B3P8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B3P8/entry", "sequence": { "sequence": "MAEFSQNRGKRRDGEALGSAVDFLLANARLVLGVGGAAVLGIATLAVKRLIDRATSSQDEADAKGDATCLEESWKELSLLKATPCLQRRPPPAALSQSVPLRAPSPSAPEVPADADPQKAPQLSSPAPSLCLTFQEKLLAFERDYVTVPVAHVTLAKQLAGDIALELQAYLRNKFPELPFGALVPGGPLYDGLQAGATDPVRLLVPLALEPGLWSLVPGVDTVAQDPRCWAVRRTQLEFRPRGSSPWDRFLVGGYLSSRVLLELLRKALTASVNWPAIGSLLGCLIRPRVASEELLLEVQHERLELTVAVLLAVAGAPAGERLLLAWPLEGLAGNLWLQDLYSAEAARLRALDEGDAGTRRRLLLLLCGVCHRHPVLGRLGRSHLTQVVLRLGEEAADWAEEALGERFLQALESLIGSLERASLPCHFNHRVDLLGGLRDEDIDDLGCALFRGLQAPEQLLPPVLGEPLSLA", "length": 472, "header": "tr|A0A287B3P8-1|A0A287B3P8_PIG Isoform 1 of Mitochondrial dynamics protein MID49 OS=Sus scrofa OX=9823 GN=MIEF2 PE=3 SV=1 CANONICAL=A0A287B3P8-1" }, "locus": { "chromosome": "12", "start_pos": 60473457, "end_pos": 60471388, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047328.3", "url": "https://www.ensembl.org/id/ENSSSCT00000047328.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051104.1", "url": "https://www.ensembl.org/id/ENSSSCP00000051104.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B3P8", "url": "https://www.uniprot.org/uniprotkb/A0A287B3P8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A3L7GP41-1", "protein_name": "Mitochondrial dynamics protein MID49", "gene_name": "Mief2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAEFSQKQRKQRGSEGLGSVVDFLLANARLVLGVGGAAVLGIATLAVKRLIDRATSPRDEDDTKGDSWKELSLLRATSHQHPQPPPAALSQPISLVSPSPSAPVEPIPAQSQTTQMPQLSSRAPLCLTFQEKLLVFERSHVIIPEAHVTLVKQLAGDIALELQAYLRSKFPELPFGALVPGGPLYDGLQAGVAEHVRLLAPLELEPDLWSLVPGMDTVAKEPRCWAVRRTQLEFHPRGRSPWDRFLVGGYLSSRVLLELIRKALAASVNWPAIGSLLGCLIRPNVASEELLLEVQHESLEFTLAVLMVVPGASTDDRLLLAWPLEGLAANLWLQDLYPVEAACLRALDDQDAGTRRRLLLLLCGVCRGHPALVRLGWSHLTQVVLHLGKEEVAWTEEALGDRFLQALEFLVGSLEQASLPCHFNPSVNLLGSFREEEIDDIGYILYSGLQVPESLL", "length": 456 }, "evidence": [ { "id": "A0A287B3P8", "url": "https://omabrowser.org/oma/group/A0A287B3P8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8I6GLF2-1", "protein_name": "Mitochondrial dynamics protein MID49", "gene_name": "Mief2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEFSQKQRKQHGGEGLGSVVDFLLANARLVLGVGGAAVLGIATLAVKRLIDRATNPRDEDDTKGDSWKELSLLRATSHPKPQPSPAAFSQPKSPVSPSPSAPVGPTPTHSQTTPKLSSVAPLCLTFQEKLLAFERNHVIVPEAHVTLVKQLAGDIGLELQAYLRSKFSELPFGVLVPSGPLYEGLQAGTAEHVRLLVPLELEPGLWSLVPGMDTVAREPRCWAVRRTQLEFHPRGCSPWDRFLVGGYLSPRVLLELLRKALSASVNWPAIGSLLGCLIWPNVASDELLLKVHHECLEFTLAVLMVVPGASTDDRLLLAWPLEGLASNLWLQDLYPVETARLRALDDQDAGTRRRLLLLLCGVCRGHPVLVRLGWSHLTQVILRLGEEEVAWTEEALGERFLQALEFLVGSLEQASLPCHFNPSVNLLGSFREEEIDDIGYVLYSGLQVPESLF", "length": 454 }, "evidence": [ { "id": "A0A287B3P8", "url": "https://omabrowser.org/oma/group/A0A287B3P8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5NCS9-1", "protein_name": "Mitochondrial dynamics protein MID49", "gene_name": 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H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B3R4", "url": "https://www.uniprot.org/uniprotkb/A0A287B3R4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100621101", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621101", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "F1M1R7-1", "protein_name": "Zinc finger protein 771", "gene_name": "Zfp771", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"MIWYVATLIASVISARGLAAQGAHGLREEPEFVTARAGEGVVLRCDVVHPVTGQPPPYVVEWFKFGVPIPIFIKFGYYPPHVDPEYAGRASLHDKASLRLEQVRAEDQGWYECKVLLLDQQYDTFHNGSWVHLTIHAPPTFTETPPQYIEAKEGGSVTMTCTAFGNPKPIVTWLKEGTLLGASGKYQVSDGSLTVTSVSREDRGAYTCRAYSIQGEAVHTTHLLVQGPPFIVSPPENITVNISQDALLTCRAEAYPGNLTYTWYWQDENVYFQNDLKLRVRILIDGTLIIFRVKPEDAGKYTCVPSNSLGRSPSASAYLTVQYPARVLNMPPVIYVPVGIHGYIRCPVDAEPPATVVKWNKDGRPLQVEKNLGWTLMEDGSIRIEEATEEALGTYTCVPYNTLGTMGQSAPARLVLKDPPYFTVLPGWEYRQEAGRELLIPCAAAGDPFPVITWRKVGKPSRSKHNALPSGSLQFRALSKEDHGEWECIATNVVTSITASTHLTVIGTSPHAPGSVRVQVSMTTANVSWEPGYDGGFEQTFSVWMKRAQFGPHDWLSLPVPPGPNWLLVDALEPETAYQFSVLAQNKLGTSAFSEVVTVNTLAFPVTTPEPLVLVTPPRCLTANRTQQGVLLSWLPPANHSFPIDRYIMEFRIGERWEMLDDAIPGTDGDFFAKDLSQDTWYEFRVLAVMQDLVSEPSNIAGVSSTDIFPQPDLTDDGLARPVLAGIVATICFLAAAILFSTLAACFVNKQRKRKLKRKKDPPLSITHCRKSLESPLSSGKVSPESIRTLRAPSESSDDQGQPAAKRMLSPMREKELSLYKKTKRAISSKKYSVAKAEAEAEATTPIELISRGPDGRFVMDPSEMEPSAKTRRIEGFPFAEETDMYPEFRQSDEENEDPLVPTSVAALKSQLTPLSSSQESYLPPPAYSPRFQPRGLEGPGGLEGRLQATGQTRPPAPRPFHHSQYYGYLSSSSPGEVEPPPFYMPEVGSPLSSVMSSPPLHAEGPFGHPTIPEENGENASNSTLPLTQTPTGGRSPEPWGRPEFPFGGLETPAMMFPHQLHPCDVAESLQPAAGLPRGLPPASLQVPAAYPGILSLEAPKGWAGKSPGRGPAPVPTTAKWQDRPVQPLVSQGQLRHTSQGMGIPVLPYPEPAEPGAHGGPSTLGLDTRWYEPQPRPRPSPRQARRAEPSLHQVVLQPSRLSPLTQSPLSSRTGSPELAARARPRPGLLQQAEMSEITLQPPAAVSFSRKSTPSTGSPSQSSRSGSPSYRPTMGFTTLATGYPSPPPAAAPPGPADNLDVFGQTPSPRRMGEELLRPEPPPPPLPTSGTHPPAPGNAAVPERLEALKYQRIKKPKKSSKGSSKSKKRSDGSASQAQHLPNSQVLWPDEAVCLRRKKRHSRPDPFARLSDLCHRQLPEDQTAILSSVEHDDPGHATLL", "length": 1437, "header": "tr|A0A287B4E2-1|A0A287B4E2_PIG Isoform 1 of Protein turtle homolog B OS=Sus scrofa OX=9823 GN=IGSF9B PE=3 SV=2 CANONICAL=A0A287B4E2-1" }, "isoforms": [ { "isoform_ac": "A0A287B4E2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B4E2/entry", "sequence": { "sequence": "MIWYVATLIASVISARGLAAQGAHGLREEPEFVTARAGEGVVLRCDVVHPVTGQPPPYVVEWFKFGVPIPIFIKFGYYPPHVDPEYAGRASLHDKASLRLEQVRAEDQGWYECKVLLLDQQYDTFHNGSWVHLTIHAPPTFTETPPQYIEAKEGGSVTMTCTAFGNPKPIVTWLKEGTLLGASGKYQVSDGSLTVTSVSREDRGAYTCRAYSIQGEAVHTTHLLVQGPPFIVSPPENITVNISQDALLTCRAEAYPGNLTYTWYWQDENVYFQNDLKLRVRILIDGTLIIFRVKPEDAGKYTCVPSNSLGRSPSASAYLTVQYPARVLNMPPVIYVPVGIHGYIRCPVDAEPPATVVKWNKDGRPLQVEKNLGWTLMEDGSIRIEEATEEALGTYTCVPYNTLGTMGQSAPARLVLKDPPYFTVLPGWEYRQEAGRELLIPCAAAGDPFPVITWRKVGKPSRSKHNALPSGSLQFRALSKEDHGEWECIATNVVTSITASTHLTVIGTSPHAPGSVRVQVSMTTANVSWEPGYDGGFEQTFSVWMKRAQFGPHDWLSLPVPPGPNWLLVDALEPETAYQFSVLAQNKLGTSAFSEVVTVNTLAFPVTTPEPLVLVTPPRCLTANRTQQGVLLSWLPPANHSFPIDRYIMEFRIGERWEMLDDAIPGTDGDFFAKDLSQDTWYEFRVLAVMQDLVSEPSNIAGVSSTDIFPQPDLTDDGLARPVLAGIVATICFLAAAILFSTLAACFVNKQRKRKLKRKKDPPLSITHCRKSLESPLSSGKVSPESIRTLRAPSESSDDQGQPAAKRMLSPMREKELSLYKKTKRAISSKKYSVAKAEAEAEATTPIELISRGPDGRFVMDPSEMEPSAKTRRIEGFPFAEETDMYPEFRQSDEENEDPLVPTSVAALKSQLTPLSSSQESYLPPPAYSPRFQPRGLEGPGGLEGRLQATGQTRPPAPRPFHHSQYYGYLSSSSPGEVEPPPFYMPEVGSPLSSVMSSPPLHAEGPFGHPTIPEENGENASNSTLPLTQTPTGGRSPEPWGRPEFPFGGLETPAMMFPHQLHPCDVAESLQPAAGLPRGLPPASLQVPAAYPGILSLEAPKGWAGKSPGRGPAPVPTTAKWQDRPVQPLVSQGQLRHTSQGMGIPVLPYPEPAEPGAHGGPSTLGLDTRWYEPQPRPRPSPRQARRAEPSLHQVVLQPSRLSPLTQSPLSSRTGSPELAARARPRPGLLQQAEMSEITLQPPAAVSFSRKSTPSTGSPSQSSRSGSPSYRPTMGFTTLATGYPSPPPAAAPPGPADNLDVFGQTPSPRRMGEELLRPEPPPPPLPTSGTHPPAPGNAAVPERLEALKYQRIKKPKKSSKGSSKSKKRSDGSASQAQHLPNSQVLWPDEAVCLRRKKRHSRPDPFARLSDLCHRQLPEDQTAILSSVEHDDPGHATLL", "length": 1437, "header": "tr|A0A287B4E2-1|A0A287B4E2_PIG Isoform 1 of Protein turtle homolog B OS=Sus scrofa OX=9823 GN=IGSF9B PE=3 SV=2 CANONICAL=A0A287B4E2-1" }, "locus": { "chromosome": "9", "start_pos": 60521266, "end_pos": 60479033, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044600.3", "url": "https://www.ensembl.org/id/ENSSSCT00000044600.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050974.2", "url": "https://www.ensembl.org/id/ENSSSCP00000050974.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1326, "start_aa": "Thr", "end_pos": 1326, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1326", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4E2", "url": "https://www.uniprot.org/uniprotkb/A0A287B4E2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "GABA-ergic synapse", "id": "GO:0098982", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098982", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4E2", "url": "https://www.uniprot.org/uniprotkb/A0A287B4E2" } ], "pmid": "" }, { "name": "postsynaptic density", "id": "GO:0014069", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0014069", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4E2", "url": "https://www.uniprot.org/uniprotkb/A0A287B4E2" } ], "pmid": "" }, { "name": "postsynaptic membrane", "id": "GO:0045211", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045211", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4E2", "url": "https://www.uniprot.org/uniprotkb/A0A287B4E2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "cell adhesion", "id": "GO:0007155", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007155", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4E2", "url": "https://www.uniprot.org/uniprotkb/A0A287B4E2" } ], "pmid": "" }, { "name": "nervous system development", "id": "GO:0007399", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007399", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4E2", "url": "https://www.uniprot.org/uniprotkb/A0A287B4E2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1019, "end_pos": 1021, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1022, "end_pos": 1024, "annotation": "n_glycosylation_sequon" }, { "start_pos": 127, "end_pos": 129, "annotation": "n_glycosylation_sequon" }, { "start_pos": 237, "end_pos": 239, "annotation": "n_glycosylation_sequon" }, { "start_pos": 241, "end_pos": 243, "annotation": "n_glycosylation_sequon" }, { "start_pos": 258, "end_pos": 260, "annotation": "n_glycosylation_sequon" }, { "start_pos": 526, "end_pos": 528, "annotation": "n_glycosylation_sequon" }, { "start_pos": 624, "end_pos": 626, "annotation": "n_glycosylation_sequon" }, { "start_pos": 639, "end_pos": 641, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287B4E2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B4E2" }, { "id": "PS50853", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50853" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Fibronectin type-III", "eco_id": "ECO_0000259", "start_pos": 512, "end_pos": 604, "start_aa": "Ala", "end_aa": "Phe", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A287B4E2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B4E2" }, { "id": "PS50835", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50835" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ig-like", "eco_id": "ECO_0000259", "start_pos": 30, "end_pos": 115, "start_aa": "Pro", "end_aa": "Val", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 1326 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1019, "end_pos": 1021 }, { "start_pos": 1022, "end_pos": 1024 }, { "start_pos": 127, "end_pos": 129 }, { "start_pos": 237, "end_pos": 239 }, { "start_pos": 241, "end_pos": 243 }, { "start_pos": 258, "end_pos": 260 }, { "start_pos": 526, "end_pos": 528 }, { "start_pos": 624, "end_pos": 626 }, { "start_pos": 639, "end_pos": 641 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", 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"AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000032352", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000032352", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR14003", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14003", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14003:SF23", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14003:SF23", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-212436", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9843940", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9843940", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287B4F4", "url": "https://www.uniprot.org/uniprotkb/A0A287B4F4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B4F4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B4F4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"url": "https://www.ensembl.org/id/ENSSSCP00000051061.1" } ] } }, { "isoform_ac": "A0A287B8Q4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B8Q4/entry", "sequence": { "sequence": "MLPVSFSNLFIIPNPKACHSHIIVVIPMPAGYGVMGDDGSMDYSVHEAWNEATNVYLVVILVSFGLFMYAKRNKRKIMRIFSVPPTAETLSEPNFYDTISKIRLRQQLEMYSISRKYDYQQPQNQADSVQLSLE", "length": 134, "header": "tr|A0A287B8Q4-1|A0A287B8Q4_PIG Computationally mapped isoform of Small integral membrane protein 19 OS=Sus scrofa OX=9823 GN=SMIM19 PE=3 SV=2 CANONICAL=A0A287B4P4-1" }, "locus": { "chromosome": "17", "start_pos": 11565805, "end_pos": 11553134, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047679.3", "url": "https://www.ensembl.org/id/ENSSSCT00000047679.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052704.2", "url": "https://www.ensembl.org/id/ENSSSCP00000052704.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": 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H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4P4", "url": "https://www.uniprot.org/uniprotkb/A0A287B4P4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152445", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152445", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A5D7B5-1", "protein_name": "Small integral membrane protein 19", "gene_name": "SMIM19", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPGGYGVMGDDGAMDYSVHEAWNEATNVYLVVILVSFGLFMYAKRNKRKIMRIFSLPPPAETLSEPNFYDTISKIRLRQQLEMYSISRKYDYQQPQSQADSVQLSLE", "length": 107 }, "evidence": [ { "id": "A0A287B4P4", "url": 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"https://omabrowser.org/oma/group/A0A287B4P4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96E16-1", "protein_name": "Small integral membrane protein 19", "gene_name": "SMIM19", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAGGYGVMGDDGSIDYTVHEAWNEATNVYLIVILVSFGLFMYAKRNKRRIMRIFSVPPTEETLSEPNFYDTISKIRLRQQLEMYSISRKYDYQQPQNQADSVQLSLE", "length": 107 }, "evidence": [ { "id": "A0A287B4P4", "url": "https://omabrowser.org/oma/group/A0A287B4P4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4P4", "url": "https://www.uniprot.org/uniprotkb/A0A287B4P4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], 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"count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"A0A287BFK9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BFK9/entry#names_and_taxonomy" } ] }, { "name": "Zyg-11 homolog B-like protein", "type": "synonym", "evidence": [ { "id": "A0A287BFK9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BFK9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BFK9", "url": "https://www.uniprot.org/uniprotkb/A0A287BFK9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZER1", "url": "https://www.uniprot.org/uniprotkb/A0A287BFK9", "locus": { "chromosome": "1", "start_pos": 269090159, "end_pos": 269108256, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005659", "url": "https://www.ensembl.org/id/ENSSSCG00000005659" } ] } } ], "crossref": [ { "id": "ENSSSCG00000005659", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005659", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100514508", "url": "https://www.ncbi.nlm.nih.gov/gene/100514508", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000225", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000225", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011989", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011989", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051341", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051341", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055142", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055142", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056845", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056845", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100514508", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514508", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QIRRKHA", "url": "https://omabrowser.org/oma/group/QIRRKHA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1RR66", "url": "https://www.orthodb.org/?gene=F1RR66", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12904", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12904", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12904:SF23", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12904:SF23", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF22964", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22964", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25013", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25013", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287BFK9", "url": "https://www.uniprot.org/uniprotkb/A0A287BFK9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BFK9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BFK9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJK7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJK7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJK7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJK7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RR66", "url": "https://www.uniprot.org/uniprotkb/F1RR66", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RR66-1", "url": "https://www.uniprot.org/uniprotkb/F1RR66-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASDTPESLMALCTDFCLRNLDGTLGYLLDKETLRLHPDIFLPSEICDRLVNEYVELVNAACNFEPHESFFSLFSDPRSTRLTRIHLREDLVQDQDLEAIRKQDLVELYLTNCEKLSAKSLQTLRSFSHTLVSLSLFGCANIFYEEENPGGCEDECLVNPTCQVLVKDFTFEGFSRLRFLNLGRMIDGVPVESLLRPLHSLAALDLSGIQTSDAAFLTQWKDSLVSLVLYNMDLSDDHIRVIVQLHKLRHLDISRDRLSSYYKFKLTRKVLSLFVQKLGNLMSLDISGHMILENCSISKMDEEAGQTSIEPSKSSIMPFRALKRPLQFLGLFETSLCRLTHIPAYKVSGDKNEEQVLNAIEAYTEHRPEITSRAINLLFDIARIERCNQLLRALKLVITALKCHKYDKNIQVTGSAALFYLTNSEYRSEQSVKLRRQVIQVVLNGMESYQEVTVQRNCCLTLCNFSIPEELEFQYRRVNELLLSILNPTRQDESIQRIAVHLCNALVCQVDNDHKEAVGKMGFVVTMLKLIQKKLLDKICDQVMEFSWSALWNITDETPDNCEMFLNFNGMKLFLDCLKEFPEKQELHRNMLGLLGNVAEVKELRPQLMTSQFISVFSNLLESKADGIEVSYNACGVLSHIMFDGPEAWGICEPQREEVEERMWAAIQSWDINSRRNINYRSFEPILRLLPQGISPVSQHWATWALYNLVSVYPDKYCPLLIKEGGMPLLRDVIKMATARQETKEMAR", "length": 748, "header": "tr|A0A287BFK9-1|A0A287BFK9_PIG Isoform 1 of Protein zer-1 homolog OS=Sus scrofa OX=9823 GN=ZER1 PE=1 SV=1 CANONICAL=A0A287BFK9-1" }, "isoforms": [ { "isoform_ac": "A0A287BFK9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BFK9/entry", "sequence": { "sequence": "MASDTPESLMALCTDFCLRNLDGTLGYLLDKETLRLHPDIFLPSEICDRLVNEYVELVNAACNFEPHESFFSLFSDPRSTRLTRIHLREDLVQDQDLEAIRKQDLVELYLTNCEKLSAKSLQTLRSFSHTLVSLSLFGCANIFYEEENPGGCEDECLVNPTCQVLVKDFTFEGFSRLRFLNLGRMIDGVPVESLLRPLHSLAALDLSGIQTSDAAFLTQWKDSLVSLVLYNMDLSDDHIRVIVQLHKLRHLDISRDRLSSYYKFKLTRKVLSLFVQKLGNLMSLDISGHMILENCSISKMDEEAGQTSIEPSKSSIMPFRALKRPLQFLGLFETSLCRLTHIPAYKVSGDKNEEQVLNAIEAYTEHRPEITSRAINLLFDIARIERCNQLLRALKLVITALKCHKYDKNIQVTGSAALFYLTNSEYRSEQSVKLRRQVIQVVLNGMESYQEVTVQRNCCLTLCNFSIPEELEFQYRRVNELLLSILNPTRQDESIQRIAVHLCNALVCQVDNDHKEAVGKMGFVVTMLKLIQKKLLDKICDQVMEFSWSALWNITDETPDNCEMFLNFNGMKLFLDCLKEFPEKQELHRNMLGLLGNVAEVKELRPQLMTSQFISVFSNLLESKADGIEVSYNACGVLSHIMFDGPEAWGICEPQREEVEERMWAAIQSWDINSRRNINYRSFEPILRLLPQGISPVSQHWATWALYNLVSVYPDKYCPLLIKEGGMPLLRDVIKMATARQETKEMAR", "length": 748, "header": "tr|A0A287BFK9-1|A0A287BFK9_PIG Isoform 1 of Protein zer-1 homolog OS=Sus scrofa OX=9823 GN=ZER1 PE=1 SV=1 CANONICAL=A0A287BFK9-1" }, "locus": { "chromosome": "1", "start_pos": 269108163, "end_pos": 269092620, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060995.3", "url": "https://www.ensembl.org/id/ENSSSCT00000060995.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054916.1", "url": "https://www.ensembl.org/id/ENSSSCP00000054916.1" } ] } }, { "isoform_ac": "A0A5G2QJK7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJK7/entry", "sequence": { "sequence": "MASDTPESLMALCTDFCLRNLDGTLGYLLDKETLRLHPDIFLPSEICDRLVNEYVELVNAACNFEPHESFFSLFSDPRSTRLTRIHLREDLVQDQDLEAIRKQDLVELYLTNCEKLSAKSLQTLRSFSHTLVSLSLFGCANIFYEEENPGGCEDECLVNPTCQVLVKDFTFEGFSRLRFLNLGRMIDGVPVESLLRPLHSLAALDLSGIQTSDAAFLTQWKDSLVSLVLYNMDLSDDHIRVIVQLHKLRHLDISRDRLSSYYKFKLTRKVLSLFVQKLGNLMSLDISGHMILENCSISKMDEEAGQTSIEPSKSSIMPFRALKRPLQFLGLFETSLCRLTHIPAYKVSGDKNEEQVLNAIEAYTEHRPEITSRAINLLFDIARIERCNQLLRALKLVITALKCHKYDKNIQVTGSAALFYLTNSEYRSEQSVKLRRQVIQVVLNGMESYQEVTVQRNCCLTLCNFSIPEELEFQYRRVNELLLSILNPTRQDESIQRIAVHLCNALVCQVDNDHKEAVGKMGFVVTMLKLIQKKLLDKICDQVMEFSWSALWNITDETPDNCEMFLNFNGMKLFLDCLKEFPEKQELHRNMLGLLGNVAEVKELRPQLMTSQFISVFSNLLESKADGIEVSYNACGVLSHIMFDGPEAWGICEPQREEVEERMWAAIQSWDINSRRNINYRSFEPILRLLPQGISPVSQHWATWALYNLVSVYPGELVSASAPRHTALRLPTAVGCQRHGWPLARPHRQPWPIWTSQAAFLLCPAST", "length": 767, "header": "tr|A0A5G2QJK7-1|A0A287BFK9_PIG Computationally mapped isoform of Protein zer-1 homolog OS=Sus scrofa OX=9823 GN=ZER1 PE=1 SV=1 CANONICAL=A0A287BFK9-1" }, "locus": { "chromosome": "1", "start_pos": 269108163, "end_pos": 269094465, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068478.2", "url": "https://www.ensembl.org/id/ENSSSCT00000068478.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064127.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064127.1" } ] } }, { "isoform_ac": "F1RR66-1", "url": "https://www.uniprot.org/uniprotkb/F1RR66/entry", "sequence": { "sequence": "MASDTPESLMALCTDFCLRNLDGTLGYLLDKETLRLHPDIFLPSEICDRLVNEYVELVNAACNFEPHESFFSLFSDPRSTRLTRIHLREDLVQDQDLEAIRKQDLVELYLTNCEKLSAKSLQTLRSFSHTLVSLSLFGCANIFYEEENPGGCEDECLVNPTCQVLVKDFTFEGFSRLRFLNLGRMIDGVPVESLLRPLHSLAALDLSGIQTSDAAFLTQWKDSLVSLVLYNMDLSDDHIRVIVQLHKLRHLDISRDRLSSYYKFKLTRKVLSLFVQKLGNLMSLDISGHMILENCSISKMDEEAGQTSIEPSKSSIMPFRALKRPLQFLGLFETSLCRLTHIPAYKVSGDKNEEQVLNAIEAYTEHRPEITSRAINLLFDIARIERCNQLLRALKLVITALKCHKYDKNIQVTGSAALFYLTNSEYRSEQSVKLRRQVIQVVLNGMESYQEVTVQRNCCLTLCNFSIPEELEFQYRRVNELLLSILNPTRQDESIQRIAVHLCNALVCQVDNDHKEAVGKMGFVVTMLKLIQKKLLDKICDQVMEFSWSALWNITDETPDNCEMFLNFNGMKLFLDCLKEFPEKQELHRNMLGLLGNVAEVKELRPQLMTSQFISVFSNLLESKADGIEVSYNACGVLSHIMFDGPEAWGICEPQREEVEERMWAAIQSWDINSRRNINYRSFEPILRLLPQGISPVSQHWATWALYNLVSVYPDKYCPLLIKEGGMPLLRDVIKMATARQETKEMARKVIEHCSNFKEENMDTSR", "length": 766, "header": "tr|F1RR66-1|A0A287BFK9_PIG Computationally mapped isoform of Protein zer-1 homolog OS=Sus scrofa OX=9823 GN=ZER1 PE=1 SV=2 CANONICAL=A0A287BFK9-1" }, "locus": { "chromosome": "1", "start_pos": 269108163, "end_pos": 269090336, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000006222.5", "url": "https://www.ensembl.org/id/ENSSSCT00000006222.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000006063.2", "url": "https://www.ensembl.org/id/ENSSSCP00000006063.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJK7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJK7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100514508", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514508", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0ABK0LLN4-1", "protein_name": "Protein zer-1 homolog", "gene_name": "Zer1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFSSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVRWVPGSESLFLVAHSSGNMYLYNVEHACGTTAPHYQLLKQGESFAVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFGDRRVIARGHGHKSWVSVVAFDPYTTSVEESDPLELSGSDEDFQDLLHFGRDRANSTQSRLSKRNSTESRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARTHTNVMNATSPPVGSAGNSVSTPGNAAPPPLPRSNSLPHSAVSGAGSKSSVADGAVASGVSKFATLSLHERKDRHHEKDHKRNHSMGHISSKSSDKLNLVTKARTDPAKTLGTALCPRMEDVPLLEPLICKKIAHERLTVLIFLEDCIVTACQEGFICTWGRPGKVGLLSSQNQASSPGGTVV", "length": 581, "header": "tr|A0A287BE44-1|A0A287BE44_PIG Isoform 1 of WD repeat-containing protein 20 OS=Sus scrofa OX=9823 GN=WDR20 PE=4 SV=1 CANONICAL=A0A287BE44-1" }, "isoforms": [ { "isoform_ac": "A0A287A9L0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A9L0/entry", "sequence": { "sequence": "MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFSSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELYFYIYKGVRKRLIDKSRVTCVRWVPGSESLFLVAHSSGNMYLYNVEHACGTTAPHYQLLKQGESFAVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFGDRRVIARGHGHKSWVSVVAFDPYTTSVEESDPLELSGSDEDFQDLLHFGRDRANSTQSRLSKRNSTESRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARTHTNVMNATSPPVGSAGNSVSTPGNAAPPPLPRSNSLPHSAVSGAGSKSSVADGAVASGVSKFATLSLHERKDRHHEKDHKRNHSMGHISSKSSDKLNLVTKARTDPAKTLGTALCPRMEDVPLLEPLICKKIAHERLTVLIFLEDCIVTACQEGFICTWGRPGKVVSFNP", "length": 508, "header": "tr|A0A287A9L0-1|A0A287BE44_PIG Computationally mapped isoform of WD repeat-containing protein 20 OS=Sus scrofa OX=9823 GN=WDR20 PE=4 SV=2 CANONICAL=A0A287BE44-1" }, "locus": { "chromosome": "AEMK02000452.1", "start_pos": 1034920, "end_pos": 978469, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053792.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053792.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000040491.2", "url": "https://www.ensembl.org/id/ENSSSCP00000040491.2" } ] } }, { "isoform_ac": "A0A287BE44-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BE44/entry", "sequence": { "sequence": "MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFSSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVRWVPGSESLFLVAHSSGNMYLYNVEHACGTTAPHYQLLKQGESFAVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFGDRRVIARGHGHKSWVSVVAFDPYTTSVEESDPLELSGSDEDFQDLLHFGRDRANSTQSRLSKRNSTESRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARTHTNVMNATSPPVGSAGNSVSTPGNAAPPPLPRSNSLPHSAVSGAGSKSSVADGAVASGVSKFATLSLHERKDRHHEKDHKRNHSMGHISSKSSDKLNLVTKARTDPAKTLGTALCPRMEDVPLLEPLICKKIAHERLTVLIFLEDCIVTACQEGFICTWGRPGKVGLLSSQNQASSPGGTVV", "length": 581, "header": "tr|A0A287BE44-1|A0A287BE44_PIG Isoform 1 of WD repeat-containing protein 20 OS=Sus scrofa OX=9823 GN=WDR20 PE=4 SV=1 CANONICAL=A0A287BE44-1" }, "locus": { "chromosome": "AEMK02000452.1", "start_pos": 1044556, "end_pos": 978469, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065782.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065782.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054798.1", "url": "https://www.ensembl.org/id/ENSSSCP00000054798.1" } ] } }, { "isoform_ac": "A0A5G2RAA0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RAA0/entry", "sequence": { "sequence": "MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFSSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEETSCQPLWKVEWSEERQKEGGRSSEEALASVQPAQSSGRQEGRGPGVLPDQ", "length": 194, "header": "tr|A0A5G2RAA0-1|A0A287BE44_PIG Computationally mapped isoform of WD repeat-containing protein 20 OS=Sus scrofa OX=9823 GN=WDR20 PE=4 SV=1 CANONICAL=A0A287BE44-1" }, "locus": { "chromosome": "AEMK02000452.1", "start_pos": 1037706, "end_pos": 978469, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079766.1", "url": "https://www.ensembl.org/id/ENSSSCT00000079766.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071060.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071060.1" } ] } }, { "isoform_ac": "F1S9Z2-1", "url": "https://www.uniprot.org/uniprotkb/F1S9Z2/entry", "sequence": { "sequence": "MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFSSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEETSCQPLWKVEWSEERQKEGGRSSEEALASVQRLIDKSRVTCVRWVPGSESLFLVAHSSGNMYLYNVEHACGTTAPHYQLLKQGESFAVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFGDRRVIARGHGHKSWVSVVAFDPYTTSVEESDPLELSGSDEDFQDLLHFGRDRANSTQSRLSKRNSTESRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARTHTNVMNATSPPVGSAGNSVSTPGNAAPPPLPRSNSLPHSAVSGAGSKSSVADGAVASGVSKFATLSLHERKDRHHEKDHKRNHSMGHISSKSSDKLNLVTKARTDPAKTLGTALCPRMEDVPLLEPLICKKIAHERLTVLIFLEDCIVTACQEGFICTWGRPGKVGLLSSQNQASSPGGTVV", "length": 612, "header": "tr|F1S9Z2-1|A0A287BE44_PIG Computationally mapped isoform of WD repeat-containing protein 20 OS=Sus scrofa OX=9823 GN=WDR20 PE=4 SV=4 CANONICAL=A0A287BE44-1" }, "locus": { "chromosome": "AEMK02000452.1", "start_pos": 1044556, "end_pos": 978469, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002813.5", "url": "https://www.ensembl.org/id/ENSSSCT00000002813.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002742.4", "url": "https://www.ensembl.org/id/ENSSSCP00000002742.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 420, "start_aa": "Thr", "end_pos": 420, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr420", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S9Z2", "url": "https://www.uniprot.org/uniprotkb/F1S9Z2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100516626", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100516626", "resource": "KEGG Pathway" }, { "id": "R-SSC-5689880", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5689880", "resource": "Reactome", "description": "Ub-specific processing proteases" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1LJN3-1", "protein_name": "WD repeat-containing protein 20", "gene_name": "WDR20", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDVNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSESLFLVAHSSGNMYLYNVEHTCGTTAPHYQLLKQGESFAVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIVAGGEDDLVTVWSFGDCRVIARGHGHKSWVSVVAFDPYTTSVEESDPMEFSGSDEDFQDLLHFGRDRANSTQSRLSKRNSTESRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARTHTNVMNATSPPAGSTGNSVPTPGSAAPPPLPRSNSLPHAAVSSAGSKGSVADGAIAAGVSKFATLSLHDRKDRHHEKDHKRNHSMGHISSKSSDRLNLVTKTKTDPAKALGTPLCPRMEDVPLLEPLICKKIAHERLTVLIFLEDCIVTACQEGFICTWGRPGKVGSLSAPSQATPPGGTAV", "length": 581 }, "evidence": [ { "id": "A0A287BE44", "url": "https://omabrowser.org/oma/group/A0A287BE44/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8I6A891-1", "protein_name": "WD repeat domain 20", "gene_name": "Wdr20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEEGRDSATGKAECRPACQSHVVSLCLPHQTLPLPTCHIMRTYLRAPALPDVWCWYITPSDVWREWTVSSSYALQIERLIDKSRVTCVKWVPGSESLFLVAHSSGSMYLYNVEHTCGTTAPHYQLLKQGESFAVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFLDCRVIARGHGHKSWVSVVAFDPYTTSVEESDPMEFSGSDEDFQDLLHFGRDRANSTQSRLSKRNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARTHTNVMNATSPPAGSNGNSVTTPGDSGPPPLPRSNSLPHSAVSNAGSKSSVMDGAIASGVSKFATLSLHDRKERHHEKDHKRNHSMGHISSKSSDKLNLVTKAKTDPAKTLGTSLCPRMEDVPLLEPLICKKIAHERLTVLVFLEDCLVTACQEGFICTWARPGKVVSFNP", "length": 643 }, "evidence": [ { "id": "A0A287BE44", "url": "https://omabrowser.org/oma/group/A0A287BE44/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E7FA76-1", "protein_name": "WD repeat-containing protein 20", "gene_name": "wdr20a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSKMAAEGGGKEMNEIKSQFSTREGAYKLLSHSEYSRPNRVPFNSQGSNPVRVSFVNVNDQSGNGERICFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVCLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVRWVPGSESLFLVAHSSGSMYLYNVEHTCGTTAPHYQLLKQGESYAVHTCKSKSTRNPLLKWTVGDGALNEFAFSPDGKFLAVVSQDGFLRVFNFDAVELHGTMKSYFGGLLCVCWSPDGKYIVAGGEDDLVTVWSFADCRVIARGHGHKSWVSVVAFDHYTTSVEESEPMEFSGSDEDFQEQLQCGRERANSTQSRLSKRNSTDSRPLSVTYRFGSVGQDTQLCLWDLTEDILFPHLPLSRTRTHTNVMNASAAPAASSSTLIANTANSANGSGSSTNTPGNALPAPLPRSNSLPHSAAGAANSRSSENPAAAGVSKFATLSLHERKERHPDKDHKRNHSMGHISSKSSDKLNLLTKTKTDPAKTLGTPLCPRMEDVPLLEPLVCKKIAHERLTVLIFLEDCIVTACQEGFICTWARPGKVGLLSSQTQANSPSGTVV", "length": 596 }, "evidence": [ { "id": "A0A287BE44", "url": "https://omabrowser.org/oma/group/A0A287BE44/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8TBZ3-1", "protein_name": "WD repeat-containing protein 20", "gene_name": "WDR20", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSESLFLVAHSSGNMYLYNVEHTCGTTAPHYQLLKQGESFAVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFVDCRVIARGHGHKSWVSVVAFDPYTTSVEEGDPMEFSGSDEDFQDLLHFGRDRANSTQSRLSKRNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARTHTNVMNATSPPAGSNGNSVTTPGNSVPPPLPRSNSLPHSAVSNAGSKSSVMDGAIASGVSKFATLSLHDRKERHHEKDHKRNHSMGHISSKSSDKLNLVTKTKTDPAKTLGTPLCPRMEDVPLLEPLICKKIAHERLTVLIFLEDCIVTACQEGFICTWGRPGKVVSFNP", "length": 569 }, "evidence": [ { "id": "A0A287BE44", "url": "https://omabrowser.org/oma/group/A0A287BE44/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A287BE44", "url": "https://www.uniprot.org/uniprotkb/A0A287BE44" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A287BE44", "url": "https://www.uniprot.org/uniprotkb/A0A287BE44" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "positive regulation of canonical Wnt signaling pathway", "id": "GO:0090263", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090263", "evidence": [ { "database": "UniProtKB", "id": "A0A287BE44", "url": "https://www.uniprot.org/uniprotkb/A0A287BE44" } ], "pmid": "" }, { "name": "negative regulation of ubiquitin-dependent protein catabolic process", "id": "GO:2000059", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000059", "evidence": [ { "database": "UniProtKB", "id": "A0A287BE44", "url": "https://www.uniprot.org/uniprotkb/A0A287BE44" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "deubiquitinase activator activity", "id": "GO:0035800", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035800", "evidence": [ { "database": "UniProtKB", "id": "A0A287BE44", "url": "https://www.uniprot.org/uniprotkb/A0A287BE44" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 346, "end_pos": 348, "annotation": "n_glycosylation_sequon" }, { "start_pos": 356, "end_pos": 358, "annotation": "n_glycosylation_sequon" }, { "start_pos": 405, "end_pos": 407, "annotation": "n_glycosylation_sequon" }, { "start_pos": 481, "end_pos": 483, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287BE44-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 581, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287BE44-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287BE44" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 420 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 346, "end_pos": 348 }, { "start_pos": 356, "end_pos": 358 }, { "start_pos": 405, "end_pos": 407 }, { "start_pos": 481, "end_pos": 483 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B9L1-1", "uniprot_ac": "A0A287B9L1", "uniprot_id": "A0A287B9L1_PIG", "mass": { "chemical_mass": 81763.0, "monoisotopic_mass": 81763.0 }, "refseq": { "ac": "XP_005667826", "name": "zinc finger protein 786", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005667826" }, "gene_names": [ { "name": "ZNF786", "type": "recommended", "evidence": [ { "id": "A0A287B9L1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B9L1" } ] }, { "name": "ZNF786", "type": "synonym", "evidence": [ { "id": "XP_005667826", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005667826" } ] } ], "protein_names": [ { "name": "Zinc finger protein 786", "type": "recommended", "evidence": [ { "id": "A0A287B9L1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B9L1/entry#names_and_taxonomy" } ] }, { "name": "zinc finger protein 786", "type": "synonym", "evidence": [ { "id": "XP_005667826", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005667826" } ] } ], "function": [ { "annotation": "May be involved in transcriptional regulation.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZVP9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZVP9#function" }, { "database": "UniProtKB", "id": "ARBA00003767", "url": "https://www.uniprot.org/uniprotkb/ARBA00003767#function" }, { "database": "UniProtKB", "id": "A0A287B9L1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9L1#function" }, { "database": "UniProtKB", "id": "F1SAE2", "url": "https://www.uniprot.org/uniprotkb/F1SAE2#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B9L1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9L1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZNF786", "url": "https://www.uniprot.org/uniprotkb/A0A287B9L1", "locus": { "chromosome": "9", "start_pos": 109249307, "end_pos": 109233458, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015450", "url": "https://www.ensembl.org/id/ENSSSCG00000015450" } ] } } ], "crossref": [ { "id": "ENSSSCG00000015450", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015450", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07765", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07765", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100624957", "url": "https://www.ncbi.nlm.nih.gov/gene/100624957", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001909", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001909", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036051", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036051", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050636", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050636", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050752", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050752", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100624957", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624957", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "TKSCRAP", "url": "https://omabrowser.org/oma/group/TKSCRAP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287B9L1", "url": "https://www.orthodb.org/?gene=A0A287B9L1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24384", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24384", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24384:SF241", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24384:SF241", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47772", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47772", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47772:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47772:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01352", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01352", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-212436", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_005667826", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005667826", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZVP9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZVP9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZVP9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZVP9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9L1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9L1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9L1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9L1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SAE2", "url": "https://www.uniprot.org/uniprotkb/F1SAE2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SAE2-1", "url": "https://www.uniprot.org/uniprotkb/F1SAE2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAKQAPLPLTFEDVAIYFSEQEWRNLEAWQKELYKQVMRTNYEILVSLGEGLPKPELISWIEQGREPFRNWGESQKSGNTSYSSTDVYFDPVIEGQLFWGSQQAVNSGAAHCHFQTDPLQSQCSSEPLLGKSEDVSFRLNQVVILLNPHRHDTWSLVPAVHSSRRPSHRERLPSPGTQGLPGFQEISSGEGVQHPCPVCGESFWQQSLLELHQASHSKDQPHKAQKQFSKPADVQQPRSIPQSQRHFRCPECGRGFRRKQCLRSHQAVHARESPLQGSEGKVCSHHLRAAERPSLCPGPDESVPGIPPDIERPDSRRENVRASEKAKLPRARSGEKAGLSRIGEECGLGAGGPEALELGPGLGGEKLSACSMCGRRSSRQCGLADHARVHGVERPFRSAECGRAFCQRGQLRRRRLHSEGQPFACPDCGLAFQLRTLLRAHRLRHSGERPLSCGECGRGFAHPCKLREHLRVHSGERPFGCPECGKSFRLKGILKAHERTHSRERPFRCGQCGKGFTRPSKLAEHLRVHSGERPFGCPDCGRRFRLKGQLRSHQRLHTGERPFPCPDCGKRYRVKADMKAHRLLHGGRMPFSCDCGKGFAKQSKLVEHIRTHTGEKPFQCPQCDKSFRLKAQLLSHQGLHTGERPFHCPECNKNFRERGHMLRHQRIHRPERPFACADCGKGFIYKSKLAEHIRVHTKSCHVPSEPDVKKRLSQLFAMIEADWS", "length": 724, "header": "tr|A0A287B9L1-1|A0A287B9L1_PIG Isoform 1 of Zinc finger protein 786 OS=Sus scrofa OX=9823 GN=ZNF786 PE=3 SV=3 CANONICAL=A0A287B9L1-1" }, "isoforms": [ { "isoform_ac": "A0A286ZVP9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZVP9/entry", "sequence": { "sequence": "NFLRQSFQFLFSHTPPFPRISPVVSRVVPPFSKHTTGEGLPKPELISWIEQGREPFRNWGESQKSGNTSYSSTDVYFDPVIEGQLFWGSQQAVNSGAAHCHFQTDPLQSQCSSEPLLGKSEDVSFRLNQVVILLNPHRHDTWSLVPAVHSSRRPSHRERLPSPGTQGLPGFQEISSGEGVQHPCPVCGESFWQQSLLELHQASHSKDQPHKAQKQFSKPADVQQPRSIPQSQRHFRCPECGRGFRRKQCLRSHQAVHARESPLQGSEGKVCSHHLRAAERPSLCPGPDESVPGIPPDIERPDSRRENVRASEKAKLPRARSGEKAGLSRIGEECGLGAGGPEALELGPGLGGEKLSACSMCGRRSSRQCGLADHARVHGVERPFRSAECGRAFCQRGQLRRRRLHSEGQPFACPDCGLAFQLRTLLRAHRLRHSGERPLSCGECGRGFAHPCKLREHLRVHSGERPFGCPECGKSFRLKGILKAHERTHSRERPFRCGQCGKGFTRPSKLAEHLRVHSGERPFGCPDCGRRFRLKGQLRSHQRLHTGERPFPCPDCGKRYRVKADMKAHRLLHGGRMPFSCDCGKGFAKQSKLVEHIRTHTGEKPFQCPQCDKSFRLKAQLLSHQGLHTGERPFHCPECNKNFRERGHMLRHQRIHRPERPFACADCGKGFIYKSKLAEHIRVHTKSCHVPSEPDVKKRLSQLFAMIEADWS", "length": 712, "header": "tr|A0A286ZVP9-1|A0A287B9L1_PIG Computationally mapped isoform of Zinc finger protein 786 OS=Sus scrofa OX=9823 GN=ZNF786 PE=3 SV=2 CANONICAL=A0A287B9L1-1" }, "locus": { "chromosome": "9", "start_pos": 109246541, "end_pos": 109242641, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052150.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052150.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035720.2", "url": "https://www.ensembl.org/id/ENSSSCP00000035720.2" } ] } }, { "isoform_ac": "A0A287B9L1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9L1/entry", "sequence": { "sequence": "MAKQAPLPLTFEDVAIYFSEQEWRNLEAWQKELYKQVMRTNYEILVSLGEGLPKPELISWIEQGREPFRNWGESQKSGNTSYSSTDVYFDPVIEGQLFWGSQQAVNSGAAHCHFQTDPLQSQCSSEPLLGKSEDVSFRLNQVVILLNPHRHDTWSLVPAVHSSRRPSHRERLPSPGTQGLPGFQEISSGEGVQHPCPVCGESFWQQSLLELHQASHSKDQPHKAQKQFSKPADVQQPRSIPQSQRHFRCPECGRGFRRKQCLRSHQAVHARESPLQGSEGKVCSHHLRAAERPSLCPGPDESVPGIPPDIERPDSRRENVRASEKAKLPRARSGEKAGLSRIGEECGLGAGGPEALELGPGLGGEKLSACSMCGRRSSRQCGLADHARVHGVERPFRSAECGRAFCQRGQLRRRRLHSEGQPFACPDCGLAFQLRTLLRAHRLRHSGERPLSCGECGRGFAHPCKLREHLRVHSGERPFGCPECGKSFRLKGILKAHERTHSRERPFRCGQCGKGFTRPSKLAEHLRVHSGERPFGCPDCGRRFRLKGQLRSHQRLHTGERPFPCPDCGKRYRVKADMKAHRLLHGGRMPFSCDCGKGFAKQSKLVEHIRTHTGEKPFQCPQCDKSFRLKAQLLSHQGLHTGERPFHCPECNKNFRERGHMLRHQRIHRPERPFACADCGKGFIYKSKLAEHIRVHTKSCHVPSEPDVKKRLSQLFAMIEADWS", "length": 724, "header": "tr|A0A287B9L1-1|A0A287B9L1_PIG Isoform 1 of Zinc finger protein 786 OS=Sus scrofa OX=9823 GN=ZNF786 PE=3 SV=3 CANONICAL=A0A287B9L1-1" }, "locus": { "chromosome": "9", "start_pos": 109246541, "end_pos": 109233620, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056602.3", "url": "https://www.ensembl.org/id/ENSSSCT00000056602.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053218.3", "url": "https://www.ensembl.org/id/ENSSSCP00000053218.3" } ] } }, { "isoform_ac": "F1SAE2-1", "url": "https://www.uniprot.org/uniprotkb/F1SAE2/entry", "sequence": { "sequence": "GEVDASASKHRAQAGPAGHRGALDGRGEGDRTPGRGAWRYPGPEPGPGGISKSHGQAGSGEGLPKPELISWIEQGREPFRNWGESQKSGNTSYSSTDVYFDPVIEGQLFWGSQQAVNSGAAHCHFQTDPLQSQCSSEPLLGKSEDVSFRLNQVVILLNPHRHDTWSLVPAVHSSRRPSHRERLPSPGTQGLPGFQEISSGEGVQHPCPVCGESFWQQSLLELHQASHSKDQPHKAQKQFSKPADVQQPRSIPQSQRHFRCPECGRGFRRKQCLRSHQAVHARESPLQGSEGKVCSHHLRAAERPSLCPGPDESVPGIPPDIERPDSRRENVRASEKAKLPRARSGEKAGLSRIGEECGLGAGGPEALELGPGLGGEKLSACSMCGRRSSRQCGLADHARVHGVERPFRSAECGRAFCQRGQLRRRRLHSEGQPFACPDCGLAFQLRTLLRAHRLRHSGERPLSCGECGRGFAHPCKLREHLRVHSGERPFGCPECGKSFRLKGILKAHERTHSRERPFRCGQCGKGFTRPSKLAEHLRVHSGERPFGCPDCGRRFRLKGQLRSHQRLHTGERPFPCPDCGKRYRVKADMKAHRLLHGGRMPFSCDCGKGFAKQSKLVEHIRTHTGEKPFQCPQCDKSFRLKAQLLSHQGLHTGERPFHCPECNKNFRERGHMLRHQRIHRPERPFACADCGKGFIYKSKLAEHIRVHTKSCHVPSEPDVKKRLSQLFAMIEADWS", "length": 735, "header": "tr|F1SAE2-1|A0A287B9L1_PIG Computationally mapped isoform of Zinc finger protein 786 OS=Sus scrofa OX=9823 GN=ZNF786 PE=3 SV=4 CANONICAL=A0A287B9L1-1" }, "locus": { "chromosome": "9", "start_pos": 109246541, "end_pos": 109233460, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016832.5", "url": "https://www.ensembl.org/id/ENSSSCT00000016832.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016382.4", "url": "https://www.ensembl.org/id/ENSSSCP00000016382.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SAE2", "url": "https://www.uniprot.org/uniprotkb/F1SAE2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100624957", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624957", "resource": "KEGG Pathway" }, { "id": "R-SSC-212436", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "resource": "Reactome", "description": "Generic Transcription Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q8BV42-1", "protein_name": "Zinc finger protein 786", "gene_name": "Znf786", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAGPARFPLTFEDVAIYFSEQEWQHLEAWQKELYKQVMRTNYETLISLDNGLPKPELISWIELGRELFGSWGEKKKPDKETHCSIDDVHVHLAIEEQLLESSQRAVKSEVTCHSQLNPLESRHSFGLAVGERVDASLRHDQGISLVNAQTRCGEAVVSVVHSSSEAAQRKVLSSHRTLALPGLQRVSSWQSTQNSCPVCRENSWEKNHLVKQQKGHSKSRSYRVWKKFSRQADAKQPWSISCLGCGKSFRLKQYLVRHLDIHTRKRPPQCPKCKMCFHHERTLFSHHLKNSSSQHPTCDTSFRTDSSVDLCQQIQERPAFWREDTNVPSRQKPGPSLDCEDCCHMGSKLKGLQCGCILGEDRPHSHTEYGNCFLSQSKQAGLCRTHTGEKASQCPESNKRLCLRGLQNVHQHGLRGEKPVFCRKCGQGFTKHCGLTEHTRILSGEKSFWCAQCGRNFSQKGQLLRHQRLHLEEKPFQCTMCELRFHLKSRLRAHQLQHGGERPFSCSECGRAFTHQCKLREHLRVHSGERPFQCPECHKSFRLKGVLKAHQRIHSKERPFSCGECGKGFIRQSKLTEHFRVHSGERPFQCPECDRRFRLKGQLLSHQRLHTGERPFQCPECGKSYRVKADMKAHQLLHGGQMPFSCQCGKGFAKQSKLVEHMRTHTGEKPFQCPKCDKSFRLKAQLLSHQGLHTGERPFHCPECDKNFREKGHMLRHQRIHRPERPFACGDCGKGFIYKSKLAEHIRVHTKACQVPREPDIKKRLSQLFAMIEADWS", "length": 777 }, "evidence": [ { "id": "A0A287B9L1", "url": "https://omabrowser.org/oma/group/A0A287B9L1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8N393-1", "protein_name": "Zinc finger protein 786", "gene_name": "ZNF786", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAEPPRLPLTFEDVAIYFSEQEWQDLEAWQKELYKHVMRSNYETLVSLDDGLPKPELISWIEHGGEPFRKWRESQKSGNIICSSVDMHFDPGFEEQLFWGSQQAMNSGKTKSHFQLDPESQCSFGSFVSFRPDQGITLGSPQRHDARAPPPLACGPSESTLKEGIPGPRNLDLPGLWDVPAWESTQHPWPVCGESCWENNHLVMHQRGHSKDRTRRAWEKFNKRAETQMPWSSPRVQRHFRCGVCGKSFRRKLCLLRHLAAHTGRGPFRNADGEMCFRHELTHPSHRLPQQGEKPAQCTPCGKRSLPVDSTQARRCQHSREGPASWREGRGASSSVHSGQKPGSRLPQEGNSHQEGDTEALQHGAEGPCSCSECGERSPMSARLASPCRAHTGEKPFQCAHCTKRFRLRRLLQVHQHAHGGERPFSCRKCGKGFAKQCKLTEHIRVHSGEKPFRCAKCGRNFRQRGQLLRHQRLHTDEKPFQCPECGLSFRLESMLRAHRLRHGGERPFSCSECGRGFTHQCKLREHLRVHSGERPFQCLKCDKRFRLKGILKAHQHTHSKERPFSCGECGKGFTRQSKLTEHLRVHSGERPFQCPECNRSFRLKGQLLSHQRLHTGERPFQCPECDKRYRVKADMKAHQLLHSGEMPFSCECGKGFVKHSKLIEHIRTHTGEKPFQCPKCDKSFRLKAQLLSHQGLHTGERPFHCPECDKNFRERGHMLRHQRIHRPERPFACGDCGKGFIYKSKLAEHIRVHTKSCPAPNELDIKKRLSQLFAMIEADWS", "length": 782 }, "evidence": [ { "id": "A0A287B9L1", "url": 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}, { "id": "A0A287B6C4", "url": "https://www.uniprot.org/uniprotkb/A0A287B6C4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6C4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6C4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BQQ2", "url": "https://www.uniprot.org/uniprotkb/A0A287BQQ2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BQQ2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BQQ2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QBC4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBC4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QBC4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBC4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5K1U808", "url": "https://www.uniprot.org/uniprotkb/A0A5K1U808", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5K1U808-1", "url": "https://www.uniprot.org/uniprotkb/A0A5K1U808-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RLL1", "url": "https://www.uniprot.org/uniprotkb/F1RLL1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RLL1-1", "url": "https://www.uniprot.org/uniprotkb/F1RLL1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNSAEQTVTWLITLGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIEKVYPEPRSEGECLSNIREFLRGCGASLRLETFDANDLYQGQNFNKVLSSLVTLNKVTADIGLGSDSVCARPSSHRIKSFDSLGSQPSHARTSKLFQGQYRSLDMSDNSSSQLVVRAKFNFQQTNEDELSFARGDVIHVTRVEEGGWWEGTLDGRTGWFPSNYVREVKPSEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSAYLRPLQTSEKLSSANMSYLMGNLEEICSFQQMLVQSLEECTKVPEAQQRVGGCFLSLMPQMKTLYLAYCANHPSAVSVLTQHSEELGEFMEMKGASSPGVLVLTTGLSKPFMRLDKYPALLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDIKTLGHVIHMSQVLIQCAGSEEKNERYLLLFPNILLMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCSNQQDLHEWVDHLQKQTKVTSAGNPTIKPHSVPSHTLPSHSITPSSKHADSKPAPLTPTYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSSSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEDEQRARRDLEKLLRKVLKSMNDPAWDETNL", "length": 803, "header": "tr|A0A287B6C4-1|A0A287B6C4_PIG Isoform 1 of Rho guanine nucleotide exchange factor 7 OS=Sus scrofa OX=9823 GN=ARHGEF7 PE=1 SV=1 CANONICAL=A0A287B6C4-1" }, "isoforms": [ { "isoform_ac": "A0A286ZPM4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPM4/entry", "sequence": { "sequence": "MNSAEQTVTWLITLGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIEKVYPEPRSEGECLSNIREFLRGCGASLRLETFDANDLYQGQNFNKVLSSLVTLNKVTADIGLGSDSVCARPSSHRIKSFDSLGSQPSHARTSKLFQGQYRSLDMSDNSSSQLVVRAKFNFQQTNEDELSFARGDVIHVTRVEEGGWWEGTLDGRTGWFPSNYVREVKPSEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSAYLRPLQTSEKLSSANMSYLMGNLEEICSFQQMLVQSLEECTKVPEAQQRVGGCFLSLMPQMKTLYLAYCANHPSAVSVLTQHSEELGEFMEMKGASSPGVLVLTTGLSKPFMRLDKYPALLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDIKTLGHVIHMSQVLIQCAGSEEKNERYLLLFPNILLMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCSNQQDLHEWVDHLQKQTKVTSAGNPTIKPHSVPSHTLPSHSITPSSKHADSKPAPLTPTYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSTWQGTDLMHNHVLADDDQSSLDSLGRRSSLSRLEPSDLSEDSDYDSVWTAHSYRMGSTSRSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEDEQRARRDLEKLLRKVLKSMNDPAWDETNL", "length": 862, "header": "tr|A0A286ZPM4-1|A0A287B6C4_PIG Computationally mapped isoform of Rho guanine nucleotide exchange factor 7 OS=Sus scrofa OX=9823 GN=ARHGEF7 PE=1 SV=2 CANONICAL=A0A287B6C4-1" }, "locus": { "chromosome": "11", "start_pos": 77529000, "end_pos": 77427576, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060938.3", "url": "https://www.ensembl.org/id/ENSSSCT00000060938.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033427.2", "url": "https://www.ensembl.org/id/ENSSSCP00000033427.2" } ] } }, { "isoform_ac": "A0A286ZZJ2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZZJ2/entry", "sequence": { "sequence": "MNSAEQTVTWLITLGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIEKVYPEPRSEGECLSNIREFLRGCGASLRLETFDANDLYQGQNFNKVLSSLVTLNKVTADIGLGSDSVCARPSSHRIKSFDSLGSQPSHARTSKLFQGQYRSLDMSDNSSSQLVVRAKFNFQQTNEDELSFARGDVIHVTRVEEGGWWEGTLDGRTGWFPSNYVREVKPSEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSAYLRPLQTSEKLSSANMSYLMGNLEEICSFQQMLVQSLEECTKVPEAQQRVGGCFLSLMPQMKTLYLAYCANHPSAVSVLTQHSEELGEFMEMKGASSPGVLVLTTGLSKPFMRLDKYPALLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDIKTLGHVIHMSQVLIQCAGSEEKNERYLLLFPNILLMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCSNQQDLHEWVDHLQKQTKVTSAGNPTIKPHSVPSHTLPSHSITPSSKHADSKPAPLTPTYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSTWQGTDLMHNHVLADDDQSSLDSLGRRSSLSRLEPSDLSEDSDYDSVWTAHSYRMGSTSRKSCCSYISHQN", "length": 782, "header": "tr|A0A286ZZJ2-1|A0A287B6C4_PIG Computationally mapped isoform of Rho guanine nucleotide exchange factor 7 OS=Sus scrofa OX=9823 GN=ARHGEF7 PE=1 SV=2 CANONICAL=A0A287B6C4-1" }, "locus": { "chromosome": "11", "start_pos": 77520322, "end_pos": 77427576, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065515.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065515.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036889.2", "url": "https://www.ensembl.org/id/ENSSSCP00000036889.2" } ] } }, { "isoform_ac": "A0A287A2A3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A2A3/entry", "sequence": { "sequence": "MKTFDANDLYQGQNFNKVLSSLVTLNKVTADIGLGSDSVCARPSSHRIKSFDSLGSQPSHARTSKLFQGQYRSLDMSDNSSSQLVVRAKFNFQQTNEDELSFARGDVIHVTRVEEGGWWEGTLDGRTGWFPSNYVREVKPSEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSAYLRPLQTSEKLSSANMSYLMGNLEEICSFQQMLVQSLEECTKVPEAQQRVGGCFLSLMPQMKTLYLAYCANHPSAVSVLTQHSEELGEFMEMKGASSPGVLVLTTGLSKPFMRLDKYPALLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDIKTLGHVIHMSQVLIQCAGSEEKNERYLLLFPNILLMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCSNQQDLHEWVDHLQKQTKVTSAGNPTIKPHSVPSHTLPSHSITPSSKHADSKPAPLTPTYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSSSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEDEQRARRDLEKLLRKVLKSMNDPAWDETNL", "length": 721, "header": "tr|A0A287A2A3-1|A0A287B6C4_PIG Computationally mapped isoform of Rho guanine nucleotide exchange factor 7 OS=Sus scrofa OX=9823 GN=ARHGEF7 PE=1 SV=1 CANONICAL=A0A287B6C4-1" }, "locus": { "chromosome": "11", "start_pos": 77529000, "end_pos": 77473345, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044668.3", "url": "https://www.ensembl.org/id/ENSSSCT00000044668.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038046.1", "url": "https://www.ensembl.org/id/ENSSSCP00000038046.1" } ] } }, { "isoform_ac": "A0A287ALQ3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ALQ3/entry", "sequence": { "sequence": "MSRPSQLLPWLDSGGRTAESLPRLRVGGVSGAPGSLCAPDFTGSWKWSVMTRCFLTDSVSKLLETFDANDLYQGQNFNKVLSSLVTLNKVTADIGLGSDSVCARPSSHRIKSFDSLGSQPSHARTSKLFQGQYRSLDMSDNSSSQLVVRAKFNFQQTNEDELSFARGDVIHVTRVEEGGWWEGTLDGRTGWFPSNYVREVKPSEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSAYLRPLQTSEKLSSANMSYLMGNLEEICSFQQMLVQSLEECTKVPEAQQRVGGCFLSLMPQMKTLYLAYCANHPSAVSVLTQHSEELGEFMEMKGASSPGVLVLTTGLSKPFMRLDKYPALLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDIKTLGHVIHMSQVLIQCAGSEEKNERYLLLFPNILLMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCSNQQDLHEWVDHLQKQTKVTSAGNPTIKPHSVPSHTLPSHSITPSSKHADSKPAPLTPTYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSSSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEDEQRARRDLEKLLRKVLKSMNDPAWDETNL", "length": 783, "header": "tr|A0A287ALQ3-1|A0A287B6C4_PIG Computationally mapped isoform of Rho guanine nucleotide exchange factor 7 OS=Sus scrofa OX=9823 GN=ARHGEF7 PE=1 SV=1 CANONICAL=A0A287B6C4-1" }, "locus": { "chromosome": "11", "start_pos": 77529000, "end_pos": 77460837, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058962.2", "url": "https://www.ensembl.org/id/ENSSSCT00000058962.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000044930.2", "url": "https://www.ensembl.org/id/ENSSSCP00000044930.2" } ] } }, { "isoform_ac": "A0A287B6C4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6C4/entry", "sequence": { "sequence": "MNSAEQTVTWLITLGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIEKVYPEPRSEGECLSNIREFLRGCGASLRLETFDANDLYQGQNFNKVLSSLVTLNKVTADIGLGSDSVCARPSSHRIKSFDSLGSQPSHARTSKLFQGQYRSLDMSDNSSSQLVVRAKFNFQQTNEDELSFARGDVIHVTRVEEGGWWEGTLDGRTGWFPSNYVREVKPSEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSAYLRPLQTSEKLSSANMSYLMGNLEEICSFQQMLVQSLEECTKVPEAQQRVGGCFLSLMPQMKTLYLAYCANHPSAVSVLTQHSEELGEFMEMKGASSPGVLVLTTGLSKPFMRLDKYPALLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDIKTLGHVIHMSQVLIQCAGSEEKNERYLLLFPNILLMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCSNQQDLHEWVDHLQKQTKVTSAGNPTIKPHSVPSHTLPSHSITPSSKHADSKPAPLTPTYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSSSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEDEQRARRDLEKLLRKVLKSMNDPAWDETNL", "length": 803, "header": "tr|A0A287B6C4-1|A0A287B6C4_PIG Isoform 1 of Rho guanine nucleotide exchange factor 7 OS=Sus scrofa OX=9823 GN=ARHGEF7 PE=1 SV=1 CANONICAL=A0A287B6C4-1" }, "locus": { "chromosome": "11", "start_pos": 77529000, "end_pos": 77427576, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061094.3", "url": "https://www.ensembl.org/id/ENSSSCT00000061094.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052066.2", "url": "https://www.ensembl.org/id/ENSSSCP00000052066.2" } ] } }, { "isoform_ac": "A0A287BQQ2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BQQ2/entry", "sequence": { "sequence": "MNSAEQTVTWLITLGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIEKTFDANDLYQGQNFNKVLSSLVTLNKVTADIGLGSDSVCARPSSHRIKSFDSLGSQPSHARTSKLFQGQYRSLDMSDNSSSQLVVRAKFNFQQTNEDELSFARGDVIHVTRVEEGGWWEGTLDGRTGWFPSNYVREVKPSEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSAYLRPLQTSEKLSSANMSYLMGNLEEICSFQQMLVQSLEECTKVPEAQQRVGGCFLSLMPQMKTLYLAYCANHPSAVSVLTQHSEELGEFMEMKGASSPGVLVLTTGLSKPFMRLDKYPALLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDIKTLGHVIHMSQVLIQCAGSEEKNERYLLLFPNILLMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCSNQQDLHEWVDHLQKQTKVTSAGNPTIKPHSVPSHTLPSHSITPSSKHADSKPAPLTPTYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSTWQGTDLMHNHVLADDDQSSLDSLGRRSSLSRLEPSDLSEDSDYDSVWTAHSYRMGSTSRKSCCSYISHQN", "length": 753, "header": "tr|A0A287BQQ2-1|A0A287BQQ2_PIG Computationally mapped isoform of Rho guanine nucleotide exchange factor 7 OS=Sus scrofa OX=9823 GN=ARHGEF7 PE=1 SV=2 CANONICAL=A0A287B6C4-1" }, "locus": { "chromosome": "11", "start_pos": 77520322, "end_pos": 77427576, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056474.3", "url": "https://www.ensembl.org/id/ENSSSCT00000056474.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058957.2", "url": "https://www.ensembl.org/id/ENSSSCP00000058957.2" } ] } }, { "isoform_ac": "A0A5G2QBC4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBC4/entry", "sequence": { "sequence": "MNSAEQTVTWLITLGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIEKVYPEPRSEGECLSNIREFLRGCGASLRLETFDANDLYQGQNFNKVLSSLVTLNKVTADIGLGSDSVCARPSSHRIKSFDSLGSQPSHARTSKLFQGQYRSLDMSDNSSSQLVVRAKFNFQQTNEDELSFARGDVIHVTRVEEGGWWEGTLDGRTGWFPSNYVREVKPSEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSAYLRPLQTSEKLSSANMSYLMGNLEEICSFQQMLVQSLEECTKVPEAQQRVGGCFLSLMPQMKTLYLAYCANHPSAVSVLTQHSEELGEFMEMKGASSPGVLVLTTGLSKPFMRLDKYPALLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDIKTLGHVIHMSQVLIQCAGSEEKNERYLLLFPNILLMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCSNQQDLHEWVDHLQKQTKVTSAGNPTIKPHSVPSHTLPSHSITPSSKHADSKPAPLTPTYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKTWQGTDLMHNHVLADDDQSSLDSLGRRSSLSRLEPSDLSEDSDYDSVWTAHSYRMGSTSRSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEDEQRARRDLEKLLRKVLKSMNDPAWDETNL", "length": 832, "header": "tr|A0A5G2QBC4-1|A0A287B6C4_PIG Computationally mapped isoform of Rho guanine nucleotide exchange factor 7 OS=Sus scrofa OX=9823 GN=ARHGEF7 PE=1 SV=2 CANONICAL=A0A287B6C4-1" }, "locus": { "chromosome": "11", "start_pos": 77529000, "end_pos": 77427576, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084960.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084960.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060761.2", "url": "https://www.ensembl.org/id/ENSSSCP00000060761.2" } ] } }, { "isoform_ac": "A0A5K1U808-1", "url": "https://www.uniprot.org/uniprotkb/A0A5K1U808/entry", "sequence": { "sequence": "MNSAEQTVTWLITLGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIEKVYPEPRSEGECLSNIREFLRGCGASLRLETFDANDLYQGQNFNKVLSSLVTLNKVTADIGLGSDSVCARPSSHRIKSFDSLGSQPSHARTSKLFQGQYRSLDMSDNSSSQLVVRAKFNFQQTNEDELSFARGDVIHVTRVEEGGWWEGTLDGRTGWFPSNYVREVKPSEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSAYLRPLQTSEKLSSANMSYLMGNLEEICSFQQMLVQSLEECTKVPEAQQRVGGCFLSLMPQMKTLYLAYCANHPSAVSVLTQHSEELGEFMEMKGASSPGVLVLTTGLSKPFMRLDKYPALLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDIKTLGHVIHMSQVLIQCAGSEEKNERYLLLFPNILLMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCSNQQDLHEWVDHLQKQTKVTSAGNPTIKPHSVPSHTLPSHSITPSSKHADSKPAPLTPTYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSTWQGTDLMHNHVLADDDQSSLDSLGRRSSLSRLEPSDLSEDSDYDSVWTAHSYRMGSTSRSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSAGGEVHCVGSAHFQDNKKMKKSLEDEQRARRDLEKLLRKVLKSMNDPAWDETNL", "length": 859, "header": "tr|A0A5K1U808-1|A0A287B6C4_PIG Computationally mapped isoform of Rho guanine nucleotide exchange factor 7 OS=Sus scrofa OX=9823 GN=ARHGEF7 PE=1 SV=1 CANONICAL=A0A287B6C4-1" }, "locus": { "chromosome": "11", "start_pos": 77529000, "end_pos": 77427576, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025748.3", "url": "https://www.ensembl.org/id/ENSSSCT00000025748.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000027790.3", "url": "https://www.ensembl.org/id/ENSSSCP00000027790.3" } ] } }, { "isoform_ac": "F1RLL1-1", "url": "https://www.uniprot.org/uniprotkb/F1RLL1/entry", "sequence": { "sequence": "MSDNSSSQLVVRAKFNFQQTNEDELSFARGDVIHVTRVEEGGWWEGTLDGRTGWFPSNYVREVKPSEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSAYLRPLQTSEKLSSANMSYLMGNLEEICSFQQMLVQSLEECTKVPEAQQRVGGCFLSLMPQMKTLYLAYCANHPSAVSVLTQHSEELGEFMEMKGASSPGVLVLTTGLSKPFMRLDKYPALLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDIKTLGHVIHMSQVLIQCAGSEEKNERYLLLFPNILLMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCSNQQDLHEWVDHLQKQTKVTSAGNPTIKPHSVPSHTLPSHSITPSSKHADSKPAPLTPTYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEDEQRARRDLEKLLRKVLKSMNDPAWDETNL", "length": 616, "header": "tr|F1RLL1-1|A0A287B6C4_PIG Computationally mapped isoform of Rho guanine nucleotide exchange factor 7 OS=Sus scrofa OX=9823 GN=ARHGEF7 PE=1 SV=5 CANONICAL=A0A287B6C4-1" }, "locus": { "chromosome": "11", "start_pos": 77529000, "end_pos": 77484692, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000010470.5", "url": "https://www.ensembl.org/id/ENSSSCT00000010470.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000010198.5", "url": "https://www.ensembl.org/id/ENSSSCP00000010198.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBC4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBC4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100516509", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100516509", "resource": "KEGG Pathway" }, { "id": "R-SSC-182971", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-182971", "resource": "Reactome", "description": "EGFR downregulation" }, { "id": "R-SSC-193648", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-193648", "resource": "Reactome", "description": "NRAGE signals death through JNK" }, { "id": "R-SSC-3928664", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3928664", "resource": "Reactome", "description": "Ephrin signaling" }, { "id": "R-SSC-416482", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-416482", "resource": "Reactome", "description": "G alpha (12/13) signalling events" }, { "id": "R-SSC-8980692", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8980692", "resource": "Reactome", "description": "RHOA GTPase cycle" }, { "id": "R-SSC-9013148", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "resource": "Reactome", "description": "CDC42 GTPase cycle" }, { "id": "R-SSC-9013149", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013149", "resource": "Reactome", "description": "RAC1 GTPase cycle" }, { "id": "R-SSC-9013406", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013406", "resource": "Reactome", "description": "RHOQ GTPase cycle" }, { "id": "R-SSC-9013420", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013420", "resource": "Reactome", "description": "RHOU GTPase cycle" }, { "id": "R-SSC-9013424", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013424", "resource": "Reactome", "description": "RHOV GTPase cycle" } ], "orthologs": [ 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"glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8M2BEZ3-1", "protein_name": "Rho guanine nucleotide exchange factor 7a isoform X5", "gene_name": "arhgef7a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": 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"https://omabrowser.org/oma/group/A0A287B6C4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "F1MBM9-1", "protein_name": "Rho guanine nucleotide exchange factor 7", "gene_name": "ARHGEF7", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": 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"glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A287B6C4", "url": "https://www.uniprot.org/uniprotkb/A0A287B6C4" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A287B6C4", "url": "https://www.uniprot.org/uniprotkb/A0A287B6C4" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A287B6C4", "url": "https://www.uniprot.org/uniprotkb/A0A287B6C4" } ], "pmid": "" }, { "name": "lamellipodium", "id": "GO:0030027", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030027", "evidence": [ { "database": "UniProtKB", "id": 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"evidence": [ { "database": "UniProtKB", "id": "A0A287B6C4", "url": "https://www.uniprot.org/uniprotkb/A0A287B6C4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "lamellipodium assembly", "id": "GO:0030032", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030032", "evidence": [ { "database": "UniProtKB", "id": "A0A287B6C4", "url": "https://www.uniprot.org/uniprotkb/A0A287B6C4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 161, "end_pos": 163, "annotation": "n_glycosylation_sequon" }, { "start_pos": 247, "end_pos": 249, "annotation": "n_glycosylation_sequon" }, { "start_pos": 290, "end_pos": 292, "annotation": "n_glycosylation_sequon" }, { "start_pos": 422, "end_pos": 424, "annotation": "n_glycosylation_sequon" }, { "start_pos": 710, "end_pos": 712, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], 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{ "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287BF77-1", "uniprot_ac": "A0A287BF77", "uniprot_id": "A0A287BF77_PIG", "mass": { "chemical_mass": 82644.0, "monoisotopic_mass": 82644.0 }, "refseq": { "ac": "XP_020949029", "name": "transcriptional repressor CTCF isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949029" }, "gene_names": [ { "name": "CTCF", "type": "recommended", "evidence": [ { "id": "A0A287BF77", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BF77" } ] }, { "name": 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"transcriptional repressor CTCF isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020949029", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949029" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BF77", "url": "https://www.uniprot.org/uniprotkb/A0A287BF77" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CTCF", "url": "https://www.uniprot.org/uniprotkb/A0A287BF77", "locus": { "chromosome": "6", "start_pos": 28261009, "end_pos": 28195647, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024253", "url": "https://www.ensembl.org/id/ENSSSCG00000024253" } ] } } ], "crossref": [ { "id": "A0A287BF77", "url": "https://alphafold.ebi.ac.uk/entry/A0A287BF77", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000024253", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024253", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100623274", "url": "https://www.ncbi.nlm.nih.gov/gene/100623274", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050331", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050331", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056438", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056438", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100623274", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623274", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1UJI5", "url": "https://www.orthodb.org/?gene=A0A4X1UJI5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR16515", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16515", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16515:SF49", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16515:SF49", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24379", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24379", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24379:SF81", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24379:SF81", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23611", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23611", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-9943962", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9943962", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020949029", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949029", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287BF77", "url": "https://www.uniprot.org/uniprotkb/A0A287BF77", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BF77-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BF77-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UJI5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UJI5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UJI5-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UJI5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UKY7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UKY7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UKY7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UKY7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDB1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDB1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDB1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDB1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDTCHLPQNQTDGGEVVQDVNSSVQMVMMEQLDPTLLQMKTEVMEGAVAPETEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQGELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKRKMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRGRPPGRTNQPKQTQPIIQVEDQNTGAIENIIVEVKKEPDAEPAEGEEEEAQPAATDAPNGDLTPEMILSMMDR", "length": 725, "header": "tr|A0A287BF77-1|A0A287BF77_PIG Isoform 1 of Transcriptional repressor CTCF OS=Sus scrofa OX=9823 GN=CTCF PE=1 SV=1 CANONICAL=A0A287BF77-1" }, "isoforms": [ { "isoform_ac": "A0A287BF77-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BF77/entry", "sequence": { "sequence": "MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDTCHLPQNQTDGGEVVQDVNSSVQMVMMEQLDPTLLQMKTEVMEGAVAPETEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQGELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKRKMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRGRPPGRTNQPKQTQPIIQVEDQNTGAIENIIVEVKKEPDAEPAEGEEEEAQPAATDAPNGDLTPEMILSMMDR", "length": 725, "header": "tr|A0A287BF77-1|A0A287BF77_PIG Isoform 1 of Transcriptional repressor CTCF OS=Sus scrofa OX=9823 GN=CTCF PE=1 SV=1 CANONICAL=A0A287BF77-1" }, "locus": { "chromosome": "6", "start_pos": 28259701, "end_pos": 28234599, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065407.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065407.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054977.2", "url": "https://www.ensembl.org/id/ENSSSCP00000054977.2" } ] } }, { "isoform_ac": "A0A4X1UJI5-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UJI5/entry", "sequence": { "sequence": "MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDTCHLPQNQTDGGEVVQDVNSSVQMVMMEQLDPTLLQMKTEVMEGAVAPETEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQGELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKRKMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRGRPPGRTNQPKQTQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPAEGEEEEAQPAATDAPNGDLTPEMILSMMDR", "length": 727, "header": "tr|A0A4X1UJI5-1|A0A4X1UJI5_PIG Computationally mapped isoform of Transcriptional repressor CTCF OS=Sus scrofa OX=9823 GN=CTCF PE=1 SV=1 CANONICAL=A0A287BF77-1" }, "locus": { "chromosome": "6", "start_pos": 28259701, "end_pos": 28234599, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038973.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038973.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036565.1", "url": "https://www.ensembl.org/id/ENSSSCP00000036565.1" } ] } }, { "isoform_ac": "A0A4X1UKY7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UKY7/entry", "sequence": { "sequence": "MIRVPAVVHRDHWRLGSAGTQEGEMEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDTCHLPQNQTDGGEVVQDVNSSVQMVMMEQLDPTLLQMKTEVMEGAVAPETEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQGELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKRKMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRGRPPGRTNQPKQTQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPAEGEEEEAQPAATDAPNGDLTPEMILSMMDR", "length": 751, "header": "tr|A0A4X1UKY7-1|A0A287BF77_PIG Computationally mapped isoform of Transcriptional repressor CTCF OS=Sus scrofa OX=9823 GN=CTCF PE=1 SV=1 CANONICAL=A0A287BF77-1" }, "locus": { "chromosome": "6", "start_pos": 28259701, "end_pos": 28233975, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030108.4", "url": "https://www.ensembl.org/id/ENSSSCT00000030108.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019814.3", "url": "https://www.ensembl.org/id/ENSSSCP00000019814.3" } ] } }, { "isoform_ac": "A0A8W4FDB1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDB1/entry", "sequence": { "sequence": "MLWGGQNRKKERRTIDQEEGEMEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDTCHLPQNQTDGGEVVQDVNSSVQMVMMEQLDPTLLQMKTEVMEGAVAPETEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQGELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKRKMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRGRPPGRTNQPKQTQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPAEGEEEEAQPAATDAPNGDLTPEMILSMMDR", "length": 748, "header": "tr|A0A8W4FDB1-1|A0A287BF77_PIG Computationally mapped isoform of Transcriptional repressor CTCF OS=Sus scrofa OX=9823 GN=CTCF PE=1 SV=1 CANONICAL=A0A287BF77-1" }, "locus": { "chromosome": "6", "start_pos": 28259701, "end_pos": 28234144, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000101355.1", "url": "https://www.ensembl.org/id/ENSSSCT00000101355.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076295.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076295.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 642, "start_aa": "Thr", "end_pos": 642, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr642", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UKY7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UKY7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100623274", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623274", "resource": "KEGG Pathway" }, { "id": "R-SSC-9943962", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9943962", "resource": "Reactome", "description": "CHD6, CHD7, CHD8, CHD9 subfamily" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 11, "go_terms": [ { "name": "positive regulation of macromolecule biosynthetic process", "id": "GO:0010557", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010557", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF77", "url": "https://www.uniprot.org/uniprotkb/A0A287BF77" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF77", "url": "https://www.uniprot.org/uniprotkb/A0A287BF77" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": 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"MPRRKQEQPKRLPSPSEEESGKPFQCPICGLVIKRKSYWKRHMVIHTGLKSHQCPLCPFRCARKDNLKSHMKVHQHQDRGETFQCQLCPFTSSRHFSLKLHMRCHQHFLRTEAKVKEEIPDPDVKGSPHLSDSACLGQQREGGGTELVGTMMTSSTPERTSQGGAGVSPLLVKEEPKEDNGLPTSFTLNATDRPANHAKLREPSEYVANSASALFSQDISVKMASDFLMKLSAANQKEPMNLNFKVKEEPKEEEALSATLPRSSYVFSPESEVPAPSISEDTLKPQEAKGNVLRRDMSVKAASELLMKLSAESYKDTQMVKVKEEPMDVDVQDSPASVSPSRNVGYSTLIGREKTEPLQKLPEGRVPPERNLFSQDISVKMASELLFQLSEKVSKEHTHTKENTIRTTTSPFFSEDTFRQSPFTSNSKDLLPSESVLHGRISAPETEKIVLEAGNGLPSWKFNDQLFPCDVCGKVFGRQQTLSRHLSLHTEERKYKCHLCPYAAKCRANLNQHLTVHSVKLVSTDTEDIVSAVTSEGSDGKKHRYYYSCHVCGFETELNVQFVSHMSLHVDKEQWMFSICCMACDFVTMEEAEIKAHVGTKHTGEDRKTPSESNSPSSSSLSALSDSANSKDDSDSSQKNKSGNNLLVISVVPGSQPSLNSEEKPEKGFECVFCNFVCKTKTMFERHLQIHLITRMFECDVCHKFMKTPEQLLEHKKCHTVPTGGLNSGQW", "length": 731, "header": "tr|A0A4X1VI24-1|A0A287BAN9_PIG Computationally mapped isoform of Zinc finger protein 827 OS=Sus scrofa OX=9823 GN=ZNF827 PE=3 SV=1 CANONICAL=A0A287BAN9-1" }, "locus": { "chromosome": "8", "start_pos": 82780309, "end_pos": 82597126, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037289.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037289.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054827.2", "url": "https://www.ensembl.org/id/ENSSSCP00000054827.2" } ] } }, { "isoform_ac": "A0A8D1N8C9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1N8C9/entry", "sequence": { "sequence": 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"length": 1350, "header": "tr|A0A8D1N8C9-1|A0A287BAN9_PIG Computationally mapped isoform of Zinc finger protein 827 OS=Sus scrofa OX=9823 GN=ZNF827 PE=3 SV=1 CANONICAL=A0A287BAN9-1" }, "locus": { "chromosome": "8", "start_pos": 82782581, "end_pos": 82597126, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039993.2", "url": "https://www.ensembl.org/id/ENSSSCT00000039993.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000040846.2", "url": "https://www.ensembl.org/id/ENSSSCP00000040846.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VI24", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VI24" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100523980", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100523980", "resource": "KEGG Pathway" }, { "id": "R-SSC-9940951", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9940951", "resource": "Reactome", "description": "Interaction of NuRD complexes with transcription factors" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAN9", "url": "https://www.uniprot.org/uniprotkb/A0A287BAN9" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAN9", "url": "https://www.uniprot.org/uniprotkb/A0A287BAN9" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAN9", "url": "https://www.uniprot.org/uniprotkb/A0A287BAN9" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAN9", "url": "https://www.uniprot.org/uniprotkb/A0A287BAN9" } ], "pmid": "" }, { "name": "NuRD complex binding", "id": "GO:0120325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0120325", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAN9", "url": "https://www.uniprot.org/uniprotkb/A0A287BAN9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAN9", "url": "https://www.uniprot.org/uniprotkb/A0A287BAN9" } ], "pmid": "" }, { "name": "chromosome, telomeric region", "id": "GO:0000781", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000781", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAN9", "url": "https://www.uniprot.org/uniprotkb/A0A287BAN9" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAN9", "url": "https://www.uniprot.org/uniprotkb/A0A287BAN9" } ], "pmid": "" }, { "name": "ribonucleoprotein complex", "id": "GO:1990904", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990904", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAN9", "url": "https://www.uniprot.org/uniprotkb/A0A287BAN9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 7, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAN9", "url": "https://www.uniprot.org/uniprotkb/A0A287BAN9" } ], "pmid": "" }, { "name": "chromatin remodeling", "id": "GO:0006338", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006338", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAN9", "url": "https://www.uniprot.org/uniprotkb/A0A287BAN9" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAN9", "url": "https://www.uniprot.org/uniprotkb/A0A287BAN9" } ], "pmid": "" }, { "name": "negative regulation of DNA-templated transcription", "id": "GO:0045892", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045892", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAN9", "url": "https://www.uniprot.org/uniprotkb/A0A287BAN9" } ], "pmid": "" }, { "name": "telomere maintenance", "id": "GO:0000723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000723", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAN9", "url": "https://www.uniprot.org/uniprotkb/A0A287BAN9" } ], "pmid": "" }, { "name": "establishment of protein localization to telomere", "id": "GO:0070200", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070200", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAN9", "url": "https://www.uniprot.org/uniprotkb/A0A287BAN9" } ], "pmid": "" }, { "name": "negative regulation of shelterin complex assembly", "id": "GO:1904791", "url": 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287BF36-1", "uniprot_ac": "A0A287BF36", "uniprot_id": "A0A287BF36_PIG", "mass": { "chemical_mass": 67551.0, "monoisotopic_mass": 67551.0 }, "refseq": {}, "gene_names": [ { "name": "SLC6A18", "type": "recommended", "evidence": [ { "id": "A0A287BF36", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BF36" } ] } ], "protein_names": [ { "name": "Transporter", "type": "recommended", "evidence": [ { "id": "A0A287BF36", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BF36/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BF36", "url": "https://www.uniprot.org/uniprotkb/A0A287BF36" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SLC6A18", "url": "https://www.uniprot.org/uniprotkb/A0A287BF36", "locus": { "chromosome": "16", "start_pos": 79277696, "end_pos": 79292530, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000017117", "url": "https://www.ensembl.org/id/ENSSSCG00000017117" } ] } } ], "crossref": [ { "id": "A0A287BF36", "url": "https://alphafold.ebi.ac.uk/entry/A0A287BF36", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000017117", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000017117", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR000175", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000175", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002438", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002438", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037272", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037272", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "VLTWVMW", "url": "https://omabrowser.org/oma/group/VLTWVMW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR11616", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11616", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11616:SF109", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11616:SF109", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00209", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00209", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287BF36", "url": "https://www.uniprot.org/uniprotkb/A0A287BF36", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BF36-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BF36-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F738", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F738", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F738-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F738-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FG26", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FG26", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FG26-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FG26-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FJT1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJT1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FJT1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJT1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S028", "url": "https://www.uniprot.org/uniprotkb/F1S028", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S028-1", "url": "https://www.uniprot.org/uniprotkb/F1S028-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MACAAGPDPPSASAEDERPQWDNKLQYLLSCVGFAVGLGNLWRFPYLCQTHGGGAFLIPYVIALVFEGIPLFHVELAIGQRLRRGSIGVWRAISPYLGGVGLGCFTVSLLVSLYYNTILAWVLWYLLNSFQHPLPWSTCPLDLNRTGLVQECQDTSPVTYFWYRQTLNITPDINDSGAVQGRLLLCMAASWAVVYLCVIRGIETAGKAIYFTALFPYVVLSVFLVRGLTLPGATEGLLHLFTPDMQVLRNPRVWLDAATQIFFSLSLAFGGHIAFASYNPPRNHCERDAVTIALVNSMTSLYASIAVFSVLGFKAANDHGRCLDGNILLLLNAFDLPDQSVSRDDYAAVLSHLNATQPERVARLPLQVCHLEDFLDKSASGTGLAFIVFAEAVLHMPGAPVWAVLFFGMLFSLGLSSMFGNMESILTPLFDQWVRPRRVPKEVLTGLVCLACFLLASGFTLQSGNYWLEIFDQHAASLNLIFLAFFEVVGVIYVYGMKRFCDDVAWMTGRRPGLYWQVTWKVVSPLLLLTILVAYLALLASRPPSYRAWNPQHEAFPSREEKPYQGWVQVACVLLSFLPSLWVPGVALAQLLAQRRQKQPSAPQDSGGCL", "length": 610, "header": "tr|A0A287BF36-1|A0A287BF36_PIG Isoform 1 of Transporter OS=Sus scrofa OX=9823 GN=SLC6A18 PE=3 SV=2 CANONICAL=A0A287BF36-1" }, "isoforms": [ { "isoform_ac": "A0A287BF36-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BF36/entry", "sequence": { "sequence": "MACAAGPDPPSASAEDERPQWDNKLQYLLSCVGFAVGLGNLWRFPYLCQTHGGGAFLIPYVIALVFEGIPLFHVELAIGQRLRRGSIGVWRAISPYLGGVGLGCFTVSLLVSLYYNTILAWVLWYLLNSFQHPLPWSTCPLDLNRTGLVQECQDTSPVTYFWYRQTLNITPDINDSGAVQGRLLLCMAASWAVVYLCVIRGIETAGKAIYFTALFPYVVLSVFLVRGLTLPGATEGLLHLFTPDMQVLRNPRVWLDAATQIFFSLSLAFGGHIAFASYNPPRNHCERDAVTIALVNSMTSLYASIAVFSVLGFKAANDHGRCLDGNILLLLNAFDLPDQSVSRDDYAAVLSHLNATQPERVARLPLQVCHLEDFLDKSASGTGLAFIVFAEAVLHMPGAPVWAVLFFGMLFSLGLSSMFGNMESILTPLFDQWVRPRRVPKEVLTGLVCLACFLLASGFTLQSGNYWLEIFDQHAASLNLIFLAFFEVVGVIYVYGMKRFCDDVAWMTGRRPGLYWQVTWKVVSPLLLLTILVAYLALLASRPPSYRAWNPQHEAFPSREEKPYQGWVQVACVLLSFLPSLWVPGVALAQLLAQRRQKQPSAPQDSGGCL", "length": 610, "header": "tr|A0A287BF36-1|A0A287BF36_PIG Isoform 1 of Transporter OS=Sus scrofa OX=9823 GN=SLC6A18 PE=3 SV=2 CANONICAL=A0A287BF36-1" }, "locus": { "chromosome": "16", "start_pos": 79292398, "end_pos": 79277699, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065691.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065691.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054937.2", "url": "https://www.ensembl.org/id/ENSSSCP00000054937.2" } ] } }, { "isoform_ac": "A0A8W4F738-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F738/entry", "sequence": { "sequence": "MVRAGPDERPQWDNKLQYLLSCVGFAVGLGNLWRFPYLCQTHGGGAFLIPYVIALVFEGIPLFHVELAIGQRLRRGSIGVWRAISPYLGGVGLGCFTVSLLVSLYYNTILAWVLWYLLNSFQHPLPWSTCPLDLNRTGLVQECQDTSPVTYFWYRQTLNITPDINDSGAVQGRLLLCMAASWAVVYLCVIRGIETAGKAIYFTALFPYVVLSVFLVRGLTLPGATEGLLHLFTPDMQVLRNPRVWLDAATQIFFSLSLAFGGHIAFASYNPPRNHCERDAVTIALVNSMTSLYASIAVFSVLGFKAANDHGRCLDGNILLLLNAFDLPDQSVSRDDYAAVLSHLNATQPERVARLPLQVCHLEDFLDKSASGTGLAFIVFAEAVLHMPGAPVWAVLFFGMLFSLGLSSMFGNMESILTPLFDQWVRPRRVPKEVLTGLVCLACFLLASGFTLQSGNYWLEIFDQHAASLNLIFLAFFEVVGVIYVYGMKRFCDDVAWMTGRRPGLYWQVTWKVVSPLLLLTILVAYLALLASRPPNPWASGAPGATAPTPAAPATLDKGLGQRQGDRSSSSVLRASGSPWALLYGCGAEPRFPRAENAQPGLR", "length": 603, "header": "tr|A0A8W4F738-1|A0A287BF36_PIG Computationally mapped isoform of Transporter OS=Sus scrofa OX=9823 GN=SLC6A18 PE=3 SV=1 CANONICAL=A0A287BF36-1" }, "locus": { "chromosome": "16", "start_pos": 79292530, "end_pos": 79279350, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102624.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102624.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075014.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075014.1" } ] } }, { "isoform_ac": "A0A8W4FG26-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FG26/entry", "sequence": { "sequence": "PQLPHPLWPAALWLRKAAVPTRPRDRGAFLIPYVIALVFEGIPLFHVELAIGQRLRRGSIGVWRAISPYLGGVGLGCFTVSLLVSLYYNTILAWVLWYLLNSFQHPLPWSTCPLDLNRTGLVQECQDTSPVTYFWYRQTLNITPDINDSGAVQGRLLLCMAASWAVVYLCVIRGIETAGKAIYFTALFPYVVLSVFLVRGLTLPGATEGLLHLFTPDVLRNPRVWLDAATQIFFSLSLAFGGHIAFASYNPPRNHCERDAVTIALVNSMTSLYASIAVFSVLGFKAANDHGRCLDGNILLLLNAFDLPDQSVSRDDYAAVLSHLNATQPERVARLPLQVCHLEDFLDKSASGTGLAFIVFAEAVLHMPGAPVWAVLFFGMLFSLGLSSMFGNMESILTPLFDQWVRPRRVPKEVLTGLVCLACFLLASGFTLQSGNYWLEIFDQHAASLNLIFLAFFEVVGVIYVYGMKRFCDDVAWMTGRRPGLYWQVTWKVVSPLLLLTILVAYLALLASRPPSYRAWNPQHVGATRAQSPFAVAIGTLRAM", "length": 544, "header": "tr|A0A8W4FG26-1|A0A287BF36_PIG Computationally mapped isoform of Transporter OS=Sus scrofa OX=9823 GN=SLC6A18 PE=3 SV=1 CANONICAL=A0A287BF36-1" }, "locus": { "chromosome": "16", "start_pos": 79288532, "end_pos": 79279576, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000104750.1", "url": "https://www.ensembl.org/id/ENSSSCT00000104750.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078379.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078379.1" } ] } }, { "isoform_ac": "A0A8W4FJT1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJT1/entry", "sequence": { "sequence": "MGTGREVGRANGELAWALGPGLEPASSPRGSRFCSHSSSPQPQPTGVLLSLPGHPAHTSIPAEPVQWSAFSLQVPFPVCCWIDDTCQRPAWAGGPRATRSLQSPHSASKNPTETQKAREAALAQDPGPGVHGSGAFLIPYVIALVFEGIPLFHVELAIGQRLRRGSIGVWRAISPYLGGVGLGCFTVSLLVSLYYNTILAWVLWYLLNSFQHPLPWSTCPLDLNRTGLVQECQDTSPVTYFWYRQTLNITPDINDSGAVQGRLLLCMAASWAVVYLCVIRGIETAGKAIYFTALFPYVVLSVFLVRGLTLPGATEGLLHLFTPDMQVLRNPRVWLDAATQIFFSLSLAFGGHIAFASYNPPRNHCERDAVTIALVNSMTSLYASIAVFSVLGFKAANDHGRCLDGNILLLLNAFDLPDQSVSRDDYAAVLSHLNATQPERVARLPLQVCHLEDFLDKSASGTGLAFIVFAEAVLHMPGAPVWAVLFFGMLFSLGLSSMFGNMESILTPLFDQWVRPRRVPKEVLTGLVCLACFLLASGFTLQSGNYWLEIFDQHAASLNLIFLAFFEVVGVIYVYGMKRFCDDVAWMTGRRPGLYWQVTWKVVSPLLLLTILVAYLALLASRPPSYRAWNPQHVGATRAQSPFAVAIGTLRAM", "length": 653, "header": "tr|A0A8W4FJT1-1|A0A287BF36_PIG Computationally mapped isoform of Transporter OS=Sus scrofa OX=9823 GN=SLC6A18 PE=3 SV=1 CANONICAL=A0A287BF36-1" }, "locus": { "chromosome": "16", "start_pos": 79289282, "end_pos": 79279576, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105235.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105235.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079481.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079481.1" } ] } }, { "isoform_ac": "F1S028-1", "url": "https://www.uniprot.org/uniprotkb/F1S028/entry", "sequence": { "sequence": "MKSPTHGGDSSRLPNPSSQKRAAGMACAAGPDPPSASAEDERPQWDNKLQYLLSCVGFAVGLGNLWRFPYLCQTHGGGAFLIPYVIALVFEGIPLFHVELAIGQRLRRGSIGVWRAISPYLGGVGLGCFTVSLLVSLYYNTILAWVLWYLLNSFQHPLPWSTCPLDLNRTGLVQECQDTSPVTYFWYRQTLNITPDINDSGAVQGRLLLCMAASWAVVYLCVIRGIETAGKAIYFTALFPYVVLSVFLVRGLTLPGATEGLLHLFTPDMQVLRNPRVWLDAATQIFFSLSLAFGGHIAFASYNPPRNHCERDAVTIALVNSMTSLYASIAVFSVLGFKAANDHGRCLDGNILLLLNAFDLPDQSVSRDDYAAVLSHLNATQPERVARLPLQVCHLEDFLDKSASGTGLAFIVFAEAVLHMPGAPVWAVLFFGMLFSLGLSSMFGNMESILTPLFDQWVRPRRVPKEVLTGLVCLACFLLASGFTLQSGNYWLEIFDQHAASLNLIFLAFFEVVGVIYVYGMKRFCDDVAWMTGRRPGLYWQVTWKVVSPLLLLTILVAYLALLASRPPSYRAWNPQHEAFPSREEKPYQGWVQVACVLLSFLPSLWVPGVALAQLLAQRRQKQPSAPQDRRPELQGGGVC", "length": 640, "header": "tr|F1S028-1|A0A287BF36_PIG Computationally mapped isoform of Transporter OS=Sus scrofa OX=9823 GN=SLC6A18 PE=3 SV=3 CANONICAL=A0A287BF36-1" }, "locus": { "chromosome": "16", "start_pos": 79292470, "end_pos": 79278213, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018635.4", "url": "https://www.ensembl.org/id/ENSSSCT00000018635.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000018134.3", "url": "https://www.ensembl.org/id/ENSSSCP00000018134.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4F738", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F738" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2LZX3-1", "protein_name": "Transporter", "gene_name": "Slc6a18", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAQASGMDPLVDMEDERPKWDNKLQYLLSCIGFAVGLGNIWRFPYLCQTYGGGAFLIPYFIALVFEGIPLFYIELAIGQRLRRGSIGVWRTISPYLGGLGLGCFSVSFLISLYYNTVLLWVLWFFLNSFQYPLPWSTCPLDLNRTGFVQECQSSGTVSYFWYRQTLNITPDINNTGTIQWKLFLCLVACWATVYLCIIRGIESTGKAIYFTALFPYVVLTIFLVRGLTLPGATEGLTYLFTPNMKFLQNPRVWLDAATQIFFSLSLAFGGHIAFASYNPPRNNCEKDAVTIALVNSMTSVYASITIFSIMGFKATNDYWRCLDRNILSLTNEFDFPELSISRDEYPEVLMYLNATQADRLAQLPLKTCHLEDFLDKSASGPGLAFIVFTEAVLHMPGASVWSVLFFGMLFTLGLSSMFGNMESVITPLFDMGILPRSIPKEGMTGMVCLVCFLSAICFTLQSGSYWLEIFDSFAASLNLIIFAFLEVVGVIYVYGMKRFCDDIEWMTGRRPSLYWQVTWKVVSPMLLFSIFLSYIILLSQTPPSYKAWNPQYEHFPSREEKLYPGWVQVTCILLSFLPSLWVPSVALAHLLYQHRQRWKDTHPESGLKPQESRSC", "length": 615 }, "evidence": [ { "id": "A0A287BF36", "url": "https://omabrowser.org/oma/group/A0A287BF36/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "E1BHC0-1", "protein_name": "Transporter", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MARTPGPDQPVDGGGEERPAWDNKLQYLLSCVGFAVGLGNLWRFPYLCQTHGGGAFLIPYIIALAFEGIPLFHIELAVGQRLRRGSVGAWTAISPYLGGMGLGCFTVSFLVSLYYNTVLTWVLWYLLNSFQHPLPWSACPLDLNRTGLVQECRDSSPVSYFWYRRTLNVSADIGDSGPVQWRLLVCLAVSWAVVYLCVIRGIETTGKAIYFTALFPYLVLTVFLVRGLTLPGAMQGLTYLFTPDLRVLQNPRVWLDAATQIFFSLSLALGGHIAFASYNPPRNNCRRDAVSIALVNSMTSLYASIAVFSVLGFKAASDHGRCLDRNILHLINAFDLPEQSVSRDTYTAALARLNASQPAQVAGLPLEACRLEDFLDKSASGTGLAFIVFTEAVLHMPGAPVWAVLFFGMLFSLGLSSMFGNMESIITPLLDLGVMPRRVPKEMLTGLACLLCFFTATCFTLRSGSYWLEIFDQYAAALNLILLAFFEVVGVAYVYGMKRFCDDIAWMTGRRPGFYWRATWKVVSPLLLLTIFLAYVALLASSPPHYKAWNPRYERFPLRQEKPYPGWVLAACVLLSFLPTLWVPVVALGQLLAQCRQKTRDPPQDRCPKPRGGRAC", "length": 616 }, "evidence": [ { "id": "A0A287BF36", "url": "https://omabrowser.org/oma/group/A0A287BF36/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "O88576-1", "protein_name": "Sodium-dependent neutral amino acid transporter B(0)AT3", "gene_name": "Slc6a18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAQASGMDPLVDIEDERPKWDNKLQYLLSCIGFAVGLGNIWRFPYLCQTHGGGAFLIPYFIALVFEGIPLFYIELAIGQRLRRGSIGVWKTISPYLGGVGLGCFSVSFLVSLYYNTVLLWVLWFFLNSFQHPLPWSTCPLDLNRTGFVQECQSSGTVSYFWYRQTLNITSDISNTGTIQWKLFLCLVACWSTVYLCVIRGIESTGKVIYFTALFPYLVLTIFLIRGLTLPGATEGLIYLFTPNMKTLQNPRVWLDAATQIFFSLSLAFGGHIAFASYNPPRNNCEKDAVIIALVNSMTSLYASIAIFSVMGFKASNDYGRCLDRNILSLINEFDLPELSISRDEYPSVLMYLNATQTARVAQLPLKTCHLEDFLDKSASGPGLAFIVFTEAVLHMPGASVWSVLFFGMLFTLGLSSMFGNMEGVITPLLDMGILPKGIPKEVMTGVICFACFLSAICFTLQSGGYWLEIFDSFAASLNLIIFAFMEVVGVIHIYGMKRFCDDIEWMTGRRPGLYWQVTWRVVSPMLLFGIFLSYIVLLIQTPPSYKAWNPQYEHFPSREEKFYPGWVQVTCVLLSFLPSLWVPGVALAQLLSQYKQRWKATHLESGLKLQESRGC", "length": 615 }, "evidence": [ { "id": "A0A287BF36", "url": "https://omabrowser.org/oma/group/A0A287BF36/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q62687-1", "protein_name": "Sodium-dependent neutral amino acid transporter B(0)AT3", "gene_name": "Slc6a18", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQASGMDPLVDIEDERPKWDNKLQYLLSCIGFAVGLGNIWRFPYLCHTHGGGAFLIPYFIALVFEGIPLFYIELAIGQRLRRGSIGVWKTISPYLGGVGLGCFSVSFLVSLYYNTILLWVLWFFLNSFQHPLPWSTCPLDLNRTGFVQECQSSGTVSYFWYRQTLNITSDISNTGTIQWKLFLCLVACWTTVYLCVIRGIESTGKVIYFTALFPYLVLTIFLIRGLTLPGATEGLTYLFTPNMKILQNSRVWLDAATQIFFSLSLAFGGHIAFASYNQPRNNCEKDAVTIALVNSMTSLYASITIFSIMGFKASNDYGRCLDRNILSLINEFDFPELSISRDEYPSVLMYLNATQPERVARLPLKTCHLEDFLDKSASGPGLAFIVFTEAVLHMPGASVWSVLFFGMLFTLGLSSMFGNMEGVITPLFDMGILPKGVPKETMTGVVCFICFLSAICFTLQSGSYWLEIFDSFAASLNLIIFAFMEVVGVIHVYGIKRFCDDIEWMTGRRPSLYWQVTWRVVSPMLLFGIFLSYIVLLAQSSPSYKAWNPQYEHFPSREEKLYPGWVQVTCVLLSFLPSLWVPGIALAQLLFQYRQRWKNTHLESALKPQESRGC", "length": 615 }, "evidence": [ { "id": "A0A287BF36", "url": "https://omabrowser.org/oma/group/A0A287BF36/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q96N87-1", "protein_name": "Inactive sodium-dependent neutral amino acid transporter B(0)AT3", "gene_name": "SLC6A18", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAHAPEPDPAACDLGDERPKWDNKAQYLLSCTGFAVGLGNIWRFPYLCQTYGGGAFLIPYVIALVFEGIPIFHVELAIGQRLRKGSVGVWTAISPYLSGVGLGCVTLSFLISLYYNTIVAWVLWYLLNSFQHPLPWSSCPPDLNRTGFVEECQGSSAVSYFWYRQTLNITADINDSGSIQWWLLICLAASWAVVYMCVIRGIETTGKVIYFTALFPYLVLTIFLIRGLTLPGATKGLIYLFTPNMHILQNPRVWLDAATQIFFSLSLAFGGHIAFASYNSPRNDCQKDAVVIALVNRMTSLYASIAVFSVLGFKATNDYEHCLDRNILSLINDFDFPEQSISRDDYPAVLMHLNATWPKRVAQLPLKACLLEDFLDKSASGPGLAFVVFTETDLHMPGAPVWAMLFFGMLFTLGLSTMFGTVEAVITPLLDVGVLPRWVPKEALTGLVCLVCFLSATCFTLQSGNYWLEIFDNFAASPNLLMLAFLEVVGVVYVYGMKRFCDDIAWMTGRRPSPYWRLTWRVVSPLLLTIFVAYIILLFWKPLRYKAWNPKYELFPSRQEKLYPGWARAACVLLSLLPVLWVPVAALAQLLTRRRRTWRDRDARPDTDMRPDTDTRPDTDMRPDTDMR", "length": 628 }, "evidence": [ { "id": "A0A287BF36", "url": "https://omabrowser.org/oma/group/A0A287BF36/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF36", "url": "https://www.uniprot.org/uniprotkb/A0A287BF36" } ], "pmid": "" }, { "name": "brush border membrane", "id": "GO:0031526", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031526", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF36", "url": "https://www.uniprot.org/uniprotkb/A0A287BF36" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF36", "url": "https://www.uniprot.org/uniprotkb/A0A287BF36" } ], "pmid": "" }, { "name": "symporter activity", "id": "GO:0015293", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015293", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF36", "url": "https://www.uniprot.org/uniprotkb/A0A287BF36" } ], "pmid": "" }, { "name": "neutral L-amino acid:sodium:chloride symporter activity", "id": "GO:0140931", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140931", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF36", "url": "https://www.uniprot.org/uniprotkb/A0A287BF36" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "amino acid transport", "id": "GO:0006865", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006865", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF36", "url": "https://www.uniprot.org/uniprotkb/A0A287BF36" } ], "pmid": "" }, { "name": "sodium ion transmembrane transport", "id": "GO:0035725", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035725", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF36", "url": "https://www.uniprot.org/uniprotkb/A0A287BF36" } ], "pmid": "" }, { "name": "renal amino acid absorption", "id": "GO:1990297", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990297", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF36", "url": "https://www.uniprot.org/uniprotkb/A0A287BF36" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 144, "end_pos": 146, "annotation": "n_glycosylation_sequon" }, { "start_pos": 168, "end_pos": 170, "annotation": "n_glycosylation_sequon" }, { "start_pos": 174, "end_pos": 176, "annotation": "n_glycosylation_sequon" }, { "start_pos": 354, "end_pos": 356, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287BF36-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 610, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287BF36-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287BF36" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 144, "end_pos": 146 }, { "start_pos": 168, "end_pos": 170 }, { "start_pos": 174, "end_pos": 176 }, { "start_pos": 354, "end_pos": 356 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", 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{ "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B8M9-1", "uniprot_ac": "A0A287B8M9", "uniprot_id": "A0A287B8M9_PIG", "mass": { "chemical_mass": 42298.0, "monoisotopic_mass": 42298.0 }, "refseq": { "ac": "NP_001231114", "name": "peroxisomal biogenesis factor 3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231114" }, "gene_names": [ { "name": "PEX3", "type": "recommended", "evidence": [ { "id": "A0A287B8M9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B8M9" } ] }, { "name": "PEX3", "type": "synonym", "evidence": [ { "id": "NP_001231114", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231114" } ] } ], "protein_names": [ { "name": "Peroxisomal biogenesis factor 3", "type": "recommended", "evidence": [ { "id": "A0A287B8M9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B8M9/entry#names_and_taxonomy" } ] }, { "name": "Peroxisomal assembly protein PEX3", "type": "synonym", "evidence": [ { "id": "A0A287B8M9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B8M9/entry#names_and_taxonomy" } ] }, { "name": "peroxisomal biogenesis factor 3", "type": "synonym", "evidence": [ { "id": "NP_001231114", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231114" } ] } ], "function": [ { "annotation": "Involved in peroxisome biosynthesis and integrity. Assembles membrane vesicles before the matrix proteins are translocated. As a docking factor for PEX19, is necessary for the import of peroxisomal membrane proteins in the peroxisomes.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D0VWG7", "url": "https://www.uniprot.org/uniprotkb/A0A8D0VWG7#function" }, { "database": "UniProtKB", "id": "ARBA00025338", "url": "https://www.uniprot.org/uniprotkb/ARBA00025338#function" }, { "database": "UniProtKB", "id": "A0A287B530", "url": "https://www.uniprot.org/uniprotkb/A0A287B530#function" }, { "database": "UniProtKB", "id": "A0A287B8M9", "url": "https://www.uniprot.org/uniprotkb/A0A287B8M9#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B8M9", "url": "https://www.uniprot.org/uniprotkb/A0A287B8M9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PEX3", "url": "https://www.uniprot.org/uniprotkb/A0A287B8M9", "locus": { "chromosome": "1", "start_pos": 21766000, "end_pos": 21802182, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004134", "url": "https://www.ensembl.org/id/ENSSSCG00000004134" } ] } } ], "crossref": [ { "id": "ENSSSCG00000004134", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004134", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100153726", "url": "https://www.ncbi.nlm.nih.gov/gene/100153726", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006966", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006966", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100153726", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100153726", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HRGWKDL", "url": "https://omabrowser.org/oma/group/HRGWKDL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287B530", "url": "https://www.orthodb.org/?gene=A0A287B530", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A287B8M9", "url": "https://www.orthodb.org/?gene=A0A287B8M9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR28080", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28080", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR28080:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28080:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04882", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04882", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-1369062", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1369062", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9603798", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9603798", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "NP_001231114", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231114", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B530", "url": "https://www.uniprot.org/uniprotkb/A0A287B530", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B530-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B530-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B8M9", "url": "https://www.uniprot.org/uniprotkb/A0A287B8M9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B8M9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B8M9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0VWG7", "url": "https://www.uniprot.org/uniprotkb/A0A8D0VWG7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0VWG7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0VWG7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLRSTWNFLKRHKKKCIFLGTVLGGIYILGKYGQKKIREIQEREAAEYIAQARRQYHFESNQRTCNMTVLSMLPTLREALMQQLNSESLTVLLKNRPSNKLEIWEDLKIISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNGTTVLAPPDVQQQYLSSIQHLLGDGLTELITVIKQSVQKILGSVSLKHSLSLLDLEQKLKEIRDLVEQHKSSSWINKDGSRSLLCHYMMPDEETPLAVQACGLSPRDVTTIKLLNETRDMLESPDFSTVLNICLNRGFSRLLDNMAEFFRPTEQDLQHGNSRNSLSSVSLPLAKIIPIINGQIHSVCSETPSHFVQDLLMMEQVKDFAANVYEAFSTPQQLEK", "length": 373, "header": "tr|A0A287B8M9-1|A0A287B8M9_PIG Isoform 1 of Peroxisomal biogenesis factor 3 OS=Sus scrofa OX=9823 GN=PEX3 PE=4 SV=1 CANONICAL=A0A287B8M9-1" }, "isoforms": [ { "isoform_ac": "A0A287B530-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B530/entry", "sequence": { "sequence": "MLRSTWNFLKRHKKKCIFLGTVLGGIYILGKYGQKKIREIQEREAAEYIAQARRQYHFESNQRTCNMTVLSMLPTLREALMQQLNSESLTVLLKNRPSNKLEIWEDLKIISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNGTTVLAPPDVQQQYLSSIQHLLGDGLTELITVIKQSVQKILGSVSLKHSLSLLDLEQKLKEIRDLVEQHKSSSWINKDGSRSLLCHYMMPDEETPLAVQACGLSPRDVTTIKLLNETRDMLESPDFSTVLNICLNRGFSRLLDNMAEFFRPTEQDLQHGNSRNSLSSVSLPLAKIIPIINGQIHSVCSETPSHFVQRY", "length": 348, "header": "tr|A0A287B530-1|A0A287B8M9_PIG Computationally mapped isoform of Peroxisomal biogenesis factor 3 OS=Sus scrofa OX=9823 GN=PEX3 PE=4 SV=2 CANONICAL=A0A287B8M9-1" }, "locus": { "chromosome": "1", "start_pos": 21801375, "end_pos": 21766460, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046873.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046873.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051546.2", "url": "https://www.ensembl.org/id/ENSSSCP00000051546.2" } ] } }, { "isoform_ac": "A0A287B8M9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B8M9/entry", "sequence": { "sequence": "MLRSTWNFLKRHKKKCIFLGTVLGGIYILGKYGQKKIREIQEREAAEYIAQARRQYHFESNQRTCNMTVLSMLPTLREALMQQLNSESLTVLLKNRPSNKLEIWEDLKIISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNGTTVLAPPDVQQQYLSSIQHLLGDGLTELITVIKQSVQKILGSVSLKHSLSLLDLEQKLKEIRDLVEQHKSSSWINKDGSRSLLCHYMMPDEETPLAVQACGLSPRDVTTIKLLNETRDMLESPDFSTVLNICLNRGFSRLLDNMAEFFRPTEQDLQHGNSRNSLSSVSLPLAKIIPIINGQIHSVCSETPSHFVQDLLMMEQVKDFAANVYEAFSTPQQLEK", "length": 373, "header": "tr|A0A287B8M9-1|A0A287B8M9_PIG Isoform 1 of Peroxisomal biogenesis factor 3 OS=Sus scrofa OX=9823 GN=PEX3 PE=4 SV=1 CANONICAL=A0A287B8M9-1" }, "locus": { "chromosome": "1", "start_pos": 21801375, "end_pos": 21767773, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050406.3", "url": "https://www.ensembl.org/id/ENSSSCT00000050406.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052437.1", "url": "https://www.ensembl.org/id/ENSSSCP00000052437.1" } ] } }, { "isoform_ac": "A0A8D0VWG7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0VWG7/entry", "sequence": { "sequence": "MHLPGDGPRRQQVRCQVRCIDDPELHALGIYILGKYGQKKIREIQEREAAEYIAQARRQYHFESNQRTCNMTVLSMLPTLREALMQQLNSESLTVLLKNRPSNKLEIWEDLKIISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNGTTVLAPPDVQQQYLSSIQHLLGDGLTELITVIKQSVQKILGSVSLKHSLSLLDLEQKLKEIRDLVEQHKSSSWINKDGSRSLLCHYMMPDEETPLAVQACGLSPRDVTTIKLLNETRDMLESPDFSTVLNICLNRGFSRLLDNMAEFFRPTEQDLQHGNSRNSLSSVSLPLAKIIPIINGQIHSVCSETPSHFVQDLLMMEQVKDFAANVYEAFSTPQQLEK", "length": 377, "header": "tr|A0A8D0VWG7-1|A0A287B8M9_PIG Computationally mapped isoform of Peroxisomal biogenesis factor 3 OS=Sus scrofa OX=9823 GN=PEX3 PE=4 SV=1 CANONICAL=A0A287B8M9-1" }, "locus": { "chromosome": "1", "start_pos": 21801331, "end_pos": 21767773, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004569.5", "url": "https://www.ensembl.org/id/ENSSSCT00000004569.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004466.4", "url": "https://www.ensembl.org/id/ENSSSCP00000004466.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D0VWG7", "url": "https://www.uniprot.org/uniprotkb/A0A8D0VWG7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100153726", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100153726", "resource": "KEGG Pathway" }, { "id": "R-SSC-1369062", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1369062", "resource": "Reactome", "description": "ABC transporters in lipid homeostasis" }, { "id": "R-SSC-9603798", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9603798", "resource": "Reactome", "description": "Class I peroxisomal membrane protein import" } ], "orthologs": [ { "uniprot_canonical_ac": "E1BS88-1", "protein_name": "Peroxisomal biogenesis factor 3", "gene_name": "PEX3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLRSLWSFLKRHKKKCLVLGTFLGGVYLLGKYGQKKIREIQEREAAEYIAQARRQYHFESNQRTCNMTVLSMLPTLRDALMHQLNSESLTSLLKNRPANKLEIWEDLKIISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVCKNGTTPLAPPEVQQQYLSSIQHLLGDGLTELITIVKQAVHKVFGSISLKHALSLLELEQKLKEIRDVVEHRDSDQVAPYSPLCHYLMPDEENPLATQACGLTERDTATIKLLNETRDMLESPDFSTVLSTCLNRGFSQLLDNMAEFFRPTEQDFSQNGSVNSLSSVSLPLAKIIPIINGQIHSICSETPSHFVQDLLMMEQMKDFAANVYEAFSTPQQLEK", "length": 369 }, "evidence": [ { "id": "A0A287B8M9", "url": "https://omabrowser.org/oma/group/A0A287B8M9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3H6X1-1", "protein_name": "Peroxisomal biogenesis factor 3", "gene_name": "Pex3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLRSMWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQEREAAEYIAQARRQYHFESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNRPSNKLEIWEDLKIISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNATVGKNGTTVLAPPDVQQQYLSSIQHLLGDGLTELVTVIKQAVQRILGSVSLKHSLSLLDLEQKLKEIRILVEQHRSPSWIDKDVSKSSLCQYMMPDEETPLAAQAYGLSPRDITTIKLLNETRDMLESPDFSTVLNTCLNRGFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCSDTPSHFVQDLLMMEQVKDFAANVYEAFSTPQQLEK", "length": 373 }, "evidence": [ { "id": "A0A287B8M9", "url": "https://omabrowser.org/oma/group/A0A287B8M9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P56589-1", "protein_name": "Peroxisomal biogenesis factor 3", "gene_name": "PEX3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLRSVWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQEREAAEYIAQARRQYHFESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNRPSNKLEIWEDLKIISFTRSTVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNGTTILAPPDVQQQYLSSIQHLLGDGLTELITVIKQAVQKVLGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSSSWINKDGSKPLLCHYMMPDEETPLAVQACGLSPRDITTIKLLNETRDMLESPDFSTVLNTCLNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSETPSHFVQDLLTMEQVKDFAANVYEAFSTPQQLEK", "length": 373 }, "evidence": [ { "id": "A0A287B8M9", "url": "https://omabrowser.org/oma/group/A0A287B8M9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9JJK4-1", "protein_name": "Peroxisomal biogenesis factor 3", "gene_name": "Pex3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLRSMWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKLREIQEREAAEYIAQARRQYHFESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNRPSNKLEIWEDLKIISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNATVGKNGTSILAPPDVQQQYLSSIQHLLGDGLTELVTVIKQAVQRILGSISLKHSLSLLDLEQKLKEIRTLVEQHRSCWNDKDASKSSLCHYMMPDEETPLAAQAYGLSPRDITTIKLLNETRDMLESPDFSTVLNTCLNRGFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCSETPSHFVQDLLMMEQVKDFAANVYEAFSTPQQLEK", "length": 372 }, "evidence": [ { "id": "A0A287B8M9", "url": "https://omabrowser.org/oma/group/A0A287B8M9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9QXY9-1", "protein_name": "Peroxisomal biogenesis factor 3", "gene_name": "Pex3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLRSMWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQEREAAEYIAQARRQYHFESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKSRPSNKLEIWEDLKIISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNATVGKNGTTVLAPPDVQQQYLSSIQHLLGDGLTELVTVIKQAVQRILGSVSLKHSLSLLDLEQKLKEIRILVEQHQSSWNDKDVSRSSLCQYMMPDEETPLAAQAYGLSHRDITTIKLLNETRDMLESPDFSTVLNTCLNRGFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCSETPSHFVQDLLMMEQVKDFAANVYEAFSTPQQLEK", "length": 372 }, "evidence": [ { "id": "A0A287B8M9", "url": "https://omabrowser.org/oma/group/A0A287B8M9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9VUL8-1", "protein_name": "Peroxisomal biogenesis factor 3", "gene_name": "Pex3", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MLSRLQDFLSRHRRKFIVTGVLVGGTIFAARYAQRRFVEFQEKQAREFFERTRRTTHFESTEKTCNQVILGMGEEMCQAVLRECSTDELLEQLRQNPKNKLELWEDMKIVAFTRLATYVYASSMLVIALRVQLNLLGGYIYRDIMTEQKQVTDELKQQYLSLIRHFITDSGIRDLARYIRTQVIAVTKTIPLSEQLSLSDLEQLFWSLQMAINADTRRDPNSRMSKYLLPSQNPSHSPLLQKMVNETLDLLESEDAVGVCSHNVSRGFVLACDAIAESMGETLQHLPQAKVQTQQEQSVKFNQAGSLGASTSKSQNGLENNNLLNINRVLLALAKLIPIISGLTSRGFDTTSRPHNLPTQLLTFYVVAEKTKTLGANVYESFSSA", "length": 385 }, "evidence": [ { "id": "A0A287B8M9", "url": "https://omabrowser.org/oma/group/A0A287B8M9/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "peroxisomal membrane", "id": "GO:0005778", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005778", "evidence": [ { "database": "UniProtKB", "id": "A0A287B8M9", "url": "https://www.uniprot.org/uniprotkb/A0A287B8M9" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": 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"name": "Biological Process", "total": 2, "go_terms": [ { "name": "protein import into peroxisome membrane", "id": "GO:0045046", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045046", "evidence": [ { "database": "UniProtKB", "id": "A0A287B8M9", "url": "https://www.uniprot.org/uniprotkb/A0A287B8M9" } ], "pmid": "" }, { "name": "peroxisome organization", "id": "GO:0007031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007031", "evidence": [ { "database": "UniProtKB", "id": "A0A287B8M9", "url": "https://www.uniprot.org/uniprotkb/A0A287B8M9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 150, "end_pos": 152, "annotation": "n_glycosylation_sequon" }, { "start_pos": 265, "end_pos": 267, "annotation": "n_glycosylation_sequon" }, { "start_pos": 66, "end_pos": 68, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], 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"UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK8" } ] } ], "protein_names": [ { "name": "ubiquitinyl hydrolase 1", "type": "recommended", "evidence": [ { "id": "A0A287BBK8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK8/entry#names_and_taxonomy" } ] }, { "name": "3.4.19.12", "type": "synonym", "evidence": [ { "id": "A0A287BBK8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK8/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4F661", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F661#function" }, { "database": "UniProtKB", "id": "RU366025", "url": "https://www.uniprot.org/uniprotkb/RU366025#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BBK8", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "USP42", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK8", "locus": { "chromosome": "3", "start_pos": 5006241, "end_pos": 5048282, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000032705", "url": "https://www.ensembl.org/id/ENSSSCG00000032705" } ] } } ], "crossref": [ { "id": "ENSSSCG00000032705", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000032705", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd02661", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd02661", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001394", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001394", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018200", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018200", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR028889", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028889", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038765", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038765", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050164", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050164", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24006", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24006", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24006:SF727", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24006:SF727", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00443", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00443", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-5689880", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5689880", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287BBK8", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BBK8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F661", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F661", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F661-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F661-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F8A9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F8A9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F8A9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F8A9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FNV6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FNV6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FNV6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FNV6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTIVDKASESSDPSTYQNQPGSSEAVSPGDMDAGSASWGAVSSLNDVSNHTLSLGPVPGAVVYSSSTVPEKSKPSPQKDQALGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGDLTHSAHSPGQSSPRPVLSQRVVSSKQAASGFIGPQLPSHMIKNPPHLNGTGPGPLKETPSSSMSGPHGSAAANRAAPVTASTPVPNWSVGRPSVLPDHPKKQKITISIHNKLPVRQGPPQPDPHGGSPEGPAKPAPAATATAPSALQSTSRAAPPPAAGRAAKQLGPPEACSKPVMNGKSRLSSSLLVPYGAESSEESDEEAKGLGKENGLGPAESARSPAPPDATAAEAPPHELLELPVALNGAPSTDSDPKENGLPSDGAGCPVQPALHPENPFSKANGLPAKLMPAPLPPLPEDRVLETFKLSTRAQGSADETSSPGAEESPAEEPAAELAAGSPAPDAPENPETVASLSSTSKKASPPSEPSINSTKEASENSAAKPEAPLPSSSSSLCTVSKSPGGDDARAQLADPASSSTHGPSKPSRDAEGLVTERPPDSAAAEAAGRLSPSPSERSEDPREPELSALSREGGAAAEAPASAGLPAGEAPPPPPQPSDPRAERLAETGPEQSGGDRAAESAASPKAQAPSPVPAPVPEKISSLRKVDRGHYRSRRDRSSSGERARGSRSRTEEQHRRKRPRPERPERPRPDPCGPAPHHPAHGGERLSLARYGHHHSRSRGGSEQEWGRYHHAESEHAWAREKYYPDRTRWAKCRHHHDRYAPYPARELRDWKPFHADREYERAGPYGSRPYKDHYRSRKGYELAAKDKERHRFPGPRAGPSHALPPPPPPHPHPHPHPERFGPEKAALGAEDSGCHLAGRFHEHENVKSRKRRYESLENADGHVEKKAWRSFQKGPLEEPKVKKHKKSKKKKKSKDKHRDRDSRHQPDSDLSGAHSEADLHRHKKKKKKKKRHSRKSADFVRAADAPLPKAASCQTVDRFRRAAGAFPLPDGLPLEGAGPFREKTKHLRMESRADRCHLSECGQGKRAPLQAGARNSLEKAQAAQGAEEA", "length": 1368, "header": "tr|A0A287BBK8-1|A0A287BBK8_PIG Isoform 1 of ubiquitinyl hydrolase 1 OS=Sus scrofa OX=9823 GN=USP42 PE=3 SV=2 CANONICAL=A0A287BBK8-1" }, "isoforms": [ { "isoform_ac": "A0A287BBK8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK8/entry", "sequence": { "sequence": "MTIVDKASESSDPSTYQNQPGSSEAVSPGDMDAGSASWGAVSSLNDVSNHTLSLGPVPGAVVYSSSTVPEKSKPSPQKDQALGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGDLTHSAHSPGQSSPRPVLSQRVVSSKQAASGFIGPQLPSHMIKNPPHLNGTGPGPLKETPSSSMSGPHGSAAANRAAPVTASTPVPNWSVGRPSVLPDHPKKQKITISIHNKLPVRQGPPQPDPHGGSPEGPAKPAPAATATAPSALQSTSRAAPPPAAGRAAKQLGPPEACSKPVMNGKSRLSSSLLVPYGAESSEESDEEAKGLGKENGLGPAESARSPAPPDATAAEAPPHELLELPVALNGAPSTDSDPKENGLPSDGAGCPVQPALHPENPFSKANGLPAKLMPAPLPPLPEDRVLETFKLSTRAQGSADETSSPGAEESPAEEPAAELAAGSPAPDAPENPETVASLSSTSKKASPPSEPSINSTKEASENSAAKPEAPLPSSSSSLCTVSKSPGGDDARAQLADPASSSTHGPSKPSRDAEGLVTERPPDSAAAEAAGRLSPSPSERSEDPREPELSALSREGGAAAEAPASAGLPAGEAPPPPPQPSDPRAERLAETGPEQSGGDRAAESAASPKAQAPSPVPAPVPEKISSLRKVDRGHYRSRRDRSSSGERARGSRSRTEEQHRRKRPRPERPERPRPDPCGPAPHHPAHGGERLSLARYGHHHSRSRGGSEQEWGRYHHAESEHAWAREKYYPDRTRWAKCRHHHDRYAPYPARELRDWKPFHADREYERAGPYGSRPYKDHYRSRKGYELAAKDKERHRFPGPRAGPSHALPPPPPPHPHPHPHPERFGPEKAALGAEDSGCHLAGRFHEHENVKSRKRRYESLENADGHVEKKAWRSFQKGPLEEPKVKKHKKSKKKKKSKDKHRDRDSRHQPDSDLSGAHSEADLHRHKKKKKKKKRHSRKSADFVRAADAPLPKAASCQTVDRFRRAAGAFPLPDGLPLEGAGPFREKTKHLRMESRADRCHLSECGQGKRAPLQAGARNSLEKAQAAQGAEEA", "length": 1368, "header": "tr|A0A287BBK8-1|A0A287BBK8_PIG Isoform 1 of ubiquitinyl hydrolase 1 OS=Sus scrofa OX=9823 GN=USP42 PE=3 SV=2 CANONICAL=A0A287BBK8-1" }, "locus": { "chromosome": "3", "start_pos": 5044075, "end_pos": 5006244, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061262.3", "url": "https://www.ensembl.org/id/ENSSSCT00000061262.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053460.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053460.2" } ] } }, { "isoform_ac": "A0A8W4F661-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F661/entry", "sequence": { "sequence": "MTIVDKASESSDPSTYQNQPGSSEAVSPGDMDAGSASWGAVSSLNDVSNHTLSLGPVPGAVVYSSSTVPEKSKPSPQKDQALGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGDLTHSAHSPGQSSPRPVLSQRVVSSKQAASGFIGPQLPSHMIKNPPHLNGTGPGPLKETPSSSMSGPHGSAAANRAAPVTASTPVPNWSVGRPSVLPDHPKKQKITISIHNKLPVRQGPPQPDPHGGSPEGPAKPAPAATATAPSALQSTSRAAPPPAAGRAAKQLGPPEACSKPVMNGKSRLSSSLLVPYGAESSEESDEEAKGLGKENGLGPAESARSPAPPDATAAEAPPHELLELPVALNGAPSTDSDPKENGLPSDGAGCPVQPALHPENPFSKANGLPAKVSAGRLMAPPDP", "length": 717, "header": "tr|A0A8W4F661-1|A0A287BBK8_PIG Computationally mapped isoform of ubiquitinyl hydrolase 1 OS=Sus scrofa OX=9823 GN=USP42 PE=3 SV=1 CANONICAL=A0A287BBK8-1" }, "locus": { "chromosome": "3", "start_pos": 5044075, "end_pos": 5012198, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000094691.1", "url": "https://www.ensembl.org/id/ENSSSCT00000094691.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074636.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074636.1" } ] } }, { "isoform_ac": "A0A8W4F8A9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F8A9/entry", "sequence": { "sequence": "MTIVDKASESSDPSTYQNQPGSSEAVSPGDMDAGSASWGAVSSLNDVSNHTLSLGPVPGAVVYSSSTVPEKSKPSPQKDQALGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGDLTHSAHSPGQSSPRPVLSQRVVSSKQAASGFIGPQLPSHMIKNPPHLNGTGPGPLKETPSSSMSGPHGSAAANRAAPVTASTPVPNWSVGRPSVLPDHPKKQKITISIHNKLPVRQGPPQPDPHGGSPEGPAKPAPAATATAPSALQSTSRAAPPPAAGRAAKQLGPPEACSKPVMNGKSRLSSSLLVPYGAESSEESDEEAKGLGKENGLGPAESARSPAPPDATAAEAPPHELLELPVALNGAPSTDSDPKENGLPSDGAGCPVQPALHPENPFSKANGLPAKLMPAPLPPLPEDRVLETFKLSTRAQGSADETRARWTLDVSLPAPDAPENPETVASLSSTSKKASPPSEPSINSTKEASENSAAKPEAPLPSSSSSLCTVSKSPGGDDARAQLADPASSSTHGPSKPSRDAEGLVTERPPDSAAAEAAGRLSPSPSERSEDPREPELSALSREGGAAAEAPASAGLPAGEAPPPPPQPSDPRAERLAETGPEQSGGDRAAESAASPKAQAPSPVPAPVPEKISSLRKVDRGHYRSRRDRSSSGERARGSRSRTEEQHRRKRPRPERPERPRPDPCGPAPHHPAHGGERLSLARYGHHHSRSRGGSEQEWGRYHHAESEHAWAREKYYPDRTRWAKCRHHHDRYAPYPARELRDWKPFHADREYERAGPYGSRPYKDHYRSRKGYELAAKDKERHRFPGPRAGPSHALPPPPFGPEKAALGAEDSGCHLAGRFHEHENVKSRKRRYESLENADGHVEKKAWRSFQKGPLEEPKVKKHKKSKKKKKSKDKHRDRDSRHQPDSDLSGAHSEADLHRHKKKKKKKKRHSRKSADFVRAADAPLPKAASCQTVDRFRRAAGAFPLPDGLPLEGAGPFREKTKHLRMESRADRCHLSECGQGKRAPLQAGARNSLEKAQAAQGAEEA", "length": 1345, "header": "tr|A0A8W4F8A9-1|A0A287BBK8_PIG Computationally mapped isoform of ubiquitinyl hydrolase 1 OS=Sus scrofa OX=9823 GN=USP42 PE=3 SV=1 CANONICAL=A0A287BBK8-1" }, "locus": { "chromosome": "3", "start_pos": 5044075, "end_pos": 5006244, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000097719.1", "url": "https://www.ensembl.org/id/ENSSSCT00000097719.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075542.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075542.1" } ] } }, { "isoform_ac": "A0A8W4FNV6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FNV6/entry", "sequence": { "sequence": "MTIVDKASESSDPSTYQNQPGSSEAVSPGDMDAGSASWGAVSSLNDVSNHTLSLGPVPGAVVYSSSTVPEKSKPSPQKDQALGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGDLTHSAHSPGQSSPRPVLSQRVVSSKQAASGFIGPQLPSHMIKNPPHLNGTGPGPLKETPSSSMSGPHGSAAANRAAPVTASTPVPNWSVGRPSVLPDHPKKQKITISIHNKLPVRQGPPQPDPHGGSPEGPAKPAPAATATAPSALQSTSRAAPPPAAGRAAKQLGPPEACSKPVMNGKSRLSSSLLVPYGAESSEESDEEAKGLGKENGLGPAESARSPAPPDATAAEAPPHELLELPVALNGAPSTDSDPKENGLPSDGAGCPVQPALHPENPFSKANGLPAKLMPAPLPPLPEDRVLETFKLSTRAQGSADETSSPGAEESPAEEPAAELAAGSPAPDAPENPETVASLSSTSKKASPPSEPSINSTKEASENSAAKPEAPLPSSSSSLCTVSKSPGGDDARAQLADPASSSTHGPSKPSRDAEGLVTERPPDSAAAEAAGRLSPSPSERSEDPREPELSALSREGGAAAEAPASAGLPAGEAPPPPPQPSDPRAERLAETGPEQSGGDRAAESAASPKAQAPSPVPAPVPEKISSLRKVDRGHYRSRRDRSSSGERARGSRSRTEEQHRRKRPRPERPERPRPDPCGPAPHHPAHGGERLSLARYGHHHSRSRGGSEQEWGRYHHAESEHAWAREKYYPDRTRWAKCRHHHDRYAPYPARELRDWKPFHADREYERAGPYGSRPYKDHYRSRKGYELAAKDKERHRFPGPRAGPSHALPPPPFGPEKAALGAEDSGCHLAGRFHEHENVKSRKRRYESLENADGHVEKKAWRSFQKGPLEEPKVKKHKKSKKKKKSKDKHRDRDSRHQPDSDLSGAHSEADLHRHKKKKKKKKRHSRKSADFVRAADAPLPKAASCQTVDRFRRAAGAFPLPDGLPLEGAGPFREKTKHLRMESRADRCHLSECGQGKRAPLQAGARNSLEKAQAAQGAEEA", "length": 1356, "header": "tr|A0A8W4FNV6-1|A0A287BBK8_PIG Computationally mapped isoform of ubiquitinyl hydrolase 1 OS=Sus scrofa OX=9823 GN=USP42 PE=3 SV=1 CANONICAL=A0A287BBK8-1" }, "locus": { "chromosome": "3", "start_pos": 5044075, "end_pos": 5006244, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000103062.1", "url": "https://www.ensembl.org/id/ENSSSCT00000103062.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080602.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080602.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4F661", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F661" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-5689880", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5689880", "resource": "Reactome", "description": "Ub-specific processing proteases" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBK8", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK8" } ], "pmid": "" }, { "name": "protein deubiquitination", "id": "GO:0016579", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016579", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBK8", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK8" } ], "pmid": "" }, { "name": "regulation of protein stability", "id": "GO:0031647", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031647", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBK8", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK8" } ], "pmid": "" }, { "name": "regulation of apoptotic process", "id": "GO:0042981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042981", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBK8", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "cysteine-type deubiquitinase activity", "id": "GO:0004843", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004843", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBK8", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBK8", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK8" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBK8", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 215, "end_pos": 217, "annotation": "n_glycosylation_sequon" }, { "start_pos": 322, "end_pos": 324, "annotation": "n_glycosylation_sequon" }, { "start_pos": 387, "end_pos": 389, "annotation": "n_glycosylation_sequon" }, { "start_pos": 468, "end_pos": 470, "annotation": "n_glycosylation_sequon" }, { "start_pos": 49, "end_pos": 51, "annotation": "n_glycosylation_sequon" }, { "start_pos": 506, "end_pos": 508, "annotation": "n_glycosylation_sequon" }, { "start_pos": 788, "end_pos": 790, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-5689973", "name": "USP10,USP24,USP42 deubiquitinate TP53", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5689973", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5689973" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287BBK8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK8" }, { "id": "PS50235", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50235" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "USP", "eco_id": "ECO_0000259", "start_pos": 111, "end_pos": 412, "start_aa": "Ala", "end_aa": "Ser", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } 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"MEGVELKEEWQDEDFPIPLPEDDSIEADVLAVTGPESQPGSLEVNGNKVRKKLMAPDISLTLDPSDGSVLSDDLDESGEIDLDGLDTPSEDSNEFEWEDDLPKPKTTEVIRKGSITEYTAAEEKEDGRRWRMFRIGEQDHRVDMKAIEPYKKVISHGGYYGDGLNAIVVFAVCFMPESGQPNYRYLMDNLFKYVIGTLELLVAENYMIVYLNGATTRRKMPSLGWLRKCYQQIDRRLRKNLKSLIIVHPSWFIRTLLAVTRPFISSKFSQKIRYVFNLAELAELVPMEYVGIPECIKQVDQELNGKQDEPKNEQ", "length": 314, "header": "tr|A0A287B984-1|A0A287B984_PIG Isoform 1 of BCL2 interacting protein 2 OS=Sus scrofa OX=9823 GN=BNIP2 PE=4 SV=3 CANONICAL=A0A287B984-1" }, "locus": { "chromosome": "1", "start_pos": 112364959, "end_pos": 112351952, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040315.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040315.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052637.3", "url": "https://www.ensembl.org/id/ENSSSCP00000052637.3" } ] } }, { "isoform_ac": "A0A5G2R6S2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6S2/entry", "sequence": { "sequence": "MEGVELKEEWQDEDFPIPLPEDDSIEADVLAVTGPESQPGSLEVNGNKVRKKLMAPDISLTLDPSDGSVLSDDLDESGEIDLDGLDTPSEDSNEFEWEDDLPKPKTTEVIRKGSITEYTAAEEKEDGRRWRMFRIGEQDHRVDMKAIEPYKKVISHGGYVSFVLLWVFLLCFLGHGMQILRRWIKCHCCVCCLFYA", "length": 196, "header": "tr|A0A5G2R6S2-1|A0A287B984_PIG Computationally mapped isoform of BCL2 interacting protein 2 OS=Sus scrofa OX=9823 GN=BNIP2 PE=4 SV=1 CANONICAL=A0A287B984-1" }, "locus": { "chromosome": "1", "start_pos": 112358780, "end_pos": 112351952, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084913.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084913.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072952.2", "url": "https://www.ensembl.org/id/ENSSSCP00000072952.2" } ] } }, { "isoform_ac": "A0A8D0WUQ7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0WUQ7/entry", "sequence": { "sequence": "MEGVELKEEWQDEDFPIPLPEDDSIEADVLAVTGPESQPGSLEVNGNKVRKKLMAPDISLTLDPSDGSVLSDDLDESGEIDLDGLDTPSEDSNEFEWEGYFPLTALSWKQLTYNDLPKPKTTEVIRKGSITEYTAAEEKEDGRRWRMFRIGEQDHRVDMKAIEPYKKVISHGGYYGDGLNAIVVFAVCFMPESGQPNYRYLMDNLFKYVIGTLELLVAENYMIVYLNGATTRRKMPSLGWLRKCYQQIDRRLRKNLKSLIIVHPSWFIRTLLAVTRPFISSKFSQKIRYVFNLAELAELVPMEYVGIPECIKQVDQELNGKQDEPKNEQ", "length": 329, "header": "tr|A0A8D0WUQ7-1|A0A287B984_PIG Computationally mapped isoform of BCL2 interacting protein 2 OS=Sus scrofa OX=9823 GN=BNIP2 PE=4 SV=1 CANONICAL=A0A287B984-1" }, "locus": { "chromosome": "1", "start_pos": 112364959, "end_pos": 112351952, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065435.2", "url": "https://www.ensembl.org/id/ENSSSCT00000065435.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045681.2", "url": "https://www.ensembl.org/id/ENSSSCP00000045681.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved 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"description": "Myogenesis" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "nuclear envelope", "id": "GO:0005635", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005635", "evidence": [ { "database": "UniProtKB", "id": "A0A287B984", "url": "https://www.uniprot.org/uniprotkb/A0A287B984" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A287B984", "url": "https://www.uniprot.org/uniprotkb/A0A287B984" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A287B984", "url": "https://www.uniprot.org/uniprotkb/A0A287B984" } ], "pmid": "" }, { "name": "centriole", "id": "GO:0005814", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005814", "evidence": [ { "database": "UniProtKB", "id": 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"title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B4Z4-1", "uniprot_ac": "A0A287B4Z4", "uniprot_id": "A0A287B4Z4_PIG", "mass": { "chemical_mass": 98331.0, "monoisotopic_mass": 98331.0 }, "refseq": {}, "gene_names": [ { "name": "EPB41L1", "type": "recommended", "evidence": [ { "id": "A0A287B4Z4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B4Z4" } ] } ], "protein_names": [ { "name": "Protein 4.1", "type": "recommended", "evidence": [ { "id": "A0A287B4Z4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B4Z4/entry#names_and_taxonomy" } ] }, { "name": "4.1R", "type": "synonym", "evidence": [ { "id": "A0A287B4Z4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B4Z4/entry#names_and_taxonomy" } ] }, { "name": "Band 4.1", "type": "synonym", "evidence": [ { "id": "A0A287B4Z4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B4Z4/entry#names_and_taxonomy" } ] }, { "name": "Erythrocyte membrane protein band 4.1", "type": "synonym", "evidence": [ { "id": "A0A287B4Z4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B4Z4/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Protein 4.1 is a major structural element of the erythrocyte membrane skeleton. It plays a key role in regulating membrane physical properties of mechanical stability and deformability by stabilizing spectrin-actin interaction. Recruits DLG1 to membranes. Required for dynein-dynactin complex and NUMA1 recruitment at the mitotic cell cortex during anaphase.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ88", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ88#function" }, { "database": "UniProtKB", "id": "ARBA00054563", "url": "https://www.uniprot.org/uniprotkb/ARBA00054563#function" }, { "database": "UniProtKB", "id": "A0A286ZPL1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPL1#function" }, { "database": "UniProtKB", "id": "A0A286ZY71", "url": "https://www.uniprot.org/uniprotkb/A0A286ZY71#function" }, { "database": "UniProtKB", "id": "A0A287AVU3", "url": "https://www.uniprot.org/uniprotkb/A0A287AVU3#function" }, { "database": "UniProtKB", "id": "A0A287A2U2", "url": "https://www.uniprot.org/uniprotkb/A0A287A2U2#function" }, { "database": "UniProtKB", "id": "A0A287ARK5", "url": "https://www.uniprot.org/uniprotkb/A0A287ARK5#function" }, { "database": "UniProtKB", "id": "A0A287B4Z4", "url": "https://www.uniprot.org/uniprotkb/A0A287B4Z4#function" }, { "database": "UniProtKB", "id": "A0A287BLI2", "url": "https://www.uniprot.org/uniprotkb/A0A287BLI2#function" }, { "database": "UniProtKB", "id": "F1S485", "url": "https://www.uniprot.org/uniprotkb/F1S485#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B4Z4", "url": "https://www.uniprot.org/uniprotkb/A0A287B4Z4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "EPB41L1", "url": "https://www.uniprot.org/uniprotkb/A0A287B4Z4", "locus": {} } ], "crossref": [ { "id": "A0A287B4Z4", "url": "https://alphafold.ebi.ac.uk/entry/A0A287B4Z4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000007314", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000007314", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd13184", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13184", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd14473", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd14473", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd17201", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd17201", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000299", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000299", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000798", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000798", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007477", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007477", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008379", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008379", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014352", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014352", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014847", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014847", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018979", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018979", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018980", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018980", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019747", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019747", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019748", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019748", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019749", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019749", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029071", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029071", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035963", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035963", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR23280", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23280", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23280:SF24", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23280:SF24", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00373", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00373", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF04382", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04382", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF05902", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05902", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08736", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08736", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF09379", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09379", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF09380", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09380", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-399719", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-399719", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-6794361", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6794361", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZJ88", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ88", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZJ88-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ88-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZPL1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPL1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZPL1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPL1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZY71", "url": "https://www.uniprot.org/uniprotkb/A0A286ZY71", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZY71-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZY71-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A2U2", "url": "https://www.uniprot.org/uniprotkb/A0A287A2U2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A2U2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A2U2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ARK5", "url": "https://www.uniprot.org/uniprotkb/A0A287ARK5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ARK5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ARK5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AVU3", "url": "https://www.uniprot.org/uniprotkb/A0A287AVU3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AVU3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AVU3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B4Z4", "url": "https://www.uniprot.org/uniprotkb/A0A287B4Z4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B4Z4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B4Z4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BJ38", "url": "https://www.uniprot.org/uniprotkb/A0A287BJ38", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BJ38-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BJ38-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BLI2", "url": "https://www.uniprot.org/uniprotkb/A0A287BLI2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BLI2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BLI2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S485", "url": "https://www.uniprot.org/uniprotkb/F1S485", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S485-1", "url": "https://www.uniprot.org/uniprotkb/F1S485-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTTETGPDSEVKKAQEEAPQQPEAAATATTPVTPAGHGHPEANSNEKHPPQQDARPAEQSLDMEEKDYGEADGLSERTTPSKAQKSPQKIAKKFKSAICRVTLLDASEYECEVEKHGRGQVLFDLVCEHLNLLEKDYFGLTFCDADSQKNWLDPSKEIKKQIRSSPWNFAFTVKFYPPDPAQLTEDITRYYLCLQLRADIITGRLPCSFVTHALLGSYAVQAELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGAEFSRPASVSENHDAGPDGDKREEDGESGGRRSEAEEGEVRTPTKIKELKPEQETTPRHKQEFLDKPEDVLLKHQASINELKRTLKEPNSKLIHRDRDWERERRLPSSPASPSPKGTPEKANERAGLREGSEEKVKPPRPRAPESDTGDEDQDQERDAVFLKDNHLAIERKCSSITVSSTSSLEAEVDFTVIGDYHGSAFEDFSRSLPELDRDKSDSETEGLVFSRDLNKGGPSQDDESGGLEDSPDRGACSTPDMPQFEPVKAETMTVSSLAIRKKIEPEAVLQTRVTNVDATQQVDGAAPGGKEFMATTPSITTETISTTMENSLKSGKGAAAMIPGPQTVATEIRSLSPIIGKDVLTSTYGATAETLSTSTTTHVTKTVKGGFSETRIEKRIIITGDEDVDQDQALALAIKEAKLQHPDMLVTKAVVYRETDPSPEERDKKPQES", "length": 881, "header": "tr|A0A287B4Z4-1|A0A287B4Z4_PIG Isoform 1 of Protein 4.1 OS=Sus scrofa OX=9823 GN=EPB41L1 PE=1 SV=3 CANONICAL=A0A287B4Z4-1" }, "isoforms": [ { "isoform_ac": "A0A286ZJ88-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ88/entry", "sequence": { "sequence": "MTTETGPDSEVKKAQEEAPQQPEAAATATTPVTPAGHGHPEANSNEKHPPQQDARPAEQSLDMEEKDYGEADGLSERTTPSKAQKSPQKIAKKFKSAICRVTLLDASEYECEVEKHGRGQVLFDLVCEHLNLLEKDYFGLTFCDADSQKNWLDPSKEIKKQIRSSPWNFAFTVKFYPPDPAQLTEDITRYYLCLQLRADIITGRLPCSFVTHALLGSYAVQAELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGAEFSRPASVSENHDAGPDGDKREEDGESGGRRSEAEEGEVRTPTKIKELKPEQETTPRHKQEFLDKPEDVLLKHQASINELKRTLKEPNSKLIHRDRDWERERRLPSSPASPSPKGTPEKANESRRTQDTSQQDLAPEPGTATGLEVFTQKSLAASPEGSEHWVFIEREYIRPEELSLLTVTTTQQEESEAGLADILADGRLSKVDILVDKFKVEVATEEMVGARRANTQQQGRMIASPEDFESVWEEGPWVREGPGGAPLPAGCTGAGKLLEGSQLRVDPGEATIWKPQVSGGQLEGPVVEPEEFQACGRPTAPGTRPAEVDVPSSASDTGGLQSFLLDPAHTEARADSSDETDTSLAERSFYLNYGEKDSEDQALPPPLEEREEHFDVPPGPDETRWKLSEELMESWELNSSGPQGSAATAGRNKAQEGEASSEEGAGLRRNHRPNDLEAIDQQLGKGPSPGPAFAGDWDQSRWGVEGEFTHPVSSVAAEEEAPKSGDLMGRAAKSPPAGWNHSPPRGGPVCPDPWAIAPSDDRKPAKPDRGNFLPKERGPVHTQMGEPAVEDSKTPVFLQMEAITPLQTSPRPFSAQSSPEEASPSSPPHGSGEPLQLRDPFGEESPLLLKHAHPPKESLEPKDQGGLVGTPDRGERWAPPVASRKPRAVPEEAEGLVFPSEKQKEMTTFQAGGKQGSLEDISKTSVANKIRIFETHGAETRRVSQGETRAFTELSSEASTGQVEQQRNKLLDLGFVQCQPLGDFAVPKATPSVMLSATRHFREGVSAPSPGEGLMDLELVSASPGRETALEEATGGTGHNKPGDAVRQEKHVTSLAANPPGKRVHLRFASPSVPQRAGLREGSEEKVKPPRPRAPESDTGDEDQDQERDAVFLKDNHLAIERKCSSITVSSTSSLEAEVDFTVIGDYHGSAFEDFSRSLPELDRDKSDSETEGLVFSRDLNKGGPSQDDESGGLEDSPDRGACSTPDMPQFEPVKAETMTVSSLAIRKKIEPEAVLQTRVTNVDATQVDGAAPGGKEFMATTPSITTETISTTMENSLKSGKGAAAMIPGPQTVATEIRSLSPIIGKDVLTSTYGATAETLSTSTTTHVTKTVKGGFSETRIEKRIIITGDEDVDQDQALALAIKEAKLQHPDMLVTKAVVYRETDPSPEERDKKPQVRLMRLSSQGMEETTEARSSQGHFPAKGPTERLEPQHSFDPPPSPRTFLESQLPQIPPVRVQRGRKTGSSVSLGFQAPDSEK", "length": 1686, "header": "tr|A0A286ZJ88-1|A0A287B4Z4_PIG Computationally mapped isoform of Protein 4.1 OS=Sus scrofa OX=9823 GN=EPB41L1 PE=1 SV=2 CANONICAL=A0A287B4Z4-1" }, "locus": { "chromosome": "17", "start_pos": 39483738, "end_pos": 39435016, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060963.3", "url": "https://www.ensembl.org/id/ENSSSCT00000060963.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031619.2", "url": "https://www.ensembl.org/id/ENSSSCP00000031619.2" } ] } }, { "isoform_ac": "A0A286ZPL1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPL1/entry", "sequence": { "sequence": "MRGPGSGGSGGSSGGGAPRLLARSPVAAGAAGIAAVSLGGAGRGGAERGDRASREGGEGAAPREGASEQASEPGVCAQLECTSEPAGRPPDSPTEDRQRPEAAPPPPGVLVTMTTETGPDSEVKKAQEEAPQQPEAAATATTPVTPAGHGHPEANSNEKHPPQQDARPAEQSLDMEEKDYGEADGLSERTTPSKAQKSPQKIAKKFKSAICRVTLLDASEYECEVEKHGRGQVLFDLVCEHLNLLEKDYFGLTFCDADSQKNWLDPSKEIKKQIRSSPWNFAFTVKFYPPDPAQLTEDITRYYLCLQLRADIITGRLPCSFVTHALLGSYAVQAELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGAEFSRPASVSENHDAGPDGDKREEDGESGGRRSEAEEGEVRTPTKIKELKFLDKPEDVLLKHQASINELKRTLKEPNSKLIHRDRDWERERRLPSSPASPSPKGTPEKANENKPGDAVRQEKHVTSLAANPPGKRVHLRFASPSVPQRAGLREGSEEKVKPPRPRAPESDTGDEDQDQERDAVFLKDNHLAIERKCSSITVSSTSSLEAEVDFTVIGDYHGSAFEDFSRSLPELDRDKSDSETEGLVFSRDLNKGGPSQDDESGGLEDSPDRGACSTPDMPQFEPVKAETMTVSSLAIRKKIEPEAVLQTRVTNVDATQVDGAAPGGKEFMATTPSITTETISTTMENSLKSGKGAAAMIPGPQTVATEIRSLSPIIGKDVLTSTYGATAETLSTSTTTHVTKTVKGGFSETRIEKRIIITGDEDVDQDQALALAIKEAKLQHPDMLVTKAVVYRETDPSPEERDKKPQVR", "length": 1016, "header": "tr|A0A286ZPL1-1|A0A287B4Z4_PIG Computationally mapped isoform of Protein 4.1 OS=Sus scrofa OX=9823 GN=EPB41L1 PE=1 SV=2 CANONICAL=A0A287B4Z4-1" }, "locus": { "chromosome": "17", "start_pos": 39483498, "end_pos": 39360670, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051435.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051435.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033398.2", "url": "https://www.ensembl.org/id/ENSSSCP00000033398.2" } ] } }, { "isoform_ac": "A0A286ZY71-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZY71/entry", "sequence": { "sequence": "MTTETGPDSEVKKAQEEAPQQPEAAATATTPVTPAGHGHPEANSNEKHPPQQDARPAEQSLDMEEKDYGEADGLSERTTPSKAQKSPQKIAKKFKSAICRVTLLDASEYECEVEKHGRGQVLFDLVCEHLNLLEKDYFGLTFCDADSQKNWLDPSKEIKKQIRSSPWNFAFTVKFYPPDPAQLTEDITRYYLCLQLRADIITGRLPCSFVTHALLGSYAVQAELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGAEFSRPASVSENHDAGPDGDKREEDGESGGRRSEAEEGEVRTPTKIKELKPEQETTPRHKQEFLDKPEDVLLKHQASINELKRTLKEPNSKLIHRDRDWERERRLPSSPASPSPKGTPEKANEVGLTLNHSPGALGKDHGEGCYVLMSPSPPHLYGSEHWVFIEREYIRPEELSLLTVTTTQQEESEAGLADILADGRLSKVDILVDKFKVEVATEEMVGARRANTQQQGRMIASPEDFESVWEEGPWVREGPGGAPLPAGCTGAGKLLEGSQLRVDPGEATIWKPQVSGGQLEGPVVEPEEFQACGRPTAPGTRPAEVDVPSSASDTGGLQSFLLDPAHTEARADSSDETDTSLAERSFYLNYGEKDSEDQALPPPLEEREEHFDVPPGPDETRWKLSEELMESWELNSSGPQGSAATAGRNKAQEGEASSEEGAGLRRNHRPNDLEAIDQQLGKGPSPGPAFAGDWDQSRWGVEGEFTHPVSSVAAEEEAPKSGDLMGRAAKSPPAGWNHSPPRGGPVCPDPWAIAPSDDRKPAKPDRGNFLPKERGPVHTQMGEPAVEDSKTPVFLQMEAITPLQTSPRPFSAQSSPEEASPSSPPHGSGEPLQLRDPFGEESPLLLKHAHPPKESLEPKDQGGLVGTPDRGERWAPPVASRKPRAVPEEAEGLVFPSEKQKEMTTFQAGGKQGSLEDISKTSVANKIRIFETHGAETRRVSQGETRAFTELSSEASTGQVEQQRNKLLDLGFVQCQPLGDFAVPKATPSVMLSATRHFREGVSAPSPGEGLMDLELVSASPGRETALEEATGGTGHNKPGDAVRQEKHVTSLAANPPGKRVHLRFASPSVPQRAGLREGSEEKVKPPRPRAPESDTGDEDQDQERDAVFLKDNHLAIERKCSSITVSSTSSLEAEVDFTVIGDYHGSAFEDFSRSLPELDRDKSDSETEGLVFSRDLNKGGPSQDDESGGLEDSPDRGACSTPDMPQFEPVKAETMTVSSLAIRKKIEPEAVLQTRVTNVDATQVDGAAPGGKEFMATTPSITTETISTTMENSLKSGKGAAAMIPGPQTVATEIRSLSPTVKGGFSETRIEKRIIITGDEDVDQDQALALAIKEAKLQHPDMLVTKAVVYRETDPSPEERDKKPQVRLMRLKS", "length": 1581, "header": "tr|A0A286ZY71-1|A0A287B4Z4_PIG Computationally mapped isoform of Protein 4.1 OS=Sus scrofa OX=9823 GN=EPB41L1 PE=1 SV=3 CANONICAL=A0A287B4Z4-1" }, "locus": { "chromosome": "17", "start_pos": 39484013, "end_pos": 39435016, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049303.3", "url": "https://www.ensembl.org/id/ENSSSCT00000049303.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036459.3", "url": "https://www.ensembl.org/id/ENSSSCP00000036459.3" } ] } }, { "isoform_ac": "A0A287A2U2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A2U2/entry", "sequence": { "sequence": "MWSAIVLELQPREQWEGDGEAGGRRPGPDWRWRRRASWAPGRGVSPGHRADSRGVLARENRGRRWQGPGRRRGRGQSPPSWDRECEGARGGVSSSLPHSLPGPLSSVAAQLECTSEPAGRPPDSPTEDRQRPEAAPPPPGVLVTMTTETGPDSEVKKAQEEAPQQPEAAATATTPVTPAGHGHPEANSNEKHPPQQDARPAEQSLDMEEKDYGEADGLSERTTPSKAQKSPQKIAKKFKSAICRVTLLDASEYECEVEKHGRGQVLFDLVCEHLNLLEKDYFGLTFCDADSQKNWLDPSKEIKKQIRSSPWNFAFTVKFYPPDPAQLTEDITRYYLCLQLRADIITGRLPCSFVTHALLGSYAVQAELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGAEFSRPASVSENHDAGPDGDKREEDGESGGRRSEAEEGEVRTPTKIKELKPEQETTPRHKQEFLDKPEDVLLKHQASINELKRTLKEPNSKLIHRDRDWERERRLPSSPASPSPKGTPEKANEVGLTLNHSPGALGKDHGEGCYVLMSPSPPHLYGSEHWVFIEREYIRPEELSLLTVTTTQQEESEAGLADILADGRLSKVDILVDKFKVEVATEEMVGARRANTQQQGRMIASPEDFESVWEEGPWVREGPGGAPLPAGCTGAGKLLEGSQLRVDPGEATIWKPQVSGGQLEGPVVEPEEFQACGRPTAPGTRPAEVDVPSSASDTGGLQSFLLDPAHTEARADSSDETDTSLAERSFYLNYGEKDSEDQALPPPLEEREEHFDVPPGPDETRWKLSEELMESWELNSSGPQGSAATAGRNKAQEGEASSEEGAGLRRNHRPNDLEAIDQQLGKGPSPGPAFAGDWDQSRWGVEGEFTHPVSSVAAEEEAPKSGDLMGRAAKSPPAGWNHSPPRGGPVCPDPWAIAPSDDRKPAKPDRGNFLPKERGPVHTQMGEPAVEDSKTPVFLQMEAITPLQTSPRPFSAQSSPEEASPSSPPHGSGEPLQLRDPFGEESPLLLKHAHPPKESLEPKDQGGLVGTPDRGERWAPPVASRKPRAVPEEAEGLVFPSEKQKEMTTFQAGGKQGSLEDISKTSVANKIRIFETHGAETRRVSQGETRAFTELSSEASTGQVEQQRNKLLDLGFVQCQPLGDFAVPKATPSVMLSATRHFREGVSAPSPGEGLMDLELVSASPGRETALEEATGGTGHNKPGDAVRQEKHVTSLAANPPGKRVHLRFASPSVPQRAGLREGSEEKVKPPRPRAPESDTGDEDQDQERDAVFLKDNHLAIERKCSSITVSSTSSLEAEVDFTVIGDYHGSAFEDFSRSLPELDRDKSDSETEGLVFSRDLNKGGPSQDDESGGLEDSPDRGACSTPDMPQFEPVKAETMTVSSLAIRKKIEPEAVLQTRVTNVDATQVDGAAPGGKEFMATTPSITTETISTTMENSLKSGKGAAAMIPGPQTVATEIRSLSPIIGKDVLTSTYGATAETLSTSTTTHVTKTVKGGFSETRIEKRIIITGDEDVDQDQALALAIKEAKLQHPDMLVTKAVVYRETDPSPEERDKKPQVRLMRLKS", "length": 1753, "header": "tr|A0A287A2U2-1|A0A287B4Z4_PIG Computationally mapped isoform of Protein 4.1 OS=Sus scrofa OX=9823 GN=EPB41L1 PE=1 SV=3 CANONICAL=A0A287B4Z4-1" }, "locus": { "chromosome": "17", "start_pos": 39484013, "end_pos": 39360225, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046812.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046812.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038244.3", "url": "https://www.ensembl.org/id/ENSSSCP00000038244.3" } ] } }, { "isoform_ac": "A0A287ARK5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ARK5/entry", "sequence": { "sequence": "MRGPGSGGSGGSSGGGAPRLLARSPVAAGAAGIAAVSLGGAGRGGAERGDRASREGGEGAAPREGASEQASEPGVCAQLECTSEPAGRPPDSPTEDRQRPEAAPPPPGVLVTMTTETGPDSEVKKAQEEAPQQPEAAATATTPVTPAGHGHPEANSNEKHPPQQDARPAEQSLDMEEKDYGEADGLSERTTPSKAQKSPQKIAKKFKSAICRVTLLDASEYECEVEKHGRGQVLFDLVCEHLNLLEKDYFGLTFCDADSQKNWLDPSKEIKKQIRSSPWNFAFTVKFYPPDPAQLTEDITRYYLCLQLRADIITGRLPCSFVTHALLGSYAVQAELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGAEFSRPASVSENHDAGPDGDKREEDGESGGRRSEAEEGEVRTPTKIKELKFLDKPEDVLLKHQASINELKRTLKEPNSKLIHRDRDWERERRLPSSPASPSPKGTPEKANEGSEHWVFIEREYIRPEELSLLTVTTTQQEESEAGLADILADGRLSKVDILVDKFKVEVATEEMVGARRANTQQQGRMIASPEDFESVWEEGPWVREGPGGAPLPAGCTGAGKLLEGSQLRVDPGEATIWKPQVSGGQLEGPVVEPEEFQACGRPTAPGTRPAEVDVPSSASDTGGLQSFLLDPAHTEARADSSDETDTSLAERSFYLNYGEKDSEDQALPPPLEEREEHFDVPPGPDETRWKLSEELMESWELNSSGPQGSAATAGRNKAQEGEASSEEGAGLRRNHRPNDLEAIDQQLGKGPSPGPAFAGDWDQSRWGVEGEFTHPVSSVAAEEEAPKSGDLMGRAAKSPPAGWNHSPPRGGPVCPDPWAIAPSDDRKPAKPDRGNFLPKERGPVHTQMGEPAVEDSKTPVFLQMEAITPLQTSPRPFSAQSSPEEASPSSPPHGSGEPLQLRDPFGEESPLLLKHAHPPKESLEPKDQGGLVGTPDRGERWAPPVASRKPRAVPEEAEGLVFPSEKQKEMTTFQAGGKQGSLEDISKTSVANKIRIFETHGAETRRVSQGETRAFTELSSEASTGQVEQQRNKLLDLGFVQCQPLGDFAVPKATPSVMLSATRHFREGVSAPSPGEGLMDLELVSASPGRETALEEATGGTGHNKPGDAVRQEKHVTSLAANPPGKRVHLRFASPSVPQRAGLREGSEEKVKPPRPRAPESDTGDEDQDQERDAVFLKDNHLAIERKCSSITVSSTSSLEAEVDFTVIGDYHGSAFEDFSRSLPELDRDKSDSETEGLVFSRDLNKGGPSQDDESGGLEDSPDRGACSTPDMPQFEPVKAETMTVSSLAIRKKIEPEAVLQTRVTNVDATQVDGAAPGGKEFMATTPSITTETISTTMENSLKSGKGAAAMIPGPQTVATEIRSLSPIIGKDVLTSTYGATAETLSTSTTTHVTKTVKGGFSETRIEKRIIITGDEDVDQDQALALAIKEAKLQHPDMLVTKAVVYRETDPSPEERDKKPQVR", "length": 1671, "header": "tr|A0A287ARK5-1|A0A287B4Z4_PIG Computationally mapped isoform of Protein 4.1 OS=Sus scrofa OX=9823 GN=EPB41L1 PE=1 SV=3 CANONICAL=A0A287B4Z4-1" }, "locus": { "chromosome": "17", "start_pos": 39483498, "end_pos": 39360670, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050498.3", "url": "https://www.ensembl.org/id/ENSSSCT00000050498.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046700.3", "url": "https://www.ensembl.org/id/ENSSSCP00000046700.3" } ] } }, { "isoform_ac": "A0A287AVU3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AVU3/entry", "sequence": { "sequence": "MWSAIVLELQPREQWEGDGEAGGRRPGPDWRWRRRASWAPGRGVSPGHRADSRGVLARENRGRRWQGPGRRRGRGQSPPSWDRECEGARGGVSSSLPHSLPGPLSSVAAQLECTSEPAGRPPDSPTEDRQRPEAAPPPPGVLVTMTTETGPDSEVKKAQEEAPQQPEAAATATTPVTPAGHGHPEANSNEKHPPQQDARPAEQSLDMEEKDYGEADGLSERTTPSKAQKSPQKIAKKFKSAICRVTLLDASEYECEVEKHGRGQVLFDLVCEHLNLLEKDYFGLTFCDADSQKNWLDPSKEIKKQIRSSPWNFAFTVKFYPPDPAQLTEDITRYYLCLQLRADIITGRLPCSFVTHALLGSYAVQAELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGAEFSRPASVSENHDAGPDGDKREEDGESGGRRSEAEEGEVRTPTKIKELKPEQETTPRHKQEFLDKPEDVLLKHQASINELKRTLKEPNSKLIHRDRDWERERRLPSSPASPSPKGTPEKANESRRTQDTSQQDLAPEPGTATGLEVFTQKSLAASPEGSEHWVFIEREYIRPEELSLLTVTTTQQEESEAGLADILADGRLSKVDILVDKFKVEVATEEMVGARRANTQQQGRMIASPEDFESVWEEGPWVREGPGGAPLPAGCTGAGKLLEGSQLRVDPGEATIWKPQVSGGQLEGPVVEPEEFQACGRPTAPGTRPAEVDVPSSASDTGGLQSFLLDPAHTEARADSSDETDTSLAERSFYLNYGEKDSEDQALPPPLEEREEHFDVPPGPDETRWKLSEELMESWELNSSGPQGSAATAGRNKAQEGEASSEEGAGLRRNHRPNDLEAIDQQLGKGPSPGPAFAGDWDQSRWGVEGEFTHPVSSVAAEEEAPKSGDLMGRAAKSPPAGWNHSPPRGGPVCPDPWAIAPSDDRKPAKPDRGNFLPKERGPVHTQMGEPAVEDSKTPVFLQMEAITPLQTSPRPFSAQSSPEEASPSSPPHGSGEPLQLRDPFGEESPLLLKHAHPPKESLEPKDQGGLVGTPDRGERWAPPVASRKPRAVPEEAEGLVFPSEKQKEMTTFQAGGKQGSLEDISKTSVANKIRIFETHGAETRRVSQGETRAFTELSSEASTGQVEQQRNKLLDLGFVQCQPLGDFAVPKATPSVMLSATRHFREGVSAPSPGEGLMDLELVSASPGRETALEEATGGTGHNKPGDAVRQEKHVTSLAANPPGKRVHLRFASPSVPQRAGLREGSEEKVKPPRPRAPESDTGDEDQDQERDAVFLKDNHLAIERKCSSITVSSTSSLEAEVDFTVIGDYHGSAFEDFSRSLPELDRDKSDSETEGLVFSRDLNKGGPSQDDESGGLEDSPDRGACSTPDMPQFEPVKAETMTVSSLAIRKKIEPEAVLQTRVTNVDATQVDGAAPGGKEFMATTPSITTETISTTMENSLKSGKGAAAMIPGPQTVATEIRSLSPIIGKDVLTSTYGATAETLSTSTTTHVTKTVKGGFSETRIEKRIIITGDEDVDQDQALALAIKEAKLQHPDMLVTKAVVYRETDPSPEERDKKPQVR", "length": 1750, "header": "tr|A0A287AVU3-1|A0A287B4Z4_PIG Computationally mapped isoform of Protein 4.1 OS=Sus scrofa OX=9823 GN=EPB41L1 PE=1 SV=2 CANONICAL=A0A287B4Z4-1" }, "locus": { "chromosome": "17", "start_pos": 39483498, "end_pos": 39360225, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055629.3", "url": "https://www.ensembl.org/id/ENSSSCT00000055629.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000048046.2", "url": "https://www.ensembl.org/id/ENSSSCP00000048046.2" } ] } }, { "isoform_ac": "A0A287B4Z4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B4Z4/entry", "sequence": { "sequence": "MTTETGPDSEVKKAQEEAPQQPEAAATATTPVTPAGHGHPEANSNEKHPPQQDARPAEQSLDMEEKDYGEADGLSERTTPSKAQKSPQKIAKKFKSAICRVTLLDASEYECEVEKHGRGQVLFDLVCEHLNLLEKDYFGLTFCDADSQKNWLDPSKEIKKQIRSSPWNFAFTVKFYPPDPAQLTEDITRYYLCLQLRADIITGRLPCSFVTHALLGSYAVQAELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGAEFSRPASVSENHDAGPDGDKREEDGESGGRRSEAEEGEVRTPTKIKELKPEQETTPRHKQEFLDKPEDVLLKHQASINELKRTLKEPNSKLIHRDRDWERERRLPSSPASPSPKGTPEKANERAGLREGSEEKVKPPRPRAPESDTGDEDQDQERDAVFLKDNHLAIERKCSSITVSSTSSLEAEVDFTVIGDYHGSAFEDFSRSLPELDRDKSDSETEGLVFSRDLNKGGPSQDDESGGLEDSPDRGACSTPDMPQFEPVKAETMTVSSLAIRKKIEPEAVLQTRVTNVDATQQVDGAAPGGKEFMATTPSITTETISTTMENSLKSGKGAAAMIPGPQTVATEIRSLSPIIGKDVLTSTYGATAETLSTSTTTHVTKTVKGGFSETRIEKRIIITGDEDVDQDQALALAIKEAKLQHPDMLVTKAVVYRETDPSPEERDKKPQES", "length": 881, "header": "tr|A0A287B4Z4-1|A0A287B4Z4_PIG Isoform 1 of Protein 4.1 OS=Sus scrofa OX=9823 GN=EPB41L1 PE=1 SV=3 CANONICAL=A0A287B4Z4-1" }, "locus": { "chromosome": "17", "start_pos": 39491627, "end_pos": 39435016, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000036910.3", "url": "https://www.ensembl.org/id/ENSSSCT00000036910.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051360.3", "url": "https://www.ensembl.org/id/ENSSSCP00000051360.3" } ] } }, { "isoform_ac": "A0A287BJ38-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BJ38/entry", "sequence": { "sequence": "MATSNHFLSLRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGAEFSRPASVSENHDAGPDGDKREEDGESGGRRSEAEEGEVRTPTKIKELKPEQETTPRHKQEFLDKPEDVLLKHQASINELKRTLKEPNSKLIHRDRDWERERRLPSSPASPSPKGTPEKANEVGLTLNHSPGALGKDHGEGCYVLMSPSPPHLYGSEHWVFIEREYIRPEELSLLTVTTTQQEESEAGLADILADGRLSKVDILVDKFKVEVATEEMVGARRANTQQQGRMIASPEDFESVWEEGPWVREGPGGAPLPAGCTGAGKLLEGSQLRVDPGEATIWKPQVSGGQLEGPVVEPEEFQACGRPTAPGTRPAEVDVPSSASDTGGLQSFLLDPAHTEARADSSDETDTSLAERSFYLNYGEKDSEDQALPPPLEEREEHFDVPPGPDETRWKLSEELMESWELNSSGPQGSAATAGRNKAQEGEASSEEGAGLRRNHRPNDLEAIDQQLGKGPSPGPAFAGDWDQSRWGVEGEFTHPVSSVAAEEEAPKSGDLMGRAAKSPPAGWNHSPPRGGPVCPDPWAIAPSDDRKPAKPDRGNFLPKERGPVHTQMGEPAVEDSKTPVFLQMEAITPLQTSPRPFSAQSSPEEASPSSPPHGSGEPLQLRDPFGEESPLLLKHAHPPKESLEPKDQGGLVGTPDRGERWAPPVASRKPRAVPEEAEGLVFPSEKQKEMTTFQAGGKQGSLEDISKTSVANKIRIFETHGAETRRVSQGETRAFTELSSEASTGQVEQQRNKLLDLGFVQCQPLGDFAVPKATPSVMLSATRHFREGVSAPSPGEGLMDLELVSASPGRETALEEATGGTGHNKPGDAVRQEKHVTSLAANPPGKRVHLRFASPSVPQRAGLREGSEEKVKPPRPRAPESDTGDEDQDQERDAVFLKDNHLAIERKCSSITVSSTSSLEAEVDFTVIGDYHGSAFEDFSRSLPELDRDKSDSETEGLVFSRDLNKGGPSQDDESGGLEDSPDRGACSTPDMPQFEPVKAETMTVSSLAIRKKIEPEAVLQTRVTNVDATQVDGAAPGGKEFMATTPSITTETISTTMENSLKSGKGAAAMIPGPQTVATEIRSLSPIIGKDVLTSTYGATAETLSTSTTTHVTKTVKGGFSETRIEKRIIITGDEDVDQDQALALAIKEAKLQHPDMLVTKAVVYRETDPSPEERDKKPQVRLMRLSSQGMEETTEARSSQGHFPAKGPTERLEPQHSFDPPPSPRTFLESQLPQIPPVRVQRGRKTGSSVSLGFQAPDSEK", "length": 1432, "header": "tr|A0A287BJ38-1|A0A287BJ38_PIG Computationally mapped isoform of Erythrocyte membrane protein band 4.1 like 1 OS=Sus scrofa OX=9823 GN=EPB41L1 PE=1 SV=3 CANONICAL=A0A287B4Z4-1" }, "locus": { "chromosome": "17", "start_pos": 39483738, "end_pos": 39450740, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038120.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038120.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056078.3", "url": "https://www.ensembl.org/id/ENSSSCP00000056078.3" } ] } }, { "isoform_ac": "A0A287BLI2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BLI2/entry", "sequence": { "sequence": "MTTETGPDSEVKKAQEEAPQQPEAAATATTPVTPAGHGHPEANSNEKHPPQQDARPAEQSLDMEEKDYGEADGLSERTTPSKAQKSPQKIAKKFKSAICRVTLLDASEYECEVEKHGRGQVLFDLVCEHLNLLEKDYFGLTFCDADSQKNWLDPSKEIKKQIRSSPWNFAFTVKFYPPDPAQLTEDITRYYLCLQLRADIITGRLPCSFVTHALLGSYAVQAELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGAEFSRPASVSENHDAGPDGDKREEDGESGGRRSEAEEGEVRTPTKIKELKFLDKPEDVLLKHQASINELKRTLKEPNSKLIHRDRDWERERRLPSSPASPSPKGTPEKANERAGLREGSEEKVKPPRPRAPESDTGDEDQDQERDAVFLKDNHLAIERKCSSITVSSTSSLEAEVDFTVIGDYHGSAFEDFSRSLPELDRDKSDSETEGLVFSRDLNKGGPSQDDESGGLEDSPDRGACSTPDMPQFEPVKAETMTVSSLAIRKKIEPEAVLQTRVTNVDATQENSLKSGKGAAAMIPGPQTVATEIRSLSPIIGKDVLTSTYGATAETLSTSTTTHVTKTVKGGFSETRIEKRIIITGDEDVDQDQALALAIKEAKLQHPDMLVTKAVVYRETDPSPEERDKKPQES", "length": 841, "header": "tr|A0A287BLI2-1|A0A287BLI2_PIG Computationally mapped isoform of Protein 4.1 OS=Sus scrofa OX=9823 GN=EPB41L1 PE=1 SV=3 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46386:SF7", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00439", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00439", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01342", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01342", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03172", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03172", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZLY8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLY8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZLY8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLY8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZXU7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZXU7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZXU7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZXU7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A1X3", "url": "https://www.uniprot.org/uniprotkb/A0A287A1X3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A1X3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A1X3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ANT5", "url": "https://www.uniprot.org/uniprotkb/A0A287ANT5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ANT5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ANT5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287APV4", "url": "https://www.uniprot.org/uniprotkb/A0A287APV4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287APV4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287APV4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B4U8", "url": "https://www.uniprot.org/uniprotkb/A0A287B4U8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B4U8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B4U8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BAR6", "url": "https://www.uniprot.org/uniprotkb/A0A287BAR6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BAR6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BAR6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BJT6", "url": "https://www.uniprot.org/uniprotkb/A0A287BJT6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BJT6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BJT6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMZ1", "url": "https://www.uniprot.org/uniprotkb/F1SMZ1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMZ1-1", "url": "https://www.uniprot.org/uniprotkb/F1SMZ1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPLQHRAWLPKLFKVFASLFLSCPFHRRITMTRPLEEALFQHFIHQKLEIAYAINKPFPFFEGLRDNNFITDTLYRESLEACRNLVPVSRVVYNILTKLEKTFSLSFLEMLFGHINLYEYPSLMAVFKSFKNVVTSHRGWSRSAAAPQEAPASTAERSSVRPLLPLPACQGPPPSGPSLVPSVSEPAAPVQPSTEILPKPPSPAGLAKTPPGIIQEGRLTPVSSDSLILQTEDKEDTPEVPCTPSGSAPAIKDDSPKPHDPEELQEAPRMPPNKKGKKKKRCIWATPKRRHKKKCLPREGALPDHGIQEKLQGVDQETQRKDDSTGNAEVMTTAPKTKPKCARTLKPEETTDDIPEVVEEKRPQEPPSRPTRTANKGKERNIYSCSSSKKRQKKSLPREKPKDKTLDFHSLILPVTCGEAKGILYKEKMKLGSSEKCIQNEEGVWFTPREFEIEGKQKHKKYWKRSVLCGGKTLEHLIKKGLLICPPKRSLKRKPENSKECEVCCGGGLLLCCDTCPRAFHENCHIPPAVAKRRPWSCTFCRMREASGSQRCLRGSEGLARQMLPEEQLKCEFLLLKAYCHPQSSFFAETPRNIQDYGEPFKEAMWLDLVKERLTERVYTVAWFLRDMRLIFRNHQMFYKASDFGQIGLDLEAEFEKDLKKMFTVHEAR", "length": 669, "header": "tr|A0A287BAR6-1|A0A287BAR6_PIG Isoform 1 of SP110 nuclear body protein OS=Sus scrofa OX=9823 GN=SP110 PE=4 SV=3 CANONICAL=A0A287BAR6-1" }, "isoforms": [ { "isoform_ac": "A0A286ZLY8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLY8/entry", "sequence": { "sequence": "MPLQHRAWLPKLFKVFASLFLSCPFHRRITMTRPLEEALFQHFIHQKLEIAYAINKPFPFFEGLRDNNFITDTLYRESLEACRNLVPVSRVVYNILTKLEKTFSLSFLEMQMLPEEQLKCEFLLLKAYCHPQSSFFAETPRNIQDYGEPFKEAMWLDLVKERLTERVYTVAWFLRDMRLIFRNHQMFYKASDFGQIGLDLEAEFEKDLKKMFTVHEAR", "length": 218, "header": "tr|A0A286ZLY8-1|A0A287BAR6_PIG Computationally mapped isoform of SP110 nuclear body protein OS=Sus scrofa OX=9823 GN=SP110 PE=4 SV=2 CANONICAL=A0A287BAR6-1" }, "locus": { "chromosome": "15", "start_pos": 131223546, "end_pos": 131170157, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062509.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062509.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032641.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032641.2" } ] } }, { "isoform_ac": "A0A286ZXU7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZXU7/entry", "sequence": { "sequence": "MGEGEPTRRPHTTHPASGSQRCLRGSEGLARQMLPEEQLKCEFLLLKAYCHPQSSFFAETPRNIQDYGEPFKEAMWLDLVKERLTERVYTVAWFLRDMRLIFRNHQMFYKASDFGQIGLDLEAEFEKDLKKMFTVHEAR", "length": 139, "header": "tr|A0A286ZXU7-1|A0A287BAR6_PIG Computationally mapped isoform of SP110 nuclear body protein OS=Sus scrofa OX=9823 GN=SP110 PE=4 SV=3 CANONICAL=A0A287BAR6-1" }, "locus": { "chromosome": "15", "start_pos": 131173538, "end_pos": 131170157, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046261.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046261.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036524.3", "url": "https://www.ensembl.org/id/ENSSSCP00000036524.3" } ] } }, { "isoform_ac": "A0A287A1X3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A1X3/entry", "sequence": { "sequence": "MKLRSHVAVAVMKAKEALFQHFIHQKLEIAYAINKPFPFFEGLRDNNFITDTLYRESLEACRNLVPVSRVVYNILTKLEKTFSLSFLEMLFGHINLYEYPSLMAVFKSFKNVVTSHRGWSRSAAAPQEAPASTAERSSVRPLLPLPACQGPPPSGPSLVPSVSEPAAPVQPSTEILPKPPSPAGLAKTPPGIIQEGRLTPVSSDSLILQTEDKEDTPEVPCTPSGSAPAIKDDSPKPHDPEELQEAPRMPPNKKGKKKKRCIWATPKRRHKKKCLPREGALPDHGIQEKLQGVDQETQRKDDSTGNAEVMTTAPKTKPKCARTLKPEETTDDIPEVVEEKRPQEPPSRPTRTANKEKPKDKTLDFHSLILPVTCGEAKGILYKEKMKLGSSEKCIQNEEGVWFTPREFEIEGKQKHKKYWKRSVLCGGKTLEHLIKKGLLICPPKRSLKRKPENSKECEVCCGGGLLLCCDTCPRAFHENCHIPPAVAKRRPWSCTFCRMREASGSQRCLRGSEGLARQMLPEEQLKCEFLLLKAYCHPQSSFFAETPRNIQDYGEPFKEAMWLDLVKERLTERVYTVAWFLRDMRLIFRNHQMFYKASDFGQIGLDLEAEFEKDLKKMFTVHEAR", "length": 626, "header": "tr|A0A287A1X3-1|A0A287BAR6_PIG Computationally mapped isoform of SP110 nuclear body protein OS=Sus scrofa OX=9823 GN=SP110 PE=4 SV=2 CANONICAL=A0A287BAR6-1" }, "locus": { "chromosome": "15", "start_pos": 131224461, "end_pos": 131170157, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041160.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041160.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037919.2", "url": "https://www.ensembl.org/id/ENSSSCP00000037919.2" } ] } }, { "isoform_ac": "A0A287ANT5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ANT5/entry", "sequence": { "sequence": "MAVSVSRRITMTRPLEEALFQHFIHQKLEIAYAINKPFPFFEGLRDNNFITDTLYRESLEACRNLVPVSRVVYNILTKLEKTFSLSFLEMLFGHINLYEYPSLMAVFKSFKNVVTSHRGWSRSAAAPQEAPASTAERSSVRPLLPLPACQGPPPSGPSLVPSVSEPAAPVQPSTEILPKPPSPAGLAKTPPGIIQEGRLTPVSSDSLILQTEDKEDTPEVPCTPSGSAPAIKDDSPKPHDPEELQEAPRMPPNKKGKKKKRCIWATPKRRHKKKCLPREGALPDHGIQEKLQGVDQETQRKDDSTGNAEVMTTAPKTKPKCARTLKPEETTDDIPEVVEEKRPQEPPSRPTRTANKEKPKDKTLDFHSLILPVTCGEAKGILYKEKMKLGSSEKCIQNEEGVWFTPREFEIEGKQKHKKYWKRSVLCGGKTLEHLIKKGLLICPPKRSLKRKPENSKECEVCCGGGLLLCCDTCPRAFHENCHIPPAVAKRRPWSCTFCRMREASGSQRCLRGSEGLARQMLPEEQLKCEFLLLKAYCHPQSSFFAETPRNIQDYGEPFKEAMWLDLVKERLTERVYTVAWFLRDMRLIFRNHQMFYKASDFGQIGLDLEAEFEKDLKKMFTVHEAR", "length": 627, "header": "tr|A0A287ANT5-1|A0A287BAR6_PIG Computationally mapped isoform of SP110 nuclear body protein OS=Sus scrofa OX=9823 GN=SP110 PE=4 SV=3 CANONICAL=A0A287BAR6-1" }, "locus": { "chromosome": "15", "start_pos": 131226433, "end_pos": 131170157, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063867.3", "url": "https://www.ensembl.org/id/ENSSSCT00000063867.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045556.3", "url": "https://www.ensembl.org/id/ENSSSCP00000045556.3" } ] } }, { "isoform_ac": "A0A287APV4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287APV4/entry", "sequence": { "sequence": "MPLQHRAWLPKLFKVFASLFLSCPFHRRITMTRPLEEALFQHFIHQKLEIAYAINKPFPFFEGLRDNNFITDTLYRESLEACRNLVPVSRVVYNILTKLEKTFSLSFLEMLFGHINLYEYPSLMAVFKSFKNVVTSHRGWSRSAAAPQEAPASTAERSSVRPLLPLPACQGPPPTSGVSGDLRAWPGRCCRRSSW", "length": 195, "header": "tr|A0A287APV4-1|A0A287BAR6_PIG Computationally mapped isoform of SP110 nuclear body protein OS=Sus scrofa OX=9823 GN=SP110 PE=4 SV=3 CANONICAL=A0A287BAR6-1" }, "locus": { "chromosome": "15", "start_pos": 131223546, "end_pos": 131173218, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047713.3", "url": "https://www.ensembl.org/id/ENSSSCT00000047713.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045984.3", "url": "https://www.ensembl.org/id/ENSSSCP00000045984.3" } ] } }, { "isoform_ac": "A0A287B4U8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B4U8/entry", "sequence": { "sequence": "MPLQHRAWLPKLFKVFASLFLSCPFHRRITMTRPLEEALFQHFIHQKLEIAYAINKPFPFFEGLRDNNFITDTLYRESLEACRNLVPVSRVVYNILTKLEKTFSLPLFILQKCEFLLLKAYCHPQSSFFAETPRNIQDYGEPFKEAMWLDLVKERLTERVYTVAWFLRDMRLIFRNHQMFYKASDFGQIGLDLEAEFEKDLKKMFTVHEAR", "length": 211, "header": "tr|A0A287B4U8-1|A0A287B4U8_PIG Computationally mapped isoform of SP110 nuclear body protein OS=Sus scrofa OX=9823 GN=SP110 PE=4 SV=3 CANONICAL=A0A287BAR6-1" }, "locus": { "chromosome": "15", "start_pos": 131223546, "end_pos": 131170157, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046122.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046122.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051505.3", "url": "https://www.ensembl.org/id/ENSSSCP00000051505.3" } ] } }, { "isoform_ac": "A0A287BAR6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BAR6/entry", "sequence": { "sequence": "MPLQHRAWLPKLFKVFASLFLSCPFHRRITMTRPLEEALFQHFIHQKLEIAYAINKPFPFFEGLRDNNFITDTLYRESLEACRNLVPVSRVVYNILTKLEKTFSLSFLEMLFGHINLYEYPSLMAVFKSFKNVVTSHRGWSRSAAAPQEAPASTAERSSVRPLLPLPACQGPPPSGPSLVPSVSEPAAPVQPSTEILPKPPSPAGLAKTPPGIIQEGRLTPVSSDSLILQTEDKEDTPEVPCTPSGSAPAIKDDSPKPHDPEELQEAPRMPPNKKGKKKKRCIWATPKRRHKKKCLPREGALPDHGIQEKLQGVDQETQRKDDSTGNAEVMTTAPKTKPKCARTLKPEETTDDIPEVVEEKRPQEPPSRPTRTANKGKERNIYSCSSSKKRQKKSLPREKPKDKTLDFHSLILPVTCGEAKGILYKEKMKLGSSEKCIQNEEGVWFTPREFEIEGKQKHKKYWKRSVLCGGKTLEHLIKKGLLICPPKRSLKRKPENSKECEVCCGGGLLLCCDTCPRAFHENCHIPPAVAKRRPWSCTFCRMREASGSQRCLRGSEGLARQMLPEEQLKCEFLLLKAYCHPQSSFFAETPRNIQDYGEPFKEAMWLDLVKERLTERVYTVAWFLRDMRLIFRNHQMFYKASDFGQIGLDLEAEFEKDLKKMFTVHEAR", "length": 669, "header": "tr|A0A287BAR6-1|A0A287BAR6_PIG Isoform 1 of SP110 nuclear body protein OS=Sus scrofa OX=9823 GN=SP110 PE=4 SV=3 CANONICAL=A0A287BAR6-1" }, "locus": { "chromosome": "15", "start_pos": 131223546, "end_pos": 131170157, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038109.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038109.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053159.3", "url": "https://www.ensembl.org/id/ENSSSCP00000053159.3" } ] } }, { "isoform_ac": "A0A287BJT6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BJT6/entry", "sequence": { "sequence": "MAVSVSRRITMTRPLEEALFQHFIHQKLEIAYAINKPFPFFEGLRDNNFITDTLYRESLEACRNLVPVSRVVYNILTKLEKTFSLSFLEMLFGHINLYEYPSLMAVFKSFKNVVTSHRGWSRSAAAPQEAPASTAERSSVRPLLPLPACQGPPPSGPSLVPSVSEPAAPVQPSTEILPKPPSPAGLAKTPPGIIQEGRLTPVSSDSLILQTEDKEDTPEVPCTPSGSAPAIKDDSPKPHDPEELQEAPRMPPNKKGKKKKRCIWATPKRRHKKKCLPREGALPDHGIQEKLQGVDQETQRKDDSTGNAEVMTTAPKTKPKCARTLKPEETTDDIPEVVEEKRPQEPPSRPTRTANKGKERNIYSCSSSKKRQKKSLPREKPKDKTLDFHSLILPVTCGEAKGILYKEKMKLGSSEKCIQNEEGVWFTPREFEIEGKQKHKKYWKRSVLCGGKTLEHLIKKGLLICPPKRSLKRKPENSKECEVCCGGGLLLCCDTCPRAFHENCHIPPAVAKRRPWSCTFCRMREASGSQRCLRGSEGLARQMLPEEQLVSQKCEFLLLKAYCHPQSSFFAETPRNIQDYGEPFKEAMWLDLVKERLTERVYTVAWFLRDMRLIFRNHQMFYKASDFGQIGLDLEAEFEKDLKKMFTVHEAR", "length": 652, "header": "tr|A0A287BJT6-1|A0A287BJT6_PIG Computationally mapped isoform of SP110 nuclear body protein OS=Sus scrofa OX=9823 GN=SP110 PE=4 SV=2 CANONICAL=A0A287BAR6-1" }, "locus": { "chromosome": "15", "start_pos": 131226433, "end_pos": 131170157, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041167.2", "url": "https://www.ensembl.org/id/ENSSSCT00000041167.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056418.2", "url": "https://www.ensembl.org/id/ENSSSCP00000056418.2" } ] } }, { "isoform_ac": "F1SMZ1-1", "url": "https://www.uniprot.org/uniprotkb/F1SMZ1/entry", "sequence": { "sequence": "MPLQHRAWLPKLFKVFASLFLSCPFHRRITMTRPLEEALFQHFIHQKLEIAYKCEFLLLKAYCHPQSSFFAETPRNIQDYGEPFKEAMWLDLVKERLTERVYTVAWFLRDMRLIFRNHQMFYKASDFGQIGLDLEAEFEKDLKKMFTVHEAR", "length": 152, "header": "tr|F1SMZ1-1|A0A287BAR6_PIG Computationally mapped isoform of SP110 nuclear body protein OS=Sus scrofa OX=9823 GN=SP110 PE=4 SV=5 CANONICAL=A0A287BAR6-1" }, "locus": { "chromosome": "15", "start_pos": 131223546, "end_pos": 131170157, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017706.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017706.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017225.5", "url": "https://www.ensembl.org/id/ENSSSCP00000017225.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SMZ1", "url": "https://www.uniprot.org/uniprotkb/F1SMZ1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100519278", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519278", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q3KRF1-1", "protein_name": "Sp110 nuclear body protein", "gene_name": "Sp110", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFTLTKALEKALLQHFIYTKLDIAYAINKPFPFFEALRDNSFITERMYKESLEACQNLVPLSKVVHNILTSLEQTFDPSMLLILFSKVNLREYPSLGAICRSFRNVGNAYEGRNRPAPTLLGASTNPAEGCSFQTLLPQPRSQALPPSHLSSGLRIRDPGTTSLQITEILDEQPSPSHPAAPLPGYIREGKTTPVSSRDHQRKDKEDSQEMPHHPSGPEAVVKDILTSKTNNRDDSGAQPPGSPGTMHVVQDNSPAPNDPEVPQEAPCTPANKKARKRKSCIWSNSKRRRQKKKPPQHKMMGVASPGPGVQEKLKVVGQRTLNQDDSTRNVKVVTRTLRERTRCAQTSSSQEISKEASKPRARKRPQKRPHTAGRTIHVPEKSKDDAVDFLSPTLSVTCGEARGTLFKEKLKQGSSEKCIQNEAGAWLTVKEFLKKGGKATSKDWKKAIRCNKKTLRSLEQDGFLFCTSKSKPQKECD", "length": 478 }, "evidence": [ { "id": "A0A287BAR6", "url": "https://omabrowser.org/oma/group/A0A287BAR6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8BVK9-1", "protein_name": "Sp110 nuclear body protein", "gene_name": "Sp110", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFTLTKALEKALLQHFIYMKVNIAYAINKPFPFFEALRDNSFITERMYKESLEACQNLVPLSKVVHNILTSLEQTFHPSVLLTLFSKVNLREYPSLVAIFRSFRNVGYTYEEKNRPPLTLLEDLANPAEGCSLQTLLPPPRPQISLPSHLSSAPRVCDPRATAQPIIEILDEQPSPSPRAVPLLGCIQEGKTTPVSSRDHQRKDKEDSREMPHSPSGPESVVKDDSPAANDLEMAREVPCTPANKKARRKKRPNWSNSKRRRQKKKPRQDEMMGVASPGHGVQEKLKAVSRRTLWKDDSSTNVKEVTKTQRTRMRRAQTSNSQEISKEASKTSGRKRPSTARRTTQVPEKTKNDAVDFSPTLPVTCGKAKGTLFQEKLKQGASKKCIQNEAGDWLTVKEFLNEGGRATSKDWKGVIRCNGETLRHLEQKGLLFFTSKSKPQKKGA", "length": 445 }, "evidence": [ { "id": "A0A287BAR6", "url": "https://omabrowser.org/oma/group/A0A287BAR6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9HB58-1", "protein_name": "Sp110 nuclear body protein", "gene_name": "SP110", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MFTMTRAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLDNSIITKRMYMESLEACRNLIPVSRVVHNILTQLERTFNLSLLVTLFSQINLREYPNLVTIYRSFKRVGASYEWQSRDTPILLEAPTGLAEGSSLHTPLALPPPQPPQPSCSPCAPRVSEPGTSSQQSDEILSESPSPSDPVLPLPALIQEGRSTSVTNDKLTSKMNAEEDSEEMPSLLTSTVQVASDNLIPQIRDKEDPQEMPHSPLGSMPEIRDNSPEPNDPEEPQEVSSTPSDKKGKKRKRCIWSTPKRRHKKKSLPGGTASSRHGIQKKLKRVDQVPQKKDDSTCNSTVETRAQKARTECARKSRSEEIIDGTSEMNEGKRSQKTPSTPRRVTQGAASPGHGIQEKLQVVDKVTQRKDDSTWNSEVMMRVQKARTKCARKSRLKEKKKEKDICSSSKRRFQKNIHRRGKPKSDTVDFHCSKLPVTCGEAKGILYKKKMKHGSSVKCIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCEGMTLGELLKRKNSDECEVCCQGGQLLCCGTCPRVFHEDCHIPPVEAKRMLWSCTFCRMKRSSGSQQCHHVSKTLERQMQPQDQLIRDYGEPFQEAMWLDLVKERLITEMYTVAWFVRDMRLMFRNHKTFYKASDFGQVGLDLEAEFEKDLKDVLGFHEANDGGFWTLP", "length": 689 }, "evidence": [ { "id": "A0A287BAR6", "url": "https://omabrowser.org/oma/group/A0A287BAR6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAR6", "url": "https://www.uniprot.org/uniprotkb/A0A287BAR6" } ], "pmid": "" }, { "name": "nuclear lumen", "id": "GO:0031981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031981", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAR6", "url": "https://www.uniprot.org/uniprotkb/A0A287BAR6" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAR6", "url": "https://www.uniprot.org/uniprotkb/A0A287BAR6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAR6", "url": "https://www.uniprot.org/uniprotkb/A0A287BAR6" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAR6", "url": "https://www.uniprot.org/uniprotkb/A0A287BAR6" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAR6", "url": "https://www.uniprot.org/uniprotkb/A0A287BAR6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAR6", "url": "https://www.uniprot.org/uniprotkb/A0A287BAR6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287BAR6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 669, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287BAR6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287BAR6" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287BAR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BAR6" }, { "id": "PS51414", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51414" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "HSR", "eco_id": "ECO_0000259", "start_pos": 19, "end_pos": 135, "start_aa": "Leu", "end_aa": "Thr", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A287BAR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BAR6" }, { "id": "PS50016", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50016" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PHD-type", "eco_id": "ECO_0000259", "start_pos": 498, "end_pos": 544, "start_aa": "Ser", "end_aa": "Arg", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A287BAR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BAR6" }, { "id": "PS50864", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50864" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SAND", "eco_id": "ECO_0000259", "start_pos": 403, "end_pos": 484, "start_aa": "Asp", "end_aa": "Ile", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B9A3-1", "uniprot_ac": "A0A287B9A3", "uniprot_id": "A0A287B9A3_PIG", "mass": { "chemical_mass": 65794.0, "monoisotopic_mass": 65794.0 }, "refseq": { "ac": "XP_020937139", "name": "HMG domain-containing protein 4 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020937139" }, "gene_names": [ { "name": "HMGXB4", "type": "recommended", "evidence": [ { "id": "A0A287B9A3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B9A3" } ] }, { "name": "HMGXB4", "type": "synonym", "evidence": [ { "id": "XP_020937139", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020937139" } ] } ], "protein_names": [ { "name": "High mobility group protein 2-like 1", "type": "recommended", "evidence": [ { "id": "A0A287B9A3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B9A3/entry#names_and_taxonomy" } ] }, { "name": "HMG domain-containing protein 4 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020937139", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020937139" } ] } ], "function": [ { "annotation": "Negatively regulates Wnt/beta-catenin signaling during development.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZN17", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN17#function" }, { "database": "UniProtKB", "id": "ARBA00058884", "url": "https://www.uniprot.org/uniprotkb/ARBA00058884#function" }, { "database": "UniProtKB", "id": "A0A287B9A3", "url": "https://www.uniprot.org/uniprotkb/A0A287B9A3#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B9A3", "url": "https://www.uniprot.org/uniprotkb/A0A287B9A3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "HMGXB4", "url": "https://www.uniprot.org/uniprotkb/A0A287B9A3", "locus": {} } ], "crossref": [ { "id": "ENSSSCG00000025780", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000025780", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd21982", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd21982", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100621900", "url": "https://www.ncbi.nlm.nih.gov/gene/100621900", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR009071", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009071", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR025228", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025228", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036910", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036910", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042477", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042477", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048016", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048016", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "HKSVERS", "url": "https://omabrowser.org/oma/group/HKSVERS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR46584", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46584", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46584:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46584:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00505", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00505", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13775", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13775", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020937139", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020937139", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZN17", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN17", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZN17-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN17-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9A3", "url": "https://www.uniprot.org/uniprotkb/A0A287B9A3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9A3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9A3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAYDDSVKKEDCFDGDHSFEDIGLAAGRSQREKKRSYKDFLREEEEIAAQVRNSSKKKLKDSELYFLGTDTHKKKRKHSSDDFYYGDISSLESSQKKKKKSSPQSADTAMDLLKAITSPLATSTKPSKKTGEKSSSSSSHSESKKEHHRKKVSGGSGDLSLEDGGSHRSKKMKPLYVNTETLTLREPDGLKMKLILSPKEKGSSSLDEESFQYPSQQATVKKSSKKSARDEQGALLLGHELQSFLKTARKKHRSSSDPRSSPGPEGCGPDASQFPESHSANLDLSGLEPILVESDSSSGGELEAGELVIDDSYREIKKKKKSKKSKKKKDKEKHKEKRHSKSKRSSGLPATAVGEVPAPPAPPPSLPYTGAAAPPLPLPGLQADGHSEKKKKREEKDKDRERGEKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYLQHKQNKAEATTVKRKASSSEGSMKMKASAAGVLSPQKKSPPTTMLLPASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLTTQLPELNGCPKQVLSNTLDNIAYIMPGL", "length": 601, "header": "tr|A0A287B9A3-1|A0A287B9A3_PIG Isoform 1 of High mobility group protein 2-like 1 OS=Sus scrofa OX=9823 GN=HMGXB4 PE=4 SV=1 CANONICAL=A0A287B9A3-1" }, "isoforms": [ { "isoform_ac": "A0A286ZN17-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN17/entry", "sequence": { "sequence": "MNLCFSDCFDGDHSFEDIGLAAGRSQREKKRSYKDFLREEEEIAAQVRNSSKKKLKDSELYFLGTDTHKKKRKHSSDDFYYGDISSLESSQKKKKKSSPQSADTAMDLLKAITSPLATSTKPSKKTGEKSSSSSSHSESKKEHHRKKVSGGSGDLSLEDGGSHRSKKMKPLYVNTETLTLREPDGLKMKLILSPKEKGSSSLDEESFQYPSQQATVKKSSKKSARDEQGALLLGHELQSFLKTARKKHRSSSDPRSSPGPEGCGPDASQFPESHSANLDLSGLEPILVESDSSSGGELEAGELVIDDSYREIKKKKKSKKSKKKKDKEKHKEKRHSKSKRSSGLPATAVGEVPAPPAPPPSLPYTGAAAPPLPLPGLQADGHSEKKKKREEKDKDRERGEKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYLQHKQNKAEATTVKRKASSSEGSMKMKASAAGVLSPQKKSPPTTMLLPASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLTTQLPELNGCPKQVLSNTLDNIAYIMPGL", "length": 597, "header": "tr|A0A286ZN17-1|A0A287B9A3_PIG Computationally mapped isoform of High mobility group protein 2-like 1 OS=Sus scrofa OX=9823 GN=HMGXB4 PE=4 SV=3 CANONICAL=A0A287B9A3-1" }, "locus": { "chromosome": "AEMK02000361.1", "start_pos": 1845179, "end_pos": 1824725, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050316.3", "url": "https://www.ensembl.org/id/ENSSSCT00000050316.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032846.3", "url": "https://www.ensembl.org/id/ENSSSCP00000032846.3" } ] } }, { "isoform_ac": "A0A287B9A3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9A3/entry", "sequence": { "sequence": "MAYDDSVKKEDCFDGDHSFEDIGLAAGRSQREKKRSYKDFLREEEEIAAQVRNSSKKKLKDSELYFLGTDTHKKKRKHSSDDFYYGDISSLESSQKKKKKSSPQSADTAMDLLKAITSPLATSTKPSKKTGEKSSSSSSHSESKKEHHRKKVSGGSGDLSLEDGGSHRSKKMKPLYVNTETLTLREPDGLKMKLILSPKEKGSSSLDEESFQYPSQQATVKKSSKKSARDEQGALLLGHELQSFLKTARKKHRSSSDPRSSPGPEGCGPDASQFPESHSANLDLSGLEPILVESDSSSGGELEAGELVIDDSYREIKKKKKSKKSKKKKDKEKHKEKRHSKSKRSSGLPATAVGEVPAPPAPPPSLPYTGAAAPPLPLPGLQADGHSEKKKKREEKDKDRERGEKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYLQHKQNKAEATTVKRKASSSEGSMKMKASAAGVLSPQKKSPPTTMLLPASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLTTQLPELNGCPKQVLSNTLDNIAYIMPGL", "length": 601, "header": "tr|A0A287B9A3-1|A0A287B9A3_PIG Isoform 1 of High mobility group protein 2-like 1 OS=Sus scrofa OX=9823 GN=HMGXB4 PE=4 SV=1 CANONICAL=A0A287B9A3-1" }, "locus": { "chromosome": "AEMK02000361.1", "start_pos": 1845179, "end_pos": 1824073, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000057495.3", "url": "https://www.ensembl.org/id/ENSSSCT00000057495.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053065.1", "url": "https://www.ensembl.org/id/ENSSSCP00000053065.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZN17", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN17" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0AAA9TCI2-1", "protein_name": "High mobility group protein 2-like 1", "gene_name": "HMGXB4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVVLGALCSNNLCDCFDGDHSFEDIGLAAGRSQREKKRSYKDFLREEEEIAAQVRNSSKKKLKDSELYFLGTDTHRKKRKHSSDDYYYGDISSLEPSQKKKKKSSPQSADTAMDLLKAITSPLATGAKPSKKIGEKSSSSSSHSESKKEHHRKKVSGSSGELSLEDGSSHKSKKMKPLYVNTETLTLREPDGLKMKLILSPKEKGSSSVDEESFQYPSQQGTVKKSSKKSARDEQGALLLGHELQSFLKTARKKHKSSSDPRSSPGPEGCGSEASQFPESHSANLDLSGLEPILVESDSSSGGELEAGELVIDDSYREIKKKKKSKKSKKKKDKEKHKEKRHSKSKRSSGLPPAAVAGEVPVPPVPAPSLPYAGAPTPPPPLPSLHTDGHNEKKKKREEKDRERDRGEKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLVWKQKAQYLQHKQNKAEATTVKRKASSSEGSMKVKASSMGVLSPQKKSPPTAMLLPASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLTTQLPELNGCPKQVLSNTLDNIAYIMPGL", "length": 605 }, "evidence": [ { "id": "A0A287B9A3", "url": "https://omabrowser.org/oma/group/A0A287B9A3/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0ABK0LC40-1", "protein_name": "High mobility group protein 2-like 1", "gene_name": "Hmgxb4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSTLRHEITPVKLIVLPASSTPVNAQTEGGADKALLCSSQPLDYLEFPPGRLLLHSDFTLQEGFPCLFLRPGPVDGKEPGHSDTAHSQRPCRTTMAYDDSMKKEDCFDGDHSFEDIGLAAGRSQREKKRSYKDFLREEEEVAAQVRSSSKKKSKDSDLFFLGTDTHKKKRKHSPDDFYYGDISTLESSQKKKKKSSPQSPDTAMDLLKAITSPLAAGAKSSKKAGEKSCSSSSHSESRKEHHKKKGNGSTGEPSLDDSNAHKPKRMKPLYVNTETLTLREPDGLKMRLILSPKEKGSSSVEEEAFQYPAQQASLKKPSKKLAREEQGALLLGHELQSLLKTARKKHKSSSDSHSSPGPEGCGSDGSQLPEPHSANLDITGLDPILVESESSSAGELEAGELVIDDSYREIKKKKKSKKSKKKKDKDRHKEKRHSRTKRSSTREHGTAREHMLVSSPASSIPTLPLPALHTDGHGEKKKKKEEKDRERERGEKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYLQHKQNKAEATTVKRKASSAEGTMKVRASSVGILSPQKKSPPTTMLLPASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLTTQLPELNGCPKQVLSNTLDNIAYIMPGL", "length": 688 }, "evidence": [ { "id": "A0A287B9A3", "url": "https://omabrowser.org/oma/group/A0A287B9A3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9UGU5-1", "protein_name": "HMG domain-containing protein 4", "gene_name": "HMGXB4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAYDDSVKKEDCFDGDHTFEDIGLAAGRSQREKKRSYKDFLREEEEIAAQVRNSSKKKLKDSELYFLGTDTHKKKRKHSSDDYYYGDISSLESSQKKKKKSSPQSTDTAMDLLKAITSPLAAGSKPSKKTGEKSSGSSSHSESKKEHHRKKVSGSSGELPLEDGGSHKSKKMKPLYVNTETLTLREPDGLKMKLILSPKEKGSSSVDEESFQYPSQQATVKKSSKKSARDEQGALLLGHELQSFLKTARKKHKSSSDAHSSPGPEGCGSDASQFAESHSANLDLSGLEPILVESDSSSGGELEAGELVIDDSYREIKKKKKSKKSKKKKDKEKHKEKRHSKSKRSLGLSAVPVGEVTVTSGPPPSIPYAGAAAPPLPLPGLHTDGHSEKKKKKEEKDKERERGEKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYLQHKQNKAEATTVKRKASSSEGSMKVKASSVGVLSPQKKSPPTTMLLPASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLTTQLPELNGCPKQVLSNTLDNIAYIMPGL", "length": 601 }, "evidence": [ { "id": "A0A287B9A3", "url": "https://omabrowser.org/oma/group/A0A287B9A3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A287B9A3", "url": "https://www.uniprot.org/uniprotkb/A0A287B9A3" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "A0A287B9A3", "url": "https://www.uniprot.org/uniprotkb/A0A287B9A3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A287B9A3", "url": "https://www.uniprot.org/uniprotkb/A0A287B9A3" } ], "pmid": "" }, { "name": "NURF complex", "id": "GO:0016589", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016589", "evidence": [ { "database": "UniProtKB", "id": "A0A287B9A3", "url": "https://www.uniprot.org/uniprotkb/A0A287B9A3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "Wnt signaling pathway", "id": "GO:0016055", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016055", "evidence": [ { "database": "UniProtKB", "id": "A0A287B9A3", "url": "https://www.uniprot.org/uniprotkb/A0A287B9A3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 410, "end_pos": 412, "annotation": "n_glycosylation_sequon" }, { "start_pos": 53, "end_pos": 55, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287B9A3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B9A3" }, { "id": "PS50118", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50118" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "HMG box", "eco_id": "ECO_0000259", "start_pos": 407, "end_pos": 475, "start_aa": "Lys", "end_aa": "Val", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 410, "end_pos": 412 }, { "start_pos": 53, "end_pos": 55 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"https://www.ncbi.nlm.nih.gov/protein/XP_001925589" }, "gene_names": [ { "name": "GALK2", "type": "recommended", "evidence": [ { "id": "A0A287BB25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BB25" } ] }, { "name": "GALK2", "type": "synonym", "evidence": [ { "id": "XP_001925589", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001925589" } ] } ], "protein_names": [ { "name": "N-acetylgalactosamine kinase", "type": "recommended", "evidence": [ { "id": "A0A287BB25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BB25/entry#names_and_taxonomy" } ] }, { "name": "2.7.1.157", "type": "synonym", "evidence": [ { "id": "A0A287BB25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BB25/entry#names_and_taxonomy" } ] }, { "name": "GalNAc kinase", "type": "synonym", "evidence": [ { "id": "A0A287BB25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BB25/entry#names_and_taxonomy" } ] }, { "name": "Galactokinase 2", "type": "synonym", "evidence": [ { "id": "A0A287BB25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BB25/entry#names_and_taxonomy" } ] }, { "name": "N-acetylgalactosamine kinase isoform X1", "type": "synonym", "evidence": [ { "id": "XP_001925589", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001925589" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BB25", "url": "https://www.uniprot.org/uniprotkb/A0A287BB25" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GALK2", "url": "https://www.uniprot.org/uniprotkb/A0A287BB25", "locus": { "chromosome": "1", "start_pos": 122369545, "end_pos": 122542222, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004651", "url": "https://www.ensembl.org/id/ENSSSCG00000004651" } ] } } ], "crossref": [ { "id": "ENSSSCG00000004651", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004651", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100152312", "url": "https://www.ncbi.nlm.nih.gov/gene/100152312", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000705", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000705", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006203", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006203", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006204", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006204", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006206", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006206", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013750", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013750", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014721", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014721", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019539", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019539", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019741", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019741", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020568", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020568", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036554", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036554", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100152312", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152312", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "GFHDTYF", "url": "https://omabrowser.org/oma/group/GFHDTYF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287BB25", "url": "https://www.orthodb.org/?gene=A0A287BB25", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10457", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10457", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10457:SF7", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10457:SF7", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00288", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00288", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08544", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08544", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF10509", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10509", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_001925589", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001925589", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "12617", "url": "https://www.rhea-db.org/rhea/12617", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZPC6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPC6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZPC6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPC6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B060", "url": "https://www.uniprot.org/uniprotkb/A0A287B060", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B060-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B060-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BB25", "url": "https://www.uniprot.org/uniprotkb/A0A287BB25", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BB25-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BB25-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BCX7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCX7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BCX7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCX7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QE04", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE04", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QE04-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE04-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQG6", "url": "https://www.uniprot.org/uniprotkb/F1SQG6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQG6-1", "url": "https://www.uniprot.org/uniprotkb/F1SQG6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MATEGPPVHQVQVAEHPRLLKLKEIFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDMLIAVEPVKTHTLQLANTNPLYPDFNTSADNIQIDKTKPLWHNYFLCGFKGIQEHFGLSNLIGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGMNLSKVELAEICAKSERYIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFNIRVMECRLAAKLLAKHRSLQWDKVLRLEEVQAKLGVSLEEMLLITEDTLHPEPYSPEEVCQCLGISLQELKTQILSPNTQDVLTFKLYQRAKHVYSEAARVLQFKKICEEAPDDMVQLLGELMNQSHVSCRDMYECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTVSIVLADKLPSFLANVHEAYYQKSGRSLAPEKQSLFATKPGGGALVFLEA", "length": 458, "header": "tr|A0A287BB25-1|A0A287BB25_PIG Isoform 1 of N-acetylgalactosamine kinase OS=Sus scrofa OX=9823 GN=GALK2 PE=1 SV=2 CANONICAL=A0A287BB25-1" }, "isoforms": [ { "isoform_ac": "A0A286ZPC6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPC6/entry", "sequence": { "sequence": "MATEGPPVHQVQVAEHPRLLKLKEIFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDMLIAVEPVKTHTLQLANTNPLYPDFNTSADNIQIDKTKPLWHNYFLCGFKGIQEHFGLSNLIGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGMNLSKAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFNIRVMECRLAAKLLAKHRSLQWDKVLRLEEVQAKLGVSLEEMLLITEDTLHPEPYSPEEVCQCLGISLQELKTQILSPNTQDVLTFKLYQRAKHVYSEAARVLQFKKICEEAPDDMVQLLGELMNQSHVSCRDMYECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTVSIVLADKLPSFLANVHEAYYQKSGRSLAPEKQSLFATKPGGGALVFLEA", "length": 425, "header": "tr|A0A286ZPC6-1|A0A287BB25_PIG Computationally mapped isoform of N-acetylgalactosamine kinase OS=Sus scrofa OX=9823 GN=GALK2 PE=1 SV=1 CANONICAL=A0A287BB25-1" }, "locus": { "chromosome": "1", "start_pos": 122526586, "end_pos": 122373857, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062092.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062092.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033469.1", "url": "https://www.ensembl.org/id/ENSSSCP00000033469.1" } ] } }, { "isoform_ac": "A0A287B060-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B060/entry", "sequence": { "sequence": "MATEGPPVHQVQVAEHPRLLKLKEIFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDMLIAVEPVKTHTLQLANTNPLYPDFNTSADNIQIDKTKPLWHNYFLCGFKGIQEHFGLSNLIGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGMNLSKVELAEICAKSERYIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFNIRVMECRLAAKLLAKHRSLQWDKVLRLEEVCQCLGISLQELKTQILSPNTQDVLTFKLYQRAKHVYSEAARVLQFKKICEEAPDDMVQLLGELMNQSHVSCRDMYECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTVSIVLADKLPSFLANVHEAYYQKSGRSLAPEKQSLFATKPGGGALVFLEA", "length": 429, "header": "tr|A0A287B060-1|A0A287BB25_PIG Computationally mapped isoform of N-acetylgalactosamine kinase OS=Sus scrofa OX=9823 GN=GALK2 PE=1 SV=1 CANONICAL=A0A287BB25-1" }, "locus": { "chromosome": "1", "start_pos": 122526586, "end_pos": 122373857, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058629.1", "url": "https://www.ensembl.org/id/ENSSSCT00000058629.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049600.1", "url": "https://www.ensembl.org/id/ENSSSCP00000049600.1" } ] } }, { "isoform_ac": "A0A287BB25-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BB25/entry", "sequence": { "sequence": "MATEGPPVHQVQVAEHPRLLKLKEIFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDMLIAVEPVKTHTLQLANTNPLYPDFNTSADNIQIDKTKPLWHNYFLCGFKGIQEHFGLSNLIGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGMNLSKVELAEICAKSERYIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFNIRVMECRLAAKLLAKHRSLQWDKVLRLEEVQAKLGVSLEEMLLITEDTLHPEPYSPEEVCQCLGISLQELKTQILSPNTQDVLTFKLYQRAKHVYSEAARVLQFKKICEEAPDDMVQLLGELMNQSHVSCRDMYECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTVSIVLADKLPSFLANVHEAYYQKSGRSLAPEKQSLFATKPGGGALVFLEA", "length": 458, "header": "tr|A0A287BB25-1|A0A287BB25_PIG Isoform 1 of N-acetylgalactosamine kinase OS=Sus scrofa OX=9823 GN=GALK2 PE=1 SV=2 CANONICAL=A0A287BB25-1" }, "locus": { "chromosome": "1", "start_pos": 122526586, "end_pos": 122373857, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046303.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046303.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053307.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053307.2" } ] } }, { "isoform_ac": "A0A287BCX7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCX7/entry", "sequence": { "sequence": "MATEGPPVHQVQVAEHPRLLKLKEIFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDMLIAVEPVKTHTLQLANTNPLYPDFNTSADNIQIDKTKPLWHNYFLCGFKGIQEHFGLSNLIGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGMNLSKVELAEICAKSERYIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFNIRVMECRLAAKLLAKHRSLQWDKVLRLEEVQAKLGVSLEEMLLITEDTLHPEPYSPEEVCQCLGISLQELKTQILSPNTQDVLTFKLYQRAKHVYSEAARVLQFKKICEEAPDDMVQLLGELMNQSHVSCRDMYECSCPELDQLVDICRFKALMLAALTVEACSV", "length": 406, "header": "tr|A0A287BCX7-1|A0A287BCX7_PIG Computationally mapped isoform of Galactokinase 2 OS=Sus scrofa OX=9823 GN=GALK2 PE=1 SV=1 CANONICAL=A0A287BB25-1" }, "locus": { "chromosome": "1", "start_pos": 122526586, "end_pos": 122392468, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042027.3", "url": "https://www.ensembl.org/id/ENSSSCT00000042027.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053946.1", "url": "https://www.ensembl.org/id/ENSSSCP00000053946.1" } ] } }, { "isoform_ac": "A0A5G2QE04-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE04/entry", "sequence": { "sequence": "MPIPCDRLLKLKEIFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDMLIAVEPVKTHTLQLANTNPLYPDFNTSADNIQIDKTKPLWHNYFLCGFKGIQEHFGLSNLIGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGMNLSKVELAEICAKSERYIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFNIRVMECRLAAKLLAKHRSLQWDKVLRLEEVQAKLGVSLEEMLLITEDTLHPEPYSPEEVCQCLGISLQELKTQILSPNTQDVLTFKLYQRAKHVYSEAARVLQFKKICEEAPDDMVQLLGELMNQSHVSCRDMYECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTVSIVLADKLPSFLANVHEAYYQKSGRSLAPEKQSLFATKPGGGALVFLEA", "length": 447, "header": "tr|A0A5G2QE04-1|A0A287BB25_PIG Computationally mapped isoform of N-acetylgalactosamine kinase OS=Sus scrofa OX=9823 GN=GALK2 PE=1 SV=1 CANONICAL=A0A287BB25-1" }, "locus": { "chromosome": "1", "start_pos": 122542007, "end_pos": 122373857, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087933.2", "url": "https://www.ensembl.org/id/ENSSSCT00000087933.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062878.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062878.1" } ] } }, { "isoform_ac": "F1SQG6-1", "url": "https://www.uniprot.org/uniprotkb/F1SQG6/entry", "sequence": { "sequence": "MRLLKLKEIFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDMLIAVEPVKTHTLQLANTNPLYPDFNTSADNIQIDKTKPLWHNYFLCGFKGIQEHFGLSNLIGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGMNLSKVELAEICAKSERYIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFNIRVMECRLAAKLLAKHRSLQWDKVLRLEEVQAKLGVSLEEMLLITEDTLHPEPYSPEEVCQCLGISLQELKTQILSPNTQDVLTFKLYQRAKHVYSEAARVLQFKKICEEAPDDMVQLLGELMNQSHVSCRDMYECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTVSIVLADKLPSFLANVHEAYYQKSGRSLAPEKQSLFATKPGGGALVFLEA", "length": 442, "header": "tr|F1SQG6-1|A0A287BB25_PIG Computationally mapped isoform of N-acetylgalactosamine kinase OS=Sus scrofa OX=9823 GN=GALK2 PE=1 SV=3 CANONICAL=A0A287BB25-1" }, "locus": { "chromosome": "1", "start_pos": 122533636, "end_pos": 122373857, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005136.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005136.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005011.4", "url": "https://www.ensembl.org/id/ENSSSCP00000005011.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QE04", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE04" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152312", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152312", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Z171-1", "protein_name": "N-acetylgalactosamine kinase", "gene_name": "GALK2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAADAPSTVPVQLVEQPRLLKLKESFIAKFGSAPKFYVRAPGRVNLIGEHIDYCGYAVLPMAIEQDILIAVEPVKTEVVQLANINSSYLDFSTSVNNIQINKSKPQWHNYFLCGLKGIQEHFGLNNPTGMNCLLDGTIPPSSGLSSSSALVCCAGLVTLKANGKTLSKVELAEICTKSERYIGTEGGGMDQSISFLAEEGTAKLIEFRPLRATDVRLPSGAAFVIANSCVEMNKAATSHYNIRVMECRLATKLLSKSKSLDWKKMLRLQDVQASLGVSLEEMLTIVEEVLHPEPYSTEEICKCLGISLEDLRSQILSQNTQNVSTFKLYQRAKHVYSEAARVLEFKKICSEAPDNAIQLLGELMNQSYISCKEMYECSCPELDRLVDICLQFGAIGSRLTGAGWGGCTVSMVPTDKLNTFLKNVKKAYYQNDGQRLALENNGLFATKPGRGALVFVEA", "length": 458 }, "evidence": [ { "id": "A0A287BB25", "url": "https://omabrowser.org/oma/group/A0A287BB25/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E7FDP4-1", "protein_name": "N-acetylgalactosamine kinase", "gene_name": "galk2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MATNPPKVKVLLSGNERLQKLKAAFRDKYGQMPLFYACAPGRVNLIGEHIDYCGYAVLPMAIEQSILAAVSVSDTKTIQLTNTDPKYKDFAVSADAISIDRENPQWHYYFLCGVKGLQEHLSLSSLAGMCCVVDGTIPASSGLSSSSALVCCAGLLAMEANHRSLSKVTLAEMCAKCERYIGTEGGGMDQSISFLAEEGTAKLIEFNPLRATDVKLPDGAVFVIANCCVEMNKAASSHFNMRVVECRLATKMLAKARGLDWRRLLKLGDLQKELRVSLEEMLELLEELLHPEPYSREEICRSLGITDQQLGEDILSANTQHATHFKLYQRARHVYGEAARVLQFKAVCDSSPASAITQLGDLMKQSHGSCRDLYECSCPELDQLVDICLQAGAVGSRLTGAGWGGCTVSMVPGERIDSFLQTVRERYYMPDARRAALEKQSLFVTRPGGGAAIYIEE", "length": 457 }, "evidence": [ { "id": "A0A287BB25", "url": "https://omabrowser.org/oma/group/A0A287BB25/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "P04385-1", "protein_name": "Galactokinase", "gene_name": "GAL1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTKSHSEEVIVPEFNSSAKELPRPLAEKCPSIIKKFISAYDAKPDFVARSPGRVNLIGEHIDYCDFSVLPLAIDFDMLCAVKVLNEKNPSITLINADPKFAQRKFDLPLDGSYVTIDPSVSDWSNYFKCGLHVAHSFLKKLAPERFASAPLAGLQVFCEGDVPTGSGLSSSAAFICAVALAVVKANMGPGYHMSKQNLMRITVVAEHYVGVNNGGMDQAASVCGEEDHALYVEFKPQLKATPFKFPQLKNHEISFVIANTLVVSNKFETAPTNYNLRVVEVTTAANVLAATYGVVLLSGKEGSSTNKGNLRDFMNVYYARYHNISTPWNGDIESGIERLTKMLVLVEESLANKKQGFSVDDVAQSLNCSREEFTRDYLTTSPVRFQVLKLYQRAKHVYSESLRVLKAVKLMTTASFTADEDFFKQFGALMNESQASCDKLYECSCPEIDKICSIALSNGSYGSRLTGAGWGGCTVHLVPGGPNGNIEKVKEALANEFYKVKYPKITDAELENAIIVSKPALGSCLYEL", "length": 528 }, "evidence": [ { "id": "A0A287BB25", "url": "https://omabrowser.org/oma/group/A0A287BB25/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q01415-1", "protein_name": "N-acetylgalactosamine kinase", "gene_name": "GALK2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATESPATRRVQVAEHPRLLKLKEMFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDVLIAVEPVKTYALQLANTNPLYPDFSTSANNIQIDKTKPLWHNYFLCGLKGIQEHFGLSNLTGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSERYIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFNIRVMECRLAAKLLAKYKSLQWDKVLRLEEVQAKLGISLEEMLLVTEDALHPEPYNPEEICRCLGISLEELRTQILSPNTQDVLIFKLYQRAKHVYSEAARVLQFKKICEEAPENMVQLLGELMNQSHMSCRDMYECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTVSMVPADKLPSFLANVHKAYYQRSDGSLAPEKQSLFATKPGGGALVLLEA", "length": 458 }, "evidence": [ { "id": "A0A287BB25", "url": "https://omabrowser.org/oma/group/A0A287BB25/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q54DN6-1", "protein_name": "Galactokinase", "gene_name": "galK", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDSFNPALPSIVESLDDIYKNFENNKKRYEELNETFSKIYNGDKPIFYFRAPGRVNLIGEHVDYSGYCVLPFALEQDTIVAVSFNKLNNDIINIHNCNEKYTPKSIDVSGGGDIEIDMKRHHWTNYVLAAWKGVSQAMEKGGKLKSVNLLYSGNVPMGAGVSSSSALVCVSTLAISYCNNLILNKEELAQLSIKSERYVGVESGGMDQSISFLAEQNTAKLIEFHPSLKTFDVQLPKGVSFVICNSLVDSLKVVTGATNYNLRVVECRLAAVLLAFHCGLSWEKVRRLRDVQYQGNFDLPQLIQLTEQHLSEKQTYTREEVATILDISVEQLVKTYFPSGITVQSEHFELYKRARHVFTETQRVYKFSEICKQQSNFNNNNNNNNNNSSNNTNIIQELGKLMNESHESCSKLFECSCSELDSLTKICRENGALGSRLTGAGWGGCVISLVPNSKVDSFLDAIDTHYYSKFVNPEKLKNIEKSSYSFFTTPCKGACIVSSTV", "length": 501 }, "evidence": [ { "id": "A0A287BB25", "url": "https://omabrowser.org/oma/group/A0A287BB25/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q5XIG6-1", "protein_name": "N-acetylgalactosamine kinase", "gene_name": "Galk2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAEDPATRRVQVAEHPRLLKLKEMFNSKFGSTPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDMLIAVGPVKTQTLQLANTDPLYPDFSTTANNICIDKTQPLWHNYFLCGFKGIQEHFGLTQLPGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGMRLSKVELAEICAKSERYIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFNVRVMECRLAAKVLAKHKGLQWDKVLRLEEVQSELGISLEEMLLVTEDALHAEPYSREEICKCLGISLEELRTQILSPNTQGELTFKLYQRAKHVYSEAARVLQFKQVCEAAPDNAVQLLGELMNQSHRSCRDMYECSCPELDQLVDICRKFGAKGSRLTGAGWGGCTVSLVPADTLSSFLASVHEAYYQGNMSRLAREKHSLFATKPGGGALVFLEA", "length": 458 }, "evidence": [ { "id": "A0A287BB25", "url": "https://omabrowser.org/oma/group/A0A287BB25/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q68FH4-1", "protein_name": "N-acetylgalactosamine kinase", "gene_name": "Galk2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAEDPATRRVQVAEHPRLLKLKEMFNSKFGSTPKFYVRAPGRVNIIGEHIDYCGYSVIPMAVEQDMLIAVEPVKTHTLQLANTDPLYPDFSTTANNICIDKTKPLWHNYFLCGFKGIQEHFGLSKLPGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGLRLSKVELAEICAKSERYIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATNVKLPSGAVFVIANSCMEMNKAATSHFNVRVMECRLAAKVLAKHKGLQWDNVLRLEEVQSKLGISLEEMLLVTEDALHPEPYSREEICRCLGISLERLRTQILTPNTQDELTFKLYQRAKHVYSEAARVLQFKQVCEDAPDNAVQLLGELMNQSHRSCRDMYECSCPELDQLVDICRKFGAKGSRLTGAGWGGCTVSLVPADMLSSFLASVHEAYYQGNTSRLAQEKHSLFATKPGGGALVFREV", "length": 458 }, "evidence": [ { "id": "A0A287BB25", "url": "https://omabrowser.org/oma/group/A0A287BB25/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9SEE5-1", "protein_name": "Galactokinase", "gene_name": "GAL1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAKPEEVSVPIFTSLEPVYGEGSLLQEATQRFDVLKANFNDVFGASPQLFARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIIAIRKCEDQKQLRIANVNDKYTMCTYPADPDQEIDLKNHKWGHYFICAYKGFHEYAKSKGVNLGSPVGLDVLVDGIVPTGSGLSSSAAFVCSATIAIMAVFGHNFEKKELAQLTCECERHIGTQSGGMDQAISIMAKTGFAELIDFNPVRATDVKLPDGGSFVIAHSLAESQKAVTAAKNYNNRVVECRLASIILGVKLGMEPKEAISKVKTLSDVEGLCVSFAGDRGSSDPLLAVKEYLKEEPYTAEEIEKILEEKLPSIVNNDPTSLAVLNAATHFKLHQRAAHVYSEARRVHGFKDTVNSNLSDEEKLKKLGDLMNESHYSCSVLYECSCPELEELVQVCKENGALGARLTGAGWGGCAVALVKEFDVTQFIPAVKEKYYKKRVEKGVVKKEDMELYLFASKPSSGAAIFNL", "length": 496 }, "evidence": [ { "id": "A0A287BB25", "url": "https://omabrowser.org/oma/group/A0A287BB25/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB25", "url": "https://www.uniprot.org/uniprotkb/A0A287BB25" } ], "pmid": "" }, { "name": "galactokinase activity", "id": "GO:0004335", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004335", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB25", "url": "https://www.uniprot.org/uniprotkb/A0A287BB25" } ], "pmid": "" }, { "name": "N-acetylgalactosamine kinase activity", "id": "GO:0033858", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033858", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB25", "url": "https://www.uniprot.org/uniprotkb/A0A287BB25" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB25", "url": "https://www.uniprot.org/uniprotkb/A0A287BB25" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB25", "url": "https://www.uniprot.org/uniprotkb/A0A287BB25" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "galactose metabolic process", "id": "GO:0006012", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006012", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB25", "url": "https://www.uniprot.org/uniprotkb/A0A287BB25" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 165, "end_pos": 167, "annotation": "n_glycosylation_sequon" }, { "start_pos": 365, "end_pos": 367, "annotation": "n_glycosylation_sequon" }, { "start_pos": 92, "end_pos": 94, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "12617", "name": "", "equation": "N-acetyl-alpha-D-galactosamine + ATP = N-acetyl-alpha-D-galactosamine 1-phosphate + ADP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "12617", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/12617" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287BB25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BB25" }, { "id": "PF08544", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08544" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "GHMP kinase C-terminal", "eco_id": "ECO_0000259", "start_pos": 358, "end_pos": 427, "start_aa": "Gln", "end_aa": "Ala", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A287BB25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BB25" }, { "id": "PF00288", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00288" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "GHMP kinase N-terminal", "eco_id": "ECO_0000259", "start_pos": 109, "end_pos": 196, "start_aa": "Asn", "end_aa": "Leu", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A287BB25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BB25" }, { "id": "PF10509", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10509" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Galactokinase N-terminal", "eco_id": "ECO_0000259", "start_pos": 25, "end_pos": 73, "start_aa": "Ile", "end_aa": "Pro", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 165, "end_pos": 167 }, { "start_pos": 365, "end_pos": 367 }, { "start_pos": 92, "end_pos": 94 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287BBM7-1", "uniprot_ac": "A0A287BBM7", "uniprot_id": "A0A287BBM7_PIG", "mass": { "chemical_mass": 132317.0, "monoisotopic_mass": 132317.0 }, "refseq": {}, "gene_names": [ { "name": "SHANK2", "type": "recommended", "evidence": [ { "id": "A0A287BBM7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BBM7" } ] } ], "protein_names": [ { "name": "SH3 and multiple ankyrin repeat domains 2", "type": "synonym", "evidence": [ { "id": "A0A287BBM7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BBM7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BBM7", "url": "https://www.uniprot.org/uniprotkb/A0A287BBM7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SHANK2", "url": "https://www.uniprot.org/uniprotkb/A0A287BBM7", "locus": { "chromosome": "2", "start_pos": 3015314, "end_pos": 2864331, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000033043", "url": "https://www.ensembl.org/id/ENSSSCG00000033043" } ] } } ], "crossref": [ { "id": "A0A287BBM7", "url": "https://alphafold.ebi.ac.uk/entry/A0A287BBM7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000033043", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000033043", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd06746", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06746", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd09506", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd09506", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001478", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001478", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001660", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001660", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013761", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013761", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036034", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036034", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041489", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041489", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051569", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051569", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24135", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24135", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24135:SF17", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24135:SF17", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00536", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00536", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF17820", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17820", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZQI2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQI2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZQI2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQI2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B8J4", "url": "https://www.uniprot.org/uniprotkb/A0A287B8J4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B8J4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B8J4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BBM7", "url": "https://www.uniprot.org/uniprotkb/A0A287BBM7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BBM7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBM7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QQP7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQP7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QQP7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQP7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLMMNVPGGGPAAVMMMGHSNGRCPRNSLYSDCIIEEKTVVLQKKDNEGFGFVLRGAKADTPIEEFTPTPAFPALQYLESVDEGGVAWQAGLRTGDFLIEVNSENVVKVGHRQVVNMIRQGGNHLVLKVVTVTRSLDPDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELGKSPSVRKKKDKPDEIVPAPKPSRAAEAVVAETRVATIKQRPTSRCFPSVSDMNSVFERQGIAVMTPTVPGSPKGPFLGLPRGTMRRQKSIGITEEERQFLAPPMLKFTRSLSMPDTSEDIPPPPQAVPPSPPPPSPTAYNCPKSPTPRVYGTIKPAFNQNAAAKVSPAPRSDTVATMVREKGLYYRRELDRYSLDSEDLYSRAAAAAAQGTFRGKRGQMPENPYSEVGKIASKAVYVPAKPARRKGMLVKQSNVEDSPEKTCAIAIPTIIVKEPSTSSSGKSSQASSMEIDPQASEQPGQLRPDDSLTVSSPFAAAIAGAVRDREKRLEARRNSPAFLSTDLGDEDVGLGPPAEFGEEDGAEPLASPTPAAAPREAENHFAGGGEAGAQGEASRPLNPTSKAKGPEGSPAVPPKSSSTAGPENYVHPLTGRLLDPSSPLALALSARDRAMKESQQGPRGEAPKADLNKPLYIDTKMRPCTEAGFPPVTRQNTRGPLRRQETENKYETDRKDDKKGTLISIVDASQQKSAGLLMVHTVDAARPDDFLEEEDEKADEETEPDHLPSEVPEGVPETEGALPMPAGPEPAATAPSRTVTAAGSVEEAAILPFRIPPPPLASVDLDEDFIFTEPLPPPLEFANSFEIPDDRAAPVPVPTDLAKQEKNDASQSPSLPSSQPANSADAKKPAGLSNCLPASFLPPPESFDAVTDSGIEEVDSRSSSDHHLETTSTISTVSSISTLSSEGGENADTCTVYADGQAFMVDKPPVPPKPKMKPIVHKGNALFQDALLEEDVGSFVIPPPAPPPPPGAVQPGTTKVIQPRTSKLWGDVSEIKSPILSGPKANVISELNSILQQMNREKSAKPGAGLDLPTGTKPASLAPRGPEVMSSVSGSRSTTVTFTVRPGTSQPITLQSRPPDYESRTSGTRRAPSPVVSPTELSKEMLPAPLSAAAASPSPALSDVFGLPSQPPAGDLFGLNPAGRSRSPSPSILQQPISNKPFTAKPVHLWTKPDVADWLESLNLGEHKEAFMDNEIDGSHLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR", "length": 1241, "header": "tr|A0A287BBM7-1|A0A287BBM7_PIG Isoform 1 of SH3 and multiple ankyrin repeat domains 2 OS=Sus scrofa OX=9823 GN=SHANK2 PE=4 SV=2 CANONICAL=A0A287BBM7-1" }, "isoforms": [ { "isoform_ac": "A0A286ZQI2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQI2/entry", "sequence": { "sequence": "MMNVPGGGPAAVMMMGHSNGRCPRNSLYSDCIIEEKTVVLQKKDNEGFGFVLRGAKADTPIEEFTPTPAFPALQYLESVDEGGVAWQAGLRTGDFLIEVNSENVVKVGHRQVVNMIRQGGNHLVLKVVTVTRSLDPDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELGKNKPDEIVPAPKPSRAAEAVVAETRVATIKQRPTSRCFPSVSDMNSVFERQGIAVMTPTVPGSPKGPFLGLPRGTMRRQKSIGITEEERQFLAPPMLKFTRSLSMPDTSEDIPPPPQAVPPSPPPPSPTAYNCPKSPTPRVYGTIKPAFNQNAAAKVSPAPRSDTVATMVREKGLYYRRELDRYSLDSEDLYSRAAAAAAQGTFRGKRGQMPENPYSEVGKIASKAVYVPAKPARRKGMLVKQSNVEDSPEKTCAIAIPTIIVKEPSTSSSGKSSQASSMEIDPQASEQPGQLRPDDSLTVSSPFAAAIAGAVRDREKRLEARRNSPAFLSTDLGDEDVGLGPPAEFGEEDGAEPLASPTPAAAPREAENHFAGGGEAGAQGEASRPLNPTSKAKGPEGSPAVPPKSSSTAGPENYVHPLTGRLLDPSSPLALALSARDRAMKESQQGPRGEAPKADLNKPLYIDTKMRPCTEAGFPPVTRQNTRGPLRRQETENKYETDRKDDKKGTLISIVDASQQKSAGLLMVHTVDAARPDDFLEEEDEKADEETEPDHLPSEVPEGVPETEGALPMPAGPEPAATAPSRTVTAAGSVEEAAILPFRIPPPPLASVDLDEDFIFTEPLPPPLEFANSFEIPDDRAAPVPVPTDLAKQEKNDASQSPSLPSSQPANSADAKKPAGLSNCLPASFLPPPESFDAVTDSGIEEVDSRSSSDHHLETTSTISTVSSISTLSSEGGENADTCTVYADGQAFMVDKPPVPPKPKMKPIVHKGNALFQDALLEEDVGSFVIPPPAPPPPPGAVQPGTTKVIQPRTSKLWGDVSEIKSPILSGPKANVISELNSILQQMNREKSAKPGAGLDLPTGTKPASLAPRGPEVMSSVSGSRSTTVTFTVRPGTSQPITLQSRPPDYESRTSGTRRAPSPVVSPTELSKEMLPAPLSAAAASPSPALSDVFGLPSQPPAGDLFGLNPAGRSRSPSPSILQQPISNKPFTAKPVHLWTKPDVADWLESLNLGEHKEAFMDNEIDGSHLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR", "length": 1231, "header": "tr|A0A286ZQI2-1|A0A287BBM7_PIG Computationally mapped isoform of SH3 and multiple ankyrin repeat domains 2 OS=Sus scrofa OX=9823 GN=SHANK2 PE=4 SV=2 CANONICAL=A0A287BBM7-1" }, "locus": { "chromosome": "2", "start_pos": 3013675, "end_pos": 2864839, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037813.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037813.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033861.3", "url": "https://www.ensembl.org/id/ENSSSCP00000033861.3" } ] } }, { "isoform_ac": "A0A287B8J4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B8J4/entry", "sequence": { "sequence": "MMNVPGGGPAAVMMMGHSNGRCPRNSLYSDCIIEEKTVVLQKKDNEGFGFVLRGAKADTPIEEFTPTPAFPALQYLESVDEGGVAWQAGLRTGDFLIEVNSENVVKVGHRQVVNMIRQGGNHLVLKVVTVTRSLDPDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELGKTSVRKKKDKPDEIVPAPKPSRAAEAVVAETRVATIKQRPTSRCFPSVSDMNSVFERQGIAVMTPTVPGSPKGPFLGLPRGTMRRQKSIGITEEERQFLAPPMLKFTRSLSMPDTSEDIPPPPQAVPPSPPPPSPTAYNCPKSPTPRVYGTIKPAFNQNAAAKVSPAPRSDTVATMVREKGLYYRRELDRYSLDSEDLYSRAAAAAAQGTFRGKRGQMPENPYSEVGKIASKAVYVPAKPARRKGMLVKQSNVEDSPEKTCAIAIPTIIVKEPSTSSSGKSSQASSMEIDPQASEQPGQLRPDDSLTVSSPFAAAIAGAVRDREKRLEARRNSPAFLSTDLGDEDVGLGPPAEFGEEDGAEPLASPTPAAAPREAENHFAGGGEAGAQGEASRPLNPTSKAKGPEGSPAVPPKSSSTAGPENYVHPLTGRLLDPSSPLALALSARDRAMKESQQGPRGEAPKADLNKPLYIDTKMRPCTEAGFPPVTRQNTRGPLRRQETENKYETDRKDDKKGTLISIVDASQQKSAGLLMVHTVDAARPDDFLEEEDEKADEETEPDHLPSEVPEGVPETEGALPMPAGPEPAATAPSRTVTAAGSVEEAAILPFRIPPPPLASVDLDEDFIFTEPLPPPLEFANSFEIPDDRAAPVPVPTDLAKQEKNDASQSPSLPSSQPANSADAKKPAGLSNCLPASFLPPPESFDAVTDSGIEEVDSRSSSDHHLETTSTISTVSSISTLSSEGGENADTCTVYADGQAFMVDKPPVPPKPKMKPIVHKGNALFQDALLEEDVGSFVIPPPAPPPPPGAVQPGTTKVIQPRTSKLWGDVSEIKSPILSGPKANVISELNSILQQMNREKSAKPGAGLDLPTGTKPASLAPRGPEVMSSVSGSRSTTVTFTVRPGTSQPITLQSRPPDYESRTSGTRRAPSPVVSPTELSKEMLPAPLSAAAASPSPALSDVFGLPSQPPAGDLFGLNPAGRSRSPSPSILQQPISNKPFTAKPVHLWTKPDVADWLESLNLGEHKEAFMDNEIDGSHLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR", 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"length": 1241, "header": "tr|A0A287BBM7-1|A0A287BBM7_PIG Isoform 1 of SH3 and multiple ankyrin repeat domains 2 OS=Sus scrofa OX=9823 GN=SHANK2 PE=4 SV=2 CANONICAL=A0A287BBM7-1" }, "locus": { "chromosome": "2", "start_pos": 3013675, "end_pos": 2864794, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065006.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065006.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053924.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053924.2" } ] } }, { "isoform_ac": "A0A5G2QQP7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQP7/entry", "sequence": { "sequence": "MLMMNVPGGGPAAVMMMGHSNGRCPRNSLYSDCIIEEKTVVLQKKDNEGFGFVLRGAKADTPIEEFTPTPAFPALQYLESVDEGGVAWQAGLRTGDFLIEVNSENVVKVGHRQVVNMIRQGGNHLVLKVVTVTRSLDPDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELDKPDEIVPAPKPSRAAEAVVAETRVATIKQRPTSRCFPSVSDMNSVFERQGIAVMTPTVPGSPKGPFLGLPRGTMRRQKSIGKQRGRTRQGAPWLSTAPGDPALCPAPWSEAWRLYH", "length": 289, "header": "tr|A0A5G2QQP7-1|A0A287BBM7_PIG Computationally mapped isoform of SH3 and multiple ankyrin repeat domains 2 OS=Sus scrofa OX=9823 GN=SHANK2 PE=4 SV=1 CANONICAL=A0A287BBM7-1" }, "locus": { "chromosome": "2", "start_pos": 3001293, "end_pos": 2864794, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081464.1", "url": "https://www.ensembl.org/id/ENSSSCT00000081464.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067063.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067063.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 541, "start_aa": "Thr", "end_pos": 541, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr541", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 69, "start_aa": "Thr", "end_pos": 69, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr69", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QQP7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQP7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", 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"evidence": [ { "database": "UniProtKB", "id": "A0A287BD09", "url": "https://www.uniprot.org/uniprotkb/A0A287BD09" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "C19orf47", "url": "https://www.uniprot.org/uniprotkb/A0A287BD09", "locus": { "chromosome": "6", "start_pos": 48616681, "end_pos": 48645305, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000027016", "url": "https://www.ensembl.org/id/ENSSSCG00000027016" } ] } } ], "crossref": [ { "id": "ENSSSCG00000027016", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000027016", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd09531", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd09531", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100624888", "url": "https://www.ncbi.nlm.nih.gov/gene/100624888", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR013761", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013761", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039161", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039161", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040772", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040772", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041477", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041477", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100624888", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624888", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DHRIQKN", "url": "https://omabrowser.org/oma/group/DHRIQKN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287BD09", "url": "https://www.orthodb.org/?gene=A0A287BD09", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21359", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21359", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21359:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21359:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF17740", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17740", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18017", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18017", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003355961", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003355961", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZR36", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR36", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZR36-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR36-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BD09", "url": "https://www.uniprot.org/uniprotkb/A0A287BD09", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BD09-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BD09-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BH43", "url": "https://www.uniprot.org/uniprotkb/A0A287BH43", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BH43-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BH43-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVSVTMATSEWIQFFKEAGIPPGPAVNYAVMFVDNRIQKSMLLDLNKEIMNELGVTVVGDIIAILKHAKVVHRQDMCKAATESVPCGPSPLPGETRRGTSSAASRMITNSLNRDSPPGTPPRRPDTSTSKISVTVPNKMAAKSAKAAAALARCEEESLAVPTKRRRVTAEMEGKYIINMPKGTTPRTRKILEQQQAAKGLHRTSVFDRLGAETKADTTTGNKPTGVFSRLGATPEMDEDLAWDSDNDSSSSVLQYAGVLKKLGRAPAKASHQPTLTVKAKATSSAPTAATPTLRRLALSSRPGLEKKPEPLSKVSVIQRLGKTALVPEAQDSQVTSTKSKSSAEVKVTIKRTLVGPRGNSSSEGLGAQMDHAGTVSVFKRLGRRTF", "length": 386, "header": "tr|A0A287BD09-1|A0A287BD09_PIG Isoform 1 of Chromosome 6 C19orf47 homolog OS=Sus scrofa OX=9823 GN=C19orf47 PE=4 SV=2 CANONICAL=A0A287BD09-1" }, "isoforms": [ { "isoform_ac": "A0A286ZR36-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR36/entry", "sequence": { "sequence": "AAPSLVAPQRAREAASGVRLPAAPGSSVKARATMVSVTMATSEWIQFFKEAGIPPGPAVNYAVMFVDNRIQKSMLLDLNKEIMNELGVTVVGDIIAILKHAKVVHRQDMCKAATESVPCGPSPLPGETRRGTSSAASRMITNSLNRDSPPGTPPRRPDTSTSKISVTVPNKMAAKSAKAAAALARCEEESLAVPTKRRRVTAEMEGKYIINMPKGTTPRTRKILEQQQAAKGLHRTSVFDRLGAETKADTTTGNKPTGVFSRLGATPEMDEDLAWDSDNDSSSSVLQYAGVLKKLGRAPAKASHQPTLTVKAKATSSAPTAATPTLRRLALSSRPGLEKKPEPLSKVSVIQRLGKTALVPEAQDSQVTSTKSKSSAEVKVTIKRTLVGPRGNSSSEGLGAQMDHAGTVSVFKRLGRRTF", "length": 419, "header": "tr|A0A286ZR36-1|A0A287BD09_PIG Computationally mapped isoform of Chromosome 6 C19orf47 homolog OS=Sus scrofa OX=9823 GN=C19orf47 PE=4 SV=2 CANONICAL=A0A287BD09-1" }, "locus": { "chromosome": "6", "start_pos": 48645305, "end_pos": 48623635, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052233.2", "url": "https://www.ensembl.org/id/ENSSSCT00000052233.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034043.2", "url": "https://www.ensembl.org/id/ENSSSCP00000034043.2" } ] } }, { "isoform_ac": "A0A287BD09-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BD09/entry", "sequence": { "sequence": "MVSVTMATSEWIQFFKEAGIPPGPAVNYAVMFVDNRIQKSMLLDLNKEIMNELGVTVVGDIIAILKHAKVVHRQDMCKAATESVPCGPSPLPGETRRGTSSAASRMITNSLNRDSPPGTPPRRPDTSTSKISVTVPNKMAAKSAKAAAALARCEEESLAVPTKRRRVTAEMEGKYIINMPKGTTPRTRKILEQQQAAKGLHRTSVFDRLGAETKADTTTGNKPTGVFSRLGATPEMDEDLAWDSDNDSSSSVLQYAGVLKKLGRAPAKASHQPTLTVKAKATSSAPTAATPTLRRLALSSRPGLEKKPEPLSKVSVIQRLGKTALVPEAQDSQVTSTKSKSSAEVKVTIKRTLVGPRGNSSSEGLGAQMDHAGTVSVFKRLGRRTF", "length": 386, "header": "tr|A0A287BD09-1|A0A287BD09_PIG Isoform 1 of Chromosome 6 C19orf47 homolog OS=Sus scrofa OX=9823 GN=C19orf47 PE=4 SV=2 CANONICAL=A0A287BD09-1" }, "locus": { "chromosome": "6", "start_pos": 48638204, "end_pos": 48623635, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048686.3", "url": "https://www.ensembl.org/id/ENSSSCT00000048686.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054421.3", "url": "https://www.ensembl.org/id/ENSSSCP00000054421.3" } ] } }, { "isoform_ac": "A0A287BH43-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BH43/entry", "sequence": { "sequence": "MVSVTMATSEWIQFFKEAGIPPGPAVNYAVMFVDNRIQKSMLLDLNKEIMNELGVTVVGDIIAILKHAKVVHRQDMCKAATESVPCGPSPLPGETRRGTSSAASRMITNSLNRDSPPGTPPRRPDTSTSKISVTVPNKMAAKSAKAAAALARCEEESLAVPTKRRRVTAEMEGKYIINMPKGTTPRTRKILEQQQAAKGLHRTSVFDRLGAETKADTTTGNKPTGVFSRLGATPEMDEDLAWDSDNDSSSSVLQYAGVLKKLGRAPAKASHQPTLTVKAKATSSAPTAATPTLRRLALSSRPGLEKKPEPLSKVSVIQRLGKTALVPEAQDSQVTSTKSPTLRCVLPGAPAPPASQRPPRRRWRRACRDC", "length": 370, "header": "tr|A0A287BH43-1|A0A287BH43_PIG Computationally mapped isoform of Chromosome 6 C19orf47 homolog OS=Sus scrofa OX=9823 GN=C19orf47 PE=4 SV=1 CANONICAL=A0A287BD09-1" }, "locus": { "chromosome": "6", "start_pos": 48638204, "end_pos": 48623010, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050934.3", "url": "https://www.ensembl.org/id/ENSSSCT00000050934.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055852.1", "url": "https://www.ensembl.org/id/ENSSSCP00000055852.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 119, "start_aa": "Thr", "end_pos": 119, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr119", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZR36", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR36" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100624888", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624888", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0AAA9T506-1", "protein_name": "Chromosome 18 C19orf47 homolog", "gene_name": "C18H19orf47", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVSVTMATSEWIQFFKEAGIPPGPAVNYAVMFVDNRIQKSMLLDLNKEIMNELGVTVVGDIIAILKHAKVVHRQDMCKAATESVPCSPSPLPSEIRRGASSAASRMITNSLNRDSPPGTPPRRPDTSTSKISVTVSNKMAAKSAKAAALAHREEESLSVPTKRRRVTAEMEGKYIINMPKGTTPRTRKILEQQQAAKGLHRTSVFDRLGAETKADTTTGNKPTGVFSRLGATPETDEDLAWDSDNDSSSSSVLQYAGVLKKLGRAPAKASPQPALTVKAKATSSAPTAAAPTLRRLALSSRPAPERKPEALSKVSIIQRLGKPALVPEAQDSQVTSTKSKSSAEVKVTIKRTLVGPRGSSSTEGLGAQMDHAGTVSVFKRLGRRTF", "length": 386 }, "evidence": [ { "id": "A0A287BD09", "url": "https://omabrowser.org/oma/group/A0A287BD09/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0JPQ7-1", "protein_name": "Uncharacterized protein C19orf47 homolog", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGFRIRESLLLNLRKVPGSRVKARETMVSVTMATSEWIQFFKEAGIPPGPAVNYAVMFVDNRIQKSMLLDLNKEIMNELGVTVVGDIIAILKHAKVVHRQDMCKAATASVPCTPSPLQGELRRGASSAASRMIANSLNHDSPPHTPARRSDNSTSKISVTVSNKVAVKNAKAAALAHREEESLVVPTKRRRVTAEMEGKYIIHMPKGTTPRTRKILEQQQAAKGLHRTSVFDRLGAETKADTTTGTKPTGVFSRLGATPEMDEELAWDSDNDSSSSSVLQYAGVLKKLGRGPTKASPQPALTVKAKATSSATTLASTPKLRRLALPSRPGPEKKPESLPKVSILKRLGKAAVVSEAQDSQVTSTKSPTVRCIVPDPPAPLASQRPPRRRWRRTCKDC", "length": 397 }, "evidence": [ { "id": "A0A287BD09", "url": "https://omabrowser.org/oma/group/A0A287BD09/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8N9M1-1", "protein_name": "Uncharacterized protein C19orf47", "gene_name": "C19orf47", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVMAALSLVAACWGRAAADESVQLPAAPGSSVRARETMVSVTMATSEWIQFFKEAGIPPGPAVNYAVMFVDNRIQKSMLLDLNKEIMNELGVTVVGDIIAILKHAKVVHRQDMCKAATESVPCSPSPLAGEIRRGTSAASRMITNSLNHDSPPSTPPRRPDTSTSKISVTVSNKMAAKSAKATAALARREEESLAVPAKRRRVTAEMEGKYVINMPKGTTPRTRKILEQQQAAKGLHRTSVFDRLGAETKADTTTGSKPTGVFSRLGATPETDEDLAWDSDNDSSSSVLQYAGVLKKLGRGPAKASPQPALTVKAKATSSATTAAAPTLRRLALSSRSGLERKPESLSKVSIIKRLGAAALVPEAQDSQVTSTKSKSSAEVKVTIKRTLVGPRGSSSSEGLGAQMDHAGTVSVFKRLGRRTF", "length": 422 }, "evidence": [ { "id": "A0A287BD09", "url": "https://omabrowser.org/oma/group/A0A287BD09/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8R3Y5-1", "protein_name": "Uncharacterized protein C19orf47 homolog", "gene_name": "", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGFRIGKNLLFNLRKAPGSRVKARKTMVSVTMATSEWIQFFKEAGIPPGPAVNYAVMFVDNRIQKSMLLDLNKEIMNELGVTVVGDIIAILKHAKVVHRQDMCKAATESVPCNPSPLQGELRRGASSAASRMIANSLNHDSPPHTPTRRSDNSTSKISVTVSNKMAAKSAKAAALAHREEESLVVPTKRRRVTAEMEGKYIIHMPKGTTPRTRKILEQQQAAKGLHRTSVFDRLGAESKADTTTGTKPTGVFSRLGATPEMDEDLAWDSDNDSSSSSVLQYAGVLKKLGRGPTKASAQPALTVKAKAASSATSTATTPKLRRLALPSRPGLQKKPDSLPKVSILQRLGKAAVVSEAQDSQVTSTKSKSSAEVKFAIKRTLVGPRGSSSSESLGAQMDHAGTVSVFKRLGQRTF", "length": 413 }, "evidence": [ { "id": "A0A287BD09", "url": "https://omabrowser.org/oma/group/A0A287BD09/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A287BD09", "url": "https://www.uniprot.org/uniprotkb/A0A287BD09" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 246, "end_pos": 248, "annotation": "n_glycosylation_sequon" }, { "start_pos": 359, "end_pos": 361, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287BD09", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BD09" }, { "id": "PF17740", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17740" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DUF5577", "eco_id": "ECO_0000259", "start_pos": 93, "end_pos": 382, "start_aa": "Gly", "end_aa": "Gly", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 119 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 246, "end_pos": 248 }, { "start_pos": 359, "end_pos": 361 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287BDU4-1", "uniprot_ac": "A0A287BDU4", "uniprot_id": "A0A287BDU4_PIG", "mass": { "chemical_mass": 170614.0, "monoisotopic_mass": 170614.0 }, "refseq": { "ac": "XP_020920738", "name": "disco-interacting protein 2 homolog C isoform X6", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920738" }, "gene_names": [ { "name": "DIP2C", "type": "recommended", "evidence": [ { "id": "A0A287BDU4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BDU4" } ] }, { "name": "DIP2C", "type": "synonym", "evidence": [ { "id": "XP_020920738", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920738" } ] } ], "protein_names": [ { "name": "Disco interacting C", "type": "synonym", "evidence": [ { "id": "A0A287BDU4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BDU4/entry#names_and_taxonomy" } ] }, { "name": "disco-interacting protein 2 homolog C isoform X6", "type": "synonym", "evidence": [ { "id": "XP_020920738", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920738" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BDU4", "url": "https://www.uniprot.org/uniprotkb/A0A287BDU4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DIP2C", "url": "https://www.uniprot.org/uniprotkb/A0A287BDU4", "locus": { "chromosome": "10", "start_pos": 69141871, "end_pos": 68770164, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011163", "url": "https://www.ensembl.org/id/ENSSSCG00000011163" } ] } } ], "crossref": [ { "id": "ENSSSCG00000011163", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011163", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd05905", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd05905", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100739614", "url": "https://www.ncbi.nlm.nih.gov/gene/100739614", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000873", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000873", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR010506", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010506", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR025110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037337", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037337", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042099", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042099", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045851", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045851", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "LVWTYWT", "url": "https://omabrowser.org/oma/group/LVWTYWT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR22754", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22754", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22754:SF33", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22754:SF33", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00501", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00501", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF06464", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06464", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23024", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23024", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020920738", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920738", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZRB0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRB0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZRB0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRB0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B2G8", "url": "https://www.uniprot.org/uniprotkb/A0A287B2G8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B2G8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B2G8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BDU4", "url": "https://www.uniprot.org/uniprotkb/A0A287BDU4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BDU4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BDU4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BKC3", "url": "https://www.uniprot.org/uniprotkb/A0A287BKC3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BKC3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BKC3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJ75", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ75", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJ75-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ75-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F9V3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9V3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F9V3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9V3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FJS4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJS4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FJS4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJS4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FM60", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FM60", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FM60-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FM60-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RX45", "url": "https://www.uniprot.org/uniprotkb/F1RX45", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RX45-1", "url": "https://www.uniprot.org/uniprotkb/F1RX45-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MADRSLEGMALPLEVRARLAELELELSEGDITQKGYEKKRSKLIGAYLPQPPRVDQALPPERRAPVTPSSSSRYHRRRSSGSRDERYRSDVHTEAVQAALAKHKERKMAVPMPSKRRSLVVQTSMDAYTPPDTSSGSEDEGSVQGDSQGTPTSSQGSINMEHWISQAIHGSTTSTTSSSSTQSGGSGAAHRLADVMAQTHIENHSAPPDVTTYTSEHSVQVERPQGSTTSRTAPKYGNAELMETGDGVPVSSRVSAKIQQLVNTLKRPKRPPLREFFVDDFEELLEVQQPDPNQPKPEGAQMLAMRGEQLGVVTNWPPSLEAALQRWGTISPKAPCLTTMDTNGKPLYILTYGKLWTRSMKVAYNILHKLGTKQEPMVRPGDRVALVFPNNDPAASMVAFYGCLLAEVVPVPIEVPLTRKDAGSQQIGFLLGSCGVTVALTSDACHKGLPKSPTGEIPQFKGWPKLLWFVTESKHLSKPPRDWFPHIKDANNDTAYIEYKTCKDGSVLGVTVTRIALLTHCQALTQACGYTEAETIVNVLDFKKDVGLWHGILTSVMNMMHVISIPYSLMKVNPLSWIQKVCQYKAKVACVKSRDMHWALVAHRDQRDINLSSLRMLIVADGANPWSISSCDAFLNVFQSKGLRQEVICPCASSPEALTVAIRRPTDDSNQPPGRGVLSMHGLTYGVIRVDSEEKLSVLTVQDVGLVMPGAVMCSVKPDGVPQLCRTDEVGELCVCAVATGTSYYGLSGMTKNTFEVFPVTGSGAPVSEYPFVRTGLLGFVGPGGLVFVVGKMDGLMVVSGRRHNADDIVATALAVEPMKFVYRGRIAVFSVTVLHDERIVIVAEQRPDSTEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHLSETKQLFLEGSLHPCNVLMCPHTCVTNLPKPRQKQPEIGPASVMVGNLVSGKRIAQASGRDLGQIEDNDQARKFLFLSEVLQWRAQTTPDHVLYTLLNCRGTIANSLTCVQLHKRAEKIAVMLMERGHLQDGDHVALVYPPGIDLIAAFYGCLYAGCVPITVRPPHPQNIATTLPTVKMIVEVSRSACLMTTQLICKLLRSREAAAAVDVRAWPPILDTDDLPKKRPAQIYKPSNPDTLAYLDFSVSTTGMLAGVKMSHAATSAFCRSIKLQCELYPSREVAICLDPYCGLGFVLWCLCSVYSGHQSILIPPAELETNPALWLLAVSQYKVRDTFCSYSVMELCTKGLGSQTESLKARGLDLSRVRTCVVVAEERPRIALTQSFSKLFKDLGLHPRAVSTSFGCRVNLAICLQGTSGPDPTTVYVDMRALRHDRVRLVERGSPHSLPLMESGKILPGVRIIIANPETKGPLGDSHLGEIWVHSAHNASGYFTIYGDESLQSDHFSSRLSFGDTQTVWARTGYLGFLRRTELTDANGERHDALYVVGALDEAMELRGMRYHPIDIETSVIRAHKSVTECAVFTWTNLLVVVVELDGSEQEALDLVPLVTNVVLEEHYLVVGVVVVVDIGVIPINSRGEKQRMHLRDGFLADQLDPIYVAYNM", "length": 1556, "header": "tr|A0A287BDU4-1|A0A287BDU4_PIG Isoform 1 of Disco interacting C OS=Sus scrofa OX=9823 GN=DIP2C PE=1 SV=1 CANONICAL=A0A287BDU4-1" }, "isoforms": [ { "isoform_ac": "A0A286ZRB0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRB0/entry", "sequence": { "sequence": "MADRSLEGMALPLEVRARLAELELELSEGDITQKGYEKKRSKLIGAYLPQPPTANGAAVVRCRLQHSEGAPRRMLQAGNIGVCDIRDAAVRGRAASTAGNRPLFYFRFDVHTEAVQAALAKHKERKMAVPMPSKRRSLVVQTSMDAYTPPDTSSGSEDEGSVQGDSQGTPTSSQGSINMEHWISQAIHGSTTSTTSSSSTQSGGSGAAHRLADVMAQTHIENHSAPPDVTTYTSEHSVQVERPQGSTTSRTAPKYGNAELMETGDGVPVSSRVSAKIQQLVNTLKRPKRPPLREFFVDDFEELLEVQQPDPNQPKPEGAQMLAMRGEQLGVVTNWPPSLEAALQRWGTISPKAPCLTTMDTNGKPLYILTYGKLWTRSMKVAYNILHKLGTKQEPMVRPGDRVALVFPNNDPAASMVAFYGCLLAEVVPVPIEVPLTRKDAGSQQIGFLLGSCGVTVALTSDACHKGLPKSPTGEIPQFKGWPKLLWFVTESKHLSKPPRDWFPHIKDANNDTAYIEYKTCKDGSVLGVTVTRIALLTHCQALTQACGYTEAETIVNVLDFKKDVGLWHGILTSVMNMMHVISIPYSLMKVNPLSWIQKVCQYKAKVACVKSRDMHWALVAHRDQRDINLSSLRMLIVADGANPWSISSCDAFLNVFQSKGLRQEVICPCASSPEALTVAIRRPTDDSNQPPGRGVLSMHGLTYGVIRVDSEEKLSVLTVQDVGLVMPGAVMCSVKPDGVPQLCRTDEVGELCVCAVATGTSYYGLSGMTKNTFEVFPVTGSGAPVSEYPFVRTGLLGFVGPGGLVFVVGKMDGLMVVSGRRHNADDIVATALAVEPMKFVYRGRIAVFSVTVLHDERIVIVAEQRPDSTEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHLSETKQLFLEGSLHPCNVLMCPHTCVTNLPKPRQKQPEIGPASVMVGNLVSGKRIAQASGRDLGQIEDNDQARKFLFLSEVLQWRAQTTPDHVLYTLLNCRGTIANSLTCVQLHKRAEKIAVMLMERGHLQDGDHVALVYPPGIDLIAAFYGCLYAGCVPITVRPPHPQNIATTLPTVKMIVEVSRSACLMTTQLICKLLRSREAAAAVDVRAWPPILDTDDLPKKRPAQIYKPSNPDTLAYLDFSVSTTGMLAGVKMSHAATSAFCRSIKLQCELYPSREVAICLDPYCGLGFVLWCLCSVYSGHQSILIPPAELETNPALWLLAVSQYKVRDTFCSYSVMELCTKGLGSQTESLKARGLDLSRVRTCVVVAEERPRIALTQSFSKLFKDLGLHPRAVSTSFGCRVNLAICLQGTSGPDPTTVYVDMRALRHDRVRLVERGSPHSLPLMESGKILPGVRIIIANPETKGPLGDSHLGEIWVHSAHNASGYFTIYGDESLQSDHFSSRLSFGDTQTVWARTGYLGFLRRTELTDANGERHDALYVVGALDEAMELRGMRYHPIDIETSVIRAHKSVTECAVFTWTNLLVVVVELDGSEQEALDLVPLVTNVVLEEHYLVVGVVVVVDIGVIPINSRGEKQRMHLRDGFLADQLDPIYVAYNM", "length": 1575, "header": "tr|A0A286ZRB0-1|A0A287BDU4_PIG Computationally mapped isoform of Disco interacting C OS=Sus scrofa OX=9823 GN=DIP2C PE=1 SV=1 CANONICAL=A0A287BDU4-1" }, "locus": { "chromosome": "10", "start_pos": 69139478, "end_pos": 68770310, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042952.3", "url": "https://www.ensembl.org/id/ENSSSCT00000042952.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034119.1", "url": "https://www.ensembl.org/id/ENSSSCP00000034119.1" } ] } }, { "isoform_ac": "A0A287B2G8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B2G8/entry", "sequence": { "sequence": "MADRSLEGMALPLEVRARLAELELELSEGDITQKGYEKKRSKLIGAYLPQPPTANGAAVVRCRLQHSEGAPRRMLQAGNIGVCDIRDAAVRGRAASTAGNRPLFYFRVDQALPPERRAPVTPSSSSRYHRRRSSGSRDERYRSDVHTEAVQAALAKHKERKMAVPMPSKRRSLVVQTSMDAYTPPDTSSGSEDEGSVQGDSQGTPTSSQGSINMEHWISQAIHGSTTSTTSSSSTQSGGSGAAHRLADVMAQTHIENHSAPPDVTTYTSEHSVQVERPQGSTTSRTAPKYGNAELMETGDGVPVSSRVSAKIQQLVNTLKRPKRPPLREFFVDDFEELLEVQQPDPNQPKPEGAQMLAMRGEQLGVVTNWPPSLEAALQRWGTISPKAPCLTTMDTNGKPLYILTYGKLWTRSMKVAYNILHKLGTKQEPMVRPGDRVALVFPNNDPAASMVAFYGCLLAEVVPVPIEVPLTRKDAGSQQIGFLLGSCGVTVALTSDACHKGLPKSPTGEIPQFKGWPKLLWFVTESKHLSKPPRDWFPHIKDANNDTAYIEYKTCKDGSVLGVTVTRIALLTHCQALTQACGYTEAETIVNVLDFKKDVGLWHGILTSVMNMMHVISIPYSLMKVNPLSWIQKVCQYKAKVACVKSRDMHWALVAHRDQRDINLSSLRMLIVADGANPWSISSCDAFLNVFQSKGLRQEVICPCASSPEALTVAIRRPTDDSNQPPGRGVLSMHGLTYGVIRVDSEEKLSVLTVQDVGLVMPGAVMCSVKPDGVPQLCRTDEVGELCVCAVATGTSYYGLSGMTKNTFEVFPVTGSGAPVSEYPFVRTGLLGFVGPGGLVFVVGKMDGLMVVSGRRHNADDIVATALAVEPMKFVYRGRIAVFSVTVLHDERIVIVAEQRPDSTEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHLSETKQLFLEGSLHPCNVLMCPHTCVTNLPKPRQKQPEIGPASVMVGNLVSGKRIAQASGRDLGQIEDNDQARKFLFLSEVLQWRAQTTPDHVLYTLLNCRGTIANSLTCVQLHKRAEKIAVMLMERGHLQDGDHVALVYPPGIDLIAAFYGCLYAGCVPITVRPPHPQNIATTLPTVKMIVEVSRSACLMTTQLICKLLRSREAAAAVDVRAWPPILDTDDLPKKRPAQIYKPSNPDTLAYLDFSVSTTGMLAGVKMSHAATSAFCRSIKLQCELYPSREVAICLDPYCGLGFVLWCLCSVYSGHQSILIPPAELETNPALWLLAVSQYKVRDTFCSYSVMELCTKGLGSQTESLKARGLDLSRVRTCVVVAEERPRIALTQSFSKLFKDLGLHPRAVSTSFGCRVNLAICLQGTSGPDPTTVYVDMRALRHDRVRLVERGSPHSLPLMESGKILPGVRIIIANPETKGPLGDSHLGEIWVHSAHNASGYFTIYGDESLQSDHFSSRLSFGDTQTVWARTGYLGFLRRTELTDANGERHDALYVVGALDEAMELRGMRYHPIDIETSVIRAHKSVTECAVFTWTNLLVVVVELDGSEQEALDLVPLVTNVVLEEHYLVVGVVVVVDIGVIPINSRGEKQRMHLRDGFLADQLDPIYVAYNM", "length": 1610, "header": "tr|A0A287B2G8-1|A0A287BDU4_PIG Computationally mapped isoform of Disco interacting C OS=Sus scrofa OX=9823 GN=DIP2C PE=1 SV=2 CANONICAL=A0A287BDU4-1" }, "locus": { "chromosome": "10", "start_pos": 69139478, "end_pos": 68770310, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051140.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051140.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050298.2", "url": "https://www.ensembl.org/id/ENSSSCP00000050298.2" } ] } }, { "isoform_ac": "A0A287BDU4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BDU4/entry", "sequence": { "sequence": "MADRSLEGMALPLEVRARLAELELELSEGDITQKGYEKKRSKLIGAYLPQPPRVDQALPPERRAPVTPSSSSRYHRRRSSGSRDERYRSDVHTEAVQAALAKHKERKMAVPMPSKRRSLVVQTSMDAYTPPDTSSGSEDEGSVQGDSQGTPTSSQGSINMEHWISQAIHGSTTSTTSSSSTQSGGSGAAHRLADVMAQTHIENHSAPPDVTTYTSEHSVQVERPQGSTTSRTAPKYGNAELMETGDGVPVSSRVSAKIQQLVNTLKRPKRPPLREFFVDDFEELLEVQQPDPNQPKPEGAQMLAMRGEQLGVVTNWPPSLEAALQRWGTISPKAPCLTTMDTNGKPLYILTYGKLWTRSMKVAYNILHKLGTKQEPMVRPGDRVALVFPNNDPAASMVAFYGCLLAEVVPVPIEVPLTRKDAGSQQIGFLLGSCGVTVALTSDACHKGLPKSPTGEIPQFKGWPKLLWFVTESKHLSKPPRDWFPHIKDANNDTAYIEYKTCKDGSVLGVTVTRIALLTHCQALTQACGYTEAETIVNVLDFKKDVGLWHGILTSVMNMMHVISIPYSLMKVNPLSWIQKVCQYKAKVACVKSRDMHWALVAHRDQRDINLSSLRMLIVADGANPWSISSCDAFLNVFQSKGLRQEVICPCASSPEALTVAIRRPTDDSNQPPGRGVLSMHGLTYGVIRVDSEEKLSVLTVQDVGLVMPGAVMCSVKPDGVPQLCRTDEVGELCVCAVATGTSYYGLSGMTKNTFEVFPVTGSGAPVSEYPFVRTGLLGFVGPGGLVFVVGKMDGLMVVSGRRHNADDIVATALAVEPMKFVYRGRIAVFSVTVLHDERIVIVAEQRPDSTEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHLSETKQLFLEGSLHPCNVLMCPHTCVTNLPKPRQKQPEIGPASVMVGNLVSGKRIAQASGRDLGQIEDNDQARKFLFLSEVLQWRAQTTPDHVLYTLLNCRGTIANSLTCVQLHKRAEKIAVMLMERGHLQDGDHVALVYPPGIDLIAAFYGCLYAGCVPITVRPPHPQNIATTLPTVKMIVEVSRSACLMTTQLICKLLRSREAAAAVDVRAWPPILDTDDLPKKRPAQIYKPSNPDTLAYLDFSVSTTGMLAGVKMSHAATSAFCRSIKLQCELYPSREVAICLDPYCGLGFVLWCLCSVYSGHQSILIPPAELETNPALWLLAVSQYKVRDTFCSYSVMELCTKGLGSQTESLKARGLDLSRVRTCVVVAEERPRIALTQSFSKLFKDLGLHPRAVSTSFGCRVNLAICLQGTSGPDPTTVYVDMRALRHDRVRLVERGSPHSLPLMESGKILPGVRIIIANPETKGPLGDSHLGEIWVHSAHNASGYFTIYGDESLQSDHFSSRLSFGDTQTVWARTGYLGFLRRTELTDANGERHDALYVVGALDEAMELRGMRYHPIDIETSVIRAHKSVTECAVFTWTNLLVVVVELDGSEQEALDLVPLVTNVVLEEHYLVVGVVVVVDIGVIPINSRGEKQRMHLRDGFLADQLDPIYVAYNM", "length": 1556, "header": "tr|A0A287BDU4-1|A0A287BDU4_PIG Isoform 1 of Disco interacting C OS=Sus scrofa OX=9823 GN=DIP2C PE=1 SV=1 CANONICAL=A0A287BDU4-1" }, "locus": { "chromosome": "10", "start_pos": 69139478, "end_pos": 68770310, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051146.1", "url": "https://www.ensembl.org/id/ENSSSCT00000051146.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054697.1", "url": "https://www.ensembl.org/id/ENSSSCP00000054697.1" } ] } }, { "isoform_ac": "A0A287BKC3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BKC3/entry", "sequence": { "sequence": "MADRSLEGMALPLEVRARLAELELELSEGDITQKGYEKKRSKLIGAYLPQPPRVDQALPPERRAPVTPSSSSRYHRRRSSGSRDERYRSDVHTEAVQAALAKHKERKMAVPMPSKRRSLVVQTSMDAYTPPDTSSGSEDEGSVQGDSQGTPTSSQGSINMEHWISQAIHGSTTSTTSSSSTQSGGSGAAHRLADVMAQTHIENHSAPPDVTTYTSEHSVQVERPQGSTTSRTAPKYGNAELMETGDGVPVSSRVSAKIQQLVNTLKRPKRPPLREFFVDDFEELLEVQQPDPNQPKPEGAQMLAMRGEQLGVVTNWPPSLEAALQRWGTISPKAPCLTTMDTNGKPLYILTYGKLWTRSMKVAYNILHKLGTKQEPMVRPGDRVALVFPNNDPAASMVAFYGCLLAEVVPVPIEVPLTRKDAGSQQIGFLLGSCGVTVALTSDACHKGLPKSPTGEIPQFKGWPKLLWFVTESKHLSKPPRDWFPHIKDANNDTAYIEYKTCKDGSVLGVTVTRIALLTHCQALTQACGYTEAETIVNVLDFKKDVGLWHGILTSVMNMMHVISIPYSLMKVNPLSWIQKVCQYKAKVACVKSRDMHWALVAHRDQRDINLSSLRMLIVADGANPWSISSCDAFLNVFQSKGLRQEVICPCASSPEALTVAIRRPTDDSNQPPGRGVLSMHGLTYGVIRVDSEEKLSVLTVQDVGLVMPGAVMCSVKPDGVPQLCRTDEVGELCVCAVATGTSYYGLSGMTKNTFEVFPVTGSGAPVSEYPFVRTGLLGFVGPGGLVFVVGKMDGLMVVSGRRHNADDIVATALAVEPMKFVYRGRIAVFSVTVLHDERIVIVAEQRPDSTEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHLSETKQLFLEGSLHPCNVLMCPHTCVTNLPKPRQKQPEIGPASVMVGNLVSGKRIAQASGRDLGQIEDNDQARKFLFLSEVLQWRAQTTPDHVLYTLLNCRGTIANSLTCVQLHKRAEKIAVMLMERGHLQDGDHVALVYPPGIDLIAAFYGCLYAGCVPITVRPPHPQNIATTLPTVKMIVEVSRSACLMTTQLICKLLRSREAAAAVDVRAWPPILDTDDLPKKRPAQIYKPSNPDTLAYLDFSVSTTGMLAGVKMSHAATSAFCRSIKLQCELYPSREVAICLDPYCGLGFVLWCLCSVYSGHQSILIPPAELETNPALWLLAVSQYKVRDTFCSYSVMELCTKGLGSQTESLKARGLDLSRVRTCVVVAEERPRIALTQSFSKLFKDLGLHPRAVSTSFGCRVNLAICLQGTSGPDPTTVYVDMRALRHDRVRLVERGSPHSLPLMESGKILPGVRIIIANPETKGPLGDSHLGEKAECVWPRRLPSSQLLVISHVPAFWRRSLDRNRTERTGEWRETQSRSRSWSSSRRVGAQQWLVRKSPAPPPPCPTPPCPGQLWLLRPDPARRQGCQPPPSPVLAGFTPPICLPPFSAPRTISGPSWPQGPSCLAARCVVRLPLTQTYSNRTQNAAVAVACLERQPHRLLVWPLEGVKSGEDKSLNPLPSWAVLAPPPHCVKQSDRILYTRNLGLP", "length": 1588, "header": "tr|A0A287BKC3-1|A0A287BKC3_PIG Computationally mapped isoform of Disco interacting C OS=Sus scrofa OX=9823 GN=DIP2C PE=1 SV=3 CANONICAL=A0A287BDU4-1" }, "locus": { "chromosome": "10", "start_pos": 69135045, "end_pos": 68770310, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051221.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051221.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056851.3", "url": "https://www.ensembl.org/id/ENSSSCP00000056851.3" } ] } }, { "isoform_ac": "A0A5G2QJ75-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ75/entry", "sequence": { "sequence": "MLAPPCPGSMLAGVLLPAGSRRSELSFPSLTGDITQKGYEKKRSKLIGAYLPQPPTANGAAVVRCRLQHSEGAPRRMLQAGNIGVCDIRDAAVRGRAASTAGNRPLFYFRFGVDQALPPERRAPVTPSSSSRYHRRRSSGSRDERYRSDVHTEAVQAALAKHKERKMAVPMPSKRRSLVVQTSMDAYTPPDTSSGSEDEGSVQGDSQGTPTSSQGSINMEHWISQAIHGSTTSTTSSSSTQSGGSGAAHRLADVMAQTHIENHSAPPDVTTYTSEHSVQVERPQGSTTSRTAPKYGNAELMETGDGVPVSSRVSAKIQQLVNTLKRPKRPPLREFFVDDFEELLEVQQPDPNQPKPEGAQMLAMRGEQLGVVTNWPPSLEAALQRWGTISPKAPCLTTMDTNGKPLYILTYGKLWTRSMKVAYNILHKLGTKQEPMVRPGDRVALVFPNNDPAASMVAFYGCLLAEVVPVPIEVPLTRKDAGSQQIGFLLGSCGVTVALTSDACHKGLPKSPTGEIPQFKGWPKLLWFVTESKHLSKPPRDWFPHIKDANNDTAYIEYKTCKDGSVLGVTVTRIALLTHCQALTQACGYTEAETIVNVLDFKKDVGLWHGILTSVMNMMHVISIPYSLMKVNPLSWIQKVCQYKAKVACVKSRDMHWALVAHRDQRDINLSSLRMLIVADGANPWSISSCDAFLNVFQSKGLRQEVICPCASSPEALTVAIRRPTDDSNQPPGRGVLSMHGLTYGVIRVDSEEKLSVLTVQDVGLVMPGAVMCSVKPDGVPQLCRTDEVGELCVCAVATGTSYYGLSGMTKNTFEVFPVTGSGAPVSEYPFVRTGLLGFVGPGGLVFVVGKMDGLMVVSGRRHNADDIVATALAVEPMKFVYRGRIAVFSVTVLHDERIVIVAEQRPDSTEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHLSETKQLFLEGSLHPCNVLMCPHTCVTNLPKPRQKQPEIGPASVMVGNLVSGKRIAQASGRDLGQIEDNDQARKFLFLSEVLQWRAQTTPDHVLYTLLNCRGTIANSLTCVQLHKRAEKIAVMLMERGHLQDGDHVALVYPPGIDLIAAFYGCLYAGCVPITVRPPHPQNIATTLPTVKMIVEVSRSACLMTTQLICKLLRSREAAAAVDVRAWPPILDTDDLPKKRPAQIYKPSNPDTLAYLDFSVSTTGMLAGVKMSHAATSAFCRSIKLQCELYPSREVAICLDPYCGLGFVLWCLCSVYSGHQSILIPPAELETNPALWLLAVSQYKVRDTFCSYSVMELCTKGLGSQTESLKARGLDLSRVRTCVVVAEERPRIALTQSFSKLFKDLGLHPRAVSTSFGCRVNLAICLQGTSGPDPTTVYVDMRALRHDRVRLVERGSPHSLPLMESGKILPGVRIIIANPETKGPLGDSHLGEIWVHSAHNASGYFTIYGDESLQSDHFSSRLSFGDTQTVWARTGYLGFLRRTELTDANGERHDALYVVGALDEAMELRGMRYHPIDIETSVIRAHKSVTECAVFTWTNLLVVVVELDGSEQEALDLVPLVTNVVLEEHYLVVGVVVVVDIGVIPINSRGEKQRMHLRDGFLADQLDPIYVAYNM", "length": 1615, "header": "tr|A0A5G2QJ75-1|A0A287BDU4_PIG Computationally mapped isoform of Disco interacting C OS=Sus scrofa OX=9823 GN=DIP2C PE=1 SV=2 CANONICAL=A0A287BDU4-1" }, "locus": { "chromosome": "10", "start_pos": 69139478, "end_pos": 68958985, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079576.2", "url": "https://www.ensembl.org/id/ENSSSCT00000079576.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064512.2", "url": "https://www.ensembl.org/id/ENSSSCP00000064512.2" } ] } }, { "isoform_ac": "A0A8W4F9V3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9V3/entry", "sequence": { "sequence": "MLQAGNIGVCDIRDAAVRGRAASTAGNRPLFYFRFGVDQALPPERRAPVTPSSSSRYHRRRSSGSRDERYRSDVHTEAVQAALAKHKERKMAVPMPSKRRSLVVQTSMDAYTPPDTSSGSEDEGSVQGDSQGTPTSSQGSINMEHWISQAIHGSTTSTTSSSSTQSGGSGAAHRLADVMAQTHIENHSAPPDVTTYTSEHSVQVERPQGSTTSRTAPKYGNAELMETGDGVPVSSRVSAKIQQLVNTLKRPKRPPLREFFVDDFEELLEVQQPDPNQPKPEGAQMLAMRGEQLGVVTNWPPSLEAALQRWGTISPKAPCLTTMDTNGKPLYILTYGKLWTRSMKVAYNILHKLGTKQEPMVRPGDRVALVFPNNDPAASMVAFYGCLLAEVVPVPIEVPLTRKDAGSQQIGFLLGSCGVTVALTSDACHKGLPKSPTGEIPQFKGWPKLLWFVTESKHLSKPPRDWFPHIKDANNDTAYIEYKTCKDGSVLGVTVTRIALLTHCQALTQACGYTEAETIVNVLDFKKDVGLWHGILTSVMNMMHVISIPYSLMKVNPLSWIQKVCQYKAKVACVKSRDMHWALVAHRDQRDINLSSLRMLIVADGANPWSISSCDAFLNVFQSKGLRQEVICPCASSPEALTVAIRRPTDDSNQPPGRGVLSMHGLTYGVIRVDSEEKLSVLTVQDVGLVMPGAVMCSVKPDGVPQLCRTDEVGELCVCAVATGTSYYGLSGMTKNTFEVFPVTGSGAPVSEYPFVRTGLLGFVGPGGLVFVVGKMDGLMVVSGRRHNADDIVATALAVEPMKFVYRGRIAVFSVTVLHDERIVIVAEQRPDSTEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHLSETKQLFLEGSLHPCNVLMCPHTCVTNLPKPRQKQPEIGPASVMVGNLVSGKRIAQASGRDLGQIEDNDQARKFLFLSEVLQWRAQTTPDHVLYTLLNCRGTIANSLTCVQLHKRAEKIAVMLMERGHLQDGDHVALVYPPGIDLIAAFYGCLYAGCVPITVRPPHPQNIATTLPTVKMIVEVSRSACLMTTQLICKLLRSREAAAAVDVRAWPPILDTDDLPKKRPAQIYKPSNPDTLAYLDFSVSTTGMLAGVKMSHAATSAFCRSIKLQCELYPSREVAICLDPYCGLGFVLWCLCSVYSGHQSILIPPAELETNPALWLLAVSQYKVRDTFCSYSVMELCTKGLGSQTESLKARGLDLSRVRTCVVVAEERPRIALTQSFSKLFKDLGLHPRAVSTSFGCRVNLAICLQGTSGPDPTTVYVDMRALRHDRVRLVERGSPHSLPLMESGKILPGVRIIIANPETKGPLGDSHLGEIWVHSAHNASGYFTIYGDESLQSDHFSSRLSFGDTQTVWARTGYLGFLRRTELTDANGERHDALYVVGALDEAMELRGMRYHPIDIETSVIRAHKSVTECAVFTWTNLLVVVVELDGSEQEALDLVPLVTNVVLEEHYLVVGVVVVVDIGVIPINSRGEKQRMHLRDGFLADQLDPIYVAYNM", "length": 1539, "header": "tr|A0A8W4F9V3-1|A0A287BDU4_PIG Computationally mapped isoform of Disco interacting C OS=Sus scrofa OX=9823 GN=DIP2C PE=1 SV=1 CANONICAL=A0A287BDU4-1" }, "locus": { "chromosome": "10", "start_pos": 69139478, "end_pos": 68961077, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000098676.1", "url": "https://www.ensembl.org/id/ENSSSCT00000098676.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076055.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076055.1" } ] } }, { "isoform_ac": "A0A8W4FJS4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJS4/entry", "sequence": { "sequence": "MADRSLEGMALPLEVRARLAELELELSEGDITQKGYEKKRSKLIGAYLPQPPTANGAAVVRCRLQHSEGAPRRMLQAGNIGVCDIRDAAVRGRAASTAGNRPLFYFRFGVDQALPPERRAPVTPSSSSRYHRRRSSGSRDERYRSDVHTEAVQAALAKHKERKMAVPMPSKRRSLVVQTSMDAYTPPDTSSGSEDEGSVQGDSQGTPTSSQGSINMEHWISQAIHGSTTSTTSSSSTQSGGSGAAHRLADVMAQTHIGVPVSSRVSAKIQQLVNTLKRPKRPPLREFFVDDFEELLEVQQPDPNQPKPEGAQMLAMRGEQLGVVTNWPPSLEAALQRWGTISPKAPCLTTMDTNGKPLYILTYGKLWTRSMKVAYNILHKLGTKQEPMVRPGDRVALVFPNNDPAASMVAFYGCLLAEVVPVPIEVPLTRKDAGSQQIGFLLGSCGVTVALTSDACHKGLPKSPTGEIPQFKGWPKLLWFVTESKHLSKPPRDWFPHIKDANNDTAYIEYKTCKDGSVLGVTVTRIALLTHCQALTQACGYTEAETIVNVLDFKKDVGLWHGILTSVMNMMHVISIPYSLMKVNPLSWIQKVCQYKAKVACVKSRDMHWALVAHRDQRDINLSSLRMLIVADGANPWSISSCDAFLNVFQSKGLRQEVICPCASSPEALTVAIRRPTDDSNQPPGRGVLSMHGLTYGVIRVDSEEKLSVLTVQDVGLVMPGAVMCSVKPDGVPQLCRTDEVGELCVCAVATGTSYYGLSGMTKNTFEVFPVTGSGAPVSEYPFVRTGLLGFVGPGGLVFVVGKMDGLMVVSGRRHNADDIVATALAVEPMKFVYRGRIAVFSVTVLHDERIVIVAEQRPDSTEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHLSETKQLFLEGSLHPCNVLMCPHTCVTNLPKPRQKQPEIGPASVMVGNLVSGKRIAQASGRDLGQIEDNDQARKFLFLSEVLQWRAQTTPDHVLYTLLNCRGTIANSLTCVQLHKRAEKIAVMLMERGHLQDGDHVALVYPPGIDLIAAFYGCLYAGCVPITVRPPHPQNIATTLPTVKMIVEVSRSACLMTTQLICKLLRSREAAAAVDVRAWPPILDTDDLPKKRPAQIYKPSNPDTLAYLDFSVSTTGMLAGVKMSHAATSAFCRSIKLQCELYPSREVAICLDPYCGLGFVLWCLCSVYSGHQSILIPPAELETNPALWLLAVSQYKVRDTFCSYSVMELCTKGLGSQTESLKARGLDLSRVRTCVVVAEERPRIALTQSFSKLFKDLGLHPRAVSTSFGCRVNLAICLQGTSGPDPTTVYVDMRALRHDRVRLVERGSPHSLPLMESGKILPGVRIIIANPETKGPLGDSHLGEIWVHSAHNASGYFTIYGDESLQSDHFSSRLSFGDTQTVWARTGYLGFLRRTELTDANGERHDALYVVGALDEAMELRGMRYHPIDIETSVIRAHKSVTECAVFTWTNLLVVVVELDGSEQEALDLVPLVTNVVLEEHYLVVGVVVVVDIGVIPINSRGEKQRMHLRDGFLADQLDPIYVAYNM", "length": 1567, "header": "tr|A0A8W4FJS4-1|A0A287BDU4_PIG Computationally mapped isoform of Disco interacting C OS=Sus scrofa OX=9823 GN=DIP2C PE=1 SV=1 CANONICAL=A0A287BDU4-1" }, "locus": { "chromosome": "10", "start_pos": 69139478, "end_pos": 68770310, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102701.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102701.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079148.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079148.1" } ] } }, { "isoform_ac": "A0A8W4FM60-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FM60/entry", "sequence": { "sequence": "MADRSLEGMALPLEVRARLAELELELSEGDITQKGYEKKRSKLIGAYLPQPPTANGAAVVRCRLQHSEGAPRRMLQAGNIGVCDIRDAAVRGRAASTAGNRPLFYFRFGVDQALPPERRAPVTPSSSSRYHRRRSSGSRDERYRSDVHTEAVQAALAKHKERKMAVPMPSKRRSLVVQTSMDAYTPPDTSSGSEDEGSVQGDSQGTPTSSQGSINMEHWISQAIHGSTTSTTSSSSTQSGGSGAAHRLADVMAQTHIENHSAPPDVTTYTSEHSVQVERPQGSTTSRTAPKYGNAELMETGDGVPVSSRVSAKIQQLVNTLKRPKRPPLREFFVDDFEELLEGKLWTRSMKVAYNILHKLGTKQEPMVRPGDRVALVFPNNDPAASMVAFYGCLLAEVVPVPIEVPLTRKDAGSQQIGFLLGSCGVTVALTSDACHKGLPKSPTGEIPQFKGWPKLLWFVTESKHLSKPPRDWFPHIKDANNDTAYIEYKTCKDGSVLGVTVTRIALLTHCQALTQACGYTEAETIVNVLDFKKDVGLWHGILTSVMNMMHVISIPYSLMKVNPLSWIQKVCQYKAKVACVKSRDMHWALVAHRDQRDINLSSLRMLIVADGANPWSISSCDAFLNVFQSKGLRQEVICPCASSPEALTVAIRRPTDDSNQPPGRGVLSMHGLTYGVIRVDSEEKLSVLTVQDVGLVMPGAVMCSVKPDGVPQLCRTDEVGELCVCAVATGTSYYGLSGMTKNTFEVFPVTGSGAPVSEYPFVRTGLLGFVGPGGLVFVVGKMDGLMVVSGRRHNADDIVATALAVEPMKFVYRGRIAVFSVTVLHDERIVIVAEQRPDSTEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHLSETKQLFLEGSLHPCNVLMCPHTCVTNLPKPRQKQPEIGPASVMVGNLVSGKRIAQASGRDLGQIEDNDQARKFLFLSEVLQWRAQTTPDHVLYTLLNCRGTIANSLTCVQLHKRAEKIAVMLMERGHLQDGDHVALVYPPGIDLIAAFYGCLYAGCVPITVRPPHPQNIATTLPTVKMIVEVSRSACLMTTQLICKLLRSREAAAAVDVRAWPPILDTDDLPKKRPAQIYKPSNPDTLAYLDFSVSTTGMLAGVKMSHAATSAFCRSIKLQCELYPSREVAICLDPYCGLGFVLWCLCSVYSGHQSILIPPAELETNPALWLLAVSQYKVRDTFCSYSVMELCTKGLGSQTESLKARGLDLSRVRTCVVVAEERPRIALTQSFSKLFKDLGLHPRAVSTSFGCRVNLAICLQGTSGPDPTTVYVDMRALRHDRVRLVERGSPHSLPLMESGKILPGVRIIIANPETKGPLGDSHLGEIWVHSAHNASGYFTIYGDESLQSDHFSSRLSFGDTQTVWARTGYLGFLRRTELTDANGERHDALYVVGALDEAMELRGMRYHPIDIETSVIRAHKSVTECAVFTWTNLLVVVVELDGSEQEALDLVPLVTNVVLEEHYLVVGVVVVVDIGVIPINSRGEKQRMHLRDGFLADQLDPIYVAYNM", "length": 1546, "header": "tr|A0A8W4FM60-1|A0A287BDU4_PIG Computationally mapped isoform of Disco interacting C OS=Sus scrofa OX=9823 GN=DIP2C PE=1 SV=1 CANONICAL=A0A287BDU4-1" }, "locus": { "chromosome": "10", "start_pos": 69139478, "end_pos": 68770310, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000100512.1", "url": "https://www.ensembl.org/id/ENSSSCT00000100512.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080579.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080579.1" } ] } }, { "isoform_ac": "F1RX45-1", "url": "https://www.uniprot.org/uniprotkb/F1RX45/entry", "sequence": { "sequence": "MADRSLEGMALPLEVRARLAELELELSEGDITQKGYEKKRSKLIGAYLPQPPTANGAAVVRCRLQHSEGAPRRMLQAGNIGVCDIRDAAVRGRAASTAGNRPLFYFRFGVDQALPPERRAPVTPSSSSRYHRRRSSGSRDERYRSDVHTEAVQAALAKHKERKMAVPMPSKRRSLVVQTSMDAYTPPDTSSGSEDEGSVQGDSQGTPTSSQGSINMEHWISQAIHGSTTSTTSSSSTQSGGSGAAHRLADVMAQTHIENHSAPPDVTTYTSEHSVQVERPQGSTTSRTAPKYGNAELMETGDGVPVSSRVSAKIQQLVNTLKRPKRPPLREFFVDDFEELLEVQQPDPNQPKPEGAQMLAMRGEQLGVVTNWPPSLEAALQRWGTISPKAPCLTTMDTNGKPLYILTYGKLWTRSMKVAYNILHKLGTKQEPMVRPGDRVALVFPNNDPAASMVAFYGCLLAEVVPVPIEVPLTRKDAGSQQIGFLLGSCGVTVALTSDACHKGLPKSPTGEIPQFKGWPKLLWFVTESKHLSKPPRDWFPHIKDANNDTAYIEYKTCKDGSVLGVTVTRIALLTHCQALTQACGYTEAETIVNVLDFKKDVGLWHGILTSVMNMMHVISIPYSLMKVNPLSWIQKVCQYKAKVACVKSRDMHWALVAHRDQRDINLSSLRMLIVADGANPWSISSCDAFLNVFQSKGLRQEVICPCASSPEALTVAIRRPTDDSNQPPGRGVLSMHGLTYGVIRVDSEEKLSVLTVQDVGLVMPGAVMCSVKPDGVPQLCRTDEVGELCVCAVATGTSYYGLSGMTKNTFEVFPVTGSGAPVSEYPFVRTGLLGFVGPGGLVFVVGKMDGLMVVSGRRHNADDIVATALAVEPMKFVYRGRIAVFSVTVLHDERIVIVAEQRPDSTEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHLSETKQLFLEGSLHPCNVLMCPHTCVTNLPKPRQKQPEIGPASVMVGNLVSGKRIAQASGRDLGQIEDNDQARKFLFLSEVLQWRAQTTPDHVLYTLLNCRGTIANSLTCVQLHKRAEKIAVMLMERGHLQDGDHVALVYPPGIDLIAAFYGCLYAGCVPITVRPPHPQNIATTLPTVKMIVEVSRSACLMTTQLICKLLRSREAAAAVDVRAWPPILDTDDLPKKRPAQIYKPSNPDTLAYLDFSVSTTGMLAGVKMSHAATSAFCRSIKLQCELYPSREVAICLDPYCGLGFVLWCLCSVYSGHQSILIPPAELETNPALWLLAVSQYKVRDTFCSYSVMELCTKGLGSQTESLKARGLDLSRVRTCVVVAEERPRIALTQSFSKLFKDLGLHPRAVSTSFGCRVNLAICLQPHRLWTLAQQGTSGPDPTTVYVDMRALRHDRVRLVERGSPHSLPLMESGKILPGVRIIIANPETKGPLGDSHLGEIWVHSAHNASGYFTIYGDESLQSDHFSSRLSFGDTQTVWARTGYLGFLRRTELTDANGERHDALYVVGALDEAMELRGMRYHPIDIETSVIRAHKSVTECAVFTWTNLLVVVVELDGSEQEALDLVPLVTNVVLEEHYLVVGVVVVVDIGVIPINSRGEKQRMHLRDGFLADQLDPIYVAYNM", "length": 1622, "header": "tr|F1RX45-1|A0A287BDU4_PIG Computationally mapped isoform of Disco interacting C OS=Sus scrofa OX=9823 GN=DIP2C PE=1 SV=4 CANONICAL=A0A287BDU4-1" }, "locus": { "chromosome": "10", "start_pos": 69139478, "end_pos": 68770310, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012225.5", "url": "https://www.ensembl.org/id/ENSSSCT00000012225.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011911.4", "url": "https://www.ensembl.org/id/ENSSSCP00000011911.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 67, "start_aa": "Thr", "end_pos": 67, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr67", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJ75", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ75" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0AAA9SDR2-1", "protein_name": "Disco interacting C", "gene_name": "DIP2C", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MADRSLEGMALPLEVRARLAELELELSEGDITQKGYEKKRSKLIGAYLPQPPTANGAAVVRCRLQHSEGAPRRMLQAGNIGVCDIRDAAVRERAASTAGNRPLFYFRFGVDQALPPERRAPVTPSSASRYHRRRSSGSRDERYRSDVHTEAVQAALAKHKERKMAVPMPSKRRSLVVQTSMDAYTPPDTSSGSEDEGSVQGDSQGTPTSSQGSINMEHWISQAIHGSTTSTTSSSSTQSGGSGAAHRLADVLAQTHIVCFFTENHSAPPDVTTYTSEHAIQVERPQGSTTSRTAPKYGNAELMETGDGVPVSSRVSAKIQQLVNTLKRPKRPPLREFFVDDFEELLEVQQPDPNQPKPEGAQMLAMRGEQLGVVTNWPPSLEAALQRWGTISPKAPCLTTMDTNGKPLYILTYGKLWTRSMKVAYNILHKLGTKQEPMVRPGDRVALVFPNNDPAASMVAFYGCLLAEVVPVPIEVPLTRKDAGSQQIGFLLGSCGVTVALTSDACHKGLPKSPTGEIPQFKGWPKLLWFVTESKHLSKPPRDWFPHIKDANNDTAYIEYKTCKDGSVLGVTVTRIALLTHCQALTQACGYTEAETIVNVLDFKKDVGLWHGILTSVMNMMHVISIPYALMKVNPLSWIQKVCQYKAKVACVKSRDMHWALVAHRDQRDINLSSLRMLIVADGANPWSISSCDAFLNVFQSKGLRQEVICPCASSPEALTVAIRRPTDDSNQPPGRGVLSMHGLTYGVIRVDSEEKLSVLTVQDVGLVMPGAIMCSVKPDGVPQLCRTDEVGELCVCAVATGMSYYGLSGMTKNTFEVFPVTSSGAPVSEYPFVRTGLLGFVGPGGLVFVVGKMDGLMVVSGRRHNADDIVATALAVEPMKFVYRGRIAVFSVTVLHDERIVIVAEQRPDSTEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHLSETKQLFLEGSLHPCNVLMCPHTCVTNLPKPRQKQPEIGPASVMVGNLVSGKRIAQASGRDLGQIEDNDQARKFLFLSEVLQWRAQTTPDHVLYTLLNCRGTIANSLTCVQLHKRAEKIAVMLMERGHLQDGDHVALVYPPGIDLIAAFYGCLYAGCVPITVRPPHPQNIATTLPTVKMIVEVSRSACLMTTQLICKLLRSREAAAAVDVRAWPPILDTDDLPKKRPAQIYKPSNPDTLAYLDFSVSTTGMLAGVKMSHAATSAFCRSIKLQCELYPSREVAICLDPYCGLGFVLWCLCSVYSGHQSILIPPAELETNPALWLLAVSQYKVRDTFCSYSVMELCTKGLGSQTESLKARGLDLSRVRTCVVVAEERPRIALTQSFSKLFKDLGLHPRAVSTSFGCRVNLAICLQGTSGPDPTTVYVDMRALRHDRVRLVERGSPHSLPLMESGKILPGVRIIIANPETKGPLGDSHLGEIWVHSAHNASGYFTIYGDESLQSDHFNSRLSFGDTQTVWARTGYLGFLRRTELTDANGERHDALYVVGALDEAMELRGMRYHPIDIETSVIRAHKSVTECAVFTWTNLLVVVVELDGSEQEALDLVPLVTNVVLEEHYLVVGVVVVVDIGVIPINSRGEKQRMHLRDGFLADQLDPIYVAYNM", "length": 1617 }, "evidence": [ { "id": "A0A287BDU4", "url": "https://omabrowser.org/oma/group/A0A287BDU4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "D3ZZB0-1", "protein_name": "Disco-interacting protein 2 homolog C", "gene_name": "Dip2c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADRSLEGMALPLEVRARLAELELELSEGDITQKGYEKKRSKLIGAYLPQPPTANGAAVVRCRLQPGEGVPRRPFRSAHIGVCDIREAAARERAASAAGNRPLFYFRFGVDQALPQERRAPVTPSSASRYHRRRSSGSRDERYRSDVHTEAVQAALAKHKERKMAVPMPSKRRSLVVQTSMDAYTPPDTSSGSEDEGSVQGDSQGTPTSSQGSINMEHWISQAIHGSTTSTTSSSSTQSGGSGAAHRLADVMAQTHIENHSAPPDVTTYTSEHSIQVERPQGSTTSRTAPKYGNAELMETGDGVPVSSRVSAKIQQLVNTLKRPKRPPLREFFVDDFEELLEVQQPDPNQPKPEGAQMLATRGEQLGVVTNWPPSLEAALQRWGTISPKAPCLTTMDTNGKPLYILTYGKLWTRSMKVAYNILHKLGTKQEPMVRPGDRVALVFPNNDPAAFMVAFYGCLLAEVVPVPIEVPLTRKDAGSQQIGFLLGSCGVTVALTSDACHKGLPKSPTGEIPQFKGWPKLLWFVTESKHLSKPPRDWFPHIKDANNDTAYIEYKTCKDGSVLGVTVTRIALLTHCQALTQACGYTEAETIVNVLDFKKDVGLWHGILTSVMNMMHVISIPYALMKVNPLSWIQKVCQYKAKVACVKSRDMHWALVAHRDQRDVNLSSLRMLIVADGANPWSISSCDAFLNVFQSKGLRQEVICPCASSPEALTVAIRRPTDDSNQPPGRGVLSMHGLTYGVIRVDSEEKLSVLTVQDVGLVMPGAIMCSVKPDGVPQLCRTDEIGELCVCAVATGTSYYGLSGMTKNTFEVFPMTSSGAPISEYPFIRTGLLGFVGPGGLVFVVGKMDGLMVVSGRRHNADDIVATALAVEPMKFVYRGRIAVFSVTVLHDERIVIVAEQRPDSTEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHLSETKQLFLEGSLHPCNVLMCPHTCVTNLPKPRQKQPEIGPASVMVGNLVSGKRIAQASGRDLGQIEDNDQARKVRTEFLFLSEVLQWRAQTTPDHLLYTLLNCRGTIANSLTCVQLHKRAEKIAVMLMERGHLQDGDHVALVYPPGIDLIAAFYGCLYAGCVPITVRPPHPQNIATTLPTVKMIVEVSRSACLMTTQLICKLLRSREAAAAVDVRTWPLILDTDDLPKKRPAQIYKPSNPDTLAYLDFSVSTTGMLAGVKMSHAATSAFCRSIKLQCELYPSREVAICLDPYCGLGFVLWCLCSVYSGHQSILIPPSELETNPALWLLAVSQYKVRDTFCSYSVMELCTKGLGSQTESLKARGLDLSRVRTCVVVAEERPRIALTQSFSKLFKDLGLHPRAVSTSFGCRVNLAICLQGTSGPDPTTVYVDMRALRHDRVRLVERGSPHSLPLMESGKILPGVRIIIANPETKGPLGDSHLGEIWVHSAHNASGYFTIYGDESLQSDHFNSRLSFGDTQTIWARTGYLGFLRRTELTDANGERHDALYVVGALDEAMELRGMRYHPIDIETSVIRAHKSVTECAVFTWTNLLVVVVELDGSEQEALDLVPLVTNVVLEEHYLIVGVVVVVDIGVIPINSRGEKQRMHLRDGFLADQLDPIYVAYNM", "length": 1616 }, "evidence": [ { "id": "A0A287BDU4", "url": "https://omabrowser.org/oma/group/A0A287BDU4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q12275-1", "protein_name": "Homeostatic regulator of DAG", "gene_name": "CRM2", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MDFSIPPTLPLDLQSRLNELIQDYKDENLTRKGYETKRKQLLDKFEISQMRPYTPLRSPNSRKSKHLHRRNTSLASSITSLPNSIDRRHSIYRVTTINSTSANNTPRRRSKRYTASLQSSLPGSSDENGSVKDAVYNPMIPLLPRHTGAENTSSGDSAMTDSLPLILRGRFEHYDGQTAMISINSKGKETFITWDKLYLKAERVAHELNKSHLYKMDKILLWYNKNDVIEFTIALLGCFISGMAAVPVSFETYSLREILEIIKVTNSKFVLISNACHRQLDNLYSSSNHSKVKLVKNDVFQQIKFVKTDDLGTYTKAKKTSPTFDIPNISYIEFTRTPLGRLSGVVMKHNILINQFETMTKILNSRSMPHWKQKSQSIRKPFHKKIMATNSRFVILNSLDPTRSTGLIMGVLFNLFTGNLMISIDSSILQRPGGYENIIDKFRADILLNDQLQLKQVVINYLENPESAFSKKHKIDFSCIKSCLTSCTTIDTDVSEMVVHKWLKNLGCIDAPFCYSPMLTLLDFGGIFISIRDQLGNLENFPIHNSKLRLQNELFINREKLKLNEVECSITAMINSSSSFKDYLKLETFGFPIPDITLCVVNPDTNTLVQDLTVGEIWISSNHITDEFYQMDKVNEFVFKAKLNYSEMFSWAKYEMPTNEKSQAVTEQLDTILNICPANTYFMRTKLMGFVHNGKIYVLSLIEDMFLQNRLIRLPNWAHTSNLLYAKKGNQSAQPKGNTGAESTKAIDISSLSGETSSGYKRVVESHYLQQITETVVRTVNTVFEVAAFELQHHKEEHFLVMVVESSLAKTEEESKNGETTDTTLMKFAETQRNKLETKMNDLTDQIFRILWIFHKIQPMCILVVPRDTLPRRYCSLELANSTVEKKFLNNDLSAQFVKFQFDNVILDFLPHSAYYNESILSEHLSKLRKMALQEEYAMIEPAYRNGGPVKPKLALQCSGVDYRDESVDTRSHTKLTDFKSILEILEWRISNYGNETAFSDGTNTNLVNSSASNDNNVHKKVSWASFGKIVAGFLKKIVGSKIPLKHGDPIIIMCENSVEYVAMIMACLYCNLLVIPLPSVKESVIEEDLKGLVNIIQSYKVKRVFVDAKLHSLLNDNNVVNKCFKKYKSLIPKITVFSKVKTKNALTVSMFKNVLKQKFGAKPGTRIGMTPCVVWVNTEYDVTSNIHVTMTHSSLLNASKIVKETLQLRNNSPLFSICSHTSGLGFMFSCLLGIYTGASTCLFSLTDVLTDPKEFLIGLQNLNVKDLYLKLETLYALLDRASSLIEGFKNKKENINSAKNNTSGSLREDVFKGVRNIMIPFPNRPRIYTIENILKRYSTISLSCTQISYVYQHHFNPLISLRSYLDIPPVDLYLDPFSLREGIIREVNPNDVSAGNYIKIQDSGVVPVCTDVSVVNPETLLPCVDGEFGEIWCCSEANAFDYFVCNSSKNKLYKDPFITEQFKSKMKSEVNNTLSYLRTGDLGFIKNVSCTNSQGEVVNLNLLFVLGSIHESIEILGLTHFVSDLERTVKDVHSDIGSCLIAKAGGLLVCLIRCKERHNPILGNLTTLIVSELLNKHGVILDLCTFVRTKGISPKNSSMIMEVWAKNRASIMQAWFDQKIQIEAQFGINYGENISIYLLSDYEKDNI", "length": 1648 }, "evidence": [ { "id": "A0A287BDU4", "url": "https://omabrowser.org/oma/group/A0A287BDU4/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q9Y2E4-1", "protein_name": "Disco-interacting protein 2 homolog C", "gene_name": "DIP2C", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MADRSLEGMALPLEVRARLAELELELSEGDITQKGYEKKRSKLIGAYLPQPPRVDQALPQERRAPVTPSSASRYHRRRSSGSRDERYRSDVHTEAVQAALAKHKERKMAVPMPSKRRSLVVQTSMDAYTPPDTSSGSEDEGSVQGDSQGTPTSSQGSINMEHWISQAIHGSTTSTTSSSSTQSGGSGAAHRLADVMAQTHIENHSAPPDVTTYTSEHSIQVERPQGSTGSRTAPKYGNAELMETGDGVPVSSRVSAKIQQLVNTLKRPKRPPLREFFVDDFEELLEVQQPDPNQPKPEGAQMLAMRGEQLGVVTNWPPSLEAALQRWGTISPKAPCLTTMDTNGKPLYILTYGKLWTRSMKVAYSILHKLGTKQEPMVRPGDRVALVFPNNDPAAFMAAFYGCLLAEVVPVPIEVPLTRKDAGSQQIGFLLGSCGVTVALTSDACHKGLPKSPTGEIPQFKGWPKLLWFVTESKHLSKPPRDWFPHIKDANNDTAYIEYKTCKDGSVLGVTVTRTALLTHCQALTQACGYTEAETIVNVLDFKKDVGLWHGILTSVMNMMHVISIPYSLMKVNPLSWIQKVCQYKAKVACVKSRDMHWALVAHRDQRDINLSSLRMLIVADGANPWSISSCDAFLNVFQSKGLRQEVICPCASSPEALTVAIRRPTDDSNQPPGRGVLSMHGLTYGVIRVDSEEKLSVLTVQDVGLVMPGAIMCSVKPDGVPQLCRTDEIGELCVCAVATGTSYYGLSGMTKNTFEVFPMTSSGAPISEYPFIRTGLLGFVGPGGLVFVVGKMDGLMVVSGRRHNADDIVATALAVEPMKFVYRGRIAVFSVTVLHDERIVIVAEQRPDSTEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHLSETKQLFLEGSLHPCNVLMCPHTCVTNLPKPRQKQPEIGPASVMVGNLVSGKRIAQASGRDLGQIEDNDQARKFLFLSEVLQWRAQTTPDHILYTLLNCRGAIANSLTCVQLHKRAEKIAVMLMERGHLQDGDHVALVYPPGIDLIAAFYGCLYAGCVPITVRPPHPQNIATTLPTVKMIVEVSRSACLMTTQLICKLLRSREAAAAVDVRTWPLILDTDDLPKKRPAQICKPCNPDTLAYLDFSVSTTGMLAGVKMSHAATSAFCRSIKLQCELYPSREVAICLDPYCGLGFVLWCLCSVYSGHQSILIPPSELETNPALWLLAVSQYKVRDTFCSYSVMELCTKGLGSQTESLKARGLDLSRVRTCVVVAEERPRIALTQSFSKLFKDLGLHPRAVSTSFGCRVNLAICLQGTSGPDPTTVYVDMRALRHDRVRLVERGSPHSLPLMESGKILPGVRIIIANPETKGPLGDSHLGEIWVHSAHNASGYFTIYGDESLQSDHFNSRLSFGDTQTIWARTGYLGFLRRTELTDANGERHDALYVVGALDEAMELRGMRYHPIDIETSVIRAHKSVTECAVFTWTNLLVVVVELDGSEQEALDLVPLVTNVVLEEHYLIVGVVVVVDIGVIPINSRGEKQRMHLRDGFLADQLDPIYVAYNM", "length": 1556 }, "evidence": [ { "id": "A0A287BDU4", "url": "https://omabrowser.org/oma/group/A0A287BDU4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 1381, "end_pos": 1383, "annotation": "n_glycosylation_sequon" }, { "start_pos": 203, "end_pos": 205, "annotation": "n_glycosylation_sequon" }, { "start_pos": 492, "end_pos": 494, "annotation": "n_glycosylation_sequon" }, { "start_pos": 610, "end_pos": 612, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287BDU4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BDU4" }, { "id": "PS51912", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51912" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DMAP1-binding", "eco_id": "ECO_0000259", "start_pos": 7, "end_pos": 120, "start_aa": "Glu", "end_aa": "Val", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 67 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1381, "end_pos": 1383 }, { "start_pos": 203, "end_pos": 205 }, { "start_pos": 492, "end_pos": 494 }, { "start_pos": 610, "end_pos": 612 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287BB12-1", "uniprot_ac": "A0A287BB12", "uniprot_id": "A0A287BB12_PIG", "mass": { "chemical_mass": 102521.0, "monoisotopic_mass": 102521.0 }, "refseq": {}, "gene_names": [ { "name": "MCCC1", "type": "recommended", "evidence": [ { "id": "A0A287BB12", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BB12" } ] } ], "protein_names": [ { "name": "Methylcrotonyl-CoA carboxylase subunit 1", "type": "synonym", "evidence": [ { "id": "A0A287BB12", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BB12/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Biotin-attachment subunit of the 3-methylcrotonyl-CoA carboxylase, an enzyme that catalyzes the conversion of 3-methylcrotonyl-CoA to 3-methylglutaconyl-CoA, a critical step for leucine and isovaleric acid catabolism.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R4U0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4U0#function" }, { "database": "UniProtKB", "id": "ARBA00055202", "url": "https://www.uniprot.org/uniprotkb/ARBA00055202#function" }, { "database": "UniProtKB", "id": "A0A5G2R755", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R755#function" }, { "database": "UniProtKB", "id": "I3LT90", "url": "https://www.uniprot.org/uniprotkb/I3LT90#function" }, { "database": "UniProtKB", "id": "A0A287A8I4", "url": "https://www.uniprot.org/uniprotkb/A0A287A8I4#function" }, { "database": "UniProtKB", "id": "A0A5G2Q9R0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9R0#function" }, { "database": "UniProtKB", "id": "A0A5G2QEZ4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEZ4#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BB12", "url": "https://www.uniprot.org/uniprotkb/A0A287BB12" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MCCC1", "url": "https://www.uniprot.org/uniprotkb/A0A287BB12", "locus": { "chromosome": "13", "start_pos": 120915730, "end_pos": 121070369, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000025942", "url": "https://www.ensembl.org/id/ENSSSCG00000025942" } ] } } ], "crossref": [ { "id": "A0A287BB12", "url": "https://alphafold.ebi.ac.uk/entry/A0A287BB12", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000025942", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000025942", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd06850", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06850", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd14411", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd14411", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000089", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000089", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001882", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001882", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005176", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005176", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005479", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005479", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005481", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005481", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005482", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005482", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009060", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009060", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011053", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011053", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011054", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011054", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011761", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011761", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011764", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011764", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013815", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013815", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016185", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016185", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042460", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042460", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050856", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050856", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR18866", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR18866", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR18866:SF33", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR18866:SF33", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00289", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00289", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00364", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00364", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02785", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02785", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02786", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02786", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03556", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03556", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14555", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14555", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "13589", "url": "https://www.rhea-db.org/rhea/13589", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287A8I4", "url": "https://www.uniprot.org/uniprotkb/A0A287A8I4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A8I4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A8I4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BB12", "url": "https://www.uniprot.org/uniprotkb/A0A287BB12", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BB12-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BB12-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q9R0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9R0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q9R0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9R0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QEZ4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEZ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QEZ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEZ4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QNW6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNW6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QNW6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNW6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QSN0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QSN0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QSN0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QSN0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R4U0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4U0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R4U0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4U0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R755", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R755", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R755-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R755-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LT90", "url": "https://www.uniprot.org/uniprotkb/I3LT90", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LT90-1", "url": "https://www.uniprot.org/uniprotkb/I3LT90-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAASAVSVLLLTQRVTSLLLPPRGWAWKQRTMKYGTTTGRNITKILIANRGEIACRVIRTARKMGVQSVAVYSEADRNSMHVDMADEAYFIGPAPSQQSYLSMEKIIQVAKISAVQAIHPGYGFLSESMEFAELCKQEGIIFIGPPSSAIRDMGIKSTSKSIMAAAGVPIVEGYHGEDQSDQCLREHAGRIGYPVMIKAVRGGGGKGMRIIRSEKEFQEQLESARREAKQCVNDDVMMIEKFVDMPRHVEVQVFGDHHGNVVYLFERDCSVQRRYQKIIEEAPGPGIKPEVRKKLGEAAVRAAKAVNYVGAGTVEFIMDSKHNFYFMEMNTRLQVEHPVTEMITGIDLVEWQLRIAAGEKIPLSQEEITLQGHAFEARIYAEDPNDNFMPGAGPLVHLSTPQADLSTRIETGVQQGDEVSVHYDPMIAKLVVWAADRQAALTKLRYSLRYYNIVGLHTNINFLLSLTGHPEFEAGNVHTDFIPQHHKELLPSQKDTAKEFLCQAALGLILKEKPMSEAFRIQTQDRYSPFASSSGRRLNICYTRKMTLKDGKKDITIAVTYNRDGSYSMQIEDKTFHVLGDLYSEGDCTYLKSSINGVASKTKLIILENTIYLFSMDGSIQIGIPVPKYLSSVSSEGTQGSAIAPMTGTIEKNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLDRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLIDDFVEFARPQIAGTKSTTV", "length": 911, "header": "tr|A0A287BB12-1|A0A287BB12_PIG Isoform 1 of Methylcrotonyl-CoA carboxylase subunit 1 OS=Sus scrofa OX=9823 GN=MCCC1 PE=1 SV=2 CANONICAL=A0A287BB12-1" }, "isoforms": [ { "isoform_ac": "A0A287A8I4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A8I4/entry", "sequence": { "sequence": "MAAASAVSVLLLTQRVTSLLLPPRGWAWKQRTMKYGTTTGRNITKILIANRGEIACRVIRTARKMGVQSVAVYSEADRNSMHVDMADEAYFIGPAPSQQSYLSMEKIIQVAKISAVQAIHPGYGFLSESMEFAELCKQEGIIFIGPPSSAIRDMGIKSTSKSIMAAAGVPIVEGYHGEDQSDQCLREHAGRIGYPVMIKAVRGGGGKGMRIIRSEKEFQEQLESARREAKQCVNDDVMMIEKFVDMPRHVEVQVFGDHHGNVVYLFERDCSVQRRYQKIIEEAPGPGIKPEVRKKLGEAAVRAAKAVNYVGATVKVDITYHGKFCFLPLILEHPVTEMITGIDLVEWQLRIAAGEKIPLSQEEITLQGHAFEARIYAEDPNDNFMPGAGPLVHLSTPQADLSTRIETGVQQGDEVSVHYDPMIAKLVVWAADRQAALTKLRYSLRYYNIVGLHTNINFLLSLTGHPEFEAGNVHTDFIPQHHKELLPSQKDTAKEFLCQAALGLILKEKPMSEAFRIQTQDRYSPFASSSGRRLNICYTRKMTLKDGKKDITIAVTYNRDGSYSMQIEDKTFHVLGDLYSEGDCTYLKSSINGVASKTKLIILENTIYLFSMDGSIQIGIPVPKYLSSVSSEGTQGSAIAPMTGTIEKVFVKAGDKVKAGDSLMVMIAMKMEHTIKAPKDGTIKKVFYKEGSQANRHAPVVEFQEEGSDKKGTE", "length": 714, "header": "tr|A0A287A8I4-1|A0A287BB12_PIG Computationally mapped isoform of Methylcrotonyl-CoA carboxylase subunit 1 OS=Sus scrofa OX=9823 GN=MCCC1 PE=1 SV=3 CANONICAL=A0A287BB12-1" }, "locus": { "chromosome": "13", "start_pos": 121070247, "end_pos": 120983463, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051084.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051084.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000040122.3", "url": "https://www.ensembl.org/id/ENSSSCP00000040122.3" } ] } }, { "isoform_ac": "A0A287BB12-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BB12/entry", "sequence": { "sequence": "MAAASAVSVLLLTQRVTSLLLPPRGWAWKQRTMKYGTTTGRNITKILIANRGEIACRVIRTARKMGVQSVAVYSEADRNSMHVDMADEAYFIGPAPSQQSYLSMEKIIQVAKISAVQAIHPGYGFLSESMEFAELCKQEGIIFIGPPSSAIRDMGIKSTSKSIMAAAGVPIVEGYHGEDQSDQCLREHAGRIGYPVMIKAVRGGGGKGMRIIRSEKEFQEQLESARREAKQCVNDDVMMIEKFVDMPRHVEVQVFGDHHGNVVYLFERDCSVQRRYQKIIEEAPGPGIKPEVRKKLGEAAVRAAKAVNYVGAGTVEFIMDSKHNFYFMEMNTRLQVEHPVTEMITGIDLVEWQLRIAAGEKIPLSQEEITLQGHAFEARIYAEDPNDNFMPGAGPLVHLSTPQADLSTRIETGVQQGDEVSVHYDPMIAKLVVWAADRQAALTKLRYSLRYYNIVGLHTNINFLLSLTGHPEFEAGNVHTDFIPQHHKELLPSQKDTAKEFLCQAALGLILKEKPMSEAFRIQTQDRYSPFASSSGRRLNICYTRKMTLKDGKKDITIAVTYNRDGSYSMQIEDKTFHVLGDLYSEGDCTYLKSSINGVASKTKLIILENTIYLFSMDGSIQIGIPVPKYLSSVSSEGTQGSAIAPMTGTIEKNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLDRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLIDDFVEFARPQIAGTKSTTV", "length": 911, "header": "tr|A0A287BB12-1|A0A287BB12_PIG Isoform 1 of Methylcrotonyl-CoA carboxylase subunit 1 OS=Sus scrofa OX=9823 GN=MCCC1 PE=1 SV=2 CANONICAL=A0A287BB12-1" }, "locus": { "chromosome": "13", "start_pos": 121070247, "end_pos": 120916734, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040972.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040972.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053701.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053701.2" } ] } }, { "isoform_ac": "A0A5G2Q9R0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9R0/entry", "sequence": { "sequence": "IFPFLYIFFDFFGYGFLSESMEFAELCKQEGIIFIGPPSSAIRDMGIKSTSKSIMAAAGVPIVEGYHGEDQSDQCLREHAGRIGYPVMIKAVRGGGGKGMRIIRSEKEFQEQLESARREAKQCVNDDVMMIEKFVDMPRHVEVQVFGDHHGNVVYLFERDCSVQRRYQKIIEEAPGPGIKPEVRKKLGEAAVRAAKAVNYVGAGTVEFIMDSKHNFYFMEMNTRLQVEHPVTEMITGIDLVEWQLRIAAGEKIPLSQEEITLQGHAFEARIYAEDPNDNFMPGAGPLVHLSTPQADLSTRIETGVQQGDEVSVHYDPMIAKLVVWAADRQAALTKLRYSLRYYNIVGLHTNINFLLSLTGHPEFEAGNVHTDFIPQHHKELLPSQKDTAKEFLCQAALGLILKEKPMSEAFRIQTQDRYSPFASSSGRRLNICYTRKMTLKDGKKDITIAVTYNRDGSYSMQIEDKTFHVLGDLYSEGDCTYLKSSINGVASKTKLIILENTIYLFSMDGSIQIGIPVPKYLSSVSSEGTQGSAIAPMTGTIEKVFVKAGDKVKAGDSLMVMIAMKMEHTIKAPKDGTIKKVFYKEGSQANRHAPVVEFQEEGSDKKGTE", "length": 610, "header": "tr|A0A5G2Q9R0-1|A0A287BB12_PIG Computationally mapped isoform of Methylcrotonyl-CoA carboxylase subunit 1 OS=Sus scrofa OX=9823 GN=MCCC1 PE=1 SV=2 CANONICAL=A0A287BB12-1" }, "locus": { "chromosome": "13", "start_pos": 121036880, "end_pos": 120983463, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068245.2", "url": "https://www.ensembl.org/id/ENSSSCT00000068245.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060698.2", "url": "https://www.ensembl.org/id/ENSSSCP00000060698.2" } ] } }, { "isoform_ac": "A0A5G2QEZ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEZ4/entry", "sequence": { "sequence": "MEKIIQVAKISAVQGCGGTWNHHTLLVEMQNSIATLENWLVLKKAIHPGYGFLSESMEFAELCKQEGIIFIGPPSSAIRDMGIKSTSKSIMAAAGVPIVEGYHGEDQSDQCLREHAGRIGYPVMIKAVRGGGGKGMRIIRSEKEFQEQLESARREAKQCVNDDVMMIEKFVDMPRHVEVQVFGDHHGNVVYLFERDCSVQRRYQKIIEEAPGPGIKPEVRKKLGEAAVRAAKAVNYVGAGTVEFIMDSKHNFYFMEMNTRLQVEHPVTEMITGIDLVEWQLRIAAGEKIPLSQEEITLQGHAFEARIYAEDPNDNFMPGAGPLVHLSTPQADLSTRIETGVQQGDEVSVHYDPMIAKLVVWAADRQAALTKLRYSLRYYNIVGLHTNINFLLSLTGHPEFEAGNVHTDFIPQHHKELLPSQKDTAKEFLCQAALGLILKEKPMSEAFRIQTQDRYSPFASSSGRRLNICYTRKMTLKDGKKDITIAVTYNRDGSYSMQIEDKTFHVLGDLYSEGDCTYLKSSINGVASKTKLIILENTIYLFSMDGSIQIGIPVPKYLSSVSSEGTQGSAIAPMTGTIEKVFVKAGDKVKAGDSLMVMIAMKMEHTIKAPKDGTIKKVFYKEGSQANRHAPVVEFQEEGSDKKGTE", "length": 646, "header": "tr|A0A5G2QEZ4-1|A0A287BB12_PIG Computationally mapped isoform of Methylcrotonyl-CoA carboxylase subunit 1 OS=Sus scrofa OX=9823 GN=MCCC1 PE=1 SV=2 CANONICAL=A0A287BB12-1" }, "locus": { "chromosome": "13", "start_pos": 121052154, "end_pos": 120983463, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071700.2", "url": "https://www.ensembl.org/id/ENSSSCT00000071700.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063281.2", "url": "https://www.ensembl.org/id/ENSSSCP00000063281.2" } ] } }, { "isoform_ac": "A0A5G2QNW6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNW6/entry", "sequence": { "sequence": "MPAHWGWAWKQRTMKYGTTTGRNITKILIANRGEIACRVIRTARKMGVQSVAVYSEADRNSMHVDMADEAYFIGPAPSQQSYLSMEKIIQVAKISAVQAIHPGYGFLSESMEFAELCKQEGIIFIGPPSSAIRDMGIKSTSKSIMAAAGVPIVEGYHGEDQSDQCLREHAGRIGYPVMIKAVRGGGGKGMRIIRSEKEFQEQLESARREAKQCVNDDVMMIEKFVDMPRHVEVQVFGDHHGNVVYLFERDCSVQRRYQKIIEEAPGPGIKPEVRKKLGEAAVRAAKAVNYVGAGTVEFIMDSKHNFYFMEMNTRLQVEHPVTEMITGIDLVEWQLRIAAGEKIPLSQEEITLQGHAFEARIYAEDPNDNFMPGAGPLVHLSTPQADLSTRIETGVQQGDEVSVHYDPMIAKLVVWAADRQAALTKLRYSLRYYNIVGLHTNINFLLSLTGHPEFEAGNVHTDFIPQHHKELLPSQKDTAKEFLCQAALGLILKEKPMSEAFRIQTQDRYSPFASSSGRRLNICYTRKMTLKDGKKDITIAVTYNRDGSYSMQIEDKTFHVLGDLYSEGDCTYLKSSINGVASKTKLIILENTIYLFSMDGSIQIGIPVPKYLSSVSSEGTQGSAIAPMTGTIEKHTIKAPKDGTIKKVFYKEGSQANRHAPVVEFQEEGSDKKGTE", "length": 676, "header": "tr|A0A5G2QNW6-1|A0A287BB12_PIG Computationally mapped isoform of Methylcrotonyl-CoA carboxylase subunit 1 OS=Sus scrofa OX=9823 GN=MCCC1 PE=1 SV=2 CANONICAL=A0A287BB12-1" }, "locus": { "chromosome": "13", "start_pos": 121061816, "end_pos": 120983463, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091123.2", "url": "https://www.ensembl.org/id/ENSSSCT00000091123.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065755.2", "url": "https://www.ensembl.org/id/ENSSSCP00000065755.2" } ] } }, { "isoform_ac": "A0A5G2QSN0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QSN0/entry", "sequence": { "sequence": "MAAASAVSVLLLTQRVTSLLLPPRGWAWKQRTMKYGTTTGRNITKILIANRGEIACRVIRTARKMGVQSVAVYSEADRNSMHVDMADEAYFIGPAPSQQSYLSMEKIIQVAKISAVQAIHPGYGFLSESMEFAELCKQEGIIFIGPPSSAIRDMGIKSTSKSIMAAAGVPIVEGYHGEDQSDQCLREHAGRIGYPVMIKAVRGGGGKGMRIIRSEKEFQEQLESARREAKQCVNDDVMMIEKFVDMPRHVEVQVFGDHHGNVVYLFERDCSVQRRYQKIIEEAPGPGIKPEVRKKLGEAAVRAAKAVNYVGAGTVEFIMDSKHNFYFMEMNTRLQVEHPVTEMITGIDLVEWQLRIAAGEKIPLSQEEITLQGHAFEARIYAEDPNDNFMPGAGPLVHLSTPQADLSTRIETGVQQGDEVSVHYDPMIAKLVVWAADRQAALTKLRYSLRYYNIVGLHTNINFLLSLTGHPEFEAGNVHTDFIPQHHKELLPSQKDTAKEFLCQAALGLILKEKPMSEAFRIQTQDRYSPFASSSGRRLNICYTRKMTLKDGKKDITIAVTYNRDGSYSMQIEDKTFHVLGDLYSEGDCTYLKSSINGVASKTKLIILENTIYLFSMDGSIQIGIPVPKYLSSVSSEGTQGSAIAPMTGTIEKVMTRM", "length": 658, "header": "tr|A0A5G2QSN0-1|A0A287BB12_PIG Computationally mapped isoform of Methylcrotonyl-CoA carboxylase subunit 1 OS=Sus scrofa OX=9823 GN=MCCC1 PE=1 SV=1 CANONICAL=A0A287BB12-1" }, "locus": { "chromosome": "13", "start_pos": 121070247, "end_pos": 120987429, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071740.1", "url": "https://www.ensembl.org/id/ENSSSCT00000071740.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067136.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067136.1" } ] } }, { "isoform_ac": "A0A5G2R4U0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4U0/entry", "sequence": { "sequence": "MEKIIQVAKISAVQHIQSIMAAAGVPIVEGYHGEDQSDQCLREHAGRIGYPVMIKAVRGGGGKGMRIIRSEKEFQEQLESARREAKQCVNDDVMMIEKFVDMPRHVEVQVFGDHHGNVVYLFERDCSVQRRYQKIIEEAPGPGIKPEVRKKLGEAAVRAAKAVNYVGAGTVEFIMDSKHNFYFMEMNTRLQVEHPVTEMITGIDLVEWQLRIAAGEKIPLSQEEITLQGHAFEARIYAEDPNDNFMPGAGPLVHLSTPQADLSTRIETGVQQGDEVSVHYDPMIAKLVVWAADRQAALTKLRYSLRYYNIVGLHTNINFLLSLTGHPEFEAGNVHTDFIPQHHKELLPSQKDTAKEFLCQAALGLILKEKPMSEAFRIQTQDRYSPFASSSGRRLNICYTRKMTLKDGKKDITIAVTYNRDGSYSMQIEDKTFHVLGDLYSEGDCTYLKSSINGVASKTKLIILENTIYLFSMDGSIQIGIPVPKYLSSVSSEGTQGSAIAPMTGTIEKVFVKAGDKVKAGDSLMVMIAMKMEHTIKAPKDGTIKKVFYKEGSQANRHAPVVEFQEEGSDKKGTE", "length": 575, "header": "tr|A0A5G2R4U0-1|A0A287BB12_PIG Computationally mapped isoform of Methylcrotonyl-CoA carboxylase subunit 1 OS=Sus scrofa OX=9823 GN=MCCC1 PE=1 SV=1 CANONICAL=A0A287BB12-1" }, "locus": { "chromosome": "13", "start_pos": 121052154, "end_pos": 120983463, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069360.2", "url": "https://www.ensembl.org/id/ENSSSCT00000069360.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071348.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071348.1" } ] } }, { "isoform_ac": "A0A5G2R755-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R755/entry", "sequence": { "sequence": "MAAASAVSVLLLTQRVTSLLLPPRGWAWKQRTMKYGTTTGRNITKILIANRGEIACRVIRTARKMGVQSVAVYSEADRNSMHVDMADEAYFIGPAPSQQSYLSMEKIIQVAKISAVQAIHPGYGFLSESMEFAELCKQEGIIFIGPPSSAIRDMGIKSTSKSIMAAAGVPIVEGYHGEDQSDQCLREHAGRIGYPVMIKAVRGGGGKGMRIIRSEKEFQEQLESARREAKQCVNDDVMMIEKFVDMPRHVEVQVFGDHHGNVVYLFERDCSVQRRYQKIIEEAPGPGIKPEVRKKLGEAAVRAAKAVNYVGAAKICIMMLKMSDDGKHPCLVLYLNWKTFTVSPLGTVEFIMDSKHNFYFMEMNTRLQVEHPVTEMITGIDLVEWQLRIAAGEKIPLSQEEITLQGHAFEARIYAEDPNDNFMPGAGPLVHLSTPQADLSTRIETGVQQGDEVSVHYDPMIAKLVVWAADRQAALTKLRYSLRYYNIVGLHTNINFLLSLTGHPEFEAGNVHTDFIPQHHKELLPSQKDTAKEFLCQAALGLILKEKPMSEAFRIQTQDRYSPFASSSGRRLNICYTRKMTLKDGKKDITIAVTYNRDGSYSMQIEDKTFHVLGDLYSEGDCTYLKSSINGVASKTKLIILENTIYLFSMDGSIQIGIPVPKYLSSVSSEGTQGSAIAPMTGTIEKVFVKAGDKVKAGDSLMVMIAMKMEHTIKAPKDGTIKKVFYKEGSQANRHAPVVEFQEEGSDKKGTE", "length": 752, "header": "tr|A0A5G2R755-1|A0A287BB12_PIG Computationally mapped isoform of Methylcrotonyl-CoA carboxylase subunit 1 OS=Sus scrofa OX=9823 GN=MCCC1 PE=1 SV=2 CANONICAL=A0A287BB12-1" }, "locus": { "chromosome": "13", "start_pos": 121070247, "end_pos": 120983463, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079721.2", "url": "https://www.ensembl.org/id/ENSSSCT00000079721.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073082.2", "url": "https://www.ensembl.org/id/ENSSSCP00000073082.2" } ] } }, { "isoform_ac": "I3LT90-1", "url": "https://www.uniprot.org/uniprotkb/I3LT90/entry", "sequence": { "sequence": "MEQLQTGRNITKILIANRGEIACRVIRTARKMGVQSVAVYSEADRNSMHVDMAIHPGYGFLSESMEFAELCKQEGIIFIGPPSSAIRDMGIKSTSKSIMAAAGVPIVEGYHGEDQSDQCLREHAGRIGYPVMIKAVRGGGGKGMRIIRSEKEFQEQLESARREAKQCVNDDVMMIEKFVDMPRHVEVQVFGDHHGNVVYLFERDCSVQRRYQKIIEEAPGPGIKPEVRKKLGEAAVRAAKAVNYVGAGTVEFIMDSKHNFYFMEMNTRLQVEHPVTEMITGIDLVEWQLRIAAGEKIPLSQEEITLQGHAFEARIYAEDPNDNFMPGAGPLVHLSTPQADLSTRIETGVQQGDEVSVHYDPMIAKLVVWAADRQAALTKLRYSLRYYNIVGLHTNINFLLSLTGHPEFEAGNVHTDFIPQHHKELLPSQKDTAKEFLCQAALGLILKEKPMSEAFRIQTQDRYSPFASSSGRRLNICYTRKMTLKDGKKDITIAVTYNRDGSYSMQIEDKTFHVLGDLYSEGDCTYLKSSINGVASKTKLIILENTIYLFSMDGSIQIGIPVPKYLSSVSSEGTQGSAIAPMTGTIEKVFVKAGDKVKAGDSLMVMIAMKMEHTIKAPKDGTIKKVFYKEGSQANRHAPVVEFQEEGSDKKGTE", "length": 654, "header": "tr|I3LT90-1|A0A287BB12_PIG Computationally mapped isoform of Methylcrotonyl-CoA carboxylase subunit 1 OS=Sus scrofa OX=9823 GN=MCCC1 PE=1 SV=4 CANONICAL=A0A287BB12-1" }, "locus": { "chromosome": "13", "start_pos": 121059032, "end_pos": 120983463, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029315.4", "url": "https://www.ensembl.org/id/ENSSSCT00000029315.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000027334.4", "url": "https://www.ensembl.org/id/ENSSSCP00000027334.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9R0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9R0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB12", "url": "https://www.uniprot.org/uniprotkb/A0A287BB12" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB12", "url": "https://www.uniprot.org/uniprotkb/A0A287BB12" } ], "pmid": "" }, { "name": "methylcrotonoyl-CoA carboxylase activity", "id": "GO:0004485", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004485", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB12", "url": "https://www.uniprot.org/uniprotkb/A0A287BB12" } ], "pmid": "" }, { "name": "cullin family protein binding", "id": "GO:0097602", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097602", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB12", "url": "https://www.uniprot.org/uniprotkb/A0A287BB12" } ], "pmid": "" }, { "name": "ligase activity", "id": "GO:0016874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016874", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB12", "url": "https://www.uniprot.org/uniprotkb/A0A287BB12" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "mitochondrial matrix", "id": "GO:0005759", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005759", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB12", "url": "https://www.uniprot.org/uniprotkb/A0A287BB12" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB12", "url": "https://www.uniprot.org/uniprotkb/A0A287BB12" } ], "pmid": "" }, { "name": "methylcrotonoyl-CoA carboxylase complex", "id": "GO:1905202", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905202", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB12", "url": "https://www.uniprot.org/uniprotkb/A0A287BB12" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "positive regulation of protein neddylation", "id": "GO:2000436", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000436", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB12", "url": "https://www.uniprot.org/uniprotkb/A0A287BB12" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 42, "end_pos": 44, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "13589", "name": "", "equation": "3-methylbut-2-enoyl-CoA + hydrogencarbonate + ATP = 3-methyl-(2E)-glutaconyl-CoA + ADP + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "13589", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/13589" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287BB12-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 911, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287BB12-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287BB12" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287BB12", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BB12" }, { "id": "PS50975", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50975" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": 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"synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 42, "end_pos": 44 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B906-1", "uniprot_ac": "A0A287B906", "uniprot_id": "A0A287B906_PIG", "mass": { "chemical_mass": 80719.0, "monoisotopic_mass": 80719.0 }, "refseq": { "ac": "XP_005665433", "name": "nexilin isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005665433" }, "gene_names": [ { "name": "NEXN", "type": "recommended", "evidence": [ { "id": "A0A287B906", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B906" } ] }, { "name": "NEXN", "type": "synonym", "evidence": [ { "id": "XP_005665433", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005665433" } ] } ], "protein_names": [ { "name": "Nexilin", "type": "recommended", "evidence": [ { "id": "A0A287B906", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B906/entry#names_and_taxonomy" } ] }, { "name": "F-actin-binding protein", "type": "synonym", "evidence": [ { "id": "A0A287B906", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B906/entry#names_and_taxonomy" } ] }, { "name": "nexilin isoform X2", "type": "synonym", "evidence": [ { "id": "XP_005665433", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005665433" } ] } ], "function": [ { "annotation": "Involved in regulating cell migration through association with the actin cytoskeleton. Has an essential role in the maintenance of Z line and sarcomere integrity.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2Q2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2Q2#function" }, { "database": "UniProtKB", "id": "ARBA00058759", "url": "https://www.uniprot.org/uniprotkb/ARBA00058759#function" }, { "database": "UniProtKB", "id": "I3LAY6", "url": "https://www.uniprot.org/uniprotkb/I3LAY6#function" }, { "database": "UniProtKB", "id": "A0A287AN24", "url": "https://www.uniprot.org/uniprotkb/A0A287AN24#function" }, { "database": "UniProtKB", "id": "A0A287BDW8", "url": "https://www.uniprot.org/uniprotkb/A0A287BDW8#function" }, { "database": "UniProtKB", "id": "A0A287B906", "url": "https://www.uniprot.org/uniprotkb/A0A287B906#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B906", "url": "https://www.uniprot.org/uniprotkb/A0A287B906" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NEXN", "url": "https://www.uniprot.org/uniprotkb/A0A287B906", "locus": { "chromosome": "6", "start_pos": 135318754, "end_pos": 135382882, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000003768", "url": "https://www.ensembl.org/id/ENSSSCG00000003768" } ] } } ], "crossref": [ { "id": "A0A287B906", "url": "https://alphafold.ebi.ac.uk/entry/A0A287B906", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000003768", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000003768", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100510913", "url": "https://www.ncbi.nlm.nih.gov/gene/100510913", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003599", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003599", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013098", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013098", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100510913", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100510913", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NWTDKIE", "url": "https://omabrowser.org/oma/group/NWTDKIE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LAY6", "url": "https://www.orthodb.org/?gene=I3LAY6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21508", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21508", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21508:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21508:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07679", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07679", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005665433", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005665433", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AN24", "url": "https://www.uniprot.org/uniprotkb/A0A287AN24", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AN24-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AN24-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B906", "url": "https://www.uniprot.org/uniprotkb/A0A287B906", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B906-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B906-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BDW8", "url": "https://www.uniprot.org/uniprotkb/A0A287BDW8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BDW8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BDW8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2Q2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2Q2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2Q2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2Q2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LAY6", "url": "https://www.uniprot.org/uniprotkb/I3LAY6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LAY6-1", "url": "https://www.uniprot.org/uniprotkb/I3LAY6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNDISQKAEILLSSSKPVPKSYVPKLGKGDVKDKFEAMQRAREERNQRRSRDEKQRRKEQYIREREWNRRKQEIKEMLASDEEEVSSKIEKAYVPKLTGTVKGKFAEMEKQRQEEQRKRTEEERKRRIEQDMLEKRKIQRELAKRAEQIEDINNTGTESASEEGDDSLLVTVVPVKSHKTSGKIKKNFEDLEKEREEKERVKYEEDKRIRYEEQRRSLKEAKCLSLVMDDELENEAKKESFSPGKLKLTFEELERQRQENRRKQAEEEARKRLEEERRGFEEARRQMVNEEEENQDTENIFKAYRPGKLKLSFEEIERQRREDEKRKAEEEARRRIEEEKKAFAEARRSMAVDDDSPEMYKTISQESLTPGKLEINFEELLKQKMEEERRRTEEERKHKLEMEKQEFEQLRQEMGEEEEENETFELSREYEELIKLKRSGSIQAKNLKSKFEKIGQLSEKEIQKKIEEERARRRAIDLEIKEREAENFHEEEDVDVKPAKKSEAPFTHKVNMKARFERMAKAREEEEQRRIEEQKLLRMQFEQKEIDAALQKKREEEEEEEGSTMNGSTIEDEEETRSGAPWFKKPLKNTSVVDSEPVRFTVKVTGEPKPEITWWFEGELLQDGEDYQYIERGETYCLYLPETFPEDEGEYMCKAVNNKGSAASTCILTIESKN", "length": 674, "header": "tr|A0A287B906-1|A0A287B906_PIG Isoform 1 of Nexilin OS=Sus scrofa OX=9823 GN=NEXN PE=1 SV=2 CANONICAL=A0A287B906-1" }, "isoforms": [ { "isoform_ac": "A0A287AN24-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AN24/entry", "sequence": { "sequence": "MNDISQKAEIKEMLASDEEEVSSKIEKAYVPKLTGTVKGKFAEMEKQRQEEQRKRTEEERKRRIEQDMLEKRKIQRELAKRAEQEGDDSLLVTVVPVKSHKTSGKIKKNFEDLEKEREEKERVKYEEDKRIRYEEQRRSLKEAKCLSLVMDDELENEAKKESFSPGKLKLTFEELERQRQENRRKQAEEEARKRLEEERRGFEEARRQMVNEEEENQDTENIFKAYRPGKLKLSFEEIERQRREDEKRKAEEEARRRIEEEKKAFAEARRSMAVDDDSPEMYKTISQESLTPGKLEINFEELLKQKMEEERRRTEEERKHKLEMEKQEFEQLRQEMGEEEEENETFELSREYEELIKLKRSGSIQAKNLKSKFEKIGQLSEKEIQKKIEEERARRRAIDLEIKEREAENFHEEEDVDVKPAKKSEAPFTHKVNMKARFERMAKAREEEEQRRIEEQKLLRMQFEQKEIDAALQKKREEEEEEEGSTMNGSTIEDEEETRSGAPWFKKPLKNTSVVDSEPVRFTVKVTGEPKPEITWWFEGELLQDGEDYQYIERGETYCLYLPETFPEDEGEYMCKAVNNKGSAASTCILTIETDDY", "length": 597, "header": "tr|A0A287AN24-1|A0A287B906_PIG Computationally mapped isoform of Nexilin OS=Sus scrofa OX=9823 GN=NEXN PE=1 SV=3 CANONICAL=A0A287B906-1" }, "locus": { "chromosome": "6", "start_pos": 135351729, "end_pos": 135319734, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050548.3", "url": "https://www.ensembl.org/id/ENSSSCT00000050548.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045297.3", "url": "https://www.ensembl.org/id/ENSSSCP00000045297.3" } ] } }, { "isoform_ac": "A0A287B906-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B906/entry", "sequence": { "sequence": "MNDISQKAEILLSSSKPVPKSYVPKLGKGDVKDKFEAMQRAREERNQRRSRDEKQRRKEQYIREREWNRRKQEIKEMLASDEEEVSSKIEKAYVPKLTGTVKGKFAEMEKQRQEEQRKRTEEERKRRIEQDMLEKRKIQRELAKRAEQIEDINNTGTESASEEGDDSLLVTVVPVKSHKTSGKIKKNFEDLEKEREEKERVKYEEDKRIRYEEQRRSLKEAKCLSLVMDDELENEAKKESFSPGKLKLTFEELERQRQENRRKQAEEEARKRLEEERRGFEEARRQMVNEEEENQDTENIFKAYRPGKLKLSFEEIERQRREDEKRKAEEEARRRIEEEKKAFAEARRSMAVDDDSPEMYKTISQESLTPGKLEINFEELLKQKMEEERRRTEEERKHKLEMEKQEFEQLRQEMGEEEEENETFELSREYEELIKLKRSGSIQAKNLKSKFEKIGQLSEKEIQKKIEEERARRRAIDLEIKEREAENFHEEEDVDVKPAKKSEAPFTHKVNMKARFERMAKAREEEEQRRIEEQKLLRMQFEQKEIDAALQKKREEEEEEEGSTMNGSTIEDEEETRSGAPWFKKPLKNTSVVDSEPVRFTVKVTGEPKPEITWWFEGELLQDGEDYQYIERGETYCLYLPETFPEDEGEYMCKAVNNKGSAASTCILTIESKN", "length": 674, "header": "tr|A0A287B906-1|A0A287B906_PIG Isoform 1 of Nexilin OS=Sus scrofa OX=9823 GN=NEXN PE=1 SV=2 CANONICAL=A0A287B906-1" }, "locus": { "chromosome": "6", "start_pos": 135351729, "end_pos": 135319833, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055496.3", "url": "https://www.ensembl.org/id/ENSSSCT00000055496.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052970.2", "url": "https://www.ensembl.org/id/ENSSSCP00000052970.2" } ] } }, { "isoform_ac": "A0A287BDW8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BDW8/entry", "sequence": { "sequence": "MNDISQKAEILLSSSKPVPKSYVPKLGKGDVKDKFEAMQRAREERNQRRSRDEKQRRKEQYIREREWNRRKQEIKEMLASDEEEVSSKIEKAYVPKLTGTVKGKFAEMEKQRQEEQRKRTEEERKRRIEQDMLEKRKIQRELAKRAEQIEDINNTGTESASEEGDDSLLVTVVPVKSHKTSGKIKKNFEDLEKEREEKERVKYEEDKRIRYEEQRRSLKEAKCLSLVMDDELENEAKKESFSPGKLKLTFEELERQRQENRRKQAEEEARKRLEEERRGFEEARRQMVNEEEENQDTENIFKAYRPGKLKLSFEEIERQRREDEKRKAEEEARRRIEEEKKAFAEARRSMEEEENETFELSREYEELIKLKRSGSIQAKNLKSKFEKIGQLSEKEIQKKIEEERARRRAIDLEIKEREAENFHEEEDVDVKPAKKSEAPFTHKVNMKARFERMAKAREEEEQRRIEEQKLLRMQFEQKEIDAALQKKREEEEEEEGSTMNGSTIEDEEETRSGAPWFKKPLKNTSVVDSEPVRFTVKVTGEPKPEITWWFEGELLQDGEDYQYIERGETYCLYLPETFPEDEGEYMCKAVNNKGSAASTCILTIESKN", "length": 608, "header": "tr|A0A287BDW8-1|A0A287BDW8_PIG Computationally mapped isoform of Nexilin OS=Sus scrofa OX=9823 GN=NEXN PE=1 SV=3 CANONICAL=A0A287B906-1" }, "locus": { "chromosome": "6", "start_pos": 135351729, "end_pos": 135319833, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059512.3", "url": "https://www.ensembl.org/id/ENSSSCT00000059512.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054723.3", "url": "https://www.ensembl.org/id/ENSSSCP00000054723.3" } ] } }, { "isoform_ac": "A0A5G2R2Q2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2Q2/entry", "sequence": { "sequence": "MEKQRQEEQRKRTEEERKRRIEQDMLEKRKIQRELAKRAEQEGDDSLLVTVVPVKSHKTSGKIKKNFEDLEKEREEKERVKYEEDKRIRYEEQRRSLKEAKCLSLVMDDELENEAKKESFSPGKLKLTFEELERQRQENRRKQAEEEARKRLEEERRGFEEARRQMVNEEEENQDTENIFKAYRPGKLKLSFEEIERQRREDEKRKAEEEARRRIEEEKKAFAEARRSMAVDDDSPEMYKTISQESLTPGKLEINFEELLKQKMEEERRRTEEERKHKLEMEKQEFEQLRQEMGEEEEENETFELSREYEELIKLKRSGSIQAKNLKSKFEKIGQLSEKEIQKKIEEERARRRAIDLEIKEREAENFHEEEDVDVKPAKKSEAPFTHKVNMKARFERMAKAREEEEQRRIEEQKLLRMQFEQKEIDAALQKKREEEEEEEGSTMNGSTIEDEEETRSGAPWFKKPLKNTSVVDSEPVRFTVKVTGEPKPEITWWFEGELLQDGEDYQYIERGETYCLYLPETFPEDEGEYMCKAVNNKGSAASTCILTIESKN", "length": 553, "header": "tr|A0A5G2R2Q2-1|A0A287B906_PIG Computationally mapped isoform of Nexilin OS=Sus scrofa OX=9823 GN=NEXN PE=1 SV=2 CANONICAL=A0A287B906-1" }, "locus": { "chromosome": "6", "start_pos": 135349650, "end_pos": 135319833, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074638.2", "url": "https://www.ensembl.org/id/ENSSSCT00000074638.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068482.2", "url": "https://www.ensembl.org/id/ENSSSCP00000068482.2" } ] } }, { "isoform_ac": "I3LAY6-1", "url": "https://www.uniprot.org/uniprotkb/I3LAY6/entry", "sequence": { "sequence": "MNDISQKAEILLSSSKPVPKSYVPKLGKGDVKDKFEAMQRAREERNQRRSRDEKQRRKEQYIREREWNRRKQEIKEMLASDEEEVSSKIEKAYVPKLTGTVKGKFAEMEKQRQEEQRKRTEEERKRRIEQDMLEKRKIQRELAKRAEQIEDINNTGTESASEEGDDSLLVTVVPVKSHKTSGKIKKNFEDLEKEREEKERVKYEEDKRIRYEEQRRSLKEAKCLSLVMDDELENEAKKESFSPGKLKLTFEELERQRQENRRKQAEEEARKRLEEERRGFEEARRQMVNEEEENQDTENIFKAYRPGKLKLSFEEIERQRREDEKRKAEEEARRRIEEEKKAFAEARRSMAVDDDSPEMYKTISQESLTPGKLEINFEELLKQKMEEERRRTEEERKHKLEMEKQEFEQLRQEMGEEEEENETFELSREYEELIKLKRSGSIQAKNLKSKFEKIGQLSEKEIQKKIEEERARRRAIDLEIKEREAENFHEEEDVDVKPAKKSEAPFTHKVNMKARFERMAKAREEEEQRRIEEQKLLRMQFEQKEIDAALQKKREEEEEEEGSTMNGSTIEDEEETRSGAPWFKKPLKNTSVVDSEPVRFTVKVTGEPKPEITWWFEGELLQDGEDYQYIERGETYCLYLPETFPEDEGEYMCKAVNNKGSAASTCILTIETDDY", "length": 675, "header": "tr|I3LAY6-1|A0A287B906_PIG Computationally mapped isoform of Nexilin OS=Sus scrofa OX=9823 GN=NEXN PE=1 SV=2 CANONICAL=A0A287B906-1" }, "locus": { "chromosome": "6", "start_pos": 135351729, "end_pos": 135319734, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029114.3", "url": "https://www.ensembl.org/id/ENSSSCT00000029114.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021204.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021204.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2Q2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2Q2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100510913", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100510913", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q0ZGT2-1", "protein_name": "Nexilin", "gene_name": "NEXN", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNDISQKAEILLSSSKPVPKTYVPKLGKGDVKDKFEAMQRAREERNQRRSRDEKQRRKEQYIREREWNRRKQEIKEMLASDDEEDVSSKVEKAYVPKLTGTVKGRFAEMEKQRQEEQRKRTEEERKRRIEQDMLEKRKIQRELAKRAEQIEDINNTGTESASEEGDDSLLITVVPVKSYKTSGKMKKNFEDLEKEREEKERIKYEEDKRIRYEEQRPSLKEAKCLSLVMDDEIESEAKKESLSPGKLKLTFEELERQRQENRKKQAEEEARKRLEEEKRAFEEARRQMVNEDEENQDTAKIFKGYRPGKLKLSFEEMERQRREDEKRKAEEEARRRIEEEKKAFAEARRNMVVDDDSPEMYKTISQEFLTPGKLEINFEELLKQKMEEEKRRTEEERKHKLEMEKQEFEQLRQEMGEEEEENETFGLSREYEELIKLKRSGSIQAKNLKSKFEKIGQLSEKEIQKKIEEERARRRAIDLEIKEREAENFHEEDDVDVRPARKSEAPFTHKVNMKARFEQMAKAREEEEQRRIEEQKLLRMQFEQREIDAALQKKREEEEEEEGSIMNGSTAEDEEQTRSGAPWFKKPLKNTSVVDSEPVRFTVKVTGEPKPEITWWFEGEILQDGEDYQYIERGETYCLYLPETFPEDGGEYMCKAVNNKGSAASTCILTIESKN", "length": 675 }, "evidence": [ { "id": "A0A287B906", "url": "https://omabrowser.org/oma/group/A0A287B906/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q7TPW1-1", "protein_name": "Nexilin", "gene_name": "Nexn", "tax_id": 10090, "organism": "Mus musculus", 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"OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11647", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11647", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11647:SF54", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11647:SF54", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01979", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01979", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-399956", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-399956", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020956642", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020956642", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287A9G1", "url": "https://www.uniprot.org/uniprotkb/A0A287A9G1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A9G1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A9G1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BBD8", "url": "https://www.uniprot.org/uniprotkb/A0A287BBD8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BBD8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBD8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5K1VI86", "url": "https://www.uniprot.org/uniprotkb/A0A5K1VI86", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5K1VI86-1", "url": "https://www.uniprot.org/uniprotkb/A0A5K1VI86-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F8G7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F8G7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F8G7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F8G7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LEA3", "url": "https://www.uniprot.org/uniprotkb/I3LEA3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LEA3-1", "url": "https://www.uniprot.org/uniprotkb/I3LEA3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MADRRRAWNTEDDLPVYLARPGSAAQTPRQKYGGMFAAVEGAYENKTIDFDAYSVGRRGSARTPRSAGRLDSVGLPGPGGSEDTASDVSEPSGSAVSSPGERDERPPALRIRCPAPRDLPLGRDNGQSDRLLIKGGRIINDDQSFYADVYLEDGLIKQIGENLIVPGGVKTVEANGRMVIPGGIDVNTYLQKPSQGMTAADDFFQGTKAALVGGTTMIIDHVVPEPGSSLLTSFEKWHEAADTKSCCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDLYQMSDSQLYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYITKVMSKSAADIITLARKKGPLVFGEPIAASLGSDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKVKTITAKSHKSAVEYNIFEGMECHGSPLAVISQGKIVFEDGNINVSKGMGRFIPRKPFPEYLYQRVRIRNKVSGLQGVPRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQSNFSLSGAQIDDNNPRRTGHRIVAPPGGRSNITSLG", "length": 686, "header": "tr|A0A287BBD8-1|A0A287BBD8_PIG Isoform 1 of Dihydropyrimidinase-related protein 1 OS=Sus scrofa OX=9823 GN=CRMP1 PE=1 SV=1 CANONICAL=A0A287BBD8-1" }, "isoforms": [ { "isoform_ac": "A0A287A9G1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A9G1/entry", "sequence": { "sequence": "MSYQGKKSIPHITSDRLLIKGGRIINDDQSFYADVYLEDGLIKQIGENLIVPGGVKTVEANGRMVIPGGIDVNTYLQKPSQGMTAADDFFQGTKAALVGGTTMIIDHVVPEPGSSLLTSFEKWHEAADTKSCCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDLYQMSDSQLYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYITKVMSKSAADIITLARKKGPLVFGEPIAASLGSDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKVKTITAKSHKSAVEYNIFEGMECHGSPLAVISQGKIVFEDGNINVSKGMGRFIPRKPFPEYLYQRVRIRNKVSGLQGVPRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQSNFSLSGAQIDDNNPRRTGHRIVAPPGGRSNITSLG", "length": 572, "header": "tr|A0A287A9G1-1|A0A287BBD8_PIG Computationally mapped isoform of Dihydropyrimidinase-related protein 1 OS=Sus scrofa OX=9823 GN=CRMP1 PE=1 SV=1 CANONICAL=A0A287BBD8-1" }, "locus": { "chromosome": "8", "start_pos": 4804661, "end_pos": 4738892, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064701.2", "url": "https://www.ensembl.org/id/ENSSSCT00000064701.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000040644.1", "url": "https://www.ensembl.org/id/ENSSSCP00000040644.1" } ] } }, { "isoform_ac": "A0A287BBD8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBD8/entry", "sequence": { "sequence": "MADRRRAWNTEDDLPVYLARPGSAAQTPRQKYGGMFAAVEGAYENKTIDFDAYSVGRRGSARTPRSAGRLDSVGLPGPGGSEDTASDVSEPSGSAVSSPGERDERPPALRIRCPAPRDLPLGRDNGQSDRLLIKGGRIINDDQSFYADVYLEDGLIKQIGENLIVPGGVKTVEANGRMVIPGGIDVNTYLQKPSQGMTAADDFFQGTKAALVGGTTMIIDHVVPEPGSSLLTSFEKWHEAADTKSCCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDLYQMSDSQLYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYITKVMSKSAADIITLARKKGPLVFGEPIAASLGSDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKVKTITAKSHKSAVEYNIFEGMECHGSPLAVISQGKIVFEDGNINVSKGMGRFIPRKPFPEYLYQRVRIRNKVSGLQGVPRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQSNFSLSGAQIDDNNPRRTGHRIVAPPGGRSNITSLG", "length": 686, "header": "tr|A0A287BBD8-1|A0A287BBD8_PIG Isoform 1 of Dihydropyrimidinase-related protein 1 OS=Sus scrofa OX=9823 GN=CRMP1 PE=1 SV=1 CANONICAL=A0A287BBD8-1" }, "locus": { "chromosome": "8", "start_pos": 4804661, "end_pos": 4734260, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037947.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037947.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053425.1", "url": "https://www.ensembl.org/id/ENSSSCP00000053425.1" } ] } }, { "isoform_ac": "A0A5K1VI86-1", "url": "https://www.uniprot.org/uniprotkb/A0A5K1VI86/entry", "sequence": { "sequence": "RQKSDRLLIKGGRIINDDQSFYADVYLEDGLIKQIGENLIVPGGVKTVEANGRMVIPGGIDVNTYLQKPSQGMTAADDFFQGTKAALVGGTTMIIDHVVPEPGSSLLTSFEKWHEAADTKSCCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDLYQMSDSQLYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYITKVMSKSAADIITLARKKGPLVFGEPIAASLGSDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKVKTITAKSHKSAVEYNIFEGMECHGSPLAVISQGKIVFEDGNINVSKGMGRFIPRKPFPEYLYQRVRIRNKVSGLQGVPRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQSNFSLSGAQIDDNNPRRTGHRIVAPPGGRSNITSLG", "length": 562, "header": "tr|A0A5K1VI86-1|A0A287BBD8_PIG Computationally mapped isoform of Dihydropyrimidinase-related protein 1 OS=Sus scrofa OX=9823 GN=CRMP1 PE=1 SV=2 CANONICAL=A0A287BBD8-1" }, "locus": { "chromosome": "8", "start_pos": 4804661, "end_pos": 4759530, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026171.4", "url": "https://www.ensembl.org/id/ENSSSCT00000026171.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000025510.4", "url": "https://www.ensembl.org/id/ENSSSCP00000025510.4" } ] } }, { "isoform_ac": "A0A8W4F8G7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F8G7/entry", "sequence": { "sequence": "RQKVKSDRLLIKGGRIINDDQSFYADVYLEDGLIKQIGENLIVPGGVKTVEANGRMVIPGGIDVNTYLQKPSQGMTAADDFFQGTKAALVGGTTMIIDHVVPEPGSSLLTSFEKWHEAADTKSCCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDLYQMSDSQLYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYITKVMSKSAADIITLARKKGPLVFGEPIAASLGSDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKVKTITAKSHKSAVEYNIFEGMECHGSPLAVISQGKIVFEDGNINVSKGMGRFIPRKPFPEYLYQRVRIRNKVSGLQGVPRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQSNFSLSGAQIDDNNPRRTGHRIVAPPGGRSNITSLG", "length": 564, "header": "tr|A0A8W4F8G7-1|A0A287BBD8_PIG Computationally mapped isoform of Dihydropyrimidinase-related protein 1 OS=Sus scrofa OX=9823 GN=CRMP1 PE=1 SV=1 CANONICAL=A0A287BBD8-1" }, "locus": { "chromosome": "8", "start_pos": 4804661, "end_pos": 4737548, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105563.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105563.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075110.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075110.1" } ] } }, { "isoform_ac": "I3LEA3-1", "url": "https://www.uniprot.org/uniprotkb/I3LEA3/entry", "sequence": { "sequence": "MAPAAGGFWASGPHYPPPTQTFPGGPPGCGAAHLWRGPRLPLRSRSPSLAFKRALKRRPTQSRERGRGLRRACAPGGGRRGWAVEGGEGRSRGIGREALPGSRREGRIGLHSAPPGGAVCLQPPPPALAAPSSSRPRRRAGRCSQPERRRAGRAAGPAGRVGSRGRRASSLLFAAPGPLSPRPRGAGPRESRTERKPAPGVRRPGRGRQRGAMSYQGKKSIPHITSDRLLIKGGRIINDDQSFYADVYLEDGLIKQIGENLIVPGGVKTVEANGRMVIPGGIDVNTYLQKPSQGMTAADDFFQGTKAALVGGTTMIIDHVVPEPGSSLLTSFEKWHEAADTKSCCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDLYQMSDSQLYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYITKVMSKSAADIITLARKKGPLVFGEPIAASLGSDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKVKTITAKSHKSAVEYNIFEGMECHGSPLAVISQGKIVFEDGNINVSKGMGRFIPRKPFPEYLYQRVRIRNKVSGLQGVPRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQSNFSLSGAQIDDNNPRRTGHRIVAPPGGRSNITSLG", "length": 784, "header": "tr|I3LEA3-1|A0A287BBD8_PIG Computationally mapped isoform of Dihydropyrimidinase-related protein 1 OS=Sus scrofa OX=9823 GN=CRMP1 PE=1 SV=3 CANONICAL=A0A287BBD8-1" }, "locus": { "chromosome": "8", "start_pos": 4804661, "end_pos": 4738256, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030783.4", "url": "https://www.ensembl.org/id/ENSSSCT00000030783.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022390.3", "url": "https://www.ensembl.org/id/ENSSSCP00000022390.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 628, "start_aa": "Thr", "end_pos": 628, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr628", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5K1VI86", "url": "https://www.uniprot.org/uniprotkb/A0A5K1VI86" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100520574", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520574", "resource": "KEGG Pathway" }, { "id": "R-SSC-399956", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-399956", "resource": "Reactome", "description": "CRMPs in Sema3A signaling" } ], "orthologs": [ { "uniprot_canonical_ac": "P97427-1", "protein_name": "Dihydropyrimidinase-related protein 1", "gene_name": "Crmp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSHQGKKSIPHITSDRLLIRGGRIINDDQSFYADVYLEDGLIKQIGENLIVPGGVKTIEANGRMVIPGGIDVNTYLQKPSQGMTSADDFFQGTKAALAGGTTMIIDHVVPEPGSSLLTSFEKWHEAADTKSCCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDLYQMSDSQLYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAIAIAGRINCPVYITKVMSKSAADIIALARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKMKTITAKSHKSTVEYNIFEGMECHGSPLVVISQGKIVFEDGNISVSKGMGRFIPRKPFPEHLYQRVRIRSKVFGLHSVSRGMYDGPVYEVPATPKHAAPAPSAKSSPSKHQPPPIRNLHQSNFSLSGAQIDDNNPRRTGHRIVAPPGGRSNITSLG", "length": 572 }, "evidence": [ { "id": "A0A287BBD8", "url": "https://omabrowser.org/oma/group/A0A287BBD8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q14194-1", "protein_name": "Dihydropyrimidinase-related protein 1", "gene_name": "CRMP1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSYQGKKSIPHITSDRLLIKGGRIINDDQSLYADVYLEDGLIKQIGENLIVPGGVKTIEANGRMVIPGGIDVNTYLQKPSQGMTAADDFFQGTRAALVGGTTMIIDHVVPEPGSSLLTSFEKWHEAADTKSCCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDVYQMSDSQLYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYITKVMSKSAADIIALARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVEYNIFEGMECHGSPLVVISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQGVSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQSNFSLSGAQIDDNNPRRTGHRIVAPPGGRSNITSLG", "length": 572 }, "evidence": [ { "id": "A0A287BBD8", "url": "https://omabrowser.org/oma/group/A0A287BBD8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q62950-1", "protein_name": "Dihydropyrimidinase-related protein 1", "gene_name": "Crmp1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSHQGKKSIPHITSDRLLIRGGRIINDDQSFYADVYLEDGLIKQIGENLIVPGGVKTIEANGRMVIPGGIDVNTYLQKPSQGMTSADDFFQGTRAALAGGTTMIIDHVVPEPGSSLLTSFEKWHEAADTKSCCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDLYQMSDSQLYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAIAIAGRINCPVYITKVMSKSAADIIALARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKMKTLTAKSHKSTVEYNIFEGMECHGSPLVVISQGKIVFEDGNISVSKGMGRFIPRKPFPEHLYQRVRIRSKVFGLHSVSRGMYDGPVYEVPATPKHAAPAPSAKSSPSKHQPPPIRNLHQSNFSLSGAQIDDNNPRRTGHRIVAPPGGRSNITSLG", "length": 572 }, "evidence": [ { "id": "A0A287BBD8", "url": "https://omabrowser.org/oma/group/A0A287BBD8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 11, "go_terms": [ { "name": "centrosome", "id": "GO:0005813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005813", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBD8", "url": "https://www.uniprot.org/uniprotkb/A0A287BBD8" } ], "pmid": "" }, { "name": "spindle", "id": "GO:0005819", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005819", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBD8", "url": "https://www.uniprot.org/uniprotkb/A0A287BBD8" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBD8", "url": "https://www.uniprot.org/uniprotkb/A0A287BBD8" } ], "pmid": "" }, { "name": "actin cytoskeleton", "id": "GO:0015629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015629", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBD8", "url": "https://www.uniprot.org/uniprotkb/A0A287BBD8" } ], "pmid": "" }, { "name": "dendrite", "id": "GO:0030425", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030425", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBD8", "url": "https://www.uniprot.org/uniprotkb/A0A287BBD8" } ], "pmid": "" }, { "name": "growth cone", "id": "GO:0030426", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030426", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBD8", "url": "https://www.uniprot.org/uniprotkb/A0A287BBD8" } ], "pmid": "" }, { "name": "perikaryon", "id": "GO:0043204", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043204", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBD8", "url": "https://www.uniprot.org/uniprotkb/A0A287BBD8" } ], "pmid": "" }, { "name": "postsynapse", "id": "GO:0098794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098794", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBD8", "url": "https://www.uniprot.org/uniprotkb/A0A287BBD8" } ], "pmid": "" }, { "name": "midbody", "id": "GO:0030496", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030496", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBD8", "url": "https://www.uniprot.org/uniprotkb/A0A287BBD8" } ], "pmid": "" }, 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"MATSPQKSPSVPKSPTPKSPPSRKKDDSFLGKLGGTLARRKKAKEVSELQEEGMNAINLPLSPIPFELDPEDTMLEENEVRTMVDPNSRSDPKLQELMKVLIDWINDVLVGERIIVKDLAEDLYDGQVLQKLFEKLESEKLNVAEVTQSEIAQKQKLQTVLEKINETLKLPPRSIKWNVDSVHAKSLVAILHLLVALSQYFRAPIRLPDHVSIQVVVVQKREGILQSRQIQEEITALGSTSLSSFSERDAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYRNVE", "length": 373, "header": "tr|A0A5G2QJH9-1|A0A287B7K9_PIG Computationally mapped isoform of Parvin alpha OS=Sus scrofa OX=9823 GN=PARVA PE=1 SV=1 CANONICAL=A0A287B7K9-1" }, "locus": { "chromosome": "2", "start_pos": 47027924, "end_pos": 46841813, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080233.1", "url": "https://www.ensembl.org/id/ENSSSCT00000080233.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064956.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064956.1" } ] } }, { "isoform_ac": "A0A5G2R583-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R583/entry", "sequence": { "sequence": "MATSPQKSPSVPKSPTPKSPPSRKKDDSFLGKLGGTLARRKKAKEVSELQEEGMNAINLPLSPIPFELDPEDTMLEENEVRTMVDPNSRSDPKLQELMKVLIDWINDVLVGERIIVKDLAEDLYDGQVLQKLFEKLESEKLNVAEVTQSEIAQKQKLQTVLEKINETLKLPPRSIKWNVDSVHAKSLVAILHLLVALSQYFRAPIRLPDHVSIQVVVVQVNAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYRNVE", "length": 345, "header": "tr|A0A5G2R583-1|A0A287B7K9_PIG Computationally mapped isoform of Parvin alpha OS=Sus scrofa OX=9823 GN=PARVA PE=1 SV=2 CANONICAL=A0A287B7K9-1" }, "locus": { "chromosome": "2", "start_pos": 47027924, "end_pos": 46841813, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087765.2", "url": "https://www.ensembl.org/id/ENSSSCT00000087765.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071479.2", "url": "https://www.ensembl.org/id/ENSSSCP00000071479.2" } ] } }, { "isoform_ac": "A0A8W4FLG7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FLG7/entry", "sequence": { "sequence": "VGCSVTLCFLLAVSELQEEGMNAINLPLSPIPFELDPEDTMLEENEVRTMVDPNSRSDPKLQELMKVLIDWINDVLVGERIIVKDLAEDLYDGQVLQKLFEKLESEKLNVAEVTQSEIAQKQKLQTVLEKINETLKLPPRSIKWNVDCDANHFFCIFLMHVFLSSSQPSPHPRFQKREGILQSRQIQEEITALGSTSLSSFSERDAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYRNVE", "length": 329, "header": "tr|A0A8W4FLG7-1|A0A287B7K9_PIG Computationally mapped isoform of Parvin alpha OS=Sus scrofa OX=9823 GN=PARVA PE=1 SV=1 CANONICAL=A0A287B7K9-1" }, "locus": { "chromosome": "2", "start_pos": 46910273, "end_pos": 46841813, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092396.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092396.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080052.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080052.1" } ] } }, { "isoform_ac": "I3L973-1", "url": "https://www.uniprot.org/uniprotkb/I3L973/entry", "sequence": { "sequence": "MATSPQKSPSVPKSPTPKSPPSRKKDDSFLGKLGGTLARRKKAKEVSELQEEGMNAINLPLSPIPFELDPEDTMLEENEVRTMVDPNSRSDPKLQELMKVLIDWINDVLVGERIIVKDLAEDLYDGQVLQKLFEKLESEKLNVAEVTQSEIAQKQKLQTVLEKINETLKLPPRSIKWNVDSVHAKSLVAILHLLVALSQYFRAPIRLPDHVSIQVVVVQKREGILQSRQIQEEITALGSTSLSSFSERDAFDTLFDHAPDKLNVVKKFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYRNVE", "length": 350, "header": "tr|I3L973-1|A0A287B7K9_PIG Computationally mapped isoform of Parvin alpha OS=Sus scrofa OX=9823 GN=PARVA PE=1 SV=3 CANONICAL=A0A287B7K9-1" }, "locus": { "chromosome": "2", "start_pos": 47027924, "end_pos": 46841813, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028332.3", "url": "https://www.ensembl.org/id/ENSSSCT00000028332.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020585.3", "url": "https://www.ensembl.org/id/ENSSSCP00000020585.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCR7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCR7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-446343", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-446343", "resource": "Reactome", 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"categories": [ "Protein" ] } ], "sequence": { "sequence": "MSNELDFRSVRLLKNDPVNFQKFPYTTEDEAWKTYLENPLTAATKAMMRVNGDDDSVAALSFLYDYYMGPKEKRILSSSTGGRNDQGKRYYHGMECEMDLTPLESPTHLMKFLTENVSGTPEYPDVLKKSSLMSLEGAAPAAGKAALLPPGPSKLEAGSVDSYLLPTSDVYDNGSLSSLFESIHGVPPTQRWQPDSTFKDDPQESLLFPDILKTSQEPPCPEDYPSPKSDFEYTLGSPKAIHIKSGESPMAYLNKGQFYPVTLRTPAGGKGLALSSNKVKSVVMVVFDNEKVPLEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVQHIEEVAYNALSFVWNVNEEAKVFIGVNCLSTDFSSQKGVKGVPLNLQIDTYDCGSGTERLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKIKCPDSSNSGIKGSLLSGFRGNETTYLRPEADLETPPVLFIPNVHFSGLQRSGGAVLSAGHSSSNRLPLKRTCSPFTEEFEPLPSKQAKEDDLQRVLLYVRRETEEVFDALMLKTPDLKGLRNAISEKYGFPEENIHKVYKKCKRGILVNMDNNIIQHYSNHVAFLLDMGELDGKIQIILKEL", "length": 602, "header": "tr|A0A287B8R5-1|A0A287B8R5_PIG Isoform 1 of Grainyhead like transcription factor 3 OS=Sus scrofa OX=9823 GN=GRHL3 PE=4 SV=1 CANONICAL=A0A287B8R5-1" }, "isoforms": [ { "isoform_ac": "A0A287B8R5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B8R5/entry", "sequence": { "sequence": "MSNELDFRSVRLLKNDPVNFQKFPYTTEDEAWKTYLENPLTAATKAMMRVNGDDDSVAALSFLYDYYMGPKEKRILSSSTGGRNDQGKRYYHGMECEMDLTPLESPTHLMKFLTENVSGTPEYPDVLKKSSLMSLEGAAPAAGKAALLPPGPSKLEAGSVDSYLLPTSDVYDNGSLSSLFESIHGVPPTQRWQPDSTFKDDPQESLLFPDILKTSQEPPCPEDYPSPKSDFEYTLGSPKAIHIKSGESPMAYLNKGQFYPVTLRTPAGGKGLALSSNKVKSVVMVVFDNEKVPLEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVQHIEEVAYNALSFVWNVNEEAKVFIGVNCLSTDFSSQKGVKGVPLNLQIDTYDCGSGTERLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKIKCPDSSNSGIKGSLLSGFRGNETTYLRPEADLETPPVLFIPNVHFSGLQRSGGAVLSAGHSSSNRLPLKRTCSPFTEEFEPLPSKQAKEDDLQRVLLYVRRETEEVFDALMLKTPDLKGLRNAISEKYGFPEENIHKVYKKCKRGILVNMDNNIIQHYSNHVAFLLDMGELDGKIQIILKEL", "length": 602, "header": "tr|A0A287B8R5-1|A0A287B8R5_PIG Isoform 1 of Grainyhead like transcription factor 3 OS=Sus scrofa OX=9823 GN=GRHL3 PE=4 SV=1 CANONICAL=A0A287B8R5-1" }, "locus": { "chromosome": "6", "start_pos": 82049448, "end_pos": 82014268, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058757.3", "url": "https://www.ensembl.org/id/ENSSSCT00000058757.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052472.1", "url": "https://www.ensembl.org/id/ENSSSCP00000052472.1" } ] } }, { "isoform_ac": "A0A4X1VWD6-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VWD6/entry", "sequence": { "sequence": "MMRVNGDDDSVAALSFLYDYYMGPKEKRILSSSTGGRNDQGKRYYHGMECEMDLTPLESPTHLMKFLTENVSGTPEYPDVLKKSSLMSLEGAAPAAGKAALLPPGPSKLEAGSVDSYLLPTSDVYDNGSLSSLFESIHGVPPTQRWQPDSTFKDDPQESLLFPDILKTSQEPPCPEDYPSPKSDFEYTLGSPKAIHIKSGESPMAYLNKGQFYPVTLRTPAGGKGLALSSNKVKSVVMVVFDNEKVPLEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVQHIEEVAYNALSFVWNVNEEAKVFIGVNCLSTDFSSQKGVKGVPLNLQIDTYDCGSGTERLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKIKCPDSSNSGIKGSLLSGFRGNETTYLRPEADLETPPVLFIPNVHFSGLQRSGGAVLSAGHSSSNRLPLKRTCSPFTEEFEPLPSKQAKEDDLQRVLLYVRRETEEVFDALMLKTPDLKGLRNAISEKYGFPEENIHKVYKKCKRGILVNMDNNIIQHYSNHVAFLLDMGELDGKIQIILKEL", "length": 556, "header": "tr|A0A4X1VWD6-1|A0A287B8R5_PIG Computationally mapped isoform of Grainyhead like transcription factor 3 OS=Sus scrofa OX=9823 GN=GRHL3 PE=4 SV=1 CANONICAL=A0A287B8R5-1" }, "locus": { "chromosome": "6", "start_pos": 82049448, "end_pos": 82026643, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000003931.4", "url": "https://www.ensembl.org/id/ENSSSCT00000003931.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000003840.3", "url": "https://www.ensembl.org/id/ENSSSCP00000003840.3" } ] } }, { "isoform_ac": "A0A5G2RGM9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RGM9/entry", "sequence": { "sequence": "MQVNSMLPIFLFRSVRLLKNDPVNFQKFPYTTEDEAWKTYLENPLTAATKAMMRVNGDDDSVAALSFLYDYYMGPKEKRILSSSTGGRNDQGKRYYHGMECEMDLTPLESPTHLMKFLTENVSGTPEYPDVLKKSSLMSLEGAAPAAGKAALLPPGPSKLEAGSVDSYLLPTSDVYDNGSLSSLFESIHGVPPTQRWQPDSTFKDDPQESLLFPDILKTSQEPPCPEDYPSPKSDFEYTLGSPKAIHIKSGESPMAYLNKGQFYPVTLRTPAGGKGLALSSNKVKSVVMVVFDNEKVPLEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVQHIEEVAYNALSFVWNVNEEAKVFIGVNCLSTDFSSQKGVKGVPLNLQIDTYDCGSGTERLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKIKCPDSSNSGIKGSLLSGFRGNETTYLRPEADLETPPVLFIPNVHFSGLQRSGGAVLSAGHSSSNRLPLKRTCSPFTEEFEPLPSKQAKEDDLQRVLLYVRRETEEVFDALMLKTPDLKGLRNAISEKYGFPEENIHKVYKKCKRGILVNMDNNIIQHYSNHVAFLLDMGELDGKIQIILKEL", "length": 607, "header": "tr|A0A5G2RGM9-1|A0A287B8R5_PIG Computationally mapped isoform of Grainyhead like transcription factor 3 OS=Sus scrofa OX=9823 GN=GRHL3 PE=4 SV=1 CANONICAL=A0A287B8R5-1" }, "locus": { "chromosome": "6", "start_pos": 82049448, "end_pos": 82017887, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000073197.2", "url": "https://www.ensembl.org/id/ENSSSCT00000073197.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074183.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074183.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VWD6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VWD6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100521975", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521975", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A1D5PGS7-1", "protein_name": "Grainyhead like transcription factor 3", "gene_name": "GRHL3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MERPGESARREEEGQYFGALLLSTHSPMSLSSDSFRSVRLMKNDTMNFQKFSYTNEDEAWKTYLENPLTAATKAMMRVNGDDDSVAALSLLYDYYMVPKEKRILPSGMMGRNELGKRQYHGMEYDSDITSFDGSAHLMKLLSENTSMTQEYCEPQKKNGLSLEGIPTPHKPAMLPPGTSKLDATPDTYMVPPGDLYDNSALNSLFETNPVATPQQRWQPDSTFKEDPQESLLFSDILKPQPEPPCSESYPTDGVKSDFEYTLGSPKAIHIKSGDSPMAYLNKGQFYPITLRAAGDSKCLHLSSNKVKSVVMIVFDNEKIPTEQLKFWKHWHSRQPTAKQRVIDVADCKENFNTVQNIEELAYNALSFVWNIHEEAKVFIGVNCLSTDFSSQKGVKGVPLNLQIDTYDYGNGTNHLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKGKCLDSNNNGLKGCLLSGFRGNEITFLRPETDLETQPVLFIPNLHFSNQQRCGTALPPAVPNSANRLPLKRSGTSFTDEFDPVPPKQTKEEDPQRVLLYVRRESEEVFDALMLKTPDLQGLRMAISEKYGLPEESIYKVYKKCKRGILVNMDNNIIQHYSNHMAFLLDMVEAEDKIQVILKEL", "length": 629 }, "evidence": [ { "id": "A0A287B8R5", "url": "https://omabrowser.org/oma/group/A0A287B8R5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8I5ZM46-1", "protein_name": "Grainyhead-like transcription factor 3", "gene_name": "Grhl3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSNELDFRSVRLLKNDPVSFQKFPYNNEDEAWKTYLENPLTAATKAIMRVNGDDESVAALSFLYDYYMGPKEKRILSSSTGGRNDQGKKYYHSMDYEPDLAPLESPTHLMKFLTENVSGSPDYTDQLKKNNLLGLEGALPTPGKTSTLPPGPSKLEAGSMDSYLLPTSDMYDNSSLNSLFESIHGVPPTQRWQPDSTFKDDPQESLLFPDILKTSPEAPCPEDYPSLKSDFEYTLGSPKAIHIKAGESPMAYLNKGQFYPVTLRTPAGGKGLSLSSSKVKSVVMIVFDNDKVPVEQLRFWRHWHSRQPTAKQRVIDVADCKENFNTVQHIEEVAYNALSFVWNVNEEAKVFIGVNCLSTDFSSQKGVKGVPLNLQIDTYDCGAGTERLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKVKCPDSSNNAGIKGCLLSGFRGNETTYLRPEADLETQPVLFIPNLHFSSLQRPGGVVPSAGHSSSDRLPLKRTCSPFAEEFEPLPSKQAKEDDLQRVLLYVRRETEEVFDALMLKTPDLKGLRNAISEKYGFPEENICKVYKKCKRGILVNMDNNIIQHYSNHVAFLLDMGELDGKIQIILKEL", "length": 603 }, "evidence": [ { "id": "A0A287B8R5", "url": "https://omabrowser.org/oma/group/A0A287B8R5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1N451-1", "protein_name": "Grainyhead like transcription factor 3", "gene_name": "GRHL3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSNELDFRSVRLLKNDPVNFQKFPYTNEDEAWKTYLENPLTAATKAMMRVNGDDDSVAALSFLYDYYMGPKEKRLLSSSTGGRNDQGKRYYHGMEYEMDLTPLESPTHLMKFLTENVSGTPEYPDVLKKNNLMSVEGAAPTPGKAALLPAGPSKLETGSVDSYLLPTSDVYDNGSLSSLFESIHGVPPTQRWQPDSTFKDDPQESLLFPDILKTSPEPPGPEDYPNPKSDFEYTLGSPKAIHIKSGESPMAYLNKGQFYPVTLRTPAGGKGLALSSNKVKSVVMVVFDNEKGPVEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVQHIEEVAYNALSFVWNVHEEAKVFVGVNCLSTDFSSQKGVKGVPLNLQIDTYDCGSGTERLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKVKCPDSSNSGIKGSLLAGFRGNETTYLRPEADLETPPVLFIPNVHFSSLQRPGGAVLSAGHGSSNRLALKRTCSPFTEEFEPLPSKQAKEDDLQRVLLYVRRETEEVFDALMLKTPDLKGLRSAISEKYGFPEENIYKVYKKCKRGILVNMDNNIIRHYSNHVAFLLDMGELDGKIQIILKEL", "length": 602 }, "evidence": [ { "id": "A0A287B8R5", "url": "https://omabrowser.org/oma/group/A0A287B8R5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5FWH3-1", "protein_name": "Grainyhead-like protein 3 homolog", "gene_name": "Grhl3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNELDFRSVRLLKNDPVSFQKFPYSNEDEAWKTYLENPLTAATKAMMRVNGDEESVAALSFLYDYYMGPKEKRILSSSTGGRNDQGKKFYHSMDYEPDLAPLESPTHLMKFLTENVSGSPDYTDQLKKNNLLGLEGVLPTPGKTNTVPPGPSKLEASSMDSYLLPASDIYDNGSLNSLFESIHGVPPTQRWQPDSTFKDDPQESLLFPDILKTSPDPPCPEDYPGLKSDFEYTLGSPKAIHIKAGESPMAYLNKGQFYPVTLRTPAGGKGLALSSSKVKSVVMVVFDNDKVPVEQLRFWRHWHSRQPTAKQRVIDVADCKENFNTVQHIEEVAYNALSFVWNVNEEAKVFIGVNCLSTDFSSQKGVKGVPLNLQIDTYDCGAGTERLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKVKCPDSSNNAGIKGCLLSGFRGNETTYLRPETDLETQPVLFIPNLHFSSLQRPGGVVPSAGHSSSDRLPLKRTCSPFAEEFEPLPSKQAKEDDLQRVLLYVRRETEEVFDALMLKTPDLKGLRNAISEKYGLPEENICKVYKKCKRGILVNMDNNIIQHYSNHVAFLLDMGELDGKIQIILKEL", "length": 603 }, "evidence": [ { "id": "A0A287B8R5", "url": "https://omabrowser.org/oma/group/A0A287B8R5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8TE85-1", "protein_name": "Grainyhead-like protein 3 homolog", "gene_name": "GRHL3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSNELDFRSVRLLKNDPVNLQKFSYTSEDEAWKTYLENPLTAATKAMMRVNGDDDSVAALSFLYDYYMGPKEKRILSSSTGGRNDQGKRYYHGMEYETDLTPLESPTHLMKFLTENVSGTPEYPDLLKKNNLMSLEGALPTPGKAAPLPAGPSKLEAGSVDSYLLPTTDMYDNGSLNSLFESIHGVPPTQRWQPDSTFKDDPQESMLFPDILKTSPEPPCPEDYPSLKSDFEYTLGSPKAIHIKSGESPMAYLNKGQFYPVTLRTPAGGKGLALSSNKVKSVVMVVFDNEKVPVEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVEHIEEVAYNALSFVWNVNEEAKVFIGVNCLSTDFSSQKGVKGVPLNLQIDTYDCGLGTERLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKVKCPDSSNSGVKGCLLSGFRGNETTYLRPETDLETPPVLFIPNVHFSSLQRSGGAAPSAGPSSSNRLPLKRTCSPFTEEFEPLPSKQAKEGDLQRVLLYVRRETEEVFDALMLKTPDLKGLRNAISEKYGFPEENIYKVYKKCKRGETSLLHPRLSRHPPPDCLECSHPVTQVRNMGFGDGFWRQRDLDSNPSPTTVNSLHFTVNSE", "length": 626 }, "evidence": [ { "id": "A0A287B8R5", "url": "https://omabrowser.org/oma/group/A0A287B8R5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A287B8R5", "url": "https://www.uniprot.org/uniprotkb/A0A287B8R5" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A287B8R5", "url": "https://www.uniprot.org/uniprotkb/A0A287B8R5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A287B8R5", "url": "https://www.uniprot.org/uniprotkb/A0A287B8R5" } ], "pmid": "" }, { "name": "establishment of skin barrier", "id": "GO:0061436", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061436", "evidence": [ { "database": "UniProtKB", "id": "A0A287B8R5", "url": "https://www.uniprot.org/uniprotkb/A0A287B8R5" } ], "pmid": "" }, { "name": "neural tube closure", "id": "GO:0001843", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001843", "evidence": [ { "database": "UniProtKB", "id": "A0A287B8R5", "url": "https://www.uniprot.org/uniprotkb/A0A287B8R5" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A287B8R5", "url": "https://www.uniprot.org/uniprotkb/A0A287B8R5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "A0A287B8R5", "url": "https://www.uniprot.org/uniprotkb/A0A287B8R5" } ], "pmid": "" }, { "name": "chromatin DNA binding", "id": "GO:0031490", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031490", "evidence": [ { "database": "UniProtKB", "id": "A0A287B8R5", "url": "https://www.uniprot.org/uniprotkb/A0A287B8R5" } ], "pmid": "" }, { "name": "DNA-binding transcription activator activity, RNA polymerase II-specific", "id": "GO:0001228", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001228", "evidence": [ { "database": "UniProtKB", "id": "A0A287B8R5", "url": "https://www.uniprot.org/uniprotkb/A0A287B8R5" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A287B8R5", "url": "https://www.uniprot.org/uniprotkb/A0A287B8R5" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "A0A287B8R5", "url": "https://www.uniprot.org/uniprotkb/A0A287B8R5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 116, "end_pos": 118, "annotation": "n_glycosylation_sequon" }, { "start_pos": 173, "end_pos": 175, "annotation": "n_glycosylation_sequon" }, { "start_pos": 441, "end_pos": 443, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287B8R5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B8R5" }, { "id": "PS51968", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51968" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Grh/CP2 DB", "eco_id": "ECO_0000259", "start_pos": 227, "end_pos": 460, "start_aa": "Pro", "end_aa": "Ile", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 116, "end_pos": 118 }, { "start_pos": 173, "end_pos": 175 }, { "start_pos": 441, "end_pos": 443 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B644-1", "uniprot_ac": "A0A287B644", "uniprot_id": "A0A287B644_PIG", "mass": { "chemical_mass": 83182.0, "monoisotopic_mass": 83182.0 }, "refseq": { "ac": "XP_020957875", "name": "polymeric immunoglobulin receptor isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020957875" }, "gene_names": [ { "name": "PIGR", "type": "recommended", "evidence": [ { "id": "A0A287B644", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B644" } ] }, { "name": "PIGR", "type": "synonym", "evidence": [ { "id": "XP_020957875", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020957875" } ] } ], "protein_names": [ { "name": "Polymeric immunoglobulin receptor", "type": "recommended", "evidence": [ { "id": "A0A287B644", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B644/entry#names_and_taxonomy" } ] }, { "name": "polymeric immunoglobulin receptor isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020957875", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020957875" } ] } ], "function": [ { "annotation": "Mediates selective transcytosis of polymeric IgA and IgM across mucosal epithelial cells. Binds polymeric IgA and IgM at the basolateral surface of epithelial cells. The complex is then transported across the cell to be secreted at the apical surface. During this process, a cleavage occurs that separates the extracellular (known as the secretory component) from the transmembrane segment.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2RA19", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RA19#function" }, { "database": "UniProtKB", "id": "ARBA00049599", "url": "https://www.uniprot.org/uniprotkb/ARBA00049599#function" }, { "database": "UniProtKB", "id": "A0A287ADL4", "url": "https://www.uniprot.org/uniprotkb/A0A287ADL4#function" }, { "database": "UniProtKB", "id": "A0A287A0N2", "url": "https://www.uniprot.org/uniprotkb/A0A287A0N2#function" }, { "database": "UniProtKB", "id": "F1SEZ3", "url": "https://www.uniprot.org/uniprotkb/F1SEZ3#function" }, { "database": "UniProtKB", "id": "A0A287B644", "url": "https://www.uniprot.org/uniprotkb/A0A287B644#function" } ] }, { "annotation": "Through its N-linked glycans ensures anchoring of secretory IgA (sIgA) molecules to mucus lining the epithelial surface to neutralize extracellular pathogens. On its own (free form) may act as a non-specific microbial scavenger to prevent pathogen interaction with epithelial cells.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2RA19", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RA19#function" }, { "database": "UniProtKB", "id": "ARBA00049604", "url": "https://www.uniprot.org/uniprotkb/ARBA00049604#function" }, { "database": "UniProtKB", "id": "A0A287ADL4", "url": "https://www.uniprot.org/uniprotkb/A0A287ADL4#function" }, { "database": "UniProtKB", "id": "A0A287A0N2", "url": "https://www.uniprot.org/uniprotkb/A0A287A0N2#function" }, { "database": "UniProtKB", "id": "F1SEZ3", "url": "https://www.uniprot.org/uniprotkb/F1SEZ3#function" }, { "database": "UniProtKB", "id": "A0A287B644", "url": "https://www.uniprot.org/uniprotkb/A0A287B644#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B644", "url": "https://www.uniprot.org/uniprotkb/A0A287B644" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PIGR", "url": "https://www.uniprot.org/uniprotkb/A0A287B644", "locus": { "chromosome": "9", "start_pos": 67553099, "end_pos": 67574668, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015657", "url": "https://www.ensembl.org/id/ENSSSCG00000015657" } ] } } ], "crossref": [ { "id": "A0A287B644", "url": "https://alphafold.ebi.ac.uk/entry/A0A287B644", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000015657", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015657", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd05716", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd05716", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "397315", "url": "https://www.ncbi.nlm.nih.gov/gene/397315", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003599", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003599", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013106", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013106", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050671", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050671", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "A0A287B644", "url": "https://www.orthodb.org/?gene=A0A287B644", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11860", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11860", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11860:SF82", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11860:SF82", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07686", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07686", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6798695", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798695", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020957875", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020957875", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287A0N2", "url": "https://www.uniprot.org/uniprotkb/A0A287A0N2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A0N2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A0N2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ADL4", "url": "https://www.uniprot.org/uniprotkb/A0A287ADL4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ADL4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ADL4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B644", "url": "https://www.uniprot.org/uniprotkb/A0A287B644", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B644-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B644-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RA19", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RA19", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RA19-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RA19-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SEZ3", "url": "https://www.uniprot.org/uniprotkb/F1SEZ3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SEZ3-1", "url": "https://www.uniprot.org/uniprotkb/F1SEZ3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTRFFYACLLAIFPVVSMKSPIFGPQDVSSVEGSSVSIRCYYPATSVNRHSRKYWCRIGAKGRCTTLISSEGYISKDYKGRANLTNFPENGTFVMDIGHLTRGDSGLYKCGLGISSRGLSFDVSLEVSQGPGQIGDVHVYTADLGSTVTINCPFKSENAQKPKSVYKKLGQIRVLVIDSNGYLNNNFTNRAHLSIQGTNQLVFSFVINRIQLRDAGIYICQAGDEESSADLQVLKPEPELIYGDLRGSVTFDCALGQEMANVAKFLCQLKNGKTCNVVINTLGKKAQDFEGRILLTPKENSHFSVHITGLRKEDAGHYLCGAHPDGEPKEGWPVQAWQLFINEDTMIPPRSSVVRGVVGGSVAVTCPYNPKETNSLKYWCRWEENENGRCPQLVESSGLVNEQYEGRLALYEEPGNGTFTVILNQLTNRDAGFYWCLTNEDSRWRSTVELKIVEGEPNLKLPENVTAWVGETLKLSCHFPCKFYSYQKYWCKWSNTGCRALPSQDEGQSQAFVNCDKKSQIISLNLNPVRKEDEGWYWCGVKDGLHYGETGAVYVAVEQKAKGSGDARLANAAPAPAEDAIEPRARETENEVLLDPSLIAEDRAVKDGEGPASGSGVPAAPGSSVGQGGGSKAVVSTLVPLALVMLVGAVTIGVLRARHRKNVDRISIRSYRTDISMSDFENSRDFGAHDNAGATLDTQETSLGGKDRFTTTTENTMEDKEPKRAKRSSKEEADKAFTTFLLQANSIIAATQNGPREA", "length": 758, "header": "tr|A0A287B644-1|A0A287B644_PIG Isoform 1 of Polymeric immunoglobulin receptor OS=Sus scrofa OX=9823 GN=PIGR PE=1 SV=1 CANONICAL=A0A287B644-1" }, "isoforms": [ { "isoform_ac": "A0A287A0N2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A0N2/entry", "sequence": { "sequence": "MGDRALGTRNRDGIPSLFLFFFFFFFLVSMKSPIFGPQDVSSVEGSSVSIRCYYPATSVNRHSRKYWCRIGAKGRCTTLISSEGYISKDYKGRANLTNFPENGTFVMDIGHLTRGDSGLYKCGLGISSRGLSFDVSLEVSQGPGQIGDVHVYTADLGSTVTINCPFKSENAQKPKSVYKKLGQIRVLVIDSNGYLNNNFTNRAHLSIQGTNQLVFSFVINRIQLRDAGIYICQAGDEESSADLQVLKPEPELIYGDLRGSVTFDCALGQEMANVAKFLCQLKNGKTCNVVINTLGKKAQDFEGRILLTPKENSHFSVHITGLRKEDAGHYLCGAHPDGEPKEGWPVQAWQLFINEDTMIPPRSSVVRGVVGGSVAVTCPYNPKETNSLKYWCRWEENENGRCPQLVESSGLVNEQYEGRLALYEEPGNGTFTVILNQLTNRDAGFYWCLTNEDSRWRSTVELKIVEGEPNLKLPENVTAWVGETLKLSCHFPCKFYSYQKYWCKWSNTGCRALPSQDEGQSQAFVNCDKKSQIISLNLNPVRKEDEGWYWCGVKDGLHYGETGAVYVAVEQKAKGSGDARLANAAPAPAEDAIEPRARETENEVLLDPSLIAEDRAVKDGEGPASGSGVPAAPGSSVGQGGGSKAVVSTLVPLALVMLVGAVTIGVLRARHRKNVDRISIRSYRTDISMSDFENSRDFGAHDNAGATLDTQETSLGGKDSIVSPDSGPDSPLVGLEDICSWGAMPAPGGPFRPHLAVSHYSSKEEADKAFTTFLLQANSIIAATQNGPREA", "length": 791, "header": "tr|A0A287A0N2-1|A0A287B644_PIG Computationally mapped isoform of Polymeric immunoglobulin receptor OS=Sus scrofa OX=9823 GN=PIGR PE=1 SV=3 CANONICAL=A0A287B644-1" }, "locus": { "chromosome": "9", "start_pos": 67564840, "end_pos": 67554596, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065276.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065276.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037479.3", "url": "https://www.ensembl.org/id/ENSSSCP00000037479.3" } ] } }, { "isoform_ac": "A0A287ADL4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ADL4/entry", "sequence": { "sequence": "MTRFFYACLLAIFPVVSMKSPIFGPQDVSSVEGSSVSIRCYYPATSVNRHSRKYWCRIGAKGRCTTLISSEGYISKDYKGRANLTNFPENGTFVMDIGHLTRGDSGLYKCGLGISSRGLSFDVSLEVSQGPGQIGDVHVYTADLGSTVTINCPFKSENAQKPKSVYKKLGQIRVLVIDSNGYLNNNFTNRAHLSIQGTNQLVFSFVINRIQLRDAGIYICQAGDEESSADLQVLKPEPELIYGDLRGSVTFDCALGQEMANVAKFLCQLKNGKTCNVVINTLGKKAQDFEGRILLTPKENSHFSVHITGLRKEDAGHYLCGAHPDGEPKEGWPVQAWQLFINEDTMIPPRSSVVRGVVGGSVAVTCPYNPKETNSLKYWCRWEENENGRCPQLVESSGLVNEQYEGRLALYEEPGNGTFTVILNQLTNRDAGFYWCLTNEDSRWRSTVELKIVEGEPNLKLPENVTAWVGETLKLSCHFPCKFYSYQKYWCKWSNTGCRALPSQDEGQSQAFVNCDKKSQIISLNLNPVRKEDEGWYWCGVKDGLHYGETGAVYVAVEQKAKGSGDARLANAAPAPAEDAIEPRARETENEVLLDPSLIAEDRAVKDGEGPASGSGVPAAPGSSVGQGGGSKAVVSTLVPLALVMLVGAVTIGVLRARHRKNVDRISIRSYRTDISMSDFENSRDFGAHDNAGATLDTQETSLGGKDRFTTTTENTMEDKEPKRAKRGPDSPLVGLEDICSWGAMPAPGGPFRPHLAVSHYSSKEEADKAFTTFLLQANSIIAATQNGPREA", "length": 792, "header": "tr|A0A287ADL4-1|A0A287B644_PIG Computationally mapped isoform of Polymeric immunoglobulin receptor OS=Sus scrofa OX=9823 GN=PIGR PE=1 SV=1 CANONICAL=A0A287B644-1" }, "locus": { "chromosome": "9", "start_pos": 67565029, "end_pos": 67554596, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056679.3", "url": "https://www.ensembl.org/id/ENSSSCT00000056679.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041896.1", "url": "https://www.ensembl.org/id/ENSSSCP00000041896.1" } ] } }, { "isoform_ac": "A0A287B644-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B644/entry", "sequence": { "sequence": "MTRFFYACLLAIFPVVSMKSPIFGPQDVSSVEGSSVSIRCYYPATSVNRHSRKYWCRIGAKGRCTTLISSEGYISKDYKGRANLTNFPENGTFVMDIGHLTRGDSGLYKCGLGISSRGLSFDVSLEVSQGPGQIGDVHVYTADLGSTVTINCPFKSENAQKPKSVYKKLGQIRVLVIDSNGYLNNNFTNRAHLSIQGTNQLVFSFVINRIQLRDAGIYICQAGDEESSADLQVLKPEPELIYGDLRGSVTFDCALGQEMANVAKFLCQLKNGKTCNVVINTLGKKAQDFEGRILLTPKENSHFSVHITGLRKEDAGHYLCGAHPDGEPKEGWPVQAWQLFINEDTMIPPRSSVVRGVVGGSVAVTCPYNPKETNSLKYWCRWEENENGRCPQLVESSGLVNEQYEGRLALYEEPGNGTFTVILNQLTNRDAGFYWCLTNEDSRWRSTVELKIVEGEPNLKLPENVTAWVGETLKLSCHFPCKFYSYQKYWCKWSNTGCRALPSQDEGQSQAFVNCDKKSQIISLNLNPVRKEDEGWYWCGVKDGLHYGETGAVYVAVEQKAKGSGDARLANAAPAPAEDAIEPRARETENEVLLDPSLIAEDRAVKDGEGPASGSGVPAAPGSSVGQGGGSKAVVSTLVPLALVMLVGAVTIGVLRARHRKNVDRISIRSYRTDISMSDFENSRDFGAHDNAGATLDTQETSLGGKDRFTTTTENTMEDKEPKRAKRSSKEEADKAFTTFLLQANSIIAATQNGPREA", "length": 758, "header": "tr|A0A287B644-1|A0A287B644_PIG Isoform 1 of Polymeric immunoglobulin receptor OS=Sus scrofa OX=9823 GN=PIGR PE=1 SV=1 CANONICAL=A0A287B644-1" }, "locus": { "chromosome": "9", "start_pos": 67565029, "end_pos": 67554596, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062912.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062912.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051558.1", "url": "https://www.ensembl.org/id/ENSSSCP00000051558.1" } ] } }, { "isoform_ac": "A0A5G2RA19-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RA19/entry", "sequence": { "sequence": "MTTSPIFGPQDVSSVEGSSVSIRCYYPATSVNRHSRKYWCRIGAKGRCTTLISSEGYISKDYKGRANLTNFPENGTFVMDIGHLTRGDSGLYKCGLGISSRGLSFDVSLEVSQGPGQIGDVHVYTADLGSTVTINCPFKSENAQKPKSVYKKLGQIRVLVIDSNGYLNNNFTNRAHLSIQGTNQLVFSFVINRIQLRDAGIYICQAGDEESSADLQVLKPEPELIYGDLRGSVTFDCALGQEMANVAKFLCQLKNGKTCNVVINTLGKKAQDFEGRILLTPKENSHFSVHITGLRKEDAGHYLCGAHPDGEPKEGWPVQAWQLFINEDTMIPPRSSVVRGVVGGSVAVTCPYNPKETNSLKYWCRWEENENGRCPQLVESSGLVNEQYEGRLALYEEPGNGTFTVILNQLTNRDAGFYWCLTNEDSRWRSTVELKIVEGEPNLKLPENVTAWVGETLKLSCHFPCKFYSYQKYWCKWSNTGCRALPSQDEGQSQAFVNCDKKSQIISLNLNPVRKEDEGWYWCGVKDGLHYGETGAVYVAVEQKAKGSGDARLANAAPAPAEDAIEPRARETENEVLLDPSLIAEDRAVKDGEGPASGSGVPAAPGSSVGQGGGSKAVVSTLVPLALVMLVGAVTIGVLRARHRKNVDRISIRSYRTDISMSDFENSRDFGAHDNAGATLDTQETSLGGKDTDKAFTTFLLQANSIIAATQNGPREA", "length": 717, "header": "tr|A0A5G2RA19-1|A0A287B644_PIG Computationally mapped isoform of Polymeric immunoglobulin receptor OS=Sus scrofa OX=9823 GN=PIGR PE=1 SV=1 CANONICAL=A0A287B644-1" }, "locus": { "chromosome": "9", "start_pos": 67563928, "end_pos": 67554596, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091173.1", "url": "https://www.ensembl.org/id/ENSSSCT00000091173.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067455.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067455.1" } ] } }, { "isoform_ac": "F1SEZ3-1", "url": "https://www.uniprot.org/uniprotkb/F1SEZ3/entry", "sequence": { "sequence": "MTRFFYACLLAIFPVVSMKSPIFGPQDVSSVEGSSVSIRCYYPATSVNRHSRKYWCRIGAKGRCTTLISSEGYISKDYKGRANLTNFPENGTFVMDIGHLTRGDSGLYKCGLGISSRGLSFDVSLEVSQGPGQIGDVHVYTADLGSTVTINCPFKSENAQKPKSVYKKLGQIRVLVIDSNGYLNNNFTNRAHLSIQGTNQLVFSFVINRIQLRDAGIYICQAGDEESSADLQVLKPEPELIYGDLRGSVTFDCALGQEMANVAKFLCQLKNGKTCNVVINTLGKKAQDFEGRILLTPKENSHFSVHITGLRKEDAGHYLCGAHPDGEPKEGWPVQAWQLFINEDTMIPPRSSVVRGVVGGSVAVTCPYNPKETNSLKYWCRWEENENGRCPQLVESSGLVNEQYEGRLALYEEPGNGTFTVILNQLTNRDAGFYWCLTNEDSRWRSTVELKIVEGEPNLKLPENVTAWVGETLKLSCHFPCKFYSYQKYWCKWSNTGCRALPSQDEGQSQAFVNCDKKSQIISLNLNPVRKEDEGWYWCGVKDGLHYGETGAVYVAVEQKAKGSGDARLANAAPAPAEDAIEPRARETENEVLLDPSLIAEDRAVKDGEGPASGSGVPAAPGSSVGQGGGSKAVVSTLVPLALVMLVGAVTIGVLRARHRKNVDRISIRSYRTDISMSDFENSRDFGAHDNAGATLDTQETSLGGKDTDKAFTTFLLQANSIIAATQNGPREA", "length": 733, "header": "tr|F1SEZ3-1|A0A287B644_PIG Computationally mapped isoform of Polymeric immunoglobulin receptor OS=Sus scrofa OX=9823 GN=PIGR PE=1 SV=5 CANONICAL=A0A287B644-1" }, "locus": { "chromosome": "9", "start_pos": 67565029, "end_pos": 67554596, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017048.6", "url": "https://www.ensembl.org/id/ENSSSCT00000017048.6" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016593.6", "url": "https://www.ensembl.org/id/ENSSSCP00000016593.6" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 651, "start_aa": "Thr", "end_pos": 651, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr651", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SEZ3", "url": "https://www.uniprot.org/uniprotkb/F1SEZ3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-6798695", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798695", "resource": "Reactome", "description": "Neutrophil degranulation" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A287B644", "url": "https://www.uniprot.org/uniprotkb/A0A287B644" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A287B644", "url": "https://www.uniprot.org/uniprotkb/A0A287B644" } ], "pmid": "" }, { "name": "receptor complex", "id": "GO:0043235", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043235", "evidence": [ { "database": "UniProtKB", "id": "A0A287B644", "url": "https://www.uniprot.org/uniprotkb/A0A287B644" } ], "pmid": "" }, { "name": "secretory IgA immunoglobulin complex", "id": "GO:0071751", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071751", "evidence": [ { "database": "UniProtKB", "id": "A0A287B644", "url": "https://www.uniprot.org/uniprotkb/A0A287B644" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "polymeric immunoglobulin receptor activity", "id": "GO:0001792", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001792", "evidence": [ { "database": "UniProtKB", "id": "A0A287B644", "url": "https://www.uniprot.org/uniprotkb/A0A287B644" } ], "pmid": "" }, { "name": "transmembrane signaling receptor activity", "id": "GO:0004888", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004888", "evidence": [ { "database": "UniProtKB", "id": "A0A287B644", "url": "https://www.uniprot.org/uniprotkb/A0A287B644" } ], "pmid": "" }, { "name": "polymeric immunoglobulin binding", "id": "GO:0001790", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001790", "evidence": [ { "database": "UniProtKB", "id": "A0A287B644", "url": "https://www.uniprot.org/uniprotkb/A0A287B644" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor", "id": "GO:0002415", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002415", "evidence": [ { "database": "UniProtKB", "id": "A0A287B644", "url": "https://www.uniprot.org/uniprotkb/A0A287B644" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "A0A287B644", "url": "https://www.uniprot.org/uniprotkb/A0A287B644" } ], "pmid": "" }, { "name": "epidermal growth factor receptor signaling pathway", "id": "GO:0007173", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007173", "evidence": [ { "database": "UniProtKB", "id": "A0A287B644", "url": "https://www.uniprot.org/uniprotkb/A0A287B644" } ], "pmid": "" }, { "name": "receptor clustering", "id": 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"url": "https://www.uniprot.org/uniprotkb/A0A8W4FI81", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FI81-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FI81-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "METAEKECGALGGLFQAIVNDMKSSYPIWEDFNSKATKLHSQLRTTVLAAVAFLDAFQKVADMATNTRGATRDIGSALTRMCMRHRSIETKLRQFTNALLESLINPLQERIEDWKKSANQLDKDHAKEYKRARHEIKKKSSDTLKLQKKARKAPPGKGDLQPQLDSALQDVNDMYLLLEETEKQAVRRALIEERGRFCTFITFLQPVVNGELTMLGEITHLQGIIDDLVVLTAEPHKLPPASEQVIKDLKGSDYSWSYQTPPSSPSSSSSRKSSMCSAPSSSSSAKGGGAPWPGGAQTYSPGSTCRYRSLAQPATATARLSSISSHDSGFISQDATYSKPPSPMPSDITSQKSSSSASSEASETCQSVSECSSPTSDWAKASPHEQPSGTTLQRRKDRVELLRDTEPGPASGGALGPSGEEAPRPRMSPATIAAKHGEEVSPAASDLAMVLTRGLSLEHQKSSRDSLQYSSGYSTQTTTPSCSEDTIPSQGSDYDCYSVNGDADTEGPPEFDKSSTIPRNSNIAQNYRRLIQTKRPASTAGLPTSGLPTASGAPPGVATIRRTPSTKPTVRRALSSAGPIPIRPPIVPVKTPTVPDSPSYLGPTRAGSEECVFYTDEAASPLAPDLAKASPKRLSLPNTAWGSPSTEAASYSGQGSGLAAEDEEQQQQLAANRHSLVEKLGELVAGAHALGEGQFPFPTALSAAPVEETPTPPPAATSDPPAEDMLVAIRRGVRLRRTVTNDRSAPRIL", "length": 749, "header": "tr|A0A287BCH7-1|A0A287BCH7_PIG Isoform 1 of MTSS I-BAR domain containing 2 OS=Sus scrofa OX=9823 GN=MTSS2 PE=1 SV=2 CANONICAL=A0A287BCH7-1" }, "isoforms": [ { "isoform_ac": "A0A287ACA2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ACA2/entry", "sequence": { "sequence": "MPCGPSWAVSGIMGPHVAQPTSPVSPLRSLRQDLPLTVHSPLREDVGRHCREARVPGREHYANVPVPRARPSSRPWLYPGSSVSPEGPGASLPAGAGLLSHKLPRVCLEAACGYSAQVEPCSLRGVSLPLSSRQSSYPIWEDFNSKATKLHSQLRTTVLAAVAFLDAFQKVADMATNTRGATRDIGSALTRMCMRHRSIETKLRQFTNALLESLINPLQERIEDWKKSANQLDKDHAKEYKRARHEIKKKSSDTLKLQKKARKAPPGKGDLQPQLDSALQDVNDMYLLLEETEKQAVRRALIEERGRFCTFITFLQPVVNGELTMLGEITHLQGIIDDLVVLTAEPHKLPPASEQVIKDLKGSDYSWSYQTPPSSPSSSSSRKSSMCSAPSSSSSAKGGGAPWPGGAQTYSPGSTCRYRSLAQPATATARLSSISSHDSGFISQDATYSKPPSPMPSDITSQKSSSSASSEASETCQSVSECSSPTSDWAKASPHEQPSGTTLQRRKDRVELLRDTEPGPASGGALGPSGEEAPRPRMSPATIAAKHGEEVSPAASDLAMVLTRGLSLEHQKSSRDSLQYSSGYSTQTTTPSCSEDTIPSQGSDYDCYSVNGDADTEGPPEFDKSSTIPRNSNIAQNYRRLIQTKRPASTAGLPTSGLPTASGAPPGVATIRRTPSTKPTVRRALSSAGPIPIRPPIVPVKTPTVPDSPSYLGPTRAGSEECVFYTDEAASPLAPDLAKASPKRLSLPNTAWGSPSTEAASYSGQGSGLAAEDEEQQQQLAANRHSLVEKLGELVAGAHALGEGQFPFPTALSAAPVEETPTPPPAATSDPPAEDMLVAIRRGVRLRRTVTNDRSAPRIL", "length": 860, "header": "tr|A0A287ACA2-1|A0A287BCH7_PIG Computationally mapped isoform of MTSS I-BAR domain containing 2 OS=Sus scrofa OX=9823 GN=MTSS2 PE=1 SV=2 CANONICAL=A0A287BCH7-1" }, "locus": { "chromosome": "6", "start_pos": 13677708, "end_pos": 13662892, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038755.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038755.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041593.2", "url": "https://www.ensembl.org/id/ENSSSCP00000041593.2" } ] } }, { "isoform_ac": "A0A287AQA4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AQA4/entry", "sequence": { "sequence": "METAEKECGALGGLFQAIVNDMKSSYPIWEDFNSKATKLHSQLRTTVLAAVAFLDAFQKVADMATNTRGATRDIGSALTRMCMRHRSIETKLRQFTNALLESLINPLQERIEDWKKSANQLDKDHAKEYKRARHEIKKKSSDTLKLQKKARKELLGKGDLQPQLDSALQDVNDMYLLLEETEKQAVRRALIEERGRFCTFITFLQPVVNGELTMLGEITHLQGIIDDLVVLTAEPHKLPPASEQVIKDLKGSDYSWSYQTPPSSPSSSSSRKSSMCSAPSSSSSAKGGGAPWPGGAQTYSPGSTCRYRSLAQPATATARLSSISSHDSGFISQDATYSKPPSPMPSDITSQKSSSSASSEASETCQSVSECSSPTSDWAKASPHEQPSGTTLQRRKDRVELLRDTEPGPASGGALGPSGEEAPRPRMSPATIAAKHGEEVSPAASDLAMVLTRGLSLEHQKSSRDSLQYSSGYSTQTTTPSCSEDTIPSQGSDYDCYSVNGDADTEGPPEFDKSSTIPRNSNIAQNYRRLIQTKRPASTAGLPTSGLPTASGAPPGVATIRRTPSTKPTVRRALSSAGPIPIRPPIVPVKTPTVPDSPSYLGPTRAGSEECVFYTDEAASPLAPDLAKASPKRLSLPNTAWGSPSTEAASYSGAEDEEQQQQLAANRHSLVEKLGELVAGAHALGEGQFPFPTALSAAPVEETPTPPPAATSDPPAEDMLVAIRRGVRLRRTVTNDRSAPRIL", "length": 743, "header": "tr|A0A287AQA4-1|A0A287BCH7_PIG Computationally mapped isoform of MTSS I-BAR domain containing 2 OS=Sus scrofa OX=9823 GN=MTSS2 PE=1 SV=2 CANONICAL=A0A287BCH7-1" }, "locus": { "chromosome": "6", "start_pos": 13682204, "end_pos": 13662892, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058271.3", "url": "https://www.ensembl.org/id/ENSSSCT00000058271.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046244.2", "url": "https://www.ensembl.org/id/ENSSSCP00000046244.2" } ] } }, { "isoform_ac": "A0A287BCH7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCH7/entry", "sequence": { "sequence": "METAEKECGALGGLFQAIVNDMKSSYPIWEDFNSKATKLHSQLRTTVLAAVAFLDAFQKVADMATNTRGATRDIGSALTRMCMRHRSIETKLRQFTNALLESLINPLQERIEDWKKSANQLDKDHAKEYKRARHEIKKKSSDTLKLQKKARKAPPGKGDLQPQLDSALQDVNDMYLLLEETEKQAVRRALIEERGRFCTFITFLQPVVNGELTMLGEITHLQGIIDDLVVLTAEPHKLPPASEQVIKDLKGSDYSWSYQTPPSSPSSSSSRKSSMCSAPSSSSSAKGGGAPWPGGAQTYSPGSTCRYRSLAQPATATARLSSISSHDSGFISQDATYSKPPSPMPSDITSQKSSSSASSEASETCQSVSECSSPTSDWAKASPHEQPSGTTLQRRKDRVELLRDTEPGPASGGALGPSGEEAPRPRMSPATIAAKHGEEVSPAASDLAMVLTRGLSLEHQKSSRDSLQYSSGYSTQTTTPSCSEDTIPSQGSDYDCYSVNGDADTEGPPEFDKSSTIPRNSNIAQNYRRLIQTKRPASTAGLPTSGLPTASGAPPGVATIRRTPSTKPTVRRALSSAGPIPIRPPIVPVKTPTVPDSPSYLGPTRAGSEECVFYTDEAASPLAPDLAKASPKRLSLPNTAWGSPSTEAASYSGQGSGLAAEDEEQQQQLAANRHSLVEKLGELVAGAHALGEGQFPFPTALSAAPVEETPTPPPAATSDPPAEDMLVAIRRGVRLRRTVTNDRSAPRIL", "length": 749, "header": "tr|A0A287BCH7-1|A0A287BCH7_PIG Isoform 1 of MTSS I-BAR domain containing 2 OS=Sus scrofa OX=9823 GN=MTSS2 PE=1 SV=2 CANONICAL=A0A287BCH7-1" }, "locus": { "chromosome": "6", "start_pos": 13682204, "end_pos": 13662892, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050052.3", "url": "https://www.ensembl.org/id/ENSSSCT00000050052.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054225.2", "url": "https://www.ensembl.org/id/ENSSSCP00000054225.2" } ] } }, { "isoform_ac": "A0A8W4FI81-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FI81/entry", "sequence": { "sequence": "METAEKECGALGGLFQAIVNDMKSSYPIWEDFNSKATKLHSQLRTTVLAAVAFLDAFQKVADMATNTRGATRDIGSALTRMCMRHRSIETKLRQFTNALLESLINPLQERIEDWKKSANQLDKDHAKEYKRARHEIKKKSSDTLKLQKKHAKVPGKGDLQPQLDSALQDVNDMYLLLEETEKQAVRRALIEERGRFCTFITFLQPVVNGELTMLGEITHLQGIIDDLVVLTAEPHKLPPASEQVIKDLKGSDYSWSYQTPPSSPSSSSSRKSSMCSAPSSSSSAKGGGAPWPGGAQTYSPGSTCRYRSLAQPATATARLSSISSHDSGFISQDATYSKPPSPMPSDITSQKSSSSASSEASETCQSVSECSSPTSDWAKASPHEQPSGTTLQRRKDRVELLRDTEPGPASGGALGPSGEEAPRPRMSPATIAAKHGEEVSPAASDLAMVLTRGLSLEHQKSSRDSLQYSSGYSTQTTTPSCSEDTIPSQGSDYDCYSVNGDADTEGPPEFDKSSTIPRNSNIAQNYRRLIQTKRPASTAGLPTSGLPTASGAPPGVATIRRTPSTKPTVRRALSSAGPIPIRPPIVPVKTPTVPDSPSYLGPTRAGSEECVFYTDEAASPLAPDLAKASPKRLSLPNTAWGSPSTEAASYSGAEDEEQQQQLAANRHSLVEKLGELVAGAHALGEGQFPFPTALSAAPVEETPTPPPAATSDPPAEDMLVAIRRGVRLRRTVTNDRSAPRIL", "length": 742, "header": "tr|A0A8W4FI81-1|A0A287BCH7_PIG Computationally mapped isoform of MTSS I-BAR domain containing 2 OS=Sus scrofa OX=9823 GN=MTSS2 PE=1 SV=1 CANONICAL=A0A287BCH7-1" }, "locus": { "chromosome": "6", "start_pos": 13682204, "end_pos": 13662892, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000094968.1", "url": "https://www.ensembl.org/id/ENSSSCT00000094968.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078593.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078593.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 711, "start_aa": "Thr", "end_pos": 711, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr711", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FI81", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FI81" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 6, "go_terms": [ { "name": "actin binding", "id": "GO:0003779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003779", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCH7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCH7" } ], "pmid": "" }, { "name": "actin monomer binding", "id": "GO:0003785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003785", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCH7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCH7" } ], "pmid": "" }, { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCH7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCH7" } ], "pmid": "" }, { "name": "phospholipid binding", "id": "GO:0005543", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005543", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCH7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCH7" } ], "pmid": "" }, { "name": "phosphatidylinositol-4,5-bisphosphate binding", "id": "GO:0005546", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005546", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCH7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCH7" } ], "pmid": "" }, { "name": "small GTPase binding", "id": "GO:0031267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031267", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCH7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCH7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "focal adhesion", "id": "GO:0005925", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005925", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCH7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCH7" } ], "pmid": "" }, { "name": "actin cytoskeleton", "id": "GO:0015629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015629", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCH7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCH7" } ], "pmid": "" }, { "name": "lamellipodium", "id": "GO:0030027", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030027", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCH7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCH7" } ], "pmid": "" }, { "name": "ruffle membrane", "id": "GO:0032587", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032587", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCH7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCH7" } ], "pmid": "" }, { "name": "cortical actin cytoskeleton", "id": "GO:0030864", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030864", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCH7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCH7" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCH7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCH7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "plasma membrane organization", "id": "GO:0007009", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007009", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCH7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCH7" } ], "pmid": "" }, { "name": "membrane organization", "id": "GO:0061024", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061024", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCH7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCH7" } ], "pmid": "" }, { "name": "cellular response to platelet-derived growth factor stimulus", "id": "GO:0036120", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036120", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCH7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCH7" } ], "pmid": "" }, { "name": "cell projection assembly", "id": "GO:0030031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030031", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCH7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCH7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287BCH7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 749, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287BCH7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287BCH7" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 711 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"https://www.ncbi.nlm.nih.gov/protein/XP_013850839" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BBP9", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZNF655", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP9", "locus": { "chromosome": "3", "start_pos": 6521844, "end_pos": 6504690, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000007617", "url": "https://www.ensembl.org/id/ENSSSCG00000007617" } ] } } ], "crossref": [ { "id": "A0A287BBP9", "url": "https://alphafold.ebi.ac.uk/entry/A0A287BBP9", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000007617", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000007617", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07765", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07765", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100519015", "url": "https://www.ncbi.nlm.nih.gov/gene/100519015", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001909", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001909", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036051", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036051", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050169", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050169", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050758", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050758", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050826", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050826", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100519015", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519015", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HQRIHHQ", "url": "https://omabrowser.org/oma/group/HQRIHHQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287AU88", "url": "https://www.orthodb.org/?gene=A0A287AU88", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23232", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23232", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23232:SF142", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23232:SF142", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23234", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23234", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23234:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23234:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24377", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24377", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01352", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01352", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013850839", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013850839", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AM52", "url": "https://www.uniprot.org/uniprotkb/A0A287AM52", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AM52-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AM52-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AU88", "url": "https://www.uniprot.org/uniprotkb/A0A287AU88", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AU88-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AU88-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AYF6", "url": "https://www.uniprot.org/uniprotkb/A0A287AYF6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AYF6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AYF6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B8H2", "url": "https://www.uniprot.org/uniprotkb/A0A287B8H2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B8H2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B8H2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BBP9", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BBP9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F9M0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9M0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F9M0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9M0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEELSAQETAGSPRVPFQPLEAYAEGLSPTPQFVQDTDMEQGLTGGFPLAKPDGISQLEQDLQVFDLETEHRDVLRDDCSDGETREESERLVPKQKMPEEVHSYRVRVGRLKKDIAQVPEARDVYKPEDRLERLQEILRKFLFLEREFRQITISKKTFTSEKNSDCHEPEKSFRVDSALDADQRGLRIQSVHDTDTCDPSLPRNSAGPREQVHLARDVQGGEYEESLLGLSHLGKCESLPPPEKSYKCDACEKTFHQSSALSRHQRIHTREKPYKCRECEKSFSQSSSLSRHKRIHSREKPYTCDASDKSCDTSETSCSQSSDLMQHKRGHARAKSYKCGGCERVFSRSVHLAQHQRVHRGVPCACAVCGGDFCHTSYLAEHQKVHCEENAYAYRECGLSFIKPQGLDPREKPHACNDCGEDFRLHSHLLQHPRLHAGEKPHECDACGKAFRQTARLTQPHAVHRKEPSHEGDDLGDRFRPGSDLVLQQEVLARDDAFDGDAWDGDLSQRTPLGHRQGIYAKEKPYERSERGELFGQVQASFNI", "length": 544, "header": "tr|A0A287BBP9-1|A0A287BBP9_PIG Isoform 1 of Zinc finger protein 655 OS=Sus scrofa OX=9823 GN=ZNF655 PE=4 SV=1 CANONICAL=A0A287BBP9-1" }, "isoforms": [ { "isoform_ac": "A0A287AM52-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AM52/entry", "sequence": { "sequence": "MEELSAQETAGSPRVPFQPLEAYAEGLSPTPQFVQDTDMEQGLTGAPPVPQVPALPHEGSPGDQAAALLTAMYQDFHLPSLMGSPSWSKIYRSLIWKLSIETS", "length": 103, "header": "tr|A0A287AM52-1|A0A287BBP9_PIG Computationally mapped isoform of Zinc finger protein 655 OS=Sus scrofa OX=9823 GN=ZNF655 PE=4 SV=2 CANONICAL=A0A287BBP9-1" }, "locus": { "chromosome": "3", "start_pos": 6516865, "end_pos": 6505837, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060534.3", "url": "https://www.ensembl.org/id/ENSSSCT00000060534.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045117.2", "url": "https://www.ensembl.org/id/ENSSSCP00000045117.2" } ] } }, { "isoform_ac": "A0A287AU88-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AU88/entry", "sequence": { "sequence": "MEELSAQETAGSPRVPFQPLEAYAEGLSPTPQFVQDTDMEQGLTGAPPVPQVPALPHEGSPGDQAAALLTAMYQEFVTFEDVAVHLTREEWGCLDPVQRDLYREVMLENYGNLVSLGFPLAKPDGISQLEQDLQVFDLETEHRDVLRDDCSDGETREESERLVPKQKMPEEVHSYRVRVGRLKKDIAQVPEARDVYKPEDRLERLQEILRKFLFLEREFRQITISKKTFTSEKNSDCHEPEKSFRVDSALDADQRGLRIQSVHDTDTCDPSLPRNSAGPREQVHLARDVQGGEYEESLLGLSHLGKCESLPPPEKSYKCDACEKTFHQSSALSRHQRIHTREKPYKCRECEKSFSQSSSLSRHKRIHSREKPYTCDASDKSCDTSETSCSQSSDLMQHKRGHARAKSYKCGGCERVFSRSVHLAQHQRVHRGVPCACAVCGGDFCHTSYLAEHQKVHCEENAYAYRECGLSFIKPQGLDPREKPHACNDCGEDFRLHSHLLQHPRLHAGEKPHECDACGKAFRQTARLTQPHAVHRKEPSHEGDDLGDRFRPGSDLVLQQEVLARDDAFDGDAWDGDLSQRTPLGHRQGIYAKEKPYERSERGELFGQVQASFNI", "length": 615, "header": "tr|A0A287AU88-1|A0A287BBP9_PIG Computationally mapped isoform of Zinc finger protein 655 OS=Sus scrofa OX=9823 GN=ZNF655 PE=4 SV=1 CANONICAL=A0A287BBP9-1" }, "locus": { "chromosome": "3", "start_pos": 6518780, "end_pos": 6505837, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053901.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053901.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047672.1", "url": "https://www.ensembl.org/id/ENSSSCP00000047672.1" } ] } }, { "isoform_ac": "A0A287AYF6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AYF6/entry", "sequence": { "sequence": "MEELSAQETAGSPRVPFQPLEAYAEGLSPTPQFVQDTDMEQGLTGDGETREESERLVPKQKMPEEVHSYRVRVGRLKKDIAQVPEARDVYKPEDRLERLQEILRKFLFLEREFRQITISKKTFTSEKNSDCHEPEKSFRVDSALDADQRGLRIQSVHDTDTCDPSLPRNSAGPREQVHLARDVQGGEYEESLLGLSHLGKCESLPPPEKSYKCDACEKTFHQSSALSRHQRIHTREKPYKCRECEKSFSQSSSLSRHKRIHSREKPYTCDASDKSCDTSETSCSQSSDLMQHKRGHARAKSYKCGGCERVFSRSVHLAQHQRVHRGVPCACAVCGGDFCHTSYLAEHQKVHCEENAYAYRECGLSFIKPQGLDPREKPHACNDCGEDFRLHSHLLQHPRLHAGEKPHECDACGKAFRQTARLTQPHAVHRKEPSHEGDDLGDRFRPGSDLVLQQEVLARDDAFDGDAWDGDLSQRTPLGHRQGIYAKEKPYERSERGELFGQVQASFNI", "length": 509, "header": "tr|A0A287AYF6-1|A0A287BBP9_PIG Computationally mapped isoform of Zinc finger protein 655 OS=Sus scrofa OX=9823 GN=ZNF655 PE=4 SV=1 CANONICAL=A0A287BBP9-1" }, "locus": { "chromosome": "3", "start_pos": 6518780, "end_pos": 6505837, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059968.3", "url": "https://www.ensembl.org/id/ENSSSCT00000059968.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049190.1", "url": "https://www.ensembl.org/id/ENSSSCP00000049190.1" } ] } }, { "isoform_ac": "A0A287B8H2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B8H2/entry", "sequence": { "sequence": "MEELSAQETAGSPRVPFQPLEAYAEGLSPTPQFVQDTDMEQGLTGAPPVPQVPALPHEGSPGDQAAALLTAMYQEFVTFEDVAVHLTREEWGCLDPVQRDLYREVMLENYGNLVSLGILLRLPTTRIHSVNSCPALSHTQASAFSGETLAVLSAGISKRWPKYRLPIDSARPCSETPCPRL", "length": 181, "header": "tr|A0A287B8H2-1|A0A287B8H2_PIG Computationally mapped isoform of Zinc finger protein 655 OS=Sus scrofa OX=9823 GN=ZNF655 PE=4 SV=1 CANONICAL=A0A287BBP9-1" }, "locus": { "chromosome": "3", "start_pos": 6509255, "end_pos": 6505837, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052164.2", "url": "https://www.ensembl.org/id/ENSSSCT00000052164.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052826.1", "url": "https://www.ensembl.org/id/ENSSSCP00000052826.1" } ] } }, { "isoform_ac": "A0A287BBP9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP9/entry", "sequence": { "sequence": "MEELSAQETAGSPRVPFQPLEAYAEGLSPTPQFVQDTDMEQGLTGGFPLAKPDGISQLEQDLQVFDLETEHRDVLRDDCSDGETREESERLVPKQKMPEEVHSYRVRVGRLKKDIAQVPEARDVYKPEDRLERLQEILRKFLFLEREFRQITISKKTFTSEKNSDCHEPEKSFRVDSALDADQRGLRIQSVHDTDTCDPSLPRNSAGPREQVHLARDVQGGEYEESLLGLSHLGKCESLPPPEKSYKCDACEKTFHQSSALSRHQRIHTREKPYKCRECEKSFSQSSSLSRHKRIHSREKPYTCDASDKSCDTSETSCSQSSDLMQHKRGHARAKSYKCGGCERVFSRSVHLAQHQRVHRGVPCACAVCGGDFCHTSYLAEHQKVHCEENAYAYRECGLSFIKPQGLDPREKPHACNDCGEDFRLHSHLLQHPRLHAGEKPHECDACGKAFRQTARLTQPHAVHRKEPSHEGDDLGDRFRPGSDLVLQQEVLARDDAFDGDAWDGDLSQRTPLGHRQGIYAKEKPYERSERGELFGQVQASFNI", "length": 544, "header": "tr|A0A287BBP9-1|A0A287BBP9_PIG Isoform 1 of Zinc finger protein 655 OS=Sus scrofa OX=9823 GN=ZNF655 PE=4 SV=1 CANONICAL=A0A287BBP9-1" }, "locus": { "chromosome": "3", "start_pos": 6518780, "end_pos": 6505837, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043266.2", "url": "https://www.ensembl.org/id/ENSSSCT00000043266.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053538.1", "url": "https://www.ensembl.org/id/ENSSSCP00000053538.1" } ] } }, { "isoform_ac": "A0A8W4F9M0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9M0/entry", "sequence": { "sequence": "MEELSAQETAGSPRVPFQPLEAYAEGLSPTPQFVQDTDMEQGLTGGILLRLPTTRIHSVNSCPALSHTQASAFSGETLAVLSAGISKRWPKYRLPIDSARPCSETPCPRL", "length": 110, "header": "tr|A0A8W4F9M0-1|A0A287BBP9_PIG Computationally mapped isoform of Zinc finger protein 655 OS=Sus scrofa OX=9823 GN=ZNF655 PE=4 SV=1 CANONICAL=A0A287BBP9-1" }, "locus": { "chromosome": "3", "start_pos": 6509255, "end_pos": 6505837, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000097080.1", "url": "https://www.ensembl.org/id/ENSSSCT00000097080.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074986.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074986.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 30, "start_aa": "Thr", "end_pos": 30, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr30", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4F9M0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9M0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100519015", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519015", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1LXW8-1", "protein_name": "Zinc finger protein 655", "gene_name": "ZNF655", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEEVSAQEAAESPVVQFQSLETHSEGLSPEPQFVQDTDMEQGLTGGFPIFKPDGISQLEQDLQVFDLETKNREVLRDDCSDGDTRDENKLLIPKQKIPEEVHSYKVRVGRFKKDIAQVPETREVYKPEDRLERLQEILRKFLFLEREFRQITISKKTFTSEKNNECNELEKSFSLDSTLDTDQRVLRIQNVDDIDKYDVSLNQNSAGKQEQINLTQDFHSNDYKDSLMELSHLSNCESIPTTEKSYKCDACEKIFHQSSALSRHQRIHTREKPYKCKECEKSFSQSSSLSRHKRIHTREKPYKCEASDKSCEASDKSCNQSSDILQHKRVHTRAKSYKCSSCERVFSRSVHLTQHQRVHREMPCKCTVCGSDFCHTSHQAEHQKVHDEEKSYEYNNCGLTFIKHQGIRPREKPYTCNECGKDFRLNSHLIQHQRIHTEKPHESSESGKAFSQTACLIQHHKVHRKEKSYECNDYEDNFSHSSDLVLQQEVLTREKAFDCDAWEKSLSQRAHLVHHQGIHTKEKPYECNEHGETFNQVQASFNI", "length": 543 }, "evidence": [ { "id": "A0A287BBP9", "url": "https://omabrowser.org/oma/group/A0A287BBP9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8I5ZQZ7-1", "protein_name": "Zinc finger protein 655", "gene_name": "Zfp655", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEEITSQEAAESPRVQFQSLESQSECLSPELRFLRDTEMEQGYTDAPPVPQVPALPHEGSPGDQAAALLTARYQEFVTFEDVAVHLTREEWGCLDPVQRELYREVMLENYGNVVSLGFPISKPDGISQREQDLQVFDLETQNREGVRNDCSDGETREENKLLIPKRKISEEVHSYKVRVGKFKQDIAQVPETREAYKSEDRLERLQEILRKFLFLEREFRQITISKKTFSNEKNTEPEKSFSLDSTLDTDQRVLRIQTIDDSKYDMNFNQNPAVGEQEPINLTENFQNTDYKESLMDLSHLNKWESMPTTDRSYKCDTCGKTFHQASALTRHQRIHTREKPYKCKECEKSFSQSSSLSRHKRIHTREKSYRCEASDKSCDASDKSCSQSSDVLQHKKVHAKAKSYKCGTCERVFSRSVHLTQHQRTHKDTACKCTVCGSDFCHTSYLVEHQRLHHQEKSYEYDECGLAYVKQQGIRFREKPYSCNECGKDFRLNSHLVQHQRIHTGEKLHECNERGKAFSQTSCLSQHHKMHRKEKSYEYNNYEESFSHNSDLTLQQEVPIRERVFDCDAWEENFSQRAHLIPHERAHTKEKPYECNELGETFSQVQASFNM", "length": 612 }, "evidence": [ { "id": "A0A287BBP9", "url": "https://omabrowser.org/oma/group/A0A287BBP9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8N720-1", "protein_name": "Zinc finger protein 655", "gene_name": "ZNF655", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTGDGETREENKLLIPKQKISEEVHSYKVRVGRLKHDITQVPETREVYKSEDRLERLQEILRKFLYLEREFRQITISKETFTSEKNNECHEPEKSFSLDSTIDADQRVLRIQNTDDNDKYDMSFNQNSASGKHEHLNLTEDFQSSECKESLMDLSHLNKWESIPNTEKSYKCDVCGKIFHQSSALTRHQRIHTREKPYKCKECEKSFSQSSSLSRHKRIHTREKPYKCEASDKSCEASDKSCSPSSGIIQHKKIHTRAKSYKCSSCERVFSRSVHLTQHQKIHKEMPCKCTVCGSDFCHTSYLLEHQRVHHEEKAYEYDEYGLAYIKQQGIHFREKPYTCSECGKDFRLNSHLIQHQRIHTGEKAHECNECGKAFSQTSCLIQHHKMHRKEKSYECNEYEGSFSHSSDLILQQEVLTRQKAFDCDVWEKNSSQRAHLVQHQSIHTKENS", "length": 491 }, "evidence": [ { "id": "A0A287BBP9", "url": "https://omabrowser.org/oma/group/A0A287BBP9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9CZP3-1", "protein_name": "Zinc finger protein 655", "gene_name": "Znf655", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEEVTSQEAAESPRGHFQPLENQSECLSPELRFLQDTDMEQGFSGGFPISKPDGISEREQDLQVFDLESKNREVIRGDCSDGETREENKLLIPKRKISEEVHSYKVRVGKFKQDIAQVPETREVYKSEDRLERLQEILRKFLFLEREFRQITISKKTFSSEKNTEPEKSFSLDSTLDTDQRVLRIQTTDDSKYDMNFNQNPAVGEQEPINLTENFQSTDYKESLMDLSHLNKWESMPTTDRSYKCDTCGKTFHQASALTRHQRIHTREKPYKCKECEKSFSQSSSLSRHKRIHTREKSYKCEASDKSCDAPDKSCSQSSDVLQHKKGHAKAKSYKCGTCERVFSRSVHLTQHQRTHKDMSCKCTVCGSDFCHTSYLVEHQRLHHQEKSYEYDECGLAYVKQQGIRFQEKPYSCNECGKDFRLNSHLIQHQRIHTGEKLHECNECGKSFSQTSCLIQHHKMHRKEKSYEYNNYEESFSHSSDLTLQQEVPIRERVFDCDAWEENFSQRAHLIQHERVHTKEKPYECSELGETFSQVQASFNM", "length": 541 }, "evidence": [ { "id": "A0A287BBP9", "url": "https://omabrowser.org/oma/group/A0A287BBP9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBP9", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP9" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBP9", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBP9", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP9" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBP9", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP9" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBP9", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP9" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBP9", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP9" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBP9", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBP9", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP9" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBP9", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP9" } ], "pmid": "" }, { "name": "negative regulation of G1/S transition of mitotic cell cycle", "id": "GO:2000134", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000134", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBP9", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287BBP9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 544, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287BBP9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287BBP9" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287BBP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP9" }, { "id": "PS50157", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50157" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2H2-type", "eco_id": "ECO_0000259", "start_pos": 246, "end_pos": 273, "start_aa": "Tyr", "end_aa": "Pro", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 30 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287BCC8-1", "uniprot_ac": "A0A287BCC8", "uniprot_id": "A0A287BCC8_PIG", "mass": { "chemical_mass": 182393.0, "monoisotopic_mass": 182393.0 }, "refseq": {}, "gene_names": [ { "name": "TASOR", "type": "recommended", "evidence": [ { "id": "A0A287BCC8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BCC8" } ] } ], "protein_names": [ { "name": "Transcription activation suppressor", "type": "synonym", "evidence": [ { "id": "A0A287BCC8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BCC8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BCC8", "url": "https://www.uniprot.org/uniprotkb/A0A287BCC8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TASOR", "url": "https://www.uniprot.org/uniprotkb/A0A287BCC8", "locus": { "chromosome": "13", "start_pos": 38492472, "end_pos": 38557193, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024201", "url": "https://www.ensembl.org/id/ENSSSCG00000024201" } ] } } ], "crossref": [ { "id": "ENSSSCG00000024201", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024201", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd22569", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22569", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100627450", "url": "https://www.ncbi.nlm.nih.gov/gene/100627450", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR022188", "url": "https://www.ebi.ac.uk/interpro/entry/IPR022188", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046432", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046432", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056242", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056242", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056243", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056243", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "A0A287B2V7", "url": "https://www.orthodb.org/?gene=A0A287B2V7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR16207", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16207", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16207:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16207:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12509", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12509", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23314", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23314", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24630", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24630", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-9843970", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9843970", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287B2V7", "url": "https://www.uniprot.org/uniprotkb/A0A287B2V7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B2V7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B2V7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BCC8", "url": "https://www.uniprot.org/uniprotkb/A0A287BCC8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BCC8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCC8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QH87", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QH87", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QH87-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QH87-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MATAAEAEASPPTDASWESGGGGGDDEMKQALPELESTPQNGGGVSIAEPGGGTGPEESAAAEAAPSLCHEQPQDSSEAGAAALPKGPEEPERPVRRSFQIPRKSREKKALFQLLTPGSREFEDVLNILHSSYLEPTSATNFNYKRACLIHNELLEKEFTEKRRELKFDGRLDKELSESYAFLMVDRYQVQSICEKGLQVGQSKITILGSPSMGVYLSRYADLLQANPLEAGAVGDVVIFKIMKGKIKSIYDPMGVKTLDSMLNKSALDPTPKHECHVSKNANRVTSLLAYRAYELTQYYFYEYSFDELRRRPRHVCPYAVVSFTYKDDIQTPKFIPSSRSNSFNADRNTEKFNYTLWKGQLLNKGKLLCYISLRSATRAFLPIKLPEKLDVETVMSIDHLKQKIPPALFYKETYLGPNEVLKNGMYCSLYEVVEKTRIGSNMESLLQKLEKEKLVLVKPLGDRGYLFLLSPCQMVPPYEHQTAKSRVLHALFLFQEPRGIVTSQKGSTNATPQERHENMPDVLKITQFLQFALIQYRKEFKNINTINFHSVVEKYVSEFFKRGFGSGKREFIMFPYTSRLDDKKFLYSAPKNKSHIDNCLHTYIFRPEMYQLPIYKLKELFEENRKLQQFSPLSDYDGQEEEVNGTKMKFGKRNNSRGETITPGKQKSSHSLDYDKDRVKELINLIQCRKKNVGGDSDTEDKRSRTVLKRKLEDLPENMRKLAKTSNLSENYHLYEESSQPVGSLGHDADLRRQQQDSSNSSIADIHRLFNWLSETLANARHSDASLTDTVNKALGLSSDDACEEMRPKHDYELNSTLDKKEYEQPTCAKIENAHFRDTKSPLLEIDTLSLKYPVAVSTSEVGTDHKVHLKDDPNLISMNNFEDCSLCPTVPIEHGFHRQSKSNNVEETEIHWKLIPITDTLKGTTEDDMLTGQVVTVEEQCVPAAEPPAVSETTERTVLGEYSLFSRKIEEILKQKNVSYVSSISTPIFSAQEKMKRLSEFIYSKTSRAGVQEFVDGLHEKLNTVIIKASAKGGNLPPVSPNDSGTKIALSPQGRHVIPVSSSDFSSKHLLEPLGSDPLKETNSNEQHSSSTSGLTEVEVNQPHHITEPMVTSDHTVPGDTAREPVEKETTKSPSDVNISTQPALSNFISQLEPEVFNSLVKIMKDVQKNTVKFYIHEEEESVLCKEIKEYLIKLGNTECHPEQFLERRSKLDKLLIIIQNEDIAGFIHKVPGLVTLKKLPCVSFAGVDSLDDVKNHTYNELFVSGGCIVSDESILNPEVITIENLKNFLTFLEELSTPEGKWQWKVHCKFQKKLKELGRLNAKALSLLTLLNVYQKKHLVEILSYHNCDSQTRNAPELDCLIRLQAQNIQQRHIVFLTEKSIKMLSSYTDNGIVVATVEDFMQNFKNLVGYHNSITEENLPLLGANENLESQSALLENDEKDEEDMSLDSGDEISQIEVCSNFHSEILAQETKGSSGTDQKKNIQIELQSSLDLQKCLLEDKTYQIDSEERASIDTVCSEGENSNSAEQDSYSNFQVYHSQLNMSHQFSHFNVLTHQTFLGTPYALLSNQSQESENYFLNAYTQSLDRDKPPSPLSWWKSDSSRPFSKEK", "length": 1613, "header": "tr|A0A287BCC8-1|A0A287BCC8_PIG Isoform 1 of Transcription activation suppressor OS=Sus scrofa OX=9823 GN=TASOR PE=3 SV=2 CANONICAL=A0A287BCC8-1" }, "isoforms": [ { "isoform_ac": "A0A287B2V7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B2V7/entry", "sequence": { "sequence": 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"length": 1674, "header": "tr|A0A287B2V7-1|A0A287BCC8_PIG Computationally mapped isoform of Transcription activation suppressor OS=Sus scrofa OX=9823 GN=TASOR PE=3 SV=3 CANONICAL=A0A287BCC8-1" }, "locus": { "chromosome": "13", "start_pos": 38556957, "end_pos": 38493700, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048219.3", "url": "https://www.ensembl.org/id/ENSSSCT00000048219.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050757.3", "url": "https://www.ensembl.org/id/ENSSSCP00000050757.3" } ] } }, { "isoform_ac": "A0A287BCC8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCC8/entry", "sequence": { "sequence": "MATAAEAEASPPTDASWESGGGGGDDEMKQALPELESTPQNGGGVSIAEPGGGTGPEESAAAEAAPSLCHEQPQDSSEAGAAALPKGPEEPERPVRRSFQIPRKSREKKALFQLLTPGSREFEDVLNILHSSYLEPTSATNFNYKRACLIHNELLEKEFTEKRRELKFDGRLDKELSESYAFLMVDRYQVQSICEKGLQVGQSKITILGSPSMGVYLSRYADLLQANPLEAGAVGDVVIFKIMKGKIKSIYDPMGVKTLDSMLNKSALDPTPKHECHVSKNANRVTSLLAYRAYELTQYYFYEYSFDELRRRPRHVCPYAVVSFTYKDDIQTPKFIPSSRSNSFNADRNTEKFNYTLWKGQLLNKGKLLCYISLRSATRAFLPIKLPEKLDVETVMSIDHLKQKIPPALFYKETYLGPNEVLKNGMYCSLYEVVEKTRIGSNMESLLQKLEKEKLVLVKPLGDRGYLFLLSPCQMVPPYEHQTAKSRVLHALFLFQEPRGIVTSQKGSTNATPQERHENMPDVLKITQFLQFALIQYRKEFKNINTINFHSVVEKYVSEFFKRGFGSGKREFIMFPYTSRLDDKKFLYSAPKNKSHIDNCLHTYIFRPEMYQLPIYKLKELFEENRKLQQFSPLSDYDGQEEEVNGTKMKFGKRNNSRGETITPGKQKSSHSLDYDKDRVKELINLIQCRKKNVGGDSDTEDKRSRTVLKRKLEDLPENMRKLAKTSNLSENYHLYEESSQPVGSLGHDADLRRQQQDSSNSSIADIHRLFNWLSETLANARHSDASLTDTVNKALGLSSDDACEEMRPKHDYELNSTLDKKEYEQPTCAKIENAHFRDTKSPLLEIDTLSLKYPVAVSTSEVGTDHKVHLKDDPNLISMNNFEDCSLCPTVPIEHGFHRQSKSNNVEETEIHWKLIPITDTLKGTTEDDMLTGQVVTVEEQCVPAAEPPAVSETTERTVLGEYSLFSRKIEEILKQKNVSYVSSISTPIFSAQEKMKRLSEFIYSKTSRAGVQEFVDGLHEKLNTVIIKASAKGGNLPPVSPNDSGTKIALSPQGRHVIPVSSSDFSSKHLLEPLGSDPLKETNSNEQHSSSTSGLTEVEVNQPHHITEPMVTSDHTVPGDTAREPVEKETTKSPSDVNISTQPALSNFISQLEPEVFNSLVKIMKDVQKNTVKFYIHEEEESVLCKEIKEYLIKLGNTECHPEQFLERRSKLDKLLIIIQNEDIAGFIHKVPGLVTLKKLPCVSFAGVDSLDDVKNHTYNELFVSGGCIVSDESILNPEVITIENLKNFLTFLEELSTPEGKWQWKVHCKFQKKLKELGRLNAKALSLLTLLNVYQKKHLVEILSYHNCDSQTRNAPELDCLIRLQAQNIQQRHIVFLTEKSIKMLSSYTDNGIVVATVEDFMQNFKNLVGYHNSITEENLPLLGANENLESQSALLENDEKDEEDMSLDSGDEISQIEVCSNFHSEILAQETKGSSGTDQKKNIQIELQSSLDLQKCLLEDKTYQIDSEERASIDTVCSEGENSNSAEQDSYSNFQVYHSQLNMSHQFSHFNVLTHQTFLGTPYALLSNQSQESENYFLNAYTQSLDRDKPPSPLSWWKSDSSRPFSKEK", "length": 1613, "header": "tr|A0A287BCC8-1|A0A287BCC8_PIG Isoform 1 of Transcription activation suppressor OS=Sus scrofa OX=9823 GN=TASOR PE=3 SV=2 CANONICAL=A0A287BCC8-1" }, "locus": { "chromosome": "13", "start_pos": 38556957, "end_pos": 38493700, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045728.3", "url": "https://www.ensembl.org/id/ENSSSCT00000045728.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054009.2", "url": "https://www.ensembl.org/id/ENSSSCP00000054009.2" } ] } }, { "isoform_ac": "A0A5G2QH87-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QH87/entry", "sequence": { "sequence": "MVPPYEHQTAKSRVLHALFLFQEPRGIVTSQKGSTNATPQERHENMPDVLKITQFLQFALIQYRKEFKNINTINFHSVVEKYVSEFFKRGFGSGKREFIMFPYTSRLDDKKFLYSAPKNKSHIDNCLHTYIFRPEMYQLPIYKLKELFEENRKLQQFSPLSDYDGQEEEVNGTKMKFGKRNNSRGETITPGKQKSSHSLDYDKDRVKELINLIQCRKKNVGGDSDTEDKRSRTVLKRKLEDLPENMRKLAKTSNLSENYHLYEESSQPVGSLGHDADLRRQQQDSSNSSIADIHRLFNWLSETLANARHSDASLTDTVNKALGLSSDDACEEMRPKHDYELNSTLDKKEYEQPTCAKIENAHFRDTKSPLLEIDTLSLKYPVAVSTSEVGTDHKVHLKDDPNLISMNNFEDCSLCPTVPIEHGFHRQSKSNNVEETEIHWKLIPITGGNARSPEDHLGKHGEKQTPGMKSPEEQLVCLPPQETFPNDPRVISRQRSSDYQFPSSPFTDTLKGTTEDDMLTGQVVTVEEQCVPAAEPPAVSETTERTVLGEYSLFSRKIEEILKQKNVSYVSSISTPIFSAQEKMKRLSEFIYSKTSRAGVQEFVDGLHEKLNTVIIKASAKGGNLPPVSPNDSGTKIALSPQGRHVIPVSSSDFSSKHLLEPLGSDPLKETNSNEQHSSSTSGLTEVEVNQPHHITEPMVTSDHTVPGDTAREPVEKETTKSPSDVNISTQPALSNFISQLEPEVFNSLVKIMKDVQKNTVKFYIHEEEESVLCKEIKEYLIKLGNTECHPEQFLERRSKLDKLLIIIQNEDIAGFIHKVPGLVTLKKLPCVSFAGVDSLDDVKNHTYNELFVSGGCIVSDESILNPEVITIENLKNFLTFLEELSTPEGKWQWKVHCKFQKKLKELGRLNAKALSLLTLLNVYQKKHLVEILSYHNCDSQTRNAPELDCLIRLQAQNIQQRHIVFLTEKSIKMLSSYTDNGIVVATVEDFMQNFKNLVGYHNSITEENLPLLGANENLESQSALLENDEKDEEDMSLDSGDEISQIEVCSNFHSEILAQETKGSSGTDQKKNIQIELQSSLDLQKCLLEDKTYQIDSEERASIDTVCSEGENSNSAEQDSYSNFQVYHSQLNMSHQFSHFNVLTHQTFLGTPYALLSNQSQESENYFLNAYTQSLDRDKPPSPLSWWKSDSSRPFSKEK", "length": 1200, "header": "tr|A0A5G2QH87-1|A0A287BCC8_PIG Computationally mapped isoform of Transcription activation suppressor OS=Sus scrofa OX=9823 GN=TASOR PE=3 SV=2 CANONICAL=A0A287BCC8-1" }, "locus": { "chromosome": "13", "start_pos": 38518407, "end_pos": 38493700, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077048.2", "url": "https://www.ensembl.org/id/ENSSSCT00000077048.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061373.2", "url": "https://www.ensembl.org/id/ENSSSCP00000061373.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QH87", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QH87" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-9843970", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9843970", "resource": "Reactome", "description": "Regulation of endogenous retroelements by the Human Silencing Hub (HUSH) complex" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "mesodermal to mesenchymal transition involved in gastrulation", "id": "GO:0060809", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060809", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCC8", "url": "https://www.uniprot.org/uniprotkb/A0A287BCC8" } ], "pmid": "" }, { "name": "negative regulation of gene expression, epigenetic", "id": "GO:0045814", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045814", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCC8", "url": "https://www.uniprot.org/uniprotkb/A0A287BCC8" } ], "pmid": "" }, { "name": "anterior/posterior axis specification, embryo", "id": "GO:0008595", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008595", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCC8", "url": "https://www.uniprot.org/uniprotkb/A0A287BCC8" } ], "pmid": "" }, { "name": "protein localization to heterochromatin", "id": "GO:0097355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097355", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCC8", "url": "https://www.uniprot.org/uniprotkb/A0A287BCC8" } ], "pmid": "" }, { "name": "transposable element silencing by heterochromatin formation", "id": "GO:0141005", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0141005", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCC8", "url": "https://www.uniprot.org/uniprotkb/A0A287BCC8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "chromatin binding", "id": "GO:0003682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003682", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCC8", "url": "https://www.uniprot.org/uniprotkb/A0A287BCC8" } ], "pmid": "" }, { "name": "protein-macromolecule adaptor activity", "id": "GO:0030674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030674", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCC8", "url": "https://www.uniprot.org/uniprotkb/A0A287BCC8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCC8", "url": "https://www.uniprot.org/uniprotkb/A0A287BCC8" } ], "pmid": "" }, { "name": "heterochromatin", "id": "GO:0000792", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000792", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCC8", "url": "https://www.uniprot.org/uniprotkb/A0A287BCC8" } ], "pmid": "" }, { "name": "HUSH complex", "id": "GO:0140283", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140283", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCC8", "url": "https://www.uniprot.org/uniprotkb/A0A287BCC8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1044, "end_pos": 1046, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1140, "end_pos": 1142, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1258, "end_pos": 1260, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1546, "end_pos": 1548, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1572, "end_pos": 1574, "annotation": "n_glycosylation_sequon" }, { "start_pos": 264, "end_pos": 266, "annotation": "n_glycosylation_sequon" }, { "start_pos": 354, "end_pos": 356, "annotation": "n_glycosylation_sequon" }, { "start_pos": 510, "end_pos": 512, "annotation": "n_glycosylation_sequon" }, { "start_pos": 593, "end_pos": 595, "annotation": "n_glycosylation_sequon" }, { "start_pos": 645, "end_pos": 647, "annotation": "n_glycosylation_sequon" }, { "start_pos": 655, "end_pos": 657, "annotation": "n_glycosylation_sequon" }, { "start_pos": 728, "end_pos": 730, "annotation": "n_glycosylation_sequon" }, { "start_pos": 761, "end_pos": 763, "annotation": "n_glycosylation_sequon" }, { "start_pos": 816, "end_pos": 818, "annotation": "n_glycosylation_sequon" }, { "start_pos": 979, "end_pos": 981, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], 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"MEGLEEDVKFIVDETLDFGGLSPSDSREEEDIAVLATPEKPVRRGLSHRSDPNAVVPAPQGLRLSLGPLSPEKLEEILDEANRLAAQLEQCALQERENTGEGPVPRRVKPSPRRETFVLKDSPVRDLLPTVSSLARSTPSPSSLTPRLRSSDRKGSVRALRTTSGKRPPSVKRESPTCSLFPASKSPASSPLARSTPPVRGKAGPSGRAVASPPTPVRPVLTPQPSTSNSQRPSRPQGATAKPSSRLPVPSAIPRPASKMPLTGRTVPSSKGALPPDPLSARKGLPRPGATGHKVPVSQRPNPPITSVGRSNLQPPRKVTAPGPTR", "length": 326, "header": "tr|A0A287BD50-1|A0A287BD50_PIG Isoform 1 of Proline and serine rich coiled-coil 1 OS=Sus scrofa OX=9823 GN=PSRC1 PE=4 SV=1 CANONICAL=A0A287BD50-1" }, "isoforms": [ { "isoform_ac": "A0A287B2Z8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B2Z8/entry", "sequence": { "sequence": "MEGLEEDVKFIVDETLDFGGLSPSDSREEEDIAVLATPEKPVRRGLSHRSDPNAVVPAPQGLRLSLGPLSPEKLEEILDEANRLAAQLEQCALQERENTGEGPVPRRVKPSPRRETFVLKDSPVRDLLPTVSSLARSTPSPSSLTPRLRSSDRKGSVRALRTTSGKRPPSVKRESPTCSLFPASKSPASSPLARSTPPVRGKAGPSGRAVASEKTLAAKPWVCGRREDVELTLKFLTSSPPGPPTPVRPVLTPQPSTSNSQRPSRPQGATAKPSSRLPVPSAIPRPASKMPLTGRTVPSSKGALPPDPLSARKGLPRPGATGHKVRKGGEVPVSQRPNPPITSVGRSNLQPPRKVTAPGPTR", "length": 362, "header": "tr|A0A287B2Z8-1|A0A287BD50_PIG Computationally mapped isoform of Proline and serine rich coiled-coil 1 OS=Sus scrofa OX=9823 GN=PSRC1 PE=4 SV=1 CANONICAL=A0A287BD50-1" }, "locus": { "chromosome": "4", "start_pos": 110816513, "end_pos": 110814064, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066176.3", "url": "https://www.ensembl.org/id/ENSSSCT00000066176.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050630.2", "url": "https://www.ensembl.org/id/ENSSSCP00000050630.2" } ] } }, { "isoform_ac": "A0A287BD50-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BD50/entry", "sequence": { "sequence": "MEGLEEDVKFIVDETLDFGGLSPSDSREEEDIAVLATPEKPVRRGLSHRSDPNAVVPAPQGLRLSLGPLSPEKLEEILDEANRLAAQLEQCALQERENTGEGPVPRRVKPSPRRETFVLKDSPVRDLLPTVSSLARSTPSPSSLTPRLRSSDRKGSVRALRTTSGKRPPSVKRESPTCSLFPASKSPASSPLARSTPPVRGKAGPSGRAVASPPTPVRPVLTPQPSTSNSQRPSRPQGATAKPSSRLPVPSAIPRPASKMPLTGRTVPSSKGALPPDPLSARKGLPRPGATGHKVPVSQRPNPPITSVGRSNLQPPRKVTAPGPTR", "length": 326, "header": "tr|A0A287BD50-1|A0A287BD50_PIG Isoform 1 of Proline and serine rich coiled-coil 1 OS=Sus scrofa OX=9823 GN=PSRC1 PE=4 SV=1 CANONICAL=A0A287BD50-1" }, "locus": { "chromosome": "4", "start_pos": 110816513, "end_pos": 110814064, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066191.3", "url": "https://www.ensembl.org/id/ENSSSCT00000066191.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054254.1", "url": "https://www.ensembl.org/id/ENSSSCP00000054254.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 215, "start_aa": "Thr", "end_pos": 215, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr215", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 325, "start_aa": "Thr", "end_pos": 325, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr325", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B2Z8", "url": "https://www.uniprot.org/uniprotkb/A0A287B2Z8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100156693", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156693", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "G3I7B0-1", "protein_name": "Proline/serine-rich coiled-coil protein 1 isoform X1", "gene_name": "Psrc1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEDLKEDVKFIVDETLDFGGLSPSDSHEEEDLTVLVSPEKPLRRGLSHRSNPNAAVAPTLQGVRFSLGPLSPEKLEEILDEANRLAAQLEECALQDRESAGAGPGKPSPRAKPSPRRETFVLKDSPVRDLLPTVSSWSTPSPSSLTGLRSSDKKGSARAVRVTSGKKPPSTKKESPTCNLFPAPRSPALSPLAQSSLPPRRKTGPSARTTASPPVPVRPVLAPQPSTSNSQCSSRLQGAAAKSSSRLPVPSAIPRPATRMPLTSRSVPKPGKSTLPPDSLSARKGLPSSAGHRAPVSQRTNLPTPSAPRGRMQPLRKAAVPGPTR", "length": 325 }, "evidence": [ { "id": "A0A287BD50", "url": "https://omabrowser.org/oma/group/A0A287BD50/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q3KR66-1", "protein_name": "Proline/serine-rich coiled-coil protein 1", "gene_name": "Psrc1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEDLKEDIKFIVDETLDFGGLSPSDSHEEEDITVLVSPEKPLRRGLSHRSNPNAVAPALQGVRFSLGPLSPEKLEEILDEANRLAAQLEECALKDSENAAAGPGRPSPRGKPSPRRETFVLKDSPVRDLLPTVSSWSAPPPSNLTGLRSSDKKGSARAGRVTAGKKPSSIKKESPTCNLFSASKNPGRSPLAQPTLPPRRKTGSGARTVASPPIPVRPAPQSSASNSQCSSWLQGAAAKSSSRLPFPSAIPKPAIRMPLTGRSIPAGKGALAPDPLPTQKGHPSTVGHRAPVSQRTNLPTIGAARGRTSSAARGRVQPLRKAAVPGPTR", "length": 329 }, "evidence": [ { "id": "A0A287BD50", "url": "https://omabrowser.org/oma/group/A0A287BD50/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6PGN9-1", "protein_name": "Proline/serine-rich coiled-coil protein 1", "gene_name": "PSRC1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"MEDLKEDIKFIVDETLDFGGLSPSDSHEEEDITVLVSPEKPLRRGLAHRSNPNEVAPALQGVRFSLGPLSPEKLEEILDEANRLAAQLEECALKDRERAGTGPGRPSPRGKPSPRRETFVLKDSPVRDLLPTVSSWSTPPPSSLAGLRSSDKKGSARAVRVASGKKPSSIKKESPTCNLFPASKSPGRSPLAQPILPPRRKTGFGARTTASPPIPVRPVPQSSASNSQCSSRLQGAAVKSSSRLPVPSAIPKPATRVPLIGRSLPPGKGALAPDSLSTQKGHPSAIGHRASVSQKTNLPTTSAARGRTTSAARGRAQPLRKAAVPGPTR", "length": 329 }, "evidence": [ { "id": "A0A287BD50", "url": "https://omabrowser.org/oma/group/A0A287BD50/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "spindle pole", "id": "GO:0000922", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000922", "evidence": [ { "database": "UniProtKB", "id": "A0A287BD50", "url": "https://www.uniprot.org/uniprotkb/A0A287BD50" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A287BD50", "url": "https://www.uniprot.org/uniprotkb/A0A287BD50" } ], "pmid": "" }, { "name": "midbody", "id": "GO:0030496", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030496", "evidence": [ { "database": "UniProtKB", "id": "A0A287BD50", "url": "https://www.uniprot.org/uniprotkb/A0A287BD50" } ], "pmid": "" }, { "name": "spindle microtubule", "id": "GO:0005876", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005876", "evidence": [ { "database": "UniProtKB", "id": "A0A287BD50", "url": "https://www.uniprot.org/uniprotkb/A0A287BD50" } ], "pmid": "" }, { "name": "microtubule cytoskeleton", "id": "GO:0015630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015630", "evidence": [ { "database": "UniProtKB", "id": "A0A287BD50", "url": "https://www.uniprot.org/uniprotkb/A0A287BD50" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "A0A287BD50", "url": "https://www.uniprot.org/uniprotkb/A0A287BD50" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "positive regulation of DNA-templated transcription", "id": "GO:0045893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045893", "evidence": [ { "database": "UniProtKB", "id": "A0A287BD50", "url": "https://www.uniprot.org/uniprotkb/A0A287BD50" } ], "pmid": "" }, { "name": "negative regulation of cell growth", "id": "GO:0030308", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030308", "evidence": [ { "database": "UniProtKB", "id": "A0A287BD50", "url": "https://www.uniprot.org/uniprotkb/A0A287BD50" } ], "pmid": "" }, { "name": "mitotic metaphase chromosome alignment", "id": "GO:0007080", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007080", "evidence": [ { "database": "UniProtKB", "id": "A0A287BD50", "url": "https://www.uniprot.org/uniprotkb/A0A287BD50" } ], "pmid": "" }, { "name": "positive regulation of microtubule polymerization", "id": "GO:0031116", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031116", "evidence": [ { "database": "UniProtKB", "id": "A0A287BD50", "url": "https://www.uniprot.org/uniprotkb/A0A287BD50" } ], "pmid": "" }, { "name": "regulation of mitotic spindle organization", "id": "GO:0060236", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060236", "evidence": [ { "database": "UniProtKB", "id": "A0A287BD50", "url": "https://www.uniprot.org/uniprotkb/A0A287BD50" } ], "pmid": "" }, { "name": "microtubule bundle formation", "id": "GO:0001578", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001578", "evidence": [ { "database": "UniProtKB", "id": "A0A287BD50", "url": "https://www.uniprot.org/uniprotkb/A0A287BD50" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287BD50-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 326, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287BD50-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287BD50" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287BD50", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BD50" }, { "id": "PF15259", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15259" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "G2 and S phase-expressed protein 1 N-terminal", "eco_id": "ECO_0000259", "start_pos": 9, "end_pos": 98, "start_aa": "Lys", "end_aa": "Asn", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 215, 325 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B7I7-1", "uniprot_ac": "A0A287B7I7", "uniprot_id": "A0A287B7I7_PIG", "mass": { "chemical_mass": 170754.0, "monoisotopic_mass": 170754.0 }, "refseq": {}, "gene_names": [ { "name": "DISP1", "type": "recommended", "evidence": [ { "id": "A0A287B7I7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B7I7" } ] } ], "protein_names": [ { "name": "Protein dispatched homolog 1", "type": "recommended", "evidence": [ { "id": "A0A287B7I7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B7I7/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Functions in hedgehog (Hh) signaling. Regulates the release and extracellular accumulation of cholesterol-modified hedgehog proteins and is hence required for effective production of the Hh signal. Synergizes with SCUBE2 to cause an increase in SHH secretion.", "evidence": [ { "database": "UniProtKB", "id": "A0A287BQQ7", "url": "https://www.uniprot.org/uniprotkb/A0A287BQQ7#function" }, { "database": "UniProtKB", "id": "ARBA00060153", "url": "https://www.uniprot.org/uniprotkb/ARBA00060153#function" }, { "database": "UniProtKB", "id": "A0A287AUQ2", "url": "https://www.uniprot.org/uniprotkb/A0A287AUQ2#function" }, { "database": "UniProtKB", "id": "A0A287B7I7", "url": "https://www.uniprot.org/uniprotkb/A0A287B7I7#function" }, { "database": "UniProtKB", "id": "A0A287BNI9", "url": "https://www.uniprot.org/uniprotkb/A0A287BNI9#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B7I7", "url": "https://www.uniprot.org/uniprotkb/A0A287B7I7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DISP1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7I7", "locus": { "chromosome": "10", "start_pos": 11709888, "end_pos": 11526619, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000035479", "url": "https://www.ensembl.org/id/ENSSSCG00000035479" } ] } } ], "crossref": [ { "id": "ENSSSCG00000035479", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000035479", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "106505093", "url": "https://www.ncbi.nlm.nih.gov/gene/106505093", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000731", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000731", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004869", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004869", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052081", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052081", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053958", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053958", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR45951", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45951", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45951:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45951:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03176", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03176", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12349", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12349", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287AUQ2", "url": "https://www.uniprot.org/uniprotkb/A0A287AUQ2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AUQ2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AUQ2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B7I7", "url": "https://www.uniprot.org/uniprotkb/A0A287B7I7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B7I7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7I7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BNI9", "url": "https://www.uniprot.org/uniprotkb/A0A287BNI9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BNI9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BNI9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BQQ7", "url": "https://www.uniprot.org/uniprotkb/A0A287BQQ7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BQQ7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BQQ7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAMSTGSHDFVVLSNGSIATSTTNPGPLTPCDGDLAAQQLAPKEAPRTKVSPNGCLQVNGTVKSSFLPLDNQRTPQRLPQCCHPCPYHHPLTSHDSHQECHREAGSAAPPALASCCMQPHSEYSASLCPNHSPVYQTACCLQPSPSFCLHHPWPDHFQHQPVPQHIARQTASLGFLCHLCSCSYAALIADWPVVVLGLCTVFIVVCALVGVLVPELPDFSDPLLGFEPRGTTIGQRLVTWSNMVKNTGYKATLANYPFKYADEQAKSHRDDRWSEDHYDREKREVDWNFHKDSFFCDVPSDRYSRVVFTSAAGETLWNLPAIKSMCNVDNSRIRSHPQFGDLCQRTTAASCCPSWTLGNYIAILNNRSSCQKIVERDVSHTLKLLRTCAKHYQNGTLEPDCWDVAARRKDQLKCSSVPRKCTKYNAVYQILHYLVDKDFLAPRAADYAAPALKYSMLFSPTEKGESMMDIYLDNFENWNASDGVTTITGIEFGIKHSLFQDYLLMDTVYPAIAIVIVLLVMCVYTKSMFITLMAMFAIISSLIVSYFLYRVVFNFEFFPFMNLTALIILVGIGADDAFVLCDVWNYTKFDKPHADTSETVSVTLQHAALSMFVTSFTTAAAFYANYVSNITAIRCFGVYAGTAILVNYVLMVTWLPAVVVLHERYLLNIFSCFKKPQPQIYENKSCWTAACRKCHQVLFAVSEASRIFFEKVLPCIVIKFRYLWLFWFLALTVGGAYIVCIHPKMKLPSLELSEFQVFRPSHPFERYDAEFKKLFMFERVHHGEELHMPITVIWGVSPEDNGNPLNPKSKGKLTLDSSFSIASPASQVWILRFCQKLRNQTFFYQTDQQDFTSCFIETFKQWMENQDCDEPALYPCCSHWSFPYKQEIFELCIKRAIMELERSTGYHLDSKTPGPRFDINDTIRAVVLEFPSTYLFTLAYEKMHQFYKEVDAWISSELSSAPEGLSNGWFVSNLEFYDLQDSLSDGTLIAMGLSVAVAFSVMLLTTWNIVISLYAIISIAGTIFVTVGSLVLLGWELNVLESVTISVAVGLSVDFAVHYGVAYRLAPDADREGKVIFSLSRMGSAIAMAALTTFVAGAMMMPSTVLAYTQLGTFMMLIMCISWTFATFFFQCLCRCLGPQAACGQIPLPRRLQCSAFSPALSASPGDKGQSKTHAMNAYRLDPRDQKSEMEHEFYELEPLASPSCSASEKSTYEETHICSEFFNSQAKSLGLSVRAAYQGELSQSTKPETSSALFQPSLEQHTVCHFFSLNQRCGCPNAYTHLKYGPHACQQMGPCLCHQCAPPTSGLVRVQNGLVPLKAARQVPEGFVHPLPHVHPCPCLQGRGKAPAMQNSLPRGLFLHPVQQHQAPEKGSQNCVHSLQSTEEGLPETAEPSSSSSLCRDAAAVQKACWEPGTHQRGLCKHRDLGGGAGSAAAANQGSGSVSQSDKAEGLVEPRVSQTDVIVSSGHLSQSEPQFLFNHLVGEAAYGCCPSNPPRCGRVGRIKCGSVDCQIPNIEANVPAVSTHSELSGESLLIKTL", "length": 1538, "header": "tr|A0A287B7I7-1|A0A287B7I7_PIG Isoform 1 of Protein dispatched homolog 1 OS=Sus scrofa OX=9823 GN=DISP1 PE=3 SV=2 CANONICAL=A0A287B7I7-1" }, "isoforms": [ { "isoform_ac": "A0A287AUQ2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AUQ2/entry", "sequence": { "sequence": "MAASQPALPTLVPSPPVMETLQPSSSHPKKHQGQKPSRPFKLPKSYAALIADWPVVVLGLCTVFIVVCALVGVLVPELPDFSDPLLGFEPRGTTIGQRLVTWSNMVKNTGYKATLANYPFKYADEQAKSHRDDRWSEDHYDREKREVDWNFHKDSFFCDVPSDRYSRVVFTSAAGETLWNLPAIKSMCNVDNSRIRSHPQFGDLCQRTTAASCCPSWTLGNYIAILNNRSSCQKIVERDVSHTLKLLRTCAKHYQNGTLEPDCWDVAARRKDQLKCSSVPRKCTKYNAVYQILHYLVDKDFLAPRAADYAAPALKYSMLFSPTEKGESMMDIYLDNFENWNASDGVTTITGIEFGIKHSLFQDYLLMDTVYPAIAIVIVLLVMCVYTKSMFITLMAMFAIISSLIVSYFLYRVVFNFEFFPFMNLTALIILVGIGADDAFVLCDVWNYTKFDKPHADTSETVSVTLQHAALSMFVTSFTTAAAFYANYVSNITAIRCFGVYAGTAILVNYVLMVTWLPAVVVLHERYLLNIFSCFKKPQPQIYENKSCWTAACRKCHQVLFAVSEASRIFFEKVLPCIVIKFRYLWLFWFLALTVGGAYIVCIHPKMKLPSLELSEFQVFRPSHPFERYDAEFKKLFMFERVHHGEELHMPITVIWGVSPEDNGNPLNPKSKGKLTLDSSFSIASPASQVWILRFCQKLRNQTFFYQTDQQDFTSCFIETFKQWMENQDCDEPALYPCCSHWSFPYKQEIFELCIKRAIMELERSTGYHLDSKTPGPRFDINDTIRAVVLEFPSTYLFTLAYEKMHQFYKEVDAWISSELSSAPEGLSNGWFVSNLEFYDLQDSLSDGTLIAMGLSVAVAFSVMLLTTWNIVISLYAIISIAGTIFVTVGSLVLLGWELNVLESVTISVAVGLSVDFAVHYGVAYRLAPDADREGKVIFSLSRMGSAIAMAALTTFVAGAMMMPSTVLAYTQLGTFMMLIMCISWTFATFFFQCLCRCLGPQAACGQIPLPRRLQCSAFSPALSASPGDKGQSKTHAMNAYRLDPRDQKSEMEHEFYELEPLASPSCSASEKSTYEETHICSEFFNSQAKSLGLSVRAAYQGELSQSTKPETSSALFQPSLEQHTVCHFFSLNQRCGCPNAYTHLKYGPHACQQMGPCLCHQCAPPTSGLVRVQNGLVPLKAARQVPEGFVHPLPHVHPCPCLQGRGKAPAMQNSLPRGLFLHPVQQHQAPEKGSQNCVHSLQSTEEGLPETAEPSSSSSLCRDAAAVQKACWEPGTHQRGLCKHRDLGGGAGSAAAANQGSGSVSQSDKAEGLVEPRVSQTDVIVSSGHLSQSEPQFLFNHLVGEAAYGCCPSNPPRCGRVGRIKCGSVDCQIPNIEANVPAVSTHSELSGESLLIKTL", "length": 1400, "header": "tr|A0A287AUQ2-1|A0A287B7I7_PIG Computationally mapped isoform of Protein dispatched homolog 1 OS=Sus scrofa OX=9823 GN=DISP1 PE=3 SV=2 CANONICAL=A0A287B7I7-1" }, "locus": { "chromosome": "10", "start_pos": 11709865, "end_pos": 11654329, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066392.3", "url": "https://www.ensembl.org/id/ENSSSCT00000066392.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047660.2", "url": "https://www.ensembl.org/id/ENSSSCP00000047660.2" } ] } }, { "isoform_ac": "A0A287B7I7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7I7/entry", "sequence": { "sequence": "MAMSTGSHDFVVLSNGSIATSTTNPGPLTPCDGDLAAQQLAPKEAPRTKVSPNGCLQVNGTVKSSFLPLDNQRTPQRLPQCCHPCPYHHPLTSHDSHQECHREAGSAAPPALASCCMQPHSEYSASLCPNHSPVYQTACCLQPSPSFCLHHPWPDHFQHQPVPQHIARQTASLGFLCHLCSCSYAALIADWPVVVLGLCTVFIVVCALVGVLVPELPDFSDPLLGFEPRGTTIGQRLVTWSNMVKNTGYKATLANYPFKYADEQAKSHRDDRWSEDHYDREKREVDWNFHKDSFFCDVPSDRYSRVVFTSAAGETLWNLPAIKSMCNVDNSRIRSHPQFGDLCQRTTAASCCPSWTLGNYIAILNNRSSCQKIVERDVSHTLKLLRTCAKHYQNGTLEPDCWDVAARRKDQLKCSSVPRKCTKYNAVYQILHYLVDKDFLAPRAADYAAPALKYSMLFSPTEKGESMMDIYLDNFENWNASDGVTTITGIEFGIKHSLFQDYLLMDTVYPAIAIVIVLLVMCVYTKSMFITLMAMFAIISSLIVSYFLYRVVFNFEFFPFMNLTALIILVGIGADDAFVLCDVWNYTKFDKPHADTSETVSVTLQHAALSMFVTSFTTAAAFYANYVSNITAIRCFGVYAGTAILVNYVLMVTWLPAVVVLHERYLLNIFSCFKKPQPQIYENKSCWTAACRKCHQVLFAVSEASRIFFEKVLPCIVIKFRYLWLFWFLALTVGGAYIVCIHPKMKLPSLELSEFQVFRPSHPFERYDAEFKKLFMFERVHHGEELHMPITVIWGVSPEDNGNPLNPKSKGKLTLDSSFSIASPASQVWILRFCQKLRNQTFFYQTDQQDFTSCFIETFKQWMENQDCDEPALYPCCSHWSFPYKQEIFELCIKRAIMELERSTGYHLDSKTPGPRFDINDTIRAVVLEFPSTYLFTLAYEKMHQFYKEVDAWISSELSSAPEGLSNGWFVSNLEFYDLQDSLSDGTLIAMGLSVAVAFSVMLLTTWNIVISLYAIISIAGTIFVTVGSLVLLGWELNVLESVTISVAVGLSVDFAVHYGVAYRLAPDADREGKVIFSLSRMGSAIAMAALTTFVAGAMMMPSTVLAYTQLGTFMMLIMCISWTFATFFFQCLCRCLGPQAACGQIPLPRRLQCSAFSPALSASPGDKGQSKTHAMNAYRLDPRDQKSEMEHEFYELEPLASPSCSASEKSTYEETHICSEFFNSQAKSLGLSVRAAYQGELSQSTKPETSSALFQPSLEQHTVCHFFSLNQRCGCPNAYTHLKYGPHACQQMGPCLCHQCAPPTSGLVRVQNGLVPLKAARQVPEGFVHPLPHVHPCPCLQGRGKAPAMQNSLPRGLFLHPVQQHQAPEKGSQNCVHSLQSTEEGLPETAEPSSSSSLCRDAAAVQKACWEPGTHQRGLCKHRDLGGGAGSAAAANQGSGSVSQSDKAEGLVEPRVSQTDVIVSSGHLSQSEPQFLFNHLVGEAAYGCCPSNPPRCGRVGRIKCGSVDCQIPNIEANVPAVSTHSELSGESLLIKTL", "length": 1538, "header": "tr|A0A287B7I7-1|A0A287B7I7_PIG Isoform 1 of Protein dispatched homolog 1 OS=Sus scrofa OX=9823 GN=DISP1 PE=3 SV=2 CANONICAL=A0A287B7I7-1" }, "locus": { "chromosome": "10", "start_pos": 11709865, "end_pos": 11654286, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062555.2", "url": "https://www.ensembl.org/id/ENSSSCT00000062555.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052434.2", "url": "https://www.ensembl.org/id/ENSSSCP00000052434.2" } ] } }, { "isoform_ac": "A0A287BNI9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BNI9/entry", "sequence": { "sequence": 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"length": 1535, "header": "tr|A0A287BNI9-1|A0A287BNI9_PIG Computationally mapped isoform of Protein dispatched homolog 1 OS=Sus scrofa OX=9823 GN=DISP1 PE=3 SV=1 CANONICAL=A0A287B7I7-1" }, "locus": { "chromosome": "10", "start_pos": 11709865, "end_pos": 11654286, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049909.3", "url": "https://www.ensembl.org/id/ENSSSCT00000049909.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058073.1", "url": "https://www.ensembl.org/id/ENSSSCP00000058073.1" } ] } }, { "isoform_ac": "A0A287BQQ7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BQQ7/entry", "sequence": { "sequence": "MLFGAAAAPRRGTGRPGSRNWSMAMSTGSHDFVVLSNGSIATSTTNPGPLTPCDGDLAAQQLAPKEAPRTKVSPNGCLQVNGTVKSSFLPLDNQRTPQRLPQCCHPCPYHHPLTSHDSHQECHREAGSAAPPALASCCMQPHSEYSASLCPNHSPVYQTACCLQPSPSFCLHHPWPDHFQHQPVPQHIARVRPSRPFKLPKSYAALIADWPVVVLGLCTVFIVVCALVGVLVPELPDFSDPLLGFEPRGTTIGQRLVTWSNMVKNTGYKATLANYPFKYADEQAKSHRDDRWSEDHYDREKREVDWNFHKDSFFCDVPSDRYSRVVFTSAAGETLWNLPAIKSMCNVDNSRIRSHPQFGDLCQRTTAASCCPSWTLGNYIAILNNRSSCQKIVERDVSHTLKLLRTCAKHYQNGTLEPDCWDVAARRKDQLKCSSVPRKCTKYNAVYQILHYLVDKDFLAPRAADYAAPALKYSMLFSPTEKGESMMDIYLDNFENWNASDGVTTITGIEFGIKHSLFQDYLLMDTVYPAIAIVIVLLVMCVYTKSMFITLMAMFAIISSLIVSYFLYRVVFNFEFFPFMNLTALIILVGIGADDAFVLCDVWNYTKFDKPHADTSETVSVTLQHAALSMFVTSFTTAAAFYANYVSNITAIRCFGVYAGTAILVNYVLMVTWLPAVVVLHERYLLNIFSCFKKPQPQIYENKSCWTAACRKCHQVLFAVSEASRIFFEKVLPCIVIKFRYLWLFWFLALTVGGAYIVCIHPKMKLPSLELSEFQVFRPSHPFERYDAEFKKLFMFERVHHGEELHMPITVIWGVSPEDNGNPLNPKSKGKLTLDSSFSIASPASQVWILRFCQKLRNQTFFYQTDQQDFTSCFIETFKQWMENQDCDEPALYPCCSHWSFPYKQEIFELCIKRAIMELERSTGYHLDSKTPGPRFDINDTIRAVVLEFPSTYLFTLAYEKMHQFYKEVDAWISSELSSAPEGLSNGWFVSNLEFYDLQDSLSDGTLIAMGLSVAVAFSVMLLTTWNIVISLYAIISIAGTIFVTVGSLVLLGWELNVLESVTISVAVGLSVDFAVHYGVAYRLAPDADREGKVIFSLSRMGSAIAMAALTTFVAGAMMMPSTVLAYTQLGTFMMLIMCISWTFATFFFQCLCRCLGPQAACGQIPLPRRLQCSAFSPALSASPGDKGQSKTHAMNAYRLDPRDQKSEMEHEFYELEPLASPSCSASEKSTYEETHICSEFFNSQAKSLGLSVRAAYQGELSQSTKPETSSALFQPSLEQHTVCHFFSLNQRCGCPNAYTHLKYGPHACQQMGPCLCHQCAPPTSGLVRVQNGLVPLKAARQVPEGFVHPLPHVHPCPCLQGRGKAPAMQNSLPRGLFLHPVQQHQAPEKGSQNCVHSLQSTEEGLPETAEPSSSSSLCRDAAAVQKACWEPGTHQRGLCKHRDLGGGAGSAAAANQGSGSVSQSDKAEGLVEPRVSQTDVIVSSGHLSQSEPQFLFNHLVGEAAYGCCPSNPPRCGRVGRIKCGSVDCQIPNIEANVPAVSTHSELSGESLLIKTL", "length": 1557, "header": "tr|A0A287BQQ7-1|A0A287B7I7_PIG Computationally mapped isoform of Protein dispatched homolog 1 OS=Sus scrofa OX=9823 GN=DISP1 PE=3 SV=1 CANONICAL=A0A287B7I7-1" }, "locus": { "chromosome": "10", "start_pos": 11709865, "end_pos": 11526687, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039557.2", "url": "https://www.ensembl.org/id/ENSSSCT00000039557.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058504.2", "url": "https://www.ensembl.org/id/ENSSSCP00000058504.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1026, "start_aa": "Thr", "end_pos": 1026, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1026", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287BQQ7", "url": "https://www.uniprot.org/uniprotkb/A0A287BQQ7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A287B7I7", "url": "https://www.uniprot.org/uniprotkb/A0A287B7I7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "smoothened signaling pathway", "id": "GO:0007224", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007224", "evidence": [ { "database": "UniProtKB", "id": "A0A287B7I7", "url": "https://www.uniprot.org/uniprotkb/A0A287B7I7" } ], "pmid": "" }, { "name": "diaphragm development", "id": "GO:0060539", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060539", "evidence": [ { "database": "UniProtKB", "id": "A0A287B7I7", "url": "https://www.uniprot.org/uniprotkb/A0A287B7I7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 130, "end_pos": 132, "annotation": "n_glycosylation_sequon" }, { "start_pos": 15, "end_pos": 17, "annotation": "n_glycosylation_sequon" }, { "start_pos": 366, "end_pos": 368, "annotation": "n_glycosylation_sequon" }, { "start_pos": 394, "end_pos": 396, "annotation": "n_glycosylation_sequon" }, { "start_pos": 479, "end_pos": 481, "annotation": "n_glycosylation_sequon" }, { "start_pos": 562, "end_pos": 564, "annotation": "n_glycosylation_sequon" }, { "start_pos": 585, "end_pos": 587, "annotation": "n_glycosylation_sequon" }, { "start_pos": 59, "end_pos": 61, "annotation": "n_glycosylation_sequon" }, { "start_pos": 629, "end_pos": 631, "annotation": "n_glycosylation_sequon" }, { "start_pos": 683, "end_pos": 685, "annotation": "n_glycosylation_sequon" }, { "start_pos": 839, "end_pos": 841, "annotation": "n_glycosylation_sequon" }, { 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"sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B4Q0-1", "uniprot_ac": "A0A287B4Q0", "uniprot_id": "A0A287B4Q0_PIG", "mass": { "chemical_mass": 93462.0, "monoisotopic_mass": 93462.0 }, "refseq": { "ac": "XP_020929001", "name": "serine-rich coiled-coil domain-containing protein 2 isoform X11", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020929001" }, "gene_names": [ { "name": "CCSER2", "type": "recommended", "evidence": [ { "id": "A0A287B4Q0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B4Q0" } ] }, { "name": "CCSER2", "type": "synonym", "evidence": [ { "id": "XP_020929001", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020929001" } ] } ], "protein_names": [ { "name": "Coiled-coil serine rich protein 2", "type": "synonym", "evidence": [ { "id": "A0A287B4Q0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B4Q0/entry#names_and_taxonomy" } ] }, { "name": "serine-rich coiled-coil domain-containing protein 2 isoform X11", "type": "synonym", "evidence": [ { "id": "XP_020929001", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020929001" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B4Q0", "url": "https://www.uniprot.org/uniprotkb/A0A287B4Q0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CCSER2", "url": "https://www.uniprot.org/uniprotkb/A0A287B4Q0", "locus": { "chromosome": "14", "start_pos": 85677928, "end_pos": 85544126, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000010351", "url": "https://www.ensembl.org/id/ENSSSCG00000010351" } ] } } ], "crossref": [ { "id": "ENSSSCG00000010351", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000010351", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100156899", "url": "https://www.ncbi.nlm.nih.gov/gene/100156899", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR029627", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029627", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "NECTKHT", "url": "https://omabrowser.org/oma/group/NECTKHT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR22461", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22461", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22461:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22461:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "XP_020929001", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020929001", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B4Q0", "url": "https://www.uniprot.org/uniprotkb/A0A287B4Q0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B4Q0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B4Q0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BPC5", "url": "https://www.uniprot.org/uniprotkb/A0A287BPC5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BPC5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BPC5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QUK4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUK4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QUK4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUK4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SEP6", "url": "https://www.uniprot.org/uniprotkb/F1SEP6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SEP6-1", "url": "https://www.uniprot.org/uniprotkb/F1SEP6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LM56", "url": "https://www.uniprot.org/uniprotkb/I3LM56", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LM56-1", "url": "https://www.uniprot.org/uniprotkb/I3LM56-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEEKTQIKTFLGSRLPKYGTKSVRSTLQPMPNGKPVNLLGTSKSSNIKSFIKNNGSDCSSSHSFNWRTANKYQFSAQSPEEPNNTQSSHDKVIDPEKHVPTQGVFDKNGIKGGLKSISLFTSKLAKPTTMFVSSTEELNQKSLSGPSNLGKFTKGTLLGRTSYASVSAPKSQLNGFYGNRSTGSIQRPRANSCATRSSSGESLAQSLDNIKSLACEKMVRSQSFSHSIQNSFLPPSSITRSHSFNRAADLTKPYQNQQPPIRVPLRSSMLTRNSRQTEVLNGNEHLGYGFNRPYAAGGKKLALPNGPGVTSTLGYRMVHPSLLKSSRPPFSGTITVDGNKNSPADTCIEEDDTLVTKDRAANKDQELIENDSYRTENDQTVKHDAKIRYLSDDVDDISLSSLSSSDKNDLSEDFSDDFIDMEDSNRTRITPEEISLKEEKHENVPPKDIFDSPKENEKSFIKTEEWIDISVSDRSECSKHTSGNNLISPDTDYRAGSSFELSPSDSSDGTYMWDEEGLEPIGNVHPVGSYESSEMNSIDILNNLESCDLEDDDLMLDVDLPEDAPLENVECDNMNRFDRSDRNVRQSQEGFWKRPPQRWSGQEHYHLSHPDHYHHHGKSDLSRGSPYRESPLGHFESYGGTPFFQAQKMFVDVPENTVILDEMTLRHMVQDCTAVKTQLLKLKRLLHQHDGSGSLHDVQLSLPSSPEPEDSDQIYKNEDLLNEINQLKEEIKKKDEKIQLLEHQLATRCNCNQKSKEEKCTYADKYTQTPWRRIPGGYSAPSFSPWQGSFQGIPRTVPPHRRQTSSTTAFQQPSQTHRPRPGKTNKAATYRGPQ", "length": 834, "header": "tr|A0A287B4Q0-1|A0A287B4Q0_PIG Isoform 1 of Coiled-coil serine rich protein 2 OS=Sus scrofa OX=9823 GN=CCSER2 PE=3 SV=1 CANONICAL=A0A287B4Q0-1" }, "isoforms": [ { "isoform_ac": "A0A287B4Q0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B4Q0/entry", "sequence": { "sequence": "MEEKTQIKTFLGSRLPKYGTKSVRSTLQPMPNGKPVNLLGTSKSSNIKSFIKNNGSDCSSSHSFNWRTANKYQFSAQSPEEPNNTQSSHDKVIDPEKHVPTQGVFDKNGIKGGLKSISLFTSKLAKPTTMFVSSTEELNQKSLSGPSNLGKFTKGTLLGRTSYASVSAPKSQLNGFYGNRSTGSIQRPRANSCATRSSSGESLAQSLDNIKSLACEKMVRSQSFSHSIQNSFLPPSSITRSHSFNRAADLTKPYQNQQPPIRVPLRSSMLTRNSRQTEVLNGNEHLGYGFNRPYAAGGKKLALPNGPGVTSTLGYRMVHPSLLKSSRPPFSGTITVDGNKNSPADTCIEEDDTLVTKDRAANKDQELIENDSYRTENDQTVKHDAKIRYLSDDVDDISLSSLSSSDKNDLSEDFSDDFIDMEDSNRTRITPEEISLKEEKHENVPPKDIFDSPKENEKSFIKTEEWIDISVSDRSECSKHTSGNNLISPDTDYRAGSSFELSPSDSSDGTYMWDEEGLEPIGNVHPVGSYESSEMNSIDILNNLESCDLEDDDLMLDVDLPEDAPLENVECDNMNRFDRSDRNVRQSQEGFWKRPPQRWSGQEHYHLSHPDHYHHHGKSDLSRGSPYRESPLGHFESYGGTPFFQAQKMFVDVPENTVILDEMTLRHMVQDCTAVKTQLLKLKRLLHQHDGSGSLHDVQLSLPSSPEPEDSDQIYKNEDLLNEINQLKEEIKKKDEKIQLLEHQLATRCNCNQKSKEEKCTYADKYTQTPWRRIPGGYSAPSFSPWQGSFQGIPRTVPPHRRQTSSTTAFQQPSQTHRPRPGKTNKAATYRGPQ", "length": 834, "header": "tr|A0A287B4Q0-1|A0A287B4Q0_PIG Isoform 1 of Coiled-coil serine rich protein 2 OS=Sus scrofa OX=9823 GN=CCSER2 PE=3 SV=1 CANONICAL=A0A287B4Q0-1" }, "locus": { "chromosome": "14", "start_pos": 85673251, "end_pos": 85576100, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047184.3", "url": "https://www.ensembl.org/id/ENSSSCT00000047184.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051085.1", "url": "https://www.ensembl.org/id/ENSSSCP00000051085.1" } ] } }, { "isoform_ac": "A0A287BPC5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BPC5/entry", "sequence": { "sequence": "MEEKTQIKTFLGSRLPKYGTKSVRSTLQPMPNGKPVNLLGTSKSSNIKSFIKNNGSDCSSSHSFNWRTANKYQFSAQSPEEPNNTQSSHDKVIDPEKHVPTQGVFDKNGIKGGLKSISLFTSKLAKPTTMFVSSTEELNQKSLSGPSNLGKFTKGTLLGRTSYASVSAPKSQLNGFYGNRSTGSIQRPRANSCATRSSSGESLAQSLDNIKSLACEKMVRSQSFSHSIQNSFLPPSSITRSHSFNRAADLTKPYQNQQPPIRVPLRSSMLTRNSRQTEVLNGNEHLGYGFNRPYAAGGKKLALPNGPGVTSTLGYRMVHPSLLKSSRPPFSGTITVDGNKNSPADTCIEEDDTLVTKDRAANKDQELIENDSYRTENDQTVKHDAKIRYLSDDVDDISLSSLSSSDKNDLSEDFSDDFIDMEDSNRTRITPEEISLKEEKHENVPPKDIFDSPKENEKSFIKTEEWIDISVSDRSECSKHTSGNNLISPDTDYRAGSSFELSPSDSSDGTYMWDEEGLEPIGNVHPVGSYESSEMNSIDILNNLESCDLEDDDLMLDVDLPEDAPLENVECDNMNRFDRSDRNVRQSQEGFWKRPPQRWSGQEHYHLSHPDHYHHHGKSDLSRGSMCVSRDAFNNLISSLQHCLGLHFLLAQSLKVSQRGSPYRESPLGHFESYGGTPFFQAQKMFVDVPENTVILDEMTLRHMVQDCTAVKTQLLKLKRLLHQHDGSGSLHDVQLSLPSSPEPEDSDQIYKNEDLLNEINQLKEEIKKKDEKIQLLEHQLATRCNCNQKSKEEKCTYADKYTQTPWRRIPPPVLQPSSSLPRPTDHAQGKLIKPQHIEAHSECTVQSKHQGVAHLDEGFTHGLQQESNHGLEDQPFSPSPLFTKDVVKSTPSEANLNMTTNCQEPYHLANDQINDMQVVPTSLQTLPPSSTVDQAKRVGRNQTLPEGYASQPKSLHLLKPSILNSLVPPPVPETSPGRTPTCKKSPTITPDNSAKLQPTSSQTNLANNPNPKVSKLRPPSGSFKQKQISNPRLEPQNFQAKTSIPRPLTRRKEIMQNTNDNLNSGDCLASNQYSRLPKPKIH", "length": 1083, "header": "tr|A0A287BPC5-1|A0A287B4Q0_PIG Computationally mapped isoform of Coiled-coil serine rich protein 2 OS=Sus scrofa OX=9823 GN=CCSER2 PE=3 SV=2 CANONICAL=A0A287B4Q0-1" }, "locus": { "chromosome": "14", "start_pos": 85673975, "end_pos": 85576100, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045311.2", "url": "https://www.ensembl.org/id/ENSSSCT00000045311.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058031.2", "url": "https://www.ensembl.org/id/ENSSSCP00000058031.2" } ] } }, { "isoform_ac": "A0A5G2QUK4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUK4/entry", "sequence": { "sequence": "MEEKTQIKTFLGSRLPKYGTKSVRSTLQPMPNGKPVNLLGTSKSSNIKSFIKNNGSDCSSSHSFNWRTANKYQFSAQSPEEPNNTQSSHDKVIDPEKHVPTQGVFDKNGIKGGLKSISLFTSKLAKPTTMFVSSTEELNQKSLSGPSNLGKFTKGTLLGRTSYASVSAPKSQLNGFYGNRSTGSIQRPRANSCATRSSSGESLAQSLDNIKSLACEKMVRSQSFSHSIQNSFLPPSSITRSHSFNRAADLTKPYQNQQPPIRVPLRSSMLTRNSRQTEVLNGNEHLGYGFNRPYAAGGKKLALPNGPGVTSTLGYRMVHPSLLKSSRPPFSGTITVDGNKNSPADTCIEEDDTLVTKDRAANKDQELIENDSYRTENDQTVKHDAKIRYLSDDVDDISLSSLSSSDKNDLSEDFSDDFIDMEDSNRTRITPEEISLKEEKHENVPPKDIFDSPKENEKSFIKTEEWIDISVSDRSECSKHTSGNNLISPDTDYRAGSSFELSPSDSSDGTYMWDEEGLEPIGNVHPVGSYESSEMNSINEDLLNEINQLKEEIKKKDEKIQLLEHQLATRCNCNQKSKEEKCTYADKYTQTPWRRIPPPVLQPSSSLPRPTDHAQGKLIKPQHIEAHSECTVQSKHQGVAHLDEGFTHGLQQESNHGLEDQPFSPSPLFTKDVVKSTPSEANLNMTTNCQEPYHLANDQINDMQVVPTSLQTLPPSSTVDQAKRVGRNQTLPEGYASQPKSLHLLKPSILNSLVPPPVPETSPGRTPTCKKSPTITPDNSAKLQPTSSQTNLANNPNPKVSKLRPPSGSFKQKQISNPRLEPQNFQAKTSIPRPLTRRKEIMQNTNDNLNSGDCLASNQYSRLPKPKIH", "length": 869, "header": "tr|A0A5G2QUK4-1|A0A287B4Q0_PIG Computationally mapped isoform of Coiled-coil serine rich protein 2 OS=Sus scrofa OX=9823 GN=CCSER2 PE=3 SV=1 CANONICAL=A0A287B4Q0-1" }, "locus": { "chromosome": "14", "start_pos": 85673975, "end_pos": 85576100, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078227.1", "url": "https://www.ensembl.org/id/ENSSSCT00000078227.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061846.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061846.1" } ] } }, { "isoform_ac": "F1SEP6-1", "url": "https://www.uniprot.org/uniprotkb/F1SEP6/entry", "sequence": { "sequence": "MNRFDRSDRNVRQSQEGFWKRPPQRWSGQEHYHLSHPDHYHHHGKSDLSRGSPYRESPLGHFESYGGTPFFQAQKMFVDVPENTVILDEMTLRHMVQDCTAVKTQLLKLKRLLHQHDGSGSLHDVQLSLPSSPEPEDSDQIYKNEDLLNEINQLKEEIKKKDEKIQLLEHQLATRCNCNQKSKEEKCTYADKYTQTPWRRIPGGYSAPSFSPWQGSFQGIPRTVPPHRRQSESVSLTPILLWLPVHGIPFCMTVPPQHLLFRPE", "length": 264, "header": "tr|F1SEP6-1|A0A287B4Q0_PIG Computationally mapped isoform of Coiled-coil serine rich protein 2 OS=Sus scrofa OX=9823 GN=CCSER2 PE=3 SV=4 CANONICAL=A0A287B4Q0-1" }, "locus": { "chromosome": "14", "start_pos": 85660139, "end_pos": 85610927, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011332.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011332.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011039.5", "url": "https://www.ensembl.org/id/ENSSSCP00000011039.5" } ] } }, { "isoform_ac": "I3LM56-1", "url": "https://www.uniprot.org/uniprotkb/I3LM56/entry", "sequence": { "sequence": "MEEKTQIKTFLGSRLPKYGTKSVRSTLQPMPNGKPVNLLGTSKSSNIKSFIKNNGSDCSSSHSFNWRTANKYQFSAQSPEEPNNTQSSHDKVIDPEKHVPTQGVFDKNGIKGGLKSISLFTSKLAKPTTMFVSSTEELNQKSLSGPSNLGKFTKGTLLGRTSYASVSAPKSQLNGFYGNRSTGSIQRPRANSCATRSSSGESLAQSLDNIKSLACEKMVRSQSFSHSIQNSFLPPSSITRSHSFNRAADLTKPYQNQQPPIRVPLRSSMLTRNSRQTEVLNGNEHLGYGFNRPYAAGGKKLALPNGPGVTSTLGYRMVHPSLLKSSRPPFSGTITVDGNKNSPADTCIEEDDTLVTKDRAANKDQELIENDSYRTENDQTVKHDAKIRYLSDDVDDISLSSLSSSDKNDLSEDFSDDFIDMEDSNRTRITPEEISLKEEKHENVPPKDIFDSPKENEKSFIKTEEWIDISVSDRSECSKHTSGNNLISPDTDYRAGSSFELSPSDSSDGTYMWDEEGLEPIGNVHPVGSYESSEMNSIDILNNLESCDLEDDDLMLDVDLPEDAPLENVECDNMNRFDRSDRNVRQSQEGFWKRPPQRWSGQEHYHLSHPDHYHHHGKSDLSRGSPYRESPLGHFESYGGTPFFQAQKMFVDVPENTVILDEMTLRHMVQDCTAVKTQLLKLKRLLHQHDGSGSLHDVQLSLPSSPEPEDSDQIYKNEDLLNEINQLKEEIKKKDEKIQLLEHQLATRCNCNQKSKEEKCTYADKYTQTPWRRIPGSFQGIPRTVPPHRRQRVEKLVHYFSDKACLQYYSLPAAFPDPQTTPREN", "length": 825, "header": "tr|I3LM56-1|A0A287B4Q0_PIG Computationally mapped isoform of Coiled-coil serine rich protein 2 OS=Sus scrofa OX=9823 GN=CCSER2 PE=3 SV=3 CANONICAL=A0A287B4Q0-1" }, "locus": { "chromosome": "14", "start_pos": 85673220, "end_pos": 85576100, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031701.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031701.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000025177.3", "url": "https://www.ensembl.org/id/ENSSSCP00000025177.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QUK4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUK4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YD74-1", "protein_name": "Coiled-coil serine rich protein 2", "gene_name": "CCSER2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEEKNQIRTSLVSRLPKYGTKTLGSALQPTSNGTAVNLAGNNGGKNFSKHNGTVNMSSFSFNWRKSNRYQLHDQNERETNSKHNCNDKLIDSEKYSQSQGALSNDMLRVGLNNTASVGSKTAKQNNMFVSSTEESNPKSLPGLSGSAKFTKGALSGRTSCSGLSAPKSHLNGFYGSRPMVGLQRPRANSNASRTSSGESLVHSTDNSKSSSCEKMVRSQSFSHSIQSSFLPTASLTRSHSFNKAVDLTRPYSQNLAVRTSQRSTLWTRNSRQLDVPNGNESVKYGFTRPYSSISSSCTKKPPLSNGSGSAPSFGYRLSRPSLLKPTSQRFAGNIIMDGGKSTTPDTYIVENSEISTNINRTIEKNSIIESNAQRTESVDGLHESMGKHGSNVMCMSDDGDEISISSLSSSEKNDLSEDFSDDFIDLEDPNKTIRVQQKESCIQELEHGSITSVEPFTSLKESGGSCCNADDWLDINVSAMDDNSESTKHTAESVISPEMNYRAGSSFELSPSDSSDGTYMWDEEGLEPIGSVHPCGSYESSEMNSIDILNNLDSCDLEDDDLMLDVDLPEDPPNDKDECENMSRYDRQDRNARQHQEGFWKRAPQQRWNAQDHYHLGHTEHYIHGKNDLNRGSNYLESSVGHFESYGAPNFYQAPRQLVSLPENTVMLDEMTLRHMVQDCTAVKTQLLKLKRLLHQNDENDSLQDISLSIPSSPEPQEPESTYFKTEDLLNEIRQLKDELKKKDETINQLEHQLASRCNCQKDSQKPTVAKCVYADKFTQTSWRRSSPQVLQPSSSLPSSTDLVQGKLIKMPYIEAPSEYSKHGVHENGNHQNQNAANVSLRNSLNDVNTSVNTQLSIKDENALYLENVKNKCTEDPGEVASDKEGTLLSCSRLQTSTRFDAREVRTEVAVKGQPSFTYQASRPKTSRIAKPPTALVPPTMAVLTRSANHSAASKEPELLLSSSSTQLQPTSGPDDLKGKQSQKVSKLRPPTISFIKSKQVSSQKSTSVSQEPQSTCLKTNIPKPQVQRKENVQTQNTALHSGDSLPSNRHSRLPKPKTH", "length": 1060 }, "evidence": [ { "id": "A0A287B4Q0", "url": "https://omabrowser.org/oma/group/A0A287B4Q0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A9J7KBU2-1", "protein_name": "Serine-rich coiled-coil domain-containing protein 2 isoform X1", "gene_name": "Ccser2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEEKAQIKTFLGSRLPKYGTKSVRSTLQPMPNGATVTLLGNSKNSNVKSYIKNNGSDCSLSHSFNWRQANKYQLGSQNTAELNSIQSAHGKLTDPEQHAPAPGTLDGNGIKGGLKSASLFTSKLARPSTMFLSSTEELNQKSFSGPSNLGKFTKGTLLGRTSYSSVNAKSHLNTFYRNQSPGNMQKPRVNSCATRSSSGESLAQSPDNTKSITCEKMVRSQSFSHSIQNSFLPPSSITRSHSFNRAVDLTKPYQNQQLPVRVPLRSGMLTRNSRQSEVLNGNEHLGFGFNRPYAAGGKKLALSNGPGVSSTLGYRMVHPSLLKSGRPPFPGTMTVDSNKNSPADMCVEEEAVVLAKDDSTGKDQELVENESYRTDNDQTMKHESKIRYLSDDVDDISLSSLSSSDKNDLSEDFSDDFIDLEDSNRTRITPEEITLKEEKCENRSSKDIFDSPKENGQIFSKADEWIDISVSDRSECTKHTSGNNLISPDTDYRAGSSFELSPSDSSDGTYMWDEEGLEPIGTVHPVGSYDSSEMNSIDILNNLESCDLEDDDLMLDVDLPEDAPLENVECDNMNRFDRADRNVRQSQDGFWKRAPQRWSGQEHYHLSHPDHYHHHGKSDLSRGSPYRETPLGHFESYGGTPFFQAQKMFVDVPDNTVILDEMTLRHMVQDCTAVKTQLLKLKRLLHQHDGSGSLNDVELSLPSSPEPEDDDQIYKNEDLLNEIKQLKEEIKKKDEKIQLLEHRLATRCNCHQKSKEEKCTYADKYTQTPWRRIPGGYSAPSFSPWQGSFQGMPRTVPPHRRQSQTSFCISRLGKKPQVLQPSSSLPRPTDHAQGKLIKPQHIEAHSENTVQGMCQSDAHPDGSFTHGLQQENSYGLKDCPFSSSPQFPMDVVKDVPSETNLSMTMNAQEPHHLAKNQPSDMEFVTTPPQTPSKSSTVNQTKKVRRSQSPQPKSLQPSKPSILSSVAHPPDSDSSPSRTSTSKKAPVITPCNSKHQPTSNQNNLANNLNLKVSKLRPPSGSFKQKQISNPQPEPQNFQAKTSIPRPLARSKELQNSLSNLHSGDYVASNRYSRLPKPKIN", "length": 1079 }, "evidence": [ { "id": "A0A287B4Q0", "url": "https://omabrowser.org/oma/group/A0A287B4Q0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "D4A4E5-1", "protein_name": "Coiled-coil serine-rich protein 2", "gene_name": "Ccser2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEEKTQIKTFLGSKLPKYGMKSVRSTLQPMSNGATVTLLGTSKSSNVKSYIKNNGSDCSLSHSFNWRKTNKYQLGSQNTAELNNIQITHDKLIDTEQHAPAPGTLDGNGIEGGLNSTSLFTSKLARPSAMFVSSAEELSQKSFSGPSNLGKFTKGTLLGRTSYSSVSAKSHLNTFYGNRPPGNMQKPRMNSCASRSSSGESLAQSPDNAKSITCEKMVRSQSFSHSIQNAFLPPSSITRSHSFNRAVDLTKPYQNQQLPVRVPLRSGMLTRSARQSEVLNGNEHLGFGFNRPYAAGGKKLALSSGPGVSSTLVYRMGHPSLLKSSRPPFSGSMTVDSNKNPSADMCVEEEGVVSAKDSSTGKDQELIENESYRRDNDQTMKHDSKIRYLSDDVDDISLSSLSSSDKNDLSEDFSDDFIDLEDSNRTRITPEDITLKEEKHENGPSKDVFDSPKESEQIFSKADEWIDISVSDRSECTKHMSGNNLISPDTDYRAGSSFELSPSDSSDGTYMWDEEGLEPIGSVHPVGSYESSEMNSIDILNNLESCDLEDDDLMLDVDLPEDAPLENVDCDNMNRFDRTDRNVRQSQDGFWKRPSQRWSGQDHYHLSHPDHYHHHGKSDLSRGSPYRESPLGHFESYGGTPFFQAQKMFVDVPDNTVILDEMTLRHMVQDCTAVKTQLLKLKRLLHQHDGSGSLHDVQLSLPSSPEPEDGDQIYTNEDLLNEIKQLKEELKKKDEKIQLLEHQLATRCNCHQKSKEDRCAYADKFTQTPWRRSPGGYSAPSFSPWQGSFQGMPRTVPPHRRQTSSTTASQQPSQIYRPRPGKINKVTTYRGPQ", "length": 833 }, "evidence": [ { "id": "A0A287B4Q0", "url": "https://omabrowser.org/oma/group/A0A287B4Q0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q3UHI0-1", "protein_name": "Serine-rich coiled-coil domain-containing protein 2", "gene_name": "Ccser2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEEKTQIKTFLGSKLPKYGMKSVRSTLQPMPNGATVTLLGTSKSSNVKSYIKNNGSDCSLSHSFNWRKTNKYQLGSQNTAELNNIQSTHDKLIEPEQHAPAPGTLDGHGIKGGLKSASLFTSKLARPSTMFVSSAEELSQKSFSGPSNLGKFTKGTLLGRTSYSSVNAKSHLNAFYGNRSSGNVQKPRVNSCASRSSSGESLAQSPDNAKSITCEKMVRSQSFSHSIQNVFLPPSSITRSHSFNRAVDLTKPYQNQQLPVRVPLRSGMLTRSSLQSEVLNGNEHVGFGFNRPYAAAGKKLALSNGPAVSSTLVYRMAHPPLLKSSRPPFSGPMTVDSNKNPPADMCVEEEGMVSAQDSSPGKDQELIENESYRRDNDQTGKNESKVRYLSDDVDDISLSSLSSSDKNDLSEDFSDDFIDLEDSNRTRITPEEMTLKEEKHESRPSKDIFDSPKESEQAFSKAEEWIDISVSDRSECTKHTSGNNLISPDTDYRAGSSFELSPSDSSDGTYMWDEEGLEPIGSVHPVGSYESSEMNSIDILNNLESCDLEDDDLMLDVDLPEDAPLENVECDNMNRFDRTDRNVRQSQDGFWKRPPQRWSGQDHYHLSHPGHYHHHGQSDLSRGSPYRESPLGHFESYGGTPFFQAQKMFVDVPDNTVILDEMTLRHMVQDCTAVKTQLLKLKRLLHQHDGSGSLHDVQLSLPSSPEPEDGDQIYKNEDLLNEITQLKEEIKKKDEKIQLLEQQLATRCNCQQKSKEEKCTYADKYTQTPWRRIPGGYCAPSFSPWQGSFQGMPRTVPPHRRQTSSTTAFQQPSQIYRPRPGKTNKATTYRGPQ", "length": 833 }, "evidence": [ { "id": "A0A287B4Q0", "url": "https://omabrowser.org/oma/group/A0A287B4Q0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H7U1-1", "protein_name": "Serine-rich coiled-coil domain-containing protein 2", "gene_name": "CCSER2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEKTQIKTFLGSKLPKYGTKSVRSTLQPMPNGTPVNLLGTSKNSNVKSYIKNNGSDCPSSHSFNWRKANKYQLCAQGVEEPNNTQNSHDKIIDPEKRVPTQGMFDKNGIKGGLKSVSLFTSKLAKPSTMFVSSTEELNQKSFSGPSNLGKFTKGTLLGRTSYSSINTPKSQLNGFYGNRSAGSMQRPRANSCATRSSSGESLAQSPDSSKSINCEKMVRSQSFSHSIQNSFLPPSSITRSHSFNRAVDLTKPYQNQQLSIRVPLRSSMLTRNSRQPEVLNGNEHLGYGFNRPYAAGGKKLALPNGPGVTSTLGYRMVHPSLLKSSRSPFSGTMTVDGNKNSPADTCVEEDATVLAKDRAANKDQELIENESYRTKNNQTMKHDAKMRYLSDDVDDISLSSLSSSDKNDLSEDFSDDFIDIEDSNRTRITPEEMSLKEEKHENGPPQDMFDSPKENEKAFSKTDEWIDISVSDRSECTKHTSGNNLVSPDTDYRAGSSFELSPSDSSDGTYMWDEEGLEPIGNVHPVGSYESSEMNSIDILNNLESCDLEDDDLMLDVDLPEDAPLENVECDNMNRFDRPDRNVRQPQEGFWKRPPQRWSGQEHYHLSHPDHYHHHGKSDLSRGSPYRESPLGHFESYGGMPFFQAQKMFVDVPENTVILDEMTLRHMVQDCTAVKTQLLKLKRLLHQHDGSGSLHDIQLSLPSSPEPEDGDKVYKNEDLLNEIKQLKDEIKKKDEKIQLLELQLATQHICHQKCKEEKCTYADKYTQTPWRRIPGGYSAPSFSPWQGSFQGIPRTVPPHRRQTSSTTAFQQPSQTHRSHPGKTNKATTYRGPQ", "length": 834 }, "evidence": [ { "id": "A0A287B4Q0", "url": "https://omabrowser.org/oma/group/A0A287B4Q0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4Q0", "url": "https://www.uniprot.org/uniprotkb/A0A287B4Q0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "microtubule cytoskeleton", "id": "GO:0015630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015630", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4Q0", "url": "https://www.uniprot.org/uniprotkb/A0A287B4Q0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "microtubule bundle formation", "id": "GO:0001578", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001578", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4Q0", "url": "https://www.uniprot.org/uniprotkb/A0A287B4Q0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 179, "end_pos": 181, "annotation": "n_glycosylation_sequon" }, { "start_pos": 370, "end_pos": 372, "annotation": "n_glycosylation_sequon" }, { "start_pos": 425, "end_pos": 427, "annotation": "n_glycosylation_sequon" }, { "start_pos": 54, "end_pos": 56, "annotation": "n_glycosylation_sequon" }, { "start_pos": 83, "end_pos": 85, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 179, "end_pos": 181 }, { "start_pos": 370, "end_pos": 372 }, { "start_pos": 425, "end_pos": 427 }, { "start_pos": 54, "end_pos": 56 }, { "start_pos": 83, "end_pos": 85 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B794-1", "uniprot_ac": "A0A287B794", "uniprot_id": "A0A287B794_PIG", "mass": { "chemical_mass": 90892.0, "monoisotopic_mass": 90892.0 }, "refseq": { "ac": "XP_020924700", "name": "sarcolemmal membrane-associated protein isoform X25", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020924700" }, "gene_names": [ { "name": "SLMAP", "type": "recommended", "evidence": [ { "id": "A0A287B794", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B794" } ] }, { "name": "SLMAP", "type": "synonym", "evidence": [ { "id": "XP_020924700", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020924700" } ] } ], "protein_names": [ { "name": "Sarcolemmal membrane-associated protein", "type": "recommended", "evidence": [ { "id": "A0A287B794", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B794/entry#names_and_taxonomy" } ] }, { "name": "sarcolemmal membrane-associated protein isoform X25", "type": "synonym", "evidence": [ { "id": "XP_020924700", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020924700" } ] } ], "function": [ { "annotation": "Associates with the striatin-interacting phosphatase and kinase (STRIPAK) core complex, forming the extended (SIKE1:SLMAP)STRIPAK complex. The (SIKE1:SLMAP)STRIPAK complex dephosphorylates STK3 leading to the inhibition of Hippo signaling and the control of cell growth. May play a role during myoblast fusion.", "evidence": [ { "database": "UniProtKB", "id": "A0A287BQ55", "url": "https://www.uniprot.org/uniprotkb/A0A287BQ55#function" }, { "database": "UniProtKB", "id": "ARBA00057671", "url": "https://www.uniprot.org/uniprotkb/ARBA00057671#function" }, { "database": "UniProtKB", "id": "A0A287AKQ1", "url": "https://www.uniprot.org/uniprotkb/A0A287AKQ1#function" }, { "database": "UniProtKB", "id": "A0A287AYR9", "url": "https://www.uniprot.org/uniprotkb/A0A287AYR9#function" }, { "database": "UniProtKB", "id": "A0A287B3U0", "url": "https://www.uniprot.org/uniprotkb/A0A287B3U0#function" }, { "database": "UniProtKB", "id": "A0A287B6D7", "url": "https://www.uniprot.org/uniprotkb/A0A287B6D7#function" }, { "database": "UniProtKB", "id": "A0A287B794", "url": "https://www.uniprot.org/uniprotkb/A0A287B794#function" }, { "database": "UniProtKB", "id": "A0A8W4FA06", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FA06#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B794", "url": "https://www.uniprot.org/uniprotkb/A0A287B794" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SLMAP", "url": "https://www.uniprot.org/uniprotkb/A0A287B794", "locus": { "chromosome": "13", "start_pos": 39719923, "end_pos": 39571981, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000038873", "url": "https://www.ensembl.org/id/ENSSSCG00000038873" } ] } } ], "crossref": [ { "id": "A0A287B794", "url": "https://alphafold.ebi.ac.uk/entry/A0A287B794", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000038873", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000038873", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd21911", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd21911", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd22679", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22679", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100514321", "url": "https://www.ncbi.nlm.nih.gov/gene/100514321", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000253", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000253", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008984", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008984", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051176", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051176", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR060659", "url": "https://www.ebi.ac.uk/interpro/entry/IPR060659", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR15715", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15715", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15715:SF22", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15715:SF22", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00498", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00498", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF27557", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF27557", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF28341", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF28341", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020924700", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020924700", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AKQ1", "url": "https://www.uniprot.org/uniprotkb/A0A287AKQ1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AKQ1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AKQ1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AYR9", "url": "https://www.uniprot.org/uniprotkb/A0A287AYR9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AYR9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AYR9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B0G1", "url": "https://www.uniprot.org/uniprotkb/A0A287B0G1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B0G1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B0G1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B3U0", "url": "https://www.uniprot.org/uniprotkb/A0A287B3U0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B3U0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B3U0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6D7", "url": "https://www.uniprot.org/uniprotkb/A0A287B6D7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6D7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6D7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B794", "url": "https://www.uniprot.org/uniprotkb/A0A287B794", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B794-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B794-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BQ55", "url": "https://www.uniprot.org/uniprotkb/A0A287BQ55", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BQ55-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BQ55-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FA06", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FA06", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FA06-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FA06-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPSALAIFTCRPNSHPFQERHVYLDEPIKIGRSVARCRPAQNNATFDCKVLSRNHALVWFDHKTGKFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTENTRKVTHGCIVSTIKLFLPDGMEARLRSDVIHAPLPSPVDKVAANTPSMYSQELFQLSQYLQEALHREQMLEQKLATLQRLLAITQEASDTSWQALIDEDRLLSRLEVMGNQLQACSKNQTEDSLRKELIALQEDKHNYETTAKESLRRVLQEKIDVVRKLSEVERSLSNTEDECTHLKEMNERTQEELRELANKYNGAVNEIKDLSDKLKVAEGKQEEIQQKGQAEKKELQHKIDEMEEKEQELQAKIEALQADNDFTNERLTALQEKLIVEGHLTKVVEETKLSKENQARAKESDLSDTLSPSKEKSSDDTTDAQMDEQDLNEPLAKVSLLKDDLQGAQSEIEAKQEIQHLRKELIEAQELARASKQKCFELQALLEEERKAYRNQVEESNKQIQVLQAQLQRLHINIENLREEKDSEITSTRDELLSARDEILLLHQAAKKAASERDTDIASLQEELKKVRAELERWRKAASEYEKEITSLQNSFQLRCQQCEDQQREEATRLRGELEKLRKEWNVLETECRSLRKENVLLSSELQRQEKELHNSQKQSLELTSDLSILQMTRKELENQVGSLKEQHLRDSADLKTLLSKAENQAKDVQKEYEKTQTVLSELKLKFEMTEQEKQSITDELKQCKDNLKLLREKGNNKPWPWMPMLAALVAVTAIVLYVPGLARASP", "length": 790, "header": "tr|A0A287B794-1|A0A287B794_PIG Isoform 1 of Sarcolemmal membrane-associated protein OS=Sus scrofa OX=9823 GN=SLMAP PE=3 SV=3 CANONICAL=A0A287B794-1" }, "isoforms": [ { "isoform_ac": "A0A287AKQ1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AKQ1/entry", "sequence": { "sequence": "MPSALAIFTCRPNSHPFQERHVYLDEPIKIGRSVARCRPAQNNATFDCKVLSRNHALVWFDHKTGKFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTENTRKVTHGCIVSTIKLFLPDGMEARLRSDVIHAPLPSPVDKVAANTPSMYSQELFQLSQYLQEALHREQMLEQKLATLQRLLAITQEASDTSWQALIDEDRLLSRLEVMGNQLQACSKNQTEDSLRKELIALQEDKHNYETTAKESLRRVLQEKIDVVRKLSEVERSLSNTEDECTHLKEMNERTQEELRELANKYNGAVNEIKDLSDKLKVAEGKQEEIQQKGQAEKKELQHKIDEMEEKEQELQAKIEALQADNDFTNERLTALQGIQVDDFLPKINGSTEKEHLLSKSGGDCTFIHQFIECQKKLIVEGHLTKVVEETKLSKENQARAKESDLSDTLSPSKEKSSDDTTDAQMDEQDLNEPLAKVSLLKALLEEERKAYRNQVEESNKQIQVLQAQLQRLHINIENLREEKDSEITSTRDELLSARDEILLLHQAAKKAASERDTDIASLQEELKKVRAELERWRKAASEYEKEITSLQNSFQLRCQQCEDQQREEATRLRGELEKLRKEWNVLETECRSLRKENVLLSSELQRQEKELHNSQKQSLELTSDLSILQMTRKELENQVGSLKEQHLRDSADLKTLLSKAENQAKDVQKEYEKTQTVLSELKLKFEMTEQEKQSITDELKQCKDNLKLLREKGNNKPWPWMPMLAALVAVTAIVLYVPGLARASP", "length": 787, "header": "tr|A0A287AKQ1-1|A0A287B794_PIG Computationally mapped isoform of Sarcolemmal membrane-associated protein OS=Sus scrofa OX=9823 GN=SLMAP PE=3 SV=3 CANONICAL=A0A287B794-1" }, "locus": { "chromosome": "13", "start_pos": 39718134, "end_pos": 39573365, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043072.3", "url": "https://www.ensembl.org/id/ENSSSCT00000043072.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000044481.3", "url": "https://www.ensembl.org/id/ENSSSCP00000044481.3" } ] } }, { "isoform_ac": "A0A287AYR9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AYR9/entry", "sequence": { "sequence": "MPSALAIFTCRPNSHPFQERHVYLDEPIKIGRSVARCRPAQNNATFDCKVLSRNHALVWFDHKTGKFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTENTRKVTHGCIVSTIKLFLPDGMEARLRSDVIHAPLPSPVDKVAANTPSMYSQELFQLSQYLQEALHREQMLEQKLATLQRLLAITQEASDTSWQALIDEDRLLSRLEVMGNQLQACSKNQTEDSLRKELIALQEDKHNYETTAKESLRRVLQEKIDVVRKLSEVERSLSNTEDECTHLKEMNERTQEELRELANKYNGAVNEIKDLSDKLKVAEGKQEEIQQKGQAEKKELQHKIDEMEEKEQELQAKIEALQADNDFTNERLTALQVRLEHLQEKTLKECSSLEHLLSKSGGDCTFIHQFIECQKKLIVEGHLTKVVEETKLSKENQARAKESDLSDTLSPSKEKSSDDTTDAQMDEQDLNEPLAKVSLLKDDLQGAQSEIEAKQEIQHLRKELIEAQELARASKQKCFELQALLEEERKAYRNQVEESNKQIQVLQAQLQRLHINIENLREEKDSEITSTRDELLSARDEILLLHQAAKKAASERDTDIASLQEELKKVRAELERWRKAASEYEKEITSLQNSFQLRCQQCEDQQREEATRLRGELEKLRKEWNVLETECRSLRKENVLLSSELQRQEKELHNSQKQSLELTSDLSILQMTRKELENQVGSLKEQHLRDSADLKTLLSKAENQAKDVQKEYEKTQTVLSELKLKFEMTEQEKQSITDELKQCKDNLKLLREKGNNKPWPWMPMLAALVAVTAIVLYVPGLARASP", "length": 828, "header": "tr|A0A287AYR9-1|A0A287B794_PIG Computationally mapped isoform of Sarcolemmal membrane-associated protein OS=Sus scrofa OX=9823 GN=SLMAP PE=3 SV=2 CANONICAL=A0A287B794-1" }, "locus": { "chromosome": "13", "start_pos": 39718134, "end_pos": 39573365, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064853.3", "url": "https://www.ensembl.org/id/ENSSSCT00000064853.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049098.2", "url": "https://www.ensembl.org/id/ENSSSCP00000049098.2" } ] } }, { "isoform_ac": "A0A287B0G1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B0G1/entry", "sequence": { "sequence": "MEARLRSDVIHAPLPSPVDKVAANTPSMYSQELFQLSQYLQEALHREQMLEQKLATLQRLLAITQEASDTSWQALIDEDRLLSRLEVMGNQLQACSKNQTEDSLRKELIALQEDKHNYETTAKESLRRVLQEKIDVVRKLSEVERSLSNTEDECTHLKEMNERTQEELRELANKYNGAVNEIKDLSDKLKVAEGKQEEIQQKGQAEKKELQHKIDEMEEKEQELQAKIEALQADNDFTNERLTALQVRLEHLQEKTLKECSSLGIQVDDFLPKINGSTEKEHLLSKSGGDCTFIHQFIECQKKLIVEGHLTKVVEETKLSKENQARAKESDLSDTLSPSKEKSSDDTTDAQMDEQDLNEPLAKVSLLKDDLQGAQSEIEAKQEIQHLRKELIEAQELARASKQKCFELQALLEEERKAYRNQVEESNKQIQVLQAQLQRLHINIENLREEKDSEITSTRDELLSARDEILLLHQAAKKAASERDTDIASLQEELKKVRAELERWRKAASEYEKEITSLQNSFQLRCQQCEDQQREEATRLRGELEKLRKEWNVLETECRSLRKENVLLSSELQRQEKELHNSQKQSLELTSDLSILQMTRKELENQVGSLKEQHLRDSADLKTLLSKAENQAKDVQKEYEKTQTVLSELKLKFEMTEQEKQSITDELKQCKDNLKLLREKGNNPSILQPVPAVFIGLFLAFLFWCFGPLW", "length": 710, "header": "tr|A0A287B0G1-1|A0A287B794_PIG Computationally mapped isoform of Sarcolemmal membrane-associated protein OS=Sus scrofa OX=9823 GN=SLMAP PE=3 SV=2 CANONICAL=A0A287B794-1" }, "locus": { "chromosome": "13", "start_pos": 39716687, "end_pos": 39650234, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045871.3", "url": "https://www.ensembl.org/id/ENSSSCT00000045871.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049903.2", "url": "https://www.ensembl.org/id/ENSSSCP00000049903.2" } ] } }, { "isoform_ac": "A0A287B3U0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B3U0/entry", "sequence": { "sequence": "MPSALAIFTCRPNSHPFQERHVYLDEPIKIGRSVARCRPAQNNATFDCKVLSRNHALVWFDHKTGKFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTENTRKVTHGCIVSTIKLFLPDGMEARLRSDVIHAPLPSPVDKVAANTPSMYSQELFQLSQYLQEALHREQMLEQKLATLQRLLAITQEASDTSWQALIDEDRLLSRLEVMGNQLQACSKNQTEDSLRKELIALQEDKHNYETTAKESLRRVLQEKIDVVRKLSEVERSLSNTEDECTHLKEMNERTQEELRELANKYNGAVNEIKDLSDKLKVAEGKQEEIQQKGQAEKKELQHKIDEMEEKEQELQAKIEALQADNDFTNERLTALQEKLIVEGHLTKVVEETKLSKENQARAKESDLSDTLSPSKEKSSDDTTDAQMDEQDLNEPLAKVSLLKALLEEERKAYRNQVEESNKQIQVLQAQLQRLHINIENLREEKDSEITSTRDELLSARDEILLLHQAAKKAASERDTDIASLQEELKKVRAELERWRKAASEYEKEITSLQNSFQLRCQQCEDQQREEATRLRGELEKLRKEWNVLETECRSLRKENVLLSSELQRQEKELHNSQKQSLELTSDLSILQMTRKELENQVGSLKEQHLRDSADLKTLLSKAENQAKDVQKEYEKTQTVLSELKLKFEMTEQEKQSITDELKQCKDNLKLLREKGNNPSILQPVPAVFIGLFLAFLFWCFGPLW", "length": 746, "header": "tr|A0A287B3U0-1|A0A287B794_PIG Computationally mapped isoform of Sarcolemmal membrane-associated protein OS=Sus scrofa OX=9823 GN=SLMAP PE=3 SV=3 CANONICAL=A0A287B794-1" }, "locus": { "chromosome": "13", "start_pos": 39716687, "end_pos": 39573365, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052860.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052860.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051083.3", "url": "https://www.ensembl.org/id/ENSSSCP00000051083.3" } ] } }, { "isoform_ac": "A0A287B6D7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6D7/entry", "sequence": { "sequence": "MPSALAIFTCRPNSHPFQERHVYLDEPIKIGRSVARCRPAQNNATFDCKVLSRNHALVWFDHKTGKFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTENTRKVTHGCIVSTIKLFLPDGMEARLRSDVIHAPLPSPVDKVAANTPSMYSQELFQLSQYLQEALHREQMLEQKLATLQRLLAITQEASDTSWQALIDEDRLLSRLEVMGNQLQACSKNQTEDSLRKELIALQEDKHNYETTAKESLRRVLQEKIDVVRKLSEVERSLSNTEDECTHLKEMNERTQEELRELANKYNGAVNEIKDLSDKLKVAEGKQEEIQQKGQAEKKELQHKIDEMEEKEQELQAKIEALQADNDFTNERLTALQEHLLSKSGGDCTFIHQFIECQKKLIVEGHLTKVVEETKLSKENQARAKESDLSDTLSPSKEKSSDDTTDAQMDEQDLNEPLAKVSLLKDDLQGAQSEIEAKQEIQHLRKELIEAQELARASKQKCFELQALLEEERKAYRNQVEESNKQIQVLQAQLQRLHINIENLREEKDSEITSTRDELLSARDEILLLHQAAKKAASERDTDIASLQEELKKVRAELERWRKAASEYEKEITSLQNSFQLRCQQCEDQQREEATRLRGELEKLRKEWNVLETECRSLRKENVLLSSELQRQEKELHNSQKQSLELTSDLSILQMTRKELENQVGSLKEQHLRDSADLKTLLSKAENQAKDVQKEYEKTQTVLSELKLKFEMTEQEKQSITDELKQCKDNLKLLREKGNNKPWPWMPMLAALVAVTAIVLYVPGLARASP", "length": 811, "header": "tr|A0A287B6D7-1|A0A287B6D7_PIG Computationally mapped isoform of Sarcolemmal membrane-associated protein OS=Sus scrofa OX=9823 GN=SLMAP PE=3 SV=2 CANONICAL=A0A287B794-1" }, "locus": { "chromosome": "13", "start_pos": 39718134, "end_pos": 39573365, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052147.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052147.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051866.2", "url": "https://www.ensembl.org/id/ENSSSCP00000051866.2" } ] } }, { "isoform_ac": "A0A287B794-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B794/entry", "sequence": { "sequence": "MPSALAIFTCRPNSHPFQERHVYLDEPIKIGRSVARCRPAQNNATFDCKVLSRNHALVWFDHKTGKFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTENTRKVTHGCIVSTIKLFLPDGMEARLRSDVIHAPLPSPVDKVAANTPSMYSQELFQLSQYLQEALHREQMLEQKLATLQRLLAITQEASDTSWQALIDEDRLLSRLEVMGNQLQACSKNQTEDSLRKELIALQEDKHNYETTAKESLRRVLQEKIDVVRKLSEVERSLSNTEDECTHLKEMNERTQEELRELANKYNGAVNEIKDLSDKLKVAEGKQEEIQQKGQAEKKELQHKIDEMEEKEQELQAKIEALQADNDFTNERLTALQEKLIVEGHLTKVVEETKLSKENQARAKESDLSDTLSPSKEKSSDDTTDAQMDEQDLNEPLAKVSLLKDDLQGAQSEIEAKQEIQHLRKELIEAQELARASKQKCFELQALLEEERKAYRNQVEESNKQIQVLQAQLQRLHINIENLREEKDSEITSTRDELLSARDEILLLHQAAKKAASERDTDIASLQEELKKVRAELERWRKAASEYEKEITSLQNSFQLRCQQCEDQQREEATRLRGELEKLRKEWNVLETECRSLRKENVLLSSELQRQEKELHNSQKQSLELTSDLSILQMTRKELENQVGSLKEQHLRDSADLKTLLSKAENQAKDVQKEYEKTQTVLSELKLKFEMTEQEKQSITDELKQCKDNLKLLREKGNNKPWPWMPMLAALVAVTAIVLYVPGLARASP", "length": 790, "header": "tr|A0A287B794-1|A0A287B794_PIG Isoform 1 of Sarcolemmal membrane-associated protein OS=Sus scrofa OX=9823 GN=SLMAP PE=3 SV=3 CANONICAL=A0A287B794-1" }, "locus": { "chromosome": "13", "start_pos": 39718134, "end_pos": 39573365, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051827.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051827.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052175.3", "url": "https://www.ensembl.org/id/ENSSSCP00000052175.3" } ] } }, { "isoform_ac": "A0A287BQ55-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BQ55/entry", "sequence": { "sequence": "MPSALAIFTCRPNSHPFQERHVYLDEPIKIGRSVARCRPAQNNATFDCKVLSRNHALVWFDHKTGKFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTENTRKVTHGCIVSTIKLFLPDGMEARLRSDVIHAPLPSPVDKVAANTPSMYSQELFQLSQYLQEALHREQMLEQKLATLQRLLAITQEASDTSWQALIDEDRLLSRLEVMGNQLQACSKNQTEDSLRKELIALQEDKHNYETTAKESLRRVLQEKIDVVRKLSEVERSLSNTEDECTHLKEMNERTQEELRELANKYNGAVNEIKDLSDKLKVAEGKQEEIQQKGQAEKKELQHKIDEMEEKEQELQAKIEALQADNDFTNERLTALQVRLEHLQEKTLKECSSLGIQVDDFLPKINGSTEKEHLLSKSGGDCTFIHQFIECQKKLIVEGHLTKVVEETKLSKENQARAKESDLSDTLSPSKEKSSDDTTDAQMDEQDLNEPLAKVSLLKDDLQGAQSEIEAKQEIQHLRKELIEAQELARASKQKCFELQALLEEERKAYRNQVEESNKQIQVLQAQLQRLHINIENLREEKDSEITSTRDELLSARDEILLLHQAAKKAASERDTDIASLQEELKKVRAELERWRKAASEYEKEITSLQNSFQLRCQQCEDQQREEATRLRGELEKLRKEWNVLETECRSLRKENVLLSSELQRQEKELHNSQKQSLELTSDLSILQMTRKELENQVGSLKEQHLRDSADLKTLLSKAENQAKDVQKEYEKTQTVLSELKLKFEMTEQEKQSITDELKQCKDNLKLLREKGNNPSILQPVPAVFIGLFLAFLFWCFGPLW", "length": 842, "header": "tr|A0A287BQ55-1|A0A287B794_PIG Computationally mapped isoform of Sarcolemmal membrane-associated protein OS=Sus scrofa OX=9823 GN=SLMAP PE=3 SV=2 CANONICAL=A0A287B794-1" }, "locus": { "chromosome": "13", "start_pos": 39716687, "end_pos": 39573365, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037792.2", "url": "https://www.ensembl.org/id/ENSSSCT00000037792.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058642.2", "url": "https://www.ensembl.org/id/ENSSSCP00000058642.2" } ] } }, { "isoform_ac": "A0A8W4FA06-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FA06/entry", "sequence": { "sequence": "MPSALAIFTCRPNSHPFQERHVYLDEPIKIGRSVARCRPAQNNATFDCKVLSRNHALVWFDHKTGKFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTENTRKVTHGCIVSTIKLFLPDGMEARLRSDVIHAPLPSPVDKVAANTPSMYSQELFQLSQYLQEALHREQMLEQKLATLQRLLAITQEASDTSWQALIDEDRLLSRLEVMGNQLQACSKNQTEDSLRKELIALQEDKHNYETTAKESLRRVLQEKIDVVRKLSEVERSLSNTEDECTHLKEMNERTQEELRELANKYNGAVNEIKDLSDKLKVAEGKQEEIQQKGQAEKKELQHKIDEMEEKEQELQAKIEALQADNDFTNERLTALQVRLEHLQEKTLKECSSLGIQVDDFLPKINGSTEKEKLIVEGHLTKVVEETKLSKENQARAKESDLSDTLSPSKEKSSDDTTDAQMDEQDLNEPLAKVSLLKDDLQGAQSEIEAKQEIQHLRKELIEAQELARASKQKCFELQALLEEERKAYRNQVEESNKQIQVLQAQLQRLHINIENLREEKDSEITSTRDELLSARDEILLLHQAAKKAASERDTDIASLQEELKKVRAELERWRKAASEYEKEITSLQNSFQLRCQQCEDQQREEATRLRGELEKLRKEWNVLETECRSLRKENVLLSSELQRQEKELHNSQKQSLELTSDLSILQMTRKELENQVGSLKEQHLRDSADLKTLLSNKVDTGNISS", "length": 747, "header": "tr|A0A8W4FA06-1|A0A287B794_PIG Computationally mapped isoform of Sarcolemmal membrane-associated protein OS=Sus scrofa OX=9823 GN=SLMAP PE=3 SV=1 CANONICAL=A0A287B794-1" }, "locus": { "chromosome": "13", "start_pos": 39710264, "end_pos": 39573365, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000099123.1", "url": "https://www.ensembl.org/id/ENSSSCT00000099123.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076111.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076111.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FA06", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FA06" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "centrosome", "id": "GO:0005813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005813", "evidence": [ { "database": "UniProtKB", "id": "A0A287B794", "url": "https://www.uniprot.org/uniprotkb/A0A287B794" } ], "pmid": "" }, { "name": "mitochondrial membrane", "id": "GO:0031966", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031966", "evidence": [ { "database": "UniProtKB", "id": "A0A287B794", "url": "https://www.uniprot.org/uniprotkb/A0A287B794" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "A0A287B794", "url": "https://www.uniprot.org/uniprotkb/A0A287B794" } ], "pmid": "" }, { "name": "sarcolemma", "id": "GO:0042383", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042383", "evidence": [ { "database": "UniProtKB", "id": "A0A287B794", "url": "https://www.uniprot.org/uniprotkb/A0A287B794" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "regulation of membrane depolarization during cardiac muscle cell action potential", "id": "GO:1900825", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900825", "evidence": [ { "database": "UniProtKB", "id": "A0A287B794", "url": "https://www.uniprot.org/uniprotkb/A0A287B794" } ], "pmid": "" }, { "name": "negative regulation of hippo signaling", "id": "GO:0035331", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035331", "evidence": [ { "database": "UniProtKB", "id": "A0A287B794", "url": "https://www.uniprot.org/uniprotkb/A0A287B794" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 230, "end_pos": 232, "annotation": "n_glycosylation_sequon" }, { "start_pos": 43, "end_pos": 45, "annotation": "n_glycosylation_sequon" }, { "start_pos": 76, "end_pos": 78, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287B794-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 790, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287B794-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287B794" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287B794", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B794" }, { "id": "PS50006", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50006" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "FHA", "eco_id": "ECO_0000259", "start_pos": 28, "end_pos": 85, "start_aa": "Ile", "end_aa": "Leu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 230, "end_pos": 232 }, { "start_pos": 43, "end_pos": 45 }, { "start_pos": 76, "end_pos": 78 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B7U5-1", "uniprot_ac": "A0A287B7U5", "uniprot_id": "A0A287B7U5_PIG", "mass": { "chemical_mass": 248023.0, "monoisotopic_mass": 248023.0 }, "refseq": {}, "gene_names": [ { "name": "CLIP1", "type": "recommended", "evidence": [ { "id": "A0A287B7U5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B7U5" } ] } ], "protein_names": [ { "name": "CAP-Gly domain containing linker protein 1", "type": "synonym", "evidence": [ { "id": "A0A287B7U5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B7U5/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B7U5", "url": "https://www.uniprot.org/uniprotkb/A0A287B7U5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CLIP1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7U5", "locus": { "chromosome": "14", "start_pos": 30467657, "end_pos": 30320958, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000009793", "url": "https://www.ensembl.org/id/ENSSSCG00000009793" } ] } } ], "crossref": [ { "id": "A0A287B7U5", "url": "https://alphafold.ebi.ac.uk/entry/A0A287B7U5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000009793", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000009793", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR000938", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000938", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032108", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032108", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036859", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036859", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR18916", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR18916", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR18916:SF44", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR18916:SF44", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01302", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01302", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16641", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16641", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF27241", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF27241", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-141430", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-141430", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-141444", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-141444", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-2467813", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2467813", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-2500257", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2500257", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-5626467", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5626467", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-5663220", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5663220", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-68877", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-68877", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9648025", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9648025", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287AF75", "url": "https://www.uniprot.org/uniprotkb/A0A287AF75", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AF75-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AF75-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B5N9", "url": "https://www.uniprot.org/uniprotkb/A0A287B5N9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B5N9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B5N9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B7U5", "url": "https://www.uniprot.org/uniprotkb/A0A287B7U5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B7U5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7U5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1REW5", "url": "https://www.uniprot.org/uniprotkb/F1REW5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1REW5-1", "url": "https://www.uniprot.org/uniprotkb/F1REW5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSMLKPSGLKAPTKILKPGSTALKTPAVVVPIEKTISSDKASSTPSSEAQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTRPSKLTRKVQAEDEADGLQTTQASRATSPLSTSAASMVSSPPATSSNIPHKSSQPTAKEPSATSQISNLTKTASESISNLSEAGSIKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTTPAKAKAAAVRRVMATTPASLKRSPSASSLSSMSSVASSVSSKPSRTGLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISEDPENTQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKDLALRVQEVTELRRRLESSKPAGDVDMSLSLLQEISSLQEKLEATHTDHQKEMASLKEHFGAREETHQKEIKALQAATEKLSKENESLKGKLDHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGVGTETAELAELKTQIEKMRLDYQHEIESLQNKQDSERSAHTKELEALRAKLMKVIKEKENSLEAIKSKLDRVEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKCKEQTKVIDNFTSQLKAAEEKLSDLDALRKASSEGKSEIENLRQQLEAAEKQIKNLEIEKNAESGKASSITKELQGKELMLNNLQENLSEVSQVKEALEKELQILKEKFADASEEAVSVQRSMQETVNQLHQKEEQFNALSSELEKLRENLTDMEAKFRERDEREEQLIKAKEKLENDIAEIMKMSGDHSSQLTKMNDELRLKERNVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQEAAKKHEEEKKELLQKLSDLEKKMEMSHNECQDLKARYEEASSEAKAKHEEVLQNLQKTLLDTEERLKAAQEENSDLLQEMEELEKQAGKARSLTYLLTSAKKEIELISEELRGLKSEKQLLAQEGNALKLEKGSLLSKLLEVEAKITLLQEDQQKLWSVNETLNLERQKAVEEKQDVEKLYQQEQLEKAALAVEREKLLKEINIAQEELLKINVENDSLQASKASLQALTEEFQMSRDMLIAESKKNREEKDHLGDHIKKLVTENLALAKDKDEIIQKLKSSYEELVKDQKTLVQEIEDLTTEKKSVLEKQSSLENVCIALKVERDHLLQNSKDLQLEKDMLLQGQEKLNTSLEGALQVKHLLSAEASGLRAQLDEASRALRKAELETLQLQATNTNLSKLLEEIKTSREITDSECIQLLHEKETLASSERRLLAEKEELLTENRLITEKFNKCSEEAAHIEMSLNEKISYLTSEKELVCQKITKLKKQHDSLLKEKSVLEMQNGDLLAERENSIKAIGDLKKKYDQESTNRRIIVHEKMKLLGNLDALKKELQERKKENQELAATKCDLSLMLKEAQNARKTLEKEHTNTLQAKESLHTELKACSSEKNILLRDRLNLQEECQKLNEKMQTMQQSLLLEKEARTQDKDSSLYENNKLHGRLALLEQEMEELRACSKELQSENVVLIQDKTKSEQKVVEILKEKELLSAEAARLAAKIETLKSDFAALSKSKLELQELHSYLTKMLDDLRLSHEVTLAEQAKAVQDNKNLLAEKREMMLKKEELLKEKEKLAESYFILQKEISQLAKTNSHISANLLESQNENRILRKDKSKLTLKIRELETLHSFTAAQTAEDAMQIMEQMTKEKTETLASLEDSKQTNEKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKVSGPWVGILSSAMLSIAAESKLIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLHSVVQSLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQAEEDERAQESQIDFLNSVIVDLQRKNQDLKMKVEMMSEAALNGNGDDLNSYDSDDQEKQSKKKPRLFCDICDCFDLHDTEDCPTQAQMSEDPPHSTHHGSRSEERPYCEICEMFGHWATNCNDDETF", "length": 2193, "header": "tr|A0A287B7U5-1|A0A287B7U5_PIG Isoform 1 of CAP-Gly domain containing linker protein 1 OS=Sus scrofa OX=9823 GN=CLIP1 PE=1 SV=3 CANONICAL=A0A287B7U5-1" }, "isoforms": [ { "isoform_ac": "A0A287AF75-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AF75/entry", "sequence": { "sequence": "MSMLKPSGLKAPTKILKPGSTALKTPAVVVPIEKTISSDKASSTPSSEAQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTRPSKLTRKVQAEDEADGLQTTQASRATSPLSTSAASMVSSPPATSSNIPHKSSQPTAKEPSATSQISNLTKTASESISNLSEAGSIKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTTPAKAKAAAVRRVMATTPASLKRSPSASSLSSMSSVASSVSSKPSRTGLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISEDPENVATVSEKSRIMELEKDLALRVQEVTELRRRLESSKPAGDVDMSLSLLQEISSLQEKLEATHTDHQKEMASLKEHFGAREETHQKEIKALQAATEKLSKENESLKGKLDHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGVGTETAELAELKTQIEKMRLDYQHEIESLQNKQDSERSAHTKELEALRAKLMKVIKEKENSLEAIKSKLDRVEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKCKEQTKVIDNFTSQLKAAEEKLSDLDALRKASSEGKSEIENLRQQLEAAEKQIKNLEIEKNAESGKASSITKELQGKELMLNNLQENLSEVSQVKEALEKELQILKEKFADASEEAVSVQRSMQETVNQLHQKEEQFNALSSELEKLRENLTDMEAKFRERDEREEQLIKAKEKLENDIAEIMKMSGDHSSQLTKMNDELRLKERNVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQEAAKKHEEEKKELLQKLSDLEKKMEMSHNECQDLKARYEEASSEAKAKHEEVLQNLQKTLLDTEERLKAAQEENSDLLQEMEELEKQAGKARAAQTAEDAMQIMEQMTKEKTETLASLEDSKQTNEKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKVSGPWVGILSSAMLSIAAESKLIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLHSVVQSLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQAEEDERAQESQIDFLNSVIVDLQRKNQDLKMKVEMMSEAALNGNGDDLNSYDSDDQEKQSKKKPRLFCDICDCFDLHDTEDCPTQAQMSEDPPHSTHHGSRSEERPYCEICEMFGHWATNCNDDETF", "length": 1402, "header": "tr|A0A287AF75-1|A0A287B7U5_PIG Computationally mapped isoform of CAP-Gly domain containing linker protein 1 OS=Sus scrofa OX=9823 GN=CLIP1 PE=1 SV=1 CANONICAL=A0A287B7U5-1" }, "locus": { "chromosome": "14", "start_pos": 30465623, "end_pos": 30369344, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059890.3", "url": "https://www.ensembl.org/id/ENSSSCT00000059890.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000042678.3", "url": "https://www.ensembl.org/id/ENSSSCP00000042678.3" } ] } }, { "isoform_ac": "A0A287B5N9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B5N9/entry", "sequence": { "sequence": "MSMLKPSGLKAPTKILKPGSTALKTPAVVVPIEKTISSDKASSTPSSEAQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTRPSKLTRKVQAEDEADGLQTTQASRATSPLSTSAASMVSSPPATSSNIPHKSSQPTAKEPSATSQISNLTKTASESISNLSEAGSIKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTTPAKAKAAAVRRVMATTPASLKRSPSASSLSSMSSVASSVSSKPSRTGLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISEDPENTQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKDLALRVQEVTELRRRLESSKPAGDVDMSLSLLQEISSLQEKLEATHTDHQKEMASLKEHFGAREETHQKEIKALQAATEKLSKENESLKGKLDHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGVGTETAELAELKTQIEKMRLDYQHEIESLQNKQDSERSAHTKELEALRAKLMKVIKEKENSLEAIKSKLDRVEDQHLVEMEDTLNKLQEAEIKKEKFADASEEAVSVQRSMQETVNQLHQKEEQFNALSSELEKLRENLTDMEAKFRERDEREEQLIKAKEKLENDIAEIMKMSGDHSSQLTKMNDELRLKERNVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQEAAKKHEEEKKELLQKLSDLEKKMEMSHNECQDLKARYEEASSEAKAKHEEVLQNLQKTLLDTEERLKAAQEENSDLLQEMEELEKQAGKARAAQTAEDAMQIMEQMTKEKTETLASLEDSKQTNEKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKVSGPWVGILSSAMLLPSNTLRESKLIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLHSVVQSLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQAEEDERAQESQVIFLPFALLT", "length": 1219, "header": "tr|A0A287B5N9-1|A0A287B5N9_PIG Computationally mapped isoform of CAP-Gly domain containing linker protein 1 OS=Sus scrofa OX=9823 GN=CLIP1 PE=1 SV=1 CANONICAL=A0A287B7U5-1" }, "locus": { "chromosome": "14", "start_pos": 30461613, "end_pos": 30369344, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047921.2", "url": "https://www.ensembl.org/id/ENSSSCT00000047921.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051610.2", "url": "https://www.ensembl.org/id/ENSSSCP00000051610.2" } ] } }, { "isoform_ac": "A0A287B7U5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7U5/entry", "sequence": { "sequence": "MSMLKPSGLKAPTKILKPGSTALKTPAVVVPIEKTISSDKASSTPSSEAQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTRPSKLTRKVQAEDEADGLQTTQASRATSPLSTSAASMVSSPPATSSNIPHKSSQPTAKEPSATSQISNLTKTASESISNLSEAGSIKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTTPAKAKAAAVRRVMATTPASLKRSPSASSLSSMSSVASSVSSKPSRTGLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISEDPENTQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKDLALRVQEVTELRRRLESSKPAGDVDMSLSLLQEISSLQEKLEATHTDHQKEMASLKEHFGAREETHQKEIKALQAATEKLSKENESLKGKLDHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGVGTETAELAELKTQIEKMRLDYQHEIESLQNKQDSERSAHTKELEALRAKLMKVIKEKENSLEAIKSKLDRVEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKCKEQTKVIDNFTSQLKAAEEKLSDLDALRKASSEGKSEIENLRQQLEAAEKQIKNLEIEKNAESGKASSITKELQGKELMLNNLQENLSEVSQVKEALEKELQILKEKFADASEEAVSVQRSMQETVNQLHQKEEQFNALSSELEKLRENLTDMEAKFRERDEREEQLIKAKEKLENDIAEIMKMSGDHSSQLTKMNDELRLKERNVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQEAAKKHEEEKKELLQKLSDLEKKMEMSHNECQDLKARYEEASSEAKAKHEEVLQNLQKTLLDTEERLKAAQEENSDLLQEMEELEKQAGKARSLTYLLTSAKKEIELISEELRGLKSEKQLLAQEGNALKLEKGSLLSKLLEVEAKITLLQEDQQKLWSVNETLNLERQKAVEEKQDVEKLYQQEQLEKAALAVEREKLLKEINIAQEELLKINVENDSLQASKASLQALTEEFQMSRDMLIAESKKNREEKDHLGDHIKKLVTENLALAKDKDEIIQKLKSSYEELVKDQKTLVQEIEDLTTEKKSVLEKQSSLENVCIALKVERDHLLQNSKDLQLEKDMLLQGQEKLNTSLEGALQVKHLLSAEASGLRAQLDEASRALRKAELETLQLQATNTNLSKLLEEIKTSREITDSECIQLLHEKETLASSERRLLAEKEELLTENRLITEKFNKCSEEAAHIEMSLNEKISYLTSEKELVCQKITKLKKQHDSLLKEKSVLEMQNGDLLAERENSIKAIGDLKKKYDQESTNRRIIVHEKMKLLGNLDALKKELQERKKENQELAATKCDLSLMLKEAQNARKTLEKEHTNTLQAKESLHTELKACSSEKNILLRDRLNLQEECQKLNEKMQTMQQSLLLEKEARTQDKDSSLYENNKLHGRLALLEQEMEELRACSKELQSENVVLIQDKTKSEQKVVEILKEKELLSAEAARLAAKIETLKSDFAALSKSKLELQELHSYLTKMLDDLRLSHEVTLAEQAKAVQDNKNLLAEKREMMLKKEELLKEKEKLAESYFILQKEISQLAKTNSHISANLLESQNENRILRKDKSKLTLKIRELETLHSFTAAQTAEDAMQIMEQMTKEKTETLASLEDSKQTNEKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKVSGPWVGILSSAMLSIAAESKLIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLHSVVQSLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQAEEDERAQESQIDFLNSVIVDLQRKNQDLKMKVEMMSEAALNGNGDDLNSYDSDDQEKQSKKKPRLFCDICDCFDLHDTEDCPTQAQMSEDPPHSTHHGSRSEERPYCEICEMFGHWATNCNDDETF", 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"https://www.uniprot.org/uniprotkb/F1REW5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-141430", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-141430", "resource": "Reactome", "description": "Inactivation of APC/C via direct inhibition of the APC/C complex" }, { "id": "R-SSC-141444", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-141444", "resource": "Reactome", "description": "Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal" }, { "id": "R-SSC-2467813", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2467813", "resource": "Reactome", "description": "Separation of Sister Chromatids" }, { "id": "R-SSC-2500257", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2500257", "resource": "Reactome", "description": "Resolution of Sister Chromatid Cohesion" }, { "id": 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"table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B9Y9-1", "uniprot_ac": "A0A287B9Y9", "uniprot_id": "A0A287B9Y9_PIG", "mass": { "chemical_mass": 113553.0, "monoisotopic_mass": 113553.0 }, "refseq": { "ac": "XP_005668544", "name": "RNA-binding protein 26 isoform X7", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005668544" }, "gene_names": [ { "name": "RBM26", "type": "recommended", "evidence": [ { "id": "A0A287B9Y9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B9Y9" } ] }, { "name": "RBM26", "type": "synonym", "evidence": [ { "id": "XP_005668544", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005668544" } ] } ], "protein_names": [ { "name": "RNA-binding protein 26", "type": "recommended", "evidence": [ { "id": "A0A287B9Y9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B9Y9/entry#names_and_taxonomy" } ] }, { "name": "RNA-binding motif protein 26", "type": "synonym", "evidence": [ { "id": "A0A287B9Y9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B9Y9/entry#names_and_taxonomy" } ] }, { "name": "RNA-binding protein 26 isoform X7", "type": "synonym", "evidence": [ { "id": "XP_005668544", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005668544" } ] } ], "function": [ { "annotation": "May be involved in the turnover of nuclear polyadenylated (pA+) RNA.", "evidence": [ { "database": "UniProtKB", "id": "I3LPL2", "url": "https://www.uniprot.org/uniprotkb/I3LPL2#function" }, { "database": "UniProtKB", "id": "ARBA00043866", "url": "https://www.uniprot.org/uniprotkb/ARBA00043866#function" }, { "database": "UniProtKB", "id": "A0A287B9Y9", "url": "https://www.uniprot.org/uniprotkb/A0A287B9Y9#function" }, { "database": "UniProtKB", "id": "F1RP70", "url": "https://www.uniprot.org/uniprotkb/F1RP70#function" }, { "database": "UniProtKB", "id": "A0A287AME0", "url": "https://www.uniprot.org/uniprotkb/A0A287AME0#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B9Y9", "url": "https://www.uniprot.org/uniprotkb/A0A287B9Y9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RBM26", "url": "https://www.uniprot.org/uniprotkb/A0A287B9Y9", "locus": { "chromosome": "11", "start_pos": 51339629, "end_pos": 51420512, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000009479", "url": "https://www.ensembl.org/id/ENSSSCG00000009479" } ] } } ], "crossref": [ { "id": "ENSSSCG00000009479", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000009479", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd12258", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd12258", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd12516", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd12516", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100153235", "url": "https://www.ncbi.nlm.nih.gov/gene/100153235", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000504", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000504", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000571", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000571", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002483", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002483", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012677", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012677", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR034859", "url": "https://www.ebi.ac.uk/interpro/entry/IPR034859", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035979", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035979", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039511", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039511", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045137", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045137", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "A0A287B9Y9", "url": "https://www.orthodb.org/?gene=A0A287B9Y9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14398", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14398", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14398:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14398:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01480", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01480", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-9930044", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9930044", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_005668544", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005668544", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZUX8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZUX8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZUX8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZUX8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AME0", "url": "https://www.uniprot.org/uniprotkb/A0A287AME0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AME0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AME0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9Y9", "url": "https://www.uniprot.org/uniprotkb/A0A287B9Y9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9Y9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9Y9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RP70", "url": "https://www.uniprot.org/uniprotkb/F1RP70", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RP70-1", "url": "https://www.uniprot.org/uniprotkb/F1RP70-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LPL2", "url": "https://www.uniprot.org/uniprotkb/I3LPL2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LPL2-1", "url": "https://www.uniprot.org/uniprotkb/I3LPL2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVSKMIIENFEALKSWLSKTLEPICDADPSALAKYVLALVKKDKSEKELKALCIDQLDVFLQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFQHQDKDIKKEEITKEEEREKKFSRRLNHSPPQSSSRYRENRSRDERKKDDRSRKRDYDRNPPRRDSYRDRYNRRRGRSRSYSRSRSRSWSKERLRDRDRDRSRTRSRSRTRSRERDLVKPKYDLDRADPLENNYTPVSSVPNISSGHYPVPTLSSTITVIAPTHHGNNTTESWSEFHEDQVDHNSYVRPPMPKKRCRDYDEKGFCMRGDMCPFDHGSDPVVVEDVNLPGMLPFPAQPPVVEGPPPPGLPPPPPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPPLPPLQPSGMDAPPNSATSSVPTVVTTGIHHQPPPAPPSLFTADTYDTDGYNPEAPSITNTSRPMYRHRVHAQRPNLIGLTSGDMDLPPREKPPNKSSMRIVVDSESRKRTIGSGEPGVPTKKTWFDKPNFNRTNSPGFQKKVQFGNENTKLELRKVPPELNNISKLNEHFSRFGTLVNLQVAYNGDPEGALIQFATYEEAKKAISSTEAVLNNRFIKVYWHREGSTQQLQTTSPKVMQPLVQQPILPVVKQSVKERLGPVPSSTIEPAEAQSASSDLPQNVTKLSVKDRLGFVSKPSVSATEKVLSTSTGLTKTVYNPAALKAAQKTLLVSTSAVDNNEAQKKKQEALKLQQDVRKRKQEILEKHIETQKMLISKLEKNKAMKSEDKAEIMKTLEVLTKNITKLKDEVKAASPGRCLPKSIKTKTQMQKELLDTELDLYKKMQAGEEVTELRRKYTELQLEAAKRGILSSGRGRGIHSRGRGAAHGRGRGRGRGRGVPGHAVVDHRPRALEISAFTESDREDLLPHFAQYGEIEDCQIDDSSLHAVITFKTRAEAEAAAVHGARFKGQDLKLAWNKPITNISAVETEEVEPDEEEFQEESLVDDSLLQDDDEEEEDNESRSWRR", "length": 1007, "header": "tr|A0A287B9Y9-1|A0A287B9Y9_PIG Isoform 1 of RNA-binding protein 26 OS=Sus scrofa OX=9823 GN=RBM26 PE=1 SV=3 CANONICAL=A0A287B9Y9-1" }, "isoforms": [ { "isoform_ac": "A0A286ZUX8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZUX8/entry", "sequence": { "sequence": "MITLLSMSQMLVTYNSDYHIDCDADPSALAKYVLALVKKDKSEKELKALCIDQLDVFLQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFQHQDKDIKKEEITKEEEREKKFSRRLNHSPPQSSSRYRENRSRDERKKDDRSRKRDYDRNPPRRDSYRDRYNRRRGRSRSYSRSRSRSWSKERLRDRDRDRSRTRSRSRTRSRERDLVKPKYDLDRADPLENNYTPVSSVPNISSGHYPVPTLSSTITVIAPTHHGNNTTESWSEFHEDQVDHNSYVRPPMPKKRCRDYDEKGFCMRGDMCPFDHGSDPVVVEDVNLPGMLPFPAQPPVVEGPPPPGLPPPPPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPPLPPLQPSGMDAPPNSATSSVPTVVTTGIHHQPPPAPPSLFTADTYDTDGYNPEAPSITNTSRPMYRHRVHAQRPNLIGLTSGDMDLPPREKPPNKSSMRIVVDSESRKRTIGSGEPGVPTKKTWFDKPNFNRTNSPGFQKKVQFGNENTKLELRKVPPELNNISKLNEHFSRFGTLVNLQVAYNGDPEGALIQFATYEEAKKAISSTEAVLNNRFIKVYWHREGSTQQLQTTSPKVMQPLVQQPILPVVKQSVKERLGPVPSSTIEPAEAQSASSDLPQNVTKLSVKDRLGFVSKPSVSATEKVLSTSTGLTKTVYNPAALKAAQKTLLVSTSAVDNNEAQKKKQEALKLQQDVRKRKQEILEKHIETQKMLISKLEKNKAMKSEDKAEIMKTLEVLTKNITKLKDEVKAASPGRCLPKSIKTKTQMQKELLDTELDLYKKMQAGEEVTELRRKYTELQLEAAKRGILSSGRGRGIHSRGRGAAHGRGRGRGRGRGVPGHAVVDHRPRALEISAFTESDREDLLPHFAQYGEIEDCQIDDSSLHAVITFKTRAEAEAAAVHGARFKGQDLKLAWNKPITNISAVETEEVEPDEEEVCFFFPLFSLKCLHFYINCGIMTVILT", "length": 1002, "header": "tr|A0A286ZUX8-1|A0A287B9Y9_PIG Computationally mapped isoform of RNA-binding protein 26 OS=Sus scrofa OX=9823 GN=RBM26 PE=1 SV=3 CANONICAL=A0A287B9Y9-1" }, "locus": { "chromosome": "11", "start_pos": 51394521, "end_pos": 51347681, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064978.3", "url": "https://www.ensembl.org/id/ENSSSCT00000064978.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035409.3", "url": "https://www.ensembl.org/id/ENSSSCP00000035409.3" } ] } }, { "isoform_ac": "A0A287AME0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AME0/entry", "sequence": { "sequence": "MVSKMIIENFEALKSWLSKTLEPICDADPSALAKYVLALVKKDKSEKELKALCIDQLDVFLQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFQHQDKDIKKEEITKEEEREKKFSRRLNHSPPQSSSRYRENRSRDERKKDDRSRKRDYDRNPPRRDSYRDRYNRRRGRSRSYSRSRSRSWSKERLRDRDRDRSRTRSRSRTRSRERDLVKPKYDLDRADPLENNYTPVSSVPNISSGHYPVPTLSSTITVIAPTHHGNNTTESWSEFHEDQVDHNSYVRPPMPKKRCRDYDEKGFCMRGDMCPFDHGSDPVVVEDVNLPGMLPFPAQPPVVEGPPPPGLPPPPPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPPLPPLQPSGMDAPPNSATSSVPTVVTTGIHHQPPPAPPSLFTADTYDTDGYNPEAPSITNTSRPMYRHRVHAQRPNLIGLTSGDMDLPPREKPPNKSSMRIVVDSESRKRTIGSGEPGVPTKKTWFDKPNFNRTNSPGFQKKVQFGNENTKLELRKVPPELNNISKLNEHFSRFGTLVNLQVAYNGDPEGALIQFATYEEAKKAISSTEAVLNNRFIKVYWHREGSTQQLQTTSPKVMQPLVQQPILPVVKQSVKERLGPVPSSTIEPAEAQSASSDLPQVLSTSTGLTKTVYNPAALKAAQKTLLVSTSAVDNNEAQKKKQEALKLQQDVRKRKQEILEKHIETQKMLISKLEKNKAMKSEDKAEIMKTLEVLTKNITKLKDEVKAASPGRCLPKSIKTKTQMQKELLDTELDLYKKMQAGEEVTELRRKYTELQLEAAKRGILSSGRGRGIHSRGRGAAHGRGRGRGRGRGVPGHAVVDHRPRALEISAFTESDREDLLPHFAQYGEIEDCQIDDSSLHAVITFKTRAEAEAAAVHGARFKGQDLKLAWNKPITNISAVETEEVEPDEEEVCFFFPLFSLKCLHFYINCGIMTVILT", "length": 981, "header": "tr|A0A287AME0-1|A0A287B9Y9_PIG Computationally mapped isoform of RNA-binding protein 26 OS=Sus scrofa OX=9823 GN=RBM26 PE=1 SV=3 CANONICAL=A0A287B9Y9-1" }, "locus": { "chromosome": "11", "start_pos": 51420040, "end_pos": 51347681, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061236.3", "url": "https://www.ensembl.org/id/ENSSSCT00000061236.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045171.3", "url": "https://www.ensembl.org/id/ENSSSCP00000045171.3" } ] } }, { "isoform_ac": "A0A287B9Y9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9Y9/entry", "sequence": { "sequence": "MVSKMIIENFEALKSWLSKTLEPICDADPSALAKYVLALVKKDKSEKELKALCIDQLDVFLQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFQHQDKDIKKEEITKEEEREKKFSRRLNHSPPQSSSRYRENRSRDERKKDDRSRKRDYDRNPPRRDSYRDRYNRRRGRSRSYSRSRSRSWSKERLRDRDRDRSRTRSRSRTRSRERDLVKPKYDLDRADPLENNYTPVSSVPNISSGHYPVPTLSSTITVIAPTHHGNNTTESWSEFHEDQVDHNSYVRPPMPKKRCRDYDEKGFCMRGDMCPFDHGSDPVVVEDVNLPGMLPFPAQPPVVEGPPPPGLPPPPPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPPLPPLQPSGMDAPPNSATSSVPTVVTTGIHHQPPPAPPSLFTADTYDTDGYNPEAPSITNTSRPMYRHRVHAQRPNLIGLTSGDMDLPPREKPPNKSSMRIVVDSESRKRTIGSGEPGVPTKKTWFDKPNFNRTNSPGFQKKVQFGNENTKLELRKVPPELNNISKLNEHFSRFGTLVNLQVAYNGDPEGALIQFATYEEAKKAISSTEAVLNNRFIKVYWHREGSTQQLQTTSPKVMQPLVQQPILPVVKQSVKERLGPVPSSTIEPAEAQSASSDLPQNVTKLSVKDRLGFVSKPSVSATEKVLSTSTGLTKTVYNPAALKAAQKTLLVSTSAVDNNEAQKKKQEALKLQQDVRKRKQEILEKHIETQKMLISKLEKNKAMKSEDKAEIMKTLEVLTKNITKLKDEVKAASPGRCLPKSIKTKTQMQKELLDTELDLYKKMQAGEEVTELRRKYTELQLEAAKRGILSSGRGRGIHSRGRGAAHGRGRGRGRGRGVPGHAVVDHRPRALEISAFTESDREDLLPHFAQYGEIEDCQIDDSSLHAVITFKTRAEAEAAAVHGARFKGQDLKLAWNKPITNISAVETEEVEPDEEEFQEESLVDDSLLQDDDEEEEDNESRSWRR", "length": 1007, "header": "tr|A0A287B9Y9-1|A0A287B9Y9_PIG Isoform 1 of RNA-binding protein 26 OS=Sus scrofa OX=9823 GN=RBM26 PE=1 SV=3 CANONICAL=A0A287B9Y9-1" }, "locus": { "chromosome": "11", "start_pos": 51420040, "end_pos": 51346009, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064925.3", "url": "https://www.ensembl.org/id/ENSSSCT00000064925.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053314.3", "url": "https://www.ensembl.org/id/ENSSSCP00000053314.3" } ] } }, { "isoform_ac": "F1RP70-1", "url": "https://www.uniprot.org/uniprotkb/F1RP70/entry", "sequence": { "sequence": "MVSKMIIENFEALKSWLSKTLEPICDADPSALAKYVLALVKKDKSEKELKALCIDQLDVFLQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFQHQDKDIKKEEITKEEEREKKFSRRLNHSPPQSSSRYRENRSRDERKKDDRSRKRDYDRNPPRRDSYRDRYNRRRGRSRSYSRSRSRSWSKERLRDRDRDRSRTRSRSRTRSRERDLVKPKYDLDRADPLENNYTPVSSVPNISSGHYPVPTLSSTITVIAPTHHGNNTTESWSEFHEDQVDHNSYVRPPMPKKRCRDYDEKGFCMRGDMCPFDHGSDPVVVEDVNLPGMLPFPAQPPVVEGPPPPGLPPPPPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPPLPPLQPSGMDAPPNSATSSVPTVVTTGIHHQPPPAPPSLFTADTYDTDGYNPEAPSITNTSRPMYRHRVHAQRPNLIGLTSGDMDLPPREKPPNKSSMRIVVDSESRKRTIGSGEPGVPTKKTWFDKPNFNRTNSPGFQKKVQFGNENTKLELRKVPPELNNISKLNEHFSRFGTLVNLQVAYNGDPEGALIQFATYEEAKKAISSTEAVLNNRFIKVYWHREGSTQQLQTTSPKVMQPLVQQPILPVVKQSVKERLGPVPSSTIEPAEAQSASSDLPQNVTKLSVKDRLGFVSKPSVSATEKVLSTSTGLTKTVYNPAALKAAQKTLLVSTSAVDNNEAQKKKQEALKLQQDVRKRKQEILEKHIETQKMLISKLEKNKAMKSEDKAEIMKTLEVLTKNITKLKDEVKAASPGRCLPKSIKTKTQMQKELLDTELDLYKKMQAGEEVTELRRKYTELQLEAAKRGILSSGRGRGIHSRGRGAAHGRGRGRGRGRGVPGHAVVDHRPRALEISAFTESDREDLLPHFAQYGEIEDCQIDDSSLHAVITFKTRAEAEAAAVHGARFKGQDLKLAWNKPITNISAVETEEVEPDEEEREIIIA", "length": 984, "header": "tr|F1RP70-1|A0A287B9Y9_PIG Computationally mapped isoform of RNA-binding protein 26 OS=Sus scrofa OX=9823 GN=RBM26 PE=1 SV=4 CANONICAL=A0A287B9Y9-1" }, "locus": { "chromosome": "11", "start_pos": 51420040, "end_pos": 51340633, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000010394.5", "url": "https://www.ensembl.org/id/ENSSSCT00000010394.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000010124.4", "url": "https://www.ensembl.org/id/ENSSSCP00000010124.4" } ] } }, { "isoform_ac": "I3LPL2-1", "url": "https://www.uniprot.org/uniprotkb/I3LPL2/entry", "sequence": { "sequence": "MVSKMIIENFEALKSWLSKTLEPICDADPSALAKYVLALVKKDKSEKELKALCIDQLDVFLQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFQHQDKDIKKEEITKEEEREKKFSRRLNHSPPQSSSRYRENRSRDERKKDDRSRKRDYDRNPPRRDSYRDRYNRRRGRSRSYSRSRSRSWSKERLRDRDRDRSRTRSRSRTRSRERDLVKPKYDLDRADPLENNYTPVSSVPNISSGHYPVPTLSSTITVIAPTHHGNNTTESWSEFHEDQVDHNSYVRPPMPKKRCRDYDEKGFCMRGDMCPFDHGSDPVVVEDVNLPGMLPFPAQPPVVEGPPPPGLPPPPPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPPLPPLQPSGMDAPPNSATSSVPTVVTTGIHHQPPPAPPSLFTADTYDTDGYNPEAPSITNTSRPMYRHRVHAQRPNLIGLTSGDMDLPPREKPPNKSSMRIVVDSESRKRTIGSGEPGVPTKKTWFDKPNFNRTNSPGFQKKVQFGNENTKLELRKVPPELNNISKLNEHFSRFGTLVNLQVAYNGDPEGALIQFATYEEAKKAISSTEAVLNNRFIKVYWHREGSTQQLQTTSPKVMQPLVQQPILPVVKQSVKERLGPVPSSTIEPAEAQSASSDLPQNVTKLSVKDRLGFVSKPSVSATEKVLSTSTGLTKTVYNPAALKAAQKTLLVSTSAVDNNEAQKKKQEALKLQQDVRKRKQEILEKHIETQKMLISKLEKNKAMKSEDKAEIMKTLEVLTKNITKLKDEVKAASPGRCLPKSIKTKTQMQKELLDTELDLYKKMQAGEEVTELRRKYTELQLEAAKRGILSSGRGRGIHSRGRGAAHGRGRGRGRGRGVPGHAVVDHRPRALEISAFTESDREDLLPHFAQYGEIEDCQIDDSSLHAVITFKTRAEAEAAAVHGARFKGQDLKLAWNKPITNISAVETEEVEPDEEEVCFFFPLFSLKCLHFYINCGIMTVILT", "length": 1005, "header": "tr|I3LPL2-1|A0A287B9Y9_PIG Computationally mapped isoform of RNA-binding protein 26 OS=Sus scrofa OX=9823 GN=RBM26 PE=1 SV=3 CANONICAL=A0A287B9Y9-1" }, "locus": { "chromosome": "11", "start_pos": 51420040, "end_pos": 51347681, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028357.4", "url": "https://www.ensembl.org/id/ENSSSCT00000028357.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000026039.3", "url": "https://www.ensembl.org/id/ENSSSCP00000026039.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman 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"https://www.ensembl.org/id/ENSSSCG00000016684" } ] } } ], "crossref": [ { "id": "A0A287B8Z9", "url": "https://alphafold.ebi.ac.uk/entry/A0A287B8Z9", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000016684", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016684", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100513510", "url": "https://www.ncbi.nlm.nih.gov/gene/100513510", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR005322", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005322", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100513510", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513510", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HEWARSV", "url": "https://omabrowser.org/oma/group/HEWARSV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287B8Z9", "url": "https://www.orthodb.org/?gene=A0A287B8Z9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12994", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12994", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12994:SF7", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12994:SF7", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03577", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03577", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003134860", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134860", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZVA9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZVA9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZVA9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZVA9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B8Z9", "url": "https://www.uniprot.org/uniprotkb/A0A287B8Z9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B8Z9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B8Z9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BNG4", "url": "https://www.uniprot.org/uniprotkb/A0A287BNG4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BNG4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BNG4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BNY2", "url": "https://www.uniprot.org/uniprotkb/A0A287BNY2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BNY2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BNY2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F7S3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F7S3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F7S3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F7S3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SIG7", "url": "https://www.uniprot.org/uniprotkb/F1SIG7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SIG7-1", "url": "https://www.uniprot.org/uniprotkb/F1SIG7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAVAPPSYCFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSATDHEPESKVECTYISVDQVPRTHAIMISRPAWLWGAEMGANEHGVCIANEAINAREPAAETEALLGMDLVRLGLERSATAKEALDVIVALLEEHGQGGNYYEDAGSCHSFQSAYLIVDCEEAWVLETVGKYWAAEKITEGVRCVCNQLSLTTKIDAEHPELRSYAQSQGWWTGEDEFNFSDVFSPSDDHLACCSGKDSLEKQEESITVQTMIDILRDKASGVCIDSESFLTTASVVSVLPQNRSSPCIHYFTGTPDPSRSIFKPFIFVDDVKLVPKAQSPCFGDNDPARKEPRFQEKPDRRHELYKAHEWARAIIESDEERGQKLRTTMLDLEQQGLEAMEELLSSSAPLDPAEVADLFYDCVDTEIKFFK", "length": 414, "header": "tr|A0A287B8Z9-1|A0A287B8Z9_PIG Isoform 1 of Secernin 1 OS=Sus scrofa OX=9823 GN=SCRN1 PE=1 SV=1 CANONICAL=A0A287B8Z9-1" }, "isoforms": [ { "isoform_ac": "A0A286ZVA9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZVA9/entry", "sequence": { "sequence": "MSSFIFQVKTQRPGEGKTRLFKRCVLLTGQRSEIGLSGAVSLCVRLAGSVWGSNGTDWEARWCTYISVDQVPRTHAIMISRPAWLWGAEMGANEHGVCIANEAINAREPAAETEALLGMDLVRLGLERSATAKEALDVIVALLEEHGQGGNYYEDAGSCHSFQSAYLIVDCEEAWVLETVGKYWAAEKITEGVRCVCNQLSLTTKIDAEHPELRSYAQSQGWWTGEDEFNFSDVFSPSDDHLACCSGKDSLEKQEESITVQTMIDILRDKASGVCIDSESFLTTASVVSVLPQNRSSPCIHYFTGTPDPSRSIFKPFIFVDDVKLVPKAQSPCFGDNDPARKEPRFQEKPDRRHELYKAHEWARAIIESDEERGQKLRTTMLDLEQQGLEAMEELLSSSAPLDPAEVADLFYDCVDTEIKFFK", "length": 423, "header": "tr|A0A286ZVA9-1|A0A287B8Z9_PIG Computationally mapped isoform of Secernin 1 OS=Sus scrofa OX=9823 GN=SCRN1 PE=1 SV=1 CANONICAL=A0A287B8Z9-1" }, "locus": { "chromosome": "18", "start_pos": 42983993, "end_pos": 42961070, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050220.2", "url": "https://www.ensembl.org/id/ENSSSCT00000050220.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035397.1", "url": "https://www.ensembl.org/id/ENSSSCP00000035397.1" } ] } }, { "isoform_ac": "A0A287B8Z9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B8Z9/entry", "sequence": { "sequence": "MAVAPPSYCFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSATDHEPESKVECTYISVDQVPRTHAIMISRPAWLWGAEMGANEHGVCIANEAINAREPAAETEALLGMDLVRLGLERSATAKEALDVIVALLEEHGQGGNYYEDAGSCHSFQSAYLIVDCEEAWVLETVGKYWAAEKITEGVRCVCNQLSLTTKIDAEHPELRSYAQSQGWWTGEDEFNFSDVFSPSDDHLACCSGKDSLEKQEESITVQTMIDILRDKASGVCIDSESFLTTASVVSVLPQNRSSPCIHYFTGTPDPSRSIFKPFIFVDDVKLVPKAQSPCFGDNDPARKEPRFQEKPDRRHELYKAHEWARAIIESDEERGQKLRTTMLDLEQQGLEAMEELLSSSAPLDPAEVADLFYDCVDTEIKFFK", "length": 414, "header": "tr|A0A287B8Z9-1|A0A287B8Z9_PIG Isoform 1 of Secernin 1 OS=Sus scrofa OX=9823 GN=SCRN1 PE=1 SV=1 CANONICAL=A0A287B8Z9-1" }, "locus": { "chromosome": "18", "start_pos": 42983993, "end_pos": 42952092, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053157.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053157.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052576.1", "url": "https://www.ensembl.org/id/ENSSSCP00000052576.1" } ] } }, { "isoform_ac": "A0A287BNG4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BNG4/entry", "sequence": { "sequence": "MALTSVSTHLPLPFSLWSLSLSRMAVAPPSYCFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSATDHEPESKVECTYISVDQVPRTHAIMISRPAWLWGAEMGANEHGVCIANEAINAREPAAETEALLGMDLVRLGLERSATAKEALDVIVALLEEHGQGGNYYEDAGSCHSFQSAYLIVDCEEAWVLETVGKYWAAEKITEGVRCVCNQLSLTTKIDAEHPELRSYAQSQGWWTGEDEFNFSDVFSPSDDHLACCSGKDSLEKQEESITVQTMIDILRDKASGVCIDSESFLTTASVVSVLPQNRSSPCIHYFTGTPDPSRSIFKPFIFVDDVKLVPKAQSPCFGDNDPARKEPRFQEKPDRRHELYKAHEWARAIIESDEERGQKLRTTMLDLEQQGLEAMEELLSSSAPLDPAEVADLFYDCVDTEIKFFK", "length": 437, "header": "tr|A0A287BNG4-1|A0A287BNG4_PIG Computationally mapped isoform of Secernin 1 OS=Sus scrofa OX=9823 GN=SCRN1 PE=1 SV=1 CANONICAL=A0A287B8Z9-1" }, "locus": { "chromosome": "18", "start_pos": 42983993, "end_pos": 42924727, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062389.2", "url": "https://www.ensembl.org/id/ENSSSCT00000062389.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057982.2", "url": "https://www.ensembl.org/id/ENSSSCP00000057982.2" } ] } }, { "isoform_ac": "A0A287BNY2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BNY2/entry", "sequence": { "sequence": "MALTSVSTHLSPVCGFINPATAPDVATVIAAEAAPAPSPAAASAPPSRVRSPPPRRMAVAPPSYCFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSATDHEPESKVECTYISVDQVPRTHAIMISRPAWLWGAEMGANEHGVCIANEAINAREPAAETEALLGMDLVRLGLERSATAKEALDVIVALLEEHGQGGNYYEDAGSCHSFQSAYLIVDCEEAWVLETVGKYWAAEKITEGVRCVCNQLSLTTKIDAEHPELRSYAQSQGWWTGEDEFNFSDVFSPSDDHLACCSGKDSLEKQEESITVQTMIDILRDKASGVCIDSESFLTTASVVSVLPQNRSSPCIHYFTGTPDPSRSIFKPFIFVDDVKLVPKAQSPCFGDNDPARKEPRFQEKPDRRHELYKAHEWARAIIESDEERGQKLRTTMLDLEQQGLEAMEELLSSSAPLDPAEVADLFYDCVDTEIKFFK", "length": 470, "header": "tr|A0A287BNY2-1|A0A287BNY2_PIG Computationally mapped isoform of Secernin 1 OS=Sus scrofa OX=9823 GN=SCRN1 PE=1 SV=1 CANONICAL=A0A287B8Z9-1" }, "locus": { "chromosome": "18", "start_pos": 42983993, "end_pos": 42924727, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040055.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040055.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057792.1", "url": "https://www.ensembl.org/id/ENSSSCP00000057792.1" } ] } }, { "isoform_ac": "A0A8W4F7S3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F7S3/entry", "sequence": { "sequence": "IPLPFSLWSLSLSRMAVAPPSYCFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSATDHEPESKVECTYISVDQVPRTHAIMISRPAWLWGAEMGANEHGVCIANEAINAREPAAETEALLGMDLVRLGLERSATAKEALDVIVALLEEHGQGGNYYEDAGSCHSFQSAYLIVDCEEAWVLETVGKYWAAEKITEGVRCVCNQLSLTTKIDAEHPELRSYAQSQGWWTGEDEFNFSDVFSPSDDHLACCSGKDSLEKQEESITVQTMIDILRDKASGVCIDSESFLTTASVVSVLPQNRSSPCIHYFTGTPDPSRSIFKPFIFVDDVKLVPKAQSPCFGDNDPARKEPRFQEKPDRRHELYKAHEWARAIIESDEERGQKLRTTMLDLEQQGLEAMEELLSSSAPLDPAEVADLFYDCVDTEIKFFK", "length": 428, "header": "tr|A0A8W4F7S3-1|A0A287B8Z9_PIG Computationally mapped isoform of Secernin 1 OS=Sus scrofa OX=9823 GN=SCRN1 PE=1 SV=1 CANONICAL=A0A287B8Z9-1" }, "locus": { "chromosome": "18", "start_pos": 42983993, "end_pos": 42952013, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105431.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105431.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075378.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075378.1" } ] } }, { "isoform_ac": "F1SIG7-1", "url": "https://www.uniprot.org/uniprotkb/F1SIG7/entry", "sequence": { "sequence": "MALTSVSTHLSPVCGFINPATAPDVATVIAAEAAPAPSPAAASAPPSRVRSPPPRRMAVAPPSYCFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSATDHEPESKVECTYISVDQVPRTHAIMISRPAWLWGAEMGANEHGVCIANEAINAREPAAETEALLGMDLVRLGLERSATAKEALDVIVALLEEHGQGGNYYEDAGSCHSFQSAYLIVDCEEAWVLETVGKYWAAEKITESITVQTMIDILRDKASGVCIDSESFLTTASVVSVLPQNRSSPCIHYFTGTPDPSRSIFKPFIFVDDVKLVPKAQSPCFGDNDPARKEPRFQEKPDRRHELYKAHEWARAIIESDEERGQKLRTTMLDLEQQGLEAMEELLSSSAPLDPAEVADLFYDCVDTEIKFFK", "length": 405, "header": "tr|F1SIG7-1|A0A287B8Z9_PIG Computationally mapped isoform of Secernin 1 OS=Sus scrofa OX=9823 GN=SCRN1 PE=1 SV=4 CANONICAL=A0A287B8Z9-1" }, "locus": { "chromosome": "18", "start_pos": 42983993, "end_pos": 42924727, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018165.5", "url": "https://www.ensembl.org/id/ENSSSCT00000018165.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017674.4", "url": "https://www.ensembl.org/id/ENSSSCP00000017674.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SIG7", "url": "https://www.uniprot.org/uniprotkb/F1SIG7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100513510", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513510", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "F1N8X7-1", "protein_name": "Secernin 1", "gene_name": "SCRN1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAEAPPSYCFVAFPPCSKDGLVVFGKNSARPRDEVQEVVYFAAATHDPGSKVECTYIEIEQVPKTHAVALSRPSWLWGAEMGANEHGVCIANEAVVTREPASESEALLGMDLVRLGLERGSTAKEALDVIVALLEEHGQGGNYYEDASSCHAFQSAFLIVDRNEAWVLETSGKYWAAEKITEGVKCICNQLSLTTKIDAEHPELRDYVRSQGWWNGDSDFNFSEVFSLAADHLACCSGRESLEKQSGDVSAQTMIDVLRDKDSGVCVDSESFLTTASIVSVLPQDPSFPCVHYFTGTPDPSRSVFKPFIFVDDVKLVPKVQSPSFGDDDPAKKIPRFQEKPDRRHELYKAHEWARSLLESDQEKGQKLMSIMLDLEKQGLEAMEDILTRTEILDPAEVVDLFYDCVDTELKFFK", "length": 414 }, "evidence": [ { "id": "A0A287B8Z9", "url": "https://omabrowser.org/oma/group/A0A287B8Z9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3HX08-1", "protein_name": "Secernin-1", "gene_name": "Scrn1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGAPPSYCFVALPPRAKDGLVVFGKNSARPRDEVQEVVYFPAVDHEAESKVECTYISINQVPRTHAIVISRPAWLWGAEMGANEHGVCIANEAINAREPAAETEALLGMDLVRLGLERGTTAKEALDVIVSLLEEHGQGGNYYEDGLSCHSFQSAYLLVDRHEAWVLETVGKYWAAERITEGVRCICNQLSLTTKMDEEHPELRTYAQSQGWWTGEDEFNFAQVFSPADDHVDCCAGKACLEKQEESITVQTMINILRDKASGVCIDSESFLTTASIVSVLPQNRSSPCIHYFTGTPDPSRSIFKPFIFVDDVKLVPKAQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAVIESDQEQGRTLRKTMLELEKQGLEAMEEILSSPEPPDPAEVGDLFYDCVDTEMKFFK", "length": 414 }, "evidence": [ { "id": "A0A287B8Z9", "url": "https://omabrowser.org/oma/group/A0A287B8Z9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P83939-1", "protein_name": "Secernin-1", "gene_name": "SCRN1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAVAPPSYCFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSAADHEPESKVECTYISINQVPRTHAIVISRPAWLWGAEMGANEHGVCIANEAINAREPAAETEALLGMDLVRLGLERGATAKEALDVIVALLEEHGQGGNYYEDANSCHSFQSAFLIVDREEAWVLETVGKYWAAEKITEGVKCICNQLSLTTKIDAEHPELRSYAQSQGWWMGEDEFNFSEVFSPADDHLTCCSGRDTLEKQEESITVQTMIDVLRDKASGVCVDSESFLTTASVVSVLPQNGSSPCIHYFTGTPDPSRSIFKPFIFVDDVKLVPKAQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAVLESDEEQGQKLRKTMLELEKQGLEAMEEILTSSDPLDPTEVGDLFYDCVDTEIKFFK", "length": 414 }, "evidence": [ { "id": "A0A287B8Z9", "url": "https://omabrowser.org/oma/group/A0A287B8Z9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q12765-1", "protein_name": "Secernin-1", "gene_name": "SCRN1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAAPPSYCFVAFPPRAKDGLVVFGKNSARPRDEVQEVVYFSAADHEPESKVECTYISIDQVPRTYAIMISRPAWLWGAEMGANEHGVCIANEAINTREPAAEIEALLGMDLVRLGLERGETAKEALDVIVSLLEEHGQGGNYFEDANSCHSFQSAYLIVDRDEAWVLETIGKYWAAEKVTEGVRCICSQLSLTTKMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDCGAGKDSLEKQEESITVQTMMNTLRDKASGVCIDSEFFLTTASGVSVLPQNRSSPCIHYFTGTPDPSRSIFKPFIFVDDVKLVPKTQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAIIESDQEQGRKLRSTMLELEKQGLEAMEEILTSSEPLDPAEVGDLFYDCVDTEIKFFK", "length": 414 }, "evidence": [ { "id": "A0A287B8Z9", "url": "https://omabrowser.org/oma/group/A0A287B8Z9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6AY84-1", "protein_name": "Secernin-1", "gene_name": "Scrn1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSGAPPSYSFVALPPRAKDGLVVFGKNSARPRDEVQEVVYFPAVDHEAESKVECTYISIDQVPRTHAIVISRPAWLWGAEMGANEHGVCIANEAINAREPAAETEALLGMDLVRLGLERGTTAKEALDIIVSLLDEHGQGGNYYEDAHSCHSFQSAYLLVDRDEAWVLETVGKYWAAERITEGVRCICNHLSLTTKMDEEHPELRTYAQSQGWWTGEDEFNFAQVFSPADDHLDCCAGKDSLEKQEESITVQTMINILRDKASGVCIDSESFLTTASIVSVLPQNRSSPCIHYFTGTPDPSRSIFKPFIFVDDVKLVPKAQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAVIESDQEQGRTLRKTMLELEKQGLEAMEEILSSPEPPDPAEVGDLFYDCVDTEMKFFK", "length": 414 }, "evidence": [ { "id": "A0A287B8Z9", "url": "https://omabrowser.org/oma/group/A0A287B8Z9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9CZC8-1", "protein_name": "Secernin-1", "gene_name": "Scrn1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGAPPSYSFVALPPRAKDGLVVFGKNSARPRDEVQEVVYFPAVDHDAESKVECTYISIDQVPRTHAIVISRPAWLWGAEMGANEHGVCIANEAINAREPAAETEALLGMDLVRLGLERGTTAKEALDIIVSLLDEHGQGGNYYEDAHSCHSFQSAYLLVDRDEAWVLETVGKYWAAERITEGVRCICNHLSLATKLDEEHPELRTYAQSQGWWTGDDEFNFAQVFSPADDRLDCCAGQDSLEKQEESITVQTMINILRDKASGVCIDSESFLTTASIVSVLPQNRSSPCIHYFTGTPDPSRSIFKPFIFVDDVKLVPKAQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAVIESDEEQGRTLRKTMLELEKQGLEAMDEILSSPEPPDPAEVGDLFYDCVDTEMKFFK", "length": 414 }, "evidence": [ { "id": "A0A287B8Z9", "url": "https://omabrowser.org/oma/group/A0A287B8Z9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "A0A287B8Z9", "url": "https://www.uniprot.org/uniprotkb/A0A287B8Z9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "dipeptidase activity", "id": "GO:0016805", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016805", "evidence": [ { "database": "UniProtKB", "id": "A0A287B8Z9", "url": "https://www.uniprot.org/uniprotkb/A0A287B8Z9" } ], "pmid": "" }, { "name": "cysteine-type exopeptidase activity", "id": "GO:0070004", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070004", "evidence": [ { "database": "UniProtKB", "id": "A0A287B8Z9", "url": "https://www.uniprot.org/uniprotkb/A0A287B8Z9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nuclear membrane", "id": "GO:0031965", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031965", "evidence": [ { "database": "UniProtKB", "id": "A0A287B8Z9", "url": "https://www.uniprot.org/uniprotkb/A0A287B8Z9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 221, "end_pos": 223, "annotation": "n_glycosylation_sequon" }, { "start_pos": 285, "end_pos": 287, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287B8Z9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 414, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287B8Z9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287B8Z9" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 221, "end_pos": 223 }, { "start_pos": 285, "end_pos": 287 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287BCL7-1", "uniprot_ac": "A0A287BCL7", "uniprot_id": "A0A287BCL7_PIG", "mass": { "chemical_mass": 86326.0, "monoisotopic_mass": 86326.0 }, "refseq": {}, "gene_names": [ { "name": "CFAP20DC", "type": "recommended", "evidence": [ { "id": "A0A287BCL7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BCL7" } ] } ], "protein_names": [ { "name": "CFAP20 domain containing", "type": "synonym", "evidence": [ { "id": "A0A287BCL7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BCL7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BCL7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCL7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CFAP20DC", "url": "https://www.uniprot.org/uniprotkb/A0A287BCL7", "locus": { "chromosome": "13", "start_pos": 40486282, "end_pos": 40768623, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011482", "url": "https://www.ensembl.org/id/ENSSSCG00000011482" } ] } } ], "crossref": [ { "id": "A0A287BCL7", "url": "https://alphafold.ebi.ac.uk/entry/A0A287BCL7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000011482", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011482", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR007714", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007714", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040441", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040441", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR12458", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12458", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05018", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05018", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287A0B6", "url": "https://www.uniprot.org/uniprotkb/A0A287A0B6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A0B6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A0B6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AQW8", "url": "https://www.uniprot.org/uniprotkb/A0A287AQW8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AQW8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AQW8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BCL7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCL7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BCL7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCL7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2E6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2E6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2E6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2E6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RAF7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RAF7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RAF7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RAF7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFKNEYQGGAFVEIFSAQGKNPGAKWKIVGSPSVIWKEYDKEVKSFVFVLEGSSQTNKIQLPKENKQILGLIQRFLVLQIYIPLGQDFSTELLITDLRNIKRRLYLSTVHKEVSSTPLHAKIPLFMIKRKIWCNLCIDLVAFTSEIFKGAVFQSLDGIIVSATCKLRKIFTLKSKPQDTTDKGAGYDVPFTTDEPTDIIPRSCQLTTDVPQVTQLLNMTKLRQTEIKFGGHLLNSAESDQFISRGTRRTRNSKNQDVCHIAFGSKVLGPPPLSGRRTNMRISSETVRSIGSRNNQSCQQSTVEKCVNNTEMSTLLLSESEEQGDKENIRQIKQAVPIHANLHIIHPHPPQEPSADKNNNRRRLRLKSTSRERTETPSVSDEWIFPENDDHIPHLVSSTQSLLLDEDSCHSSHLWLEASKESEHDQQAEETQIFPKDIFTFSSRPRSAPHGKTQNMSPEGCPFILDLKKDTSVTMGDTQLEDDFYGGDSSEEGNHGVQGSPAPATSPPGLTQLLESMLGKAAKWTSKGYQKSANAEAGASESQNSLMEQIDKRDFEMSLVPTPCLSPPGIRSESSPEIPDPIIKAKDLLAHQVSASLYKISGKEISGEMLKPIPEVSEYDWRNYQPNPMSESELQMLASLRRQQNEELEDTGASHGLSASQVDNCNVSISTSSDDTTTWNSCLPPPVNQGRHYQKEMNPPSPSNPRDWLNMLSPPIVPPSHQPAEQHQDSSGSLSAQGEEDLSVEEDEEVLTLLYDPCLNCYFDPQTGKYYELV", "length": 773, "header": "tr|A0A287BCL7-1|A0A287BCL7_PIG Isoform 1 of CFAP20 domain containing OS=Sus scrofa OX=9823 GN=CFAP20DC PE=4 SV=3 CANONICAL=A0A287BCL7-1" }, "isoforms": [ { "isoform_ac": "A0A287A0B6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A0B6/entry", "sequence": { "sequence": "MFKNEYQEYDKEVKSFVFVLEGSSQTNKIQLPKENKQILGLIQRFLVLQIYIPLGQDFSTELLITDLRNIKRRLYLSTVHKEVSSTPLHAKIPLFMIKRKIWCNLCIDLVAFTSEIFKGAVFQSLDGIIVSATCKLRKIFTLKSKPQDTTDKAGYDVPFTTDEPTDIIPRSCQLTTDVPQVTQLLNMTKLRQTEIKFGGHLLNSAESDQFISRGTRRTRNSKNQDVCHIAFGSKVLGPPPLSGRRTNMRISSETVRSIGSRNNQSCQQSTVEKCVNNTEMSTLLLSESEEQGDKENIRQIKQAVPIHANLHIIHPHPPQEPSADKNNNRRRLRLKSTSRERTETPSVSDEWIFPENDDHIPHLVSSTQSLLLDEDSCHSSHLWLEASKESEHDQQAEETQIFPKDIFTFSSRPRSAPHGKTQNMSPEGCPFILDLKKDTSVTMGDTQLEDDFYGGDSSEEGNHGVQGSPAPATSPPGLTQLLESMLGKAAKWTSKGYQKSANAEAGASESQNSLMEQIDKRDFEMSLVPTPCLSPPGIRSESSPEIPDPIIKAKDLLAHQVSASLYKISGKEISGEMLKPIPEVSEYDWRNYQPNPMSESELQMLASLRRQQNEELEDTGASHGLSASQVDNCNVSISTSSDDTTTWNSCLPPPVNQGRHYQKEMNPPSPSNPRDWLNMLSPPIVPPSHQPAEQHQDSSGSLSAQGEEDLSVEEDEEVLTLLYDPCLNCYFDPQTGKYYELV", "length": 742, "header": "tr|A0A287A0B6-1|A0A287BCL7_PIG Computationally mapped isoform of CFAP20 domain containing OS=Sus scrofa OX=9823 GN=CFAP20DC PE=4 SV=3 CANONICAL=A0A287BCL7-1" }, "locus": { "chromosome": "13", "start_pos": 40768233, "end_pos": 40486721, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065414.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065414.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037353.3", "url": "https://www.ensembl.org/id/ENSSSCP00000037353.3" } ] } }, { "isoform_ac": "A0A287AQW8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AQW8/entry", "sequence": { "sequence": "MFKNEYQGGAFVEIFSAQGKNPGAKWKIVGSPSVIWKEYDKEVKSFVFVLEGSSQTNKIQLPKENKQILGLIQRFLVLQIYIPLGQDFSTELLITDLRNIKRRLYLSTVHKEVSSTPLHAKIPLFMIKRKIWCNLCIDLVAFTSEIFKGAVFQSLDGIIVSATCKLRKIFTLKSKPQDTTDKGGMFNLLSKFLNSPIF", "length": 198, "header": "tr|A0A287AQW8-1|A0A287BCL7_PIG Computationally mapped isoform of CFAP20 domain containing OS=Sus scrofa OX=9823 GN=CFAP20DC PE=4 SV=2 CANONICAL=A0A287BCL7-1" }, "locus": { "chromosome": "13", "start_pos": 40768233, "end_pos": 40640991, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058651.3", "url": "https://www.ensembl.org/id/ENSSSCT00000058651.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046454.2", "url": "https://www.ensembl.org/id/ENSSSCP00000046454.2" } ] } }, { "isoform_ac": "A0A287BCL7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCL7/entry", "sequence": { "sequence": "MFKNEYQGGAFVEIFSAQGKNPGAKWKIVGSPSVIWKEYDKEVKSFVFVLEGSSQTNKIQLPKENKQILGLIQRFLVLQIYIPLGQDFSTELLITDLRNIKRRLYLSTVHKEVSSTPLHAKIPLFMIKRKIWCNLCIDLVAFTSEIFKGAVFQSLDGIIVSATCKLRKIFTLKSKPQDTTDKGAGYDVPFTTDEPTDIIPRSCQLTTDVPQVTQLLNMTKLRQTEIKFGGHLLNSAESDQFISRGTRRTRNSKNQDVCHIAFGSKVLGPPPLSGRRTNMRISSETVRSIGSRNNQSCQQSTVEKCVNNTEMSTLLLSESEEQGDKENIRQIKQAVPIHANLHIIHPHPPQEPSADKNNNRRRLRLKSTSRERTETPSVSDEWIFPENDDHIPHLVSSTQSLLLDEDSCHSSHLWLEASKESEHDQQAEETQIFPKDIFTFSSRPRSAPHGKTQNMSPEGCPFILDLKKDTSVTMGDTQLEDDFYGGDSSEEGNHGVQGSPAPATSPPGLTQLLESMLGKAAKWTSKGYQKSANAEAGASESQNSLMEQIDKRDFEMSLVPTPCLSPPGIRSESSPEIPDPIIKAKDLLAHQVSASLYKISGKEISGEMLKPIPEVSEYDWRNYQPNPMSESELQMLASLRRQQNEELEDTGASHGLSASQVDNCNVSISTSSDDTTTWNSCLPPPVNQGRHYQKEMNPPSPSNPRDWLNMLSPPIVPPSHQPAEQHQDSSGSLSAQGEEDLSVEEDEEVLTLLYDPCLNCYFDPQTGKYYELV", "length": 773, "header": "tr|A0A287BCL7-1|A0A287BCL7_PIG Isoform 1 of CFAP20 domain containing OS=Sus scrofa OX=9823 GN=CFAP20DC PE=4 SV=3 CANONICAL=A0A287BCL7-1" }, "locus": { "chromosome": "13", "start_pos": 40768233, "end_pos": 40486721, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043255.3", "url": "https://www.ensembl.org/id/ENSSSCT00000043255.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054265.3", "url": "https://www.ensembl.org/id/ENSSSCP00000054265.3" } ] } }, { "isoform_ac": "A0A5G2R2E6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2E6/entry", "sequence": { "sequence": "MIKRKIWCNLCIDLVAFTSEIFKGAVFQSLDGIIVSATCKLRKIFTLKSKPQDTTDKGAGYDVPFTTDEPTDIIPRSCQLTTDVPQVTQLLNMTKLRQTEIKFGGHLLNSAESDQFISRGTRRTRNSKNQDVCHIAFGSKVLGPPPLSGRRTNMRISSETVRSIGSRNNQSCQQSTVEKCVNNTEMSTLLLSESEEQGDKENIRQIKQAVPIHANLHIIHPHPPQEPSADKNNNRRRLRLKSTSRERTETPSVSDEWIFPENDDHIPHLVSSTQSLLLDEDSCHSSHLWLEASKESEHDQQAEETQIFPKDIFTFSSRPRSAPHGKTQNMSPEGCPFILDLKKDTSVTMGDTQLEDDFYGGDSSEEGNHGVQGSPAPATSPPGLTQLLESMLGKAAKWTSKGYQKSANAEAGASESQNSLMEQIDKRDFEMSLVPTPCLSPPGIRSESSPEIPDPIIKAKDLLAHQVSASLYKISGKEISGEMLKPIPEVSEYDWRNYQPNPMSESELQMLASLRRQQNEELEDTGASHGLSASQVDNCNVSISTSSDDTTTWNSCLPPPVNQGRHYQKEMNPPSPSNPRDWLNMLSPPIVPPSHQPAEQHQDSSGSLSAQGEEDLSVEEDEEVLTLLYDPCLNCYFDPQTGKYYELV", "length": 648, "header": "tr|A0A5G2R2E6-1|A0A287BCL7_PIG Computationally mapped isoform of CFAP20 domain containing OS=Sus scrofa OX=9823 GN=CFAP20DC PE=4 SV=1 CANONICAL=A0A287BCL7-1" }, "locus": { "chromosome": "13", "start_pos": 40677134, "end_pos": 40486721, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": 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"database": "Ensembl Peptide", "id": "ENSSSCP00000074012.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074012.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2E6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2E6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 217, "end_pos": 219, "annotation": "n_glycosylation_sequon" }, { "start_pos": 294, "end_pos": 296, "annotation": "n_glycosylation_sequon" }, { "start_pos": 307, "end_pos": 309, "annotation": "n_glycosylation_sequon" }, { "start_pos": 454, "end_pos": 456, "annotation": "n_glycosylation_sequon" }, { "start_pos": 665, "end_pos": 667, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287BCL7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 773, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287BCL7-F1.pdb", "url_external": 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"database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029071", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029071", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036241", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036241", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR23333", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23333", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23333:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23333:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00789", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00789", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08059", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08059", "database": "Pfam", "categories": [ "Protein Classification", 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"header": "tr|A0A287A1A7-1|A0A287BCT3_PIG Computationally mapped isoform of UBX domain-containing protein 11 OS=Sus scrofa OX=9823 GN=UBXN11 PE=4 SV=3 CANONICAL=A0A287BCT3-1" }, "locus": { "chromosome": "6", "start_pos": 83700344, "end_pos": 83689993, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061813.3", "url": "https://www.ensembl.org/id/ENSSSCT00000061813.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037536.3", "url": "https://www.ensembl.org/id/ENSSSCP00000037536.3" } ] } }, { "isoform_ac": "A0A287AHI4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AHI4/entry", "sequence": { "sequence": "MTAKKFWKPGDSLVPPEVDFDRLLASLKDLSELVVDSDTQVTPVPSRVPHHALEPIPLKLYRNGIMMFDGPFRPFYAPSTQRCLRDILDGFFPSELQRLYPDGVPFKVSDLRDQVYPENGLDPFPGEGRVVGLQRIRKPWDRTEHPGSRMTAEKFLNRLPKFVIRQGEVIDIRGPIRDTLQNCCPLPARIQEIVVETPALAAERERSQKSPESPAPQLSMLRIKSENGEQAFLLMMRPEDTIGDDPFFPVPRAVDATTFEIFSTFPPTVYHDALTLLAAGLVPSATLLLRAHRAPRPAPRPE", "length": 302, "header": "tr|A0A287AHI4-1|A0A287BCT3_PIG Computationally mapped isoform of UBX domain-containing protein 11 OS=Sus scrofa OX=9823 GN=UBXN11 PE=4 SV=3 CANONICAL=A0A287BCT3-1" }, "locus": { "chromosome": "6", "start_pos": 83700308, "end_pos": 83689808, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038385.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038385.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043497.3", "url": "https://www.ensembl.org/id/ENSSSCP00000043497.3" } ] } }, { "isoform_ac": "A0A287BCT3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCT3/entry", "sequence": { "sequence": "MMKKLRDLEQQVKAQADEMLFKDRKIRALEELVETLQEHQGSVTLRRQEELEATCTQLQRQVGEMERFLGDYGLQWVGEPVDQEDSEDNERDWMTAKKFWKPGDSLVPPEVDFDRLLASLKDLSELVVDSDTQVTPVPSRVPHHALEPIPLKLYRNGIMMFDGPFRPFYAPSTQRCLRDILDGFFPSELQRLYPDGVPFKVSDLRDQVYPENGLDPFPGEGRVVGLQRIRKPWDRTEHPGSRMTAEKFLNRLPKFVIRQGEVIDIRGPIRDTLQNCCPLPARIQEIVVETPALAAERERSQKSPESPAPQLSMLRIKSENGEQAFLLMMRPEDTIGDVRVLLAQARAVDATTFEIFSTFPPTVYHDALTLLAAGLVPSATLLLRAHRAPRPAPRPE", "length": 396, "header": "tr|A0A287BCT3-1|A0A287BCT3_PIG Isoform 1 of UBX domain-containing protein 11 OS=Sus scrofa OX=9823 GN=UBXN11 PE=4 SV=3 CANONICAL=A0A287BCT3-1" }, "locus": { "chromosome": "6", "start_pos": 83704090, "end_pos": 83689808, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059711.3", "url": "https://www.ensembl.org/id/ENSSSCT00000059711.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053905.3", "url": "https://www.ensembl.org/id/ENSSSCP00000053905.3" } ] } }, { "isoform_ac": "A0A8W4FL60-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FL60/entry", "sequence": { "sequence": "MERFLGDYGLQWVGEPVDQEDSEDNERDWMTAKKFWKPGDSLVPPEVDFDRLLASLKDLSELVVDSDTQVTPVPSRVPHHALEPIPLKLYRNGIMMFDGPFRPFYAPSTQRCLRDILDGFFPSELQRLYPDGVPFKVSDLRDQVYPENGLDPFPGEGRVVGLQRIRKPWDRTEHPGSRMTAEKFLNRLPKFVIRQGEVIDIRGPIRDTLQVRPALAPPAFLGGFIIIHAQPTRVAAYLEAQVWGPEDDLDGEVNPSELFHCLLERMLLVRALSWDQRADGQCRGMAGRGEKSEESWLGVSSSPI", "length": 304, "header": "tr|A0A8W4FL60-1|A0A287BCT3_PIG Computationally mapped isoform of UBX domain-containing protein 11 OS=Sus scrofa OX=9823 GN=UBXN11 PE=4 SV=1 CANONICAL=A0A287BCT3-1" }, "locus": { "chromosome": "6", "start_pos": 83701517, "end_pos": 83691358, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000103769.1", "url": "https://www.ensembl.org/id/ENSSSCT00000103769.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079038.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079038.1" } ] } }, { "isoform_ac": "A0A8W4FN74-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FN74/entry", "sequence": { "sequence": "MRGSVCHHGLENSMSHDRGCLRRFMLSWAWPSPDTFTPPLPLCSCEEGLCEEEISTVAPAGMMRGACGKSRAQVSDLRDQVYPENGLDPFPGEGRVVGLQRIRKPWDRTEHPGSRMTAEKFLNRLPKFVIRQGEVIDIRGPIRDTLQNCCPLPARIQEIVVETPALAAERERSQKSPESPAPQLSMLRIKSENGEQAFLLMMRPEDTIGDVRVLLAQARAVDATTFEIFSTFPPTVYHDALTLLAAGLVPSATLLLRAHRAPRPAPRPE", "length": 269, "header": "tr|A0A8W4FN74-1|A0A287BCT3_PIG Computationally mapped isoform of UBX domain-containing protein 11 OS=Sus scrofa OX=9823 GN=UBXN11 PE=4 SV=1 CANONICAL=A0A287BCT3-1" }, "locus": { "chromosome": "6", "start_pos": 83692382, "end_pos": 83689808, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000099250.1", "url": "https://www.ensembl.org/id/ENSSSCT00000099250.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080804.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080804.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FL60", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FL60" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-9696264", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9696264", "resource": "Reactome", "description": "RND3 GTPase cycle" }, { "id": "R-SSC-9696270", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9696270", "resource": "Reactome", "description": "RND2 GTPase cycle" }, { "id": "R-SSC-9696273", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9696273", "resource": "Reactome", "description": "RND1 GTPase cycle" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoskeleton", "id": "GO:0005856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005856", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCT3", "url": "https://www.uniprot.org/uniprotkb/A0A287BCT3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "proteasome-mediated ubiquitin-dependent protein catabolic process", "id": "GO:0043161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043161", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCT3", "url": "https://www.uniprot.org/uniprotkb/A0A287BCT3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "ubiquitin binding", "id": "GO:0043130", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043130", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCT3", "url": "https://www.uniprot.org/uniprotkb/A0A287BCT3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287BCT3-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 396, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287BCT3-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287BCT3" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287BCT3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BCT3" }, { "id": "PS51399", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51399" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SEP", "eco_id": "ECO_0000259", "start_pos": 146, "end_pos": 210, "start_aa": "Leu", "end_aa": "Pro", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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Classification" ] }, { "id": "I3LG94", "url": "https://www.orthodb.org/?gene=I3LG94", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12460", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12460", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12460:SF40", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12460:SF40", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04818", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04818", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6807505", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6807505", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003355246", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003355246", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287A4B8", "url": 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"MAAGGGGGSSKASSSSASSAGALESSLDRKFQSVTNTMESIQGLSSWCIENKKHHTTIVYHWMKWLRRSAYPHRLNLFYLANDVIQNCKRKNAIIFRESFADVLPEAAALVKDPSVSKSIERIFKIWEDRNVYPEEMIMALREALTSTNPKAALKSKIVAEFRSQALIEELLLYKRSEDQIELKEKQLSTMRVDVCSTETLKCLKDKTGGKKFSKEFEEASAKLEEFVNGLDKQVKNGPSLTEALENAGIFYEAQYKEVKVVANAYKTFANRVNNLKKKLDQLKSTLPDPEESPVPSPSMDAPSPTGSESPFQGMGGEESQSPTVESEKSATPEPATDNRDVEDMELSDVEDDGSKIIVEDRKEKPVEKSAVSTSIPTKPTESISKASSCTPVPVTMTVTPPLPKPANTSLLSPTPALALPNLANVDLAKISSILSSLTSVMKNTGVSPASRPSPGTPTSPSNLTSGLKTPVPATTTSHNPLANILSKVEITPESILSALSKTQTQSAPALQGLSSLLQSVTGNPVPSSEAASQSTSASPANTTVSNIKGRNLPSNTQSFISKGFSYSPNSSTSEVSSTSASKASIGQSPGLPSTTFKLPSNTLGFTSTHNTSPAAPPTEVAMCQSSEISKPKLESESTSPSLEMKIHNFLKGNPGFSGLNLNIPILSSLGSSAPTESHPSDFQRGPTSTSIDNIDGTPVRDERSGTPTQDEMMDKPTSSSVDTMSLLSKIISPGSSTPSSTRSPPPGREESYPRELSNSLSTYRPFGLGSESPYKQPSDGMERPSSLMDSSQEKFYPDTSFQEDEDYRDFEYSGPPPSAMMNLEKKPAKSILKSSKLSDTTEYQPILSSYSHRAQEFGVKSAFPPSVRALLDSSENCDRLSSSPGLFGAFSIRGNEPGSDRSPSPSKNDSFFTPDSNHNSLSQSTTGHLSLPQKQYPDSPHPVPHRSLFSPQNTLAAPTGHPPTSGVEKVLASTISTTSTIEFKNMLKNASRKPSDDKHFGQAPSKGTASDAVSLSNLTQPSLAATDQQQEEHYRIETRVSSSCLDLPDSTEEKGAPIETLGYHNASNRRMSGEPIQTVESIRVPGKGNRGHGREASRVGWFDLSTSGGSFDNGPSSASELASLGGGGSGGLTGFKTAPYKERAPQFQESVGSFRSNSFNSTFEHHLPPSPLEHGTPFQREPVGPSSAPPAPSKDHGGIFSRDAPTHLPSVDLSNPFTKEAALAHAAPPPGEHSGVPFPTPPPPPPPGEHSSSAGSGVPFSTPPPPPPTVDHSGVVPFPTPPLAEHGVAGAVAVFPKDHSSLLQGTLADHFGVLPGPRDHGGPTQRDLNGPGLSRVRESLSLPSHSLEHLGPAHGGGGGGGSNSSSGPPLGPSHRDAISRSGMILRSPRPDFRPREPFLSRDPFHSLKRPRPPFARGPPFFAPKRPFFPPRY", "length": 1433, "header": "tr|I3LG94-1|A0A287B756_PIG Computationally mapped isoform of Regulation of nuclear pre-mRNA domain-containing protein 2 OS=Sus scrofa OX=9823 GN=RPRD2 PE=1 SV=2 CANONICAL=A0A287B756-1" }, "locus": { "chromosome": "4", "start_pos": 98733267, "end_pos": 98644393, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022559.4", "url": "https://www.ensembl.org/id/ENSSSCT00000022559.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023087.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023087.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1267, "start_aa": "Thr", "end_pos": 1267, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1267", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1296, "start_aa": "Thr", "end_pos": 1296, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1296", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1307, "start_aa": "Thr", "end_pos": 1307, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1307", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 426, "start_aa": "Thr", "end_pos": 426, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr426", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 441, "start_aa": "Thr", "end_pos": 441, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr441", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 764, "start_aa": "Thr", "end_pos": 764, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr764", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LG94", "url": "https://www.uniprot.org/uniprotkb/I3LG94" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100620276", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100620276", "resource": "KEGG Pathway" }, { "id": "R-SSC-6807505", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6807505", "resource": "Reactome", "description": "RNA polymerase II transcribes snRNA genes" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "transcription preinitiation complex", "id": "GO:0097550", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097550", "evidence": [ { "database": "UniProtKB", "id": "A0A287B756", "url": "https://www.uniprot.org/uniprotkb/A0A287B756" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "RNA polymerase II complex binding", "id": "GO:0000993", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000993", "evidence": [ { "database": "UniProtKB", "id": "A0A287B756", "url": "https://www.uniprot.org/uniprotkb/A0A287B756" } ], "pmid": "" }, { "name": "RNA polymerase II C-terminal domain binding", "id": "GO:0099122", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099122", "evidence": [ { "database": "UniProtKB", "id": "A0A287B756", "url": "https://www.uniprot.org/uniprotkb/A0A287B756" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "mRNA 3'-end processing", "id": "GO:0031124", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031124", "evidence": [ { "database": "UniProtKB", "id": "A0A287B756", "url": "https://www.uniprot.org/uniprotkb/A0A287B756" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1016, "end_pos": 1018, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1044, "end_pos": 1046, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1092, 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"end_pos": 639 }, { "start_pos": 935, "end_pos": 937 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 6 }, { "field": "total_sites", "count": 6 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 6 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 6 }, { "field": "exact_o_linked_sites", "count": 6 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 6 }, { "field": "total_sites", "count": 6 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 6 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 6 }, { "field": "exact_o_linked_sites", "count": 6 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B737-1", "uniprot_ac": "A0A287B737", "uniprot_id": "A0A287B737_PIG", "mass": { "chemical_mass": 137574.0, "monoisotopic_mass": 137574.0 }, "refseq": {}, "gene_names": [ { "name": "ITPRID2", "type": "recommended", "evidence": [ { "id": "A0A287B737", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B737" } ] } ], "protein_names": [ { "name": "ITPR interacting domain containing 2", "type": "synonym", "evidence": [ { "id": "A0A287B737", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B737/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B737", "url": "https://www.uniprot.org/uniprotkb/A0A287B737" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ITPRID2", "url": "https://www.uniprot.org/uniprotkb/A0A287B737", "locus": { "chromosome": "15", "start_pos": 87418089, "end_pos": 87326442, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000038730", "url": "https://www.ensembl.org/id/ENSSSCG00000038730" } ] } } ], "crossref": [ { "id": "A0A287B737", "url": "https://alphafold.ebi.ac.uk/entry/A0A287B737", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000038730", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000038730", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR029325", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029325", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029326", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029326", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043444", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043444", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "A0A287B737", "url": "https://www.orthodb.org/?gene=A0A287B737", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR17469", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR17469", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR17469:SF11", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR17469:SF11", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF14722", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14722", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14723", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14723", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287A5U0", "url": "https://www.uniprot.org/uniprotkb/A0A287A5U0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A5U0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A5U0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287APE8", "url": "https://www.uniprot.org/uniprotkb/A0A287APE8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287APE8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287APE8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B2J3", "url": "https://www.uniprot.org/uniprotkb/A0A287B2J3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B2J3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B2J3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B737", "url": "https://www.uniprot.org/uniprotkb/A0A287B737", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B737-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B737-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9G6", "url": "https://www.uniprot.org/uniprotkb/A0A287B9G6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9G6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9G6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDRSLVAEAEEELEWQVASRRRKAWAKCRGSWQASETEDLSTEATTQDEDEDDEEDLPGAKLPAAAGRGNVPNEKIAIWLKDCRTPLGASLDEQNSSTLKGVLVRNGGSFEDDLSLGAEANHLHETDAPIENCNNILAKERRLQFHQKGRSMNSTGSGKSSGTVSSVSELLELYEEDPEEILYNLGFGRDEPDIASKIPSRFFNSSSFARGIDIKVFLSAQMQRMEVENPNYALTSRFRQIEVLTTVANAFSSLYSQVSGTPLQRIGSMSSVASNKEADSPPPLTRSNTANRLMKTLSKLNLCVDKTEKGEGSTPSPATEKGKNLNVSVVEESGIKNDQKSQKIVKKKDSSYMLATVKEEVSGSPAAIMENADIDRPSEEADSNFNQETESGHTQSHENKLGEESGIIETDLGSDSNLSSHSDLENSGEPKSVAMSTTEKEPCAPLTIPSIRNIMAQQKDSFEMEEVQSTEGEVPHVPATYQLGLNKSKRDQLLRTASQHSDSSGFAEDSTDCPSLNHLQVHESLQAMGSSADSCDSETTVTSFGEDLVTPTAQDQPYFNESEEESLTSLHMGREKAVTIADKKSDGQDFPQCETVESTGSQPPTCSAGAHITEITEMKGDLSPAQPVDLLREASAESDVDKSSEYEFAQYTTHHILKSLASIEAKCSEEGTENTTGPPSSVDRVNTALQRAQMKVCSLSSQRVGRSLLKSKDLLKQRYLFAKAGYPLRRSQSLPTTLLSPVRVVSSVNVRLSPGKETRCSPPSFTYKYTPEEEQKLEKEAIEHDGQSLVKSTIFISPSSLKKETAAQSEANQLEACQQRRTPTCSLYAPAPVSQSTCSLHSAHSEWQERPLCEHMRTLSTHSVPNISGATCSAFTSPFGCPYSHRHAAYPYRPCSVNPPSAIEMQLRRVLHDIRNSLQNLSQYPVMRGPDLAAAPYSPQKSSLLPLYENTFQELQVMRRNLNLFRSQMMDLELAMLRQQTMVYHHMTEEERYEVDQLQSLRNSVRMELQDLELQLDERLLGLEEQLRSVRMPSPFRSSALMGMCGSRSADNLSCPSPLNVMEPVTELMREQSYLKSELGLGLGEMGFEIPPGESSESVFSQATSESSSVCSGPSHANRRTAVPFSDSVGKPKAHLIPSKKVFRASVALTPTAPSRTGSVQTPPEVESSEEVGAVEEALEAVGPKSEVEKEHGKISLLPAAEEIHKNVEQDEFQQVIREIKESIVGEIRREIVSGLLAAVSSSKASNSRQDSH", "length": 1253, "header": "tr|A0A287B737-1|A0A287B737_PIG Isoform 1 of ITPR interacting domain containing 2 OS=Sus scrofa OX=9823 GN=ITPRID2 PE=4 SV=1 CANONICAL=A0A287B737-1" }, "isoforms": [ { "isoform_ac": "A0A287A5U0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A5U0/entry", "sequence": { "sequence": "MDRSLVAEAEEELEWQVASRRRKAWAKCRGSWQASETEDLSTEATTQDEDEDDEEDLPGAKLPAAAGRGNVPNEKIAIWLKDCRTPLGASLDEQNSSTLKGVLVRNGGSFEDDLSLGAEANHLHETDAPIENCNNILAKERRLQFHQKGRSMNSTGSGKSSGTVSSVSELLELYEEDPEEILYNLGFGRDEPDIASKIPSRFFNSSSFARGIDIKVFLSAQMQRMEVENPNYALTSRFRQIEVLTTVANAFSSLYSQVSGTPLQRIGSMSSVASNKEADSPPPLTRSNTANRLMKTLSKLNLCVDKTEKGEGSTPSPATEKGKNLNVSVVEESGIKNDQKSQKIVKKKDSSYMLATVKEEVSGSPAAIMENADIDRPSEEADSNFNQETESGHTQSHENKLGEESGIIETDLGSDSNLSSHSDLENSGEPKSVAMSTTEKEPCAPLTIPSIRNIMAQQKDSFEMEEVQSTEGEVPHVPATYQLGLNKSKRDQLLRTASQHSDSSGFAEDSTDCPSLNHLQVHESLQAMGSSADSCDSETTVTSFGEDLVTPTAQDQPYFNESEEESLTSLHMGREKAVTIADKKSDGQDFPQCETVESTGSQPPTCSAGAHITEITEMKGDLSPAQPVDLLREASAESDVDKSSEYEFAQYTTHHILKSLASIEAKCSEEGTENTTGPPSSVDRVNTALQRAQMKVCSLSSQRVGRSLLKSKDLLKQRYLFAKAGYPLRRSQSLPTTLLSPVRVVSSVNVRLSPGKETRCSPPSFTYKYTPEEEQKLEKEAIEHDGQSLVKSTIFISPSSLKKETAAQSEANQLEACQQRRTPTCSLYAPAPVSQSTCSLHSAHSEWQERPLCEHMRTLSTHSVPNISGATCSAFTSPFGCPYSHRHAAYPYRPCSVNPPSAIEMQLRRVLHDIRNSLQNLSQYPVMRGPDLAAAPYSPQKSSLLPLYENTFQELQVMRRNLNLFRSQMMDLELAMLRQQTMVYHHMTEEERYEVDQLQSLRNSVRMELQDLELQLDERLLGLEEQLRSVRMPSPFRSSALMVTELMREQSYLKSELGLGLGEMGFEIPPGESSESVFSQATSESSSVCSGPSHANRRTAVPFSDSVGKPKAHLIPSKKVFRASVALTPTAPSRTGSVQTPPEVESSEEVGAVEEALEAVGPKSEVEKEHGKISLLPAAEEIHKNVEQDEFQQVIREIKESIVGEIRREIVSGLLAAVSSSKASNSRQDSH", "length": 1231, "header": "tr|A0A287A5U0-1|A0A287B737_PIG Computationally mapped isoform of ITPR interacting domain containing 2 OS=Sus scrofa OX=9823 GN=ITPRID2 PE=4 SV=1 CANONICAL=A0A287B737-1" }, "locus": { "chromosome": "15", "start_pos": 87416121, "end_pos": 87378986, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063031.2", "url": "https://www.ensembl.org/id/ENSSSCT00000063031.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000039127.2", "url": "https://www.ensembl.org/id/ENSSSCP00000039127.2" } ] } }, { "isoform_ac": "A0A287APE8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287APE8/entry", "sequence": { "sequence": "MTTEDQLLRTASQHSDSSGFAEDSTDCPSLNHLQVHESLQAMGSSADSCDSETTVTSFGEDLVTPTAQDQPYFNESEEESLTSLHMGREKAVTIADKKSDGQDFPQCETVESTGSQPPTCSAGAHITEITEMKGDLSPAQPVDLLREASAESDVDKSSEYEFAQYTTHHILKSLASIEAKCSEEGTENTTGPPSSVDRVNTALQRAQMKVCSLSSQRVGRSLLKSKDLLKQRYLFAKAGYPLRRSQSLPTTLLSPVRVVSSVNVRLSPGKETRCSPPSFTYKYTPEEEQKLEKEAIEHDGQSLVKSTIFISPSSLKKETAAQSEANQLEACQQRRTPTCSLYAPAPVSQSTCSLHSAHSEWQERPLCEHMRTLSTHSVPNISGATCSAFTSPFGCPYSHRHAAYPYRPCSVNPPSAIEMQLRRVLHDIRNSLQNLSQYPVMRGPDLAAAPYSPQKSSLLPLYENTFQELQVMRRNLNLFRSQMMDLELAMLRQQTMVYHHMTEEERYEVDQLQSLRNSVRMELQDLELQLDERLLGLEEQLRSVRMPSPFRSSALMGMCGSRSADNLSCPSPLNVMEPVTELMREQSYLKSELGLGLGEMGFEIPPGESSESVFSQATSESSSVCSGPSHANRRTAVPFSDSVGKPKAHLIPSKKVFRASVALTPTAPSRTGSVQTPPEVESSEEVGAVEEALEAVGPKSEVEKEHGKISLLPAAEEIHKNVEQDEFQQVIREIKESIVGEIRREIVSGLLAAVSSSKASNSRQDSH", "length": 767, "header": "tr|A0A287APE8-1|A0A287B737_PIG Computationally mapped isoform of ITPR interacting domain containing 2 OS=Sus scrofa OX=9823 GN=ITPRID2 PE=4 SV=1 CANONICAL=A0A287B737-1" }, "locus": { "chromosome": "15", "start_pos": 87416121, "end_pos": 87397422, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050197.3", "url": "https://www.ensembl.org/id/ENSSSCT00000050197.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045769.1", "url": "https://www.ensembl.org/id/ENSSSCP00000045769.1" } ] } }, { "isoform_ac": "A0A287B2J3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B2J3/entry", "sequence": { "sequence": "MDRSLVAEAEEELEWQVASRRRKAWAKCRGSWQASETEDLSTEATTQDEDEDDEEDLPGAKLPAAAGRGRCARTPLGASLDEQNSSTLKGVLVRNGGSFEDDLSLGAEANHLHETDAPIENCNNILAKERRLQFHQKGRSMNSTGSGKSSGTVSSVSELLELYEEDPEEILYNLGFGRDEPDIASKIPSRFFNSSSFARGIDIKVFLSAQMQRMEVENPNYALTSRFRQIEVLTTVANAFSSLYSQVSGTPLQRIGSMSSVASNKEADSPPPLTRSNTANRLMKTLSKLNLCVDKTEKGEGSTPSPATEKGKNLNVSVVEESGIKNDQKSQKIVKKKDSSYMLATVKEEVSGSPAAIMENADIDRPSEEADSNFNQETESGHTQSHENKLGEESGIIETDLGSDSNLSSHSDLENSGEPKSVAMSTTEKEPCAPLTIPSIRNIMAQQKDSFEMEEVQSTEGEVPHVPATYQLGLNKSKRDQLLRTASQHSDSSGFAEDSTDCPSLNHLQVHESLQAMGSSADSCDSETTVTSFGEDLVTPTAQDQPYFNESEEESLTSLHMGREKAVTIADKKSDGQDFPQCETVESTGSQPPTCSAGAHITEITEMKGDLSPAQPVDLLREASAESDVDKSSEYEFAQYTTHHILKSLASIEAKCSEEGTENTTGPPSSVDRVNTALQRAQMKVCSLSSQRVGRSLLKSKDLLKQRYLFAKAGYPLRRSQSLPTTLLSPVRVVSSVNVRLSPGKETRCSPPSFTYKYTPEEEQKLEKEAIEHDGQSLVKSTIFISPSSLKKETAAQSEANQLEACQQRRTPTCSLYAPAPVSQSTCSLHSAHSEWQERPLCEHMRTLSTHSVPNISGATCSAFTSPFGCPYSHRHAAYPYRPCSVNPPSAIEMQLRRVLHDIRNSLQNLSQYPVMRGPDLAAAPYSPQKSSLLPLYENTFQELQVMRRNLNLFRSQMMDLELAMLRQQTMVYHHMTEEERYEVDQLQSLRNSVRMELQDLELQLDERLLGLEEQLRSVRMPSPFRSSALMGMCGSRSADNLSCPSPLNVMEPVTELMREQSYLKSELGLGLGEMGFEIPPGESSESVFSQATSESSSVCSGPSHANRRTAVPFSDSVGKPKAHLIPSKKVFRASVALTPTAPSRTGSVQTPPEVESSEEVGAVEEALEAVGPKSEVEKEHGKISLLPAAEEIHKNVEQDEFQQVIREIKESIVGEIRREIVSGLLAAVSSSKASNSRQDSH", "length": 1242, "header": "tr|A0A287B2J3-1|A0A287B737_PIG Computationally mapped isoform of ITPR interacting domain containing 2 OS=Sus scrofa OX=9823 GN=ITPRID2 PE=4 SV=1 CANONICAL=A0A287B737-1" }, "locus": { "chromosome": "15", "start_pos": 87416121, "end_pos": 87378986, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056735.2", "url": "https://www.ensembl.org/id/ENSSSCT00000056735.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050626.2", "url": "https://www.ensembl.org/id/ENSSSCP00000050626.2" } ] } }, { "isoform_ac": "A0A287B737-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B737/entry", "sequence": { "sequence": "MDRSLVAEAEEELEWQVASRRRKAWAKCRGSWQASETEDLSTEATTQDEDEDDEEDLPGAKLPAAAGRGNVPNEKIAIWLKDCRTPLGASLDEQNSSTLKGVLVRNGGSFEDDLSLGAEANHLHETDAPIENCNNILAKERRLQFHQKGRSMNSTGSGKSSGTVSSVSELLELYEEDPEEILYNLGFGRDEPDIASKIPSRFFNSSSFARGIDIKVFLSAQMQRMEVENPNYALTSRFRQIEVLTTVANAFSSLYSQVSGTPLQRIGSMSSVASNKEADSPPPLTRSNTANRLMKTLSKLNLCVDKTEKGEGSTPSPATEKGKNLNVSVVEESGIKNDQKSQKIVKKKDSSYMLATVKEEVSGSPAAIMENADIDRPSEEADSNFNQETESGHTQSHENKLGEESGIIETDLGSDSNLSSHSDLENSGEPKSVAMSTTEKEPCAPLTIPSIRNIMAQQKDSFEMEEVQSTEGEVPHVPATYQLGLNKSKRDQLLRTASQHSDSSGFAEDSTDCPSLNHLQVHESLQAMGSSADSCDSETTVTSFGEDLVTPTAQDQPYFNESEEESLTSLHMGREKAVTIADKKSDGQDFPQCETVESTGSQPPTCSAGAHITEITEMKGDLSPAQPVDLLREASAESDVDKSSEYEFAQYTTHHILKSLASIEAKCSEEGTENTTGPPSSVDRVNTALQRAQMKVCSLSSQRVGRSLLKSKDLLKQRYLFAKAGYPLRRSQSLPTTLLSPVRVVSSVNVRLSPGKETRCSPPSFTYKYTPEEEQKLEKEAIEHDGQSLVKSTIFISPSSLKKETAAQSEANQLEACQQRRTPTCSLYAPAPVSQSTCSLHSAHSEWQERPLCEHMRTLSTHSVPNISGATCSAFTSPFGCPYSHRHAAYPYRPCSVNPPSAIEMQLRRVLHDIRNSLQNLSQYPVMRGPDLAAAPYSPQKSSLLPLYENTFQELQVMRRNLNLFRSQMMDLELAMLRQQTMVYHHMTEEERYEVDQLQSLRNSVRMELQDLELQLDERLLGLEEQLRSVRMPSPFRSSALMGMCGSRSADNLSCPSPLNVMEPVTELMREQSYLKSELGLGLGEMGFEIPPGESSESVFSQATSESSSVCSGPSHANRRTAVPFSDSVGKPKAHLIPSKKVFRASVALTPTAPSRTGSVQTPPEVESSEEVGAVEEALEAVGPKSEVEKEHGKISLLPAAEEIHKNVEQDEFQQVIREIKESIVGEIRREIVSGLLAAVSSSKASNSRQDSH", "length": 1253, "header": "tr|A0A287B737-1|A0A287B737_PIG Isoform 1 of ITPR interacting domain containing 2 OS=Sus scrofa OX=9823 GN=ITPRID2 PE=4 SV=1 CANONICAL=A0A287B737-1" }, "locus": { "chromosome": "15", "start_pos": 87416121, "end_pos": 87378986, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046527.2", "url": "https://www.ensembl.org/id/ENSSSCT00000046527.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052334.1", "url": "https://www.ensembl.org/id/ENSSSCP00000052334.1" } ] } }, { "isoform_ac": "A0A287B9G6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9G6/entry", "sequence": { "sequence": "MDRSLVAEAEEELEWQVASRRRKAWAKCRGSWQASETEDLSTEATTQDEDEDDEEDLPGAKLPAAAGRGNVPNEKIAIWLKDCRTPLGASLDEQNSSTLKGVLVRNGGSFEDDLSLGAEANHLHETDAPIENCNNILAKERRLQFHQKGRSMNSTGSGKSSGTVSSVSELLELYEEDPEEILYNLGFGRDEPDIASKIPSRFFNSSSFARGIDIKVFLSAQMQRMEVENPNYALTSRFRQIEVLTTVANAFSSLYSQVSGTPLQRIGSMSSVASNKEADSPPPLTRSNTANRLMKTLSKLNLCVDKTEKGEGSTPSPATEKGKNLNVSVVEESGIKNDQKSQKIVKKKDSSYMLATVKEEVSGSPAAIMENADIDRPSEEADSNFNQETESGHTQSHENKLGEESGIIETDLGSDSNLSSHSDLENSGEPKSVAMSTTEKEPCAPLTIPSIRNIMAQQKDSFEMEEVQSTEGEVPHVPATYQLGLNKSKRDQLLRTASQHSDSSGFAEDSTDCPSLNHLQVHESLQAMGSSADSCDSETTVTSFGEDLVTPTAQDQPYFNESEEESLTSLHMGREKAVTIADKKSDGQDFPQCETVESTGSQPPTCSAGAHITEITEMKGDLSPAQPVDLLREASAESDVDKSSEYEFAQYTTHHILKSLASIEAKCSEEGTENTTGPPSSVDRVNTALQRAQMKVCSLSSQRVGRSLLKSKDLLKQRYLFAKAGYPLRRSQSLPTTLLSPVRVVSSVNVRLSPGKETRCSPPSFTYKYTPEEEQKLEKEAIEHDGQSLVKSTIFISPSSLKKETAAQSEANQLEACQQRRTPTCSLYAPAPVSQSTCSLHSAHSEWQERPLCEHMRTLSTHSVPNISGATCSAFTSPFGCPYSHRHAAYPYRPCSVNPPSAIEMQLRRVLHDIRNSLQNLSQYPVMRGPDLAAAPYSPQKSSLLPLYENTFQELQVMRRNLNLFRSQMMDLELAMLRQQTMVYHHMTEEERYEVDQLQSLRNSVRMELQDLELQLDERLLGLEEQLRSVRMPSPFRSSALMGMCGSRSADNLSCPSPLNVMEPVTELMREQSYLKSELGLGLGEMGFEIPPGESSESVFSQATSESSSVCSGPSHANRRTAVPFSDSVGKPKAHLIPSKKVFRASVALTPTAPSRTGSVQTPPEVESSEEVGAVEEALEAVGPKSEVEKEHGKISLLPAAEEIHKNVEQDEFQQVIREVGMGPISCLMLKLPVVDTGGGVICASEDTCC", "length": 1250, "header": "tr|A0A287B9G6-1|A0A287B9G6_PIG Computationally mapped isoform of ITPR interacting domain containing 2 OS=Sus scrofa OX=9823 GN=ITPRID2 PE=4 SV=2 CANONICAL=A0A287B737-1" }, "locus": { "chromosome": "15", "start_pos": 87417036, "end_pos": 87378986, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044143.3", "url": "https://www.ensembl.org/id/ENSSSCT00000044143.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052974.2", "url": "https://www.ensembl.org/id/ENSSSCP00000052974.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 314, "start_aa": "Thr", "end_pos": 314, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr314", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287A5U0", "url": "https://www.uniprot.org/uniprotkb/A0A287A5U0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "signaling receptor binding", "id": "GO:0005102", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005102", "evidence": [ { "database": "UniProtKB", "id": "A0A287B737", "url": "https://www.uniprot.org/uniprotkb/A0A287B737" } ], "pmid": "" }, { "name": "actin filament binding", "id": "GO:0051015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051015", "evidence": [ { "database": "UniProtKB", "id": "A0A287B737", "url": "https://www.uniprot.org/uniprotkb/A0A287B737" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A287B737", "url": "https://www.uniprot.org/uniprotkb/A0A287B737" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1052, "end_pos": 1054, "annotation": "n_glycosylation_sequon" }, { "start_pos": 153, "end_pos": 155, "annotation": "n_glycosylation_sequon" }, { "start_pos": 204, "end_pos": 206, "annotation": "n_glycosylation_sequon" }, { "start_pos": 326, "end_pos": 328, "annotation": "n_glycosylation_sequon" }, { "start_pos": 417, "end_pos": 419, "annotation": "n_glycosylation_sequon" }, { "start_pos": 486, "end_pos": 488, "annotation": "n_glycosylation_sequon" }, { "start_pos": 560, "end_pos": 562, "annotation": "n_glycosylation_sequon" }, { "start_pos": 674, "end_pos": 676, "annotation": "n_glycosylation_sequon" }, { "start_pos": 866, "end_pos": 868, "annotation": "n_glycosylation_sequon" }, { "start_pos": 920, "end_pos": 922, "annotation": "n_glycosylation_sequon" }, { "start_pos": 95, "end_pos": 97, "annotation": "n_glycosylation_sequon" } ], 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} ] } ], "protein_names": [ { "name": "RING finger protein 44 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_005661522", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005661522" } ] }, { "name": "Ring finger protein 44", "type": "synonym", "evidence": [ { "id": "A0A287B8W4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B8W4/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B8W4", "url": "https://www.uniprot.org/uniprotkb/A0A287B8W4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RNF44", "url": "https://www.uniprot.org/uniprotkb/A0A287B8W4", "locus": { "chromosome": "2", "start_pos": 81390230, "end_pos": 81378725, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000014056", "url": "https://www.ensembl.org/id/ENSSSCG00000014056" } ] } } ], "crossref": [ { "id": "ENSSSCG00000014056", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000014056", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd16680", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd16680", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100523538", "url": "https://www.ncbi.nlm.nih.gov/gene/100523538", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001841", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001841", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "MSSEHFV", "url": "https://omabrowser.org/oma/group/MSSEHFV/", "database": "OMA", "categories": [ "Protein 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"MQPWALAVTRWPPSAPVGQRRFSAGTSSHPGQLRGSPSREGPLASPPAQDERLPSQQPPPRPAHLPVEERRALAPAGGSPRMLHPTSQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVPYQAYPHLISSDHYILHPPPPAPHPQPTHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRGDQHPLGSFTYSTSAPGPTLSPSVPLHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFHPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASEVPREAE", "length": 432, "header": "tr|A0A287B8W4-1|A0A287B8W4_PIG Isoform 1 of Ring finger protein 44 OS=Sus scrofa OX=9823 GN=RNF44 PE=4 SV=2 CANONICAL=A0A287B8W4-1" }, "isoforms": [ { "isoform_ac": "A0A287A624-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A624/entry", "sequence": { "sequence": "MQPWALAVTRWPPSAPVGQRRFSAGTSSHPGQLRGSPSREGPLASPPAQDERLPSQQPPPRPAHLPVEERRALAPAGGSPRMLHPTSQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPQLPVPYQAYPHLISSDHYILHPPPPAPHPQPTHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRGDQHPLGSFTYSTSAPGPTLSPSVPLHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFHPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASEVPREAE", "length": 424, "header": "tr|A0A287A624-1|A0A287B8W4_PIG Computationally mapped isoform of Ring finger protein 44 OS=Sus scrofa OX=9823 GN=RNF44 PE=4 SV=1 CANONICAL=A0A287B8W4-1" }, "locus": { "chromosome": "2", "start_pos": 81387903, "end_pos": 81384691, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060557.3", "url": "https://www.ensembl.org/id/ENSSSCT00000060557.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000039424.2", "url": "https://www.ensembl.org/id/ENSSSCP00000039424.2" } ] } }, { "isoform_ac": "A0A287B8W4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B8W4/entry", "sequence": { "sequence": "MQPWALAVTRWPPSAPVGQRRFSAGTSSHPGQLRGSPSREGPLASPPAQDERLPSQQPPPRPAHLPVEERRALAPAGGSPRMLHPTSQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVPYQAYPHLISSDHYILHPPPPAPHPQPTHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRGDQHPLGSFTYSTSAPGPTLSPSVPLHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFHPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASEVPREAE", "length": 432, "header": "tr|A0A287B8W4-1|A0A287B8W4_PIG Isoform 1 of Ring finger protein 44 OS=Sus scrofa OX=9823 GN=RNF44 PE=4 SV=2 CANONICAL=A0A287B8W4-1" }, "locus": { "chromosome": "2", "start_pos": 81387903, "end_pos": 81384691, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038286.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038286.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052769.2", "url": "https://www.ensembl.org/id/ENSSSCP00000052769.2" } ] } }, { "isoform_ac": "F1S3A0-1", "url": "https://www.uniprot.org/uniprotkb/F1S3A0/entry", "sequence": { "sequence": "MTHPSREGPLASPPAQDERLPSQQPPPRPAHLPVEERRALAPAGGSPRMLHPTSQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVPYQAYPHLISSDHYILHPPPPAPHPQPTHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRGDQHPLGSFTYSTSAPGPTLSPSVPLHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFHPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASEVPREAE", "length": 399, "header": "tr|F1S3A0-1|A0A287B8W4_PIG Computationally mapped isoform of Ring finger protein 44 OS=Sus scrofa OX=9823 GN=RNF44 PE=4 SV=3 CANONICAL=A0A287B8W4-1" }, "locus": { "chromosome": "2", "start_pos": 81387903, "end_pos": 81378935, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000015355.5", "url": "https://www.ensembl.org/id/ENSSSCT00000015355.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014947.4", "url": "https://www.ensembl.org/id/ENSSSCP00000014947.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 244, "start_aa": "Thr", "end_pos": 244, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr244", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S3A0", "url": "https://www.uniprot.org/uniprotkb/F1S3A0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0AAA9T1D0-1", "protein_name": "Ring finger protein 44", "gene_name": "RNF44", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MQPWALAVTRWAPSAPGGQRRFPAGPSSSPGQLWGSPSHEGPLASLPAQDERFPSQQLPPRPAHLPVEERRASAPAGGSPRMLHPVSQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPAGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPQLIQACTMQQLPVPYQAYPHLISSDHYILHPPPPAPHPQPAHMAPLGQFMSLQTQHPRMPLQRLDNDVDLRGDQHPLGSFTYSTSAPGPTLSASVPMHYLPHDTLHHELSFGVPYSHVMPRRLSTQRYRLQQPLPPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFHPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASEVPREAE", "length": 433 }, "evidence": [ { "id": "A0A287B8W4", "url": "https://omabrowser.org/oma/group/A0A287B8W4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q08CG8-1", "protein_name": "RING finger protein 44", "gene_name": "rnf44", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRPWEVAVSRRPTTAPLNQRRLVGEPCITPLHLRRSPPVRHQWGQRDRPALHTSLHQDENFHHAVFSQHQQVPLDESRQYSHSGAAPRMLHTANQPPQQSSIMVDLHEQMHQGSVPISYTVTTVTTHGFPIHTGQPIPACNAQQLPACSVMFSGQLSLLCCLPPPLIQACTMQHLPVSYQAFPPLISSEHFILHPSPAVAPHQPPPHPPHPPPPHLPPINQFVPIQPQHPRMPLQRVENEVDLRGDQHPLGTFSYPPAHHPPALTPSVPLQYLPQETLHQELPYPVPYPHMLPRRITGQRYRLQQPLPPPPPPPPYYPGFLPYFLSMLPVPPTAVGPAISLDLDVDDVEMENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNLENHQSEQTLCVVCFSDFESRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICRADASEVHRDVE", "length": 448 }, "evidence": [ { "id": "A0A287B8W4", "url": "https://omabrowser.org/oma/group/A0A287B8W4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q3UHJ8-1", "protein_name": "RING finger protein 44", "gene_name": "Rnf44", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRPWTLAVTKWPPSAPVGHWRVSTRLSSSPGQLWGRPSNLSVEEHRASAPAGRSPRMLHPATQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPTSQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPQLIQACTMQQLPGPYHTYPHLISSDHYILHPPPPAPPPQPTHMAPLGQFVSLQTQHPRMPLQRLDNEMDLRGDQHPLGSFTYSTSATGPALSPSVPLHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPPPSYYPSFLPYFLSMLPMSPTTVGPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVPREAE", "length": 407 }, "evidence": [ { "id": "A0A287B8W4", "url": "https://omabrowser.org/oma/group/A0A287B8W4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q4V7B8-1", "protein_name": "RING finger protein 44", "gene_name": "Rnf44", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLHPATQQSPFMVDLHDQVHQGPVPLSYTVTTVTTQGFPLPASQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVPYHTYPHLISSDHYILHPPPPAPPPQPTHMAPLGQFVSLQTQHPRMPLQRLDNEMDLRGDQHPLGSFTYSTSATGPTLSPSVPLHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPPPSYYPSFLPYFLSMLPMSPTTVGPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVPREAE", "length": 350 }, "evidence": [ { "id": "A0A287B8W4", "url": "https://omabrowser.org/oma/group/A0A287B8W4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7L0R7-1", "protein_name": "RING finger protein 44", "gene_name": "RNF44", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRPWALAVTRWPPSAPVGQRRFSAGPGSTPGQLWGSPGLEGPLASPPARDERLPSQQPPSRPPHLPVEERRASAPAGGSPRMLHPATQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVPYQAYPHLISSDHYILHPPPPAPPPQPTHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRGDQPSLGSFTYSTSAPGPALSPSVPLHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASEVPREAE", "length": 432 }, "evidence": [ { "id": "A0A287B8W4", "url": "https://omabrowser.org/oma/group/A0A287B8W4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "R4GIU9-1", "protein_name": "Ring finger protein 44", "gene_name": "RNF44", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MRPWELAVNRRPPSAPFNQRRFSGGPCSSPDHLRRSPPARRQWGRRDRPLATLLGQDDTQLHPAFPQQPHIPVDEPRAYALPSTPPRMLHPAAHPPHQNPFMVDLHDQVHQGPVPLSYTVTTVTTQGFPIHTSQHIPGCSTQQLPACSVMFSGQHYPLCCLPPPLIQACAMQQLPVSYQTFPPIISSDHYILHPPPPPVPPHQPPHMAPLGQFVPLQAQHPRMPLQRIDNDVDLRGEQHPIAGFTYPPSHHAPTLSPSVPLHYLPHDPLHQELPFGVPYPHMMPRRLNTQRYRLQQALPPPPPPPPPPPYYPSFLPYFLSMLPVSPTAVGPTISLDLDVDDVEMENYEALLNLAERLGEAKPRGLTKADIEHLPSYRFNPESHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVQREAD", "length": 442 }, "evidence": [ { "id": "A0A287B8W4", "url": "https://omabrowser.org/oma/group/A0A287B8W4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A287B8W4", "url": "https://www.uniprot.org/uniprotkb/A0A287B8W4" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "A0A287B8W4", "url": "https://www.uniprot.org/uniprotkb/A0A287B8W4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "A0A287B8W4", "url": "https://www.uniprot.org/uniprotkb/A0A287B8W4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 414, "end_pos": 416, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287B8W4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B8W4" }, { "id": "PS50089", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50089" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RING-type", "eco_id": "ECO_0000259", "start_pos": 380, "end_pos": 421, "start_aa": "Cys", "end_aa": "Arg", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 244 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 414, "end_pos": 416 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B9D5-1", "uniprot_ac": "A0A287B9D5", "uniprot_id": "A0A287B9D5_PIG", "mass": { "chemical_mass": 80680.0, "monoisotopic_mass": 80680.0 }, "refseq": { "ac": "XP_020920231", "name": "zinc finger protein 782 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920231" }, "gene_names": [ { "name": "ZNF782", "type": "recommended", "evidence": [ { "id": "A0A287B9D5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B9D5" } ] }, { "name": "ZNF782", "type": "synonym", "evidence": [ { "id": "XP_020920231", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920231" } ] } ], "protein_names": [ { "name": "Zinc finger protein 782", "type": "synonym", "evidence": [ { "id": "A0A287B9D5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B9D5/entry#names_and_taxonomy" } ] }, { "name": "zinc finger protein 782 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020920231", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920231" } ] } ], "function": [ { "annotation": "May be involved in transcriptional regulation.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B9D5", "url": "https://www.uniprot.org/uniprotkb/A0A287B9D5#function" }, { "database": "UniProtKB", "id": "ARBA00003767", "url": "https://www.uniprot.org/uniprotkb/ARBA00003767#function" }, { "database": "UniProtKB", "id": "A0A287A6C7", "url": "https://www.uniprot.org/uniprotkb/A0A287A6C7#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B9D5", "url": "https://www.uniprot.org/uniprotkb/A0A287B9D5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZNF782", "url": "https://www.uniprot.org/uniprotkb/A0A287B9D5", "locus": { "chromosome": "10", "start_pos": 25341575, "end_pos": 25283987, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011167", "url": "https://www.ensembl.org/id/ENSSSCG00000011167" } ] } } ], "crossref": [ { "id": "A0A287B9D5", "url": "https://alphafold.ebi.ac.uk/entry/A0A287B9D5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000011167", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011167", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07765", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07765", "database": 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"database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020920231", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920231", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287A6C7", "url": "https://www.uniprot.org/uniprotkb/A0A287A6C7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A6C7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A6C7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9D5", "url": "https://www.uniprot.org/uniprotkb/A0A287B9D5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9D5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9D5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNIPQAAVSFKDVTVAFTQEEWQQLDSAQRTLYRDVTLENYSHLVSVGYCFTKPELIFMLEQGDDPWLLEKEFVKRRSPEEYQPDELLERSLENHGKHLKQVLFTNKSLTTEQEISGKPCNLEINIFPANTMPCKFDSTGSTYFLRNSLAPHCQFSRKKTHVCEKLLLSVKDGRTNTGEKSFAYTSSVKASRHKDKVIQHQTIQTLRQAFKYNECGKDFLEKTTIATPKSTHPKVKSYKFNKFGENQCDKSTLIVSQSNHPEEKSHYEFSKYECTENGNNFSRNTQRTDTEGESFSQKLHIREQQKINLGVKPFEYGKNFSHNSALPVLQQIHAIDQSSDYDTCTETLGYQSTFSVHHRTPITVKPCECNERGKSCTMTSRLIQLPKSHTEKPYECHECGKAFSEKSRLRKHQRTHTGEKPYKCDGCEKTFSAKSGLRIHQRIHTGEKPFGCNECGKSFNYKSILIVHQRTHTGEKPFECSECGKSFSHLSGLRNHQRTHTGERPYKCDECGKAFKLKSGLKKHHRTHTGEKPYKCNQCGKAFGQKSQLRGHHRIHTGEKPYKCNHCGEAFRQKSNLRVHHRTHTGEKPYKCDECGKTFRQKSNLRGHQRTHTGEKPYECNECGKAFIERSVLRKHQRIHTGEKPYNCNHCGEAFSQKSNLSVHQRTHTGEKPYKCDKCEKTFSQKSSLREHQKSHMGN", "length": 699, "header": "tr|A0A287B9D5-1|A0A287B9D5_PIG Isoform 1 of Zinc finger protein 782 OS=Sus scrofa OX=9823 GN=ZNF782 PE=3 SV=1 CANONICAL=A0A287B9D5-1" }, "isoforms": [ { "isoform_ac": "A0A287A6C7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A6C7/entry", "sequence": { "sequence": "MTPPLEASRLMTLGSLDSLEKNKLHHSSQPSQEHKMNIPQAAVSFKDVTVAFTQEEWQQLDSAQRTLYRDVTLENYSHLVSVGYCFTKPELIFMLEQGDDPWLLEKEFVKRRSPEEYQPDELLERSLENHGKHLKQVLFTNKSLTTEQEISGKPCNLEINIFPANTMPCKFDSTGSTYFLRNSLAPHCQFSRKKTHVCEKLLLSVKDGRTNTGEKSFAYTSSVKASRHKDKVIQHQTIQTLRQAFKYNECGKDFLEKTTIATPKSTHPKVKSYKFNKFGENQCDKSTLIVSQSNHPEEKSHYEFSKYECTENGNNFSRNTQRTDTEGESFSQKLHIREQQKINLGVKPFEYGKNFSHNSALPVLQQIHAIDQSSDYDTCTETLGYQSTFSVHHRTPITVKPCECNERGKSCTMTSRLIQLPKSHTEKPYECHECGKAFSEKSRLRKHQRTHTGEKPYKCDGCEKTFSAKSGLRIHQRIHTGEKPFGCNECGKSFNYKSILIVHQRTHTGEKPFECSECGKSFSHLSGLRNHQRTHTGERPYKCDECGKAFKLKSGLKKHHRTHTGEKPYKCNQCGKAFGQKSQLRGHHRIHTGEKPYKCNHCGEAFRQKSNLRVHHRTHTGEKPYKCDECGKTFRQKSNLRGHQRTHTGEKPYECNECGKAFIERSVLRKHQRIHTGEKPYNCNHCGEAFSQKSNLSVHQRTHTGEKPYKCDKCEKTFSQKSSLREHQKSHMGN", "length": 734, "header": "tr|A0A287A6C7-1|A0A287B9D5_PIG Computationally mapped isoform of Zinc finger protein 782 OS=Sus scrofa OX=9823 GN=ZNF782 PE=3 SV=1 CANONICAL=A0A287B9D5-1" }, "locus": { "chromosome": "10", "start_pos": 25339158, "end_pos": 25285556, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062281.1", "url": "https://www.ensembl.org/id/ENSSSCT00000062281.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000039355.1", "url": "https://www.ensembl.org/id/ENSSSCP00000039355.1" } ] } }, { "isoform_ac": "A0A287B9D5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9D5/entry", "sequence": { "sequence": "MNIPQAAVSFKDVTVAFTQEEWQQLDSAQRTLYRDVTLENYSHLVSVGYCFTKPELIFMLEQGDDPWLLEKEFVKRRSPEEYQPDELLERSLENHGKHLKQVLFTNKSLTTEQEISGKPCNLEINIFPANTMPCKFDSTGSTYFLRNSLAPHCQFSRKKTHVCEKLLLSVKDGRTNTGEKSFAYTSSVKASRHKDKVIQHQTIQTLRQAFKYNECGKDFLEKTTIATPKSTHPKVKSYKFNKFGENQCDKSTLIVSQSNHPEEKSHYEFSKYECTENGNNFSRNTQRTDTEGESFSQKLHIREQQKINLGVKPFEYGKNFSHNSALPVLQQIHAIDQSSDYDTCTETLGYQSTFSVHHRTPITVKPCECNERGKSCTMTSRLIQLPKSHTEKPYECHECGKAFSEKSRLRKHQRTHTGEKPYKCDGCEKTFSAKSGLRIHQRIHTGEKPFGCNECGKSFNYKSILIVHQRTHTGEKPFECSECGKSFSHLSGLRNHQRTHTGERPYKCDECGKAFKLKSGLKKHHRTHTGEKPYKCNQCGKAFGQKSQLRGHHRIHTGEKPYKCNHCGEAFRQKSNLRVHHRTHTGEKPYKCDECGKTFRQKSNLRGHQRTHTGEKPYECNECGKAFIERSVLRKHQRIHTGEKPYNCNHCGEAFSQKSNLSVHQRTHTGEKPYKCDKCEKTFSQKSSLREHQKSHMGN", "length": 699, "header": "tr|A0A287B9D5-1|A0A287B9D5_PIG Isoform 1 of Zinc finger protein 782 OS=Sus scrofa OX=9823 GN=ZNF782 PE=3 SV=1 CANONICAL=A0A287B9D5-1" }, "locus": { "chromosome": "10", "start_pos": 25339158, "end_pos": 25286986, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047298.2", "url": "https://www.ensembl.org/id/ENSSSCT00000047298.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053138.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053138.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287A6C7", "url": "https://www.uniprot.org/uniprotkb/A0A287A6C7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:102164376", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102164376", "resource": "KEGG Pathway" }, { "id": "R-SSC-212436", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "resource": "Reactome", "description": "Generic Transcription Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q6ZMW2-1", "protein_name": "Zinc finger protein 782", "gene_name": "ZNF782", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"url": "https://www.uniprot.org/uniprotkb/A0A287B9D5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A287B9D5", "url": "https://www.uniprot.org/uniprotkb/A0A287B9D5" } ], "pmid": "" }, { "name": "sequence-specific double-stranded DNA binding", "id": "GO:1990837", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990837", "evidence": [ { "database": "UniProtKB", "id": "A0A287B9D5", "url": "https://www.uniprot.org/uniprotkb/A0A287B9D5" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "A0A287B9D5", "url": "https://www.uniprot.org/uniprotkb/A0A287B9D5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 106, "end_pos": 108, 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"https://www.ebi.ac.uk/interpro/entry/pfam/PF00008", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02210", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02210", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6794361", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6794361", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287A8G6", "url": "https://www.uniprot.org/uniprotkb/A0A287A8G6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A8G6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A8G6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BBP3", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BBP3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R712", 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"MGTALLQRGGCFLLCLSLLLLGCWAELGNGLEFPGAEGQWTRFPKWNACCESEMSFQLKTRSARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDGAWHSVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASVREREPFKGWIRDVRVNSSQALPVDSGEVKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQEDNNVEGLAHLMMGDQGKSKGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDELYLGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEVQSTAGVKPSCSRETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLGKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIADPVTFKTKSSYVALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEVALMKADLQGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDRKYLSECGLMLVVASSHCLIPRD", 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"MLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDELYLGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEVQSTAGVKPSCSRETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLGKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIADPVTFKTKSSYVALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDRKYLSECGLMLVVASSHCLIPRD", "length": 807, "header": "tr|A0A287A8G6-1|A0A287BBP3_PIG Computationally mapped isoform of Neurexin-1 OS=Sus scrofa OX=9823 GN=NRXN1 PE=1 SV=1 CANONICAL=A0A287BBP3-1" }, "locus": { "chromosome": "3", "start_pos": 90381647, "end_pos": 90222166, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054247.3", "url": "https://www.ensembl.org/id/ENSSSCT00000054247.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000040081.1", "url": "https://www.ensembl.org/id/ENSSSCP00000040081.1" } ] } }, { "isoform_ac": "A0A287BBP3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP3/entry", "sequence": { "sequence": "MGTALLQRGGCFLLCLSLLLLGCWAELGNGLEFPGAEGQWTRFPKWNACCESEMSFQLKTRSARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDGAWHSVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASVREREPFKGWIRDVRVNSSQALPVDSGEVKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQEDNNVEGLAHLMMGDQGKSKGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDELYLGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEVQSTAGVKPSCSRETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLGKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIADPVTFKTKSSYVALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEVALMKADLQGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDRKYLSECGLMLVVASSHCLIPRD", "length": 1144, "header": "tr|A0A287BBP3-1|A0A287BBP3_PIG Isoform 1 of Neurexin-1 OS=Sus scrofa OX=9823 GN=NRXN1 PE=1 SV=3 CANONICAL=A0A287BBP3-1" }, "locus": { "chromosome": "3", "start_pos": 90381647, "end_pos": 89803718, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060996.3", "url": "https://www.ensembl.org/id/ENSSSCT00000060996.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053495.3", "url": "https://www.ensembl.org/id/ENSSSCP00000053495.3" } ] } }, { "isoform_ac": "A0A5G2R712-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R712/entry", "sequence": { "sequence": "MGTALLQRGGCFLLCLSLLLLGCWAELGNGLEFPGAEGQWTRFPKWNACCESEMSFQLKTRSARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDGAWHSVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASVREREPFKGWIRDVRVNSSQALPVDSGEVKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVNIAITGIIPNSWSHHFRSRLKAPLLKTRCFGVKGHNLNIPPLLL", "length": 457, "header": "tr|A0A5G2R712-1|A0A287BBP3_PIG Computationally mapped isoform of Neurexin-1 OS=Sus scrofa OX=9823 GN=NRXN1 PE=1 SV=2 CANONICAL=A0A287BBP3-1" }, "locus": { "chromosome": "3", "start_pos": 90225774, "end_pos": 89803718, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069240.2", "url": "https://www.ensembl.org/id/ENSSSCT00000069240.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073042.2", "url": "https://www.ensembl.org/id/ENSSSCP00000073042.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R712", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R712" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-6794361", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6794361", "resource": "Reactome", "description": "Neurexins and neuroligins" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 14, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBP3", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP3" } ], "pmid": "" }, { "name": "glutamatergic synapse", "id": "GO:0098978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098978", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBP3", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP3" } ], "pmid": "" }, { "name": "GABA-ergic synapse", "id": "GO:0098982", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098982", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBP3", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP3" } ], "pmid": "" }, { "name": "presynaptic active zone membrane", "id": "GO:0048787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048787", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBP3", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP3" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBP3", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP3" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBP3", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP3" } ], "pmid": "" }, { "name": "cell surface", "id": "GO:0009986", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009986", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBP3", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP3" } ], "pmid": "" }, { "name": "nuclear membrane", "id": "GO:0031965", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031965", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBP3", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP3" } ], "pmid": "" }, { "name": "neuronal cell body", "id": "GO:0043025", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043025", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBP3", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP3" } ], "pmid": "" }, { "name": "vesicle", "id": "GO:0031982", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031982", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBP3", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP3" } ], "pmid": "" }, { "name": "cell projection", "id": "GO:0042995", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042995", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBP3", "url": "https://www.uniprot.org/uniprotkb/A0A287BBP3" } ], "pmid": "" }, { "name": "Schaffer collateral - CA1 synapse", "id": "GO:0098685", 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"sequence": "MDSLCSSWFPTQNLMFQISLILAIPSPASQTVSDPSSSCTLKRTVGESVQLQLNSSLDPNIREIEWNLDSEDDERTQILVSWNPNTLNPDWYDLEEEFKCRFSLTEMAFLSIRNLTMEMSGLYTARIKFRSGKSQEETFRLCLYEPIPHPQIQIHSLSNTSGWCHISLECGTPGNTGNLMVTWQSQGLPKELEQSGTLGPSPSSRNLSLSLPLSHFNSRLTCVVSNPVDEKKETLYLESICPRRGFLQGKWLWRGILPTVLMMSLGAGVWLWMRKKMDTGRAGSTFPPVVPGSAATPQVLPTETSADLQTGGANSHDPAYEEIGLLRHHKKDTEKGSCHSDGPEQTLSIHTVYEKIRTSPDLQRDT", "length": 366, "header": "tr|A0A287B9V9-1|A0A287B9V9_PIG Isoform 1 of Ig-like domain-containing protein OS=Sus scrofa OX=9823 GN=LOC110260316 PE=4 SV=1 CANONICAL=A0A287B9V9-1" }, "locus": { "chromosome": "4", "start_pos": 92741115, "end_pos": 92714822, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066263.3", "url": "https://www.ensembl.org/id/ENSSSCT00000066263.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053284.1", "url": "https://www.ensembl.org/id/ENSSSCP00000053284.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287A8J5", "url": "https://www.uniprot.org/uniprotkb/A0A287A8J5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:110260316", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110260316", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A287B9V9", "url": "https://www.uniprot.org/uniprotkb/A0A287B9V9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "immune response", "id": "GO:0006955", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006955", "evidence": [ { "database": "UniProtKB", "id": "A0A287B9V9", "url": "https://www.uniprot.org/uniprotkb/A0A287B9V9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 114, "end_pos": 116, "annotation": "n_glycosylation_sequon" }, { "start_pos": 159, "end_pos": 161, "annotation": "n_glycosylation_sequon" }, { "start_pos": 206, "end_pos": 208, "annotation": "n_glycosylation_sequon" }, { "start_pos": 54, "end_pos": 56, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287B9V9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B9V9" }, { "id": "PS50835", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50835" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ig-like", "eco_id": "ECO_0000259", "start_pos": 150, "end_pos": 234, "start_aa": "Pro", "end_aa": "Thr", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 114, "end_pos": 116 }, { "start_pos": 159, "end_pos": 161 }, { "start_pos": 206, "end_pos": 208 }, { "start_pos": 54, "end_pos": 56 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B6B6-1", "uniprot_ac": "A0A287B6B6", "uniprot_id": "A0A287B6B6_PIG", "mass": { "chemical_mass": 85758.0, "monoisotopic_mass": 85758.0 }, "refseq": { "ac": "XP_020928245", "name": "ensconsin isoform X7", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020928245" }, "gene_names": [ { "name": "MAP7", "type": "recommended", "evidence": [ { "id": "A0A287B6B6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B6B6" } ] }, { "name": "MAP7", "type": "synonym", "evidence": [ { "id": "XP_020928245", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020928245" } ] } ], "protein_names": [ { "name": "Microtubule associated protein 7", "type": "synonym", "evidence": [ { "id": "A0A287B6B6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B6B6/entry#names_and_taxonomy" } ] }, { "name": "ensconsin isoform X7", "type": "synonym", "evidence": [ { "id": "XP_020928245", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020928245" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B6B6", "url": "https://www.uniprot.org/uniprotkb/A0A287B6B6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MAP7", "url": "https://www.uniprot.org/uniprotkb/A0A287B6B6", "locus": { "chromosome": "1", "start_pos": 27782747, "end_pos": 27606036, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000039049", "url": "https://www.ensembl.org/id/ENSSSCG00000039049" } ] } } ], "crossref": [ { "id": "A0A287B6B6", "url": "https://alphafold.ebi.ac.uk/entry/A0A287B6B6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000039049", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000039049", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100514082", "url": "https://www.ncbi.nlm.nih.gov/gene/100514082", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR008604", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008604", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051483", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051483", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ISALPCM", "url": "https://omabrowser.org/oma/group/ISALPCM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR15073", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15073", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15073:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15073:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05672", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05672", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020928245", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020928245", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AAD2", "url": "https://www.uniprot.org/uniprotkb/A0A287AAD2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AAD2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AAD2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6B6", "url": "https://www.uniprot.org/uniprotkb/A0A287B6B6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6B6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6B6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9U0", "url": "https://www.uniprot.org/uniprotkb/A0A287B9U0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9U0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9U0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BN26", "url": "https://www.uniprot.org/uniprotkb/A0A287BN26", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BN26-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BN26-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R4E1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4E1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R4E1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4E1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RB61", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RB61", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RB61-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RB61-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FK61", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FK61", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FK61-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FK61-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FKM5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FKM5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FKM5-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FKM5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPGSATALRQERLKKTNARPVPLGLFTINEEDEQQKNGNSRRPKAPDGNKVQDKKIAPSNRSSSAISGQNSNHSGSKPDPPPVLRVDDRQRLARERREEREKQLAAREIIWLEREERARQHYEKHLEERKKKLEEQRLKEERRRAAVEEKRRQRLEEDKERHEAVVRRTMERSQKPKQKHNRWSWGGPLHGSPSIHSTDPDRRSVSTMNLSKHVDPVISKRLSSSSATLLNSPDRARRLQLSPWESSVVNRLLTPTHSFLARSKSTAALSGDTASCSPINIMPYKAAHSRNPMERPKFFVTPPEGSARRRTVHGTAGYKRERERENIPFHLTSGARRALSPSHPKARSPASSRLWLPSKSFPHLPGTPRPAPSAPPGSVKAAPAQARPPSPGNIRPIKREVRVEPERKDPDKEPQKVANESSLKARAPLVKVEEATVEDTTPVEPEAAPAAPAAAPGPGPAPGPAPGPAPAPSSTVTASASPKTSAGTTDPEEATRLLAEKRRLAREQREKEEREKREKEELERQKREELAQKVAEERTRREEEARQLEAEQAREKEEQLRRQEEERARREQEEVERVQKQKEEEARVREAAERVRQEREKHFQREEQERLERKKRLEEIMKRTRRTEASDKKIVDQRNGDIAKGALTGGTVSALPCVTNSPGQGEPVTSPHVATSHQSKVTLESTPNLEKQPNENGVSVSNENFEEIINLPIGSKQSRLDVTNSESPDIPLNPILAFEDEGSLGPLPQVDGVQTQQTAEVI", "length": 762, "header": "tr|A0A287B6B6-1|A0A287B6B6_PIG Isoform 1 of Microtubule associated protein 7 OS=Sus scrofa OX=9823 GN=MAP7 PE=1 SV=3 CANONICAL=A0A287B6B6-1" }, "isoforms": [ { "isoform_ac": "A0A287AAD2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AAD2/entry", "sequence": { "sequence": "MADLGAGGDSHRGGDGAAHSETAPDGNKVQDKKIAPSNRSSSAISGQNSNHSGSKPDPPPVLRVDDRQRLARERREEREKQLAAREIIWLEREERARQHYEKHLEERKKKLEEQRLKEERRRAAVEEKRRQRLEEDKERHEAVVRRTMERSQKPKQKHNRWSWGGPLHGSPSIHSTDPDRRSVSTMNLSKHVDPVISKRLSSSSATLLNSPDRARRLQLSPWESSVVNRLLTPTHSFLARSKSTAALSGDTASCSPINIMPYKAAHSRNPMERPKFFVTPPEGSARRRTVHGTAGYKRERERENIPFHLTSGARRALSPSHPKARSPASSRLWLPSKSFPHLPGTPRPAPSAPPGSVKAAPAQARPPSPGNIRPIKREVRVEPERKDPDKEPQKVANESSLKARAPLVKVEEATVEDTTPVEPEAAPAAPAAAPGPGPAPGPAPGPAPAPSSTVTASASPKTSAGTTDPEEATRLLAEKRRLAREQREKEEREKREKEELERQKREELAQKVAEERTRREEEARQLEAEQAREKEEQLRRQEEERARREQEEVERVQKQKEEEARVREAAERVRQEREKHFQREEQERLERKKRLEEIMKRTRRTEASDKKIVDQRNGDIAKGALTGGTAVSALPCVTNSPGQGEPVTSPHVATSHQSKVTLESTPNLEKQPNENGVSVSNENFEEIINLPIGSKQSRLDVTNSESPDIPLNPILAFEDEGSLGPLPQVDGVQTQQTAEVI", "length": 741, "header": "tr|A0A287AAD2-1|A0A287B6B6_PIG Computationally mapped isoform of Microtubule associated protein 7 OS=Sus scrofa OX=9823 GN=MAP7 PE=1 SV=3 CANONICAL=A0A287B6B6-1" }, "locus": { "chromosome": "1", "start_pos": 27781277, "end_pos": 27606095, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046954.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046954.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000040900.3", "url": "https://www.ensembl.org/id/ENSSSCP00000040900.3" } ] } }, { "isoform_ac": "A0A287B6B6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6B6/entry", "sequence": { "sequence": "MPGSATALRQERLKKTNARPVPLGLFTINEEDEQQKNGNSRRPKAPDGNKVQDKKIAPSNRSSSAISGQNSNHSGSKPDPPPVLRVDDRQRLARERREEREKQLAAREIIWLEREERARQHYEKHLEERKKKLEEQRLKEERRRAAVEEKRRQRLEEDKERHEAVVRRTMERSQKPKQKHNRWSWGGPLHGSPSIHSTDPDRRSVSTMNLSKHVDPVISKRLSSSSATLLNSPDRARRLQLSPWESSVVNRLLTPTHSFLARSKSTAALSGDTASCSPINIMPYKAAHSRNPMERPKFFVTPPEGSARRRTVHGTAGYKRERERENIPFHLTSGARRALSPSHPKARSPASSRLWLPSKSFPHLPGTPRPAPSAPPGSVKAAPAQARPPSPGNIRPIKREVRVEPERKDPDKEPQKVANESSLKARAPLVKVEEATVEDTTPVEPEAAPAAPAAAPGPGPAPGPAPGPAPAPSSTVTASASPKTSAGTTDPEEATRLLAEKRRLAREQREKEEREKREKEELERQKREELAQKVAEERTRREEEARQLEAEQAREKEEQLRRQEEERARREQEEVERVQKQKEEEARVREAAERVRQEREKHFQREEQERLERKKRLEEIMKRTRRTEASDKKIVDQRNGDIAKGALTGGTVSALPCVTNSPGQGEPVTSPHVATSHQSKVTLESTPNLEKQPNENGVSVSNENFEEIINLPIGSKQSRLDVTNSESPDIPLNPILAFEDEGSLGPLPQVDGVQTQQTAEVI", "length": 762, "header": "tr|A0A287B6B6-1|A0A287B6B6_PIG Isoform 1 of Microtubule associated protein 7 OS=Sus scrofa OX=9823 GN=MAP7 PE=1 SV=3 CANONICAL=A0A287B6B6-1" }, "locus": { "chromosome": "1", "start_pos": 27781277, "end_pos": 27633195, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065529.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065529.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051634.3", "url": "https://www.ensembl.org/id/ENSSSCP00000051634.3" } ] } }, { "isoform_ac": "A0A287B9U0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9U0/entry", "sequence": { "sequence": "MEDTKLVSPDGNKVQDKKIAPSNRSSSAISGQNSNHSGSKPDPPPVLRVDDRQRLARERREEREKQLAAREIIWLEREERARQHYEKHLEERKKKLEEQRLKEERRRAAVEEKRRQRLEEDKERHEAVVRRTMERSQKPKQKHNRWSWGGPLHGSPSIHSTDPDRRSVSTMNLSKHVDPVISKRLSSSSATLLNSPDRARRLQLSPWESSVVNRLLTPTHSFLARSKSTAALSGDTASCSPINIMPYKAAHSRNPMERPKFFVTPPEGSARRRTVHGTAGYKRERERENIPFHLTSGARRALSPSHPKARSPASSRLWLPSKSFPHLPGTPRPAPSAPPGSVKAAPAQARPPSPGNIRPIKREVRVEPERKDPDKEPQKVANESSLKARAPLVKVEEATVEDTTPVEPEAAPAAPAAAPGPGPAPGPAPGPAPAPSSTVTASASPKTSAGTTDPEEATRLLAEKRRLAREQREKEEREKREKEELERQKREELAQKVAEERTRREEEARQLEAEQAREKEEQLRRQEEERARREQEEVERVQKQKEEEARVREAAERVRQEREKHFQREEQERLERKKRLEEIMKRTRRTEASDKKIVDQRNGDIAKGALTGGTAVSALPCVTNSPGQGEPVTSPHVATSHQSKVTLESTPNLEKQPNENGVSVSNENFEEIINLPIGSKQSRLDVTNSESPDIPLNPILAFEDEGSLGPLPQVDGVQTQQTAEVI", "length": 726, "header": "tr|A0A287B9U0-1|A0A287B9U0_PIG Computationally mapped isoform of Microtubule associated protein 7 OS=Sus scrofa OX=9823 GN=MAP7 PE=1 SV=2 CANONICAL=A0A287B6B6-1" }, "locus": { "chromosome": "1", "start_pos": 27781277, "end_pos": 27679591, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062995.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062995.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053263.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053263.2" } ] } }, { "isoform_ac": "A0A287BN26-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BN26/entry", "sequence": { "sequence": "MADLGAGGDSHRGGDGAAHSETAPDGNKVQDKKIAPSNRSSSAISGQNSNHSGSKPDPPPVLRVDDRQRLARERREEREKQLAAREIIWLEREERARQHYEKHLEERKKKLEEQRLKEERRRAAVEEKRRQRLEEDKERHEAVVRRTMERSQKPKQKHNRWSWGGPLHGSPSIHSTARRLQLSPWESSVVNRLLTPTHSFLARSKSTAALSGDTASCSPINIMPYKAAHSRNPMERPKFFVTPPEGSARRRTVHGTAGYKRERERENIPFHLTSGARRALSPSHPKARSPASSRLWLPSKSFPHLPGTPRPAPSAPPGSVKAAPAQARPPSPGNIRPIKREVRVEPERKDPDKEPQKVANESSLKARAPLVKVEEATVEDTTPVEPEAAPAAPAAAPGPGPAPGPAPGPAPAPSSTVTASASPKTSAGTTDPEEATRLLAEKRRLAREQREKEEREKREKEELERQKREELAQKVAEERTRREEEARQLEAEQAREKEEQLRRQEEERARREQEEVERVQKQKEEEARVREAAERVRQEREKHFQREEQERLERKKRLEEIMKRTRRTEASDKKIVDQRNGDIAKGALTGGTAVSALPCVTNSPGQGEPVTSPHVATSHQSKVTLESTPNLEKQPNENGVSVSNENFEEIINLPIGSKQSRLDVTNSESPDIPLNPILAFEDEGSLGPLPQVDGVQTQQTAEVI", "length": 704, "header": "tr|A0A287BN26-1|A0A287BN26_PIG Computationally mapped isoform of Microtubule associated protein 7 OS=Sus scrofa OX=9823 GN=MAP7 PE=1 SV=2 CANONICAL=A0A287B6B6-1" }, "locus": { "chromosome": "1", "start_pos": 27781277, "end_pos": 27606095, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038446.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038446.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057911.2", "url": "https://www.ensembl.org/id/ENSSSCP00000057911.2" } ] } }, { "isoform_ac": "A0A5G2R4E1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4E1/entry", "sequence": { "sequence": "MADLGAGGDSHRGGDGAAHSETDPPPVLRVDDRQRLARERREEREKQLAAREIIWLEREERARQHYEKHLEERKKKLEEQRLKEERRRAAVEEKRRQRLEEDKERHEAVVRRTMERSQKPKQKHNRWSWGGPLHGSPSIHSTDPDRRSVSTMNLSKHVDPVISKRLSSSSATLLNSPDRARRLQLSPWESSVVNRLLTPTHSFLARSKSTAALSGDTASCSPINIMPYKAAHSRNPMERPKFFVTPPEGSARRRTVHGTAGYKRERERENIPFHLTSGARRALSPSHPKARSPASSRLWLPSKSFPHLPGTPRPAPSAPPGSVKAAPAQARPPSPGNIRPIKREVRVEPERKDPDKEPQKVANESSLKARAPLVKVEEATVEDTTPVEPEAAPAAPAAAPGPGPAPGPAPGPAPAPSSTVTASASPKTSAGTTDPEEATRLLAEKRRLAREQREKEEREKREKEELERQKREELAQKVAEERTRREEEARQLEAEQAREKEEQLRRQEEERARREQEEVERVQKQKEEEARVREAAERVRQEREKHFQREEQERLERKKRLEEIMKRTRRTEASDKKIVDQRNGDIAKGALTGGTVSALPCVTNSPGQGEPVTSPHVATSHQSKVTLESTPNLEKQPNENGVSVSNENFEEIINLPIGSKQSRLDVTNSESPDIPLNPILAFEDEGSLGPLPQVDGVQTQQTAEVI", "length": 706, "header": "tr|A0A5G2R4E1-1|A0A287B6B6_PIG Computationally mapped isoform of Microtubule associated protein 7 OS=Sus scrofa OX=9823 GN=MAP7 PE=1 SV=1 CANONICAL=A0A287B6B6-1" }, "locus": { "chromosome": "1", "start_pos": 27781277, "end_pos": 27606095, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091238.1", "url": "https://www.ensembl.org/id/ENSSSCT00000091238.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072078.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072078.1" } ] } }, { "isoform_ac": "A0A5G2RB61-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RB61/entry", "sequence": { "sequence": "MADLGAGGDSHRGGDGAAHSETAPDGNKVQDKKIAPSNRSSSAISGQNSNHSGSKPDPPPVLRVDDRQRLARERREEREKQLDPDRRSVSTMNLSKHVDPVISKRLSSSSATLLNSPDRARRLQLSPWESSVVNRLLTPTHSFLARSKSTAALSGDTASCSPINIMPYKAAHSRNPMERPKFFVTPPEGSARRRTVHGTAGYKRERERENIPFHLTSGARRALSPSHPKARSPASSRLWLPSKSFPHLPGTPRPAPSAPPGSVKAAPAQARPPSPGNIRPIKREVRVEPERKDPDKEPQKVANESSLKARAPLVKVEEATVEDTTPVEPEAAPAAPAAAPGPGPAPGPAPGPAPAPSSTVTASASPKTSAGTTDPEEATRLLAEKRRLAREQREKEEREKREKEELERQKREELAQKVAEERTRREEEARQLEAEQAREKEEQLRRQEEERARREQEEVERVQKQKEEEARVREAAERVRQEREKHFQREEQERLERKKRLEEIMKRTRRTEASDKKIVDQRNGDIAKGALTGGTAVSALPCVTNSPGQGEPVTSPHVATSHQSKVTLESTPNLEKQPNENGVSVSNENFEEIINLPIGSKQSRLDVTNSESPDIPLNPILAFEDEGSLGPLPQVDGVQTQQTAEVI", "length": 647, "header": "tr|A0A5G2RB61-1|A0A287B6B6_PIG Computationally mapped isoform of Microtubule associated protein 7 OS=Sus scrofa OX=9823 GN=MAP7 PE=1 SV=1 CANONICAL=A0A287B6B6-1" }, "locus": { "chromosome": "1", "start_pos": 27781277, "end_pos": 27606095, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091022.1", "url": "https://www.ensembl.org/id/ENSSSCT00000091022.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071390.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071390.1" } ] } }, { "isoform_ac": "A0A8W4FK61-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FK61/entry", "sequence": { "sequence": "MPGSATALRQERLKKTNARPVPLGLFTINEEDEQQKNGNSRRPKAPDGNKVQDKKIAPSNRSSSAISGQNSNHSGSKPDPPPVLRVDDRQRLARERREEREKQLAAREIIWLEREERARQHYEKHLEERKKKLEEQRLKEERRRAAVEEKRRQRLEEDKERHEAVVRRTMERSQKPKQKHNRWSWGGPLHGSPSIHSTDPDRRSVSTMNLSKHVDPVISKRLSSSSATLLNSPDRARRLQLSPWESSVVNRLLTPTHSFLARSKSTAALSGDTVIPICPRSASCSPINIMPYKAAHSRNPMERPKFFVTPPEGSARRRTVHGTAGYKRERERENIPFHLTSGARRALSPSHPKARSPASSRLWLPSKSFPHLPGTPRPAPSAPPGSVKAAPAQARPPSPGNIRPIKREVRVEPERKDPDKEPQKVANESSLKARAPLVKVEEATVEDTTPVEPEAAPAAPAAAPGPGPAPGPAPGPAPAPSSTVTASASPKTSAGTTDPEEATRLLAEKRRLAREQREKEEREKREKEELESPHVLRLPTSETGGNRQSLPVCKNQVPTSVQKEEEARVREAAERVRQEREKHFQREEQERLERKKRLEEIMKRTRRTEASDKKIVDQRNGDIAKGALTGGTVSALPCVTNSPGQGEPVTSPHVATSHQSKVTLESTPNLEKQPNENGVSVSNENFEEIINLPIGSKQSRLDVTNSESPDIPLNPILAFEDEGSLGPLPQVDGVQTQQTAGKLASNSLQ", "length": 749, "header": "tr|A0A8W4FK61-1|A0A287B6B6_PIG Computationally mapped isoform of Microtubule associated protein 7 OS=Sus scrofa OX=9823 GN=MAP7 PE=1 SV=1 CANONICAL=A0A287B6B6-1" }, "locus": { "chromosome": "1", "start_pos": 27779656, "end_pos": 27633195, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000096751.1", "url": "https://www.ensembl.org/id/ENSSSCT00000096751.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078695.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078695.1" } ] } }, { "isoform_ac": "A0A8W4FKM5-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FKM5/entry", "sequence": { "sequence": "MDPEDTTYVFSLCLICIAPDGNKVQDKKIAPSNRSSSAISGQNSNHSGSKPDPPPVLRVDDRQRLARERREEREKQLAAREIIWLEREERARQHYEKHLEERKKKLEEQRLKEERRRAAVEEKRRQRLEEDKERHEAVVRRTMERSQKPKQKHNRWSWGGPLHGSPSIHSTDPDRRSVSTMNLSKHVDPVISKRLSSSSATLLNSPDRARRLQLSPWESSVVNRLLTPTHSFLARSKSTAALSGDTASCSPINIMPYKAAHSRNPMERPKFFVTPPEGSARRRTVHGTAGYKRERERENIPFHLTSGARRALSPSHPKARSPASSRLWLPSKSFPHLPGTPRPAPSAPPGSVKAAPAQARPPSPGNIRPIKREVRVEPERKDPDKEPQKVANESSLKARAPLVKVEEATVEDTTPVEPEAAPAAPAAAPGPGPAPGPAPGPAPAPSSTVTASASPKTSAGTTDPEEATRLLAEKRRLAREQREKEEREKREKEELESPHVLRLPTSETGGNRQSLPVCKNQVPTSVQKEEEARVREAAERVRQEREKHFQREEQERLERKKRLEEIMKRTRRTEASDKKIVDQRNGDIAKGALTGGTAVSALPCVTNSPGQGEPVTSPHVATSHQSKVTLESTPNLEKQPNENGVSVSNENFEEIINLPIGSKQSRLDVTNSESPDIPLNPILAFEDEGSLGPLPQVDGVQTQQTAGKLASNSLQ", "length": 715, "header": "tr|A0A8W4FKM5-1|A0A287B6B6_PIG Computationally mapped isoform of Microtubule associated protein 7 OS=Sus scrofa OX=9823 GN=MAP7 PE=1 SV=1 CANONICAL=A0A287B6B6-1" }, "locus": { "chromosome": "1", "start_pos": 27779656, "end_pos": 27717286, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000097654.1", "url": "https://www.ensembl.org/id/ENSSSCT00000097654.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079884.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079884.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R4E1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4E1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0AB32TG86-1", "protein_name": "Ensconsin isoform X1", "gene_name": "map7b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPAPLRTRRGACRSAVPSLSTIAEEEEGQRSRKRRRRGGGGSDYLLRADEKSSWSRPDSSASGQYTYTIPSPTEIHTVTKPEPLMLKNDERQRLARERREELDKQNAVRGSKWQEREERARQFHERQLEERKKRLEEQRMKEDKRRAAVEEKRRQKLEEEKVRYEAVIRRTMERSQRARPKSNRWSWGGTLSVSTSHNSGFDDCALFPLDLAGLEHYHGVFSLAHQQQMRSKYADRRSVSTMNLSKHTDPVISKRLSSSSATLLNSPDRALRKQTSFSSSCLLKKTLSKSQISREKTPQDKTAGMRRMPLTPWENTVISRLQTPTHSYLARSRSAMSLSGEAVTPVCPRSASCHPMSSMSFKSIQSRSAERPMKAGLNLERPIRAGFIPPDGSNRRKITQNIMIDRKDKDNVRKSWSNLSYPTPSLSLFTPKRAPSPVGHRSRVTNPSPNRSSTAKPFQKTPNPKKSRSPPPPASIPLSHSNPSLSPGNLRPSRPTSESLRVTAEREAAKKEDVEPPKTEPEAPLTTTEPSSEASGSSPGGRPSAGTTDPEEASRLLAEKRRQAREQREREEEEKRQQEEAERRSREEMARRKAEERAKREEEAQRQAEEKRRKEEEEMRLEEERAQREREEAERLQKQKEEEEARQKEEAERLRLEREKHFQKEEAERMERKKRLEEIMKRTRRSDQKTTPQRNGDVSQQSGQDPGSVSGGPSVSVSDPLASETLETVQSDSNGHTGPSYITPVLPTSGHSMSALLRENGTINETFEQVIEVPLANKLSRQDGDGEELDREEEEERKRPFLAFRENGSTHNVSELNEEPTL", "length": 822 }, "evidence": [ { "id": "A0A287B6B6", "url": "https://omabrowser.org/oma/group/A0A287B6B6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0ABK0L9L9-1", "protein_name": "Microtubule-associated protein 7", "gene_name": "Map7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPGSATAIRQERLKTTHSRTIPLVLFTINEEDELQKNGNSRRPKASDGYKIQGKRPAPSRPTSTLSGQTSNHSGNKPDPPPVLRVDDRQRLARERREEREKQLAARETVWLEREERARQHYERHLEARKKKLEDQRLKEERRRAAVEEKRRQRLEEDKERHEAVVRRTMERSQKPKQKYNRWSWGSPLHGSSSIHSGDPDRRSVSTMNLSKHVDPVISKRLSSSSATLLNSPDRARRLQLSPWESSVVSRLLTPTHSFLARSKSTAALSGDTASCSPITTPFKTAHSRNPVDRPKLFITPPEGSARRRTIHGISSYKREREHIPFHVSPGVRRTLSPSNLKARSPAPARLWPPSKSMPHLPGTPRPASSLTPGPVRAAASSSSPGNIRPVKREVKVEPEKKDPEKKVTNDPTIKGRVPLVKVEEGTVEEGTPVKPPDPAVPAPTPATDPAPAPPSPSSVSVGVIPKTSAGTTDPEEATRLLAEKRRLAREQREKEERERKEKEELERQKIEELARRVAEERSRREEEARRLEAEQARKREELALRLAEEERERWEREEVERAQKQKEEEARAREEAEKARQEREKHFQKEEQERLERKKRLEEIMRRTRRTETADKKTTGQSNGDMVKGVLAGETEVSALPGVNSPGHVESAGSTHGVALQQSKVTIESSPDLEKQPNENGMSTQNENFEEIINLPVGSKASRLDVSNENPEIPLKPILAFNDEGTLGPLPQVDGVQTQQTTEVI", "length": 745 }, "evidence": [ { "id": "A0A287B6B6", "url": "https://omabrowser.org/oma/group/A0A287B6B6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "O88735-1", "protein_name": "Ensconsin", "gene_name": "Map7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAEQGAGGDGHRGGDGATHSDPASDGYKVQEKRTAPSRPTSTVSGQTSNHSGNKPDPPPVLRVDDRQRLARERREEREKQLAARETVWLEREERARQHYERHLEARKKKLEDQRLKEERRRAAVEEKRRQRLEEDKERHEAVVRRTMERSQKPRQKSNRWSWGSPLHGSSSIHSGDPDRRSVSTMNLSKHVDPVISKRLSSSSATLLNSPDRARRLQLSPWESSVVSRLLTPTHSFLARSKSTAALSGDTASCSPIIMPFKAAHSRNPVDRPKLFVTPPEGSARRRTIHGLASHKREREREHVPFHVSPGARRTLSPSNLKARSPAPARLWLPSKSMPHLPGTPRPASSLPPGSVRAASAQAPSSSPGNIRPFKREVKVEPEKKDPLPAVKSRVPLVKVEEVTVEEGTPVKPPEPAAPASAPIATPAPAPATDPAPVPAPSSTVTVGVVPKTSAGTTDPEEATRLLAEKRRLAREQREKEERERKEKEELERQKIEELARRVAEERSRREEEARRLEEEQAREKEELALRLAEEERERWEREEVERVQKQKEEEARAREEAERARQEREKHFQKEEQERLERKKRLEEIMRRTRRTETADKKTTEQRNGDIAKGVLTGEPEVPALPCMASSGNGESAESPHGVALQQSEVTTESSPDLEKQPNENGMSIQNENFEEVINLPVGSKASRLDVTNENPEIPLKPILAFNDEGTLGPLPQVDGVQTQQTAEVI", "length": 730 }, "evidence": [ { "id": "A0A287B6B6", "url": "https://omabrowser.org/oma/group/A0A287B6B6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q14244-1", "protein_name": "Ensconsin", "gene_name": "MAP7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAELGAGGDGHRGGDGAVRSETAPDSYKVQDKKNASSRPASAISGQNNNHSGNKPDPPPVLRVDDRQRLARERREEREKQLAAREIVWLEREERARQHYEKHLEERKKRLEEQRQKEERRRAAVEEKRRQRLEEDKERHEAVVRRTMERSQKPKQKHNRWSWGGSLHGSPSIHSADPDRRSVSTMNLSKYVDPVISKRLSSSSATLLNSPDRARRLQLSPWESSVVNRLLTPTHSFLARSKSTAALSGEAASCSPIIMPYKAAHSRNSMDRPKLFVTPPEGSSRRRIIHGTASYKKERERENVLFLTSGTRRAVSPSNPKARQPARSRLWLPSKSLPHLPGTPRPTSSLPPGSVKAAPAQVRPPSPGNIRPVKREVKVEPEKKDPEKEPQKVANEPSLKGRAPLVKVEEATVEERTPAEPEVGPAAPAMAPAPASAPAPASAPAPAPVPTPAMVSAPSSTVNASASVKTSAGTTDPEEATRLLAEKRRLAREQREKEERERREQEELERQKREELAQRVAEERTTRREEESRRLEAEQAREKEEQLQRQAEERALREREEAERAQRQKEEEARVREEAERVRQEREKHFQREEQERLERKKRLEEIMKRTRRTEATDKKTSDQRNGDIAKGALTGGTEVSALPCTTNAPGNGKPVGSPHVVTSHQSKVTVESTPDLEKQPNENGVSVQNENFEEIINLPIGSKPSRLDVTNSESPEIPLNPILAFDDEGTLGPLPQVDGVQTQQTAEVI", "length": 749 }, "evidence": [ { "id": "A0A287B6B6", "url": "https://omabrowser.org/oma/group/A0A287B6B6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "microtubule cytoskeleton", "id": "GO:0015630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015630", "evidence": [ { "database": "UniProtKB", "id": "A0A287B6B6", "url": "https://www.uniprot.org/uniprotkb/A0A287B6B6" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A287B6B6", "url": "https://www.uniprot.org/uniprotkb/A0A287B6B6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "microtubule cytoskeleton organization", "id": "GO:0000226", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000226", "evidence": [ { "database": "UniProtKB", "id": "A0A287B6B6", "url": "https://www.uniprot.org/uniprotkb/A0A287B6B6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 209, "end_pos": 211, "annotation": "n_glycosylation_sequon" }, { "start_pos": 419, "end_pos": 421, "annotation": "n_glycosylation_sequon" }, { "start_pos": 60, "end_pos": 62, "annotation": "n_glycosylation_sequon" }, { "start_pos": 72, "end_pos": 74, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287B6B6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 762, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287B6B6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287B6B6" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 209, "end_pos": 211 }, { "start_pos": 419, "end_pos": 421 }, { "start_pos": 60, "end_pos": 62 }, { "start_pos": 72, "end_pos": 74 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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{ "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B6G0-1", "uniprot_ac": "A0A287B6G0", "uniprot_id": "A0A287B6G0_PIG", "mass": { "chemical_mass": 143061.0, "monoisotopic_mass": 143061.0 }, "refseq": { "ac": "XP_020920965", "name": "spermatogenesis-associated protein 31D1-like", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920965" }, "gene_names": [ { "name": "LOC102164346", "type": "recommended", "evidence": [ { "id": "A0A287B6G0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B6G0" } ] }, { "name": "LOC102164346", "type": "synonym", "evidence": [ { "id": "XP_020920965", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920965" } ] } ], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "A0A287B6G0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B6G0/entry#names_and_taxonomy" } ] }, { "name": "spermatogenesis-associated protein 31D1-like", "type": "synonym", "evidence": [ { "id": "XP_020920965", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920965" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B6G0", "url": "https://www.uniprot.org/uniprotkb/A0A287B6G0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LOC102164346", "url": "https://www.uniprot.org/uniprotkb/A0A287B6G0", "locus": {} } ], "crossref": [ { "id": "A0A287B6G0", "url": "https://alphafold.ebi.ac.uk/entry/A0A287B6G0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000037497", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000037497", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "102164346", "url": "https://www.ncbi.nlm.nih.gov/gene/102164346", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR027970", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027970", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039509", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039509", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:102164346", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102164346", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QKWSEYQ", "url": "https://omabrowser.org/oma/group/QKWSEYQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287B6G0", "url": "https://www.orthodb.org/?gene=A0A287B6G0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21859", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21859", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21859:SF51", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21859:SF51", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF14650", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14650", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF15371", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15371", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020920965", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920965", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AAR6", "url": "https://www.uniprot.org/uniprotkb/A0A287AAR6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AAR6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AAR6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6G0", "url": "https://www.uniprot.org/uniprotkb/A0A287B6G0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6G0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6G0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSPSLSFFSFCSQHQGRAKRRRKGRILKGWRACQSEVEDARKVLSLLQSPLGQHDDTTRFRQLLCPDTSCEVCNNASAEVSRLLFPEALEDATSSVSPLASTAPVTDSSFIQSKSISILSKPVLEKSSSDSPDGFSTCVPTIRGTEHSGLSSSDFSWWKAHVNKMFLPTLPHSDIQQEHVSFHLPETCLCRDSVTKDMEASSHSFLGLNIQALMKRQIKKRMAFQNLEKKEKEEGPFSKQMWSEYQRTSSRNSLKSLDIQDNVDPQTDSNVESKSEQLHICQQLLYVKTLGGNLQQKYSQLFWGLPSLHSESLVATLLVSSSSSPLESHFVLFNGVCNGSSVKMHDQESPPHLHSHPLPLPHVHPQPLPQTKPKSQPLPFTQVQPQVNLQSRLPILPSSPPSQIRDCGVSFHRLQNESDFHIATENQHLEWHVLQKQQESLWGLVPMLHKSQEATCPRALNLPLVNQSSHACVPVSIIPDHFHITSEPQEKLELHVPRRLIPRWCLQACRNLESLALMEPQYKLIEVSQQRGRHVHLQLSELNGQHSKDLGMTELGLPGSFHERVPTKFQLRDDMRKNLGYILEKSPEDRPQGASECYLVQGLRPALGTQSNCVCNSRNHSSYELLNVSRKDIDRNQIKTILRLHVSTKSWQISAGRIPVGVCRSWLAEDNTLPPSRSSQTNMEDANSENTKVARAYCQTSTLELSFLNPNTRKVLEAHILRFRVTQRWGLPLKVLESIKFYMLREAKTWPLPQFDFPSSTTHVSGADSKTEISKPLEGSSTTSQGKKMRTTNSVPMLAHPLSVISSVGNEGQGAPQPSHSDFHQKLTEDVRTTDRGRQAFQSITHRNKDKVGQSETLVDNRCSPEVPRRQSGDGHEPRNKNVYSSDRVEMIQVQKTVEKNLEHSFMSNMSREIFKANELCALKSQSCDISTTRKVENSQRTNVKMNKVGNTLTTQCPSPKTSVRQDSKLSDLEKQLITELKFKLESQKHSQAQCCPTDVPLTSHSLPSKLSLTHAQGISTGATAASQVPRVRLENSGVSMEQWQDPSKRALWMCQDNNFPSTAKRMSPLGSKAGEYRSGDSEVGTSKTRKKSHPIEDRELKDTFPSWSQDEQLPPESYFRKKMRQFFQWINSKRKIKAQGSPQQKAKFKSTFVQHQASVESASGFVSYGHPEAQELMMAIGKILEEKLACMLESEASEFRQHKKELQTQRESDKGHASSYRAVLDPQQKGWASTKSSNQEAVSADQSCLTSVRQNRDMITQPQKVAFEN", "length": 1270, "header": "tr|A0A287B6G0-1|A0A287B6G0_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN=LOC102164346 PE=3 SV=3 CANONICAL=A0A287B6G0-1" }, "isoforms": [ { "isoform_ac": "A0A287AAR6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AAR6/entry", "sequence": { "sequence": "MFLPTLPHSDIQQEHVSFHLPETCLCRDSVTKDMEASSHSFLGLNIQALMKRQIKKRMAFQNLEKKEKEEGPFSKQMWSEYQRTSSRNSLKSLDIQDNVDPQTDSNVESKSEQLHICQQLLYVKTLGGNLQQKYSQLFWGLPSLHSESLVATLLVSSSSSPLESHFVLFNGVCNGSSVKMHDQESPPHLHSHPLPLPHVHPQPLPQTKPKSQPLPFTQVQPQVNLQSRLPILPSSPPSQIRDCGVSFHRLQNESDFHIATENQHLEWHVLQKQQESLWGLVPMLHKSQEATCPRALNLPLVNQSSHACVPVSIIPDHFHITSEPQEKLELHVPRRLIPRWCLQACRNLESLALMEPQYKLIEVSQQRGRHVHLQLSELNGQHSKDLGMTELGLPGSFHERVPTKFQLRDDMRKNLGYILEKSPEDRPQGASECYLVQGLRPALGTQSNCVCNSRNHSSYELLNVSRKDIDRNQIKTILRLHVSTKSWQISAGRIPVGVCRSWLAEDNTLPPSRSSQTNMEDANSENTKVARAYCQTSTLELSFLNPNTRKVLEAHILRFRVTQRWGLPLKVLESIKFYMLREAKTWPLPQFDFPSSTTHVSGADSKTEISKPLEGSSTTSQGKKMRTTNSVPMLAHPLSVISSVGNEGQGAPQPSHSDFHQKLTEDVRTTDRGRQAFQSITHRNKDKVGQSETLVDNRCSPEVPRRQSGDGHEPRNKNVYSSDRVEMIQVQKTVEKNLEHSFMSNMSREIFKANELCALKSQSCDISTTRKVENSQRTNVKMNKVGNTLTTQCPSPKTSVRQDSKLSDLEKQLITELKFKLESQKHSQAQCCPTDVPLTSHSLPSKLSLTHAQGISTGATAASQVPRVRLENSGVSMEQWQDPSKRALWMCQDNNFPSTAKRMSPLGSKAGEYRSGDSEVGTSKTRKKSHPIEDRELKDTFPSWSQDEQLPPESYFRKKMRQFFQWINSKRKIKAQGSPQQKAKFKSTFVQHQASVESASGFVSYGHPEAQELMMAIGKILEEKLACMLESEASEFRQHKKELQTQRESDKGHASSYRAVLDPQQKGWASTKSSNQEAVSADQSCLTSVRQNRDMITQPQKVAFEN", "length": 1106, "header": "tr|A0A287AAR6-1|A0A287B6G0_PIG Computationally mapped isoform of Uncharacterized protein OS=Sus scrofa OX=9823 GN=LOC102164346 PE=3 SV=1 CANONICAL=A0A287B6G0-1" }, "locus": { "chromosome": "1", "start_pos": 234580746, "end_pos": 234577429, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052100.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052100.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000040884.1", "url": "https://www.ensembl.org/id/ENSSSCP00000040884.1" } ] } }, { "isoform_ac": "A0A287B6G0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6G0/entry", "sequence": { "sequence": "MSPSLSFFSFCSQHQGRAKRRRKGRILKGWRACQSEVEDARKVLSLLQSPLGQHDDTTRFRQLLCPDTSCEVCNNASAEVSRLLFPEALEDATSSVSPLASTAPVTDSSFIQSKSISILSKPVLEKSSSDSPDGFSTCVPTIRGTEHSGLSSSDFSWWKAHVNKMFLPTLPHSDIQQEHVSFHLPETCLCRDSVTKDMEASSHSFLGLNIQALMKRQIKKRMAFQNLEKKEKEEGPFSKQMWSEYQRTSSRNSLKSLDIQDNVDPQTDSNVESKSEQLHICQQLLYVKTLGGNLQQKYSQLFWGLPSLHSESLVATLLVSSSSSPLESHFVLFNGVCNGSSVKMHDQESPPHLHSHPLPLPHVHPQPLPQTKPKSQPLPFTQVQPQVNLQSRLPILPSSPPSQIRDCGVSFHRLQNESDFHIATENQHLEWHVLQKQQESLWGLVPMLHKSQEATCPRALNLPLVNQSSHACVPVSIIPDHFHITSEPQEKLELHVPRRLIPRWCLQACRNLESLALMEPQYKLIEVSQQRGRHVHLQLSELNGQHSKDLGMTELGLPGSFHERVPTKFQLRDDMRKNLGYILEKSPEDRPQGASECYLVQGLRPALGTQSNCVCNSRNHSSYELLNVSRKDIDRNQIKTILRLHVSTKSWQISAGRIPVGVCRSWLAEDNTLPPSRSSQTNMEDANSENTKVARAYCQTSTLELSFLNPNTRKVLEAHILRFRVTQRWGLPLKVLESIKFYMLREAKTWPLPQFDFPSSTTHVSGADSKTEISKPLEGSSTTSQGKKMRTTNSVPMLAHPLSVISSVGNEGQGAPQPSHSDFHQKLTEDVRTTDRGRQAFQSITHRNKDKVGQSETLVDNRCSPEVPRRQSGDGHEPRNKNVYSSDRVEMIQVQKTVEKNLEHSFMSNMSREIFKANELCALKSQSCDISTTRKVENSQRTNVKMNKVGNTLTTQCPSPKTSVRQDSKLSDLEKQLITELKFKLESQKHSQAQCCPTDVPLTSHSLPSKLSLTHAQGISTGATAASQVPRVRLENSGVSMEQWQDPSKRALWMCQDNNFPSTAKRMSPLGSKAGEYRSGDSEVGTSKTRKKSHPIEDRELKDTFPSWSQDEQLPPESYFRKKMRQFFQWINSKRKIKAQGSPQQKAKFKSTFVQHQASVESASGFVSYGHPEAQELMMAIGKILEEKLACMLESEASEFRQHKKELQTQRESDKGHASSYRAVLDPQQKGWASTKSSNQEAVSADQSCLTSVRQNRDMITQPQKVAFEN", "length": 1270, "header": "tr|A0A287B6G0-1|A0A287B6G0_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN=LOC102164346 PE=3 SV=3 CANONICAL=A0A287B6G0-1" }, "locus": { "chromosome": "1", "start_pos": 234580746, "end_pos": 234576074, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050314.3", "url": "https://www.ensembl.org/id/ENSSSCT00000050314.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052107.3", "url": "https://www.ensembl.org/id/ENSSSCP00000052107.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287AAR6", "url": "https://www.uniprot.org/uniprotkb/A0A287AAR6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:102164346", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102164346", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "J3QMS2-1", "protein_name": "Spermatogenesis associated 31 subfamily D, member 1E", "gene_name": "Spata31d1e", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKKKMSPQTLEEVKKRDDISPDPKRSEGKLTALWNSQGSTVTNLDTQVPKINLKLKGKRKYFGAYDQVLYVKIPEGDLGQKHSQLFWGLPSLHSESIMATLLVPASSYSPEPCLVLFNGVCKTASAPVLSHGLPALPQPLTLVHPQPLPKVAPQPQTLTEGMPQVHMQSPLSSMALPSLPCGSALQIPQTRTVSDVLNGKGHLQYHLVQNPQDSLWGLVPECQQYETALGLPVHSFPVGSQSSQTYVSVPGSGLFHFSSEHQNNLDPYGPNNLTSPSCFELCNRPGVPEVMNTQFNPTGVSSYCYKYATSQCCVHWGNICADPGNGELSHSESYCVKVPMKPQLRKDAAKNLGQILGKCPLDNTQMISGCCILNGLKTIPETEGESVCHSRTSLENEQLTISKKNLDQRHMRSILRLHMSRKCWQITMGRIPIVVCCSWLDEDASLWRSPLGKIHCDTAIPEIPFLDHKTQKMLEAHLIRFRVSQQWGLPIKVIESIKFYILREAKTWPLPQSDLPLSLNSIPGLDLKSNFPSPLRGSSDLLHGDKIETTDSAPTTDYSLTLLHVDSEGERSLRQSVSSPTSDVSETVEDDRPSNPDLSQNETDLQSRPRQEQPVKEDVTLSDSENESASSASHLVTAESRQSVEKNPKYTVTPNMLREMILKARELFVRSGSDSIIKSKSSTKKDEDESLSSPLVATGQSPSKMSVPEEPTAPDLFKELRSKLEDQPQSQSEAWEDESSFVSDSFSLPSSSNSVSSADVSVFWDTQGHMYSTGISVDPWQEPSVFKRFLKNVMPAQKRLSLPKSRKENGRSDPQELETPKAGKKSQPSKEKSSKREHPPDSYFRKKIGQFFQWLYSSKDSPRHRSEKDGALFMSCGPPEAHELMASLGKLLEDKLLYGQNSEFLEWSQTSMLAQPALKGQPSDLGAADGHHGEEASNCSCPQTAITPGPSHMLSLGQRHHPLPFEYPPSAPESLSSVQAPLA", "length": 983 }, "evidence": [ { "id": "A0A287B6G0", "url": "https://omabrowser.org/oma/group/A0A287B6G0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A287B6G0", "url": "https://www.uniprot.org/uniprotkb/A0A287B6G0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 338, "end_pos": 340, "annotation": "n_glycosylation_sequon" }, { "start_pos": 416, "end_pos": 418, "annotation": "n_glycosylation_sequon" }, { "start_pos": 466, "end_pos": 468, "annotation": "n_glycosylation_sequon" }, { "start_pos": 619, "end_pos": 621, "annotation": "n_glycosylation_sequon" }, { "start_pos": 627, "end_pos": 629, "annotation": "n_glycosylation_sequon" }, { "start_pos": 75, "end_pos": 77, "annotation": 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The DEPDC1A-ZNF224 complex may play a critical role in bladder carcinogenesis by repressing the transcription of the A20 gene, leading to transport of NF-KB protein into the nucleus, resulting in suppression of apoptosis of bladder cancer cells.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B5S3", "url": "https://www.uniprot.org/uniprotkb/A0A287B5S3#function" }, { "database": "UniProtKB", "id": "ARBA00055549", "url": "https://www.uniprot.org/uniprotkb/ARBA00055549#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B5S3", "url": "https://www.uniprot.org/uniprotkb/A0A287B5S3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DEPDC1", "url": "https://www.uniprot.org/uniprotkb/A0A287B5S3", "locus": { "chromosome": "6", "start_pos": 144185963, 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"database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008936", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008936", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036388", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036388", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036390", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036390", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "HRRHMRT", "url": "https://omabrowser.org/oma/group/HRRHMRT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR16206", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16206", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16206:SF12", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16206:SF12", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00610", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00610", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00620", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00620", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF27581", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF27581", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287ADZ6", "url": "https://www.uniprot.org/uniprotkb/A0A287ADZ6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ADZ6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ADZ6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B5S3", "url": "https://www.uniprot.org/uniprotkb/A0A287B5S3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B5S3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B5S3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MENRSVPPGPYRATKLWNEVTTSFRSGMPLRKHRQHFKKYGNCFTAGEAVDWLYDLLRNNSNFGPEVTRQQTIQLLRKFLKNHVIEDIKGKWGSENLDDNSQLFENTEKMNRDMISEDQENSVDNREINQKDVEEVWRHVVLIYLQTILGVSSLEEVINPKQVIPQYIMYNMTNTSKHGVVILQDKSDDLPHWVLSAMKCLANWPRSNDMNNPTYVGFERDVFRTIADYFLDLPEPLLTFEYYELFVNILVVCGYLTVSDRSSGLHKIQDDPQSSKILHLNSLNSFKSTECLLLSLLHKDKNKEESDTTERLQISDQGFQEKYAKKMQLVNLKYRRASANDIMGGSCHNLIGLSSMHGLCSNIKPRCYSLEGIIDLPGNSSKEVSSVFHQSVLNIEGQNNKHFLESKAKQESSLSLHSEQNIQKPLCVGFKRTSTLTIQDQEELCNGKCKSKQLCRSQSLLLRSSTRRNSYINMPVAEIIMKPNLGRGSTSVQTAMEGELRESSTTINKRLCKSTIELSENSLPPASSVLTGTQSLLQPHLERIAIDALQLCCLLLPPPNRRKLQLLMRMISRMSQNVDMPQLHDAMGTRSLMIHTFSRCVLRCAEEVDLDELLAARLVSFLMDHHQEILQVPSYLQTTVEEHLDYLRRGHIKNPSDVLIAPLPTYSYCKQISAQEFEEQKVSTSQAAIAELLENIIKNKSLPLKEKRKKLKQFQKEYPLIYQKRFPTSESEAALFDDKPTIKQPMLILRKPKFRSLRY", "length": 759, "header": "tr|A0A287B5S3-1|A0A287B5S3_PIG Isoform 1 of DEP domain-containing protein 1A OS=Sus scrofa OX=9823 GN=DEPDC1 PE=4 SV=2 CANONICAL=A0A287B5S3-1" }, "isoforms": [ { "isoform_ac": "A0A287ADZ6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ADZ6/entry", "sequence": { "sequence": "MENRSVPPGPYRATKLWNEVTTSFRSGMPLRKHRQHFKKYGNCFTAGEAVDWLYDLLRNNSNFGPEVTRQQTIQLLRKFLKNHVIEDIKGKWGSENLDDNSQLFRFPANSPLKTLPRRYPEVRKNSIENFSKDKDSIFKLRNLSRRTPKKHGLHFSQENTEKMNRDMISEDQENSVDNREINQKDVEEVWRHVVLIYLQTILGVSSLEEVINPKQVIPQYIMYNMTNTSKHGVVILQDKSDDLPHWVLSAMKCLANWPRSNDMNNPTYVGFERDVFRTIADYFLDLPEPLLTFEYYELFVNILGLLQPHLERIAIDALQLCCLLLPPPNRRKLQLLMRMISRMSQNVDMPQLHDAMGTRSLMIHTFSRCVLRCAEEVDLDELLAARLVSFLMDHHQEILQVPSYLQTTVEEHLDYLRRGHIKNPSDVLIAPLPTYSYCKQISAQEFEEQKVSTSQAAIAELLENIIKNKSLPLKEKRKKLKQFQKEYPLIYQKRFPTSESEAALFDDKPTIKQPMLILRKPKFRSLRY", "length": 528, "header": "tr|A0A287ADZ6-1|A0A287B5S3_PIG Computationally mapped isoform of DEP domain-containing protein 1A OS=Sus scrofa OX=9823 GN=DEPDC1 PE=4 SV=1 CANONICAL=A0A287B5S3-1" }, "locus": { "chromosome": "6", "start_pos": 144182555, "end_pos": 144157688, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046036.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046036.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000042112.1", "url": "https://www.ensembl.org/id/ENSSSCP00000042112.1" } ] } }, { "isoform_ac": "A0A287B5S3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B5S3/entry", "sequence": { "sequence": "MENRSVPPGPYRATKLWNEVTTSFRSGMPLRKHRQHFKKYGNCFTAGEAVDWLYDLLRNNSNFGPEVTRQQTIQLLRKFLKNHVIEDIKGKWGSENLDDNSQLFENTEKMNRDMISEDQENSVDNREINQKDVEEVWRHVVLIYLQTILGVSSLEEVINPKQVIPQYIMYNMTNTSKHGVVILQDKSDDLPHWVLSAMKCLANWPRSNDMNNPTYVGFERDVFRTIADYFLDLPEPLLTFEYYELFVNILVVCGYLTVSDRSSGLHKIQDDPQSSKILHLNSLNSFKSTECLLLSLLHKDKNKEESDTTERLQISDQGFQEKYAKKMQLVNLKYRRASANDIMGGSCHNLIGLSSMHGLCSNIKPRCYSLEGIIDLPGNSSKEVSSVFHQSVLNIEGQNNKHFLESKAKQESSLSLHSEQNIQKPLCVGFKRTSTLTIQDQEELCNGKCKSKQLCRSQSLLLRSSTRRNSYINMPVAEIIMKPNLGRGSTSVQTAMEGELRESSTTINKRLCKSTIELSENSLPPASSVLTGTQSLLQPHLERIAIDALQLCCLLLPPPNRRKLQLLMRMISRMSQNVDMPQLHDAMGTRSLMIHTFSRCVLRCAEEVDLDELLAARLVSFLMDHHQEILQVPSYLQTTVEEHLDYLRRGHIKNPSDVLIAPLPTYSYCKQISAQEFEEQKVSTSQAAIAELLENIIKNKSLPLKEKRKKLKQFQKEYPLIYQKRFPTSESEAALFDDKPTIKQPMLILRKPKFRSLRY", "length": 759, "header": "tr|A0A287B5S3-1|A0A287B5S3_PIG Isoform 1 of DEP domain-containing protein 1A OS=Sus scrofa OX=9823 GN=DEPDC1 PE=4 SV=2 CANONICAL=A0A287B5S3-1" }, "locus": { "chromosome": "6", "start_pos": 144182555, "end_pos": 144157688, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047257.3", "url": "https://www.ensembl.org/id/ENSSSCT00000047257.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051805.2", "url": "https://www.ensembl.org/id/ENSSSCP00000051805.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287ADZ6", "url": "https://www.uniprot.org/uniprotkb/A0A287ADZ6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q2TSI6-1", "protein_name": "DEP domain-containing protein 1A", "gene_name": "DEPDC1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MERRPAAPGPYRATELWNEITRYFRAGMPLRTHRQHFKKHGSCFTASEAADWLHEVLRSSSNFGPEVSRQQTVQLLRKFLKNHVIEDIKGRWGAENLEDNGALYRFPSTSPVKPLPAPCRQNENLQTFSKDRLLKLPHLSRRTLKKHQLLTPLDNVEKTKLDKTAENEEDALCRKEVSQEYVQETWRNIILIHLQTILGLPSLEEVLQPTQIVPEHVIYNMTHTSKHGVVILQNKSEDLPHWVLSAMKCLAYWPRNNDMSQPTYSGFERDVFRTVADYFVNLPEPLLTFEYYELFVNILVMCGFITIPNTCSGKHSVRDETRDPQSSKIPHLNSFKSTECLLLSLLRKEPKEIKEDYEASWKSSSEELADQTQRAKKLQQHKLASKQGSADNLIGGSCQNLSGFRNEQDLSLTFKTRCYSLERIGNTASRVHNKGELDSLRKTNVLSTRNEKQWLPCVSKTDSVLEFGFENTFQKQTDGSKRVSAPILQDRELFKENLKSKQICRSQGLLGSRSSRSCTSINVPIAEITVKPRSQLCGQGRPNTSVATSVGIRTEVSDITVSKRLCRSTIELSECSFTHSYVLTGTQNLLQPHLERIAVEALQICCLLLPPPNRRKMQLLMRMISRISENVDMPQLHDAMSTRSLMIQTFSRCVLCCAEEVDLDELLSTRLVSFLMDHQQEIFKVPTYLQVAVQDHLEYMKVAQCKYPGEEICAILPTYSYCEQITPQEFEEQKVSTSQAAVAELLENIIKDKNLSVKEKKKKLKQFQKEYPLIYQNRFPTTENEAMLFENKPTIKQPMLSLRKPKFRSLRH", "length": 812 }, "evidence": [ { "id": "A0A287B5S3", "url": "https://omabrowser.org/oma/group/A0A287B5S3/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8C2MR79-1", "protein_name": "DEP domain-containing protein 1A", "gene_name": "Depdc1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEDRGAPLGPYRATKLWNEVTTSFRVGMPLRKHRQHLKKYSNCFTAGEAVDWLYDLLRSNSNFGPEVTRQQTVQLLRKFLKNHVIEDIKGRWGSENLDDNNQLFRFPATSPLKTLPQRHTEIRKTSTEYFSKDKDSIFKLRNLSRKTPKKRGLLFSQENTENISHERIINEDQENSADNREISQEDVEEVWRYIIMIYLQTILGVPSIEELINPSQVIPQYIIYNMSNTSKHGVVILQDKSEDLPHWVLSAMKCLANWPKSNDNNNPTYVGFERDVFRTIADYFLDLPEPLLTFEYYELFVNILVVCGYITVSDRTSGIHKIHDDPRSSKIHHLSNLNSFKSTECLLLSLLHKDKSSEELDSTEILQRSDQGSQERCAKTMQIVNFRNRRASANDIMGGSCHNLIGLSNTHVLSSNTKPRCSSLEGIVDMPGNSSKKASSVFHQSFLSKVLNSKQSLVPMTKQKSLFNLHSEENIQQPYCADFKRNPTLTVQNQGELWKGNNNSKQLCRSQSLLLRNSTRQNRYINTPVAEIIMKPNVGQGSTSVRSELGESSPTINKRLCKSTVELSENSLLPAASKLTGTQSLLQPHLERVAINALQLCCLLLPPSNRRKLQLLMCMISRMSQNVDMPKLHEEIGTRSLMIRTFSRCVLCCAEEVDLDELLASRLVSFLMDHHQEILQVPTYLQTAVEKHLDYIRKGHVKNPGYGQVVPLPTYSYCQQISTQEFDEQKISTSQVAIEELLESIVRSKSLSLKERRRKLRQFQKEYPLIYKKRFPTTESEAALLDGKPTIKQPMLSLRNAKFHSLRY", "length": 808 }, "evidence": [ { "id": "A0A287B5S3", "url": "https://omabrowser.org/oma/group/A0A287B5S3/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "D3ZGJ9-1", "protein_name": "DEP domain-containing protein 1A", "gene_name": "Depdc1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MERQGAPLGPYRATKLWNEVTTSFRVGMPLRKHRQHLKKYSNCFTAVEAVDWLYDLLRSNSNFGPEVTRQQTIQLLRKFLKNHVIEDIKGRWGSENLDDNNQLFRFPATSPLKTFPQRHTEIKKTSTEYFSKDRDSIFKLRNLSRKTPKKRGLQFSQENTEKINHERITNEDQENVPENKEISQEDVEDVWRYVTMIYLQTILGVPSIEELINPNQVIPQYIMYNMANTSKHGVVILQNKSEDLPHWVLSAMKCLANWPRCNDTNSLTYVGFERDVFKTIADYFLDLPEPLLTFEYYELFVNILVVCGYITVSDKTSGIHKIQDDPRSSQIHDLSNLNSFKSTECLLLSLLSKDKSNEELDSTERLQRSDQGFQERCTKKMQLVNLRNRRASANDIMGGSCHNLIGLSNTNALSSNIKPRCSSLEGIIDMPVNSSEKKSSVFYLSVLNIEEHSSEQSLAPVPKQKSLLNLHSEEYAQQPHSVGFKRTSALTIEDQEDVCNGKYTSKQLCRSQSLLLRSSTRQNSSINKPVAEIIMKPNVGQGSTSVQSKLGGSITTINKRLCKSTIELSENSLPPAASVLTGTQSLLQPHLERVAINALQLCCLLLPPPNRRKLQLLMRMISRMSQNVDLPKLHEEIGTRSLMINTFSRCVLCCAEEVDLDELLASRLVSFLMDHHQEILQVPTYLQAAVEKHLDYIKKGHVKNHGDGLVVPLPTYSYCKQISAKEFDEQKISTSQAAIAELLENIVRSKSLPLKEKRRKLKQFQKEYPLIYQKRFPTTESEAALFDDKPTIKQPMLNLRNPKLHSLRY", "length": 809 }, "evidence": [ { "id": "A0A287B5S3", "url": "https://omabrowser.org/oma/group/A0A287B5S3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5TB30-5", "protein_name": "DEP domain-containing protein 1A", "gene_name": "DEPDC1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MESQGVPPGPYRATKLWNEVTTSFRAGMPLRKHRQHFKKYGNCFTAGEAVDWLYDLLRNNSNFGPEVTRQQTIQLLRKFLKNHVIEDIKGRWGSENVDDNNQLFRFPATSPLKTLPRRYPELRKNNIENFSKDKDSIFKLRNLSRRTPKRHGLHLSQENGEKIKHEIINEDQENAIDNRELSQEDVEEVWRYVILIYLQTILGVPSLEEVINPKQVIPQYIMYNMANTSKRGVVILQNKSDDLPHWVLSAMKCLANWPRSNDMNNPTYVGFERDVFRTIADYFLDLPEPLLTFEYYELFVNILVVCGYITVSDRSSGIHKIQDDPQSSKFLHLNNLNSFKSTECLLLSLLHREKNKEESDSTERLQISNPGFQERCAKKMQLVNLRNRRVSANDIMGGSCHNLIGLSNMHDLSSNSKPRCCSLEGIVDVPGNSSKEASSVFHQSFPNIEGQNNKLFLESKPKQEFLLNLHSEENIQKPFSAGFKRTSTLTVQDQEELCNGKCKSKQLCRSQSLLLRSSTRRNSYINTPVAEIIMKPNVGQGSTSVQTAMESELGESSATINKRLCKSTIELSENSLLPASSMLTGTQSLLQPHLERVAIDALQLCCLLLPPPNRRKLQLLMRMISRMSQNVDMPKLHDAMGTRSLMIHTFSRCVLCCAEEVDLDELLAGRLVSFLMDHHQEILQVPSYLQTAVEKHLDYLKKGHIENPGDGLFAPLPTYSYCKQISAQEFDEQKVSTSQAAIAELLENIIKNRSLPLKEKRKKLKQFQKEYPLIYQKRFPTTESEAALFGDKPTIKQPMLILRKPKFRSLR", "length": 811 }, "evidence": [ { "id": "A0A287B5S3", "url": "https://omabrowser.org/oma/group/A0A287B5S3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8CIG0-1", "protein_name": "DEP domain-containing protein 1A", "gene_name": "Depdc1a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQGAPLGPYRATKLWNEVTTSFRVGMPLRKHRQHLKKYSNCFTAVEAIDWLYDLLRSNSNFGPEVTRQQTIQLLRKFLKNHVIEDIKGRWGSESLDDNNQLFRFPATSPLKTFPQRHTEIKKTNTEYFSKDKDGIFKLRNLSQKTSKKRGLHFSQENTEKINHERITNEDLEIAPDNQEISQEDVEEVWRYVIMIYLQTILSLPSIEELLNPNQVIPQYIMYNMANTSKHGVVILQDKSDDLPHWVLSAMKCLANWPRSNDTNNLTYVGFERDVFKTIADYFLNLPEPLLTFEYYELFVNILVVCGYITVSDRTSGIHKIQDDPRSSKIHDLSNLNSFKSTECLLLSLLYKDKSNEELDSTKRLQRNDQGFQERCAKKMQLDNLRNRRASANDIMGGSCHNLIGLSNTNALSSNIKPRCSSLEGIVDRPVNSSEKKSSIFYQSVLNIEEQNSKQSLVSAPKQTPLFNLHSDENAQQPHCVGFNRTSALTVQDQEELCNEKYKSKQLCRSQSLLLRSSTRQNSCINKPVAEIIMKPNVGQGSTSELGESSTTINKRLCKSTIELSEKSLPPAASVLTGTQSLLQPHLERVAINALQLCCLLLPPPNRRKLQLLMRMISRMSQNVDMPKLHEQIGTRSLMINTFSRCVLCCAEEVDLDELLASRLVSFLMDHHQEILQVPTYLQAAVEKHLDYIKKGNVKNHGDGLVVPLPTYSYCKQISAKEFDEQKISTSQAAIAELLENIVRSKSLSLKEKRRKLKQKEYPLIYQKRFPTTESEAALFDDKPTIKQPMLNLRNPKLHSLRY", "length": 804 }, "evidence": [ { "id": "A0A287B5S3", "url": "https://omabrowser.org/oma/group/A0A287B5S3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "A0A287B5S3", "url": "https://www.uniprot.org/uniprotkb/A0A287B5S3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "A0A287B5S3", "url": "https://www.uniprot.org/uniprotkb/A0A287B5S3" } ], "pmid": "" }, { "name": "negative regulation of DNA-templated transcription", "id": "GO:0045892", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045892", "evidence": [ { "database": "UniProtKB", "id": "A0A287B5S3", "url": "https://www.uniprot.org/uniprotkb/A0A287B5S3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A287B5S3", "url": "https://www.uniprot.org/uniprotkb/A0A287B5S3" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A287B5S3", "url": "https://www.uniprot.org/uniprotkb/A0A287B5S3" } ], "pmid": "" }, { "name": "fibrillar center", "id": "GO:0001650", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001650", "evidence": [ { "database": "UniProtKB", "id": "A0A287B5S3", "url": "https://www.uniprot.org/uniprotkb/A0A287B5S3" } ], "pmid": "" }, { "name": "transcription repressor complex", "id": "GO:0017053", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017053", "evidence": [ { "database": "UniProtKB", "id": "A0A287B5S3", "url": "https://www.uniprot.org/uniprotkb/A0A287B5S3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 171, "end_pos": 173, "annotation": "n_glycosylation_sequon" }, { "start_pos": 174, "end_pos": 176, "annotation": "n_glycosylation_sequon" }, { "start_pos": 379, "end_pos": 381, "annotation": "n_glycosylation_sequon" }, { "start_pos": 3, "end_pos": 5, "annotation": "n_glycosylation_sequon" }, { "start_pos": 59, "end_pos": 61, "annotation": "n_glycosylation_sequon" }, { "start_pos": 699, "end_pos": 701, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287B5S3-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 759, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287B5S3-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287B5S3" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287B5S3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B5S3" }, { "id": "PS50186", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50186" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DEP", "eco_id": "ECO_0000259", "start_pos": 24, "end_pos": 117, "start_aa": "Phe", "end_aa": "Glu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 171, "end_pos": 173 }, { "start_pos": 174, "end_pos": 176 }, { "start_pos": 379, "end_pos": 381 }, { "start_pos": 3, "end_pos": 5 }, { "start_pos": 59, "end_pos": 61 }, { "start_pos": 699, "end_pos": 701 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", 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"total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287BB92-1", "uniprot_ac": "A0A287BB92", "uniprot_id": "A0A287BB92_PIG", "mass": { "chemical_mass": 72101.0, "monoisotopic_mass": 72101.0 }, "refseq": { "ac": "XP_020924950", "name": "myotubularin-related protein 14 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020924950" }, "gene_names": [ { "name": "MTMR14", "type": "recommended", "evidence": [ { "id": "A0A287BB92", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BB92" } ] }, { "name": "MTMR14", "type": "synonym", "evidence": [ { "id": "XP_020924950", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020924950" } ] } ], "protein_names": [ { "name": "Myotubularin related protein 14", "type": "synonym", "evidence": [ { "id": "A0A287BB92", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BB92/entry#names_and_taxonomy" } ] }, { "name": "myotubularin-related protein 14 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020924950", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020924950" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BB92", "url": "https://www.uniprot.org/uniprotkb/A0A287BB92" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MTMR14", "url": "https://www.uniprot.org/uniprotkb/A0A287BB92", "locus": { "chromosome": "13", "start_pos": 65994820, "end_pos": 65948544, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011546", "url": "https://www.ensembl.org/id/ENSSSCG00000011546" } ] } } ], "crossref": [ { "id": "A0A287BB92", "url": "https://alphafold.ebi.ac.uk/entry/A0A287BB92", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000011546", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011546", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd13213", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13213", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100157480", "url": "https://www.ncbi.nlm.nih.gov/gene/100157480", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR016130", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016130", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029021", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029021", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039802", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039802", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039803", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039803", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100157480", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157480", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287BB92", "url": "https://www.orthodb.org/?gene=A0A287BB92", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13524", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13524", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13524:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13524:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "R-SSC-1632852", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1632852", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-1660499", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1660499", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020924950", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020924950", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AG95", "url": "https://www.uniprot.org/uniprotkb/A0A287AG95", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AG95-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AG95-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ARH3", "url": "https://www.uniprot.org/uniprotkb/A0A287ARH3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ARH3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ARH3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6C9", "url": "https://www.uniprot.org/uniprotkb/A0A287B6C9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6C9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6C9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BB92", "url": "https://www.uniprot.org/uniprotkb/A0A287BB92", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BB92-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BB92-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BBA3", "url": "https://www.uniprot.org/uniprotkb/A0A287BBA3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BBA3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBA3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BIN6", "url": "https://www.uniprot.org/uniprotkb/A0A287BIN6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BIN6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BIN6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAGARAAAAASAGSSASSGNPQPQEPGLGELLEEFSRTQYRAKDFSGTGGSKVERIEKRCLELFGRDYCYSVIQNVNGDICGHYPQHIVFLEYESSEKEKDTFQSTVQVSKLQDLVNRSKTARCRGRFVCPVILFKGKHICRSATLAGWGELYGRTGYNYIFSGGADDAWADVEDVTEEDGALRSSDTHLFDKVRGYDIKLLRYLSVKYICDLMVENKKVKFGMNVTSSEKVDKAQRYADFTLLSIPYPGCEFFKEYKDRDYMAEGLIFNWKQDYVDAPLSIPDFLTCSLNIDWSQYQSWDLVQQTQNYLKLLLSIINSDDDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHASLKPAEILYLTVAYDWFLFGHMLVDRLSKGEEIFFFCFNFLKHIISEEFSALKTQRRKSLPARDAGFTVEDICMLRRKDRGSTTSLGSDFSLVMESSPGAAGSFTYETVELVPAGAQTQAAWRKSHSSSPQSVLWNRPQSSEDRLFSHQGLVEAKSSSSSSSNHSDNFFRMGSSPLEVPKPRSVDHPLPGSSLSTDFGSWQMVTGCGSIQERAVLHTDSSLPFSFPDELPNNCLLAALSERETRLQEVRSAFLAAYSSTVGLRAAAPSPSGAIGGLLEQFVRGVGLRGTSSSTL", "length": 649, "header": "tr|A0A287BB92-1|A0A287BB92_PIG Isoform 1 of Myotubularin related protein 14 OS=Sus scrofa OX=9823 GN=MTMR14 PE=4 SV=1 CANONICAL=A0A287BB92-1" }, "isoforms": [ { "isoform_ac": "A0A287AG95-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AG95/entry", "sequence": { "sequence": "MAGARAAAAASAGSSASSGNPQPQEPGLGELLEEFSRTQYRAKDFSGTGGSKVERIEKRCLELFGRDYCYSVIQNVNGDICGHYPQHIVFLEYESSEKEKDTFQSTVQVSKLQDLVNRSKTARCRGRFVCPVILFKGKHICRSATLAGWGELYGRTGYNYIFSGGADDAWADVEDVTEEDGALRSSDTHLFDKVRGYDIKLLRYLSVKYICDLMVENKKVKFGMNVTSSEKVDKAQRYADFTLLSIPYPGCEFFKEYKDRDYMAEGLIFNWKQDYVDAPLSIPDFLTCSLNIDWSQYQSWDLVQQTQNYLKLLLSIINSDDDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHASLKPAEILYLTVAYDWFLFGRKSLPARDAGFTVEDICMLRRKDRGSTTSLGSDFSLVMESSPGAAGSFTYETVELVPAGAQTQAAWRKSHSSSPQSVLWNRPQSSEDRLFSHQGLVEAKSSSSSSSNHSDNFFRMGSSPLEVPKPRSVDHPLPGSSLSTDFGSWQMVTGCGSIQERAVLHTDSSLPFSFPDELPNNCLLAALSERETRLQEVRSAFLAAYSSTVGLRAAAPSPSGAIGGLLEQFVRGVGLRGTSSSTL", "length": 613, "header": "tr|A0A287AG95-1|A0A287BB92_PIG Computationally mapped isoform of Myotubularin related protein 14 OS=Sus scrofa OX=9823 GN=MTMR14 PE=4 SV=1 CANONICAL=A0A287BB92-1" }, "locus": { "chromosome": "13", "start_pos": 65993816, "end_pos": 65948671, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054604.3", "url": "https://www.ensembl.org/id/ENSSSCT00000054604.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000042922.1", "url": "https://www.ensembl.org/id/ENSSSCP00000042922.1" } ] } }, { "isoform_ac": "A0A287ARH3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ARH3/entry", "sequence": { "sequence": "MAGARAAAAASAGSSASSGNPQPQEPGLGELLEEFSRTQYRAKDFSGTGGSKVERIEKRCLELFGRDYCYSVIQNVNGDICGHYPQHIVFLEYESSEKEKDTFQSTVQVSKLQDLVNRSKTARCRGRFVCPVILFKGKHICRSATLAGWGELYGRTGYNYIFSGGADDAWADVEDVTEEDGALRSSDTHLFDKVRGYDIKLLRYLSVKYICDLMVENKKVKFGMNVTSSEKVDKAQRYADFTLLSIPYPGCEFFKEYKDRDYMAEGLIFNWKQDYVDAPLSIPDFLTCSLNIDWSQYQSWDLVQQTQNYLKLLLSIINSDDDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHASLKPAEILYLTVAYDWFLFGHMLVDRLSKGEEIFFFCFNFLKHIISEEFSALKTQRRKSLPARDAGFTVEDICMLRRKDRGSTTSLGSDFSLVMESSPGAAGSFTYETVELVPAGAQTQAAWRKSHSSSPQSVLWNRPQSSEDRLFSHQGLVEAKSSSSSSSNHSDNFFRMGSSPLEVPKPRLAALSERETRLQEVRSAFLAAYSSTVGLRAAAPSPSGAIGGLLEQFVRGVGLRGTSSSTL", "length": 597, "header": "tr|A0A287ARH3-1|A0A287BB92_PIG Computationally mapped isoform of Myotubularin related protein 14 OS=Sus scrofa OX=9823 GN=MTMR14 PE=4 SV=1 CANONICAL=A0A287BB92-1" }, "locus": { "chromosome": "13", "start_pos": 65993816, "end_pos": 65948671, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044434.3", "url": "https://www.ensembl.org/id/ENSSSCT00000044434.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046503.1", "url": "https://www.ensembl.org/id/ENSSSCP00000046503.1" } ] } }, { "isoform_ac": "A0A287B6C9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6C9/entry", "sequence": { "sequence": "MAGARAAAAASAGSSASSGNPQPQEPGLGELLEEFSRTQYRAKDFSGTGGSKVERIEKRCLELFGRDYCYSVIQNVNGDICGHYPQHIVFLEYESSEKEKDTFQSTVQVSKLQDLVNRSKTARCRGRFVCPVILFKGKHICRSATLAGWGELYGRTGYNYIFSGGADDAWADVEDVTEEDGALRSSDTHLFDKVRGYDIKLLRYLSVKYICDLMVENKKVKFGMNVTSSEKVDKAQRYADFTLLSIPYPGCEFFKEYKDRDYMAEGLIFNWKQDYVDAPLSIPDFLTCSLNIDWSQYQSWDLVQQTQNYLKLLLSIINSDDDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHASLKPAEILYLTVAYDWFLFGHMLVDRLSKGEEEEEFASPGCRLHRGRYLHAESVDHPLPGSSLSTDFGSWQMVTGCGSIQERAVLHTDSSLPFSFPDELPNNCLLAALSERETRLQEVRSAFLAAYSSTVGLRAAAPSPSGAIGGLLEQFVRGVGLRGTSSSTL", "length": 519, "header": "tr|A0A287B6C9-1|A0A287B6C9_PIG Computationally mapped isoform of Myotubularin related protein 14 OS=Sus scrofa OX=9823 GN=MTMR14 PE=4 SV=2 CANONICAL=A0A287BB92-1" }, "locus": { "chromosome": "13", "start_pos": 65993816, "end_pos": 65948671, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061346.2", "url": "https://www.ensembl.org/id/ENSSSCT00000061346.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052071.2", "url": "https://www.ensembl.org/id/ENSSSCP00000052071.2" } ] } }, { "isoform_ac": "A0A287BB92-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BB92/entry", "sequence": { "sequence": "MAGARAAAAASAGSSASSGNPQPQEPGLGELLEEFSRTQYRAKDFSGTGGSKVERIEKRCLELFGRDYCYSVIQNVNGDICGHYPQHIVFLEYESSEKEKDTFQSTVQVSKLQDLVNRSKTARCRGRFVCPVILFKGKHICRSATLAGWGELYGRTGYNYIFSGGADDAWADVEDVTEEDGALRSSDTHLFDKVRGYDIKLLRYLSVKYICDLMVENKKVKFGMNVTSSEKVDKAQRYADFTLLSIPYPGCEFFKEYKDRDYMAEGLIFNWKQDYVDAPLSIPDFLTCSLNIDWSQYQSWDLVQQTQNYLKLLLSIINSDDDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHASLKPAEILYLTVAYDWFLFGHMLVDRLSKGEEIFFFCFNFLKHIISEEFSALKTQRRKSLPARDAGFTVEDICMLRRKDRGSTTSLGSDFSLVMESSPGAAGSFTYETVELVPAGAQTQAAWRKSHSSSPQSVLWNRPQSSEDRLFSHQGLVEAKSSSSSSSNHSDNFFRMGSSPLEVPKPRSVDHPLPGSSLSTDFGSWQMVTGCGSIQERAVLHTDSSLPFSFPDELPNNCLLAALSERETRLQEVRSAFLAAYSSTVGLRAAAPSPSGAIGGLLEQFVRGVGLRGTSSSTL", "length": 649, "header": "tr|A0A287BB92-1|A0A287BB92_PIG Isoform 1 of Myotubularin related protein 14 OS=Sus scrofa OX=9823 GN=MTMR14 PE=4 SV=1 CANONICAL=A0A287BB92-1" }, "locus": { "chromosome": "13", "start_pos": 65993816, "end_pos": 65948671, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049813.3", "url": "https://www.ensembl.org/id/ENSSSCT00000049813.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053604.1", "url": "https://www.ensembl.org/id/ENSSSCP00000053604.1" } ] } }, { "isoform_ac": "A0A287BBA3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBA3/entry", "sequence": { "sequence": "MAGARAAAAASAGSSASSGNPQPQEPGLGELLEEFSRTQYRAKDFSGTGGSKSWDLVQQTQNYLKLLLSIINSDDDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHASLKPAEILYLTVAYDWFLFGHMLVDRLSKGEEIFFFCFNFLKHIISEEFSALKTQRRKSLPARDAGFTVEDICMLRRKDRGSTTSLGSDFSLVMESSPGAAGSFTYETVELVPAGAQTQAAWLAALSERETRLQEVRSAFLAAYSSTVGLRAAAPSPSGAIGGLLEQFVRGVGLRGTSSSTL", "length": 291, "header": "tr|A0A287BBA3-1|A0A287BBA3_PIG Computationally mapped isoform of Myotubularin related protein 14 OS=Sus scrofa OX=9823 GN=MTMR14 PE=4 SV=1 CANONICAL=A0A287BB92-1" }, "locus": { "chromosome": "13", "start_pos": 65993816, "end_pos": 65948671, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045385.3", "url": "https://www.ensembl.org/id/ENSSSCT00000045385.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053798.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053798.2" } ] } }, { "isoform_ac": "A0A287BIN6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BIN6/entry", "sequence": { "sequence": "MAGARAAAAASAGSSASSGNPQPQEPGLGELLEEFSRTQYRAKDFSGTGGSKVERIEKRCLELFGRDYCYSVIQNVNGDICGHYPQHIVFLEYESSEKEKDTFQSTVQVSKLQDLVNRSKTARCRGRFVCPVILFKGKHICRSATLAGWGELYGRTGYNYIFSGGADDAWADVEDVTEEDGALRSSDTHLFDKVRGYDIKLLRYLSVKYICDLMVENKKVKFGMNVTSSEKVDKAQRYADFTLLSIPYPGCEFFKEYKDRDYMAEGLIFNWKQDYVDAPLSIPDFLTCSLNIDWSQYQSWDLVQQTQNYLKLLLSIINSDDDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHASLKPAEILYLTVAYDWFLFGHMLVDRLSKGEEIFFFCFNFLKHIISEEFSALKTQRRKSLPARDAGFTVEDICMLRRKDRGSTTSLGSDFSLVMESSPGAAGSFTYETVELVPAGAQTQAAWLAALSERETRLQEVRSAFLAAYSSTVGLRAAAPSPSGAIGGLLEQFVRGVGLRGTSSSTL", "length": 537, "header": "tr|A0A287BIN6-1|A0A287BIN6_PIG Computationally mapped isoform of Myotubularin related protein 14 OS=Sus scrofa OX=9823 GN=MTMR14 PE=4 SV=1 CANONICAL=A0A287BB92-1" }, "locus": { "chromosome": "13", "start_pos": 65993816, "end_pos": 65948671, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051621.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051621.3" }, { "database": "Ensembl Peptide", 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"32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100157480", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157480", "resource": "KEGG Pathway" }, { "id": "R-SSC-1632852", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1632852", "resource": "Reactome", "description": "Macroautophagy" }, { "id": "R-SSC-1660499", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1660499", "resource": "Reactome", "description": "Synthesis of PIPs at the plasma membrane" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "phosphatidylinositol-3-phosphate phosphatase activity", "id": "GO:0004438", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004438", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB92", "url": "https://www.uniprot.org/uniprotkb/A0A287BB92" } ], "pmid": "" }, { "name": 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"database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287B602", "url": "https://www.orthodb.org/?gene=A0A287B602", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR16515", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16515", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16515:SF57", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16515:SF57", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47772", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47772", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47772:SF12", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47772:SF12", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01352", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01352", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005671043", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005671043", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AGH1", "url": "https://www.uniprot.org/uniprotkb/A0A287AGH1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AGH1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AGH1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B602", "url": "https://www.uniprot.org/uniprotkb/A0A287B602", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B602-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B602-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MITSQGALSFRDVTVGFTQEEWQHLDPAQRTLYRDVMLENYSHLVSVGYCVPEPEVILKLEQGEEPWVLEEEFSSQSYPELINSSRTYSRKVFNKGRKWFHDEKHERIHSEEKLYEYNKNENCLCLNEDSVQHQKIPVLDQPFKYNECRKAFHENSLFVIHKKLHTEQKTCKYREYRRTFCDISSLSAHQRTYPKGNHYEFNECGENFFDKSIFFEHSVHPLSQESNLIPIQRIHSVDNIIEYNEYGNFFNEKLVFGVQQNIHTGEEPYKCHKCGKTFNQKSSHTRHQRTHTGEKSCECHECGKTFYKNSDLIKHQRIHTGEKPYECQECGKSFSEKSTLTQHHRTHTGEKPYECQECGKSFSFKSVLTVHQKTHTGEKPYECYECGKAFLRKSDLVKHQRTHTGEKPYECNECGKSFSEKSTLTKHLRTHTGEKPYECIECGKFFCYYSGFTEHQRRHTGEKPFRCNECGKNFRQKSALIVHQRTHVIQKPYECNECGKSFCVKSKLIAHYRTHTGEKPYECNICGKSFYVKSKLTVHQRTHLGKNVINVINEGDHCG", "length": 559, "header": "tr|A0A287B602-1|A0A287B602_PIG Isoform 1 of Zinc finger protein 37A OS=Sus scrofa OX=9823 GN=ZNF37A PE=3 SV=1 CANONICAL=A0A287B602-1" }, "isoforms": [ { "isoform_ac": "A0A287AGH1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AGH1/entry", "sequence": { "sequence": "FSHIQGAAWSEASLYSHSFCTLPRPAENDHIPGYCVPEPEVILKLEQGEEPWVLEEEFSSQSYPELINSSRTYSRKVFNKGRKWFHDEKHERIHSEEKLYEYNKNENCLCLNEDSVQHQKIPVLDQPFKYNECRKAFHENSLFVIHKKLHTEQKTCKYREYRRTFCDISSLSAHQRTYPKGNHYEFNECGENFFDKSIFFEHSVHPLSQESNLIPIQRIHSVDNIIEYNEYGNFFNEKLVFGVQQNIHTGEEPYKCHKCGKTFNQKSSHTRHQRTHTGEKSCECHECGKTFYKNSDLIKHQRIHTGEKPYECQECGKSFSEKSTLTQHHRTHTGEKPYECQECGKSFSFKSVLTVHQKTHTGEKPYECYECGKAFLRKSDLVKHQRTHTGEKPYECNECGKSFSEKSTLTKHLRTHTGEKPYECIECGKFFCYYSGFTEHQRRHTGEKPFRCNECGKNFRQKSALIVHQRTHVIQKPYECNECGKSFCVKSKLIAHYRTHTGEKPYECNICGKSFYVKSKLTVHQRTHLGKNVINVINEGDHCG", "length": 544, "header": "tr|A0A287AGH1-1|A0A287B602_PIG Computationally mapped isoform of Zinc finger protein 37A OS=Sus scrofa OX=9823 GN=ZNF37A PE=3 SV=1 CANONICAL=A0A287B602-1" }, "locus": { "chromosome": "14", "start_pos": 60861415, "end_pos": 60797263, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049342.3", "url": "https://www.ensembl.org/id/ENSSSCT00000049342.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043070.1", "url": "https://www.ensembl.org/id/ENSSSCP00000043070.1" } ] } }, { "isoform_ac": "A0A287B602-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B602/entry", "sequence": { "sequence": "MITSQGALSFRDVTVGFTQEEWQHLDPAQRTLYRDVMLENYSHLVSVGYCVPEPEVILKLEQGEEPWVLEEEFSSQSYPELINSSRTYSRKVFNKGRKWFHDEKHERIHSEEKLYEYNKNENCLCLNEDSVQHQKIPVLDQPFKYNECRKAFHENSLFVIHKKLHTEQKTCKYREYRRTFCDISSLSAHQRTYPKGNHYEFNECGENFFDKSIFFEHSVHPLSQESNLIPIQRIHSVDNIIEYNEYGNFFNEKLVFGVQQNIHTGEEPYKCHKCGKTFNQKSSHTRHQRTHTGEKSCECHECGKTFYKNSDLIKHQRIHTGEKPYECQECGKSFSEKSTLTQHHRTHTGEKPYECQECGKSFSFKSVLTVHQKTHTGEKPYECYECGKAFLRKSDLVKHQRTHTGEKPYECNECGKSFSEKSTLTKHLRTHTGEKPYECIECGKFFCYYSGFTEHQRRHTGEKPFRCNECGKNFRQKSALIVHQRTHVIQKPYECNECGKSFCVKSKLIAHYRTHTGEKPYECNICGKSFYVKSKLTVHQRTHLGKNVINVINEGDHCG", "length": 559, "header": "tr|A0A287B602-1|A0A287B602_PIG Isoform 1 of Zinc finger protein 37A OS=Sus scrofa OX=9823 GN=ZNF37A PE=3 SV=1 CANONICAL=A0A287B602-1" }, "locus": { "chromosome": "14", "start_pos": 60859418, "end_pos": 60797263, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044725.1", "url": "https://www.ensembl.org/id/ENSSSCT00000044725.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051887.1", "url": "https://www.ensembl.org/id/ENSSSCP00000051887.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287AGH1", "url": "https://www.uniprot.org/uniprotkb/A0A287AGH1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152623", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152623", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "P17032-1", "protein_name": "Zinc finger protein 37A", "gene_name": "ZNF37A", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"A0A287B602", "url": "https://www.uniprot.org/uniprotkb/A0A287B602" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A287B602", "url": "https://www.uniprot.org/uniprotkb/A0A287B602" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A287B602", "url": "https://www.uniprot.org/uniprotkb/A0A287B602" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A287B602", "url": "https://www.uniprot.org/uniprotkb/A0A287B602" } ], "pmid": "" }, { "name": "RNA polymerase II transcription regulatory region sequence-specific DNA binding", "id": "GO:0000977", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000977", "evidence": [ { "database": "UniProtKB", "id": "A0A287B602", "url": "https://www.uniprot.org/uniprotkb/A0A287B602" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "A0A287B602", "url": "https://www.uniprot.org/uniprotkb/A0A287B602" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A287B602", "url": "https://www.uniprot.org/uniprotkb/A0A287B602" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "A0A287B602", "url": 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85 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287BA07-1", "uniprot_ac": "A0A287BA07", "uniprot_id": "A0A287BA07_PIG", "mass": { "chemical_mass": 45590.0, "monoisotopic_mass": 45590.0 }, "refseq": {}, "gene_names": [ { "name": "ZNF362", "type": "recommended", "evidence": [ { "id": "A0A287BA07", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BA07" } ] } ], "protein_names": [ { "name": "Zinc finger protein 362", "type": "synonym", "evidence": [ { "id": "A0A287BA07", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BA07/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BA07", "url": "https://www.uniprot.org/uniprotkb/A0A287BA07" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZNF362", "url": "https://www.uniprot.org/uniprotkb/A0A287BA07", "locus": { "chromosome": "6", "start_pos": 89554930, "end_pos": 89513851, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000032078", "url": "https://www.ensembl.org/id/ENSSSCG00000032078" } ] } } ], "crossref": [ { "id": "A0A287BA07", "url": "https://alphafold.ebi.ac.uk/entry/A0A287BA07", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000032078", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000032078", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR14003", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14003", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14003:SF19", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14003:SF19", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287AHH9", "url": "https://www.uniprot.org/uniprotkb/A0A287AHH9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AHH9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AHH9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BA07", "url": "https://www.uniprot.org/uniprotkb/A0A287BA07", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BA07-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BA07-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F950", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F950", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F950-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F950-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVFFLWGPLREAMAEPRFNNPYFWPPPPTMPSQLDNLVLINKIKEQLMAEKIRPPHLPPTSASSQQPLLVPPAPAESSQAVMSLPKLQQVPGLHPQAVPQPDVALHARPATSTVTGLGLSSRTPAVSTSESSAGTGTSTPSTPTTTSQSRLIASSPTLISGITSPPLLDSIKTIQGHGLLGPPKSERGRKKIKAENPGGPPVLVVPYPILASGETAKEGKTYRCKVCPLTFFTKSEMQIHSKSHTEAKPHKCPHCSKSFANASYLAQHLRIHLGVKPYHCSYCDKSFRQLSHLQQHTRIHTGDRPYKCPHPGCEKAFTQLSNLQSHQRQHNKDKPYKCPNCYRAYSDSASLQIHLSAHAIKHAKAYCCSMCGRAYTSETYLMKHMSKHTVVEHLVSHHSPQRTESPGIPVRISLI", "length": 415, "header": "tr|A0A287BA07-1|A0A287BA07_PIG Isoform 1 of Zinc finger protein 362 OS=Sus scrofa OX=9823 GN=ZNF362 PE=3 SV=2 CANONICAL=A0A287BA07-1" }, "isoforms": [ { "isoform_ac": "A0A287AHH9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AHH9/entry", "sequence": { "sequence": "MALSVHRVHATGPWGAWMSRSSPSGKGHSRMAEPRFNNPYFWPPPPTMPSQLDNLVLINKIKEQLMAEKIRPPHLPPTSASSQQPLLVPPAPAESSQAVMSLPKLQQVPGLHPQAVPQPDVALHARPATSTVTGLGLSSRTPAVSTSESSAGTGTSTPSTPTTTSQSRLIASSPTLISGITSPPLLDSIKTIQGHGLLGPPKSERGRKKIKAENPGGPPVLVVPYPILASGETAKEGKTYRCKVCPLTFFTKSEMQIHSKSHTEAKPHKCPHCSKSFANASYLAQHLRIHLGVKPYHCSYCDKSFRQLSHLQQHTRIHTGDRPYKCPHPGCEKAFTQLSNLQSHQRQHNKDKPYKCPNCYRAYSDSASLQIHLSAHAIKHAKAYCCSMCGRAYTSETYLMKHMSKHTVVEHLVSHHSPQRTESPGIPVRISLI", "length": 433, "header": "tr|A0A287AHH9-1|A0A287BA07_PIG Computationally mapped isoform of Zinc finger protein 362 OS=Sus scrofa OX=9823 GN=ZNF362 PE=3 SV=2 CANONICAL=A0A287BA07-1" }, "locus": { "chromosome": "6", "start_pos": 89553449, "end_pos": 89521970, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044781.3", "url": "https://www.ensembl.org/id/ENSSSCT00000044781.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043492.3", "url": "https://www.ensembl.org/id/ENSSSCP00000043492.3" } ] } }, { "isoform_ac": "A0A287BA07-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BA07/entry", "sequence": { "sequence": "MVFFLWGPLREAMAEPRFNNPYFWPPPPTMPSQLDNLVLINKIKEQLMAEKIRPPHLPPTSASSQQPLLVPPAPAESSQAVMSLPKLQQVPGLHPQAVPQPDVALHARPATSTVTGLGLSSRTPAVSTSESSAGTGTSTPSTPTTTSQSRLIASSPTLISGITSPPLLDSIKTIQGHGLLGPPKSERGRKKIKAENPGGPPVLVVPYPILASGETAKEGKTYRCKVCPLTFFTKSEMQIHSKSHTEAKPHKCPHCSKSFANASYLAQHLRIHLGVKPYHCSYCDKSFRQLSHLQQHTRIHTGDRPYKCPHPGCEKAFTQLSNLQSHQRQHNKDKPYKCPNCYRAYSDSASLQIHLSAHAIKHAKAYCCSMCGRAYTSETYLMKHMSKHTVVEHLVSHHSPQRTESPGIPVRISLI", "length": 415, "header": "tr|A0A287BA07-1|A0A287BA07_PIG Isoform 1 of Zinc finger protein 362 OS=Sus scrofa OX=9823 GN=ZNF362 PE=3 SV=2 CANONICAL=A0A287BA07-1" }, "locus": { "chromosome": "6", "start_pos": 89553449, "end_pos": 89533431, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047669.2", "url": "https://www.ensembl.org/id/ENSSSCT00000047669.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053371.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053371.2" } ] } }, { "isoform_ac": "A0A8W4F950-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F950/entry", "sequence": { "sequence": "MAEASSAPSPSGKGHSRMAEPRFNNPYFWPPPPTMPSQLDNLVLINKIKEQLMAEKIRPPHLPPTSASSQQPLLVPPAPAESSQAVMSLPKLQQVPGLHPQAVPQPDVALHARPATSTVTGLGLSSRTPAVSTSESSAGTGTSTPSTPTTTSQSRLIASSPTLISGITSPPLLDSIKTIQGHGLLGPPKSERGRKKIKAENPGGPPVLVVPYPILASGETAKEGKTYRCKVCPLTFFTKSEMQIHSKSHTEAKPHKCPHCSKSFANASYLAQHLRIHLGVKPYHCSYCDKSFRQLSHLQQHTRIHTGDRPYKCPHPGCEKAFTQLSNLQSHQRQHNKDKPYKCPNCYRAYSDSASLQIHLSAHAIKHAKAYCCSMCGRAYTSETYLMKHMSKHTVVEHLVSHHSPQRTESPGIPVRISLI", "length": 420, "header": "tr|A0A8W4F950-1|A0A287BA07_PIG Computationally mapped isoform of Zinc finger protein 362 OS=Sus scrofa OX=9823 GN=ZNF362 PE=3 SV=1 CANONICAL=A0A287BA07-1" }, "locus": { "chromosome": "6", "start_pos": 89553449, "end_pos": 89521930, "strand": "-", 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"title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4F950", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F950" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ 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"MIMTESGEVIDLDLPAETSQEQEDLLIVKVEEEDCTWMQEYNPPAFETFYQRFKHFQYHEASGPREALSQLRVLCCEWLRPELHTKEQILELLVLEQFLTILPEEFQTWVREHHPESGEEAVAVVESIQRELEERRQQIVACPEGLPQKRVLPGAEPESFSHQLLSVEPQPEQEPQKPHLLEEQALPALQVPSLPLKDSQELTASLLSAGSQKLVKIEDVADVAVSFILEEWGHLDPSQKSLCRDDRKENYGSIPSMDYESRNDNVELRVKQVSDEAEAPWMTSGSPGSTAAPSQGFAEVSELQGVVERWQVSPAGGKSRQNPSQKREPVPDGNRKPNTSGERGHRCNDCGKFFLQASNFIQHRRIHTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPYKCQVCGKAFRVSSHLVQHHSVHSRERPYGCPECGKSFGRHSHLIEHLKRHFREKPQRCSDKRSKTTKLNVKKRISEFSEAEGRIQRSISQGQDFGDGREHQGTLERKQGIPRKELLGQPSSKRMNFSDVAYVHKKSSTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPFRCDECGKSYNQRVHLTQHQRVHTGEKPYTCPLCGKAFRVRSHLVQHQSVHSGERPFKCSECGKGFGRRSHLAGHLRLHSREKSHQCHECGEIFFQYVSLIEHQVLHMGPKNEQNGIREEAYSWNLTVIEDKKLELQEQPYKCDVCGKAFRYSSDLIQHYRTHTAEKAAKCDTCRESGGPCSHVKPHPKSCSTLKAHQCTECGRGFTLKSHLNQHQRIHTGEKPFQCKECGMSFSWSCSLFKHLRSHERTDPINAFSG", "length": 829, "header": "tr|A0A287BF03-1|A0A287BF03_PIG Isoform 1 of Zinc finger with KRAB and SCAN domains 5 OS=Sus scrofa OX=9823 GN=ZKSCAN5 PE=3 SV=1 CANONICAL=A0A287BF03-1" }, "locus": { "chromosome": "3", "start_pos": 6463385, "end_pos": 6444441, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054479.3", "url": "https://www.ensembl.org/id/ENSSSCT00000054479.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054705.1", "url": "https://www.ensembl.org/id/ENSSSCP00000054705.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287AIA4", "url": "https://www.uniprot.org/uniprotkb/A0A287AIA4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100522312", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522312", "resource": "KEGG Pathway" }, { "id": "R-SSC-212436", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "resource": "Reactome", "description": "Generic Transcription Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A061IC59-1", "protein_name": "Zinc finger protein with KRAB and SCAN domains 5", "gene_name": "Zkscan5", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MIMTESRAVIHLEPPAETSSQEQADLLIVKVEEEDCSWMQGYNRPVFETFYQRFKHFQYHEAAGPRDALSQLRVLCCEWLRPELHTKEQILELLVLEQFLTILPEEFQAWVREHHPESGEEAVAVIESIQRELEERRQQITTCPEVLPQKTVPSGATQEPFSHQFLPVEAQSDQEPQNLLEGNALSVLQVPSIPPEDSQGLTAPLLATGSQKLVKIEDVADVAVSFILEEWGHLDQSQKSLSRDGREENCESITPVDYESREGNSELMVQQVSDGADSHWVAAESREKNGAQSQEFAEGSDLKDMAQRWQVYPTVGKSRQKRALNSGPHVSRKQKSNGERGHRCADCGKFFLQASNFIQHRRIHTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPYGCNECGKSFGRHSHLIEHLKRHFREKSQSCSDKRSKNTKLNIKKIPEFSEADMELSEEIQTNASQVQGYSEDYEHQDRAGRQQGTVMKEQPSSKSMNCNDFSYVHKKSSSERPHKCNECGKSFIQSAHLIQHRRIHTGEKPFRCEECGKSYNQRVHLTQHHRVHTGEKPYTCHLCGKAFRVRSHLVQHQSVHSRERPFKCNECGKGFGRRSHLAGHLRLHSREKSHQCHECGEIFFQYVSLLEHQVLHVGQKSEKNSVCDEAYSWNLTVIEDKKLELQEQPYQCDTCGKAFSYSSDLIQHYRTHTAEKPQKCDACRDSAGQCPHTKQHQKICTSGKSHQCNECGRGFSLKSHLSQHQRIHTGEKPFQCKECGMSFSWSCSLFKHLRSHERTDS", "length": 819 }, "evidence": [ { "id": "A0A287BF03", "url": "https://omabrowser.org/oma/group/A0A287BF03/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A0G2K008-1", "protein_name": "Zinc finger protein with KRAB and SCAN domains 5", "gene_name": "Zkscan5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTESRAVVHLEPPAETSQEQADLLIVKVEEEDCSWMQGYNRPVLETFYQRFKHFQYHEATGPRDALSQLRVLCCEWLRPELHTKEQILELLVLEQFLTILPEEFQAWVREHHPESGEEAVAVIESIQRELEERRQQIVTCPEVLPQKMVPPGATQESSSHQFLPVEAQSDQEPQNLLEENALPVLQVPSVPLKDSQEPTASLLSAGPQKLVKIEDVADVAVSFILEEWGHLDQSQKSLSRDGRKEDCERTTPVDYEPKEGNLELVVQQVSDAVDPHWVAAESTEQNSVQPQESAEVSDLKDTVQRWQVNPTWRNPRPKRSLSSGLDVNRKQKSNGERGHRCGDCGKFFLQASNFIQHRRIHTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPYGCSECGKSFGRHSHLIEHLKRHFREKSQRCSDRRSKDTKLNVQQIPGLSEADVEPSGEVQRNACEAEGHSEGCEYQDGAGGQEGVIMKETLGQSSSKRTDCNELSYVHKKPSPGERPHKCNECGKSFIQSAHLVQHRRIHTGEKPFRCEECGKSYNQRVHLTQHHRVHTGEKPYACHLCGKAFRVRSHLVQHQSVHSRERPFKCNECGKGFGRRSHLAGHLRLHSRDKSHQCHECGEIFFRYVSLLEHQMLHVGQKSGNNSVCEEAHSWNLTVMEDKKLELQGEQSPYQCDTCGKAFSYTSDLIQHYRAHSAEKPQKCDACRDSTSQCPHRRQPQKICPSGKSHQCSECGRGFGLKSHLSQHQRVHTGEKPFQCKECGMKFSWSCSLLKHLRSHERTDP", "length": 822 }, "evidence": [ { "id": "A0A287BF03", "url": "https://omabrowser.org/oma/group/A0A287BF03/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9Y2L8-1", "protein_name": "Zinc finger protein with KRAB and SCAN domains 5", "gene_name": "ZKSCAN5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MIMTESREVIDLDPPAETSQEQEDLFIVKVEEEDCTWMQEYNPPTFETFYQRFRHFQYHEASGPREALSQLRVLCCEWLRPELHTKEQILELLVLEQFLTILPEEFQPWVREHHPESGEEAVAVIENIQRELEERRQQIVACPDVLPRKMATPGAVQESCSPHPLTVDTQPEQAPQKPRLLEENALPVLQVPSLPLKDSQELTASLLSTGSQKLVKIEEVADVAVSFILEEWGHLDQSQKSLYRDDRKENYGSITSMGYESRDNMELIVKQISDDSESHWVAPEHTERSVPQDPDFAEVSDLKGMVQRWQVNPTVGKSRQNPSQKRDLDAITDISPKQSTHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSQRCSDKRSKNTKLSVKKKISEYSEADMELSGKTQRNVSQVQDFGEGCEFQGKLDRKQGIPMKEILGQPSSKRMNYSEVPYVHKKSSTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPFRCEECGKSYNQRVHLTQHQRVHTGEKPYTCPLCGKAFRVRSHLVQHQSVHSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNEKNGICEEAYSWNLTVIEDKKIELQEQPYQCDICGKAFGYSSDLIQHYRTHTAEKPYQCDICRENVGQCSHTKQHQKIYSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPINTLSVEGSLL", "length": 839 }, "evidence": [ { "id": "A0A287BF03", "url": "https://omabrowser.org/oma/group/A0A287BF03/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9Z1D8-1", "protein_name": "Zinc finger protein with KRAB and SCAN domains 5", "gene_name": "Zkscan5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIMTESRAVIHLEPPAETSQEQADLLIVKVEEEDCSWMQGYNRPVLETFYQRFKHFQYHEAAGPRDALSQLRVLCCEWLRPELHTKEQILELLVLEQFLTILPEEFQAWVREHHPESGEEAVAVIESIQRELEERRQQIATSPEVLPQKMVPPGATQESFSHQCLPVEAQPERESQNLLEENALPVLQVSSVPLKDSQELTDSLLSDGPQKLVKTEDVADVAVSFILEEWAHLDQSQKSLGRDSRKEDCESTTPVDYEPKEGNLEFTVQQVSDAADPHWVAAERTEKNGVQRPESGEVSDLKDMVPRWQVNPTSGNPRQKRPLRSGPDVNRKQKSNGERGHRCGDCGKFFLQASNFIQHRRIHTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPYGCNECGKSFGRHSHLIEHLKRHFREKSQRCSDRRSKNTKLNIKQIPGLSEADLELSGEVQRNACQAEGHSEGCEHQDGQQGVVMKETLGQSSSKRTDCNEFSYVHKKSSPGERPHQCNECGKSFIQSAHLIQHRRIHTGEKPFRCEECGKSYNQRVHLTQHHRVHTGEKPYACHLCGKAFRVRSHLVQHQSVHSRERPFKCNECGKGFGRRSHLAGHLRLHSRDKSHQCHECGEIFFQYVSLLEHQVLHVGQKSEKNGICEEAYSWNLTVIKDKKLELQEQPYQCDSCGKAFSYSSDLIQHYRTHSAEKPQKCDACRDSTCQCPHIKQQQKSCPSGKSHQCNECGRGFSLKSHLSQHQRIHTGEKPLQCKECGMSFSWSCSLFKHLRSHERTDP", "length": 819 }, "evidence": [ { "id": "A0A287BF03", "url": "https://omabrowser.org/oma/group/A0A287BF03/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF03", "url": "https://www.uniprot.org/uniprotkb/A0A287BF03" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF03", "url": "https://www.uniprot.org/uniprotkb/A0A287BF03" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF03", "url": "https://www.uniprot.org/uniprotkb/A0A287BF03" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF03", "url": "https://www.uniprot.org/uniprotkb/A0A287BF03" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF03", "url": "https://www.uniprot.org/uniprotkb/A0A287BF03" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF03", "url": "https://www.uniprot.org/uniprotkb/A0A287BF03" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF03", "url": "https://www.uniprot.org/uniprotkb/A0A287BF03" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 338, "end_pos": 340, "annotation": "n_glycosylation_sequon" }, { "start_pos": 526, "end_pos": 528, "annotation": "n_glycosylation_sequon" }, { "start_pos": 696, "end_pos": 698, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287BF03", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BF03" }, { "id": "PS50157", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50157" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2H2-type", "eco_id": "ECO_0000259", "start_pos": 345, "end_pos": 372, "start_aa": "His", "end_aa": "Pro", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A287BF03", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BF03" }, { "id": "PS50805", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50805" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "KRAB", "eco_id": "ECO_0000259", "start_pos": 218, "end_pos": 293, "start_aa": "Glu", "end_aa": "Pro", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A287BF03", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BF03" }, { "id": "PS50804", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50804" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SCAN box", "eco_id": "ECO_0000259", "start_pos": 51, "end_pos": 132, "start_aa": "Gln", "end_aa": "Leu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 338, "end_pos": 340 }, { "start_pos": 526, "end_pos": 528 }, { "start_pos": 696, "end_pos": 698 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287BCK9-1", "uniprot_ac": "A0A287BCK9", "uniprot_id": "A0A287BCK9_PIG", "mass": { "chemical_mass": 62329.0, "monoisotopic_mass": 62329.0 }, "refseq": { "ac": "XP_005654507", "name": "myelin expression factor 2 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005654507" }, "gene_names": [ { "name": "MYEF2", "type": "recommended", "evidence": [ { "id": "A0A287BCK9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BCK9" } ] }, { "name": "MYEF2", "type": "synonym", "evidence": [ { "id": "XP_005654507", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005654507" } ] } ], "protein_names": [ { "name": "Myelin expression factor 2", "type": "recommended", "evidence": [ { "id": "A0A287BCK9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BCK9/entry#names_and_taxonomy" } ] }, { "name": "myelin expression factor 2 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_005654507", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005654507" } ] } ], "function": [ { "annotation": "Transcriptional repressor of the myelin basic protein gene (MBP). Binds to the proximal MB1 element 5'-TTGTCC-3' of the MBP promoter. Its binding to MB1 and function are inhibited by PURA.", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCK9", "url": "https://www.uniprot.org/uniprotkb/A0A287BCK9#function" }, { "database": "UniProtKB", "id": "ARBA00053979", "url": "https://www.uniprot.org/uniprotkb/ARBA00053979#function" }, { "database": "UniProtKB", "id": "A0A287BM58", "url": "https://www.uniprot.org/uniprotkb/A0A287BM58#function" }, { "database": "UniProtKB", "id": "A0A8W4FG53", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FG53#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BCK9", "url": "https://www.uniprot.org/uniprotkb/A0A287BCK9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MYEF2", "url": "https://www.uniprot.org/uniprotkb/A0A287BCK9", "locus": { "chromosome": "1", "start_pos": 123638236, "end_pos": 123600908, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004661", "url": "https://www.ensembl.org/id/ENSSSCG00000004661" } ] } } ], "crossref": [ { "id": "A0A287BCK9", "url": "https://alphafold.ebi.ac.uk/entry/A0A287BCK9", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000004661", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004661", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd12658", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd12658", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd12660", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd12660", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd12662", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd12662", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100153072", "url": "https://www.ncbi.nlm.nih.gov/gene/100153072", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000504", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000504", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012677", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012677", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR034630", "url": "https://www.ebi.ac.uk/interpro/entry/IPR034630", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR034631", "url": "https://www.ebi.ac.uk/interpro/entry/IPR034631", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035979", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035979", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050374", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050374", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100153072", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100153072", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287BCK9", "url": "https://www.orthodb.org/?gene=A0A287BCK9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A287BM58", "url": "https://www.orthodb.org/?gene=A0A287BM58", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23003", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23003", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23003:SF15", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23003:SF15", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00076", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00076", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005654507", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005654507", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287ALM9", "url": "https://www.uniprot.org/uniprotkb/A0A287ALM9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ALM9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ALM9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BCK9", "url": "https://www.uniprot.org/uniprotkb/A0A287BCK9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BCK9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCK9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BEB3", "url": "https://www.uniprot.org/uniprotkb/A0A287BEB3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BEB3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BEB3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BM58", "url": "https://www.uniprot.org/uniprotkb/A0A287BM58", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BM58-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BM58-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FG53", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FG53", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FG53-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FG53-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SN63", "url": "https://www.uniprot.org/uniprotkb/F1SN63", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SN63-1", "url": "https://www.uniprot.org/uniprotkb/F1SN63-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MADADKPEALRAAGDDSSHQQPTESPGQLRREPHPPEQEKQPPQHSSSSNGVKMENDEPVKEEKSELKEKSMGNKKANRFHPYSKDKNSGTGEKKGPNRNRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPLNIKEDPDGENARRALQRTGGSFPGGHVPDMGSGLMNLPPSILNNPNIPPEVITNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKMDDKSVPHEDYRSHDSKTPQLPRGLGGIGMGLGPGGQPISASQLNIGGVMGNLGPSGMGVDGPGFGGMNRIGGGIGFGGLEAMNSMGGFGGVGRMGELYRGAMTSSMERDFGRGDIGINRGFGDSFGRIGGGMGGMNSVTGGMGMGLDRMSSSFDRMGPGIGAILERSIDMDRGFLSGPMGSGMRERIGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGKSKGCGTVRFDSPESAEKACRIMNGIKISGREIDVRLDRNA", "length": 576, "header": "tr|A0A287BCK9-1|A0A287BCK9_PIG Isoform 1 of Myelin expression factor 2 OS=Sus scrofa OX=9823 GN=MYEF2 PE=1 SV=2 CANONICAL=A0A287BCK9-1" }, "isoforms": [ { "isoform_ac": "A0A287ALM9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ALM9/entry", "sequence": { "sequence": "MEVLSTPEVFFLFLIHRENDEPVKEEKSELKEKSMGNKKANRFHPYSKDKNSGTGEKKGPNRNRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRVSAVDEEFVKKALETMNKYDLSGRPLNIKEDPDGENARRALQRTGGSFPGGHVPDMGSGLMNLPPSILNNPNIPPEVITNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKMDDKSVPHEDYRSHDSKTPQLPRGLGGIGMGLGPGGQPISASQLNIGGVMGNLGPSELYRGAMTSSMERDFGRGDIGINRGFGDSFGRIGGGMGGMNSVTGGMGMGLDRMSSSFDRMGPGIGAILERSIDMDRGFLSGPMGSGMRERIGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGKSKGCGTVRFDSPESAEKACRIMNGIKISGREIDVRLDRNA", "length": 495, "header": "tr|A0A287ALM9-1|A0A287BCK9_PIG Computationally mapped isoform of Myelin expression factor 2 OS=Sus scrofa OX=9823 GN=MYEF2 PE=1 SV=3 CANONICAL=A0A287BCK9-1" }, "locus": { "chromosome": "1", "start_pos": 123634561, "end_pos": 123606532, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040099.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040099.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000044904.3", "url": "https://www.ensembl.org/id/ENSSSCP00000044904.3" } ] } }, { "isoform_ac": "A0A287BCK9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCK9/entry", "sequence": { "sequence": "MADADKPEALRAAGDDSSHQQPTESPGQLRREPHPPEQEKQPPQHSSSSNGVKMENDEPVKEEKSELKEKSMGNKKANRFHPYSKDKNSGTGEKKGPNRNRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPLNIKEDPDGENARRALQRTGGSFPGGHVPDMGSGLMNLPPSILNNPNIPPEVITNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKMDDKSVPHEDYRSHDSKTPQLPRGLGGIGMGLGPGGQPISASQLNIGGVMGNLGPSGMGVDGPGFGGMNRIGGGIGFGGLEAMNSMGGFGGVGRMGELYRGAMTSSMERDFGRGDIGINRGFGDSFGRIGGGMGGMNSVTGGMGMGLDRMSSSFDRMGPGIGAILERSIDMDRGFLSGPMGSGMRERIGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGKSKGCGTVRFDSPESAEKACRIMNGIKISGREIDVRLDRNA", "length": 576, "header": "tr|A0A287BCK9-1|A0A287BCK9_PIG Isoform 1 of Myelin expression factor 2 OS=Sus scrofa OX=9823 GN=MYEF2 PE=1 SV=2 CANONICAL=A0A287BCK9-1" }, "locus": { "chromosome": "1", "start_pos": 123634561, "end_pos": 123600974, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040489.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040489.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053856.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053856.2" } ] } }, { "isoform_ac": "A0A287BEB3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BEB3/entry", "sequence": { "sequence": "MGNKKANRFHPYSKDKNSGTGEKKGPNRNRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRVSAVDEEFVKKALETMNKYDLSGRPLNIKEDPDGENARRALQRTGGSFPGGHVPDMGSGLMNLPPSILNNPNIPPEVITNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKMDDKSVPHEDYRSHDSKTPQLPRGLGGIGMGLGPGGQPISASQLNIGGVMGNLGPSELYRGAMTSSMERDFGRGDIGINRGFGDSFGRIGGGMGGMNSVTGGMGMGLDRMSSSFDRMGPGIGAILERSIDMDRGFLSGPMGSGMRERIGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGKSKGCGTVRFDSPESAEKACRIMNGIKISGREIDVRLDRNA", "length": 461, "header": "tr|A0A287BEB3-1|A0A287BEB3_PIG Computationally mapped isoform of Myelin expression factor 2 OS=Sus scrofa OX=9823 GN=MYEF2 PE=1 SV=2 CANONICAL=A0A287BCK9-1" }, "locus": { "chromosome": "1", "start_pos": 123634561, "end_pos": 123607390, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038900.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038900.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054868.2", "url": "https://www.ensembl.org/id/ENSSSCP00000054868.2" } ] } }, { "isoform_ac": "A0A287BM58-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BM58/entry", "sequence": { "sequence": "MADADKPEALRAAGDDSSHQQPTESPGQLRREPHPPEQEKQPPQHSSSSNGVKMENDEPVKEEKSELKEKSMGNKKANRFHPYSKDKNSGTGEKKGPNRNRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPLNIKEDPDGENARRALQRTGGSFPGGHVPDMGSGLMNLPPSILNNPNIPPEVITNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKMDDKSVPHEDYRSHDSKTPQLPRGLGGIGMGLGPGGQPISASQLNIGGVMGNLGPSGMGVDGPGFGGMNRIGGGIGFGGLEAMNSMGGFGGVGRMGELYRGAMTSSMERDFGRGDIGINRGFGDSFGRIGSAMIGGFAGRIGASNMGPVGSGISGGMGGMNSVTGGMGMGLDRMSSSFDRMGPGIGAILERSIDMDRGFLSGPMGSGMRERIGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGKSKGCGTVRFDSPESAEKACRIMNGIKISGREIDVRLDRNA", "length": 600, "header": "tr|A0A287BM58-1|A0A287BM58_PIG Computationally mapped isoform of Myelin expression factor 2 OS=Sus scrofa OX=9823 GN=MYEF2 PE=1 SV=3 CANONICAL=A0A287BCK9-1" }, "locus": { "chromosome": "1", "start_pos": 123634561, "end_pos": 123600974, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065720.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065720.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057149.3", "url": "https://www.ensembl.org/id/ENSSSCP00000057149.3" } ] } }, { "isoform_ac": "A0A8W4FG53-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FG53/entry", "sequence": { "sequence": "MADADKPEALRAAGDDSSHQQPTESPGQLRREPHPPEQEKQPPQHSSSSNGVKMENDEPVKEEKSELKEKSMGNKKANRFHPYSKDKNSGTGEKKGPNRNRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRVSAVGNNLVVEFKDEEFVKKALETMNKYDLSGRPLNIKEDPDGENARRALQRTGGSFPGGHVPDMGSGLMNLPPSILNNPNIPPEVITNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKMDDKSVPHEDYRSHDSKTPQLPRGLGGIGMGLGPGGQPISASQLNIGGVMGNLGPSELYRGAMTSSMERDFGRGDIGINRGFGDSFGRIGGGMGGMNSVTGGMGMGLDRMSSSFDRMGPGIGAILERSIDMDRGFLSGPMGSGMRERIGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGKSKGCGTVRFDSPESAEKACRIMNGIKISGREIDVRLDRNA", "length": 541, "header": "tr|A0A8W4FG53-1|A0A287BCK9_PIG Computationally mapped isoform of Myelin expression factor 2 OS=Sus scrofa OX=9823 GN=MYEF2 PE=1 SV=1 CANONICAL=A0A287BCK9-1" }, "locus": { "chromosome": "1", "start_pos": 123634561, "end_pos": 123600974, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000104577.1", "url": "https://www.ensembl.org/id/ENSSSCT00000104577.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078409.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078409.1" } ] } }, { "isoform_ac": "F1SN63-1", "url": "https://www.uniprot.org/uniprotkb/F1SN63/entry", "sequence": { "sequence": "MECKSTPEVFFLFLIHRENDEPVKEEKSELKEKSMGNKKANRFHPYSKDKNSGTGEKKGPNRNRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRVSAVDEEFVKKALETMNKYDLSGRPLNIKEDPDGENARRALQRTGGSFPGGHVPDMGSGLMNLPPSILNNPNIPPEVITNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKMDDKSVPHEDYRSHDSKTPQLPRGLGGIGMGLGPGGQPISASQLNIGGVMGNLGPSELYRGAMTSSMERDFGRGDIGINRGFGDSFGRIGSAMIGGFAGRIGASNMGPVGSGISGGMGGMNSVTGGMGMGLDRMSSSFDRMGPGIGAILERSIDMDRGFLSGPMGSGMRERIGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGKSKGCGTVRFDSPESAEKACRIMNGIKISGREIDVRLDRNA", "length": 519, "header": "tr|F1SN63-1|A0A287BCK9_PIG Computationally mapped isoform of Myelin expression factor 2 OS=Sus scrofa OX=9823 GN=MYEF2 PE=1 SV=5 CANONICAL=A0A287BCK9-1" }, "locus": { "chromosome": "1", "start_pos": 123634561, "end_pos": 123606600, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005147.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005147.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005021.5", "url": "https://www.ensembl.org/id/ENSSSCP00000005021.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SN63", "url": "https://www.uniprot.org/uniprotkb/F1SN63" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100153072", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100153072", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCK9", "url": "https://www.uniprot.org/uniprotkb/A0A287BCK9" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCK9", "url": "https://www.uniprot.org/uniprotkb/A0A287BCK9" } ], "pmid": "" }, { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCK9", "url": "https://www.uniprot.org/uniprotkb/A0A287BCK9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCK9", "url": "https://www.uniprot.org/uniprotkb/A0A287BCK9" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCK9", "url": "https://www.uniprot.org/uniprotkb/A0A287BCK9" } ], "pmid": "" }, { "name": "ribonucleoprotein complex", "id": "GO:1990904", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990904", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCK9", "url": "https://www.uniprot.org/uniprotkb/A0A287BCK9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": 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"monoisotopic_mass": 49854.0 }, "refseq": { "ac": "XP_005655024", "name": "5-phosphohydroxy-L-lysine phospho-lyase isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005655024" }, "gene_names": [ { "name": "PHYKPL", "type": "recommended", "evidence": [ { "id": "A0A287BCJ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BCJ7" } ] }, { "name": "PHYKPL", "type": "synonym", "evidence": [ { "id": "XP_005655024", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005655024" } ] } ], "protein_names": [ { "name": "5-phosphohydroxy-L-lysine phospho-lyase isoform X2", "type": "synonym", "evidence": [ { "id": "XP_005655024", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005655024" } ] }, { "name": "5-phosphohydroxy-L-lysine phospho-lyase", "type": "synonym", "evidence": [ { "id": "A0A287BCJ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BCJ7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BCJ7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCJ7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PHYKPL", "url": "https://www.uniprot.org/uniprotkb/A0A287BCJ7", "locus": { "chromosome": "2", "start_pos": 80191957, "end_pos": 80142033, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000014030", "url": "https://www.ensembl.org/id/ENSSSCG00000014030" } ] } } ], "crossref": [ { "id": "ENSSSCG00000014030", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000014030", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00610", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00610", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100521952", "url": "https://www.ncbi.nlm.nih.gov/gene/100521952", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR005814", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005814", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015421", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015421", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015422", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015422", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015424", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015424", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049704", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049704", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100521952", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521952", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "REGLNQH", "url": "https://omabrowser.org/oma/group/REGLNQH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287BCJ7", "url": "https://www.orthodb.org/?gene=A0A287BCJ7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR45688", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45688", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45688:SF6", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45688:SF6", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00202", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00202", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-1442490", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1442490", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-71064", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-71064", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_005655024", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005655024", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AMK6", "url": "https://www.uniprot.org/uniprotkb/A0A287AMK6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AMK6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AMK6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ATW9", "url": "https://www.uniprot.org/uniprotkb/A0A287ATW9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ATW9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ATW9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BCJ7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCJ7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BCJ7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCJ7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAADPREKAATLALRRRLLSNSCKLFFPEDPIKIVRGQGQYMYDEEGAEYIDCINNVAHVGHCHPLVVQAAHEQNQVLNTNSRYLHDNIVDYAQRLSETLPEKLCVFYFLNSGSEANDLALRLARQYTGHWDVVVLDHAYHGHLSSLIDISPYKFRDLDGQKEWVHVAPLPDTYRGLYREDHPNPAVAYASEVKRVVSSAQEKGRKIAAFFAESLPSVGGQIVPPAGFFPEVAEHIHKAGGVFVADEIQVGFGRVGKHFWAFQLQGEDFVPDIVTMGKSIGNGHPVACVATTQAVARAFEATGVEYFNTFGGSPVSCAVGLAVLDVLEKEQLQAHAACVGSFLMELLRQQKAKHPILGDIRGVGLFIGVDLIKDEATRMPATEEADYVVSRLKENYILLSTDGPGRNVLKFKPPMCFSLDNARHVVAKLDTILTDMEEKVRSCKTLRRVL", "length": 450, "header": "tr|A0A287BCJ7-1|A0A287BCJ7_PIG Isoform 1 of 5-phosphohydroxy-L-lysine phospho-lyase OS=Sus scrofa OX=9823 GN=PHYKPL PE=3 SV=2 CANONICAL=A0A287BCJ7-1" }, "isoforms": [ { "isoform_ac": "A0A287AMK6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AMK6/entry", "sequence": { "sequence": "MAADPREKAATLALRRRLLSNSCKLFFPEDPIKIVRGQGQYMYDEEGAEYIDCINNVAHVGHCHPLVVQAAHEQNQVLNTNSRYLHDNIVDYAQRLSETLPEKLCVFYFLNSGRNSSSKKGSS", "length": 123, "header": "tr|A0A287AMK6-1|A0A287BCJ7_PIG Computationally mapped isoform of 5-phosphohydroxy-L-lysine phospho-lyase OS=Sus scrofa OX=9823 GN=PHYKPL PE=3 SV=1 CANONICAL=A0A287BCJ7-1" }, "locus": { "chromosome": "2", "start_pos": 80146996, "end_pos": 80142323, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052072.2", "url": "https://www.ensembl.org/id/ENSSSCT00000052072.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045118.2", "url": "https://www.ensembl.org/id/ENSSSCP00000045118.2" } ] } }, { "isoform_ac": "A0A287ATW9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ATW9/entry", "sequence": { "sequence": "MAADPREKAATLALRRRLLSNSCKLFFPEDPIKIVRGQGQYMYDEEGAEYIDCINNVAHVGHCHPLVVQAAHEQNQVLNTNSRYLHDNIVDYAQRLSETLPEKLCVFYFLNSGSEANDLALRLARQYTGHWDVVVLDHAYHGHLSSLIDISPYKFRDLDGQKEWVHVAPLPDTYRGLYREDHPNPAVAYASEVKRVVSSAQEKGRKIAAFFAESLPSVGGQIVPPAGFFPEVAEHIHKAGGVFVADEIQVGFGRVGKHFWAFQLQGEDFVPDIVTMGKSIGNGHPVACVATTQAVARAFEATGVEYFNTFGGSPVSCAVGLAVLDVLEKEQLQAHAACVGSFLMELLRQQKAKHPILGDIRGVGLFIGVDLIKDEATRMPATEEADYVVSRSRMPKGSSISRATLGTVAEPDSPFLEEQVFRQTGPPAPPLASSSCLVVPFYCHCSLLPSPHILENPSKGLMCVLIQIVECASFCFEFT", "length": 479, "header": "tr|A0A287ATW9-1|A0A287BCJ7_PIG Computationally mapped isoform of 5-phosphohydroxy-L-lysine phospho-lyase OS=Sus scrofa OX=9823 GN=PHYKPL PE=3 SV=1 CANONICAL=A0A287BCJ7-1" }, "locus": { "chromosome": "2", "start_pos": 80183839, "end_pos": 80142323, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043206.3", "url": "https://www.ensembl.org/id/ENSSSCT00000043206.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047547.1", "url": "https://www.ensembl.org/id/ENSSSCP00000047547.1" } ] } }, { "isoform_ac": "A0A287BCJ7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCJ7/entry", "sequence": { "sequence": "MAADPREKAATLALRRRLLSNSCKLFFPEDPIKIVRGQGQYMYDEEGAEYIDCINNVAHVGHCHPLVVQAAHEQNQVLNTNSRYLHDNIVDYAQRLSETLPEKLCVFYFLNSGSEANDLALRLARQYTGHWDVVVLDHAYHGHLSSLIDISPYKFRDLDGQKEWVHVAPLPDTYRGLYREDHPNPAVAYASEVKRVVSSAQEKGRKIAAFFAESLPSVGGQIVPPAGFFPEVAEHIHKAGGVFVADEIQVGFGRVGKHFWAFQLQGEDFVPDIVTMGKSIGNGHPVACVATTQAVARAFEATGVEYFNTFGGSPVSCAVGLAVLDVLEKEQLQAHAACVGSFLMELLRQQKAKHPILGDIRGVGLFIGVDLIKDEATRMPATEEADYVVSRLKENYILLSTDGPGRNVLKFKPPMCFSLDNARHVVAKLDTILTDMEEKVRSCKTLRRVL", "length": 450, "header": "tr|A0A287BCJ7-1|A0A287BCJ7_PIG Isoform 1 of 5-phosphohydroxy-L-lysine phospho-lyase OS=Sus scrofa OX=9823 GN=PHYKPL PE=3 SV=2 CANONICAL=A0A287BCJ7-1" }, "locus": { "chromosome": "2", "start_pos": 80186273, "end_pos": 80142323, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041254.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041254.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035931.1", "url": "https://www.ensembl.org/id/ENSSSCP00000035931.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287AMK6", "url": "https://www.uniprot.org/uniprotkb/A0A287AMK6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100521952", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521952", "resource": "KEGG Pathway" }, { "id": "R-SSC-1442490", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1442490", "resource": "Reactome", "description": "Collagen degradation" }, { "id": "R-SSC-71064", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-71064", "resource": "Reactome", "description": "Lysine catabolism" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8J8XD81-1", "protein_name": "5-phosphohydroxy-L-lysine phospho-lyase", "gene_name": "Phykpl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAADRRAKAATLDLRRRLLSSSCRLFFPENPVKIIRGQGQYLYDEQGREYLDCINNVAHVGHCHPTVVQAAHEQNLVLNTNSRYLHDNIVDYAQRLSETLPEKLSVFYFLNSGSEANDLALRLARQYTGHQDVVVLDHAYHGHLSSLIDISPYKFRNLDGQKEWVHVAPLPDTYRGPYREDHPDPAGAYASEVKHVISSAQKKGRKIAAFFAESLPSVSGQIIPPAGYFSQVAEHIRRAGGLFVADEIQVGFGRVGKHFWAFQLEGEDFVPDIVTMGKSIGNGHPVACLATTQAVSRAFEATGVEYFNTFGGNPVSCAVGLAVLDVLKTEQLQAHATNVGSFLMEHLSQQKAKHPIIGDVRGTGLFIGVDLIKDETLRTPATEEAEYLVSRLKENYILLSTDGPGRNILKFKPPMCFSLDNAQHVVAKLDDILTDMEEKVRSCETLRIKHPPGSTGPGCRAAAGSRPSNLEQGNLVIKSAP", "length": 481 }, "evidence": [ { "id": "A0A287BCJ7", "url": "https://omabrowser.org/oma/group/A0A287BCJ7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0YK70-1", "protein_name": "5-phosphohydroxy-L-lysine phospho-lyase", "gene_name": "PHYKPL", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MRRAQRSRQETLTLRRQLIGSSCKLFYPNDPLKIVKARGQYMYDENGRQYLDCINNVAHVGHCHPDVVKAAHEQNQLLNTNSRYLHDNLTDYAERLSEKLPEKLCTFYFLNSGSEANDLALRMARQFTKHEDVIVLDHAYHGHLTSLIDISPYKFRNLEGQKEWVHVAPVPDTYRGLYREDHEDPATAYATEVKNIIERAHKKGREIAAFFAESLPSVGGQIIPPEGYFQKVAEHVHKAGGVFVADEIQVGFGRVGKHFWAFQLQGEEFIPDIVTMGKPIGNGHPIACVATTKEIAEAFAATGVEYFNTFGGNPVSCAIGLAVLDVIEKEQLQIHATEVGNFLMKLLTEQKVKHPIIGDVRGSGLFIGVDLIKDQAKRTPATEEAEYLITRLKEEYILLSTDGPGRNVLKFKPPMCFTMEDAKFVVDTIDKLLTDMEKEHMNQEKTSTGST", "length": 451 }, "evidence": [ { "id": "A0A287BCJ7", "url": "https://omabrowser.org/oma/group/A0A287BCJ7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E1B8R9-1", "protein_name": "5-phosphohydroxy-L-lysine phospho-lyase", "gene_name": "PHYKPL", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAADQRGKAATLALRRRLLSNSCRLFFPEDPIKIVRGQGQYMYDEQGAEYIDCINNVAHVGHCHPLVVQAAHEQNQVLNTNSRYLHDNIVDYAQRLSETLPEKLCVFYFLNSGSEANDLALRLARQYTGHWDVVVLDHAYHGHLSSLIDISPYKFRDLDGQKEWVHVAPLPDTYRGPYREDHPNPAVAYASEVKRVVSSAQEKGRKIAAFFAESLPSVGGQIIPPAGYFPEVAGHIRRAGGVFVADEIQVGFGRVGKHFWAFQLQGEDFVPDIVTMGKSIGNGHPVACVATTQAVARAFEATGVEYFNTFGGSPVSCAVGLAVLDVLEKEQLQAHAACVGSFLMELLGQQKAKHPILGDIRGVGLFIGVDLIKDEATRMPATEEADYVVSRLKENYILLSTDGPGRNVLKFKPPMCFSLDNARHVVAKLDAILTDMEAKVRSCETLRLHS", "length": 450 }, "evidence": [ { "id": "A0A287BCJ7", "url": "https://omabrowser.org/oma/group/A0A287BCJ7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q1ZXC3-1", "protein_name": "Aminotransferase class-III", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MITRGVIKNIKTTSVLINNSIKSTQCSFSSKVNYDEIYKKHLKISEKKFNKKEIIQTIKDNTLFSWNPTEAAANKALIMEKGEGVYFYDTDGKKYIDFNSQAMCSNLGHTVPEEVIKAIEEQLRSAAYAYPCSIVTPIKAKLSMLLADLFPGDINHFYYTSGGAESNETAMRMARLFTGRHKILARYRSYHGATLGAMTLTGDPRRWNSEPGASGVVHFMDPYPYSFKWGETEEQITEISLKYLRETISYEGAKNIAAIFIEPVTGTNGILKPPKGYLEGIRKICDETGILMVCDEVMNGFGRTGEMFGFMNSQEEVIPDIVTMAKGINGAYLPLGAVGCRDRIADHFKVNPIGIGSTYNSHPVTLASAYAALQYFLKNRVLDNVKTLEPVMKKHMEQLKQRHPTVKGYRSLGLFGIVELQKNSNGDPFIEYNGPPHPAMTKLSSDFVENGLYTLCRWSSFFTNPPLTINEKELKEGFEILDKSLTNLDKHFEK", "length": 494 }, "evidence": [ { "id": "A0A287BCJ7", "url": "https://omabrowser.org/oma/group/A0A287BCJ7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8IUZ5-1", "protein_name": "5-phosphohydroxy-L-lysine phospho-lyase", "gene_name": "PHYKPL", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAADQRPKADTLALRQRLISSSCRLFFPEDPVKIVRAQGQYMYDEQGAEYIDCISNVAHVGHCHPLVVQAAHEQNQVLNTNSRYLHDNIVDYAQRLSETLPEQLCVFYFLNSGSEANDLALRLARHYTGHQDVVVLDHAYHGHLSSLIDISPYKFRNLDGQKEWVHVAPLPDTYRGPYREDHPNPAMAYANEVKRVVSSAQEKGRKIAAFFAESLPSVGGQIIPPAGYFSQVAEHIRKAGGVFVADEIQVGFGRVGKHFWAFQLQGKDFVPDIVTMGKSIGNGHPVACVAATQPVARAFEATGVEYFNTFGGSPVSCAVGLAVLNVLEKEQLQDHATSVGSFLMQLLGQQKIKHPIVGDVRGVGLFIGVDLIKDEATRTPATEEAAYLVSRLKENYVLLSTDGPGRNILKFKPPMCFSLDNARQVVAKLDAILTDMEEKVRSCETLRLQP", "length": 450 }, "evidence": [ { "id": "A0A287BCJ7", "url": "https://omabrowser.org/oma/group/A0A287BCJ7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8R1K4-1", "protein_name": "5-phosphohydroxy-L-lysine phospho-lyase", "gene_name": "Phykpl", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAADTRAKAVTLDLRRRLLSSSCRLFFPEDPVKIIRGQGQYLYDEQGREYLDCINNVAHVGHCHPTVVQAAHEQNLVLNTNSRYLHDNIVDYAQRLSETLPEQLSVFYFLNSGSEANDLALRLARQYTGHQDVVVLDHAYHGHLSSLIDISPYKFRNLGGQKEWVHVAPLPDTYRGPYREDHPNPAEAYANEVKHVISSAQQKGRKIAAFFAESLPSVSGQIIPPAGYFSQVAEHIHRAGGLFVADEIQVGFGRIGKHFWAFQLEGEDFVPDIVTMGKSIGNGHPVACMATTQAVSRAFEATGVEYFNTFGGNPVSCAVGLAVLDVLKTEQLQAHATNVGSFLLEHLTQQKAKHPIIGDVRGTGLFIGVDLIKDETLRTPATEEAEYLVSRLKENYILLSIDGPGKNILKFKPPMCFNVDNAQHVVAKLDDILTDMEEKVRSCETLRIKHPPEDTHPTQILLTRQQD", "length": 467 }, "evidence": [ { "id": "A0A287BCJ7", "url": "https://omabrowser.org/oma/group/A0A287BCJ7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "pyridoxal phosphate binding", "id": "GO:0030170", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030170", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCJ7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCJ7" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCJ7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCJ7" } ], "pmid": "" }, { "name": "lyase activity", "id": "GO:0016829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016829", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCJ7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCJ7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B5G8-1", "uniprot_ac": "A0A287B5G8", "uniprot_id": "A0A287B5G8_PIG", "mass": { "chemical_mass": 772713.0, "monoisotopic_mass": 772713.0 }, "refseq": {}, "gene_names": [ { "name": "NEB", "type": "recommended", "evidence": [ { "id": "A0A287B5G8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B5G8" } ] } ], "protein_names": [ { "name": "Nebulin", "type": "synonym", "evidence": [ { "id": "A0A287B5G8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B5G8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B5G8", "url": "https://www.uniprot.org/uniprotkb/A0A287B5G8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NEB", "url": "https://www.uniprot.org/uniprotkb/A0A287B5G8", "locus": { "chromosome": "15", "start_pos": 766125, "end_pos": 546173, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016397", "url": "https://www.ensembl.org/id/ENSSSCG00000016397" } ] } } ], "crossref": [ { "id": "ENSSSCG00000016397", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016397", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd11933", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd11933", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000900", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000900", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013998", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013998", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035629", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035629", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036028", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036028", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055297", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055297", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR11039", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11039", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11039:SF37", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11039:SF37", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00880", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00880", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14604", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14604", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-390522", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-390522", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287ARH5", "url": "https://www.uniprot.org/uniprotkb/A0A287ARH5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ARH5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ARH5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AYJ9", "url": "https://www.uniprot.org/uniprotkb/A0A287AYJ9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AYJ9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AYJ9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AZK6", "url": "https://www.uniprot.org/uniprotkb/A0A287AZK6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AZK6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AZK6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B5G8", "url": "https://www.uniprot.org/uniprotkb/A0A287B5G8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B5G8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B5G8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9W0", "url": "https://www.uniprot.org/uniprotkb/A0A287B9W0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9W0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9W0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BBK6", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BBK6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BN18", "url": "https://www.uniprot.org/uniprotkb/A0A287BN18", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BN18-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BN18-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BPU2", "url": "https://www.uniprot.org/uniprotkb/A0A287BPU2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BPU2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BPU2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SHX0", "url": "https://www.uniprot.org/uniprotkb/F1SHX0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SHX0-1", "url": "https://www.uniprot.org/uniprotkb/F1SHX0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MADDEEYEEVVEYYTEETVYEEVPGETITEVYETTTTRTSGYEQSDTSQPAVAQPMPSKPVERKKVIRKKVDPSKFMTPYIAHSQKMQDLFSTNKYKKNYEKAKGKPYAITTDTPELRRIKKVQDQLSEVKYRIDGDVAKTICHVDEKAKDIEHAKKVSQQVSKVLYKQNWEDTKDKYLLPPDAPELVQAIKNTAMFSKKLYTEDWEADKSLFYPYNDSPELRRVAQAQKALSDIAYKKGHAEQQTQFTSLPDPPDIEFAKKVTNQVSKQKYKEDYENKIKGKWSETPCFEIATARMNAKNISTRKYQEDFENMKDQIYFMQTETPEYKVNKQAGTAASKVKYKEDYEKNKGKADYNVLPASENPLLRHLKAAGDALSDKRYKENYEKTKAKSINYCETPKFKLDTVLHNFSSDTKYKDSYLKNILGHYVGSFEDPYHTHCMKVAAENSDKNYKAEYEEDRGKGFFPQTITQEYEAIKKLDQCKDHTYKVHPDKTKFTQVTDSPVLVQAQVNSKQLSDLNYKAKHENEKFKCHIPPDTPAFIQHKVNAYNLSDNVYKHDWEKTKAKKFDIKVDAIPLLAAKANTKNTSDVMYKKDYEKSKGKMIGALSINDDPKMLHSLKTAKNQSDRLYKENYEKTKAKSMNYCETPKYQLDTLLKNFSEAKYKDSYVQNVLGHYIGSFEDPYQLHCMKVSAQNSDKNYKAEYEEDKGKCYFPQTITQEYEAIKKLDQCKDHTYKVHPDKTKFTAVTDTPVLLQAQLNTKQLSDLNYKAKHEGEKFKCNIPADAPQFIQHRVNAYNLSDNVYKHDWEKTKAKKFDIKVDAIPLLAAKANTKNTSDVMYKKDYEKSKGKMIGALSINDDPKMLHSLKTAKNQSDREYRKDYEKSKTIYTAPLDMLQVTQAKKSQAIASDVDYKHLLHNYSYPPDSINVDLAKKAYALQSDVEYKADYNSWMKGCGWIPFGSLEMEKAKRASDILNEKKYRQHPETLKFTSIEDAPIIVQSKINQAQRSDIAYKAKGEEIIHKYSLPADLPFIQAKVNAYNISESMYKADLKDLSKKGYDLRTDAIPIKAAKAARQAASDVQYKKDYEKAKGKMVGFQSLQDDPKLVHYMNVAKIQSDREYKKDYEKTKTKYNTPHDMFNVVAAKKAQDVASNVNYRHSLHHYTYLPDAMDLELSKNMMHIQSDNAYKEDYNTWMKGIGWIPLGSLEVEKVKKAGDALNEKKYRQHPDTLKFTSIVDSPVMVQAKQNTRQVSDILYKAKGEDVKHKYTMGPDLPQFLQAKCNAYNISDVCYKRDWHDLIAKGNNVLGDAIPITAAKASRNIASDYKYKEAYEKAKGKHVGFRSLQDDPKLVHYMNVAKLQSDREYKKNYENTKTSYHTPGDMVSITAAKMAQDVATNVNYKQPIHHYTYLPDALSLEHTRNVNQIQSDNVYKDEYNHFFKGIGWIPLGSLEVEKVKKAGDALNERKYRQHPDTIKFTSVPDSMGMVLAQHNTKQLSDLNYKVEGEKLKHKYTMDPDVPQFIQAKVNAINMSDAHYKADWKKTLAKGYDLTPDAIPIVAAKSSRNIASDFKYKEAYEKAKGKQVGFRSLQDDPKLVHYMNVAKIQSDREYKKGYEASKTRYHTPLDMLSVTAAKKSQEVATNTNYKQPFHHYTLLPDALNVEHSRNAMQIQSDNLYKSDFTNWMKGIGWIPMESLEVEKAKKAGEILSEKKYRQHPEKLKFTYAMDTMEQALNKSNKLIMDKRLYTEKWNKDKTTIHVMPDTPDILLSRVNQITLSDKLYKAGWEEEKKKGYDLRPDAISIKAARASRDIASDYKYKQAYEQAKGKHIGFRSLEDDPKLVHFMQVAKMQSDREYKKAYEKSKTSFHTPVDMLSVVAAKKSQEVATNANYRNVIHTYNMLPDAMSFELAKNMMQLQSDNQYKADYADFMKGIGWLPLGSLEAEKNKKAMEIISEKKYRQHPDTLKYSTLMDSMNMVLAKNNAKIMNEHLYKQAWEADKTKVHIMPDIPQIILAKANAVNMSDKLYKLSLEESKKKGYDLRTDAISIQAAKASRDIASDYKYKHSYEKERGKMVGFRSLEDDPKLVHSMQVAKMQSDREYKKSYEKTKTSYHTPADMLSVTAARDAQANITNTNYKHLIHKYILLPDAMNIQLSKNMNHIQSDNEYKQDYNECYKGLGWSPAGSLEVEKAKKATEYASDQKYRQHPSNFQFQKLNDSMDMVLAKQNAHTMNKYLYTADWNKDKTKIHVMPDTPDILQAKQNQTLFSQKLYKLGWEEALKKGYDLPVDAISVQLAKVSRDNASDFKYKQGYRKQLGHHIGFRNLQDDPKLVLSMNVAKMQSEREYKKDFEKWKTKFTSPVDMLGVVLAKKCQALVSDVDYKNYLHQWTCLPDQNDVIQAKRSYELQSENLYKSDLEWLRGIGWSPLGSLEAEKNKRASEIISEKKYRQPPDRNKFTSIPDAMDIVLAKTNAKNRSDRLYREAWDKDKTQVHIMPDTPDIILAKANLINSSDKLYRMGYEELKKKGYDLPVDAIPIKAAKASREIASEYKYKEGFRKQLGHHVGARNIEDDPKMMWSMHVAKIQSDREYKKDFEKWKTKFSSPVDMLGVVLAKKCQTLVSDIDYKNYLHQWTCLPDQSDVIHARRAYDLQSDNLYKSDLQWLKGIGWLPSGSLEDEKNKRATQILSDHVYRQHPDKFKFSSLMDSIPMVLAKNNAITMNHRLYTEAWDKDKTTVHIMPDTPEVLLAKQNKINYSEKLYKLGLEEAKRKGYDMRLDAIPIRAAKASRDIASEFKYKEGYRKQLGHHIGARAIHDDPKMMWSMHVAKVQSDREYKKDFEKWKTKFSSPVDMLGVVLAKKCQTLVSDIDYKNYLHQWTCLPDQSDVIHARRAYDLQSDNMYKSDLQWLRGIGWVPIGSLDVEKCKRATEILSDKIYRQPPDTFKFTSVPDSLEQVLAKNNAVNMNKRLYTEAWDKDKTQVHIMPDTPEIMLARQNRLNYSETLYKLANEEAKKKGYDLRSDAIPIVAAKASRDIVSDYKYKDGYRKQLGHHIGARNIEDDPKMMWSMHVAKIQSDREYKKDFEKWKTKFSSPVDMLGLVQAKKCQILVSDVDYKNYLHQWTCLPDQNDVIHARQAYDLQSDNIYKSDLQWLKGIGWVPIGSVDVVKCKRAAEILSDHIYRQPPDKLKFTSVPDSLEQVLAKNNAINMNKRLYTEAWDKDKTQIHIMPDTPEIMLARQNKINYSESLYRQAMEEAKKEGYDLRSDAIPIVAAKASRDIASDYKYKEAYRKQLGHHIGARAVHDDPKMMWSLHVAKMQSDREYKKDFEKYKTRFSSPVDMLGIVLAKKCQTLVSDVDYKHPLHEWTCLPDQNDIIHARKAYDLQSDNLYKSDLEWMKGIGWIPLGSVEVVKAKRAGEILSDNIYRQRPDTLKFTSVTDSPELVLAKNNALNMNKRLYTEAWDNDKKTIHVMPDTPEIMLAKLNRINYSDKLYRLALEESKKEGCDLRVDAIPIQAAKASREIASDYKYKEAYRKQLGHHIGARNIEDDPKMMWSIHAAKIQSDREYKKDFEKWKTRFSSPVDMLGLVQAKKCQILVSDIDYKHPLHEWICLPDQNDIIQARKAYDLQSDAIYKADLEWLRGIGWVPLGSVEVEKVKRAGEILSERKYRQPADQLKFTCITDTPEIVLAKNNALTMSKHLYTEAWDTDKTSIHVMPDTPEILLAKSNSANISQKLYTKGWDESKMKDYDLKADAISIKSAKASRDIASDYKYKEAYEKQKGHHIGAQSVEDDPKIMCAIHAGKIQSEREYKKDFQKWKTKFTSPVDMLGILLAKKCQTLVSDIDYRNYLHHWTCLPDQNDIIQARKAYELQSDALYKADLEWLRGIGWMPQGSPEVLRVKNAQEILRDSVYRTPVVKLKYTSIVDTPEVVLAKSNAENISIPKYREVWDKDKTSVHIMPDTPEINLARANALNVSNKIYREGWDEMKMSCDVRLDAIPIQAAKASREIASDYKYKLDHEKQKGHYVGTLTARDDNKIRWALIAGKIQNEREYRLHWAKWKSKFQSPADMLSITHSKNCQALVSDIDYRNYLHQWTCLPDQHDVIQARKAYDLQSDAIYKADLEWLRGIGWMPSDSVSVNHAKHAADIFSEKKYRTKIETLNFTPVDDRVDYVTAKQSGEILNDIKYRKDWNDTKSKYTLTETPQLHAAQEAARILDQYLYKESWEKQKATGYILPPDAVPFVHAHHSSDVQSELKYKADHVKQKGHYVGVPTMRDDPKLVWFEHAGQIQNDRLYKEHYHKTKAKINIPPDMVSVVAAKEGQILVSDIDYRNYLHQWTCHPDQNDVIQARKAYDLQSDNVYKADLEWLRGIGWIPLDSVDHVRVTRNQEMVNQIKYKKDALANYPNFTSVVDPPAVVLAKINSVNQSDVKYKETFNKLLKGKYIFSPDTPYITHSKDMGKLYSTILYKGAWEGTKAYGYTLDERYIPIVGAKHADFVNSELKYKETYEKQKGHYLAGKEISEFPNVVHCLDFQKMRSVLNYRRHYEDTKANVHIPNDMMNHVLAKRCQYILSDLEYRHYFHQWTSLPEEPNVIRARNAQEILSDNVYKDDLNWLKGIGCYVWDTPQILHAKKSYDLQSQILYTADGKENLKNYNMVTDTPLYVTALQSGINASEVKYKENYHQIKDKYTTVLETVDYDRTRNLKDLYSSNVYKEAWDKVKATSYILPSNTVSLTHAKNQKHLASHIKYREEYEKFKALYTLPKSVDDDPNTARCLRVGKFNIDRLYRSVYEKNKMKIHMVPDMVEMVTAKDSQKKVSEIDYRLHLHEWICHPDLQVNSHVRKVTDQISDIVYKDDLNWLKGIGCYVWDTPEILHAKHAYDLRNDIKYQAHVKKTRNNYKLVTDTPLYVQAVKSGKQLSDAVYHYDYVHSVRGKVAPTTKTVDLDRALHAYKLQSENLYRKDGLNSLPTGYRLPGDTPHFKHNKDIRYMSSYFKYKEVYEHFKANGYTLGPKDVPFVHVRRVNNVTSERLYRQLYHKLKDKIHTTPDTPEIRQVKKTQEAVSELIYKSDFFKMQGHMISMPYTPHVLHCRYVGDITSDIKYKEDLQILRGLGCFLYDTPDMVRSRHLRKLWSNYLYTDNARKMRDKYKVVLDTPEYRKVQELKTHLSELVYRAAGKKQKSIFTSVPDTPDLLRAKRGQKLQSQYLYVELATKERPHHHAGNQTTALKHARDVKDMVSEKKYKVQYEKMKDKYTPVPDTPILIRAKKAYWNASDLRYKETFQKTKGKYHTVKDALDIVYHRKVTDHISKIKYKENYMSQLGIWRSIPDRPEHFHHRAVTDAVSDVKYKEDLTWLKGIGCYAYDTPDFTLAEKNKTLYSKYKYKEVFERTKSDFKYEADCPINRHFKFATQLMNEKKYRADYEQRKDKYQLVVDEPRHLLAKIAGDQISQIKYRKNYEKTKDKFTSVVDTPEHLRTTKVNKQISDILYKLEYNKAKPRGYTTIHDTPMLLHVRKVKDEVSDLKYKEVYQRTKSNCTIEPDAVHIKAAKDAYKVNTNLDYKKQYEANKAHWRWTPDRPDFIQAAKSSLQQSDFEYKLDREFLKGCKLSVTDDKDMVLALRNSVIESDLKYKEKHVKERGTCHAVPDTPQILLAKTVSNLVSENKYKRHVKKHLAQGSYTTLPETRDTVHVKEVTKHVSDTNYKKKFVKERGKSNYSIMLEPPEVKHAMEVAKKQSDVAYKKDAKENLHYTTVADRPDIKKATQAAKQASEVEYRAKHRKEGSHGLSMLGRPDIEMAKKAATLSSQVKYRENFNKEKGKTPKYNPKESQLYKIMKDANNLASEVKYKADLKKLHKPVTDMKESLIMNHVLNTSHLASSYQYKKNYEKSKGHYHTIPDNLEQLHLKEATELQSIVKYKEKYEKERGKPMLDFETPTYITAKESQQMQSGKEYRKDYEESIKGRNLTGLEVTPALLHVKYATKIASEKEYRKDLEESIRGKGLSEMEDTPDMLRAKNATQILNEKEYKRDLELEVKGRGLNAMANETPDFMRARNATDIASQIKYKQLAEMEKANFTSVVDTPEIIHAQQVKNLSSQKKYKEDAEKCMSYYETVLDTPEMQRVRENQKNFSLLQYQCDLKNSKGKITVVQDTPEILRVKENQKNFSSVLYKEDVSPGTAIGKTPEMMRVKQTQDHISSVKYKETIGQGTPIPDLPEVKRVKETQKHISSVMYKENLGTGIPTPVTPEIERVKRNQENFSSVLYKENLGKGTPTPITPEMERVKRNQENFSSVLYKENMGKGTPLPVTPEMERVKHNQENISSILYKENVGKGTPTPVTPEMQRVKRNQENISSVIYKENLGKATPTPFTPEMERVKRNQENFSSVLYKENMRKATPTPVTPEMERAKRNQENISSVLYSDSFRKQIQGKAAYVLDTPEMRRVRETQRHISTVKYHEDFEKHKGCFTPVVTDPITERVKKNTQDFSDINYRGIQRKVVEMEQKRNDQDQETITGLRVWRTNPGSVFDYDPAEDNIQSRSLHMLNAQAQRRSREQSRSASALSISGGEEKSEHSEAARLSTYSDGGVFFSATSAAYKHAKTTELPQQRSSSVATQQTTVSSIPSHPSTAGKIFRAMYDYMAADADEVSFRDGDAIVNVQAIDEGWMYGTVQRTGRTGMLPANYVEAI", "length": 6665, "header": "tr|A0A287B5G8-1|A0A287B5G8_PIG Isoform 1 of Nebulin OS=Sus scrofa OX=9823 GN=NEB PE=1 SV=2 CANONICAL=A0A287B5G8-1" }, "isoforms": [ { "isoform_ac": "A0A287ARH5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ARH5/entry", "sequence": { "sequence": "MRVKNAQKLLNERLYRIRPEALKFTSIVDTPEVILAKINSVQISEPLYRDAWDKEKANVNIPADTPLMLQSKINAMQISNKQYQQAWEDVKMTGYDLRADAIGIQHAKASRDIASDYLYKTAYEKQKGHYIGCRSAKEDPKLVWAANVMKMQNDRLYKKAYNDHKARITIPVDMVSINAAKEGQALASDVDYRQYLHQWSCFPDQNDVIQARKAYDLQSDALYKADLEWLRGIGWMPQGSPEVLRVKNAQEILRDSVYRTPVVKLKYTSIVDTPEVVLAKSNAENISIPKYREVWDKDKTSVHIMPDTPEINLARANALNVSNKIYREGWDEMKMSCDVRLDAIPIQAAKASREIASDYKYKLDHEKQKGHYVGTLTARDDNKIRWALIAGKIQNEREYRLHWAKWKSKFQSPADMLSITHSKNCQALVSDIDYRNYLHQWTCLPDQHDVIQARKAYDLQSDAIYKADLEWLRGIGWMPSDSVSVNHAKHAADIFSEPDVHFSKYPYLYKESWEKQKATGYILPPDAVPFVHAHHSSDVQSELKYKADHVKQKGHYVGVPTMRDDPKLVWFEHAGQIQNDRLYKEHYHKTKAKINIPPDMVSVVAAKEGQILVSDIDYRNYLHQWTCHPDQNDVIQARKAYDLQSDNVYKADLEWLRGIGWIPLDSVDHVRVTRNQEMVNQIKYKKDALANYPNFTSVVDPPAVVLAKINSVNQSDVKYKETFNKLLKGKYIFSPDTPYITHSKDMGKLYSTILYKGAWEGTKAYGYTLDERYIPIVGAKHADFVNSELKYKETYEKQKGHYLAGKEISEFPNVVHCLDFQKMRSVLNYRRHYEDTKANVHIPNDMMNHVLAKRCQYILSDLEYRHYFHQWTSLPEEPNVIRARNAQEILSDNVYKDDLNWLKGIGCYVWDTPQILHAKKSYDLQSQILYTADGKENLKNYNMVTDTPLYVTALQSGINASEVKYKENYHQIKDKYTTVLETVDYDRTRNLKDLYSSNVYKEAWDKVKATSYILPSNTVSLTHAKNQKHLASHIKYREEYEKFKALYTLPKSVDDDPNTARCLRVGKFNIDRLYRSVYEKNKMKIHMVPDMVEMVTAKDSQKKVSEIDYRLHLHEWICHPDLQVNSHVRKVTDQISDIVYKDDLNWLKGIGCYVWDTPEILHAKHAYDLRNDIKYQAHVKKTRNNYKLVTDTPLYVQAVKSGKQLSDAVYHYDYVHSVRGKVAPTTKTVDLDRALHAYKLQSENLYRKDGLNSLPTGYRLPGDTPHFKHNKDIRYMSSYFKYKEVYEHFKANGYTLGPKDVPFVHVRRVNNVTSERLYRQLYHKLKDKIHTTPDTPEIRQVKKTQEAVSELIYKSDFFKMQGHMISMPYTPHVLHCRYVGDITSDIKYKEDLQILRGLGCFLYDTPDMVRSRHLRKLWSNYLYTDNARKMRDKYKVVLDTPEYRKVQELKTHLSELVYRAAGKKQKSIFTSVPDTPDLLRAKRGQKLQSQYLYVELATKERPHHHAGNQTTALKHARDVKDMVSEKKYKVQYEKMKDKYTPVPDTPILIRAKKAYWNASDLRYKETFQKTKGKYHTVKDALDIVYHRKVTDHISKIKYKENYMSQLGIWRSIPDRPEHFHHRAVTDAVSDVKYKEDLTWLKGIGCYAYDTPDFTLAEKNKTLYSKYKYKEVFERTKSDFKYEADCPINRHFKFATQLMNEKKYRADYEQRKDKYQLVVDEPRHLLAKIAGDQISQIKYRKNYEKTKDKFTSVVDTPEHLRTTKVNKQISDILYKLEYNKAKPRGYTTIHDTPMLLHVRKVKDEVSDLKYKEVYQRTKSNCTIEPDAVHIKAAKDAYKVNTNLDYKKQYEANKAHWRWTPDRPDFIQAAKSSLQQSDFEYKLDREFLKGCKLSVTDDKDMVLALRNSVIESDLKYKEKHVKERGTCHAVPDTPQILLAKTVSNLVSENKYKRHVKKHLAQGSYTTLPETRDTVHVKEVTKHVSDTNYKKKFVKERGKSNYSIMLEPPEVKHAMEVAKKQSDVAYKKDAKENLHYTTVADRPDIKKATQAAKQASEVEYRAKHRKEGSHGLSMLGRPDIEMAKKAATLSSQVKYRENFNKEKGKTPKYNPKESQLYKIMKDANNLASEVKYKADLKKLHKPVTDMKESLIMNHVLNTSHLASSYQYKKNYEKSKGHYHTIPDNLEQLHLKEATELQSIVKYKEKYEKERGKPMLDFETPTYITAKESQQMQSGKEYRKDYEESIKGRNLTGLEVTPALLHVKYATKIASEKEYRKDLEESIRGKGLSEMEDTPDMLRAKNATQILNEKEYKRDLELEVKGRGLNAMANETPDFMRARNATDIASQIKYKQLAEMEKANFTSVVDTPEIIHAQQVKNLSSQKKYKEDAEKCMSYYETVLDTPEMQRVRENQKNFSLLQYQCDLKNSKGKITVVQDTPEILRVKENQKNFSSVLYKEDVSPGTAIGKTPEMMRVKQTQDHISSVKYKETIGQGTPIPDLPEVKRVKETQKHISSVMYKENLGTGIPTPVTPEIERVKRNQENFSSVLYKENLGKGIPIPMTPEMERVKHNQENFSSVLYSDSFRKQIQGKAAYVLDTPEMRRVRETQRHISTVKYHEDFEKHKGCFTPVVTDPITERVKKNTQDFSDINYRGIQRKVVEMEQKRNDQDQETITGLRVWRTNPGSVFDYDPAEDNIQSRSLHMLNAQAQRRSREQSRSASALSISGGEEKSEHSEAARLSTYSDGGVFFSATSAAYKHAKTTELPQQRSSSVATQQTTVSSIPSHPSTAGKIFRAMYDYMAADADEVSFRDGDAIVNVQAIDEGWMYGTVQRTGRTGMLPANYVEAI", "length": 2842, "header": "tr|A0A287ARH5-1|A0A287B5G8_PIG Computationally mapped isoform of Nebulin OS=Sus scrofa OX=9823 GN=NEB PE=1 SV=3 CANONICAL=A0A287B5G8-1" }, "locus": { "chromosome": "15", "start_pos": 765584, "end_pos": 671618, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037387.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037387.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046551.3", "url": "https://www.ensembl.org/id/ENSSSCP00000046551.3" } ] } }, { "isoform_ac": "A0A287AYJ9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AYJ9/entry", "sequence": { "sequence": "MLQSKINAMQISNKQYQQAWEDVKMTGYDLRADAIGIQHAKASRDIASDYLYKTAYEKQKGHYIGCRSAKEDPKLVWAANVMKMQNDRLYKKAYNDHKARITIPVDMVSINAAKEGQALASDVDYRQYLHQWSCFPDQNDVIQARKAYDLQSDALYKADLEWLRGIGWMPQGSPEVLRVKNAQEILRDSVYRTPVVKLKYTSIVDTPEVVLAKSNAENISIPKYREVWDKDKTSVHIMPDTPEINLARANALNVSNKIYREGWDEMKMSCDVRLDAIPIQAAKASREIASDYKYKLDHEKQKGHYVGTLTARDDNKIRWALIAGKIQNEREYRLHWAKWKSKFQSPADMLSITHSKNCQALVSDIDYRNYLHQWTCLPDQHDVIQARKAYDLQSDAIYKADLEWLRGIGWMPSDSVSVNHAKHAADIFSEKKYRTKIETLNFTPVDDRVDYVTAKQSGEILNDIKYRKDWNDTKSKYTLTETPQLHAAQEAARILDQYLYKESWEKQKATGYILPPDAVPFVHAHHSSDVQSELKYKADHVKQKGHYVGVPTMRDDPKLVWFEHAGQIQNDRLYKEHYHKTKAKINIPPDMVSVVAAKEGQILVSDIDYRNYLHQWTCHPDQNDVIQARKAYDLQSDNVYKADLEWLRGIGWIPLDSVDHVRVTRNQEMVNQIKYKKDALANYPNFTSVVDPPAVVLAKINSVNQSDVKYKETFNKLLKGKYIFSPDTPYITHSKDMGKLYSTILYKGAWEGTKAYGYTLDERYIPIVGAKHADFVNSELKYKETYEKQKGHYLAGKEISEFPNVVHCLDFQKMRSVLNYRRHYEDTKANVHIPNDMMNHVLAKRCQYILSDLEYRHYFHQWTSLPEEPNVIRARNAQEILSDNVYKDDLNWLKGIGCYVWDTPQILHAKKSYDLQSQILYTADGKENLKNYNMVTDTPLYVTALQSGINASEVKYKENYHQIKDKYTTVLETVDYDRTRNLKDLYSSNVYKEAWDKVKATSYILPSNTVSLTHAKNQKHLASHIKYREEYEKFKALYTLPKSVDDDPNTARCLRVGKFNIDRLYRSVYEKNKMKIHMVPDMVEMVTAKDSQKKVSEIDYRLHLHEWICHPDLQVNSHVRKVTDQISDIVYKDDLNWLKGIGCYVWDTPEILHAKHAYDLRNDIKYQAHVKKTRNNYKLVTDTPLYVQAVKSGKQLSDAVYHYDYVHSVRGKVAPTTKTVDLDRALHAYKLQSENLYRKDGLNSLPTGYRLPGDTPHFKHNKDIRYMSSYFKYKEVYEHFKANGYTLGPKDVPFVHVRRVNNVTSERLYRQLYHKLKDKIHTTPDTPEIRQVKKTQEAVSELIYKSDFFKMQGHMISMPYTPHVLHCRYVGDITSDIKYKEDLQILRGLGCFLYDTPDMVRSRHLRKLWSNYLYTDNARKMRDKYKVVLDTPEYRKVQELKTHLSELVYRAAGKKQKSIFTSVPDTPDLLRAKRGQKLQSQYLYVELATKERPHHHAGNQTTALKHARDVKDMVSEKKYKVQYEKMKDKYTPVPDTPILIRAKKAYWNASDLRYKETFQKTKGKYHTVKDALDIVYHRKVTDHISKIKYKENYMSQLGIWRSIPDRPEHFHHRAVTDAVSDVKYKEDLTWLKGIGCYAYDTPDFTLAEKNKTLYSKYKYKEVFERTKSDFKYEADCPINRHFKFATQLMNEKKYRADYEQRKDKYQLVVDEPRHLLAKIAGDQISQIKYRKNYEKTKDKFTSVVDTPEHLRTTKVNKQISDILYKLEYNKAKPRGYTTIHDTPMLLHVRKVKDEVSDLKYKEVYQRTKSNCTIEPDAVHIKAAKDAYKVNTNLDYKKQYEANKAHWRWTPDRPDFIQAAKSSLQQSDFEYKLDREFLKGCKLSVTDDKDMVLALRNSVIESDLKYKEKHVKERGTCHAVPDTPQILLAKTVSNLVSENKYKRHVKKHLAQGSYTTLPETRDTVHVKEVTKHVSDTNYKKKFVKERGKSNYSIMLEPPEVKHAMEVAKKQSDVAYKKDAKENLHYTTVADRPDIKKATQAAKQASEVEYRAKHRKEGSHGLSMLGRPDIEMAKKAATLSSQVKYRENFNKEKGKTPKYNPKESQLYKIMKDANNLASEVKYKADLKKLHKPVTDMKESLIMNHVLNTSHLASSYQYKKNYEKSKGHYHTIPDNLEQLHLKEATELQSIVKYKEKYEKERGKPMLDFETPTYITAKESQQMQSGKEYRKDYEESIKGRNLTGLEVTPALLHVKYATKIASEKEYRKDLEESIRGKGLSEMEDTPDMLRAKNATQILNEKEYKRDLELEVKGRGLNAMANETPDFMRARNATDIASQIKYKQLAEMEKANFTSVVDTPEIIHAQQVKNLSSQKKYKEDAEKCMSYYETVLDTPEMQRVRENQKNFSLLQYQCDLKNSKGKITVVQDTPEILRVKENQKNFSSVLYKEDVSPGTAIGKTPEMMRVKQTQDHISSVKYKETIGQGTPIPDLPEVKRVKETQKHISSVMYKENLGTGIPTPVTPEIERVKRNQENFSSILYKENVGKGTPTPVTPEMQRVKRNQENISSVLYKENMRKATPTPVTPEMERAKRNQENISSVLYSDSFRKQIQGKAAYVLDTPEMRRVRETQRHISTVKYHEDFEKHKGCFTPVVTDPITERVKKNTQDFSDINYRGIQRKVVEMEQKRNDQDQETITGLRVWRTNPGSVFDYDPAEDNIQSRSLHMLNAQAQRRSREQSRSASALSISGGEEKSEHSEAARLSTYSDGGVFFSATSAAYKHAKTTELPQQRSSSVATQQTTVSSIPSHPSTAGKIFRAMYDYMAADADEVSFRDGDAIVNVQAIDEGWMYGTVQRTGRTGMLPANYVEAI", "length": 2864, "header": "tr|A0A287AYJ9-1|A0A287B5G8_PIG Computationally mapped isoform of Nebulin OS=Sus scrofa OX=9823 GN=NEB PE=1 SV=1 CANONICAL=A0A287B5G8-1" }, "locus": { "chromosome": "15", "start_pos": 765584, "end_pos": 672790, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037316.2", "url": "https://www.ensembl.org/id/ENSSSCT00000037316.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000048954.1", "url": "https://www.ensembl.org/id/ENSSSCP00000048954.1" } ] } }, { "isoform_ac": "A0A287AZK6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AZK6/entry", "sequence": { "sequence": "MRVKNAQKLLNERLYRIRPEALKFTSIVDTPEVILAKINSVQISEPLYRDAWDKEKANVNIPADTPLMLQSKINAMQISNKQYQQAWEDVKMTGYDLRADAIGIQHAKASRDIASDYLYKTAYEKQKGHYIGCRSAKEDPKLVWAANVMKMQNDRLYKKAYNDHKARITIPVDMVSINAAKEGQALASDVDYRQYLHQWSCFPDQNDVIQARKAYDLQSDALYKADLEWLRGIGWMPQGSPEVLRVKNAQEILRDSVYRTPVVKLKYTSIVDTPEVVLAKSNAENISIPKYREVWDKDKTSVHIMPDTPEINLARANALNVSNKIYREGWDEMKMSCDVRLDAIPIQAAKASREIASDYKYKLDHEKQKGHYVGTLTARDDNKIRWALIAGKIQNEREYRLHWAKWKSKFQSPADMLSITHSKNCQALVSDIDYRNYLHQWTCLPDQHDVIQARKAYDLQSDAIYKADLEWLRGIGWMPSDSVSVNHAKHAADIFSEPDVHFSKYPYLYKESWEKQKATGYILPPDAVPFVHAHHSSDVQSELKYKADHVKQKGHYVGVPTMRDDPKLVWFEHAGQIQNDRLYKEHYHKTKAKINIPPDMVSVVAAKEGQILVSDIDYRNYLHQWTCHPDQNDVIQARKAYDLQSDNVYKADLEWLRGIGWIPLDSVDHVRVTRNQEMVNQIKYKKDALANYPNFTSVVDPPAVVLAKINSVNQSDVKYKETFNKLLKGKYIFSPDTPYITHSKDMGKLYSTILYKGAWEGTKAYGYTLDERYIPIVGAKHADFVNSELKYKETYEKQKGHYLAGKEISEFPNVVHCLDFQKMRSVLNYRRHYEDTKANVHIPNDMMNHVLAKRCQYILSDLEYRHYFHQWTSLPEEPNVIRARNAQEILSDNVYKDDLNWLKGIGCYVWDTPQILHAKKSYDLQSQILYTADGKENLKNYNMVTDTPLYVTALQSGINASEVKYKENYHQIKDKYTTVLETVDYDRTRNLKDLYSSNVYKEAWDKVKATSYILPSNTVSLTHAKNQKHLASHIKYREEYEKFKALYTLPKSVDDDPNTARCLRVGKFNIDRLYRSVYEKNKMKIHMVPDMVEMVTAKDSQKKVSEIDYRLHLHEWICHPDLQVNSHVRKVTDQISDIVYKDDLNWLKGIGCYVWDTPEILHAKHAYDLRNDIKYQAHVKKTRNNYKLVTDTPLYVQAVKSGKQLSDAVYHYDYVHSVRGKVAPTTKTVDLDRALHAYKLQSENLYRKDGLNSLPTGYRLPGDTPHFKHNKDIRYMSSYFKYKEVYEHFKANGYTLGPKDVPFVHVRRVNNVTSERLYRQLYHKLKDKIHTTPDTPEIRQVKKTQEAVSELIYKSDFFKMQGHMISMPYTPHVLHCRYVGDITSDIKYKEDLQILRGLGCFLYDTPDMVRSRHLRKLWSNYLYTDNARKMRDKYKVVLDTPEYRKVQELKTHLSELVYRAAGKKQKSIFTSVPDTPDLLRAKRGQKLQSQYLYVELATKERPHHHAGNQTTALKHARDVKDMVSEKKYKVQYEKMKDKYTPVPDTPILIRAKKAYWNASDLRYKETFQKTKGKYHTVKDALDIVYHRKVTDHISKIKYKENYMSQLGIWRSIPDRPEHFHHRAVTDAVSDVKYKEDLTWLKGIGCYAYDTPDFTLAEKNKTLYSKYKYKEVFERTKSDFKYEADCPINRHFKFATQLMNEKKYRADYEQRKDKYQLVVDEPRHLLAKIAGDQISQIKYRKNYEKTKDKFTSVVDTPEHLRTTKVNKQISDILYKLEYNKAKPRGYTTIHDTPMLLHVRKVKDEVSDLKYKEVYQRTKSNCTIEPDAVHIKAAKDAYKVNTNLDYKKQYEANKAHWRWTPDRPDFIQAAKSSLQQSDFEYKLDREFLKGCKLSVTDDKDMVLALRNSVIESDLKYKEKHVKERGTCHAVPDTPQILLAKTVSNLVSENKYKRHVKKHLAQGSYTTLPETRDTVHVKEVTKHVSDTNYKKKFVKERGKSNYSIMLEPPEVKHAMEVAKKQSDVAYKKDAKENLHYTTVADRPDIKKATQAAKQASEVEYRAKHRKEGSHGLSMLGRPDIEMAKKAATLSSQVKYRENFNKEKGKTPKYNPKESQLYKIMKDANNLASEVKYKADLKKLHKPVTDMKESLIMNHVLNTSHLASSYQYKKNYEKSKGHYHTIPDNLEQLHLKEATELQSIVKYKEKYEKERGKPMLDFETPTYITAKESQQMQSGKEYRKDYEESIKGRNLTGLEVTPALLHVKYATKIASEKEYRKDLEESIRGKGLSEMEDTPDMLRAKNATQILNEKEYKRDLELEVKGRGLNAMANETPDFMRARNATDIASQIKYKQLAEMEKANFTSVVDTPEIIHAQQVKNLSSQKKYKEDAEKCMSYYETVLDTPEMQRVRENQKNFSLLQYQCDLKNSKGKITVVQDTPEILRVKENQKNFSSVLYKEDVSPGTAIGKTPEMMRVKQTQDHISSVLYKENMGKGTPLPVTPEMERVKHNQENISSILYKENVGKGTPTPVTPEMQRVKRNQENISSVIYKENLGKATPTPFTPEMERVKRNQENFSSVLYSDSFRKQIQGKAAYVLDTPEMRRVRETQRHISTVKYHEDFEKHKGCFTPVVTDPITERVKKNTQDFSDINYRGIQRKVVEMEQKRNDQDQETITGLRVWRTNPGSVFDYDPAEDNIQSRSLHMLNAQAQRRSREQSRSASALSISGGEEKSEHSEAARLSTYSDGGVFFSATSAAYKHAKTTELPQQRSSSVATQQTTVSSIPSHPSTAGKIFRAMYDYMAADADEVSFRDGDAIVNVQAIDEGWMYGTVQRTGRTGMLPANYVEAI", "length": 2842, "header": "tr|A0A287AZK6-1|A0A287B5G8_PIG Computationally mapped isoform of Nebulin OS=Sus scrofa OX=9823 GN=NEB PE=1 SV=3 CANONICAL=A0A287B5G8-1" }, "locus": { "chromosome": "15", "start_pos": 765584, "end_pos": 671618, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047615.3", "url": "https://www.ensembl.org/id/ENSSSCT00000047615.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049400.3", "url": "https://www.ensembl.org/id/ENSSSCP00000049400.3" } ] } }, { "isoform_ac": "A0A287B5G8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B5G8/entry", "sequence": { "sequence": "MADDEEYEEVVEYYTEETVYEEVPGETITEVYETTTTRTSGYEQSDTSQPAVAQPMPSKPVERKKVIRKKVDPSKFMTPYIAHSQKMQDLFSTNKYKKNYEKAKGKPYAITTDTPELRRIKKVQDQLSEVKYRIDGDVAKTICHVDEKAKDIEHAKKVSQQVSKVLYKQNWEDTKDKYLLPPDAPELVQAIKNTAMFSKKLYTEDWEADKSLFYPYNDSPELRRVAQAQKALSDIAYKKGHAEQQTQFTSLPDPPDIEFAKKVTNQVSKQKYKEDYENKIKGKWSETPCFEIATARMNAKNISTRKYQEDFENMKDQIYFMQTETPEYKVNKQAGTAASKVKYKEDYEKNKGKADYNVLPASENPLLRHLKAAGDALSDKRYKENYEKTKAKSINYCETPKFKLDTVLHNFSSDTKYKDSYLKNILGHYVGSFEDPYHTHCMKVAAENSDKNYKAEYEEDRGKGFFPQTITQEYEAIKKLDQCKDHTYKVHPDKTKFTQVTDSPVLVQAQVNSKQLSDLNYKAKHENEKFKCHIPPDTPAFIQHKVNAYNLSDNVYKHDWEKTKAKKFDIKVDAIPLLAAKANTKNTSDVMYKKDYEKSKGKMIGALSINDDPKMLHSLKTAKNQSDRLYKENYEKTKAKSMNYCETPKYQLDTLLKNFSEAKYKDSYVQNVLGHYIGSFEDPYQLHCMKVSAQNSDKNYKAEYEEDKGKCYFPQTITQEYEAIKKLDQCKDHTYKVHPDKTKFTAVTDTPVLLQAQLNTKQLSDLNYKAKHEGEKFKCNIPADAPQFIQHRVNAYNLSDNVYKHDWEKTKAKKFDIKVDAIPLLAAKANTKNTSDVMYKKDYEKSKGKMIGALSINDDPKMLHSLKTAKNQSDREYRKDYEKSKTIYTAPLDMLQVTQAKKSQAIASDVDYKHLLHNYSYPPDSINVDLAKKAYALQSDVEYKADYNSWMKGCGWIPFGSLEMEKAKRASDILNEKKYRQHPETLKFTSIEDAPIIVQSKINQAQRSDIAYKAKGEEIIHKYSLPADLPFIQAKVNAYNISESMYKADLKDLSKKGYDLRTDAIPIKAAKAARQAASDVQYKKDYEKAKGKMVGFQSLQDDPKLVHYMNVAKIQSDREYKKDYEKTKTKYNTPHDMFNVVAAKKAQDVASNVNYRHSLHHYTYLPDAMDLELSKNMMHIQSDNAYKEDYNTWMKGIGWIPLGSLEVEKVKKAGDALNEKKYRQHPDTLKFTSIVDSPVMVQAKQNTRQVSDILYKAKGEDVKHKYTMGPDLPQFLQAKCNAYNISDVCYKRDWHDLIAKGNNVLGDAIPITAAKASRNIASDYKYKEAYEKAKGKHVGFRSLQDDPKLVHYMNVAKLQSDREYKKNYENTKTSYHTPGDMVSITAAKMAQDVATNVNYKQPIHHYTYLPDALSLEHTRNVNQIQSDNVYKDEYNHFFKGIGWIPLGSLEVEKVKKAGDALNERKYRQHPDTIKFTSVPDSMGMVLAQHNTKQLSDLNYKVEGEKLKHKYTMDPDVPQFIQAKVNAINMSDAHYKADWKKTLAKGYDLTPDAIPIVAAKSSRNIASDFKYKEAYEKAKGKQVGFRSLQDDPKLVHYMNVAKIQSDREYKKGYEASKTRYHTPLDMLSVTAAKKSQEVATNTNYKQPFHHYTLLPDALNVEHSRNAMQIQSDNLYKSDFTNWMKGIGWIPMESLEVEKAKKAGEILSEKKYRQHPEKLKFTYAMDTMEQALNKSNKLIMDKRLYTEKWNKDKTTIHVMPDTPDILLSRVNQITLSDKLYKAGWEEEKKKGYDLRPDAISIKAARASRDIASDYKYKQAYEQAKGKHIGFRSLEDDPKLVHFMQVAKMQSDREYKKAYEKSKTSFHTPVDMLSVVAAKKSQEVATNANYRNVIHTYNMLPDAMSFELAKNMMQLQSDNQYKADYADFMKGIGWLPLGSLEAEKNKKAMEIISEKKYRQHPDTLKYSTLMDSMNMVLAKNNAKIMNEHLYKQAWEADKTKVHIMPDIPQIILAKANAVNMSDKLYKLSLEESKKKGYDLRTDAISIQAAKASRDIASDYKYKHSYEKERGKMVGFRSLEDDPKLVHSMQVAKMQSDREYKKSYEKTKTSYHTPADMLSVTAARDAQANITNTNYKHLIHKYILLPDAMNIQLSKNMNHIQSDNEYKQDYNECYKGLGWSPAGSLEVEKAKKATEYASDQKYRQHPSNFQFQKLNDSMDMVLAKQNAHTMNKYLYTADWNKDKTKIHVMPDTPDILQAKQNQTLFSQKLYKLGWEEALKKGYDLPVDAISVQLAKVSRDNASDFKYKQGYRKQLGHHIGFRNLQDDPKLVLSMNVAKMQSEREYKKDFEKWKTKFTSPVDMLGVVLAKKCQALVSDVDYKNYLHQWTCLPDQNDVIQAKRSYELQSENLYKSDLEWLRGIGWSPLGSLEAEKNKRASEIISEKKYRQPPDRNKFTSIPDAMDIVLAKTNAKNRSDRLYREAWDKDKTQVHIMPDTPDIILAKANLINSSDKLYRMGYEELKKKGYDLPVDAIPIKAAKASREIASEYKYKEGFRKQLGHHVGARNIEDDPKMMWSMHVAKIQSDREYKKDFEKWKTKFSSPVDMLGVVLAKKCQTLVSDIDYKNYLHQWTCLPDQSDVIHARRAYDLQSDNLYKSDLQWLKGIGWLPSGSLEDEKNKRATQILSDHVYRQHPDKFKFSSLMDSIPMVLAKNNAITMNHRLYTEAWDKDKTTVHIMPDTPEVLLAKQNKINYSEKLYKLGLEEAKRKGYDMRLDAIPIRAAKASRDIASEFKYKEGYRKQLGHHIGARAIHDDPKMMWSMHVAKVQSDREYKKDFEKWKTKFSSPVDMLGVVLAKKCQTLVSDIDYKNYLHQWTCLPDQSDVIHARRAYDLQSDNMYKSDLQWLRGIGWVPIGSLDVEKCKRATEILSDKIYRQPPDTFKFTSVPDSLEQVLAKNNAVNMNKRLYTEAWDKDKTQVHIMPDTPEIMLARQNRLNYSETLYKLANEEAKKKGYDLRSDAIPIVAAKASRDIVSDYKYKDGYRKQLGHHIGARNIEDDPKMMWSMHVAKIQSDREYKKDFEKWKTKFSSPVDMLGLVQAKKCQILVSDVDYKNYLHQWTCLPDQNDVIHARQAYDLQSDNIYKSDLQWLKGIGWVPIGSVDVVKCKRAAEILSDHIYRQPPDKLKFTSVPDSLEQVLAKNNAINMNKRLYTEAWDKDKTQIHIMPDTPEIMLARQNKINYSESLYRQAMEEAKKEGYDLRSDAIPIVAAKASRDIASDYKYKEAYRKQLGHHIGARAVHDDPKMMWSLHVAKMQSDREYKKDFEKYKTRFSSPVDMLGIVLAKKCQTLVSDVDYKHPLHEWTCLPDQNDIIHARKAYDLQSDNLYKSDLEWMKGIGWIPLGSVEVVKAKRAGEILSDNIYRQRPDTLKFTSVTDSPELVLAKNNALNMNKRLYTEAWDNDKKTIHVMPDTPEIMLAKLNRINYSDKLYRLALEESKKEGCDLRVDAIPIQAAKASREIASDYKYKEAYRKQLGHHIGARNIEDDPKMMWSIHAAKIQSDREYKKDFEKWKTRFSSPVDMLGLVQAKKCQILVSDIDYKHPLHEWICLPDQNDIIQARKAYDLQSDAIYKADLEWLRGIGWVPLGSVEVEKVKRAGEILSERKYRQPADQLKFTCITDTPEIVLAKNNALTMSKHLYTEAWDTDKTSIHVMPDTPEILLAKSNSANISQKLYTKGWDESKMKDYDLKADAISIKSAKASRDIASDYKYKEAYEKQKGHHIGAQSVEDDPKIMCAIHAGKIQSEREYKKDFQKWKTKFTSPVDMLGILLAKKCQTLVSDIDYRNYLHHWTCLPDQNDIIQARKAYELQSDALYKADLEWLRGIGWMPQGSPEVLRVKNAQEILRDSVYRTPVVKLKYTSIVDTPEVVLAKSNAENISIPKYREVWDKDKTSVHIMPDTPEINLARANALNVSNKIYREGWDEMKMSCDVRLDAIPIQAAKASREIASDYKYKLDHEKQKGHYVGTLTARDDNKIRWALIAGKIQNEREYRLHWAKWKSKFQSPADMLSITHSKNCQALVSDIDYRNYLHQWTCLPDQHDVIQARKAYDLQSDAIYKADLEWLRGIGWMPSDSVSVNHAKHAADIFSEKKYRTKIETLNFTPVDDRVDYVTAKQSGEILNDIKYRKDWNDTKSKYTLTETPQLHAAQEAARILDQYLYKESWEKQKATGYILPPDAVPFVHAHHSSDVQSELKYKADHVKQKGHYVGVPTMRDDPKLVWFEHAGQIQNDRLYKEHYHKTKAKINIPPDMVSVVAAKEGQILVSDIDYRNYLHQWTCHPDQNDVIQARKAYDLQSDNVYKADLEWLRGIGWIPLDSVDHVRVTRNQEMVNQIKYKKDALANYPNFTSVVDPPAVVLAKINSVNQSDVKYKETFNKLLKGKYIFSPDTPYITHSKDMGKLYSTILYKGAWEGTKAYGYTLDERYIPIVGAKHADFVNSELKYKETYEKQKGHYLAGKEISEFPNVVHCLDFQKMRSVLNYRRHYEDTKANVHIPNDMMNHVLAKRCQYILSDLEYRHYFHQWTSLPEEPNVIRARNAQEILSDNVYKDDLNWLKGIGCYVWDTPQILHAKKSYDLQSQILYTADGKENLKNYNMVTDTPLYVTALQSGINASEVKYKENYHQIKDKYTTVLETVDYDRTRNLKDLYSSNVYKEAWDKVKATSYILPSNTVSLTHAKNQKHLASHIKYREEYEKFKALYTLPKSVDDDPNTARCLRVGKFNIDRLYRSVYEKNKMKIHMVPDMVEMVTAKDSQKKVSEIDYRLHLHEWICHPDLQVNSHVRKVTDQISDIVYKDDLNWLKGIGCYVWDTPEILHAKHAYDLRNDIKYQAHVKKTRNNYKLVTDTPLYVQAVKSGKQLSDAVYHYDYVHSVRGKVAPTTKTVDLDRALHAYKLQSENLYRKDGLNSLPTGYRLPGDTPHFKHNKDIRYMSSYFKYKEVYEHFKANGYTLGPKDVPFVHVRRVNNVTSERLYRQLYHKLKDKIHTTPDTPEIRQVKKTQEAVSELIYKSDFFKMQGHMISMPYTPHVLHCRYVGDITSDIKYKEDLQILRGLGCFLYDTPDMVRSRHLRKLWSNYLYTDNARKMRDKYKVVLDTPEYRKVQELKTHLSELVYRAAGKKQKSIFTSVPDTPDLLRAKRGQKLQSQYLYVELATKERPHHHAGNQTTALKHARDVKDMVSEKKYKVQYEKMKDKYTPVPDTPILIRAKKAYWNASDLRYKETFQKTKGKYHTVKDALDIVYHRKVTDHISKIKYKENYMSQLGIWRSIPDRPEHFHHRAVTDAVSDVKYKEDLTWLKGIGCYAYDTPDFTLAEKNKTLYSKYKYKEVFERTKSDFKYEADCPINRHFKFATQLMNEKKYRADYEQRKDKYQLVVDEPRHLLAKIAGDQISQIKYRKNYEKTKDKFTSVVDTPEHLRTTKVNKQISDILYKLEYNKAKPRGYTTIHDTPMLLHVRKVKDEVSDLKYKEVYQRTKSNCTIEPDAVHIKAAKDAYKVNTNLDYKKQYEANKAHWRWTPDRPDFIQAAKSSLQQSDFEYKLDREFLKGCKLSVTDDKDMVLALRNSVIESDLKYKEKHVKERGTCHAVPDTPQILLAKTVSNLVSENKYKRHVKKHLAQGSYTTLPETRDTVHVKEVTKHVSDTNYKKKFVKERGKSNYSIMLEPPEVKHAMEVAKKQSDVAYKKDAKENLHYTTVADRPDIKKATQAAKQASEVEYRAKHRKEGSHGLSMLGRPDIEMAKKAATLSSQVKYRENFNKEKGKTPKYNPKESQLYKIMKDANNLASEVKYKADLKKLHKPVTDMKESLIMNHVLNTSHLASSYQYKKNYEKSKGHYHTIPDNLEQLHLKEATELQSIVKYKEKYEKERGKPMLDFETPTYITAKESQQMQSGKEYRKDYEESIKGRNLTGLEVTPALLHVKYATKIASEKEYRKDLEESIRGKGLSEMEDTPDMLRAKNATQILNEKEYKRDLELEVKGRGLNAMANETPDFMRARNATDIASQIKYKQLAEMEKANFTSVVDTPEIIHAQQVKNLSSQKKYKEDAEKCMSYYETVLDTPEMQRVRENQKNFSLLQYQCDLKNSKGKITVVQDTPEILRVKENQKNFSSVLYKEDVSPGTAIGKTPEMMRVKQTQDHISSVKYKETIGQGTPIPDLPEVKRVKETQKHISSVMYKENLGTGIPTPVTPEIERVKRNQENFSSVLYKENLGKGTPTPITPEMERVKRNQENFSSVLYKENMGKGTPLPVTPEMERVKHNQENISSILYKENVGKGTPTPVTPEMQRVKRNQENISSVIYKENLGKATPTPFTPEMERVKRNQENFSSVLYKENMRKATPTPVTPEMERAKRNQENISSVLYSDSFRKQIQGKAAYVLDTPEMRRVRETQRHISTVKYHEDFEKHKGCFTPVVTDPITERVKKNTQDFSDINYRGIQRKVVEMEQKRNDQDQETITGLRVWRTNPGSVFDYDPAEDNIQSRSLHMLNAQAQRRSREQSRSASALSISGGEEKSEHSEAARLSTYSDGGVFFSATSAAYKHAKTTELPQQRSSSVATQQTTVSSIPSHPSTAGKIFRAMYDYMAADADEVSFRDGDAIVNVQAIDEGWMYGTVQRTGRTGMLPANYVEAI", "length": 6665, "header": "tr|A0A287B5G8-1|A0A287B5G8_PIG Isoform 1 of Nebulin OS=Sus scrofa OX=9823 GN=NEB PE=1 SV=2 CANONICAL=A0A287B5G8-1" }, "locus": { "chromosome": "15", "start_pos": 765584, "end_pos": 547582, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061764.3", "url": "https://www.ensembl.org/id/ENSSSCT00000061764.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051347.2", "url": "https://www.ensembl.org/id/ENSSSCP00000051347.2" } ] } }, { "isoform_ac": "A0A287B9W0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9W0/entry", "sequence": { "sequence": "MRVKNAQKLLNERLYRIRPEALKFTSIVDTPEVILAKINSVQISEPLYRDAWDKEKANVNIPADTPLMLQSKINAMQISNKQYQQAWEDVKMTGYDLRADAIGIQHAKASRDIASDYLYKTAYEKQKGHYIGCRSAKEDPKLVWAANVMKMQNDRLYKKAYNDHKARITIPVDMVSINAAKEGQALASDVDYRQYLHQWSCFPDQNDVIQARKAYDLQSDALYKADLEWLRGIGWMPQGSPEVLRVKNAQEILRDSVYRTPVVKLKYTSIVDTPEVVLAKSNAENISIPKYREVWDKDKTSVHIMPDTPEINLARANALNVSNKIYREGWDEMKMSCDVRLDAIPIQAAKASREIASDYKYKLDHEKQKGHYVGTLTARDDNKIRWALIAGKIQNEREYRLHWAKWKSKFQSPADMLSITHSKNCQALVSDIDYRNYLHQWTCLPDQHDVIQARKAYDLQSDAIYKADLEWLRGIGWMPSDSVSVNHAKHAADIFSEPDVHFSKYPYLYKESWEKQKATGYILPPDAVPFVHAHHSSDVQSELKYKADHVKQKGHYVGVPTMRDDPKLVWFEHAGQIQNDRLYKEHYHKTKAKINIPPDMVSVVAAKEGQILVSDIDYRNYLHQWTCHPDQNDVIQARKAYDLQSDNVYKADLEWLRGIGWIPLDSVDHVRVTRNQEMVNQIKYKKDALANYPNFTSVVDPPAVVLAKINSVNQSDVKYKETFNKLLKGKYIFSPDTPYITHSKDMGKLYSTILYKGAWEGTKAYGYTLDERYIPIVGAKHADFVNSELKYKETYEKQKGHYLAGKEISEFPNVVHCLDFQKMRSVLNYRRHYEDTKANVHIPNDMMNHVLAKRCQYILSDLEYRHYFHQWTSLPEEPNVIRARNAQEILSDNVYKDDLNWLKGIGCYVWDTPQILHAKKSYDLQSQILYTADGKENLKNYNMVTDTPLYVTALQSGINASEVKYKENYHQIKDKYTTVLETVDYDRTRNLKDLYSSNVYKEAWDKVKATSYILPSNTVSLTHAKNQKHLASHIKYREEYEKFKALYTLPKSVDDDPNTARCLRVGKFNIDRLYRSVYEKNKMKIHMVPDMVEMVTAKDSQKKVSEIDYRLHLHEWICHPDLQVNSHVRKVTDQISDIVYKDDLNWLKGIGCYVWDTPEILHAKHAYDLRNDIKYQAHVKKTRNNYKLVTDTPLYVQAVKSGKQLSDAVYHYDYVHSVRGKVAPTTKTVDLDRALHAYKLQSENLYRKDGLNSLPTGYRLPGDTPHFKHNKDIRYMSSYFKYKEVYEHFKANGYTLGPKDVPFVHVRRVNNVTSERLYRQLYHKLKDKIHTTPDTPEIRQVKKTQEAVSELIYKSDFFKMQGHMISMPYTPHVLHCRYVGDITSDIKYKEDLQILRGLGCFLYDTPDMVRSRHLRKLWSNYLYTDNARKMRDKYKVVLDTPEYRKVQELKTHLSELVYRAAGKKQKSIFTSVPDTPDLLRAKRGQKLQSQYLYVELATKERPHHHAGNQTTALKHARDVKDMVSEKKYKVQYEKMKDKYTPVPDTPILIRAKKAYWNASDLRYKETFQKTKGKYHTVKDALDIVYHRKVTDHISKIKYKENYMSQLGIWRSIPDRPEHFHHRAVTDAVSDVKYKEDLTWLKGIGCYAYDTPDFTLAEKNKTLYSKYKYKEVFERTKSDFKYEADCPINRHFKFATQLMNEKKYRADYEQRKDKYQLVVDEPRHLLAKIAGDQISQIKYRKNYEKTKDKFTSVVDTPEHLRTTKVNKQISDILYKLEYNKAKPRGYTTIHDTPMLLHVRKVKDEVSDLKYKEVYQRTKSNCTIEPDAVHIKAAKDAYKVNTNLDYKKQYEANKAHWRWTPDRPDFIQAAKSSLQQSDFEYKLDREFLKGCKLSVTDDKDMVLALRNSVIESDLKYKEKHVKERGTCHAVPDTPQILLAKTVSNLVSENKYKRHVKKHLAQGSYTTLPETRDTVHVKEVTKHVSDTNYKKKFVKERGKSNYSIMLEPPEVKHAMEVAKKQSDVAYKKDAKENLHYTTVADRPDIKKATQAAKQASEVEYRAKHRKEGSHGLSMLGRPDIEMAKKAATLSSQVKYRENFNKEKGKTPKYNPKESQLYKIMKDANNLASEVKYKADLKKLHKPVTDMKESLIMNHVLNTSHLASSYQYKKNYEKSKGHYHTIPDNLEQLHLKEATELQSIVKYKEKYEKERGKPMLDFETPTYITAKESQQMQSGKEYRKDYEESIKGRNLTGLEVTPALLHVKYATKIASEKEYRKDLEESIRGKGLSEMEDTPDMLRAKNATQILNEKEYKRDLELEVKGRGLNAMANETPDFMRARNATDIASQIKYKQLAEMEKANFTSVVDTPEIIHAQQVKNLSSQKKYKEDAEKCMSYYETVLDTPEMQRVRENQKNFSLLQYQCDLKNSKGKITVVQDTPEILRVKENQKNFSSVLYKEDVSPGTAIGKTPEMMRVKQTQDHISSVMYKENLGTGIPTPVTPEIERVKRNQENFSSVLYKENLGKGTPTPITPEMERRVKRNQENFSSILYKENLSKGTPLPVTPEMERVKRNQENFSSVLYSDSFRKQIQGKAAYVLDTPEMRRVRETQRHISTVKYHEDFEKHKGCFTPVVTDPITERVKKNTQDFSDINYRGIQRKVVEMEQKRNDQDQETITGLRVWRTNPGSVFDYDPAEDNIQSRSLHMLNAQAQRRSREQSRSASALSISGGEEKSEHSEAARLSTYSDGGVFFSATSAAYKHAKTTELPQQRSSSVATQQTTVSSIPSHPSTAGKIFRAMYDYMAADADEVSFRDGDAIVNVQAIDEGWMYGTVQRTGRTGMLPANYVEAI", "length": 2843, "header": "tr|A0A287B9W0-1|A0A287B9W0_PIG Computationally mapped isoform of Nebulin OS=Sus scrofa OX=9823 GN=NEB PE=1 SV=2 CANONICAL=A0A287B5G8-1" }, "locus": { "chromosome": "15", "start_pos": 765584, "end_pos": 671618, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056777.3", "url": "https://www.ensembl.org/id/ENSSSCT00000056777.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052873.2", "url": "https://www.ensembl.org/id/ENSSSCP00000052873.2" } ] } }, { "isoform_ac": "A0A287BBK6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK6/entry", "sequence": { "sequence": "MRVKNAQKLLNERLYRIRPEALKFTSIVDTPEVILAKINSVQISEPLYRDAWDKEKANVNIPADTPLMLQSKINAMQISNKQYQQAWEDVKMTGYDLRADAIGIQHAKASRDIASDYLYKTAYEKQKGHYIGCRSAKEDPKLVWAANVMKMQNDRLYKKAYNDHKARITIPVDMVSINAAKEGQALASDVDYRQYLHQWSCFPDQNDVIQARKAYDLQSDALYKADLEWLRGIGWMPQGSPEVLRVKNAQEILRDSVYRTPVVKLKYTSIVDTPEVVLAKSNAENISIPKYREVWDKDKTSVHIMPDTPEINLARANALNVSNKIYREGWDEMKMSCDVRLDAIPIQAAKASREIASDYKYKLDHEKQKGHYVGTLTARDDNKIRWALIAGKIQNEREYRLHWAKWKSKFQSPADMLSITHSKNCQALVSDIDYRNYLHQWTCLPDQHDVIQARKAYDLQSDAIYKADLEWLRGIGWMPSDSVSVNHAKHAADIFSEKKYRTKIETLNFTPVDDRVDYVTAKQSGEILNDIKYRKDWNDTKSKYTLTETPQLHAAQEAARILDQYLYKESWEKQKATGYILPPDAVPFVHAHHSSDVQSELKYKADHVKQKGHYVGVPTMRDDPKLVWFEHAGQIQNDRLYKEHYHKTKAKINIPPDMVSVVAAKEGQILVSDIDYRNYLHQWTCHPDQNDVIQARKAYDLQSDNVYKADLEWLRGIGWIPLDSVDHVRVTRNQEMVNQIKYKKDALANYPNFTSVVDPPAVVLAKINSVNQSDVKYKETFNKLLKGKYIFSPDTPYITHSKDMGKLYSTILYKGAWEGTKAYGYTLDERYIPIVGAKHADFVNSELKYKETYEKQKGHYLAGKEISEFPNVVHCLDFQKMRSVLNYRRHYEDTKANVHIPNDMMNHVLAKRCQYILSDLEYRHYFHQWTSLPEEPNVIRARNAQEILSDNVYKDDLNWLKGIGCYVWDTPQILHAKKSYDLQSQILYTADGKENLKNYNMVTDTPLYVTALQSGINASEVKYKENYHQIKDKYTTVLETVDYDRTRNLKDLYSSNVYKEAWDKVKATSYILPSNTVSLTHAKNQKHLASHIKYREEYEKFKALYTLPKSVDDDPNTARCLRVGKFNIDRLYRSVYEKNKMKIHMVPDMVEMVTAKDSQKKVSEIDYRLHLHEWICHPDLQVNSHVRKVTDQISDIVYKDDLNWLKGIGCYVWDTPEILHAKHAYDLRNDIKYQAHVKKTRNNYKLVTDTPLYVQAVKSGKQLSDAVYHYDYVHSVRGKVAPTTKTVDLDRALHAYKLQSENLYRKDGLNSLPTGYRLPGDTPHFKHNKDIRYMSSYFKYKEVYEHFKANGYTLGPKDVPFVHVRRVNNVTSERLYRQLYHKLKDKIHTTPDTPEIRQVKKTQEAVSELIYKSDFFKMQGHMISMPYTPHVLHCRYVGDITSDIKYKEDLQILRGLGCFLYDTPDMVRSRHLRKLWSNYLYTDNARKMRDKYKVVLDTPEYRKVQELKTHLSELVYRAAGKKQKSIFTSVPDTPDLLRAKRGQKLQSQYLYVELATKERPHHHAGNQTTALKHARDVKDMVSEKKYKVQYEKMKDKYTPVPDTPILIRAKKAYWNASDLRYKETFQKTKGKYHTVKDALDIVYHRKVTDHISKIKYKENYMSQLGIWRSIPDRPEHFHHRAVTDAVSDVKYKEDLTWLKGIGCYAYDTPDFTLAEKNKTLYSKYKYKEVFERTKSDFKYEADCPINRHFKFATQLMNEKKYRADYEQRKDKYQLVVDEPRHLLAKIAGDQISQIKYRKNYEKTKDKFTSVVDTPEHLRTTKVNKQISDILYKLEYNKAKPRGYTTIHDTPMLLHVRKVKDEVSDLKYKEVYQRTKSNCTIEPDAVHIKAAKDAYKVNTNLDYKKQYEANKAHWRWTPDRPDFIQAAKSSLQQSDFEYKLDREFLKGCKLSVTDDKDMVLALRNSVIESDLKYKEKHVKERGTCHAVPDTPQILLAKTVSNLVSENKYKRHVKKHLAQGSYTTLPETRDTVHVKEVTKHVSDTNYKKKFVKERGKSNYSIMLEPPEVKHAMEVAKKQSDVAYKKDAKENLHYTTVADRPDIKKATQAAKQASEVEYRAKHRKEGSHGLSMLGRPDIEMAKKAATLSSQVKYRENFNKEKGKTPKYNPKESQLYKIMKDANNLASEVKYKADLKKLHKPVTDMKESLIMNHVLNTSHLASSYQYKKNYEKSKGHYHTIPDNLEQLHLKEATELQSIVKYKEKYEKERGKPMLDFETPTYITAKESQQMQSGKEYRKDYEESIKGRNLTGLEVTPALLHVKYATKIASEKEYRKDLEESIRGKGLSEMEDTPDMLRAKNATQILNEKEYKRDLELEVKGRGLNAMANETPDFMRARNATDIASQIKYKQLAEMEKANFTSVVDTPEIIHAQQVKNLSSQKKYKEDAEKCMSYYETVLDTPEMQRVRENQKNFSLLQYQCDLKNSKGKITVVQDTPEILRVKENQKNFSSVLYKEDVSPGTAIGKTPEMMRVKQTQDHISSVKYKETIGQGTPIPDLPEVKRVKETQKHISSVMYKENLGTGIPTPVTPEIERVKRNQENFSSVLYSDSFRKQIQGKAAYVLDTPEMRRVRETQRHISTVKYHEDFEKHKGCFTPVVTDPITERVKKNTQDFSDINYRGIQRKVVEMEQKRNDQDQETITGLRVWRTNPGSVFDYDPAEDNIQSRSLHMLNAQAQRRSREQSRSASALSISGGEEKSEHSEAARLSTYSDGGVFFSATSAAYKHAKTTELPQQRSSSVATQQTTVSSIPSHPSTAGKIFRAMYDYMAADADEVSFRDGDAIVNVQAIDEGWMYGTVQRTGRTGMLPANYVEAI", "length": 2869, "header": "tr|A0A287BBK6-1|A0A287BBK6_PIG Computationally mapped isoform of Nebulin OS=Sus scrofa OX=9823 GN=NEB PE=1 SV=1 CANONICAL=A0A287B5G8-1" }, "locus": { "chromosome": "15", "start_pos": 765584, "end_pos": 671618, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048646.3", "url": "https://www.ensembl.org/id/ENSSSCT00000048646.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053496.1", "url": "https://www.ensembl.org/id/ENSSSCP00000053496.1" } ] } }, { "isoform_ac": "A0A287BN18-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BN18/entry", "sequence": { "sequence": "MIAVQYKKDYEKAKGKMVGFQSLQDDPKLVHYMNVAKIQSDREYKKDYEKTKTKYNTPHDMFNVVAAKKAQDVASNVNYRHSLHHYTYLPDAMDLELSKNMMHIQSDNAYKEDYNTWMKGIGWIPLGSLEVEKVKKAGDALNEKKYRQHPDTLKFTSIVDSPVMVQAKQNTRQVSDILYKAKGEDVKHKYTMGPDLPQFLQAKCNAYNISDVCYKRDWHDLIAKGNNVLGDAIPITAAKASRNIASDYKYKEAYEKAKGKHVGFRSLQDDPKLVHYMNVAKLQSDREYKKNYENTKTSYHTPGDMVSITAAKMAQDVATNVNYKQPIHHYTYLPDALSLEHTRNVNQIQSDNVYKDEYNHFFKGIGWIPLGSLEVEKVKKAGDALNERKYRQHPDTIKFTSVPDSMGMVLAQHNTKQLSDLNYKVEGEKLKHKYTMDPDVPQFIQAKVNAINMSDAHYKADWKKTLAKGYDLTPDAIPIVAAKSSRNIASDFKYKEAYEKAKGKQVGFRSLQDDPKLVHYMNVAKIQSDREYKKGYEASKTRYHTPLDMLSVTAAKKSQEVATNTNYKQPFHHYTLLPDALNVEHSRNAMQIQSDNLYKSDFTNWMKGIGWIPMESLEVEKAKKAGEILSEKKYRQHPEKLKFTYAMDTMEQALNKSNKLIMDKRLYTEKWNKDKTTIHVMPDTPDILLSRVNQITLSDKLYKAGWEEEKKKGYDLRPDAISIKAARASRDIASDYKYKQAYEQAKGKHIGFRSLEDDPKLVHFMQVAKMQSDREYKKAYEKSKTSFHTPVDMLSVVAAKKSQEVATNANYRNVIHTYNMLPDAMSFELAKNMMQLQSDNQYKADYADFMKGIGWLPLGSLEAEKNKKAMEIISEKKYRQHPDTLKYSTLMDSMNMVLAKNNAKIMNEHLYKQAWEADKTKVHIMPDIPQIILAKANAVNMSDKLYKLSLEESKKKGYDLRTDAISIQAAKASRDIASDYKYKHSYEKERGKMVGFRSLEDDPKLVHSMQVAKMQSDREYKKSYEKTKTSYHTPADMLSVTAARDAQANITNTNYKHLIHKYILLPDAMNIQLSKNMNHIQSDNEYKQDYNECYKGLGWSPAGSLEVEKAKKATEYASDQKYRQHPSNFQFQKLNDSMDMVLAKQNAHTMNKYLYTADWNKDKTKIHVMPDTPDILQAKQNQTLFSQKLYKLGWEEALKKGYDLPVDAISVQLAKVSRDNASDFKYKQGYRKQLGHHIGFRNLQDDPKLVLSMNVAKMQSEREYKKDFEKWKTKFTSPVDMLGVVLAKKCQALVSDVDYKNYLHQWTCLPDQNDVIQAKRSYELQSENLYKSDLEWLRGIGWSPLGSLEAEKNKRASEIISEKKYRQPPDRNKFTSIPDAMDIVLAKTNAKNRSDRLYREAWDKDKTQVHIMPDTPDIILAKANLINSSDKLYRMGYEELKKKGYDLPVDAIPIKAAKASREIASEYKYKDGYRKQLGHHIGARNIEDDPKMMWSMHVAKIQSDREYKKDFEKWKTKFSSPVDMLGLVQAKKCQILVSDVDYKNYLHQWTCLPDQNDVIHARQAYDLQSDNIYKSDLQWLKGIGWVPIGSVDVVKCKRAAEILSDHIYRQPPDKLKFTSVPDSLEQVLAKNNAINMNKRLYTEAWDKDKTQIHIMPDTPEIMLARQNKINYSESLYRQAMEEAKKEGYDLRSDAIPIVAAKASRDIASDYKYKEAYRKQLGHHIGARAVHDDPKMMWSLHVAKMQSDREYKKDFEKYKTRFSSPVDMLGIVLAKKCQTLVSDVDYKHPLHEWTCLPDQNDIIHARKAYDLQSDNLYKSDLEWMKGIGWIPLGSVEVVKAKRAGEILSDNIYRQRPDTLKFTSVTDSPELVLAKNNALNMNKRLYTEAWDNDKKTIHVMPDTPEIMLAKLNRINYSDKLYRLALEESKKEGCDLRVDAIPIQAAKASREIASDYKYKEAYRKQLGHHIGARNIEDDPKMMWSIHAAKIQSDREYKKDFEKWKTRFSSPVDMLGLVQAKKCQILVSDIDYKHPLHEWICLPDQNDIIQARKAYDLQSDAIYKADLEWLRGIGWVPLGSVEVEKVKRAGEILSERKYRQPADQLKFTCITDTPEIVLAKNNALTMSKHLYTEAWDTDKTSIHVMPDTPEILLAKSNSANISQKLYTKGWDESKMKDYDLKADAISIKSAKASRDIASDYKYKEAYEKQKGHHIGAQSVEDDPKIMCAIHAGKIQSEREYKKDFQKWKTKFTSPVDMLGILLAKKCQTLVSDIDYRNYLHHWTCLPDQNDIIQARKAYELQSDNVYKTDLEWLRGIGWMPEGSVEMNRVKNAQDLVNERRYRTRPEALKFTSVVDTPEVVLAKANSLQMSEKLYQEAWNKDKTNISLPSDTPLILQAHINAMQISNKLYQKDWDEAKQKGYDLRADAIEIKHAKASREIASEYKYKEGYRKQLGHHVGFRTLQDDPKLVWSIHAAKIQSEREYKKAYEKSKGIHNTPLDMMSIVQAKKCQVLVSDIDYRNYLHQWTCLPDQNDVIQAKKAYELQSDNVYKSDLEWLKGIGWLPEGSVEVMRVKNAQKLLNERLYRIRPEALKFTSIVDTPEVILAKINSVQISEPLYRDAWDKEKANVNIPADTPLMLQSKINAMQISNKQYQQAWEDVKMTGYDLRADAIGIQHAKASRDIASDYLYKTAYEKQKGHYIGCRSAKEDPKLVWAANVMKMQNDRLYKKAYNDHKARITIPVDMVSINAAKEGQALASDVDYRQYLHQWSCFPDQNDVIQARKAYDLQSDALYKADLEWLRGIGWMPQGSPEVLRVKNAQEILRDSVYRTPVVKLKYTSIVDTPEVVLAKSNAENISIPKYREVWDKDKTSVHIMPDTPEINLARANALNVSNKIYREGWDEMKMSCDVRLDAIPIQAAKASREIASDYKYKLDHEKQKGHYVGTLTARDDNKIRWALIAGKIQNEREYRLHWAKWKSKFQSPADMLSITHSKNCQALVSDIDYRNYLHQWTCLPDQHDVIQARKAYDLQSDAIYKADLEWLRGIGWMPSDSVSVNHAKHAADIFSEPDVHFSKYPYLYKESWEKQKATGYILPPDAVPFVHAHHSSDVQSELKYKADHVKQKGHYVGVPTMRDDPKLVWFEHAGQIQNDRLYKEHYHKTKAKINIPPDMVSVVAAKEGQILVSDIDYRNYLHQWTCHPDQNDVIQARKAYDLQSDNVYKADLEWLRGIGWIPLDSVDHVRVTRNQEMVNQIKYKKDALANYPNFTSVVDPPAVVLAKINSVNQSDVKYKETFNKLLKGKYIFSPDTPYITHSKDMGKLYSTILYKGAWEGTKAYGYTLDERYIPIVGAKHADFVNSELKYKETYEKQKGHYLAGKEISEFPNVVHCLDFQKMRSVLNYRRHYEDTKANVHIPNDMMNHVLAKRCQYILSDLEYRHYFHQWTSLPEEPNVIRARNAQEILSDNVYKDDLNWLKGIGCYVWDTPQILHAKKSYDLQSQILYTADGKENLKNYNMVTDTPLYVTALQSGINASEVKYKENYHQIKDKYTTVLETVDYDRTRNLKDLYSSNVYKEAWDKVKATSYILPSNTVSLTHAKNQKHLASHIKYREEYEKFKALYTLPKSVDDDPNTARCLRVGKFNIDRLYRSVYEKNKMKIHMVPDMVEMVTAKDSQKKVSEIDYRLHLHEWICHPDLQVNSHVRKVTDQISDIVYKDDLNWLKGIGCYVWDTPEILHAKHAYDLRNDIKYQAHVKKTRNNYKLVTDTPLYVQAVKSGKQLSDAVYHYDYVHSVRGKVAPTTKTVDLDRALHAYKLQSENLYRKDGLNSLPTGYRLPGDTPHFKHNKDIRYMSSYFKYKEVYEHFKANGYTLGPKDVPFVHVRRVNNVTSERLYRQLYHKLKDKIHTTPDTPEIRQVKKTQEAVSELIYKSDFFKMQGHMISMPYTPHVLHCRYVGDITSDIKYKEDLQILRGLGCFLYDTPDMVRSRHLRKLWSNYLYTDNARKMRDKYKVVLDTPEYRKVQELKTHLSELVYRAAGKKQKSIFTSVPDTPDLLRAKRGQKLQSQYLYVELATKERPHHHAGNQTTALKHARDVKDMVSEKKYKVQYEKMKDKYTPVPDTPILIRAKKAYWNASDLRYKETFQKTKGKYHTVKDALDIVYHRKVTDHISKIKYKENYMSQLGIWRSIPDRPEHFHHRAVTDAVSDVKYKEDLTWLKGIGCYAYDTPDFTLAEKNKTLYSKYKYKEVFERTKSDFKYEADCPINRHFKFATQLMNERKYKSSAKMLLKQGCNEILRPDMLTALYNTHMWSQIKYRKNYEKTKDKFTSVVDTPEHLRTTKVNKQISDILYKLEYNKAKPRGYTTIHDTPMLLHVRKVKDEVSDLKYKEVYQRTKSNCTIEPDAVHIKAAKDAYKVNTNLDYKKQYEANKAHWRWTPDRPDFIQAAKSSLQQSDFEYKLDREFLKGCKLSVTDDKDMVLALRNSVIESDLKYKEKHVKERGTCHAVPDTPQILLAKTVSNLVSENKYKRHVKKHLAQGSYTTLPETRDTVHVKEVTKHVSDTNYKKKFVKERGKSNYSIMLEPPEVKHAMEVAKKQSDVAYKKDAKENLHYTTVADRPDIKKATQAAKQASEVEYRAKHRKEGSHGLSMLGRPDIEMAKKAATLSSQVKYRENFNKEKGKTPKYNPKESQLYKIMKDANNLASEVKYKADLKKLHKPVTDMKESLIMNHVLNTSHLASSYQYKKNYEKSKGHYHTIPDNLEQLHLKEATELQSIVKYKEKYEKERGKPMLDFETPTYITAKESQQMQSGKEYRKDYEESIKGRNLTGLEVTPALLHVKYATKIASEKEYRKDLEESIRGKGLSEMEDTPDMLRAKNATQILNEKEYKRDLELEVKGRGLNAMANETPDFMRARNATDIASQIKYKQLAEMEKANFTSVVDTPEIIHAQQVKNLSSQKKYKEDAEKCMSYYETVLDTPEMQRVRENQKNFSLLQYQCDLKNSKGKITVVQDTPEILRVKENQKNFSSVLYKEDVSPGTAIGKTPEMMRVKQTQDHISSVKYKETIGQGTPIPDLPEVKRVKETQKHISSVGAPPALCPSCPSPPVSLVMYKENLGTGIPTPVTPEIERVKRNQENFSSILYKENLSKGTPLPVTPEMERVKRNQENFSSVLYKENMGKGTPLPVTPEMERVKHNQENISSILYKENVGKGTPTPVTPEMQRVKRNQENISSVIYKENLGKATPTPFTPEMERVKRNQENFSSVLYKENMRKATPTPVTPEMERAKRNQENISSVLYSDSFRKQIQGKAAYVLDTPEMRRVRETQRHISTVKYHEDFEKHKGCFTPVVTDPITERVKKNTQDFSDINYRGIQRKVVEMEQKRNDQDQETITGLRVWRTNPGSVFDYDPAEDNIQSRSLHMLNAQAQRRSREQSRSASALSISGGEEKSEHSEAARLSTYSDGGVFFSATSAAYKHAKTTELPQQRSSSVATQQTTVSSIPSHPSTAGKIFRAMYDYMAADADEVSFRDGDAIVNVQAIDEGWMYGTVQRTGRTGMLPANYVEAI", "length": 5549, "header": "tr|A0A287BN18-1|A0A287BN18_PIG Computationally mapped isoform of Nebulin OS=Sus scrofa OX=9823 GN=NEB PE=1 SV=3 CANONICAL=A0A287B5G8-1" }, "locus": { "chromosome": "15", "start_pos": 765584, "end_pos": 596710, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043052.3", "url": "https://www.ensembl.org/id/ENSSSCT00000043052.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057830.3", "url": "https://www.ensembl.org/id/ENSSSCP00000057830.3" } ] } }, { "isoform_ac": "A0A287BPU2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BPU2/entry", "sequence": { "sequence": "MIAVQYKKDYEKAKGKMVGFQSLQDDPKLVHYMNVAKIQSDREYKKDYEKTKTKYNTPHDMFNVVAAKKAQDVASNVNYRHSLHHYTYLPDAMDLELSKNMMHIQSDNAYKEDYNTWMKGIGWIPLGSLEVEKVKKAGDALNEKKYRQHPDTLKFTSIVDSPVMVQAKQNTRQVSDILYKAKGEDVKHKYTMGPDLPQFLQAKCNAYNISDVCYKRDWHDLIAKGNNVLGDAIPITAAKASRNIASDYKYKEAYEKAKGKHVGFRSLQDDPKLVHYMNVAKLQSDREYKKNYENTKTSYHTPGDMVSITAAKMAQDVATNVNYKQPIHHYTYLPDALSLEHTRNVNQIQSDNVYKDEYNHFFKGIGWIPLGSLEVEKVKKAGDALNERKYRQHPDTIKFTSVPDSMGMVLAQHNTKQLSDLNYKVEGEKLKHKYTMDPDVPQFIQAKVNAINMSDAHYKADWKKTLAKGYDLTPDAIPIVAAKSSRNIASDFKYKEAYEKAKGKQVGFRSLQDDPKLVHYMNVAKIQSDREYKKGYEASKTRYHTPLDMLSVTAAKKSQEVATNTNYKQPFHHYTLLPDALNVEHSRNAMQIQSDNLYKSDFTNWMKGIGWIPMESLEVEKAKKAGEILSEKKYRQHPEKLKFTYAMDTMEQALNKSNKLIMDKRLYTEKWNKDKTTIHVMPDTPDILLSRVNQITLSDKLYKAGWEEEKKKGYDLRPDAISIKAARASRDIASDYKYKQAYEQAKGKHIGFRSLEDDPKLVHFMQVAKMQSDREYKKAYEKSKTSFHTPVDMLSVVAAKKSQEVATNANYRNVIHTYNMLPDAMSFELAKNMMQLQSDNQYKADYADFMKGIGWLPLGSLEAEKNKKAMEIISEKKYRQHPDTLKYSTLMDSMNMVLAKNNAKIMNEHLYKQAWEADKTKVHIMPDIPQIILAKANAVNMSDKLYKLSLEESKKKGYDLRTDAISIQAAKASRDIASDYKYKHSYEKERGKMVGFRSLEDDPKLVHSMQVAKMQSDREYKKSYEKTKTSYHTPADMLSVTAARDAQANITNTNYKHLIHKYILLPDAMNIQLSKNMNHIQSDNEYKQDYNECYKGLGWSPAGSLEVEKAKKATEYASDQKYRQHPSNFQFQKLNDSMDMVLAKQNAHTMNKYLYTADWNKDKTKIHVMPDTPDILQAKQNQTLFSQKLYKLGWEEALKKGYDLPVDAISVQLAKVSRDNASDFKYKQGYRKQLGHHIGFRNLQDDPKLVLSMNVAKMQSEREYKKDFEKWKTKFTSPVDMLGVVLAKKCQALVSDVDYKNYLHQWTCLPDQNDVIQAKRSYELQSENLYKSDLEWLRGIGWSPLGSLEAEKNKRASEIISEKKYRQPPDRNKFTSIPDAMDIVLAKTNAKNRSDRLYREAWDKDKTQVHIMPDTPDIILAKANLINSSDKLYRMGYEELKKKGYDLPVDAIPIKAAKASREIASEYKYKDGYRKQLGHHIGARNIEDDPKMMWSMHVAKIQSDREYKKDFEKWKTKFSSPVDMLGLVQAKKCQILVSDVDYKNYLHQWTCLPDQNDVIHARQAYDLQSDNIYKSDLQWLKGIGWVPIGSVDVVKCKRAAEILSDHIYRQPPDKLKFTSVPDSLEQVLAKNNAINMNKRLYTEAWDKDKTQIHIMPDTPEIMLARQNKINYSESLYRQAMEEAKKEGYDLRSDAIPIVAAKASRDIASDYKYKEAYRKQLGHHIGARAVHDDPKMMWSLHVAKMQSDREYKKDFEKYKTRFSSPVDMLGIVLAKKCQTLVSDVDYKHPLHEWTCLPDQNDIIHARKAYDLQSDNLYKSDLEWMKGIGWIPLGSVEVVKAKRAGEILSDNIYRQRPDTLKFTSVTDSPELVLAKNNALNMNKRLYTEAWDNDKKTIHVMPDTPEIMLAKLNRINYSDKLYRLALEESKKEGCDLRVDAIPIQAAKASREIASDYKYKEAYRKQLGHHIGARNIEDDPKMMWSIHAAKIQSDREYKKDFEKWKTRFSSPVDMLGLVQAKKCQILVSDIDYKHPLHEWICLPDQNDIIQARKAYDLQSDAIYKADLEWLRGIGWVPLGSVEVEKVKRAGEILSERKYRQPADQLKFTCITDTPEIVLAKNNALTMSKHLYTEAWDTDKTSIHVMPDTPEILLAKSNSANISQKLYTKGWDESKMKDYDLKADAISIKSAKASRDIASDYKYKEAYEKQKGHHIGAQSVEDDPKIMCAIHAGKIQSEREYKKDFQKWKTKFTSPVDMLGILLAKKCQTLVSDIDYRNYLHHWTCLPDQNDIIQARKAYELQSDNVYKTDLEWLRGIGWMPEGSVEMNRVKNAQDLVNERRYRTRPEALKFTSVVDTPEVVLAKANSLQMSEKLYQEAWNKDKTNISLPSDTPLILQAHINAMQISNKLYQKDWDEAKQKGYDLRADAIEIKHAKASREIASEYKYKEGYRKQLGHHVGFRTLQDDPKLVWSIHAAKIQSEREYKKAYEKSKGIHNTPLDMMSIVQAKKCQVLVSDIDYRNYLHQWTCLPDQNDVIQAKKAYELQSDNVYKSDLEWLKGIGWLPEGSVEVMRVKNAQKLLNERLYRIRPEALKFTSIVDTPEVILAKINSVQISEPLYRDAWDKEKANVNIPADTPLMLQSKINAMQISNKQYQQAWEDVKMTGYDLRADAIGIQHAKASRDIASDYLYKTAYEKQKGHYIGCRSAKEDPKLVWAANVMKMQNDRLYKKAYNDHKARITIPVDMVSINAAKEGQALASDVDYRQYLHQWSCFPDQNDVIQARKAYDLQSDALYKADLEWLRGIGWMPQGSPEVLRVKNAQEILRDSVYRTPVVKLKYTSIVDTPEVVLAKSNAENISIPKYREVWDKDKTSVHIMPDTPEINLARANALNVSNKIYREGWDEMKMSCDVRLDAIPIQAAKASREIASDYKYKLDHEKQKGHYVGTLTARDDNKIRWALIAGKIQNEREYRLHWAKWKSKFQSPADMLSITHSKNCQALVSDIDYRNYLHQWTCLPDQHDVIQARKAYDLQSDAIYKADLEWLRGIGWMPSDSVSVNHAKHAADIFSEPDVHFSKYPYLYKESWEKQKATGYILPPDAVPFVHAHHSSDVQSELKYKADHVKQKGHYVGVPTMRDDPKLVWFEHAGQIQNDRLYKEHYHKTKAKINIPPDMVSVVAAKEGQILVSDIDYRNYLHQWTCHPDQNDVIQARKAYDLQSDNVYKADLEWLRGIGWIPLDSVDHVRVTRNQEMVNQIKYKKDALANYPNFTSVVDPPAVVLAKINSVNQSDVKYKETFNKLLKGKYIFSPDTPYITHSKDMGKLYSTILYKGAWEGTKAYGYTLDERYIPIVGAKHADFVNSELKYKETYEKQKGHYLAGKEISEFPNVVHCLDFQKMRSVLNYRRHYEDTKANVHIPNDMMNHVLAKRCQYILSDLEYRHYFHQWTSLPEEPNVIRARNAQEILSDNVYKDDLNWLKGIGCYVWDTPQILHAKKSYDLQSQILYTADGKENLKNYNMVTDTPLYVTALQSGINASEVKYKENYHQIKDKYTTVLETVDYDRTRNLKDLYSSNVYKEAWDKVKATSYILPSNTVSLTHAKNQKHLASHIKYREEYEKFKALYTLPKSVDDDPNTARCLRVGKFNIDRLYRSVYEKNKMKIHMVPDMVEMVTAKDSQKKVSEIDYRLHLHEWICHPDLQVNSHVRKVTDQISDIVYKDDLNWLKGIGCYVWDTPEILHAKHAYDLRNDIKYQAHVKKTRNNYKLVTDTPLYVQAVKSGKQLSDAVYHYDYVHSVRGKVAPTTKTVDLDRALHAYKLQSENLYRKDGLNSLPTGYRLPGDTPHFKHNKDIRYMSSYFKYKEVYEHFKANGYTLGPKDVPFVHVRRVNNVTSERLYRQLYHKLKDKIHTTPDTPEIRQVKKTQEAVSELIYKSDFFKMQGHMISMPYTPHVLHCRYVGDITSDIKYKEDLQILRGLGCFLYDTPDMVRSRHLRKLWSNYLYTDNARKMRDKYKVVLDTPEYRKVQELKTHLSELVYRAAGKKQKSIFTSVPDTPDLLRAKRGQKLQSQYLYVELATKERPHHHAGNQTTALKHARDVKDMVSEKKYKVQYEKMKDKYTPVPDTPILIRAKKAYWNASDLRYKETFQKTKGKYHTVKDALDIVYHRKVTDHISKIKYKENYMSQLGIWRSIPDRPEHFHHRAVTDAVSDVKYKEDLTWLKGIGCYAYDTPDFTLAEKNKTLYSKYKYKEVFERTKSDFKYEADCPINRHFKFATQLMNERKYKSSAKMLLKQGCNEILRPDMLTALYNTHMWSQIKYRKNYEKTKDKFTSVVDTPEHLRTTKVNKQISDILYKLEYNKAKPRGYTTIHDTPMLLHVRKVKDEVSDLKYKEVYQRTKSNCTIEPDAVHIKAAKDAYKVNTNLDYKKQYEANKAHWRWTPDRPDFIQAAKSSLQQSDFEYKLDREFLKGCKLSVTDDKDMVLALRNSVIESDLKYKEKHVKERGTCHAVPDTPQILLAKTVSNLVSENKYKRHVKKHLAQGSYTTLPETRDTVHVKEVTKHVSDTNYKKKFVKERGKSNYSIMLEPPEVKHAMEVAKKQSDVAYKKDAKENLHYTTVADRPDIKKATQAAKQASEVEYRAKHRKEGSHGLSMLGRPDIEMAKKAATLSSQVKYRENFNKEKGKTPKYNPKESQLYKIMKDANNLASEVKYKADLKKLHKPVTDMKESLIMNHVLNTSHLASSYQYKKNYEKSKGHYHTIPDNLEQLHLKEATELQSIVKYKEKYEKERGKPMLDFETPTYITAKESQQMQSGKEYRKDYEESIKGRNLTGLEVTPALLHVKYATKIASEKEYRKDLEESIRGKGLSEMEDTPDMLRAKNATQILNEKEYKRDLELEVKGRGLNAMANETPDFMRARNATDIASQIKYKQLAEMEKANFTSVVDTPEIIHAQQVKNLSSQKKYKEDAEKCMSYYETVLDTPEMQRVRENQKNFSLLQYQCDLKNSKGKITVVQDTPEILRVKENQKNFSSVLYKEDVSPGTAIGKTPEMMRVKQTQDHISSVKYKETIGQGTPIPDLPEVKRVKETQKHISSVMYKENLGTGIPTPVTPEIERVKRNQENFSSVLYKENLGKGTPTPITPEMERVKRNQENFSSVFLRGIHEVVGSILYKENLSKGTPLPVTPEMERVKRNQENFSSVFGRESCTHSPPPPFDSNEFHSSYNSPLKPLIENLGKGIPIPMTPEMERVKHNQENFSSVLYSDSFRKQIQGKAAYVLDTPEMRRVRETQRHISTVKYHEDFEKHKGCFTPVVTDPITERVKKNTQDFSDINYRGIQRKVVEMEQKRNDQDQETITGLRVWRTNPGSVFDYDPAEDNIQSRSLHMLNAQAQRRSREQSRSASALSISGGEEKSEHSEAARLSTYSDGGVFFSATSAAYKHAKTTELPQQRSSSVATQQTTVSSIPSHPSTAGKIFRAMYDYMAADADEVSFRDGDAIVNVQAIDEGWMYGTVQRTGRTGMLPANYVEAI", "length": 5509, "header": "tr|A0A287BPU2-1|A0A287BPU2_PIG Computationally mapped isoform of Nebulin OS=Sus scrofa OX=9823 GN=NEB PE=1 SV=3 CANONICAL=A0A287B5G8-1" }, "locus": { "chromosome": "15", "start_pos": 765584, "end_pos": 596710, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059433.3", "url": "https://www.ensembl.org/id/ENSSSCT00000059433.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058531.3", "url": "https://www.ensembl.org/id/ENSSSCP00000058531.3" } ] } }, { "isoform_ac": "F1SHX0-1", "url": "https://www.uniprot.org/uniprotkb/F1SHX0/entry", "sequence": { "sequence": "MCIKLRYHSVYFHNGAVIFWHNHMSNFQTITEVYETTTTRTSGYEQSDTSQPAVAQPMPSKPVERKKVIRKKVDPSKFMTPYIAHSQKMQDLFSTNKYKKNYEKAKGKPYAITTDTPELRRIKKVQDQLSEVKYRIDGDVAKTICHVDEKAKDIEHAKKVSQQVSKVLYKQNWEDTKDKYLLPPDAPELVQAIKNTAMFSKKLYTEDWEADKSLFYPYNDSPELRRVAQAQKALSDIAYKKGHAEQQTQFTSLPDPPDIEFAKKVTNQVSKQKYKEDYENKIKGKWSETPCFEIATARMNAKNISTRKYQEDFENMKDQIYFMQTETPEYKVNKQAGTAASKVKYKEDYEKNKGKADYNVLPASENPLLRHLKAAGDALSDKRYKENYEKTKAKSINYCETPKFKLDTVLHNFSSDTKYKDSYLKNILGHYVGSFEDPYHTHCMKVAAENSDKNYKAEYEEDRGKGFFPQTITQEYEAIKKLDQCKDHTYKVHPDKTKFTQVTDSPVLVQAQVNSKQLSDLNYKAKHENEKFKCHIPPDTPAFIQHKVNAYNLSDNVYKHDWEKTKAKKFDIKVDAIPLLAAKANTKNTSDVMYKKDYEKSKGKMIGALSINDDPKMLHSLKTAKNQSDRLYKENYEKTKAKSMNYCETPKYQLDTLLKNFSEAKYKDSYVQNVLGHYIGSFEDPYQLHCMKVSAQNSDKNYKAEYEEDKGKCYFPQTITQEYEAIKKLDQCKDHTYKVHPDKTKFTAVTDTPVLLQAQLNTKQLSDLNYKAKHEGEKFKCNIPADAPQFIQHRVNAYNLSDNVYKHDWEKTKAKKFDIKVDAIPLLAAKANTKNTSDVMYKKDYEKSKGKMIGALSINDDPKMLHSLKTAKNQSDREYRKDYEKSKTIYTAPLDMLQVTQAKKSQAIASDVDYKHLLHNYSYPPDSINVDLAKKAYALQSDVEYKADYNSWMKGCGWIPFGSLEMEKAKRASDILNEKKYRQHPETLKFTSIEDAPIIVQSKINQAQRSDIAYKAKGEEIIHKYMNAYNISESMYKADLKDLSKKGYDLRTDAIPIKAAKAARQAASDVQYKKDYEKAKGKMVGFQSLQDDPKLVHYMNVAKIQSDREYKKDYEKTKTKYNTPHDMFNVVAAKKAQDVASNVNYRHSLHHYTYLPDAMDLELSKNMMHIQSDNAYKEDYNTWMKGIGWIPLGSLEVEKVKKAGDALNEKKYRQHPDTLKFTSIVDSPVMVQAKQNTRQVSDILYKAKGEDVKHKYTMGPDLPQFLQAKCNAYNISDVCYKRDWHDLIAKGNNVLGDAIPITAAKASRNIASDYKYKEAYEKAKGKHVGFRSLQDDPKLVHYMNVAKLQSDREYKKNYENTKTSYHTPGDMVSITAAKMAQDVATNVNYKQPIHHYTYLPDALSLEHTRNVNQIQSDNVYKDEYNHFFKGIGWIPLGSLEVEKVKKAGDALNERKYRQHPDTIKFTSVPDSMGMVLAQHNTKQLSDLNYKVEGEKLKHKYTMDPDVPQFIQAKVNAINMSDAHYKADWKKTLAKGYDLTPDAIPIVAAKSSRNIASDFKYKEAYEKAKGKQVGFRSLQDDPKLVHYMNVAKIQSDREYKKGYEASKTRYHTPLDMLSVTAAKKSQEVATNTNYKQPFHHYTLLPDALNVEHSRNAMQIQSDNLYKSDFTNWMKGIGWIPMESLEVEKAKKAGEILSEKKYRQHPEKLKFTYAMDTMEQALNKSNKLIMDKRLYTEKWNKDKTTIHVMPDTPDILLSRVNQITLSDKLYKAGWEEEKKKGYDLRPDAISIKAARASRDIASDYKYKQAYEQAKGKHIGFRSLEDDPKLVHFMQVAKMQSDREYKKAYEKSKTSFHTPVDMLSVVAAKKSQEVATNANYRNVIHTYNMLPDAMSFELAKNMMQLQSDNQYKADYADFMKGIGWLPLGSLEAEKNKKAMEIISEKKYRQHPDTLKYSTLMDSMNMVLAKNNAKIMNEHLYKQAWEADKTKVHIMPDIPQIILAKANAVNMSDKLYKLSLEESKKKGYDLRTDAISIQAAKASRDIASDYKYKHSYEKERGKMVGFRSLEDDPKLVHSMQVAKMQSDREYKKSYEKTKTSYHTPADMLSVTAARDAQANITNTNYKHLIHKYILLPDAMNIQLSKNMNHIQSDNEYKQDYNECYKGLGWSPAGSLEVEKAKKATEYASDQKYRQHPSNFQFQKLNDSMDMVLAKQNAHTMNKYLYTADWNKDKTKIHVMPDTPDILQAKQNQTLFSQKLYKLGWEEALKKGYDLPVDAISVQLAKVSRDNASDFKYKQGYRKQLGHHIGFRNLQDDPKLVLSMNVAKMQSEREYKKDFEKWKTKFTSPVDMLGVVLAKKCQALVSDVDYKNYLHQWTCLPDQNDVIQAKRSYELQSENLYKSDLEWLRGIGWSPLGSLEAEKNKRASEIISEKKYRQPPDRNKFTSIPDAMDIVLAKTNAKNRSDRLYREAWDKDKTQVHIMPDTPDIILAKANLINSSDKLYRMGYEELKKKGYDLPVDAIPIKAAKASREIASEYKYKEGFRKQLGHHVGARNIEDDPKMMWSMHVAKIQSDREYKKDFEKWKTKFSSPVDMLGVVLAKKCQTLVSDIDYKNYLHQWTCLPDQSDVIHARRAYDLQSDNLYKSDLQWLKGIGWLPSGSLEDEKNKRATQILSDHVYRQHPDKFKFSSLMDSIPMVLAKNNAITMNHRLYTEAWDKDKTTVHIMPDTPEVLLAKQNKINYSEKLYKLGLEEAKRKGYDMRLDAIPIRAAKASRDIASEFKYKEGYRKQLGHHIGARAIHDDPKMMWSMHVAKVQSDREYKKDFEKWKTKFSSPVDMLGVVLAKKCQTLVSDIDYKNYLHQWTCLPDQSDVIHARRAYDLQSDNMYKSDLQWLRGIGWVPIGSLDVEKCKRATEILSDKIYRQPPDTFKFTSVPDSLEQVLAKNNAINMNKRLYTEAWDKDKTQIHIMPDTPEIMLARMNKINYSETLYKLANEEAKKKGYDLRSDAIPIVAAKASRDIVSDYKYKDGYRKQLGHHIGARNIEDDPKMMWSMHVAKIQSDREYKKDFEKWKTKFSSPVDMLGVVLAKKCQTLVSDIDYKNYLHQWTCLDVSMNVYKSDLQWLKGIGWVPIGSVDVVKCKRAAEILSDHIYRQPPDKLKFTSVPDSLEQVLAKNNAVNMNKRLYTEAWDKDKTQIHIMPDTPEIMLARQNKINYSESLYRQAMEEAKKEGYDLRSDAIPIVAAKASRDIASDYKYKEAYRKQLGHHIGARAVHDDPKMMWSLHVAKMQSDREYKKDFEKYKTRFSSPVDMLGIVLAKKCQTLVSDVDYKHPLHEWTCLPDQNDIIHARKAYDLQSDNLYKSDLEWMKGIGWIPLGSVEVVKAKRAGEILSDNIYRQRPDTLKFTSVTDSPELVLAKNNALNMNKRLYTEAWDNDKKTIHVMPDTPEIMLAKLNRINYSDKLYRLALEESKKEGCDLRVDAIPIQAAKASREIASDYKYKEAYRKQLGHHIGARNIEDDPKMMWSIHAAKIQSDREYKKDFEKWKTRFSSPVDMLGLVQAKKCQILVSDIDYKHPLHEWICLPDQNDIIQARKAYDLQSDAIYKADLEWLRGIGWVPLGSVEVEKVKRAGEILSERKYRQPADQLKFTCITDTPEIVLAKNNALTMSKHLYTEAWDTDKTSIHVMPDTPEILLAKSNSANISQKLYTKGWDESKMKDYDLKADAISIKSAKASRDIASDYKYKEAYEKQKGHHIGAQSVEDDPKIMCAIHAGKIQSEREYKKDFQKWKTKFTSPVDMLGILLAKKCQTLVSDIDYRNYLHHWTCLPDQNDIIQARKAYELQSDALYKADLEWLRGIGWMPQGSPEVLRVKNAQEILRDSVYRTPVVKLKYTSIVDTPEVVLAKSNAENISIPKYREVWDKDKTSVHIMPDTPEINLARANALNVSNKIYREGWDEMKMSCDVRLDAIPIQAAKASREIASDYKYKLDHEKQKGHYVGTLTARDDNKIRWALIAGKIQNEREYRLHWAKWKSKFQSPADMLSITHSKNCQALVSDIDYRNYLHQWTCLPDQHDVIQARKAYDLQSDAIYKADLEWLRGIGWMPSDSVSVNHAKHAADIFSEPDVHFSKYPYLYKESWEKQKATGYILPPDAVPFVHAHHSSDVQSELKYKADHVKQKGHYVGVPTMRDDPKLVWFEHAGQIQNDRLYKEHYHKTKAKINIPPDMVSVVAAKEGQILVSDIDYRNYLHQWTCHPDQNDVIQARKAYDLQSDNVYKADLEWLRGIGWIPLDSVDHVRVTRNQEMVNQIKYKKDALANYPNFTSVVDPPAVVLAKINSVNQSDVKYKETFNKLLKGKYIFSPDTPYITHSKDMGKLYSTILYKGAWEGTKAYGYTLDERYIPIVGAKHADFVNSELKYKETYEKQKGHYLAGKEISEFPNVVHCLDFQKMRSVLNYRRHYEDTKANVHIPNDMMNHVLAKRCQYILSDLEYRHYFHQWTSLPEEPNVIRARNAQEILSDNVYKDDLNWLKGIGCYVWDTPQILHAKKSYDLQSQILYTADGKENLKNYNMVTDTPLYVTALQSGINASEVKYKENYHQIKDKYTTVLETVDYDRTRNLKDLYSSNVYKEAWDKVKATSYILPSNTVSLTHAKNQKHLASHIKYREEYEKFKALYTLPKSVDDDPNTARCLRVGKFNIDRLYRSVYEKNKMKIHMVPDMVEMVTAKDSQKKVSEIDYRLHLHEWICHPDLQVNSHVRKVTDQISDIVYKDDLNWLKGIGCYVWDTPEILHAKHAYDLRNDIKYQAHVKKTRNNYKLVTDTPLYVQAVKSGKQLSDAVYHYDYVHSVRGKVAPTTKTVDLDRALHAYKLQSENLYRKDGLNSLPTGYRLPGDTPHFKHNKDIRYMSSYFKYKEVYEHFKANGYTLGPKDVPFVHVRRVNNVTSERLYRQLYHKLKDKIHTTPDTPEIRQVKKTQEAVSELIYKSDFFKMQGHMISMPYTPHVLHCRYVGDI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"length": 6561, "header": "tr|F1SHX0-1|A0A287B5G8_PIG Computationally mapped isoform of Nebulin OS=Sus scrofa OX=9823 GN=NEB PE=1 SV=5 CANONICAL=A0A287B5G8-1" }, "locus": { "chromosome": "15", "start_pos": 765584, "end_pos": 552605, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017854.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017854.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017373.5", "url": "https://www.ensembl.org/id/ENSSSCP00000017373.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SHX0", "url": "https://www.uniprot.org/uniprotkb/F1SHX0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-390522", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-390522", "resource": "Reactome", "description": "Striated Muscle Contraction" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "actin filament binding", "id": "GO:0051015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051015", "evidence": [ { "database": "UniProtKB", "id": "A0A287B5G8", "url": "https://www.uniprot.org/uniprotkb/A0A287B5G8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "Z disc", "id": "GO:0030018", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030018", "evidence": [ { "database": "UniProtKB", "id": "A0A287B5G8", "url": "https://www.uniprot.org/uniprotkb/A0A287B5G8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "cardiac muscle thin filament assembly", "id": "GO:0071691", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071691", "evidence": [ { "database": "UniProtKB", "id": "A0A287B5G8", "url": "https://www.uniprot.org/uniprotkb/A0A287B5G8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1040, "end_pos": 1042, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1284, "end_pos": 1286, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1528, "end_pos": 1530, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1731, "end_pos": 1733, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2016, "end_pos": 2018, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2125, "end_pos": 2127, "annotation": "n_glycosylation_sequon" }, { "start_pos": 217, "end_pos": 219, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2211, "end_pos": 2213, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2257, "end_pos": 2259, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2296, "end_pos": 2298, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2468, "end_pos": 2470, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2503, "end_pos": 2505, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2746, "end_pos": 2748, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2989, "end_pos": 2991, "annotation": "n_glycosylation_sequon" }, { "start_pos": 301, "end_pos": 303, "annotation": "n_glycosylation_sequon" }, { "start_pos": 3232, "end_pos": 3234, "annotation": "n_glycosylation_sequon" }, { "start_pos": 3475, "end_pos": 3477, "annotation": "n_glycosylation_sequon" }, { "start_pos": 3718, "end_pos": 3720, "annotation": "n_glycosylation_sequon" }, { "start_pos": 3926, "end_pos": 3928, "annotation": "n_glycosylation_sequon" }, { "start_pos": 3961, "end_pos": 3963, "annotation": "n_glycosylation_sequon" }, { "start_pos": 410, "end_pos": 412, "annotation": "n_glycosylation_sequon" }, { "start_pos": 4149, "end_pos": 4151, "annotation": "n_glycosylation_sequon" }, { "start_pos": 4179, "end_pos": 4181, "annotation": "n_glycosylation_sequon" }, { "start_pos": 4393, "end_pos": 4395, "annotation": "n_glycosylation_sequon" }, { "start_pos": 4412, "end_pos": 4414, "annotation": "n_glycosylation_sequon" }, { "start_pos": 4658, "end_pos": 4660, "annotation": "n_glycosylation_sequon" }, { "start_pos": 5010, "end_pos": 5012, "annotation": "n_glycosylation_sequon" }, { "start_pos": 5207, "end_pos": 5209, "annotation": "n_glycosylation_sequon" }, { "start_pos": 5256, "end_pos": 5258, "annotation": "n_glycosylation_sequon" }, { "start_pos": 5358, "end_pos": 5360, "annotation": "n_glycosylation_sequon" }, { "start_pos": 550, "end_pos": 552, "annotation": "n_glycosylation_sequon" }, { "start_pos": 5518, "end_pos": 5520, "annotation": "n_glycosylation_sequon" }, { "start_pos": 5697, "end_pos": 5699, "annotation": "n_glycosylation_sequon" }, { "start_pos": 5853, "end_pos": 5855, "annotation": "n_glycosylation_sequon" }, { "start_pos": 586, "end_pos": 588, "annotation": "n_glycosylation_sequon" }, { "start_pos": 5945, "end_pos": 5947, "annotation": "n_glycosylation_sequon" }, { "start_pos": 5997, "end_pos": 5999, "annotation": "n_glycosylation_sequon" }, { "start_pos": 6025, "end_pos": 6027, "annotation": "n_glycosylation_sequon" }, { "start_pos": 6035, "end_pos": 6037, "annotation": "n_glycosylation_sequon" }, { "start_pos": 6055, "end_pos": 6057, "annotation": "n_glycosylation_sequon" }, { "start_pos": 6073, "end_pos": 6075, "annotation": "n_glycosylation_sequon" }, { "start_pos": 6109, "end_pos": 6111, "annotation": "n_glycosylation_sequon" }, { "start_pos": 6144, "end_pos": 6146, "annotation": "n_glycosylation_sequon" }, { "start_pos": 6237, "end_pos": 6239, "annotation": "n_glycosylation_sequon" }, { "start_pos": 624, "end_pos": 626, "annotation": "n_glycosylation_sequon" }, { "start_pos": 6268, "end_pos": 6270, "annotation": "n_glycosylation_sequon" }, { "start_pos": 6299, "end_pos": 6301, "annotation": "n_glycosylation_sequon" }, { "start_pos": 6330, "end_pos": 6332, "annotation": "n_glycosylation_sequon" }, { "start_pos": 6361, "end_pos": 6363, "annotation": "n_glycosylation_sequon" }, { "start_pos": 6392, "end_pos": 6394, "annotation": "n_glycosylation_sequon" }, { "start_pos": 658, "end_pos": 660, "annotation": "n_glycosylation_sequon" }, { "start_pos": 797, "end_pos": 799, "annotation": "n_glycosylation_sequon" }, { "start_pos": 833, "end_pos": 835, "annotation": "n_glycosylation_sequon" }, { "start_pos": 871, 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OX=9823 GN=MARCHF1 PE=4 SV=1 CANONICAL=A0A287B9N7-1" }, "locus": { "chromosome": "8", "start_pos": 52472493, "end_pos": 52379343, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069298.1", "url": "https://www.ensembl.org/id/ENSSSCT00000069298.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060306.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060306.1" } ] } }, { "isoform_ac": "A0A5G2QWM7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWM7/entry", "sequence": { "sequence": 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[], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B4P9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4P9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZC3H7A", "url": "https://www.uniprot.org/uniprotkb/A0A287B4P9", "locus": { "chromosome": "3", "start_pos": 31372799, "end_pos": 31332511, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000007895", "url": "https://www.ensembl.org/id/ENSSSCG00000007895" } ] } } ], "crossref": [ { "id": "ENSSSCG00000007895", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000007895", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100517644", "url": "https://www.ncbi.nlm.nih.gov/gene/100517644", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000571", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000571", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011990", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011990", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036855", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036855", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039691", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039691", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100517644", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517644", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ICERYMN", "url": "https://omabrowser.org/oma/group/ICERYMN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287B4P9", "url": "https://www.orthodb.org/?gene=A0A287B4P9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14928", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14928", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14928:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14928:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "XP_020942252", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020942252", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B4P9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4P9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B4P9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B4P9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RL26", "url": "https://www.uniprot.org/uniprotkb/F1RL26", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RL26-1", "url": "https://www.uniprot.org/uniprotkb/F1RL26-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSVSEERRKRQQNIQEGLQFIQSPLSYPGTQEQYAVYLGALVRNLFNEGNDVYRERDWNSSVSQYSEALSIADYAKSEEILIPKEIIEKLHINRIACYSIMGFHDKVLEDCETVLSLNASNCKALYRKSKALSDLGRYKEAYDAVAKCSLAVPQDEHVIKLTQELAQKLGFKIRKAYVRAELSLKSVPGDGAAKALNCSVEDIEPDLLTPRQEAVPVVSIPTSSFSHQVGSELASVPVMPIASVLPLPVEESSLPSTVLANGGKIPFVMPEPFLDDGDMVLGDEIDELLDSAPETNENVMPSALVRGPLSTATVTPNIPFSASLLGTLPIGARYAPAPSFSELFPPLASSLEDFCSSLKSFSMSESKRDLSTSTSREGTSLNSSNSSLLLMNGPSSLFASESFLGLSTPARNEFGNIFTSAVTKPPSSVTPRHPLEGTHELRQACQICFVKSGPKLMDFTYLANIDHKCKKDILIGRIKNVEDKSWKKIRPRPTKTNYEGPYYICKDVAAEEECRYSGHCTFAYCQEEIDVWTLERKGAFSREAFFGGNGKIHLTVFKLLQEHLGEFIFLCEKCFDHKPRMISKRNKDNSTSCSHPVTKHEFEDNKCLVHILRETTVKYSKIRSFHGQCQLDLCRHEVRYGCLREDECFYAHSLVELKVWMLQSETGISHDAIAEESKRYWQNLEANVPGAQVLGDQIMPGSLNMKIKFVCAQCLRNGQVIEPDKNRKYCSAKARHSWTKDRRAMRVMSIERKKWMNIRPLPTKKQMPLQFDLCNHIASGKKCQYVGNCSFAHSPEERDVWTYMKENGIQDMEQFYELWLKSQKNEKSDDVASQSNKDNGKQIHMPTDYAEVTVDFHCWMCRKNCNSEKQWQGHISSEKHKEKVFYTESDQYCWQHRFPTGYFSICDRYINGTCTEGSSCKFAHGNAELQEWEERRDALKMKLNKARKDHLIAPNDNDFGKYSFLFKDLN", "length": 971, "header": "tr|A0A287B4P9-1|A0A287B4P9_PIG Isoform 1 of Zinc finger CCCH-type containing 7A OS=Sus scrofa OX=9823 GN=ZC3H7A PE=4 SV=2 CANONICAL=A0A287B4P9-1" }, "isoforms": [ { "isoform_ac": "A0A287B4P9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B4P9/entry", "sequence": { "sequence": "MSSVSEERRKRQQNIQEGLQFIQSPLSYPGTQEQYAVYLGALVRNLFNEGNDVYRERDWNSSVSQYSEALSIADYAKSEEILIPKEIIEKLHINRIACYSIMGFHDKVLEDCETVLSLNASNCKALYRKSKALSDLGRYKEAYDAVAKCSLAVPQDEHVIKLTQELAQKLGFKIRKAYVRAELSLKSVPGDGAAKALNCSVEDIEPDLLTPRQEAVPVVSIPTSSFSHQVGSELASVPVMPIASVLPLPVEESSLPSTVLANGGKIPFVMPEPFLDDGDMVLGDEIDELLDSAPETNENVMPSALVRGPLSTATVTPNIPFSASLLGTLPIGARYAPAPSFSELFPPLASSLEDFCSSLKSFSMSESKRDLSTSTSREGTSLNSSNSSLLLMNGPSSLFASESFLGLSTPARNEFGNIFTSAVTKPPSSVTPRHPLEGTHELRQACQICFVKSGPKLMDFTYLANIDHKCKKDILIGRIKNVEDKSWKKIRPRPTKTNYEGPYYICKDVAAEEECRYSGHCTFAYCQEEIDVWTLERKGAFSREAFFGGNGKIHLTVFKLLQEHLGEFIFLCEKCFDHKPRMISKRNKDNSTSCSHPVTKHEFEDNKCLVHILRETTVKYSKIRSFHGQCQLDLCRHEVRYGCLREDECFYAHSLVELKVWMLQSETGISHDAIAEESKRYWQNLEANVPGAQVLGDQIMPGSLNMKIKFVCAQCLRNGQVIEPDKNRKYCSAKARHSWTKDRRAMRVMSIERKKWMNIRPLPTKKQMPLQFDLCNHIASGKKCQYVGNCSFAHSPEERDVWTYMKENGIQDMEQFYELWLKSQKNEKSDDVASQSNKDNGKQIHMPTDYAEVTVDFHCWMCRKNCNSEKQWQGHISSEKHKEKVFYTESDQYCWQHRFPTGYFSICDRYINGTCTEGSSCKFAHGNAELQEWEERRDALKMKLNKARKDHLIAPNDNDFGKYSFLFKDLN", "length": 971, "header": "tr|A0A287B4P9-1|A0A287B4P9_PIG Isoform 1 of Zinc finger CCCH-type containing 7A OS=Sus scrofa OX=9823 GN=ZC3H7A PE=4 SV=2 CANONICAL=A0A287B4P9-1" }, "locus": { "chromosome": "3", "start_pos": 31372074, "end_pos": 31344411, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062475.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062475.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051459.2", "url": "https://www.ensembl.org/id/ENSSSCP00000051459.2" } ] } }, { "isoform_ac": "F1RL26-1", "url": "https://www.uniprot.org/uniprotkb/F1RL26/entry", "sequence": { "sequence": "MSSVSEERRKRQQNIQEGLQFIQSPLSYPGTQEQYAVYLGALVRNLFNEGNDVYRERDWNSSVSQYSEALSIADYAKSEEILIPKEIIEKLHINRIACYSIMGFHDKVLEDCETVLSLNASNCKALYRKSKALSDLGRYKEAYDAVAKCSLAVPQDEHVIKLTQELAQKLGFKIRKAYVRAEALNCSVEDIEPDLLTPRQEAVPVVSIPTSSFSHQVGSELASVPVMPIASVLPLPVEESSLPSTVLANGGKIPFVMPEPFLDDGDMVLGDEIDELLDSAPETNENVMPSALVRGPLSTATVTPNIPFSASLLGTLPIGARYAPAPSFSELFPPLASSLEDFCSSLKSFSMSESKRDLSTSTSREGTSLNSSNSSLLLMNGPSSLFASESFLGLSTPARNEFGNIFTSAVTKPPSSVTPRHPLEGTHELRQACQICFVKSGPKLMDFTYLANIDHKCKKDILIGRIKNVEDKSWKKIRPRPTKTNYEGPYYICKDVAAEEECRYSGHCTFAYCQEEIDVWTLERKGAFSREAFFGGNGKIHLTVFKLLQEHLGEFIFLCEKCFDHKPRMISKRNKDNSTSCSHPVTKHEFEDNKCLVHILRETTVKYSKIRSFHGQCQLDLCRHEVRYGCLREDECFYAHSLVELKVWMLQSETGISHDAIAEESKRYWQNLEANVPGAQVLGDQIMPGSLNMKIKFVCAQCLRNGQVIEPDKNRKYCSAKARHSWTKDRRAMRVMSIERKKWMNIRPLPTKKQMPLQFDLCNHIASGKKCQYVGNCSFAHSPEERDVWTYMKENGIQDMEQFYELWLKSQKNEKSDDVASQSNKDNGKQIHMPTDYAEVTVDFHCWMCRKNCNSEKQWQGHISSEKHKEKVFYTESDQYCWQHRFPTGYFSICDRYINGTCTEGSSCKFAHGNAELQEWEERRDALKMKLNKARKDHLIAPNDNDFGKYSFLFKDLN", "length": 958, "header": "tr|F1RL26-1|A0A287B4P9_PIG Computationally mapped isoform of Zinc finger CCCH-type containing 7A OS=Sus scrofa OX=9823 GN=ZC3H7A PE=4 SV=3 CANONICAL=A0A287B4P9-1" }, "locus": { "chromosome": "3", "start_pos": 31372074, "end_pos": 31344411, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008651.4", "url": "https://www.ensembl.org/id/ENSSSCT00000008651.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008428.3", "url": "https://www.ensembl.org/id/ENSSSCP00000008428.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1RL26", "url": "https://www.uniprot.org/uniprotkb/F1RL26" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100517644", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517644", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZLR8-1", "protein_name": "Zinc finger CCCH-type containing 7A", "gene_name": "ZC3H7A", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSNVSEERSTRQQDIKKGLQFIESTLPYPGTQEQYELFIRELVRNLFNEGNDVYREGDWRGSLNHYSEAINIADYANSEEIHVSDDILEKLHVNRIACFSNMGLHEKVLEDCEIALRLNENNFRALYRKAKALNELGRYKTAYDAVAKCSLAVPQDESVIKLTQELAQKLGLKIRKAYVRAKPPSNSVSSDISTQNSSSVEDIELDLSDQKQDTVSSASSSAFVSELSKVASVPISSLSSVMSLQAEKASLPSAALANGGNVSFSMPEACLDCGDGDIIIGEELDELLDSVPDPDESVMQTTGARGPIPAGGVGPSVPFSASLLGTLPVSTGFVPPPSLSEIFSQPLASSLENFCSPLSTFSISDPKRDLSSSASRDGTPTLSSSNSPLFINGPSSLFGSENYMGISGQTRNDFSNVFSSATASIPASSALVGRNPLEGTHELRQACQLCFVKKGPKLLDYAYHPNLEHKCKKDILIGRIKNSEDKSWKKIRPRPTKTQYVGPYYICKDVAAEEECRYPGHCTFAYCQEEIDVWTLERKGAFSREALFGGNGKINFTVSRLLQEHHGFFMFLCEKCFDHKPRIISKRNKDNSSSCSHPAMHDFEDNKCLVHILRETMVKYSKIRPFQVRCQLDLCRHEVHYGCLREDKCFYAHSLVELKVWIMQKETGISHDAIVQESKKYWQNMEASAHGSQILGNQMKYGSLNLKMKFVCGQCWRNGQVNEPDRNKKYCSAKARHPWTKDRRVVLVMSNERKKWMTIRPLPAKKQVPLQFDLCNHIASGKKCQYDGNCSFAHSPEEREMWTYMKENSIQDLEQLYDIWLKSQKPEKGDDTAAQANKENGKQIHMPTDYAEVTVDFHCWMCGKNCNSEKQWQGHISSEKHKEKVFHTEDDQNCWQYRFPTGCFSICDRYMAGTCTEGNNCKFAHGNAELHEWEERRQVLRMKLSKARKDHLIAPSDNDFGKYSFLFKGLD", "length": 971 }, "evidence": [ { "id": "A0A287B4P9", "url": "https://omabrowser.org/oma/group/A0A287B4P9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D3ZP12-1", "protein_name": "Zinc finger CCCH type containing 7 A", "gene_name": "Zc3h7a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSVSEERRKRQHSIKDGLQFIQSPLSYPGTQEQYAVYLHALVRNLFNEGNDVYRECDWSGSLLQYSEALNIASYAKSEEILIPKEIIEKLQINRIACYSNMGLHDKVLEDCNAVLSVNASNCKALYRKAKALSDLRRYREAYDVVAKCSLAVPQDEHVIKLTQELAQKLGFKIRKAYVRAELSLKAVPGDGAPKAVNHSVEDIEPDLLTPRQEALSVVSLPTSSFSHVIGSELASVPIMPVTSVLQLQVDESPLPSTVFANGGKIPFTISEAFLDDDIVLGDEIDALLDSAPETNDAVMSSTLVRGPLPTASAAPGFPFRAPSLLGTLPIGARYAPEPSFAECFPPLTSPLEDFYSSLNAFSVTESTRDLSTSTAREGTALNSSNSSLLLMNGPGSLFASDNFLGITSQPSNDCGNLFGSVIAKPFSSGTPRHPLEGTHELRQACQICFVKSGPKLMDFTYHANLDHKCKKDILIGRIKNVEDKSWKKIRPRPTKTNYEGPYYICKDVAADDECRYSGHCTFAYCQEEIDVWTLERTGAFSREAFFGGNGKISLTVVKILQEHLGEFTFLCEKCFDHKPRMISKRNKDNSTACSHPVTKHEFEDNKCLVHILREATVKYSKIRSFHKQCQLDLCRHEVRYGCVREDECFYAHSLIELKVWIMQNERGISHDDIAQQSRQYWRSLEASLPGLQVLGNQIMPGLLNMEIKFVCAQCLRNGQVTEPDRNRKYCSAKAQHSWTKERRAMRAMSFERKKWMNIRPLPTKKQMPLQFDLCNHIANRKKCQYVGNCSFAHSPEEREVWTYMKDNKIHDIEQFYELWLKNQKTEKSDETSSHCSKENGKQIHMPTDYAEVTVDFHCWMCGKNCNSEKQWQDHISSEKHKEKVFHTEDDQYCWQHRFPTGYFSVCDRYMDGSCTEGSSCKFAHGNAELHEWEERRKALQMKLQKARKDHLIAPNDNDFGKYSFLFKDLK", "length": 971 }, "evidence": [ { "id": "A0A287B4P9", "url": "https://omabrowser.org/oma/group/A0A287B4P9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E9PWW6-1", "protein_name": "Zinc finger CCCH type containing 7 A", "gene_name": "Zc3h7a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSVSEERRKRQHSIKEGLQFIQSPLSYPGTQEQYAVYLHALVRNLFNEGNDIYRECDWRGSLIQYSEALSIANYAKSEEILIPTEIIEKLRINRIACYSNMGLRDEVLEDCNAVLSVNASNCKALYRKAKALSDLGHYREAYDAVAKCSLAVPQDEHVIKLTQELAQKLGFKIRKAYVRAEHLLKAVPGDGAPKAVNYSVEDIEPDLLAPRQEALSVASLPTSSFSHVIGSELASVPIMPVTSVLQLQVDESPLPSTVFANGGKIPFTISDAFLDDDIVLGDEIDALLDSAPETNDAVMSSTLVRGPLPTASAAPSLPFRTQSLLGTLPMGTRYPEPSFADFFPPLTSSLEEFYSSLNSFSVTESKRDLCTSTAREGTPLNNSNSSLLLMNGPGNLLASENFLGITSQPRNDFGNFFGSVIAKPFSSGTPRHPLEGTHELRQACQICFVKSGPKLMDFTYHANVDHKCKKDILIGRIKNVEDKSWKKIRPRPTKTNYEGPYYICKDVAADDECRYPGHCTFAYCQEEIDVWTLERKGAFSREAFFGGNGKINLTVVRILQEHHGEFTFLCEKCFDHKPRMISKRNKDNSTACSHPVTKHEFEDNKCLVHILRETTVKYSKIRSFHKQCQFDICRHEVRYGCVREDECFYAHSLIELKVWIMQSERGISHDDIAQQSKQYWRSLQASMPGVQVLGNQIMPGLLNMEIKFVCAQCLRNGQVIEPDRNRKYCSAKAQHSWTKERRAMRAMSFERKKWMNIRPLPTKKQMPLQFDLCNHIANRKKCQYVGNCSFAHSPEEREVWTYMKDNKIHDIEQFYELWLKNQKTEKSDETASHCSKENGKQIHMPTDYAEVTVDFHCWMCGKNCNSEKQWQDHISSEKHKEKVFHTEDDQYCWQHRFPTGYFSICERYINGSCTEGSSCKFAHGNAELHEWEERRKALQMKFKKARKDHLIAPNDNDFGKYSFLFKDLK", "length": 970 }, "evidence": [ { "id": "A0A287B4P9", "url": "https://omabrowser.org/oma/group/A0A287B4P9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IWR0-1", "protein_name": "Zinc finger CCCH domain-containing protein 7A", "gene_name": "ZC3H7A", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSNVSEERRKRQQNIKEGLQFIQSPLSYPGTQEQYAVYLRALVRNLFNEGNDVYREHDWNNSISQYTEALNIADYAKSEEILIPKEIIEKLYINRIACYSNMGFHDKVLEDCNIVLSLNASNCKALYRKSKALSDLGRYKKAYDAVAKCSLAVPQDEHVIKLTQELAQKLGFKIRKAYVRAELSLKSVPGDGATKALNHSVEDIEPDLLTPRQEAVPVVSLPAPSFSHEVGSELASVPVMPLTSILPLQVEESALPSAVLANGGKMPFTMPEAFLDDGDMVLGDELDDLLDSAPETNETVMPSALVRGPLQTASVSPSMPFSASLLGTLPIGARYAPPPSFSEFYPPLTSSLEDFCSSLNSFSMSESKRDLSTSTSREGTPLNNSNSSLLLMNGPGSLFASENFLGISSQPRNDFGNFFGSAVTKPSSSVTPRHPLEGTHELRQACQICFVKSGPKLMDFTYHANIDHKCKKDILIGRIKNVEDKSWKKIRPRPTKTNYEGPYYICKDVAAEEECRYSGHCTFAYCQEEIDVWTLERKGAFSREAFFGGNGKINLTVFKLLQEHLGEFIFLCEKCFDHKPRMISKRNKDNSTACSHPVTKHEFEDNKCLVHILRETTVKYSKIRSFHGQCQLDLCRHEVRYGCLREDECFYAHSLVELKVWIMQNETGISHDAIAQESKRYWQNLEANVPGAQVLGNQIMPGFLNMKIKFVCAQCLRNGQVIEPDKNRKYCSAKARHSWTKDRRAMRVMSIERKKWMNIRPLPTKKQMPLQFDLCNHIASGKKCQYVGNCSFAHSPEEREVWTYMKENGIQDMEQFYELWLKSQKNEKSEDIASQSNKENGKQIHMPTDYAEVTVDFHCWMCGKNCNSEKQWQGHISSEKHKEKVFHTEDDQYCWQHRFPTGYFSICDRYMNGTCPEGNSCKFAHGNAELHEWEERRDALKMKLNKARKDHLIGPNDNDFGKYSFLFKDLN", "length": 971 }, "evidence": [ { "id": "A0A287B4P9", "url": "https://omabrowser.org/oma/group/A0A287B4P9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4P9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4P9" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4P9", "url": "https://www.uniprot.org/uniprotkb/A0A287B4P9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4P9", "url": 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with SH3 domain, ankyrin repeat and PH domain 2", "type": "synonym", "evidence": [ { "id": "A0A287B4V4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B4V4/entry#names_and_taxonomy" } ] }, { "name": "arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform X4", "type": "synonym", "evidence": [ { "id": "XP_020943525", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020943525" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B4V4", "url": "https://www.uniprot.org/uniprotkb/A0A287B4V4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ASAP2", "url": "https://www.uniprot.org/uniprotkb/A0A287B4V4", "locus": { "chromosome": "3", "start_pos": 126920978, "end_pos": 127082932, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008642", "url": "https://www.ensembl.org/id/ENSSSCG00000008642" } ] } } ], "crossref": [ { "id": "ENSSSCG00000008642", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008642", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07642", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07642", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd08849", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd08849", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd13251", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13251", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100513350", "url": "https://www.ncbi.nlm.nih.gov/gene/100513350", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001164", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001164", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001849", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001849", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004148", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004148", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027267", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027267", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036028", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036028", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036770", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036770", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037278", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037278", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037844", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037844", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038508", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038508", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043593", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043593", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ILMKMEC", "url": "https://omabrowser.org/oma/group/ILMKMEC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR45854", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45854", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45854:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45854:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00169", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00169", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01412", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01412", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12796", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14604", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14604", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16746", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16746", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020943525", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020943525", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B4V4", "url": "https://www.uniprot.org/uniprotkb/A0A287B4V4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B4V4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B4V4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A480HIS3", "url": "https://www.uniprot.org/uniprotkb/A0A480HIS3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A480HIS3-1", "url": "https://www.uniprot.org/uniprotkb/A0A480HIS3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QVZ9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QVZ9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QVZ9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QVZ9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RAJ7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RAJ7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RAJ7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RAJ7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SA85", "url": "https://www.uniprot.org/uniprotkb/F1SA85", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SA85-1", "url": "https://www.uniprot.org/uniprotkb/F1SA85-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPDQISVSEFVAETHEDYKAPTASSFTTRTAQCRNTVAAIEEALDVDRMVLYKMKKSVKAINISGLAHVENEEQYTQALEKFGGNCVCRDDPDLGSAFLKFSVFTKELTALFKNLIQNMNNIISFPLDSLLKGDLRGVKGDLKKPFDKAWKDYETKITKIEKEKKEHAKLHGMIRTEISGAEIAEEMEKERRFFQLQMCEYLLKVNEIKIKKGVDLLQNLIKYFHAQCNFFQDGLKAVESLKPSIETLSTDLHTIKQAQDEERRQLIQLRDILKSALQVEQKEDSQLRQSTAYSLHQPQGNKEHGTERSGTLSKKSDGIRKVWQKRKCSVKNGFLTISHGTANRPPAKLNLLTCQVKTNPEEKKCFDLISHDRTYHFQAEDEQECQIWMSVLQNSKEEALNNAFKGDDTPGENNIVQELTKEIICEVQRVPGNDVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLDVLGTSELLLAKNIGNAGFNEIMECCLPAEDSVKPSPGSDMNARKDYITAKYIERKYARKKHTDNAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDSAECLKLLLRGKATISIANESGETPLDIARRLRHEHCEELLTQALSGRFNSHVHVEYEWRLLHEDLDESDDDVDEKSQPSPSRREDRPVSFYQLGSGQLQPNAVSLARDAASLAKDKQRSFVPSILQNETYGAILSSSPPPAQPAAPGTASAPPLPPRNVAKVQPASSANAPWKTDSVSVGGGSRQRSSSDPPAVHPPLPPLRVTSTNPLAPTPPPPVAKTPSVMEALSQQSKPAQAGLPPSKAPPPPLPPQPPSRLPQKRPAPGPDKAALLTSKGQPRGPGAVDLSGAEALGPLPNAVVVQPPAPMPRKSQTTKLKPKRVKALYNCVADNPDELTFSEGDVIVVDGEEDHEWWIGHLEGEPSRRGAFPVSFVHFIAD", "length": 1010, "header": "tr|A0A287B4V4-1|A0A287B4V4_PIG Isoform 1 of ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 OS=Sus scrofa OX=9823 GN=ASAP2 PE=1 SV=1 CANONICAL=A0A287B4V4-1" }, "isoforms": [ { "isoform_ac": "A0A287B4V4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B4V4/entry", "sequence": { "sequence": "MPDQISVSEFVAETHEDYKAPTASSFTTRTAQCRNTVAAIEEALDVDRMVLYKMKKSVKAINISGLAHVENEEQYTQALEKFGGNCVCRDDPDLGSAFLKFSVFTKELTALFKNLIQNMNNIISFPLDSLLKGDLRGVKGDLKKPFDKAWKDYETKITKIEKEKKEHAKLHGMIRTEISGAEIAEEMEKERRFFQLQMCEYLLKVNEIKIKKGVDLLQNLIKYFHAQCNFFQDGLKAVESLKPSIETLSTDLHTIKQAQDEERRQLIQLRDILKSALQVEQKEDSQLRQSTAYSLHQPQGNKEHGTERSGTLSKKSDGIRKVWQKRKCSVKNGFLTISHGTANRPPAKLNLLTCQVKTNPEEKKCFDLISHDRTYHFQAEDEQECQIWMSVLQNSKEEALNNAFKGDDTPGENNIVQELTKEIICEVQRVPGNDVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLDVLGTSELLLAKNIGNAGFNEIMECCLPAEDSVKPSPGSDMNARKDYITAKYIERKYARKKHTDNAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDSAECLKLLLRGKATISIANESGETPLDIARRLRHEHCEELLTQALSGRFNSHVHVEYEWRLLHEDLDESDDDVDEKSQPSPSRREDRPVSFYQLGSGQLQPNAVSLARDAASLAKDKQRSFVPSILQNETYGAILSSSPPPAQPAAPGTASAPPLPPRNVAKVQPASSANAPWKTDSVSVGGGSRQRSSSDPPAVHPPLPPLRVTSTNPLAPTPPPPVAKTPSVMEALSQQSKPAQAGLPPSKAPPPPLPPQPPSRLPQKRPAPGPDKAALLTSKGQPRGPGAVDLSGAEALGPLPNAVVVQPPAPMPRKSQTTKLKPKRVKALYNCVADNPDELTFSEGDVIVVDGEEDHEWWIGHLEGEPSRRGAFPVSFVHFIAD", "length": 1010, "header": "tr|A0A287B4V4-1|A0A287B4V4_PIG Isoform 1 of ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 OS=Sus scrofa OX=9823 GN=ASAP2 PE=1 SV=1 CANONICAL=A0A287B4V4-1" }, "locus": { "chromosome": "3", "start_pos": 127082870, "end_pos": 126923323, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043441.3", "url": "https://www.ensembl.org/id/ENSSSCT00000043441.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051142.1", "url": "https://www.ensembl.org/id/ENSSSCP00000051142.1" } ] } }, { "isoform_ac": "A0A480HIS3-1", "url": "https://www.uniprot.org/uniprotkb/A0A480HIS3/entry", "sequence": { "sequence": "MVLYKMKKSVKAINISGLAHVENEEQYTQALEKFGGNCVCRDDPDLGSAFLKFSVFTKELTALFKNLIQNMNNIISFPLDSLLKGDLRGVKGDLKKPFDKAWKDYETKITKIEKEKKEHAKLHGMIRTEISGAEIAEEMEKERRFFQLQMCEYLLKVNEIKIKKGVDLLQNLIKYFHAQCNFFQDGLKAVESLKPSIETLSTDLHTIKQAQDEERRQLIQLRDILKSALQVEQKEDSQLRQSTAYSLHQPQGNKEHGTERSGTLSKKSDGIRKVWQKRKCSVKNGFLTISHGTANRPPAKLNLLTCQVKTNPEEKKCFDLISHDRTYHFQAEDEQECQIWMSVLQNSKEEALNNAFKGDDTPGENNIVQELTKEIICEVQRVPGNDVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLDVLGTSELLLAKNIGNAGFNEIMECCLPAEDSVKPSPGSDMNARKDYITAKYIERKYARKKHTDNAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDSAECLKLLLRGKATISIANESGETPLDIARRLRHEHCEELLTQALSGRFNSHVHVEYEWRLLHEDLDESDDDVDEKSQPSPSRREDRPVSFYQLGSGQLQPNAVSLARDAASLAKDKQRSFVPSILQNETYGAILSSSPPPAQPAAPGTASAPPLPPRNVAKDPLAPTPPPPVAKTPSVMEALSQQSKPAQAGLPPSKAPPPPLPPQPPSRLPQKRPAPGPDKAALLTSKGQPRGPGAVDLSGAEALGPLPNAVVVQPPAPMPRKSQTTKLKPKRVKALYNCVADNPDELTFSEGDVIVVDGEEDHEWWIGHLEGEPSRRGAFPVSFVHFIAD", "length": 917, "header": "tr|A0A480HIS3-1|A0A480HIS3_PIG Computationally mapped isoform of ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 OS=Sus scrofa OX=9823 GN=ASAP2 PE=1 SV=1 CANONICAL=A0A287B4V4-1" }, "locus": { "chromosome": "3", "start_pos": 127027964, "end_pos": 126923323, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090665.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090665.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061076.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061076.1" } ] } }, { "isoform_ac": "A0A5G2QVZ9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QVZ9/entry", "sequence": { "sequence": "MKKSVKAINISGLAHVENEEQYTQALEKFGGNCVCRDDPDLGSAFLKFSVFTKELTALFKNLIQNMNNIISFPLDSLLKGDLRGVKGDLKKPFDKAWKDYETKITKIEKEKKEHAKLHGMIRTEISGAEIAEEMEKERRFFQLQMCEYLLKVNEIKIKKGVDLLQNLIKYFHAQCNFFQDGLKAVESLKPSIETLSTDLHTIKQAQDEERRQLIQLRDILKSALQVEQKEDSQLRQSTAYSLHQPQGNKEHGTERSGTLSKKSDGIRKVWQKRKCSVKNGFLTISHGTANRPPAKLNLLTCQVKTNPEEKKCFDLISHDRTYHFQAEDEQECQIWMSVLQNSKEEALNNAFKGDDTPGENNIVQELTKEIICEVQRVPGNDVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLDVLGTSELLLAKNIGNAGFNEIMECCLPAEDSVKPSPGSDMNARKDYITAKYIERKYARKKHTDNAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDSAECLKLLLRGKATISIANESGETPLDIARRLRHEHCEELLTQALSGRFNSHVHVEYEWRLLHEDLDESDDDVDEKSQPSPSRREDRPVSFYQLGSGQLQPNAVSLARDAASLAKDKQRSFVPSILQNETYGAILSSSPPPAQPAAPGTASAPPLPPRNVAKDPLAPTPPPPVAKTPSVMEALSQQSKPAQAGLPPSKAPPPPLPPQPPSRLPQKRPAPGPDKAALLTSKGQPRGPGAVDLSGAEALGPLPNAVVVQPPAPMPRKSQTTKLKPKRVKALYNCVADNPDELTFSEGDVIVVDGEEDHEWWIGHLEGEPSRRGAFPVSFVHFIAD", "length": 912, "header": "tr|A0A5G2QVZ9-1|A0A287B4V4_PIG Computationally mapped isoform of ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 OS=Sus scrofa OX=9823 GN=ASAP2 PE=1 SV=1 CANONICAL=A0A287B4V4-1" }, "locus": { "chromosome": "3", "start_pos": 127027949, "end_pos": 126923323, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074471.1", "url": "https://www.ensembl.org/id/ENSSSCT00000074471.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062364.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062364.1" } ] } }, { "isoform_ac": "A0A5G2RAJ7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RAJ7/entry", "sequence": { "sequence": "MRSEGTPQDRLDGPHVENEEQYTQALEKFGGNCVCRDDPDLGSAFLKFSVFTKELTALFKNLIQNMNNIISFPLDSLLKGDLRGVKGDLKKPFDKAWKDYETKITKIEKEKKEHAKLHGMIRTEISGAEIAEEMEKERRFFQLQMCEYLLKVNEIKIKKGVDLLQNLIKYFHAQCNFFQDGLKAVESLKPSIETLSTDLHTIKQAQDEERRQLIQLRDILKSALQVEQKEDSQLRQSTAYSLHQPQGNKEHGTERSGTLSKKSDGIRKVWQKRKCSVKNGFLTISHGTANRPPAKLNLLTCQVKTNPEEKKCFDLISHDRTYHFQAEDEQECQIWMSVLQNSKEEALNNAFKGDDTPGENNIVQELTKEIICEVQRVPGNDVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLDVLGTSELLLAKNIGNAGFNEIMECCLPAEDSVKPSPGSDMNARKDYITAKYIERKYARKKHTDNAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDSAECLKLLLRGKATISIANESGETPLDIARRLRHEHCEELLTQALSGRFNSHVHVEYEWRLLHEDLDESDDDVDEKSQPSPSRREDRPVSFYQLGSGQLQPNAVSLARDAASLAKDKQRSFVPSILQNETYGAILSSSPPPAQPAAPGTASAPPLPPRNVAKGGAAGPSPGVFDSRGHRVRSQGQELAPRVPSHAVQPASSANAPWKTDSVSVGGGSRQRSSSDPPAVHPPLPPLRVTSTNPLAPTPPPPVAKTPSVMEALSQQSKPAQAGLPPSKAPPPPLPPQPPSRLPQKRPAPGPDKAALLTSKGQPRGPGAVDLSGAEALGPLPNAVVVQPPAPMPRKSQTTKLKPKRVKALYNCVADNPDELTFSEGDVIVVDGEEDHEWWIGHLEGEPSRRGAFPVSFVHFIAD", "length": 990, "header": "tr|A0A5G2RAJ7-1|A0A287B4V4_PIG Computationally mapped isoform of ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 OS=Sus scrofa OX=9823 GN=ASAP2 PE=1 SV=1 CANONICAL=A0A287B4V4-1" }, "locus": { "chromosome": "3", "start_pos": 127011288, "end_pos": 126923323, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076182.1", "url": "https://www.ensembl.org/id/ENSSSCT00000076182.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073355.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073355.1" } ] } }, { "isoform_ac": "F1SA85-1", "url": "https://www.uniprot.org/uniprotkb/F1SA85/entry", "sequence": { "sequence": "GGSLGVSCHKLEAHVENEEQYTQALEKFGGNCVCRDDPDLGSAFLKFSVFTKELTALFKNLIQNMNNIISFPLDSLLKGDLRGVKGDLKKPFDKAWKDYETKITKIEKEKKEHAKLHGMIRTEISGAEIAEEMEKERRFFQLQMCEYLLKVNEIKIKKGVDLLQNLIKYFHAQCNFFQDGLKAVESLKPSIETLSTDLHTIKQAQDEERRQLIQLRDILKSALQVEQKEDSQLRQSTAYSLHQPQGNKEHGTERSGTLSKKSDGIRKVWQKRKCSVKNGFLTISHGTANRPPAKLNLLTCQVKTNPEEKKCFDLISHDRTYHFQAEDEQECQIWMSVLQNSKEEALNNAFKGDDTPGENNIVQELTKEIICEVQRVPGNDVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLDVLGTSELLLAKNIGNAGFNEIMECCLPAEDSVKPSPGSDMNARKDYITAKYIERKYARKKHTDNAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDSAECLKLLLRGKATISIANESGETPLDIARRLRHEHCEELLTQALSGRFNSHVHVEYEWRLLHEDLDESDDDVDEKSQPSPSRREDRPVSFYQLGSGQLQPNAVSLARDAASLAKDKQRSFVPSILQNETYGAILSSSPPPAQPAAPGTASAPPLPPRNVAKGGAAGPSPGVFDSRGHRVRSQGQELAPRVPSHAVQPASSANAPWKTDSVSVGGGSRQRSSSDPPAVHPPLPPLRVTSTNPLAPTPPPPVAKTPSVMEALSQQSKPAQAGLPPSKAPPPPLPPQPPSRLPQKRPAPGPDKAALLTSKGQPRGPGAVDLSGAEALGPLPNAVVVQPPAPMPRKSQTTKLKPKRVKALYNCVADNPDELTFSEGDVIVVDGEEDHEWWIGHLEGEPSRRGAFPVSFVHFIAD", "length": 989, "header": "tr|F1SA85-1|A0A287B4V4_PIG Computationally mapped isoform of ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 OS=Sus scrofa OX=9823 GN=ASAP2 PE=1 SV=5 CANONICAL=A0A287B4V4-1" }, "locus": { "chromosome": "3", "start_pos": 127005133, "end_pos": 126923323, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000009454.5", "url": "https://www.ensembl.org/id/ENSSSCT00000009454.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000009211.5", "url": "https://www.ensembl.org/id/ENSSSCP00000009211.5" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 845, "start_aa": "Thr", "end_pos": 845, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr845", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QVZ9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QVZ9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1M154-1", "protein_name": "ArfGAP with SH3 domain, ankyrin repeat and PH domain 2", "gene_name": "ASAP2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPDQISVSEFVAETHEDYKAPTASSFTTRTAQCRNTVAAIEEALDVDRMVLYKMKKSVKAINISGLAHVENEEQYTQALEKFGGNCVCRDDPDLGSAFLKFSVFTKELTALFKNLIQNMNNIISFPLDSLLKGDLKGVKGDLKKPFDKAWKDYETKITKIEKEKKEHAKLHGMIRTEISGAEIAEEMEKERRYFQLQMCEYLLKVNEIKIKKGVDLLQNLIKYFHAQCNFFQDGLKAVESLKPSIETLSTDLHTIKQAQDEERRQLIQLRDILKSALQVEQKEDLQMRQSTAYSLHQPQGNKEHGTERTGSLYKKSDGIRKVWQKRKCSVKNGFLTISHGTANRPPAKLNLLTCQVKTNPEEKKCFDLISHDRTYHFQAEDEPECQIWMSVLQNSKEEALNNAFKGDDNTGENNIVQELTKEIISEVQGMTGNDVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLDVLGTSELLLAKNIGNAGFNEIMECCLPAEDSVKPNPGSDMNARKDYITAKYIERKYARKKHADNAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDSAECLKLLLRGKASIGIANESGETPLDIAKRLRHERCEELLNQALSGRFNSHVHVEYEWRLLPEDLDESDDDMDEKLQPSPSRREDRPVSFYQLGPSQLPSSAAALARDAGSLAKDKQRGFVPSLLQNETYGAILSGSPPPTQPAAPGSSSAPPLPPRNVAKDPLAPTPPPPVAKTPSVIEALSQQSKPAQSGLPPSKAPPPLPPQPPSRLPQKRPAPGPDKSSPLINKGQPRGPAVDLSGTEALGPLSNAVVMQPPAPMPRKSQTTKLKPKRVKALYNCVADNPDELTFSEGDVIIVDGEEDQEWWIGHIDGDPSRKGAFPVSFVHFIAD", "length": 963 }, "evidence": [ { "id": "A0A287B4V4", "url": "https://omabrowser.org/oma/group/A0A287B4V4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8I6GLF1-1", "protein_name": "ArfGAP with SH3 domain, ankyrin repeat and PH domain 2", "gene_name": "Asap2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPDQISVSEFVAETHEDYKAPTASSFTTRTAQCRNTVAAIEEALDVDRMVLYKMKKSVKAINISGLAHVENEEQYTQALEKFGGNCVCRDDPDLGSAFLKFSVFTKELTALFKNLIQNMNNIISFPLDSLLKGDLKGVKGDLKKPFDKAWKDYETKITKIEKEKKEHAKLHGMIRTEISGAEIAEEMEKERRFFQLQMCEYLLKVNEIKVKKGVDLLQNLIKYFHAQCNFFQDGLKAVESLKPSIETLSTDLHTIKQAQDEERRQLIQLRDILKSALQVEQKESRRDSQLRQSTAYSLHQPQGNKEHGTERNGNLYKKSDGIRKVWQKRKCSVKNGFLTISHGTANRPPAKLNLLTCQVKTNPEEKKCFDLISHDRTYHFQAEDEQECQIWMSVLQNSKEEALNNAFKGDDNTGENNIVQELTKEIISEVQRMTGNDVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLDVLGTSELLLAKNIGNAGFNEIMECCLPPEDPVKPNPGSDMIARKDYITAKYMERRYARRKHADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLIQALSGRFNSHVHVEYEWRLLHEDLDESDDDVDEKLQPSPNRREDRPVSFYQLGSSQFQPNAVSLARDTANLTKDKQRGFGPSILQNETYGAILSGSPPSSQSVPPSTTSAPPLPPRNVGKVQAATSANTLWKTNSVGVDGISRQRSSSDLPAVHPPLPPLRVTSTNPLTTTPPPPVAKTSGTLEAINQPSKSSQPGTSQSKPPPLPPQPPSRLPQKKPASGTDKPTPLINKGQPRGPEASGPLSNAMALQPPAPMPRKSQATKSKPKRVKALYNCVADNPDELTFSEGDVIIVDGEEDQEWWIGHIDGEPSRKGAFPVSFVHFIAD", "length": 1003 }, "evidence": [ { "id": "A0A287B4V4", "url": "https://omabrowser.org/oma/group/A0A287B4V4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0X8U3-1", "protein_name": "ArfGAP with SH3 domain, ankyrin repeat and PH domain 2", "gene_name": "ASAP2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPDQISVSEFVSETNEDYKSPTASNFTTRMAQCRNTVAAIEEALDVDRNVLYKMKKSVKAINVSGLAHVENEEQYTQALEKFGGNCVCRDDPDLGTAFLKFSVFTKELTALFKNLIQNMNNIITFPLDSLLKGDLKGVKGDLKKPFDKAWKDYETKVTKIEKEKKEHAKLHGMIRTEISGAEIAEEMEKERRFFQLQMCEYLLKVNEIKIKKGVDLLQNLIKYFHAQCNFFQDGLKAVESLKPSIETLSTDLYTIKQAQDEERRQLTQLRDILKSALQVDQKESRRDSQIRQSTAYSLHQPQGNKEHGTERNGSLYKKSDGIRKVWQKRKCSVKNGFLTISHGTANRPPAKLNLLTCQVKTNPEEKKCFDLISHDRTYHFQAEDEQECQIWTSVLQNSKEEALNNAFKGDDNTGENNIVQELTKEIISEVQRMTGNDVCCDCGAQDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLDVLGTSELLLAKNIGNASFNEIMECCLPVDEMVKPNPSSDMNARKDYITAKYIERKYARKKHADNAAKLHALCEAVKSRDILGLVQVYADGVDLTEKIPLANGHEQDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTCKGSTALHYCCLTDNVECLKLLLRGKASIEIANESGETPLDIAKRLKHTHCEELLTQALSGRFNSHVHVEYEWRLLHEDLDESDDDVDEKLQQPSPNRREDRPVSFYQLGSNQLQPNVASLARDAANIAKDKQRGFMPSILQNETYGAILSGSPPPIQPTVPVTSSAPPLPPRNIGKVQPSVLGSGIQTISSSNTMWKTNSLGVESISRQRSSSDPPAIHPPVPPLRVTSTNVLSPAPPPPVAKTASIMEALNQQSKQQPAPPQTKPTPPPLPPQPPSRVSQRKPIPGSEKSSALSNKGQSRGLGALQQTAAGESSSVCEIPVTQTGSTVNTLAQIQPPAPMPRKSQISKTKPKRVKAIYNCVADNPDELTFSEGDIIVVDGEEDQEWWIGHIDGDPSRKGAFPVSFVHFIVD", "length": 1034 }, "evidence": [ { "id": "A0A287B4V4", "url": "https://omabrowser.org/oma/group/A0A287B4V4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A1Z7A6-1", "protein_name": "ArfGAP with SH3 domain, ANK repeat and PH domain-containing protein", "gene_name": "Asap", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MPPSLIAVSEFVEETRSDYSSPTTSTFASRMPDCRHTIGVLEERLEFDREGLTKLKKAVKAIHNSGNTHVDNEMFMVRALERLGGKVIEQDEPDIGAAFLKFSVVTKELSALMKTLMQNINNIVMFPVDSMLKSELRGVKGDMKRPFDKAAKDYEAKFIKIEKEKKAQAKEAGMVRTEIDAAVVAEEMEKERRLYQLQTCEYLLKYKDIKTKTGIELLQHLIEYYHALSNYFKDGLQTIEHFGTYIGDLSEKLHEIKQKQDEDRRSLLDLRTVLRSTPDFERVDNVPSSESRSGGAGYSLHQLQGDKHHGVTRQGHLLKKSEGKVRRVWQKRRCRVTSDGFLDIFHADESKPPTRVNLLTCQIKPVPDDKRGFDLISYNRPYHFQAEDEGDQKAWMAVLVNCKEKALTKAFQHANPQMSPSLVELQKTVIRYVQLLPGNDRCCDCGSRNDVTWISLNFGILVCIQCSGVHRDLGVHHSRIQSLTLDNLTTANLLIARAMGNSTLNDIMEAKLGRGKLQHESSMEERYDFIRAKYVAKRYVMRTCSDDNDLRCDLEQAVVNADMSQLLQVWAEGADLTCCLPSSDAGETALHLAVLREMGSTLHIVDFLIQNMPPKGLNKATNPAGLLDVTGKNTALHLCALHDRRECMKLLLRSGADYELKNSQNKTALDIAKEMGHNSCRELIECAIKREKSAFDHINTDWNLPNEDGSTDFSDDETVIDERKSRSRPPSFAGGDSPVLRSRSSTCDSIQSSSSPIANCPSRQFTLPSGLPSYTHSAGTSPKQHISVGQYLGSATNVGGNGPGNGGSSPSSASSQSVRAARNSLNMQSDLGGHVTGARKSTSTANMNSLKKRTAPAPPPGTLGSASSSSFYGTLPHPPRHSQNFDASDIRAINHKNQSLDVAYGTLPHLRSVESSPRGGGGYGYGVSQDPGGSGNGSNNSLMPAMTTFGHKRSPSGESLNRNIHLAGAKLVLPPTGELPTLKHVDKSALTRPKIPPPGPPSEREISNGQSNESISSMDEGPVAPPRKLVNQSANFPDYESWHTDMDSSGGGLDHSAESNVSSSDNDRLNSSPDNPSKTGGAGLGGKFHYNGQRRCRALYDCVADNDDELEFKEGEILIVLNERTDDENWMEGIIEGQPTRKGMFPVSFVHMLPD", "length": 1155 }, "evidence": [ { "id": "A0A287B4V4", "url": "https://omabrowser.org/oma/group/A0A287B4V4/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "O43150-1", "protein_name": "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2", "gene_name": "ASAP2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPDQISVSEFVAETHEDYKAPTASSFTTRTAQCRNTVAAIEEALDVDRMVLYKMKKSVKAINSSGLAHVENEEQYTQALEKFGGNCVCRDDPDLGSAFLKFSVFTKELTALFKNLIQNMNNIISFPLDSLLKGDLKGVKGDLKKPFDKAWKDYETKITKIEKEKKEHAKLHGMIRTEISGAEIAEEMEKERRFFQLQMCEYLLKVNEIKIKKGVDLLQNLIKYFHAQCNFFQDGLKAVESLKPSIETLSTDLHTIKQAQDEERRQLIQLRDILKSALQVEQKEDSQIRQSTAYSLHQPQGNKEHGTERNGSLYKKSDGIRKVWQKRKCSVKNGFLTISHGTANRPPAKLNLLTCQVKTNPEEKKCFDLISHDRTYHFQAEDEQECQIWMSVLQNSKEEALNNAFKGDDNTGENNIVQELTKEIISEVQRMTGNDVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLDVLGTSELLLAKNIGNAGFNEIMECCLPAEDSVKPNPGSDMNARKDYITAKYIERRYARKKHADNAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSHVHVEYEWRLLHEDLDESDDDMDEKLQPSPNRREDRPISFYQLGSNQLQSNAVSLARDAANLAKEKQRAFMPSILQNETYGALLSGSPPPAQPAAPSTTSAPPLPPRNVGKVQTASSANTLWKTNSVSVDGGSRQRSSSDPPAVHPPLPPLRVTSTNPLTPTPPPPVAKTPSVMEALSQPSKPAPPGISQIRPPPLPPQPPSRLPQKKPAPGADKSTPLTNKGQPRGPVDLSATEALGPLSNAMVLQPPAPMPRKSQATKLKPKRVKALYNCVADNPDELTFSEGDVIIVDGEEDQEWWIGHIDGDPGRKGAFPVSFVHFIAD", "length": 1006 }, "evidence": [ { "id": "A0A287B4V4", "url": "https://omabrowser.org/oma/group/A0A287B4V4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5RG20-1", "protein_name": "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2a", "gene_name": "asap2a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPDQITVAEFVTETNEDYKSPTASNFTTRMTHCRNTVSALEEALDVDRSVLYKMKKSVKAIYASGLAHVENEEQYTQALEKFGENCVYRDDPDLGSAFLKFSVFTKELTALFKNLFQNMNNIITFPLDSLLKGDLKGVKGDLKKPFDKAWKDYETKVSKIEKEKKEHARQHGMIRTEISGAEIAEEMEKERRFFQLQMCEYLLKVNEIKIKKGVDLLQNLIKYFHAQCNFFQDGLKAVDNLKPSIEKLATDLHSIKQVQDEERRQLTQLRDVLKTALQVEQKEDSQVRQSATYSLHQPQGNKEHGTERSGNLYKKSDGLRKVWQKRKCTVKNGYLTISHGTANRPPAKLNLLTCQVKHNPEEKKSFDLISHDRTYHFQAEDEPECQIWISVLQNSKEEALNNAFKGDQHVGENNIVQELTKAILGEVKRMAGNDVCCDCGAPGPTWLSTNLGILTCIECSGIHRELGVHYSRIQSLTLDVLSTSELLLAKNVGNAGFNEIMEACLTAEDVIKPNPASDMQARKDFIMAKYTEKRFARKKCPDALSKLHTLCDAVKARDIFSLIQVYAEGVDLMEPIPLANGHEQGETALHLAVRLVDRTSLHIIDFLTQNSLNLDKQTAKGSTALHYCCLTDNSECLKLLLRGKASIDIANEAGETPLDIARRLKHLQCEELLNQALAGKFNAHVHVEYEWRLQHEDLDESDEDLDEKSSPHRRDERPISCYTPGSNSLQLSPASLSRDGRDLVKDKQRFVPNLVNNETYGTIINTSSPVSLSSSAPPLPPRNLVQPSALAGLTQGSPGWKPGSLDLSGRQRSSSDPPNMHPPAPPLRVTSTSLLMPSGAAPPLAKATGMMETMNMQPKPGQGPPGQNINRATSADKNFSKSTLMRSGSIERPGRCQRNHVNSKEVPGGPQNTTGQTLPATHMPRKTYLKPKRVKAMYNCVADNPDELTFSEGELIVVDGEEDQEWWLGHIEGEPMRRGAFPVTFVQFIMD", "length": 991 }, "evidence": [ { "id": "A0A287B4V4", "url": "https://omabrowser.org/oma/group/A0A287B4V4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q7SIG6-1", "protein_name": "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2", "gene_name": "Asap2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPDQISVSEFVAETHEDYKAPTASSFTTRTAQCRNTVAAIEEALDVDRMVLYKMKKSVKAINISGLAHVENEEQYTQALEKFGGNCVCRDDPDLGSAFLKFSVFTKELTALFKNLIQNMNNIISFPLDSLLKGDLKGVKGDLKKPFDKAWKDYETKITKIEKEKKEHAKLHGMIRTEISGAEIAEEMEKERRFFQLQMCEYLLKVNEIKVKKGVDLLQNLIKYFHAQCNFFQDGLKAVESLKPSIETLSTDLHTIKQAQDEERRQLIQLRDILKSALQVEQKESRRDSQLRQSTAYSLHQPQGNKEHGTERNGNLYKKSDGIRKVWQKRKCSVKNGFLTISHGTANRPPAKLNLLTCQVKTNPEEKKCFDLISHDRTYHFQAEDEQECQIWMSVLQNSKEEALNNAFKGDDNTGENNIVQELTKEIISEVQRMTGNDVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSHVHVEYEWRLLHEDLDESDDDVDEKLQPSPNRREDRPVSFYQLGSSQFQSNAVSLARDTANLTKDKQRGFGPSILQNETYGAILSGSPPSSQSIPPSTTSAPPLPPRNVGKDPLTTTPPPPVAKTSGTLEAMNQPSKSSQPGTSQSKPPPLPPQPPSRLPQKKPASGTDKPTPLTNKGQPRGPEASGPLSNAMALQPPAPMPRKSQATKSKPKRVKALYNCVADNPDELTFSEGDVIIVDGEEDQEWWIGHIDGEPSRKGAFPVSFVHFIAD", "length": 958 }, "evidence": [ { "id": "A0A287B4V4", "url": "https://omabrowser.org/oma/group/A0A287B4V4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4V4", "url": "https://www.uniprot.org/uniprotkb/A0A287B4V4" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4V4", "url": "https://www.uniprot.org/uniprotkb/A0A287B4V4" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4V4", "url": "https://www.uniprot.org/uniprotkb/A0A287B4V4" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4V4", "url": "https://www.uniprot.org/uniprotkb/A0A287B4V4" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4V4", "url": "https://www.uniprot.org/uniprotkb/A0A287B4V4" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A287B4V4", "url": "https://www.uniprot.org/uniprotkb/A0A287B4V4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 62, "end_pos": 64, "annotation": "n_glycosylation_sequon" }, { "start_pos": 651, "end_pos": 653, "annotation": "n_glycosylation_sequon" }, { "start_pos": 760, "end_pos": 762, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287B4V4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B4V4" }, { "id": "PS50115", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50115" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Arf-GAP", "eco_id": "ECO_0000259", "start_pos": 421, "end_pos": 543, "start_aa": "Lys", "end_aa": "Asn", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A287B4V4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B4V4" }, { "id": "PS50003", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50003" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PH", "eco_id": "ECO_0000259", "start_pos": 305, "end_pos": 397, "start_aa": "Gly", "end_aa": "Glu", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A287B4V4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B4V4" }, { "id": "PS50002", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50002" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SH3", "eco_id": "ECO_0000259", "start_pos": 948, "end_pos": 1010, "start_aa": "Leu", "end_aa": "Asp", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 845 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 62, "end_pos": 64 }, { "start_pos": 651, "end_pos": 653 }, { "start_pos": 760, "end_pos": 762 } ] }, "class_list": [], "section_stats": [ { 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"MMSAQELVACLCQEGDQHLALGDTPLAAAFYLAAFSCHAPSAVRHVRATLAEVQGSPVVATLEAWCRGDSQIPAIHWDGMVVVSLTGTMASALLATLCPEHPATVLHSLASLLARGRHEEVVQRCGALLDTHCQQTLELQLTRALACILSGTQTDDGVADYLQAFATSADRTVAFIHTHQQPYLPALVSTLQGYVVGHQEAGNSASQQETDCWELLAALDPGGTWSNALSPEALLRRGRYADCKEACSQALDVDPAGSRPQGARLATLLVTRAAAAFFLNSRAQDLLRDLHEAFHESPSAARKQFESVLSTTDQACLRARVLEAAEVGFTHFQEAVRNRPELREDSDRELLAPVTRALRVLVRMAPPGARPALGTRLAECLLLAGDAAGARALCERLLRPSHTGDRARDRAPLLALRGFCALHTGDTQRAQEDFQKVVELGPPHPGSCLRALCGRGLLRVLAGSEFLGALDYVTACRLRLEEALLVTKAYVPWNQRGLLLTVLREEGRRMLQRRPDPGSKSAPGCRRKAAEIHGPVAQEGVAHGVYQLATLLTELDSEDEASRLLVADALYRLGRLDDAHKALLVALSRRPQAAPVLVRLALLQLRRGFLYDANQLVKKVVQSRDTACLQPTLDVFHHEDRQRLRGHCHARALSILRARPGGAEGGAHTREAIAYLSLAIFAAGSQASESLLARARCYGFLGRKKTAMFDFNSVLRAEPGNTQALCGRALLHLALDQQKEAVDDILSALQRGPSTAVPEIRSLKPEAQALITQGLSSRCRALLSQLRDTGARLSDKDTQSLLAAGKALIEIDAGQPGWHVLLADVLATVGSFEEAGTCLQKVLQPTPPTEAARARRGLLRLKKGDVLAAAHDLQCLAESDTQDLGFLLRLLEASEQQRLTQAAAQEADTLLNSGQPGQALGYCSLAVLAGGGQACHLRLRATCLAELHEFGRALRDLDHVLQEGSGDSDLQTQAADFCSQGRLLLNLGDEAGAARAFSQALKLAPTLAQSSLQEQPGKAPTTRALLCRAQRCLEEQCYTEAWTAAEGGLLVDPEHRGLKRLKARLRRETSSGCRLH", "length": 1076, "header": "tr|A0A287B552-1|A0A287B552_PIG Isoform 1 of Tetratricopeptide repeat domain 34 OS=Sus scrofa OX=9823 GN=TTC34 PE=4 SV=1 CANONICAL=A0A287B552-1" }, "locus": { "chromosome": "6", "start_pos": 64498996, "end_pos": 64480383, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000057284.3", "url": "https://www.ensembl.org/id/ENSSSCT00000057284.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051566.1", "url": "https://www.ensembl.org/id/ENSSSCP00000051566.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 846, "start_aa": "Thr", "end_pos": 846, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr846", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B552", "url": "https://www.uniprot.org/uniprotkb/A0A287B552" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100626203", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100626203", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZHQ3-1", "protein_name": "Tetratricopeptide repeat domain 34", "gene_name": "TTC34", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSPQGLAALLCREGDQHLAQQELPTATAFYVAAFSCSAPTALQKVNSLENGLWERVIATLEMWCRGKSQIPKIQSKNVAIASLRVEIAAVFLSTLSPDNVLSSVYKLEALLRRGCSEEVVSKCNVLLKAHPKYSVELLLLRALAWVLSGTQIRKGVADYIQVFVRHQAEAVAYVCTRQKEHLPQIIQAFSNFLSTYQKESPDGSSLDHWLGNCYAFLSAVAPGDVWVCRAQAAYLFKKSKFEECVAVCSKALRGLSVDNSLRDEKMLGLLLERAAAYFFLGGRMQEMMQDLAEAFAASPDLAMKHFEELFSPPDTEKIEEQARTVLEVKFAAYREAVRARTELRSNRCTELLPSVIQTVLFLLRISPGSKRELSVRLADCHLLHGHIGAALEICDQLLAAEQKTYHNTLLALRGFCALHSHDHQQALQDFQKVIEHDSPHPNSCIKALCGRGLIRISGGSHYLTALDYITACQLKLEETIFTIKAYVPWNQRGLLLKVLQEEGQKMLQKKRDALGVYQLASLLMELDPSDEASRILCADALYQMGWVEEAHKLLSLALSRNPQRSPILARLALLQLKKGFMYDGNQLLKKVIKLGDTSCLLPIMDIFKDEDRKLMQTHCRSRALSILKNKREDADIKEAIAYLSFAIIASGGYAEDCLLIRAQCYGHLGQKKTAIFDFNAVLKEDPGNVHALSGRGLIYLALKQQKEAVQDLILALKAEAGMVIPAILSLKHEAQELVAQWLLQHSRTVLAELVATKDFSKEERTLRDLLVIAGALIKVRKEAQYHTFYTDVLIANGRYEEALAHLQEAFGHSLADELASARLAVLQLKKRNVPAAAHSFSILAKKDERELEFLLNFVDAKQQQHLSQVAAQEGNVLIKGYHYKKALGYFTLAILTSKDNPRYLRQRAACFMHLKKYDKALKDMEKVIEKHGCNSLRTRVQDHCSKGYLLLSVSEEGAAVKQYIEALQLDESTALCSIMNGSGSENVAKTFHKIAQCNFESQHYEEAWKITDYGLKIDQNNPDLKKLKTRLKREASGCSIH", "length": 1041 }, "evidence": [ { "id": "A0A287B552", "url": "https://omabrowser.org/oma/group/A0A287B552/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A8MYJ7-1", "protein_name": "Tetratricopeptide repeat protein 34", "gene_name": "TTC34", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLQRSPRAGPSRAQGRREAAETGGPTTQEGVACGVHQLATLLMELDSEDEASRLLAADALYRLGRLEETHKALLVALSRRPQAAPVLARLALLQLRRGFFYDANQLVKKLVQSGDTACLQPTLDVFCHEDRQLLQGHCHARALAILRARPGGADGRVHTKEAIAYLSLAIFAAGSQASESLLARARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQEAVDDIVSALKLGPGTVVPELRSLKPEAQALITQGLYSHCRALLSQLPDTGAPLEDKDTQGLLAVGEALIKIDSGQPHWHLLLADILMAQGSYEEAGTHLEKALHRAPTSEAARARLGLLQLKKGDVPGAARDLQSLAEVDAPDLSCLLHLLEASERQSLAQAAAQEAGTLLDAGQPRQALGYCSLSVLASGSSACHLRLRATCLAELQEFGRALRDLDHVLQEALGDGDLPRRAEDFCRQGRLLLSLGDEAAAAGAFAQALKLAPSLAQNSLCRQPGRAPTARMFLLRGQCCLEEQRHAEAWTAVESGLLVDPDHRGLKRLKARIRREASSGCWLQ", "length": 566 }, "evidence": [ { "id": "A0A287B552", "url": "https://omabrowser.org/oma/group/A0A287B552/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "D3ZC99-1", "protein_name": "Tetratricopeptide repeat domain 34", "gene_name": "Ttc34", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"length": 1064 }, "evidence": [ { "id": "A0A287B552", "url": "https://omabrowser.org/oma/group/A0A287B552/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8C0Q3-1", "protein_name": "Tetratricopeptide repeat protein 34", "gene_name": "Ttc34", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLRSPSYAGKAAQAQEGDAYGVYQLATLLIGMDAEDETSCLLAADALYRLGRLDDAHKSLLVALSQRPQAAPVLVRLALLQLRRGFCYDANQLVKKVAQSGDTACLQHMLDIFHHEDLQLLQDHCHTRALSILRARPGGSDSEAHTREAIAYLSLAIFAAGSGGSESLLVRARCYGLLGQKKTAMFDFNAILREEPGNVKALCGRALVHLALDQLQEAVDDMVSALKLDPGTVIPEILSLKTEVQLPLTQGLYTRCRVLLNQCLHTGVPLREEDTQGLLAMGKALIRINATQPSWRLLLTDILTGLGKYQEAGTHLQEALHLTPSSEAAQARQGLLQLKKGDVSAAVHGLQCLAERDTQDLGFLLCLLDSPERQSLVQTAAKEASNILDLGNPGQALSYCSLAILAGGNNPYHLRLRVACLTQLQEYDRALRDLDRVLQHPAEDSDLPRQSEDFCTRGRLLLSLGDKDGAAGAFTQALALAPAQAQNSLLEQPGQAMTASVFLIHGQRCLEEEHFEEAWTAVQNGLLVDPSHSGLKKLKLRTRKVATSGCRLH", "length": 554 }, "evidence": [ { "id": "A0A287B552", "url": 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"count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B561-1", "uniprot_ac": "A0A287B561", "uniprot_id": "A0A287B561_PIG", "mass": { "chemical_mass": 13596.0, "monoisotopic_mass": 13596.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "A0A287B561", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B561/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B561", "url": "https://www.uniprot.org/uniprotkb/A0A287B561" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/A0A287B561", "locus": {} } ], "crossref": [ { "id": "A0A287B561", "url": "https://alphafold.ebi.ac.uk/entry/A0A287B561", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000042156", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000042156", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "A0A287B561", "url": "https://www.uniprot.org/uniprotkb/A0A287B561", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B561-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B561-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "CSFPSDVFTPGESAVYTSSVSTSRLDTAQIATTRYTCTSTSAASAAAAAGPTTSREDALGAAPPSSSHSSTVAVAVSAGSPWSFTSTSRRWRAASASSRARVVLISPVYSPTRNALRAPPGAAASSCSSYDSHAL", "length": 135, "header": "tr|A0A287B561-1|A0A287B561_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=2 CANONICAL=A0A287B561-1" }, "isoforms": [ { "isoform_ac": "A0A287B561-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B561/entry", "sequence": { "sequence": "CSFPSDVFTPGESAVYTSSVSTSRLDTAQIATTRYTCTSTSAASAAAAAGPTTSREDALGAAPPSSSHSSTVAVAVSAGSPWSFTSTSRRWRAASASSRARVVLISPVYSPTRNALRAPPGAAASSCSSYDSHAL", "length": 135, "header": "tr|A0A287B561-1|A0A287B561_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=2 CANONICAL=A0A287B561-1" }, "locus": { "chromosome": "2", "start_pos": 142462595, "end_pos": 142462023, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056721.2", "url": "https://www.ensembl.org/id/ENSSSCT00000056721.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051576.2", "url": "https://www.ensembl.org/id/ENSSSCP00000051576.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", 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9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B5R2", "url": "https://www.uniprot.org/uniprotkb/A0A287B5R2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RASA2", "url": "https://www.uniprot.org/uniprotkb/A0A287B5R2", "locus": { "chromosome": "13", "start_pos": 82352756, "end_pos": 82230178, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011672", "url": "https://www.ensembl.org/id/ENSSSCG00000011672" } ] } } ], "crossref": [ { "id": "ENSSSCG00000011672", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011672", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd04010", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04010", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd08401", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd08401", "database": "CDD", "categories": [ "Protein 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10194", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10194:SF21", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10194:SF21", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00168", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00168", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00169", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00169", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00616", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00616", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00779", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00779", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-5658442", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5658442", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020925204", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925204", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B5R2", "url": "https://www.uniprot.org/uniprotkb/A0A287B5R2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B5R2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B5R2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAAAPAAAAASSEAPAATATAEPEAGDEDSREVRVLQSLRGKICEAKNLLPYLGPNKMRDCFCTINLDQEEVYRTQVVEKSLSPFFSEEFYFEIPRTFQYLSFYVYDKNVLQRDLRIGKVAIKKEDLCNHSGKETWFSLQPVDSNSEVQGKVHLELKLNELITENGTVCQQLVVHIKACHGLPLINGQSCDPYATVSLVGPSRNDQKKTKVKKKTSNPQFNEIFYFEVTRSSSYTRKSQFQVEEEDIEKLEIRIDLWNNGNLVQDVFLGEIKVPVNVLRNDSSHQAWYLLQPRDNGNKSSKTDDLGSLRLNICYTEDYVLPSEYYGPLKTLLLKSPDVQPISASAAYILGEICRDKNDAVLPLVRLLLHHDKLVPFATAVAELDLKDIQDANTIFRGNSLATRCLDEMMKIVGGHYLKVTLKPILDEICESSKSCEIDPIKLKEGDNVENNKENLRYYVDKLFSTIVKSSMSCPTVMCDIFYSLRQMATQRFPNDPHVQYSAVSSFVFLRFFAVAVVSPHTFHLRPHHPDPQTIRTLTLISKTIQTLGSWGSLSKSKSSFKETFMCEFFKMFQEEGYIMAVKKFLDEISSTETKESSGTSEPVHLKEGEMYKRAQGRTRIGKKNFKKRWFCLTSRELTYHKQPGKDAIYTIPVKNILAVEKLEESSFNKKNMFQVIHTEKPLYVQANNCVEANEWIDVLCRVSRCNQNRLTFYHPSAYLNGSWLCCLETSENALGCKPCTAGVPADIQIDIDEDRETERIYSLFTLSLLKLQKMEEACGTIAVYQGPQKEPDDYSNFVIEDSVTTFKTIQQIKSIIEKLDEPHEKYRKKRSSSAKYGSKENPIGGKTT", "length": 849, "header": "tr|A0A287B5R2-1|A0A287B5R2_PIG Isoform 1 of Ras GTPase-activating protein 2 OS=Sus scrofa OX=9823 GN=RASA2 PE=4 SV=1 CANONICAL=A0A287B5R2-1" }, "isoforms": [ { "isoform_ac": "A0A287B5R2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B5R2/entry", "sequence": { "sequence": "MAAAAPAAAAASSEAPAATATAEPEAGDEDSREVRVLQSLRGKICEAKNLLPYLGPNKMRDCFCTINLDQEEVYRTQVVEKSLSPFFSEEFYFEIPRTFQYLSFYVYDKNVLQRDLRIGKVAIKKEDLCNHSGKETWFSLQPVDSNSEVQGKVHLELKLNELITENGTVCQQLVVHIKACHGLPLINGQSCDPYATVSLVGPSRNDQKKTKVKKKTSNPQFNEIFYFEVTRSSSYTRKSQFQVEEEDIEKLEIRIDLWNNGNLVQDVFLGEIKVPVNVLRNDSSHQAWYLLQPRDNGNKSSKTDDLGSLRLNICYTEDYVLPSEYYGPLKTLLLKSPDVQPISASAAYILGEICRDKNDAVLPLVRLLLHHDKLVPFATAVAELDLKDIQDANTIFRGNSLATRCLDEMMKIVGGHYLKVTLKPILDEICESSKSCEIDPIKLKEGDNVENNKENLRYYVDKLFSTIVKSSMSCPTVMCDIFYSLRQMATQRFPNDPHVQYSAVSSFVFLRFFAVAVVSPHTFHLRPHHPDPQTIRTLTLISKTIQTLGSWGSLSKSKSSFKETFMCEFFKMFQEEGYIMAVKKFLDEISSTETKESSGTSEPVHLKEGEMYKRAQGRTRIGKKNFKKRWFCLTSRELTYHKQPGKDAIYTIPVKNILAVEKLEESSFNKKNMFQVIHTEKPLYVQANNCVEANEWIDVLCRVSRCNQNRLTFYHPSAYLNGSWLCCLETSENALGCKPCTAGVPADIQIDIDEDRETERIYSLFTLSLLKLQKMEEACGTIAVYQGPQKEPDDYSNFVIEDSVTTFKTIQQIKSIIEKLDEPHEKYRKKRSSSAKYGSKENPIGGKTT", "length": 849, "header": "tr|A0A287B5R2-1|A0A287B5R2_PIG Isoform 1 of Ras GTPase-activating protein 2 OS=Sus scrofa OX=9823 GN=RASA2 PE=4 SV=1 CANONICAL=A0A287B5R2-1" }, "locus": { "chromosome": "13", "start_pos": 82349764, "end_pos": 82230188, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053735.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053735.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051635.1", "url": "https://www.ensembl.org/id/ENSSSCP00000051635.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B5R2", "url": "https://www.uniprot.org/uniprotkb/A0A287B5R2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-5658442", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5658442", "resource": "Reactome", "description": "Regulation of RAS by GAPs" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1A2A7-1", "protein_name": "RAS p21 protein activator 2", "gene_name": "RASA2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": 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"Chicken" }, { "uniprot_canonical_ac": "P58069-1", "protein_name": "Ras GTPase-activating protein 2", "gene_name": "Rasa2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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"Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q63713-1", "protein_name": "Ras GTPase-activating protein 2", "gene_name": "Rasa2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "negative regulation of Ras protein signal transduction", "id": "GO:0046580", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046580", "evidence": [ { "database": "UniProtKB", "id": "A0A287B5R2", "url": "https://www.uniprot.org/uniprotkb/A0A287B5R2" } ], "pmid": "" }, { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "A0A287B5R2", "url": "https://www.uniprot.org/uniprotkb/A0A287B5R2" } ], "pmid": "" }, { "name": "regulation of intracellular signal transduction", "id": "GO:1902531", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902531", "evidence": [ { "database": "UniProtKB", "id": "A0A287B5R2", "url": "https://www.uniprot.org/uniprotkb/A0A287B5R2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { 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"MSVPQVQVEEAVCGEEGPAEAAPPPDDHLRSLKALTEKLRLETRRPSYLEWQARLEEQTWPFPRPAAGQRGCAEKEAVLPPRAPGQHPPPNRRASQDDEPQATGRLEGFESIDEALAWLRKELTEMRLQDQQLARQLMRLRSDIHKLKIEQTCDLHRRMLNDATYELEERDELSDLFCDAPLASSFSLSAPLKLIGVTKMNINSRRFSLC", "length": 210, "header": "tr|A0A287B6D5-1|A0A287B6D5_PIG Isoform 1 of Family with sequence similarity 167 member A OS=Sus scrofa OX=9823 GN=FAM167A PE=3 SV=1 CANONICAL=A0A287B6D5-1" }, "isoforms": [ { "isoform_ac": "A0A287B6D5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6D5/entry", "sequence": { "sequence": "MSVPQVQVEEAVCGEEGPAEAAPPPDDHLRSLKALTEKLRLETRRPSYLEWQARLEEQTWPFPRPAAGQRGCAEKEAVLPPRAPGQHPPPNRRASQDDEPQATGRLEGFESIDEALAWLRKELTEMRLQDQQLARQLMRLRSDIHKLKIEQTCDLHRRMLNDATYELEERDELSDLFCDAPLASSFSLSAPLKLIGVTKMNINSRRFSLC", "length": 210, "header": "tr|A0A287B6D5-1|A0A287B6D5_PIG Isoform 1 of Family with sequence similarity 167 member A OS=Sus scrofa OX=9823 GN=FAM167A PE=3 SV=1 CANONICAL=A0A287B6D5-1" }, "locus": { "chromosome": "14", "start_pos": 14648330, "end_pos": 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Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B6D5", "url": "https://www.uniprot.org/uniprotkb/A0A287B6D5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:102162353", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102162353", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2MR57-1", "protein_name": "Protein FAM167A", "gene_name": "Fam167a", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSVPRIQVDEVGENDRPAGAAAPPDDHLLSLKALTEKLRLETRRPSYLEWQARLEEQTWPFPRSAAQQEASLEEGACGGGEPSIPLRESRELLPPARSASQGDGPLTTGKLEGFQSIDEAITWLRKELAEMRLQDQQLARQLMRLRGDINKLKIEQTCRLHRRMLNDAAYELEERDELSDLFCDSPLASSFSLSTPLKLIGVTKMNINSRRFSLC", "length": 215 }, "evidence": [ { "id": "A0A287B6D5", "url": "https://omabrowser.org/oma/group/A0A287B6D5/", "database": "OMA" } ], "glygen_name": "Hamster", 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{ "id": "PTHR12610", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12610", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12610:SF30", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12610:SF30", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04503", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04503", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020939173", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939173", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B6D9", "url": "https://www.uniprot.org/uniprotkb/A0A287B6D9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6D9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6D9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGN2", "url": "https://www.uniprot.org/uniprotkb/I3LGN2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGN2-1", "url": "https://www.uniprot.org/uniprotkb/I3LGN2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MYAKGGKGSAVPSDSQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKNITLGEPPGFLHSWWCVFWDLYCAAPDRREACEHSSEAKAFQDYSTTAAPSPVMGGMAASDAMASGPMAPGFFQGPPGSQPPPHNPNAPMMGPHVQPFMSPRFPGGPRPTLRMPSQPPVGLPGSQPLLPGAMDPSPRAQGHSSMGPMQRVTPPRGMTSVGPQSYGGGMRPPPNSLAGPGLPTMNMGPGVRGPWASPSSNSIPYSSSSPGSYTGPPGGGGPPGTPIMPSPGDSTNSSENMYTIMNPIGPAAGRANFPLGPGPEGPMAAMSAMEPHHVNGSLGSGDLDGLPKSSPGAVAGLSNTPGTPRDDGEMAAAGTFLHPFPSESVSDCVDSPPRRRRAGGAWRADPGGAAGGPEQDRDRGGPVLPRDDHERVMGPQPLAHCRPRLLPGAPPWGQGPGARVVCRVRV", "length": 457, "header": "tr|A0A287B6D9-1|A0A287B6D9_PIG Isoform 1 of Single stranded DNA binding protein 4 OS=Sus scrofa OX=9823 GN=SSBP4 PE=4 SV=2 CANONICAL=A0A287B6D9-1" }, "isoforms": [ { "isoform_ac": "A0A287B6D9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6D9/entry", "sequence": { "sequence": "MYAKGGKGSAVPSDSQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKNITLGEPPGFLHSWWCVFWDLYCAAPDRREACEHSSEAKAFQDYSTTAAPSPVMGGMAASDAMASGPMAPGFFQGPPGSQPPPHNPNAPMMGPHVQPFMSPRFPGGPRPTLRMPSQPPVGLPGSQPLLPGAMDPSPRAQGHSSMGPMQRVTPPRGMTSVGPQSYGGGMRPPPNSLAGPGLPTMNMGPGVRGPWASPSSNSIPYSSSSPGSYTGPPGGGGPPGTPIMPSPGDSTNSSENMYTIMNPIGPAAGRANFPLGPGPEGPMAAMSAMEPHHVNGSLGSGDLDGLPKSSPGAVAGLSNTPGTPRDDGEMAAAGTFLHPFPSESVSDCVDSPPRRRRAGGAWRADPGGAAGGPEQDRDRGGPVLPRDDHERVMGPQPLAHCRPRLLPGAPPWGQGPGARVVCRVRV", "length": 457, "header": "tr|A0A287B6D9-1|A0A287B6D9_PIG Isoform 1 of Single stranded DNA binding protein 4 OS=Sus scrofa OX=9823 GN=SSBP4 PE=4 SV=2 CANONICAL=A0A287B6D9-1" }, "locus": { "chromosome": "2", "start_pos": 59384252, "end_pos": 59367481, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054589.3", "url": "https://www.ensembl.org/id/ENSSSCT00000054589.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052081.2", "url": "https://www.ensembl.org/id/ENSSSCP00000052081.2" } ] } }, { "isoform_ac": "I3LGN2-1", "url": "https://www.uniprot.org/uniprotkb/I3LGN2/entry", "sequence": { "sequence": "MYAKGGKGSAVPSDSQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKNITLGEPPGFLHSWWCVFWDLYCAAPDRREACEHSSEAKAFQDYSTTAAPSPVMGGMAASDAMASGPMAPGFFQPFMSPRFPGGPRPTLRMPSQPPVGLPGSQPLLPGAMDPSPRAQGHSSMGPMQRVTPPRGMTSVGPQSYGGGMRPPPNSLAGPGLPTMNMGPGVRGPWASPSSNSIPYSSSSPGSYTGPPGGGGPPGTPIMPSPGDSTNSSENMYTIMNPIGPAAGRANFPLGPGPEGPMAAMSAMEPHHVNGSLGSGDLDGLPKSSPGAVAGLSNTPGTPRDDGEMAAAGTFLHPFPSESVSDCVDSPPRRRRAGGAWRADPGGAAGGPEQDRDRGGPVLPRDDHERVMGPQPLAHCRPRLLPGAPPWGQGPGARVVCRVRV", "length": 435, "header": "tr|I3LGN2-1|A0A287B6D9_PIG Computationally mapped isoform of Single stranded DNA binding protein 4 OS=Sus scrofa OX=9823 GN=SSBP4 PE=4 SV=3 CANONICAL=A0A287B6D9-1" }, "locus": { "chromosome": "2", "start_pos": 59384252, "end_pos": 59367481, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030560.4", "url": "https://www.ensembl.org/id/ENSSSCT00000030560.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023226.3", "url": "https://www.ensembl.org/id/ENSSSCP00000023226.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 200, "start_aa": "Thr", "end_pos": 200, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr200", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LGN2", "url": "https://www.uniprot.org/uniprotkb/I3LGN2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "transcription coactivator activity", "id": "GO:0003713", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003713", "evidence": [ { "database": "UniProtKB", "id": "A0A287B6D9", "url": "https://www.uniprot.org/uniprotkb/A0A287B6D9" } ], "pmid": "" }, { "name": "single-stranded DNA binding", "id": "GO:0003697", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003697", "evidence": [ { "database": "UniProtKB", "id": "A0A287B6D9", "url": "https://www.uniprot.org/uniprotkb/A0A287B6D9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A287B6D9", "url": "https://www.uniprot.org/uniprotkb/A0A287B6D9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "A0A287B6D9", "url": "https://www.uniprot.org/uniprotkb/A0A287B6D9" } ], "pmid": "" } ] } ] }, "pro_annotation": 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"gene": [ { "name": "C6H16orf87", "url": "https://www.uniprot.org/uniprotkb/A0A287B6J5", "locus": {} } ], "crossref": [ { "id": "A0A287B6J5", "url": "https://alphafold.ebi.ac.uk/entry/A0A287B6J5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000022333", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000022333", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR018886", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018886", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040246", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040246", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "QHVPVAC", "url": "https://omabrowser.org/oma/group/QHVPVAC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287B6J5", "url": "https://www.orthodb.org/?gene=A0A287B6J5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31101", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31101", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF10571", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10571", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287B6J5", "url": "https://www.uniprot.org/uniprotkb/A0A287B6J5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6J5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6J5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LI28", "url": "https://www.uniprot.org/uniprotkb/I3LI28", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LI28-1", "url": "https://www.uniprot.org/uniprotkb/I3LI28-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSATRAKKVKMATKSCPECDQQVPVACKSCPCGYIFISRKLLNAKHPEKSSSTTENKHEAKRRRTERVRREKINSTVNKDLENRKRSRSNSHSDHIRRGRGRPKSASAKKHEEEREKQEKEIDIYANLSDEKAFVFSVALAEINRKIINQRLIL", "length": 154, "header": "tr|A0A287B6J5-1|A0A287B6J5_PIG Isoform 1 of Chromosome 6 C16orf87 homolog OS=Sus scrofa OX=9823 GN=C6H16orf87 PE=3 SV=1 CANONICAL=A0A287B6J5-1" }, "isoforms": [ { "isoform_ac": "A0A287B6J5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6J5/entry", "sequence": { "sequence": "MSATRAKKVKMATKSCPECDQQVPVACKSCPCGYIFISRKLLNAKHPEKSSSTTENKHEAKRRRTERVRREKINSTVNKDLENRKRSRSNSHSDHIRRGRGRPKSASAKKHEEEREKQEKEIDIYANLSDEKAFVFSVALAEINRKIINQRLIL", "length": 154, "header": "tr|A0A287B6J5-1|A0A287B6J5_PIG Isoform 1 of Chromosome 6 C16orf87 homolog OS=Sus scrofa OX=9823 GN=C6H16orf87 PE=3 SV=1 CANONICAL=A0A287B6J5-1" }, "locus": { "chromosome": "6", "start_pos": 37816302, "end_pos": 37784832, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051277.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051277.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052142.1", "url": "https://www.ensembl.org/id/ENSSSCP00000052142.1" } ] } }, { "isoform_ac": "I3LI28-1", "url": "https://www.uniprot.org/uniprotkb/I3LI28/entry", "sequence": { "sequence": "MSATRAKKVKMATKSCPECDQQVPVACKSCPCGYIFISRKLLNAKHPEKSSSTTEKQEKEIDIYANLSDEKAFVFSVALAEINRKIINQRLIL", "length": 93, "header": "tr|I3LI28-1|A0A287B6J5_PIG Computationally mapped isoform of Chromosome 6 C16orf87 homolog OS=Sus scrofa OX=9823 GN=C6H16orf87 PE=3 SV=3 CANONICAL=A0A287B6J5-1" }, "locus": { "chromosome": "6", "start_pos": 37816302, "end_pos": 37784832, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026506.3", "url": "https://www.ensembl.org/id/ENSSSCT00000026506.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023727.3", "url": "https://www.ensembl.org/id/ENSSSCP00000023727.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], 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Classification" ] }, { "id": "FCVCIDI", "url": "https://omabrowser.org/oma/group/FCVCIDI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR22791", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22791", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22791:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22791:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13639", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13639", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020950845", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020950845", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B6M6", "url": "https://www.uniprot.org/uniprotkb/A0A287B6M6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6M6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6M6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSGPRVWHPVMPPSSRSSPTATVPRSPSSASSPRSPGTPGSEKVASPLECSICFSGYDNTFKTPKELSCTHVFCLECLARLAAAQPSGRPGGEAMPCPFCRQPTAVPAAGAPALRTSRQLQARMPAHLRREEPVWLEGTKLCCRPQPSAPGLAAPGFISVDVGLSKPSEPPVPIPTLGAARRSGRLARCWARCGDWRRVALITALLLVLFCVVLWPVQCALKTGSLRCLSRPPATTTAATTYSFGSLADN", "length": 250, "header": "tr|A0A287B6M6-1|A0A287B6M6_PIG Isoform 1 of Ring finger protein 223 OS=Sus scrofa OX=9823 GN=RNF223 PE=4 SV=1 CANONICAL=A0A287B6M6-1" }, "isoforms": [ { "isoform_ac": "A0A287B6M6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6M6/entry", "sequence": { "sequence": "MSGPRVWHPVMPPSSRSSPTATVPRSPSSASSPRSPGTPGSEKVASPLECSICFSGYDNTFKTPKELSCTHVFCLECLARLAAAQPSGRPGGEAMPCPFCRQPTAVPAAGAPALRTSRQLQARMPAHLRREEPVWLEGTKLCCRPQPSAPGLAAPGFISVDVGLSKPSEPPVPIPTLGAARRSGRLARCWARCGDWRRVALITALLLVLFCVVLWPVQCALKTGSLRCLSRPPATTTAATTYSFGSLADN", "length": 250, "header": "tr|A0A287B6M6-1|A0A287B6M6_PIG Isoform 1 of Ring finger protein 223 OS=Sus scrofa OX=9823 GN=RNF223 PE=4 SV=1 CANONICAL=A0A287B6M6-1" }, "locus": { "chromosome": "6", "start_pos": 63414349, "end_pos": 63413600, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090686.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090686.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073326.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073326.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 38, "start_aa": "Thr", "end_pos": 38, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr38", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B6M6", "url": "https://www.uniprot.org/uniprotkb/A0A287B6M6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0ABK0M3P9-1", "protein_name": "Ring finger protein 223", "gene_name": "Rnf223", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSVQRIWRTAMPPYHQNSSTATVPRSPGSSGSPKSPSTPGSVKVASPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPAGRPGREAVPCPFCRQPTTVPAAGAPALRTSRQLQAKMPAHLQREEPVWLEGTKLCCRPSPTASGQEASDFVCVDVGLSKPPEPTVPIPVQDPAPNPGCLARCWARCREWRRVALVSVLLLVLFCVVLWPVHCALKTGNLHCINRPPAATVTIAATTDALSLGLLANN", "length": 255 }, "evidence": [ { "id": "A0A287B6M6", "url": "https://omabrowser.org/oma/group/A0A287B6M6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E7ERA6-1", "protein_name": "RING finger protein 223", "gene_name": "RNF223", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSSGQQVWHTAVPPPRRSSSIASMPRSPSSAGSPRSPGTPGSERVASPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAVPPAGAPALCTSRQLQARMPAHLRREEPVWLEGTKLCCQPLPTTPGREPGFVCVDVGLSKPAEPPAPARDPAPRRGRLARCWARCRDWRRMALVSALLLMLFCVALWPVQCALKTGNLRCLPLPPRPPATSTAASPLGPLTDN", "length": 249 }, "evidence": [ { "id": "A0A287B6M6", "url": "https://omabrowser.org/oma/group/A0A287B6M6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q3UV31-1", "protein_name": "RING finger protein 223", "gene_name": "Rnf223", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVHKKRGGVTSWLFRKSPVHNVLPLLHSWESCHQATGCGVQLCHPTARTAPQPQCPGPLAQGAAPSPSTPGSVKVASPLECSICFSGYDNIFKTPKELSCSHVFCLECLARLAAAQPAGRSGREAVPCPFCRQPTTVPVAGAPALRTSRQLQAKLPAHLQREEPVWLEGTKLCCRPLPTTSGQEDGGFVSVDVGLSKPAEPTLPVPVQDPAPNPGWLARCWARFRDWRRVALVSVLLLVLFCVILWPVQCALKTGNLRCINRPPAATATATVTTDALSFGVLANN", "length": 285 }, "evidence": [ { "id": "A0A287B6M6", "url": "https://omabrowser.org/oma/group/A0A287B6M6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A287B6M6", "url": "https://www.uniprot.org/uniprotkb/A0A287B6M6" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "A0A287B6M6", "url": "https://www.uniprot.org/uniprotkb/A0A287B6M6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "A0A287B6M6", "url": 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"database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B6P1/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B6P1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6P1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/A0A287B6P1", "locus": {} } ], "crossref": [ { "id": "A0A287B6P1", "url": "https://alphafold.ebi.ac.uk/entry/A0A287B6P1", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000035599", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000035599", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR026523", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026523", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048270", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048270", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048271", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048271", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR23095", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23095", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23095:SF20", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23095:SF20", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF14893", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14893", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF20846", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF20846", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287B6P1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6P1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6P1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6P1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MALAMLRDWCRWMGVKAQRALLILGIPDDCEDQEFLEDQEFQEAVRAALRPLGRYRVLGKVFRKELGCRVALVEFADSFNRSLIPQQIRGRGGPWTVVFLPQTEDAGVAGDAGEAGAAGETEDAVAGVAGSLSMAGAAGEAGAPGEGAGAMGYEELRAFSGLGEPGGGEESFESWLDHANDMLYLWRHVSERERRRRLVESLGGPALDLLCGLLAQDADMAAQDCLAALVQVFGDQDSPVTARLRFATCAQRPQETLFAYVMRLEGLLQAAVETEAIHPATADQARARQVLMRARPNDTLQTKLRRLRLERRPPGFVGLLRLIRESEAWEAEPAATTHAGLGDLRGHVKVPGPPERGPLSSVPRGRQAAPCAGSPPVSL", "length": 379, "header": "tr|A0A287B6P1-1|A0A287B6P1_PIG Isoform 1 of PNMA family member 6E OS=Sus scrofa OX=9823 GN= PE=4 SV=2 CANONICAL=A0A287B6P1-1" }, "isoforms": [ { "isoform_ac": "A0A287B6P1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6P1/entry", "sequence": { "sequence": "MALAMLRDWCRWMGVKAQRALLILGIPDDCEDQEFLEDQEFQEAVRAALRPLGRYRVLGKVFRKELGCRVALVEFADSFNRSLIPQQIRGRGGPWTVVFLPQTEDAGVAGDAGEAGAAGETEDAVAGVAGSLSMAGAAGEAGAPGEGAGAMGYEELRAFSGLGEPGGGEESFESWLDHANDMLYLWRHVSERERRRRLVESLGGPALDLLCGLLAQDADMAAQDCLAALVQVFGDQDSPVTARLRFATCAQRPQETLFAYVMRLEGLLQAAVETEAIHPATADQARARQVLMRARPNDTLQTKLRRLRLERRPPGFVGLLRLIRESEAWEAEPAATTHAGLGDLRGHVKVPGPPERGPLSSVPRGRQAAPCAGSPPVSL", "length": 379, "header": "tr|A0A287B6P1-1|A0A287B6P1_PIG Isoform 1 of PNMA family member 6E OS=Sus scrofa OX=9823 GN= PE=4 SV=2 CANONICAL=A0A287B6P1-1" }, "locus": { "chromosome": "X", "start_pos": 124146541, "end_pos": 124144294, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038058.2", "url": "https://www.ensembl.org/id/ENSSSCT00000038058.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051967.2", "url": "https://www.ensembl.org/id/ENSSSCP00000051967.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B6P1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6P1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 297, "end_pos": 299, "annotation": "n_glycosylation_sequon" }, { "start_pos": 80, "end_pos": 82, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287B6P1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 379, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287B6P1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287B6P1" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287B6P1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B6P1" }, { "id": "PF14893", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14893" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Paraneoplastic antigen Ma-like C-terminal", "eco_id": "ECO_0000259", "start_pos": 159, "end_pos": 320, "start_aa": "Phe", "end_aa": "Leu", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A287B6P1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B6P1" }, { "id": "PF20846", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF20846" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Paraneoplastic antigen Ma-like N-terminal", "eco_id": "ECO_0000259", "start_pos": 1, "end_pos": 98, "start_aa": "Met", "end_aa": "Val", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 297, "end_pos": 299 }, { "start_pos": 80, "end_pos": 82 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B6Q0-1", "uniprot_ac": "A0A287B6Q0", "uniprot_id": "A0A287B6Q0_PIG", "mass": { "chemical_mass": 227348.0, "monoisotopic_mass": 227348.0 }, "refseq": { "ac": "XP_020944947", "name": "PHD finger protein 3 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020944947" }, "gene_names": [ { "name": "PHF3", "type": "recommended", "evidence": [ { "id": "A0A287B6Q0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B6Q0" } ] }, { "name": "PHF3", "type": "synonym", "evidence": [ { "id": "XP_020944947", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020944947" } ] } ], "protein_names": [ { "name": "PHD finger protein 3 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020944947", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020944947" } ] }, { "name": "PHD finger protein 3", "type": "synonym", "evidence": [ { "id": "A0A287B6Q0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B6Q0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B6Q0", "url": "https://www.uniprot.org/uniprotkb/A0A287B6Q0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PHF3", "url": "https://www.uniprot.org/uniprotkb/A0A287B6Q0", "locus": { "chromosome": "1", "start_pos": 45296401, "end_pos": 45219448, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000035259", "url": "https://www.ensembl.org/id/ENSSSCG00000035259" } ] } } ], "crossref": [ { "id": "ENSSSCG00000035259", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000035259", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd15638", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd15638", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd21548", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd21548", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "110260283", "url": "https://www.ncbi.nlm.nih.gov/gene/110260283", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001965", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001965", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003618", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003618", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011011", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011011", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012921", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012921", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019786", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019786", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019787", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019787", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036575", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036575", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:110260283", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110260283", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RQPERCQ", "url": "https://omabrowser.org/oma/group/RQPERCQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287B6Q0", "url": "https://www.orthodb.org/?gene=A0A287B6Q0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11477", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11477", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11477:SF10", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11477:SF10", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00628", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00628", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07500", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07500", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07744", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07744", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020944947", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020944947", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B6Q0", "url": "https://www.uniprot.org/uniprotkb/A0A287B6Q0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6Q0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6Q0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDIVDTFNHLIPTEHLDDALFLGSNLENEVCEDFSTSQNVLEDSLKNMLSDKDPMLGSASNQFCLPVLDSNDPNFQMPCSTVVGLDDIMDEGVVKESGNDTIDEEELILPNRNLRDKVEENSVRSPRKSPRLMAQEQVRSLRQSTIAKRSNAAPLNSTKKASGKTVSAPKAGVKQPERCQVKEEVGASPKLEHHKESRRSSRHAGQMEAAVSSCLEMQDEAGIDSEQKCNNQGEANMPSHELNCPLLSETCVSIEEKKNEAQMECQTKTVSNPFFKLPDKEEHERNDSISGKMEGTIVEELKAKGEVEQESKIVRVSHEDDHVIDEPASSAAFSGDAAYTNPSKIEENLVGLSGSVDEANECSLELKNTMEVADKAENPLQRNEIEALAYCKDTESNDKQLEGTRFNKSNLEVVNTGALEPESNTVDNAIYDTPDQSSKQLNIVESIKMESHETANLQNDRDSLSSSNSCLESKSIKSKHTKPSVHSKQTVASDAQKKTVTAKHELIPNKTKVNVKSVKRNADESESKQNFHRPVKVRKKQVDKASNIQSCNSGVKSVKNQAHSVFKKTSQDQNLVQISKPLTHSLSDKPHGHPSCSKEPHHSAQTGHLLHSNQKQCHKPQQLAPAVKTNSHVKEEPEHTGGVEHFKEEDKLKFKKPEKNLQPRQRRSSKSFSLDEPPLFIPDNIATIKREGSDHSSSFESKYMWTPSKQCGFCKKPHGNRFMVGCGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVKCCAEEDKKSEIVDPDILGNQAKVEVHSEDKAMEYEKLGLSKHTTTNDKTKCVDDTVKHKVKILKRESGEGKSSSDCRDSEIKKWQLAPLRKMGQPVLPRRSSEEKGEKIPKESTTVICTGEKASKPGAHEKQEIKKKKMEKGTPSVHPPAAPAPKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLRGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQREVERRPITKITHKGEIEIESDAPMKEQEAGMEIQEPTANRSMEKTEGSEKPREEIDSMSKDTTSQHRQHLFDLNCKICIGRMAPPVDDLSPKKVKVVVGVSRKHSDNEAESIADALSSTSNILASEFFEEEKQESPKSTFSPAPRPEMPGTVEVESTFLARLNFIWKGFINMPSVAKFVTKAYPVSGSPEYLTEDLPDSIQVGGRISPQTVWDYVEKIKASGTKEICVVRFTPVTEEDQISYTLLFAYFSSRKRYGVAANNMKQVKDMYLIPLGATDKIPHPLVPFDGPGLELHRPNLLLGLIIRQKLKRQHSATAGTSHTAETPESVPATLPPDKKSKIEVSTEEAPEEENDFFNSFTTVLHKQRNKPQQALQEDLPAVIEPLVEVTKQEPPKPLRFLPGVLIGWENQPSTLELANKPLPVDDILQSLLGTTGQVYEQAQSGLEQNTLKEIPFLNEQANPKIEKIDTAEAADDEAKEVKVKGENLSESTGDSVEGGEEAPGMGASSVSPGPLTGLSLRGKPPDVSTEAFLTNLSIQSKQEETVESKEKALKRQLPQDQETNLQDNRTSNTSSPCRSVVGKGNIDGSASCSESLVAHTTRSPQFINLKRDPRQAAGRSQQAPPTESTDGESCQNGEKHPVPGPPHQEHLTEQSSVEEKLPSVEKNSCVQQSDDSGVVQNSPSVENIHTSQTEQAKPLQEDTVMQNIETVHPFRRGSAAASHFEVGNTCQSEFPSKSISFTSRSTSPRTSANFSPIRPQQPNLQHLKSSPPGFPFPGPPNFPPQSMFGFPPHLPPPLLPPPGFGFAQNPMVPWPPVVHLAGQQQRMMGPLSQASRYIGPQNFYQVKDIRRPERRHSDPWGRQDQPQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEPESERHRRRDRAQDKERDRKSRDEGHKGKERARLSHGDRGADGRASRDSRSVDRKPDKPKSEDQERDKEREKSKHREGEKDRDRHHKDRDHADRAKSKR", "length": 2032, "header": "tr|A0A287B6Q0-1|A0A287B6Q0_PIG Isoform 1 of PHD finger protein 3 OS=Sus scrofa OX=9823 GN=PHF3 PE=4 SV=1 CANONICAL=A0A287B6Q0-1" }, "isoforms": [ { "isoform_ac": "A0A287B6Q0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6Q0/entry", "sequence": { "sequence": "MDIVDTFNHLIPTEHLDDALFLGSNLENEVCEDFSTSQNVLEDSLKNMLSDKDPMLGSASNQFCLPVLDSNDPNFQMPCSTVVGLDDIMDEGVVKESGNDTIDEEELILPNRNLRDKVEENSVRSPRKSPRLMAQEQVRSLRQSTIAKRSNAAPLNSTKKASGKTVSAPKAGVKQPERCQVKEEVGASPKLEHHKESRRSSRHAGQMEAAVSSCLEMQDEAGIDSEQKCNNQGEANMPSHELNCPLLSETCVSIEEKKNEAQMECQTKTVSNPFFKLPDKEEHERNDSISGKMEGTIVEELKAKGEVEQESKIVRVSHEDDHVIDEPASSAAFSGDAAYTNPSKIEENLVGLSGSVDEANECSLELKNTMEVADKAENPLQRNEIEALAYCKDTESNDKQLEGTRFNKSNLEVVNTGALEPESNTVDNAIYDTPDQSSKQLNIVESIKMESHETANLQNDRDSLSSSNSCLESKSIKSKHTKPSVHSKQTVASDAQKKTVTAKHELIPNKTKVNVKSVKRNADESESKQNFHRPVKVRKKQVDKASNIQSCNSGVKSVKNQAHSVFKKTSQDQNLVQISKPLTHSLSDKPHGHPSCSKEPHHSAQTGHLLHSNQKQCHKPQQLAPAVKTNSHVKEEPEHTGGVEHFKEEDKLKFKKPEKNLQPRQRRSSKSFSLDEPPLFIPDNIATIKREGSDHSSSFESKYMWTPSKQCGFCKKPHGNRFMVGCGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVKCCAEEDKKSEIVDPDILGNQAKVEVHSEDKAMEYEKLGLSKHTTTNDKTKCVDDTVKHKVKILKRESGEGKSSSDCRDSEIKKWQLAPLRKMGQPVLPRRSSEEKGEKIPKESTTVICTGEKASKPGAHEKQEIKKKKMEKGTPSVHPPAAPAPKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLRGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQREVERRPITKITHKGEIEIESDAPMKEQEAGMEIQEPTANRSMEKTEGSEKPREEIDSMSKDTTSQHRQHLFDLNCKICIGRMAPPVDDLSPKKVKVVVGVSRKHSDNEAESIADALSSTSNILASEFFEEEKQESPKSTFSPAPRPEMPGTVEVESTFLARLNFIWKGFINMPSVAKFVTKAYPVSGSPEYLTEDLPDSIQVGGRISPQTVWDYVEKIKASGTKEICVVRFTPVTEEDQISYTLLFAYFSSRKRYGVAANNMKQVKDMYLIPLGATDKIPHPLVPFDGPGLELHRPNLLLGLIIRQKLKRQHSATAGTSHTAETPESVPATLPPDKKSKIEVSTEEAPEEENDFFNSFTTVLHKQRNKPQQALQEDLPAVIEPLVEVTKQEPPKPLRFLPGVLIGWENQPSTLELANKPLPVDDILQSLLGTTGQVYEQAQSGLEQNTLKEIPFLNEQANPKIEKIDTAEAADDEAKEVKVKGENLSESTGDSVEGGEEAPGMGASSVSPGPLTGLSLRGKPPDVSTEAFLTNLSIQSKQEETVESKEKALKRQLPQDQETNLQDNRTSNTSSPCRSVVGKGNIDGSASCSESLVAHTTRSPQFINLKRDPRQAAGRSQQAPPTESTDGESCQNGEKHPVPGPPHQEHLTEQSSVEEKLPSVEKNSCVQQSDDSGVVQNSPSVENIHTSQTEQAKPLQEDTVMQNIETVHPFRRGSAAASHFEVGNTCQSEFPSKSISFTSRSTSPRTSANFSPIRPQQPNLQHLKSSPPGFPFPGPPNFPPQSMFGFPPHLPPPLLPPPGFGFAQNPMVPWPPVVHLAGQQQRMMGPLSQASRYIGPQNFYQVKDIRRPERRHSDPWGRQDQPQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEPESERHRRRDRAQDKERDRKSRDEGHKGKERARLSHGDRGADGRASRDSRSVDRKPDKPKSEDQERDKEREKSKHREGEKDRDRHHKDRDHADRAKSKR", "length": 2032, "header": "tr|A0A287B6Q0-1|A0A287B6Q0_PIG Isoform 1 of PHD finger protein 3 OS=Sus scrofa OX=9823 GN=PHF3 PE=4 SV=1 CANONICAL=A0A287B6Q0-1" }, "locus": { "chromosome": "1", "start_pos": 45294334, "end_pos": 45232859, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040949.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040949.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051752.1", "url": "https://www.ensembl.org/id/ENSSSCP00000051752.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B6Q0", "url": "https://www.uniprot.org/uniprotkb/A0A287B6Q0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:110260283", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110260283", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2MXV8-1", "protein_name": "PHD finger protein 3 isoform X1", "gene_name": "Phf3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDIVDTFNHLIPTEHLDDALFLGSNLENEVCEDFSTSQNVLEDSLKNMLSDKDPMLGSASNQFCLPVLDSNDPNFQMPCSTVVGLDDIMDEGVVKESGNDTIDEEELILPNRSLRDRVEDNSVRSPRKSPRLMAQEQVRSLRQSTIAKRSNAAPLSTKKPPGKTVSSPKVGVKPSERCQSKEDLYTALKSEYPKENRRSSRHAEPIDVVPEVSASSVDSSVSPCVEMKDEAELDSKHACNNNQGELNVPSHELNCPLLSESCASVEEKKNETLMECKSKTDCSPLFKFSDKEEEQNDVVSGEMDDTIEERSAVGKLEQEAEEIKLPCEGDQMTEEPGPSDVFSDSACTDKNRTEKNEAAECHLELKSTVALGDKAENSLQRNQMETSLGYCEDMASNDVQLQSTEFHKSNLEDVDTCAFEPESTTLENTICDVPDQNSKQLNITQSIKVDSHETADLQDDRSSLEPKSIKSKHIKSNAKQSMTTETPRKTVAVKHEVVHSKTKSNVKSVKRNADEPEPQHDLQRPVKVRKGQLEKDLKNQSCNSGVKSVKSQAHSVLKKTSQDQNVMQVSKPLTHSLSDKLHGHSGSSKEPHPVAQSGHSLHSSQKLSHKPQQQAPVVKATSHGKDEHEHPGSEHLKEEDKLKLKKPEKNLQPRQRRSSRSFSLDEPPLFIPDNIATVKREGSDHTSSVESKYMWTPSKQCGFCKKPHGNRFMVGCGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVRCCAEEDKKTDISDTDILEDQTTVEAHSEEKTMECEKLGSSKHMVANDKNKYMDDAVKHKVKILKRESGEGKTSSDSRDNDIKKWQLAPLRKLGQPALPRRSSEEKGEKTHKESTANTCTVEKASKSGTHEKQEMKKKKIEKGGPHVHPPAAASKPSADQIRQSVRHSLKDILMRRLTDSNLKVPEEKAAKVATKIEKELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQREVERRPITKITHKGEIEIESDAPMKEQEATMEMQEPSANKSLEKTEGSEKQKEEVDSTSKDTTSQHRQHLFDLNCKICIGRMAPPVDDLSPKNVKVVVGGARKHSDNEAESIADALSSTTNILASEFFEEEKQESPKSTFSPAPRPEMPGTVEVESTFLARLNFIWKGFINMPSVAKFVTKAYPVSGSPEYLTEDLPDSIQVGGRISPQTVWDYVEKIKASGTKEICVVRFTPVTEEDQISYTLLFAYFSSRKRYGVAANNMKQVKDMYLIPLGAADKIPHPLVPFDGPGLELHRPNLLLGLIIRQKLKRPHSASAGPSHTTETPETAPVALPPDKKGKMESSMEETAEEENDFFNSFTTVLHKQRNKPLQSLQEDLPTTAEPLMEVSRQEPPKPLRFLPGVLIGWENQPSTLELANKPLPVDDILQSLLGTTGQVFEQAQPVGEQSTLKEIPFISDQTSPKLEKIDKVEVTEGEAKEIKVKVDNSSESTGKNSGVEETSLVGSSSISPGPLTSLSLRGKPPDVSTEAFLTNLSKQEETVENKERTLKRQLLQEQESTLQDNRTSNNSPCRPSTGKGNIDGSAGCSESLIANTRSPQFINLKRDPRQAAGRSQQTTSESKEAESCRNGDKNALPGPSHSKEPLAEPVSGEGKLSSVEKNSCVEQNDDSEAAQNPSSVENLNSSQTEQANPLQEDILTQNIETVNPFRRGSATASSHFEAGSTCQSEFPSKSINFTSRSTSPRASASFSSMRPQQPSVQHLKSSPPGFPFPAPPNFPPQSVFGFPPHLPPPLLPPPGFGFPQNPMVPWPPVHLPGQPQRMMGPLSQASRYMGPQNFYQVKDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHDKEWEQESERHRHRDRSQDRDRKSKEEGHKERARVSHSDGTTDGKAGRESKNADKKPDHEKEKEREKNKHREGDKDRERYRKDRDHTDRAKSKR", "length": 2005 }, "evidence": [ { "id": "A0A287B6Q0", "url": "https://omabrowser.org/oma/group/A0A287B6Q0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8V0X5R8-1", "protein_name": "PHD finger protein 3", "gene_name": "PHF3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MIFFLSFYRAERHTGLFMDIVDTFNHLIPTEHLDDALFLGSNPENEVCEDFSTSQSVLEDSLKNMLSDKDPMLGSASAQFCLPVLDSNDPNFQMPCSTVVGLDDIMDEEGVKESGNDAIDEDELTVHNRNLRSRLEETSVASPRKSPRLMAQEPVRSLRQSTLAKRSNIAPVASTKKSAVKSGSATKTGQRQQEKSPAKEAGVATPLKVEQPKEVRRSTRRSGQTEGTVVASQSTKSIPGPDEIHEVKSEPLEQAKVEETSQELSSNSGGACSLPEETKEISEIATKAESGNFDSVCSADPEITALNDKANDVNDSMGSEASSEEKTENKTVELEKITEEQSGLTGKTNDPSSVCVNQSEIDETFSNLSGSVEDGVECRLGSCSVEVHDENTLSVKECVTEPVDDGKGLEKTVTLSEKLLDSTEFDNKDLKSEEFTSVDPGNSILESNVLDHTSQNVRQQINSTKVEDSDSLKFQVDDKQINIPSKCEKNMKPRHSKFVVENKQNMTVGIEQKSSTTQQDVKHSRTRADFAVSSLHSSSSASLKRNADEQESHQHPNNPVKIRKKQTDLALKAKSHLTAATVKKQSNTMLKKIPRVQASGLVHKSSVQRVIEKSTQSSSKDTHHSGHPVPGHISNLGQKQVQKHQLASVLKTNSSTKEELEAKDAPMVEHVKEDDKEKNKPKRTDKNLQPRQRRSSKSLSLDEPPLFIPDNISTVKREGLEHTPASESKHVWVPNKQCGFCKKPHGNRFMVGCGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVKCCAEEDKKAECLDQSVLDTQVKIDSNKEEKTIEYEKPGMSKQGPTCNLNVGTEKGKQTEDTGKHKVKIFKRESGDGKNLSESRDSDTKKGQHVPARKVSQTAVIPRRSSEEKGEKISKESLSVVEKSTKSGVHEKQEIKKKKNEKGPISATHLPNVPASKPSADQIRHSVKQSLKEILMKRLTDSSLKIPEERAAKVATRIERELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAWRQRENRHTIEMIEKEQREVERRPITKITHKGEIEIESETPMKEQEVMEIQEPNMMKLHEKSEEAEKDKEGNESASPDTTSQHKNHLFDLNCKICIGRMAPPTDDDLSAKKVKVSVGVARKQSDNEAESIADALSSTSCILASELLEDDKQDSSKSSFPTLPKSETPGTVECESLFLARLNFIWKGFINMPSVAKFVIKAYPVSGSFEYLTEDLPDSIQVGGRISPHTVWEYVEKIKASGTKEICVVRFTPVTEEDQISYALLFAYFSSRKRYGVAANNMKQVKDLYLIPLGSSDKVPHHLVPFDGPGIEIHRPNLLLGLIIRQKMKRQISAVTSVTSSFVDEVSESTLSSVPPEKKSKPSKPEVSHNELALEEEEENDFFNSFTTVLHKQRNKPQQSNIEDVPAVIEPLVESTKHEPPKPLRFLPGVLVGWENQPSTLELANKPLPVDDILQSLLGTTGQVSEQSKPEASPSEDIPLLNEQATLKEENMDVDEVTAEVSETKASSDDTQESTNATVGPADAAVVGSSSATRNAGTLLGLSLKGKPPDVSTEAFLANLSAQSQNKETEESKENDSKWQIPDKDNVTQEIRRTTNSSFSSSSNAGKSNENNTNVSSVEGTTGNTSKSPPFINLKRDPRQAAGRNQQTNASESKEGDVSKNEDQQVVSGNDQVEPENKQSSGEIGLSLYPSDAQTNEMQYSSTATKTDNACASQVEDTKQSQEDAMQNIEALNSFRRGPAATSSHFETENSSCSEFISKVPSPVTGGNFSSVRPPQQNFQHPKSNPPGFQFQAPAPPNFPPQNSPMFGFPPHLPPQLLPPPGFGFPQNPMMPWPPVGHLSGQPPPYTGPIAQGLPVAHKQSRFVGPENFFQSKDNRRPERRHSDPWGRQEQHVERGFSRGKNDQQRQRFYSDSHHQKKERHEKDWNNEKYWEQDSERNRRRDRNQEKERERKSREEGHRDKERLRLPHSDRGADGKSPRETRNPEKKTEKPKPEEQAQEKDKEREKSKEKHRERESEKSRDRHRDHSDRSKSKR", "length": 2082 }, "evidence": [ { "id": "A0A287B6Q0", "url": "https://omabrowser.org/oma/group/A0A287B6Q0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q92576-1", "protein_name": "PHD finger protein 3", "gene_name": "PHF3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDIVDTFNHLIPTEHLDDALFLGSNLENEVCEDFSASQNVLEDSLKNMLSDKDPMLGSASNQFCLPVLDSNDPNFQMPCSTVVGLDDIMDEGVVKESGNDTIDEEELILPNRNLRDKVEENSVRSPRKSPRLMAQEQVRSLRQSTIAKRSNAAPLSNTKKASGKTVSTAKAGVKQPERSQVKEEVCMSLKPEYHKENRRCSRNSGQIEVVPEVSVSSSHSSVSSCLEMKDEDGLDSKHKCNNPGEIDVPSHELNCSLLSETCVTIGEKKNEALMECKAKPVGSPLFKFSDKEEHEQNDSISGKTGETVVEEMIATRKVEQDSKETVKLSHEDDHILEDAGSSDISSDAACTNPNKTENSLVGLPSCVDEVTECNLELKDTMGIADKTENTLERNKIEPLGYCEDAESNRQLESTEFNKSNLEVVDTSTFGPESNILENAICDVPDQNSKQLNAIESTKIESHETANLQDDRNSQSSSVSYLESKSVKSKHTKPVIHSKQNMTTDAPKKIVAAKYEVIHSKTKVNVKSVKRNTDVPESQQNFHRPVKVRKKQIDKEPKIQSCNSGVKSVKNQAHSVLKKTLQDQTLVQIFKPLTHSLSDKSHAHPGCLKEPHHPAQTGHVSHSSQKQCHKPQQQAPAMKTNSHVKEELEHPGVEHFKEEDKLKLKKPEKNLQPRQRRSSKSFSLDEPPLFIPDNIATIRREGSDHSSSFESKYMWTPSKQCGFCKKPHGNRFMVGCGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVKCCAEEDKKTEILDPDTLENQATVEFHSGDKTMECEKLGLSKHTTNDRTKYIDDTVKHKVKILKRESGEGRNSSDCRDNEIKKWQLAPLRKMGQPVLPRRSSEEKSEKIPKESTTVTCTGEKASKPGTHEKQEMKKKKVEKGVLNVHPAASASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQREVERRPITKITHKGEIEIESDAPMKEQEAAMEIQEPAANKSLEKPEGSEKQKEEVDSMSKDTTSQHRQHLFDLNCKICIGRMAPPVDDLSPKKVKVVVGVARKHSDNEAESIADALSSTSNILASEFFEEEKQESPKSTFSPAPRPEMPGTVEVESTFLARLNFIWKGFINMPSVAKFVTKAYPVSGSPEYLTEDLPDSIQVGGRISPQTVWDYVEKIKASGTKEICVVRFTPVTEEDQISYTLLFAYFSSRKRYGVAANNMKQVKDMYLIPLGATDKIPHPLVPFDGPGLELHRPNLLLGLIIRQKLKRQHSACASTSHIAETPESAPPIALPPDKKSKIEVSTEEAPEEENDFFNSFTTVLHKQRNKPQQNLQEDLPTAVEPLMEVTKQEPPKPLRFLPGVLIGWENQPTTLELANKPLPVDDILQSLLGTTGQVYDQAQSVMEQNTVKEIPFLNEQTNSKIEKTDNVEVTDGENKEIKVKVDNISESTDKSAEIETSVVGSSSISAGSLTSLSLRGKPPDVSTEAFLTNLSIQSKQEETVESKEKTLKRQLQEDQENNLQDNQTSNSSPCRSNVGKGNIDGNVSCSENLVANTARSPQFINLKRDPRQAAGRSQPVTTSESKDGDSCRNGEKHMLPGLSHNKEHLTEQINVEEKLCSAEKNSCVQQSDNLKVAQNSPSVENIQTSQAEQAKPLQEDILMQNIETVHPFRRGSAVATSHFEVGNTCPSEFPSKSITFTSRSTSPRTSTNFSPMRPQQPNLQHLKSSPPGFPFPGPPNFPPQSMFGFPPHLPPPLLPPPGFGFAQNPMVPWPPVVHLPGQPQRMMGPLSQASRYIGPQNFYQVKDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSKR", "length": 2039 }, "evidence": [ { "id": "A0A287B6Q0", "url": "https://omabrowser.org/oma/group/A0A287B6Q0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A287B6Q0", "url": "https://www.uniprot.org/uniprotkb/A0A287B6Q0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A287B6Q0", "url": "https://www.uniprot.org/uniprotkb/A0A287B6Q0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A287B6Q0", "url": "https://www.uniprot.org/uniprotkb/A0A287B6Q0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1075, "end_pos": 1077, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1521, "end_pos": 1523, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1569, "end_pos": 1571, "annotation": "n_glycosylation_sequon" }, { "start_pos": 156, "end_pos": 158, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1602, "end_pos": 1604, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1606, "end_pos": 1608, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1787, "end_pos": 1789, "annotation": "n_glycosylation_sequon" }, { "start_pos": 286, "end_pos": 288, "annotation": "n_glycosylation_sequon" }, { "start_pos": 407, "end_pos": 409, "annotation": "n_glycosylation_sequon" }, { "start_pos": 509, "end_pos": 511, "annotation": "n_glycosylation_sequon" }, { "start_pos": 99, "end_pos": 101, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287B6Q0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B6Q0" }, { "id": "PS50016", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50016" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PHD-type", "eco_id": "ECO_0000259", "start_pos": 708, "end_pos": 763, "start_aa": "Ser", "end_aa": "Glu", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A287B6Q0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B6Q0" }, { "id": "PS51321", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51321" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "TFIIS central", "eco_id": "ECO_0000259", "start_pos": 920, "end_pos": 1039, "start_aa": "Ile", "end_aa": "Glu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1075, "end_pos": 1077 }, { "start_pos": 1521, "end_pos": 1523 }, { "start_pos": 1569, "end_pos": 1571 }, { "start_pos": 156, "end_pos": 158 }, { "start_pos": 1602, "end_pos": 1604 }, { "start_pos": 1606, "end_pos": 1608 }, { "start_pos": 1787, "end_pos": 1789 }, { "start_pos": 286, "end_pos": 288 }, { "start_pos": 407, "end_pos": 409 }, { "start_pos": 509, "end_pos": 511 }, { "start_pos": 99, "end_pos": 101 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 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"sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B6X6-1", "uniprot_ac": "A0A287B6X6", "uniprot_id": "A0A287B6X6_PIG", "mass": { "chemical_mass": 60098.0, "monoisotopic_mass": 60098.0 }, "refseq": { "ac": "XP_020948226", "name": "transmembrane protein 117 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020948226" }, "gene_names": [ { "name": "TMEM117", "type": "recommended", "evidence": [ { "id": "A0A287B6X6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B6X6" } ] }, { "name": "TMEM117", "type": "synonym", "evidence": [ { "id": "XP_020948226", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020948226" } ] } ], "protein_names": [ { "name": "Transmembrane protein 117", "type": "synonym", "evidence": [ { "id": "A0A287B6X6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B6X6/entry#names_and_taxonomy" } ] }, { "name": "transmembrane protein 117 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020948226", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020948226" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B6X6", "url": "https://www.uniprot.org/uniprotkb/A0A287B6X6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TMEM117", "url": "https://www.uniprot.org/uniprotkb/A0A287B6X6", "locus": { "chromosome": "5", "start_pos": 75406367, "end_pos": 74917463, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000801", "url": "https://www.ensembl.org/id/ENSSSCG00000000801" } ] } } ], "crossref": [ { "id": "ENSSSCG00000000801", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000801", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100524623", "url": "https://www.ncbi.nlm.nih.gov/gene/100524623", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR029370", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029370", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100524623", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524623", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QMIFKEE", "url": "https://omabrowser.org/oma/group/QMIFKEE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287B6X6", "url": "https://www.orthodb.org/?gene=A0A287B6X6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31226", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31226", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31226:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31226:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15113", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15113", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020948226", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020948226", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B6X6", "url": "https://www.uniprot.org/uniprotkb/A0A287B6X6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6X6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6X6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TSD6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TSD6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TSD6-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TSD6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGKDFRYYFQHPWSRMIVAYLVIFFNFLIFAEDPVSHSQTEANVIVVGNCFSFVTNKYPRGVGWRLLKVLLWLLAILIGLIAGKFLFHQRLFGQLLRLKMFREDHGSWMTMFFSTILFLFIFSHIYNTILLMDGNMGAYIITDYMGIRNESFMKLAAVGTWMGDFVTAWMVTDMMLQDKPYPDWGKSARAFWKKGNVRIILFWTVLFTLTSVVVLVITTDWISWDKLNRGFLPSDEVSRAFLASFILVFDLLIVMQDWEFPHFMGDVDVNLPGLHTPHMQFKIPFFQKIFKEEYHIHITGKWFNYGIIFLVLILDLNMWKNQIFYKPHEYGQYIGPGQKIYTVKDSESLKDLNRTKLSWEWRSNHTNPRTNKTYVEGDMFLHSRFIGASLDVKCLAFVPSLIAFVWFGFFIWFFGRFLKNEQGMENQDKTYTRMKRKSPSEHSKDMGITRENTQASVEDPLNDPALVCIRSDFNEIVYKSSHLTSENLSSHLNESTSATEADPEPTTSKSTPTN", "length": 514, "header": "tr|A0A287B6X6-1|A0A287B6X6_PIG Isoform 1 of Transmembrane protein 117 OS=Sus scrofa OX=9823 GN=TMEM117 PE=4 SV=1 CANONICAL=A0A287B6X6-1" }, "isoforms": [ { "isoform_ac": "A0A287B6X6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6X6/entry", "sequence": { "sequence": "MGKDFRYYFQHPWSRMIVAYLVIFFNFLIFAEDPVSHSQTEANVIVVGNCFSFVTNKYPRGVGWRLLKVLLWLLAILIGLIAGKFLFHQRLFGQLLRLKMFREDHGSWMTMFFSTILFLFIFSHIYNTILLMDGNMGAYIITDYMGIRNESFMKLAAVGTWMGDFVTAWMVTDMMLQDKPYPDWGKSARAFWKKGNVRIILFWTVLFTLTSVVVLVITTDWISWDKLNRGFLPSDEVSRAFLASFILVFDLLIVMQDWEFPHFMGDVDVNLPGLHTPHMQFKIPFFQKIFKEEYHIHITGKWFNYGIIFLVLILDLNMWKNQIFYKPHEYGQYIGPGQKIYTVKDSESLKDLNRTKLSWEWRSNHTNPRTNKTYVEGDMFLHSRFIGASLDVKCLAFVPSLIAFVWFGFFIWFFGRFLKNEQGMENQDKTYTRMKRKSPSEHSKDMGITRENTQASVEDPLNDPALVCIRSDFNEIVYKSSHLTSENLSSHLNESTSATEADPEPTTSKSTPTN", "length": 514, "header": "tr|A0A287B6X6-1|A0A287B6X6_PIG Isoform 1 of Transmembrane protein 117 OS=Sus scrofa OX=9823 GN=TMEM117 PE=4 SV=1 CANONICAL=A0A287B6X6-1" }, "locus": { "chromosome": "5", "start_pos": 75402494, "end_pos": 74926301, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037269.2", "url": "https://www.ensembl.org/id/ENSSSCT00000037269.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052277.1", "url": "https://www.ensembl.org/id/ENSSSCP00000052277.1" } ] } }, { "isoform_ac": "A0A4X1TSD6-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TSD6/entry", "sequence": { "sequence": "MGKDFRYYFQHPWSRMIVAYLVIFFNFLIFAEDPVSHSQTEANVIVVGNCFSFVTNKYPRGVGWRLLKVLLWLLAILIGLIAGKFLFHQRLFGQLLRLKMFREDHGSWMTMFFSTILFLFIFSHIYNTILLMDGNMGAYIITDYMGIRNESFMKLAAVGTWMGDFVTAWMVTDMMLQDKPYPDWGKSARAFWKKGNVRIILFWTVLFTLTSVVVLVITTDWISWDKLNRGFLPSDEVSRAFLASFILVFDLLIVMQVNGLTMELSSWS", "length": 268, "header": "tr|A0A4X1TSD6-1|A0A4X1TSD6_PIG Computationally mapped isoform of Transmembrane protein 117 OS=Sus scrofa OX=9823 GN=TMEM117 PE=4 SV=1 CANONICAL=A0A287B6X6-1" }, "locus": { "chromosome": "5", "start_pos": 75401886, "end_pos": 74926301, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000868.5", "url": "https://www.ensembl.org/id/ENSSSCT00000000868.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000851.4", "url": "https://www.ensembl.org/id/ENSSSCP00000000851.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B6X6", "url": "https://www.uniprot.org/uniprotkb/A0A287B6X6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100524623", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524623", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "E1C195-1", "protein_name": "Transmembrane protein 117", "gene_name": "TMEM117", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MDKDFRYYFQHPWSRLVVAYLVIFFNFLIFAEDPVSHSQTEANVIVVGNCFSFVTNKYPESGGWRCLKVLLWLLAILTGLIAGKFLFHQRLFGQLLRLKMFREDHGSWMTMFFSTILFLFIFSHIYNLFLIMAGNMSAYIITDFMGIRNENFMKVAAVGTWMGDFVTAWMVTDMMLQDKPYPDWGKSARAFWKKGNVRIILFWTVLFTLTSVVVLVITTDWISWDKLNRGFLPSDEVSRAFLASFILVFDLLIVMQDWEFPHFMGDVEVNLPGLPSAHMQFKVPYFQKILKEEYHIHITGKWFNYGIIFLVLILDLNMWKNQIFYKPHEYGQYIGPGQKIYTVKDSESLKDLNRTKLSWEWRSNNTNPLTNRTYAEGDMFLHSRYIGSSLDVKCLAFIPSLLAFALFGFFIWFFGRFQKTDQGMENLDKSYTRMKRKSPSDMGMTRENTQVLVEEPSSFQEPHLVSIKSDLSEIVFNSSLLTSENLNAQLSEQDSPLQPVPESVVPKSNPTT", "length": 512 }, "evidence": [ { "id": "A0A287B6X6", "url": "https://omabrowser.org/oma/group/A0A287B6X6/", "database": "OMA" } ], "glygen_name": "Chicken", 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"evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000037232", "url": "https://www.ensembl.org/id/ENSSSCG00000037232" } ] } } ], "crossref": [ { "id": "A0A287B757", "url": "https://alphafold.ebi.ac.uk/entry/A0A287B757", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000037232", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000037232", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07277", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07277", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd17689", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd17689", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001683", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001683", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004012", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004012", "database": "InterPro", 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"MSGSQNNDMKRQFLLERLLDAVKQCQIRFGGRKEIASDSDSRVTCLCAQFEAVLQHGLKRSRGLALTAAAIKQAAGFASKTETEPVFWFYVKEVLSRHELQRFYALRHIASDAGRGRAWLRCALNEHSLERYLHSLLADRARLSTFYEDWAFVMDEERSSMLPTMAAGLNSILFAINIDNTDLNGQSKFAPTVSDLLKESTQNVTSLLKESTQGVSSLFREITASSAVSILIKPEQESDPLPVVSTHTSADTKCKKERKKKKKVTNIISFDDEDDEQSSGDVFVRKIPGAGESSEENSDRSSINIMSAFESPFGPNSNGSQSSNSWKIDSLSLNGELGYQKLDVKSIDDEDVDENEDDAYGNTPGRKRPSHSESPEKPLDGSACLSQMHAWAPLQVLHGDADVLFPVSGVGSYGPTDAPLGSLENGTGPEDHVLPEPGPRYSVEASPPSQGSPLSGLLPPTSVPESMTVSELRQAIVAMMNRKDELEEENRSLRNLLDGEMEHSAALRQEVDTFKRRVAEQEERHITKVQALTRENEVLKVQLKKYVGAVQMLKREGHAAEVPNLWNVDGEVAVTEQKPGEVSEELASSYERKLIEVAEMHGELIEFNERLHRALVAKEALVSQMRQELIDLRGPVPGDLSQTSEDQSLSDFEISNRALINVWIPSVFLRGKAANAFHVYQVYIRIKDDEWNIYRRYTEFRSLHHKLQNKYPQVRAYNFPPKKAIGNKDAKFVEERRKQLQTYLRNVMNKVIQVVPEFAASPQKETLVQLMPFFLDIAAPGEPLTKNSRPKVASRFPKLSRGHPRETRNVEPQSGDL", "length": 817, "header": "tr|A0A287B757-1|A0A287B757_PIG Isoform 1 of Sorting nexin 29 OS=Sus scrofa OX=9823 GN=SNX29 PE=4 SV=2 CANONICAL=A0A287B757-1" }, "isoforms": [ { 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"MDLPVHRHACRHTSTATPSGAGTHPCASCNLPVTAPLGHVPSRTGAAMPKCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGPKGFGRGGAESHTFK", "length": 124, "header": "tr|A0A5G2QZZ3-1|A0A287B781_PIG Computationally mapped isoform of LIM zinc-binding domain-containing protein OS=Sus scrofa OX=9823 GN=LOC110258364 PE=4 SV=2 CANONICAL=A0A287B781-1" }, "locus": { "chromosome": "AEMK02000452.1", "start_pos": 3512556, "end_pos": 3508930, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091460.2", "url": "https://www.ensembl.org/id/ENSSSCT00000091460.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070469.2", "url": "https://www.ensembl.org/id/ENSSSCP00000070469.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., 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Classification" ] }, { "id": "PF00023", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00023", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12796", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287B790", "url": "https://www.uniprot.org/uniprotkb/A0A287B790", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B790-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B790-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0U6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0U6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0U6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0U6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SBB4", "url": "https://www.uniprot.org/uniprotkb/F1SBB4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SBB4-1", "url": "https://www.uniprot.org/uniprotkb/F1SBB4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MCRMSFKKETPLANAAFWAARRGNLTLLRLLLNSGRVDVDCRDSHGTTLLMVASYAGHIDCVKELVLQGADINLQRESGTTALFFAAQQGHNDVVRFLFEFGASTEFRTKDGGTALLAASQYGHMQVVETLLKHGANIHDQLYDGATALFLAAQGGYLDVIRLLLSSGAKVNQPRQDGTAPLWIASQMGHSEVVRVMLLRGADRDAARNDGTTALLKAANKGYNNVIEELLKFSPTLGILKNGTSALHAAVLSGNIKTVALLLEAGADPALRNKANELPAELTKNERILRLLRSKEGHRKS", "length": 301, "header": "tr|A0A287B790-1|A0A287B790_PIG Isoform 1 of Ankyrin repeat domain 29 OS=Sus scrofa OX=9823 GN=ANKRD29 PE=4 SV=3 CANONICAL=A0A287B790-1" }, "isoforms": [ { "isoform_ac": "A0A287B790-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B790/entry", "sequence": { "sequence": "MCRMSFKKETPLANAAFWAARRGNLTLLRLLLNSGRVDVDCRDSHGTTLLMVASYAGHIDCVKELVLQGADINLQRESGTTALFFAAQQGHNDVVRFLFEFGASTEFRTKDGGTALLAASQYGHMQVVETLLKHGANIHDQLYDGATALFLAAQGGYLDVIRLLLSSGAKVNQPRQDGTAPLWIASQMGHSEVVRVMLLRGADRDAARNDGTTALLKAANKGYNNVIEELLKFSPTLGILKNGTSALHAAVLSGNIKTVALLLEAGADPALRNKANELPAELTKNERILRLLRSKEGHRKS", "length": 301, "header": "tr|A0A287B790-1|A0A287B790_PIG Isoform 1 of Ankyrin repeat domain 29 OS=Sus scrofa OX=9823 GN=ANKRD29 PE=4 SV=3 CANONICAL=A0A287B790-1" }, "locus": { "chromosome": "6", "start_pos": 108517144, "end_pos": 108462113, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062920.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062920.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052385.3", "url": "https://www.ensembl.org/id/ENSSSCP00000052385.3" } ] } }, { "isoform_ac": "A0A5G2R0U6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0U6/entry", "sequence": { "sequence": "MCRMSFKKETPLANAAFWAARRGNLTLLRLLLNSGRVDVDCRDSVRPFGTRMPQAHHPLLARQLLLNTLPFVVLVFLVCWLALSFAKSPAYPEGLQSRPRKPL", "length": 103, "header": "tr|A0A5G2R0U6-1|A0A287B790_PIG Computationally mapped isoform of Ankyrin repeat domain 29 OS=Sus scrofa OX=9823 GN=ANKRD29 PE=4 SV=1 CANONICAL=A0A287B790-1" }, "locus": { "chromosome": "6", "start_pos": 108517144, "end_pos": 108503741, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088480.1", "url": "https://www.ensembl.org/id/ENSSSCT00000088480.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070785.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070785.1" } ] } }, { "isoform_ac": "F1SBB4-1", "url": "https://www.uniprot.org/uniprotkb/F1SBB4/entry", "sequence": { "sequence": "MCRMSFKKETPLANAAFWAARRGNLTLLRLLLNSGRVDVDCRDSHGTTLLMVASYAGHIDCVKELVLQGADINLQRESGTTALFFAAQQGHNDVVRFLFEFGASTEFRTKDGGTALLAASQYGHMQVVETLLKHGANIHDQLYDGATALFLAAQGGYLDVIRLLLSSGAKVNQPRQDGTAPLWIASQMGHSEVVRVMLLRGADRDAARNDGTTALLKAANKGYNNVIEELLKFSPTLGILKANELPAELTKNERILRLLRSKEGHRKS", "length": 268, "header": "tr|F1SBB4-1|A0A287B790_PIG Computationally mapped isoform of Ankyrin repeat domain 29 OS=Sus scrofa OX=9823 GN=ANKRD29 PE=4 SV=3 CANONICAL=A0A287B790-1" }, "locus": { "chromosome": "6", "start_pos": 108517144, "end_pos": 108462113, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004107.5", "url": "https://www.ensembl.org/id/ENSSSCT00000004107.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004015.4", "url": "https://www.ensembl.org/id/ENSSSCP00000004015.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R0U6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0U6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6A693-1", "protein_name": "Ankyrin repeat domain 29", "gene_name": "Ankrd29", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCRMSFKKETPLANAAFWAAKRGNLALLRLLLNSGRVDVDCRDSHGTTLLMVASYAGHIDCVRELVLQGADINLQRESGTTALFFAAQQGHNDVVRFLFGFGASTECRTKDGGTALLAASQYGHMPVVETLLKHGANIHDQLYDGATALFLAAQGGYLDVIRLLLSSGAKVNQPRQDGTAPLWIASQMGHSEVVRVMLLRGADRDAARNDGTTALLKAANKGYNDVIKELLKFSPTLGILKNGTSALHAAVLSGNVKTVALLLEAGADPALRNKANELPAELTKNEHILHLLRQKEGPGKNELGSVLDR", "length": 309 }, "evidence": [ { "id": "A0A287B790", "url": "https://omabrowser.org/oma/group/A0A287B790/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0XNQ1-1", "protein_name": "Ankyrin repeat domain 29", "gene_name": "ANKRD29", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSFKKETPLANAAFWAARKGNLALLQLLLNSGRVDVDCKDSLGTTALMVASYYGHVDCVRELVLQGADINLQRESGATALFFAAQQGHNDVVKFLFEFGASTEFKNKELLWLLSCFVPAVPINVTGNLETHRSYRATDQDGGTALLAACQYGHTKVVETLLKHGANVHDQLYDGASAIFLAAQGGYLDVIRLLLSSGAKVNQPRQDGTAPLWIASQMGHSEVVRVMLLRGAERDAARDDGTTALLKAAIKGYNNVIEELLKFSPTLGLLKNGTSALHAAVLSGNVRTVALLLEAGADPCLRNKANELPAELTKNERILRLLRTKEKQRKS", "length": 330 }, "evidence": [ { "id": "A0A287B790", "url": "https://omabrowser.org/oma/group/A0A287B790/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D3YVV3-1", "protein_name": "Ankyrin repeat domain 29", "gene_name": "Ankrd29", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCRMSFKKETPLANAAFWAAKRGNLALLKLLLNSGRVDVDCRDSHGTTLLMVASYAGHIDCVRELVLQGADINLQRESGTTALFFAAQQGHNDVVRFLFGFGASTECRTKDGGTALLAASQYGHMPVVETLLKHGANIHDQLYDGATALFLAAQGGYLDVIRLLLSSGAKVNQPRQDGTAPLWIASQMGHSEVVRVMLLRGADRDAARNDGTTALLKAANKGYNDVIEELLKFSPTLGILKNGTSALHAAVLSGNVKTVALLLEAGADPALRNKANELPAELTKNERILHLLRQKEGPGKNELGSILDR", "length": 309 }, "evidence": [ { "id": "A0A287B790", "url": "https://omabrowser.org/oma/group/A0A287B790/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q502M6-1", "protein_name": "Ankyrin repeat domain-containing protein 29", "gene_name": "ankrd29", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSFKKETPLANAVFWAARKGNLALLQLLLNSGRVDVDCKDAYGTTALMVASYSGHYECVRELIMQGADINLQRETGSTALFFASQQGHNEIVKLLFEFGASTEFQTKDGGTALCAACQFGHSRVVDTLLKNGANVHDQLNDGATALFLASQEGHVNLIRQLLSSGAKVNQPREDGTAPLWMAAQMGHSEVVKVLLLRGADRDADRKDGSTALFKAAHKGHCSVMEELLKFSPSLGILKNGSTALHAAVMGGSLKAVDLLLKANADPALPNTNNELPRDLTKSERILRVLRLPLMNGES", "length": 298 }, "evidence": [ { "id": "A0A287B790", "url": "https://omabrowser.org/oma/group/A0A287B790/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8N6D5-1", "protein_name": "Ankyrin repeat domain-containing protein 29", "gene_name": "ANKRD29", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MCRMSFKKETPLANAAFWAARRGNLALLKLLLNSGRVDVDCRDSHGTTLLMVAAYAGHIDCVRELVLQGADINLQRESGTTALFFAAQQGHNDVVRFLFGFGASTEFRTKDGGTALLAASQYGHMQVVETLLKHGANIHDQLYDGATALFLAAQGGYLDVIRLLLASGAKVNQPRQDGTAPLWIASQMGHSEVVRVMLLRGADRDAARNDGTTALLKAANKGYNDVIKELLKFSPTLGILKNGTSALHAAVLSGNIKTVALLLEAGADPSLRNKANELPAELTKNERILRLLRSKEGPRKS", "length": 301 }, "evidence": [ { "id": "A0A287B790", "url": "https://omabrowser.org/oma/group/A0A287B790/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VQI1-1", "protein_name": "Ankyrin repeat domain-containing protein 29", "gene_name": "Dmel\\CG3104", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSLKKETPSDVQLHMAAMRGDEVALLRVLDSGKVHVDCKDEDGTTPLILAAAGGHTYCVMELLDQGADPNSRRLTGTTPLFFAAQGGHLDVVKILIKAGASVDTPSADGGTPLFVACQGGHVKIVRELLDCGANVNAHMKDRATPVFISAQNGHRTVLSLLIQAGAEIDIKRIDGATPLWIAAQMGQDHICKVLLQNGANVDTVRCDGATPLFKAAHKGHAAVITVLLKYRPNLGQLPNGESALHAAAMFGHMTVCKQLVAAGSDVLLKNHDGLTALQLAHQQKYTSICDYLQERIRTMVARSAKAMATSGVSSTVKTMSA", "length": 321 }, "evidence": [ { "id": "A0A287B790", "url": "https://omabrowser.org/oma/group/A0A287B790/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 242, "end_pos": 244, "annotation": "n_glycosylation_sequon" }, { "start_pos": 24, "end_pos": 26, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287B790-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 301, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287B790-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287B790" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 242, "end_pos": 244 }, { "start_pos": 24, "end_pos": 26 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B7A4-1", "uniprot_ac": "A0A287B7A4", "uniprot_id": "A0A287B7A4_PIG", "mass": { "chemical_mass": 13157.0, "monoisotopic_mass": 13157.0 }, "refseq": { "ac": "XP_003130967", "name": "ubiquitin-like protein 3 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130967" }, "gene_names": [ { "name": "UBL3", "type": "recommended", "evidence": [ { "id": "A0A287B7A4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B7A4" } ] }, { "name": "UBL3", "type": "synonym", "evidence": [ { "id": "XP_003130967", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130967" } ] } ], "protein_names": [ { "name": "Ubiquitin-like protein", "type": "recommended", "evidence": [ { "id": "A0A287B7A4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B7A4/entry#names_and_taxonomy" } ] }, { "name": "ubiquitin-like protein 3 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_003130967", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130967" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B7A4", "url": "https://www.uniprot.org/uniprotkb/A0A287B7A4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "UBL3", "url": "https://www.uniprot.org/uniprotkb/A0A287B7A4", "locus": {} } ], "crossref": [ { "id": "ENSSSCG00000035992", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000035992", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd17048", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd17048", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100517418", "url": "https://www.ncbi.nlm.nih.gov/gene/100517418", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000626", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000626", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017000", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017000", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029071", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029071", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039540", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039540", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040015", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040015", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047977", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047977", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100517418", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517418", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WPDEWYE", "url": "https://omabrowser.org/oma/group/WPDEWYE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287B7A4", "url": "https://www.orthodb.org/?gene=A0A287B7A4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13169", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13169", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13169:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13169:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13881", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13881", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003130967", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130967", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B7A4", "url": "https://www.uniprot.org/uniprotkb/A0A287B7A4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B7A4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7A4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TKF1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TKF1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TKF1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TKF1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QLM8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLM8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QLM8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLM8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RMM6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RMM6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RMM6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RMM6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F8B0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F8B0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F8B0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F8B0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSNVPADMINLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWPMDWEEEQVSSPNILRLIYQGRFLHGNVTLGALKLPFGKTTVMHLVARETLPEPNSQGQRNREKTGESNCCVIL", "length": 117, "header": "tr|A0A287B7A4-1|A0A287B7A4_PIG Isoform 1 of Ubiquitin-like protein OS=Sus scrofa OX=9823 GN=UBL3 PE=1 SV=3 CANONICAL=A0A287B7A4-1" }, "isoforms": [ { "isoform_ac": "A0A287B7A4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7A4/entry", "sequence": { "sequence": "MSSNVPADMINLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWPMDWEEEQVSSPNILRLIYQGRFLHGNVTLGALKLPFGKTTVMHLVARETLPEPNSQGQRNREKTGESNCCVIL", "length": 117, "header": "tr|A0A287B7A4-1|A0A287B7A4_PIG Isoform 1 of Ubiquitin-like protein OS=Sus scrofa OX=9823 GN=UBL3 PE=1 SV=3 CANONICAL=A0A287B7A4-1" }, "locus": { "chromosome": "11", "start_pos": 6762508, "end_pos": 6700838, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000103890.1", "url": "https://www.ensembl.org/id/ENSSSCT00000103890.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075651.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075651.1" } ] } }, { "isoform_ac": "A0A4X1TKF1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TKF1/entry", "sequence": { "sequence": "LLLNLPSNLINGKTKEFLFSPNDSASDIAKHVYDNWPMDWEEEQVSSPNILRLIYQGRFLHGNVTLGALKLPFGKTTVMHLVARETLPEPNSQGQRNREKTGESNCCVIL", "length": 110, "header": "tr|A0A4X1TKF1-1|A0A4X1TKF1_PIG Computationally mapped isoform of Ubiquitin-like protein 3 OS=Sus scrofa OX=9823 GN=UBL3 PE=1 SV=1 CANONICAL=A0A287B7A4-1" }, "locus": { "chromosome": "11", "start_pos": 6714738, "end_pos": 6700838, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093459.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093459.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075004.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075004.1" } ] } }, { "isoform_ac": "A0A5G2QLM8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLM8/entry", "sequence": { "sequence": "MSSNVPADMINLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWPMDWEEEQVSSPNILRLIYQGRFLHGNVTLGALKLPFGKTTVMHLVADFQPGDKSCESQSSRDMQEPSIQ", "length": 113, "header": "tr|A0A5G2QLM8-1|A0A287B7A4_PIG Computationally mapped isoform of Ubiquitin-like protein OS=Sus scrofa OX=9823 GN=UBL3 PE=1 SV=2 CANONICAL=A0A287B7A4-1" }, "locus": { "chromosome": "11", "start_pos": 6762508, "end_pos": 6692233, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091252.2", "url": "https://www.ensembl.org/id/ENSSSCT00000091252.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064945.2", "url": "https://www.ensembl.org/id/ENSSSCP00000064945.2" } ] } }, { "isoform_ac": "A0A5G2RMM6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RMM6/entry", "sequence": { "sequence": "LLLNLPSNLINGKTKEFLFSPNDSASDIAKHVYDNWPMDWEEEQVSSPNILRLIYQGRFLHGNVTLGARLCPERMRTALSWMTKTKTGVKVWPLTSSPEIRAVRAKALGICKSQASSEPGSKGPKRSGASSLSQNLQLSGFHGRWWKDKRPIKNIQVPFKPPASQGRTSVCSFTISPRMTSGQTQRQGAGDWTLPRGSKDELQTDDALCFKSQAWPLVAGCTGGCALYQGKEVRAVAQVRESSCVQPWIFDSEMSWVPKRQELRRSLA", "length": 268, "header": "tr|A0A5G2RMM6-1|A0A287B7A4_PIG Computationally mapped isoform of Ubiquitin-like protein OS=Sus scrofa OX=9823 GN=UBL3 PE=1 SV=2 CANONICAL=A0A287B7A4-1" }, "locus": { "chromosome": "11", "start_pos": 6714738, "end_pos": 6691339, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089553.2", "url": "https://www.ensembl.org/id/ENSSSCT00000089553.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073874.2", "url": "https://www.ensembl.org/id/ENSSSCP00000073874.2" } ] } }, { "isoform_ac": "A0A8W4F8B0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F8B0/entry", "sequence": { "sequence": "MTRLGKTKEFLFSPNDSASDIAKHVYDNWPMDWEEEQVSSPNILRLIYQGRFLHGNVTLGALKLPFGKTTVMHLVARETLPEPNSQGQRNREKTGESNCCVIL", "length": 103, "header": "tr|A0A8W4F8B0-1|A0A287B7A4_PIG Computationally mapped isoform of Ubiquitin-like protein OS=Sus scrofa OX=9823 GN=UBL3 PE=1 SV=1 CANONICAL=A0A287B7A4-1" }, "locus": { "chromosome": "11", "start_pos": 6714263, "end_pos": 6700838, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000094224.1", "url": "https://www.ensembl.org/id/ENSSSCT00000094224.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075606.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075606.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLM8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLM8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100517418", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517418", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "G3GWG6-1", "protein_name": "Ubiquitin-like protein", "gene_name": "Ubl3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSSHVPADMINLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWPMDWEEEQVSSPNILRLIYQGRFLHGNVTLGALKLPFGKTTVMHLVARETLPEPNSQGQRNREKTGESNCCVIL", "length": 117 }, "evidence": [ { "id": "A0A287B7A4", "url": "https://omabrowser.org/oma/group/A0A287B7A4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "O95164-1", "protein_name": "Ubiquitin-like protein 3", "gene_name": "UBL3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSSNVPADMINLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWPMDWEEEQVSSPNILRLIYQGRFLHGNVTLGALKLPFGKTTVMHLVARETLPEPNSQGQRNREKTGESNCCVIL", "length": 117 }, "evidence": [ { "id": "A0A287B7A4", "url": "https://omabrowser.org/oma/group/A0A287B7A4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q2TA46-1", "protein_name": "Ubiquitin-like protein 3", "gene_name": "UBL3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSSNVPADMINLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWPMDWEEEQVSSPNILRLIYQGRFLHGNVTLGALKLPFGKTTVMHLVARETLPEPNSQGQRNREKTGESNCCVIL", "length": 117 }, "evidence": [ { "id": "A0A287B7A4", "url": "https://omabrowser.org/oma/group/A0A287B7A4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9Z2M6-1", "protein_name": "Ubiquitin-like protein 3", "gene_name": "Ubl3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSHVPADMINLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWPMDWEEEQVSSPNILRLIYQGRFLHGNVTLGALKLPFGKTTVMHLVARETLPEPNSQGQRNREKTGESNCCVIL", "length": 117 }, "evidence": [ { "id": "A0A287B7A4", "url": "https://omabrowser.org/oma/group/A0A287B7A4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A287B7A4", "url": "https://www.uniprot.org/uniprotkb/A0A287B7A4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 29, "end_pos": 31, "annotation": "n_glycosylation_sequon" }, { "start_pos": 70, "end_pos": 72, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287B7A4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B7A4" }, { "id": "PS50053", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50053" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ubiquitin-like", "eco_id": "ECO_0000259", "start_pos": 10, "end_pos": 88, "start_aa": "Ile", "end_aa": "Leu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 29, "end_pos": 31 }, { "start_pos": 70, "end_pos": 72 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B7D8-1", "uniprot_ac": "A0A287B7D8", "uniprot_id": "A0A287B7D8_PIG", "mass": { "chemical_mass": 15160.0, "monoisotopic_mass": 15160.0 }, "refseq": { "ac": "XP_003130638", "name": "uncharacterized protein C1orf53 homolog isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130638" }, "gene_names": [ { "name": "C10H1orf53", "type": "recommended", "evidence": [ { "id": "A0A287B7D8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B7D8" } ] }, { "name": "C10H1orf53", "type": "synonym", "evidence": [ { "id": "XP_003130638", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130638" } ] }, { "name": "C1orf53", "type": "synonym", "evidence": [ { "id": "A0A287B7D8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B7D8" } ] } ], "protein_names": [ { "name": "Chromosome 10 C1orf53 homolog", "type": "synonym", "evidence": [ { "id": "A0A287B7D8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B7D8/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein C1orf53 homolog isoform X2", "type": "synonym", "evidence": [ { "id": "XP_003130638", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130638" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B7D8", "url": "https://www.uniprot.org/uniprotkb/A0A287B7D8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "C10H1orf53", "url": "https://www.uniprot.org/uniprotkb/A0A287B7D8", "locus": {} } ], "crossref": [ { "id": "A0A287B7D8", "url": "https://alphafold.ebi.ac.uk/entry/A0A287B7D8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000032380", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000032380", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100521391", "url": "https://www.ncbi.nlm.nih.gov/gene/100521391", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR040807", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040807", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100521391", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521391", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CSVARED", "url": "https://omabrowser.org/oma/group/CSVARED/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287B7D8", "url": "https://www.orthodb.org/?gene=A0A287B7D8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21037", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21037", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21037:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21037:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF17653", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17653", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003130638", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130638", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B7D8", "url": "https://www.uniprot.org/uniprotkb/A0A287B7D8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B7D8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7D8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAWRVRVSAGAALRGQQPAAPPPKPPRVGAEFRQPLRFTFCSASKGDRGVSGPDSLEGGATGRASEELTEAERRIAELHAAACAAGQLNYVDPATGYVVLTQLAHVQRGHCCGSACRHCPYGQVSVKDPSKKKQFNSYFYV", "length": 142, "header": "tr|A0A287B7D8-1|A0A287B7D8_PIG Isoform 1 of Chromosome 10 C1orf53 homolog OS=Sus scrofa OX=9823 GN=C10H1orf53 PE=4 SV=1 CANONICAL=A0A287B7D8-1" }, "isoforms": [ { "isoform_ac": "A0A287B7D8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7D8/entry", "sequence": { "sequence": "MAAWRVRVSAGAALRGQQPAAPPPKPPRVGAEFRQPLRFTFCSASKGDRGVSGPDSLEGGATGRASEELTEAERRIAELHAAACAAGQLNYVDPATGYVVLTQLAHVQRGHCCGSACRHCPYGQVSVKDPSKKKQFNSYFYV", "length": 142, "header": "tr|A0A287B7D8-1|A0A287B7D8_PIG Isoform 1 of Chromosome 10 C1orf53 homolog OS=Sus scrofa OX=9823 GN=C10H1orf53 PE=4 SV=1 CANONICAL=A0A287B7D8-1" }, "locus": { "chromosome": "10", "start_pos": 20737885, "end_pos": 20732787, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058577.3", "url": "https://www.ensembl.org/id/ENSSSCT00000058577.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052430.1", "url": "https://www.ensembl.org/id/ENSSSCP00000052430.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B7D8", "url": "https://www.uniprot.org/uniprotkb/A0A287B7D8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100521391", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521391", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0A6YWI4-1", "protein_name": "RIKEN cDNA 2310009B15 gene", "gene_name": "2310009B15Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAQGIWTLARVSLGRPPPRAEGFRQQLNSTLGSTSEGARGGSAADSWGTPEGEPRHPASRELTAAERHIVELHRAACAVRPAPACPARGLCACARPATRPRGGPAGRCWTSGLGRVGLGRPLRGSCEKPGRTFAFRTERCLP", "length": 143 }, "evidence": [ { "id": "A0A287B7D8", "url": "https://omabrowser.org/oma/group/A0A287B7D8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A8V0XZW1-1", "protein_name": "Chromosome 1 open reading frame 53", "gene_name": "C1orf53", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLCPTSSSARPSQLPHDGHSRDSSPAPARLPPALPGPGSARRPPQRARPGPRAATGAARSAAAAAARPPPPGQPPAPQLTPLERRIVELHREAAAAGRQTYVDPATGYQVLTEVAHLRRGKCCGSACRHCPYEQVNVKDQSKKKRFNSFFYV", "length": 152 }, "evidence": [ { "id": "A0A287B7D8", "url": "https://omabrowser.org/oma/group/A0A287B7D8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F7EXE9-1", "protein_name": "Similar to human chromosome 1 open reading frame 53", "gene_name": "C13h1orf53", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAQGIRALSRQALGRSPPWAEDFRQQLCSTLHSASEGACGGSAPGSWGTAEEEQRHPVNRELTPAERHIAELHRAACAVRPAPACPAASAPARVRPPDPEAGPGPEVLGAAGPLAWAGRPGASAQKVLRETRSHFCVPDREAGQLSYLDPATGYVVLTRLAHLQRGACCGSACRHCPYGQVNVKDPSKKKQFNSYFYV", "length": 199 }, "evidence": [ { "id": "A0A287B7D8", "url": "https://omabrowser.org/oma/group/A0A287B7D8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5VUE5-1", "protein_name": "Uncharacterized protein C1orf53", "gene_name": "C1orf53", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAARQIWARTGAALCRQPSAAPPPAPLWVRAGFRQQLSLTLCPANEGNCGGSAPSTPGRPERAARPSVSEELTAAERQIAELHAAACAAGQLNYVDPATGYVVLTQIAHLQRGECCGSACRHCPYGQVNVKDPSKKKQFNSYFYV", "length": 145 }, "evidence": [ { "id": "A0A287B7D8", "url": "https://omabrowser.org/oma/group/A0A287B7D8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": 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"https://www.uniprot.org/uniprotkb/A0A287B7D9", "locus": { "chromosome": "12", "start_pos": 46205060, "end_pos": 46085521, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000017794", "url": "https://www.ensembl.org/id/ENSSSCG00000017794" } ] } } ], "crossref": [ { "id": "ENSSSCG00000017794", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000017794", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd22968", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22968", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR002048", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002048", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011992", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011992", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018247", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018247", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029016", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029016", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR060479", "url": "https://www.ebi.ac.uk/interpro/entry/IPR060479", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR46788", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46788", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46788:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46788:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF28481", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF28481", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287B7D9", "url": "https://www.uniprot.org/uniprotkb/A0A287B7D9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B7D9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7D9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNESASQEEPKPTEENGKEDKERKQEETETKDPIKSSKSTLDISASGTCSNVAEAAANKTKSQELNLEGQPKMSTRSIKDSKPGVSKNTVFRKPAKVIFNLDQTTQDSKLEQPWKKNLFERVQARAQAMQQKIIDKENLKKELEKKTEEKLPKDNLAKEWFNTETMTLNTRAYLLDKLLPTLVPGMEKMLMQVEKKKLLTEADIPTKFDPINHLGEYLMRNNPNYIKDVEISGYQRVMRDVTEDLKMYVPNTIYNRVSKMKENIKQKREQRESINEVKVKVANTRKHALLEQFNEWILDPKGMIPMIVLISSYITDFKSEMFEGLLKHLCHCADEFRAVIKADMRRQMFAELFLYCDHGKVGFLDRQRTLALLETFYDQSSKVLRGVLRNPRQWPFVEFGEQDLPEFWGDMDNQKHIYEDFDKVLLKMNTLLSEKKSTRPQSPPEQQRGTTEEQEPNRISTKELEQDRESTGEQELYEESVAERGGYTGEPITNQGVPQGIHTESTAEQALYRESIIAQGEHEESTTGQGSYRGSPKKQGPHRQSSAEQGPHRQSSAEQGPHRGSTAEEGSHGESVLEPRRGSVLEEGARRESVVEQGPRRGSILEEAPRRESVVEQGPHGGSTAEQPPPTETIPEKQQDEDLTSQSRKGSILRESKKSREVISSEYSCRRGSDPALLWLWRRPVATAPIQPLAWEPPYTAGAAQEIFLCSICKAFLSFINFRIYSKIYNVQFIGHILLYLLETAKKEVQKDKSCERKSQKIEGKSWSGELLTCNWNTKYARCEDEEQANSIYGNSRFTDLHSIIRNIQSYTELKGRSAFNGVSFNLLQFVQLLETFVGEDSPLSVSEALTSFFKRSFVETKEEKMSSLEEAKQNASQVRRRLLLKALFQKWDSDGSGFLDLKEIDELLYTYKEGMEKESMKKAKLHIQFPKPHPDHEVRLSSKQFQKYIELVVSELRGNEDHILENVVEFLMSALERSHVESLRNCARQKWLHQIQRAAETSGVSLDPVYTETFKALTQDSKAHGNKKISAHISLLEENLLLPDRGNVLLRNVACTLDDAPFVLNRVLYRDMKGISFTVVDEGKPIHVPQVQHHGNIYFWNYSRKKNDQNGSFLALPLQDASMRIFGVLAVDTLRDPQKINIFLPHEIRFYQGVANVFSAAYHYVRSREHILHIVITGIGWLYNIITSSITAITTYFIEPGLEQVDYVLRNMMVTGHLGLTEIHKNPPTIFRKTCIFRDFLYKCTDSSEVVLASVCGENHIAVPLRERTGEALGVLDVNIGRSKMLFYREFKDLQKMIKVIQVACNEILGELSGEIKKNYILEIENVGEVQRAGILFFRVMLQELQGCLRLLTSVDFVSLLLYDYNPLAEPKSPPDSKSQELEANIKLVQDILKAIILFFHPELELSSDLRNWDKCKLYINRYLVENICDFDPTARNLKVNLKLIDDYIGGHSRTEVWEFGNIAIEYLYHWAYICLALMKLNKKINSAISPPLPSKTDSYMYAKMPGESLLGKC", "length": 1515, "header": "tr|A0A287B7D9-1|A0A287B7D9_PIG Isoform 1 of EF-hand calcium binding domain 5 OS=Sus scrofa OX=9823 GN=EFCAB5 PE=4 SV=3 CANONICAL=A0A287B7D9-1" }, "isoforms": [ { "isoform_ac": "A0A287B7D9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7D9/entry", "sequence": { "sequence": 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"MRLFHLCYPGTLHLVELVQPSCTLTGCVSLGEVFAICGSCDALGNWNPQNAVALLPENETGESMLWKATIVLSRGVSVQYRYFKGCFLEPKTIGGPCQVIVHKWETHLQPRSITPLENEIIIDDGQFGIHNGVETLDSGWLTCQTEIRLRLHYSEKPPVSITKKKFKKSRFRVKLTLEGLEEDDDDRVSPTVLHKMSNSLEISLISDNEFKCRHSQPECGYGLQPDRWTEYSIQTMEPDNLELIFDFFEEDLSEHVVQGDALPGHVGTACLLSSTIAESGKSAGILTLPIMSRNSRKTIGKVRVDYIIIKPLPGYGCDMKSSFSKYWKPRTPLDVGHRGAGNSTTTAQLAKVQENTIASLRNAASHGAAFVEFDVHLSKDFVPVVYHDLTCCLTMKKKFDADPVELFEIPVKELTFDQLQLLKLTHVTALKSKDLKESVVEEENSLSENQPFPSLKMVLESLPEDVGFNIEIKWICQQRDGMWDGNLSTYFDMNMFLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSDIYPELMDLRSRTTPIAMSFAQFENLLGINAHTEDLLRNPSYIQEAKAKGLVIFCWGDDTNDPENRKKLKELGVNGLIYDRIYDWMPEQPNIFQVEQLERLKQELPELKSCLCPTVSRFVPSSLCGEPDIHVDANSIDNVDSA", "length": 686, "header": "tr|A0A287B7N9-1|A0A287B7N9_PIG Isoform 1 of Glycerophosphocholine phosphodiesterase GPCPD1 OS=Sus scrofa OX=9823 GN=GPCPD1 PE=3 SV=2 CANONICAL=A0A287B7N9-1" }, "isoforms": [ { "isoform_ac": "A0A287B7N9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7N9/entry", "sequence": { "sequence": "MRLFHLCYPGTLHLVELVQPSCTLTGCVSLGEVFAICGSCDALGNWNPQNAVALLPENETGESMLWKATIVLSRGVSVQYRYFKGCFLEPKTIGGPCQVIVHKWETHLQPRSITPLENEIIIDDGQFGIHNGVETLDSGWLTCQTEIRLRLHYSEKPPVSITKKKFKKSRFRVKLTLEGLEEDDDDRVSPTVLHKMSNSLEISLISDNEFKCRHSQPECGYGLQPDRWTEYSIQTMEPDNLELIFDFFEEDLSEHVVQGDALPGHVGTACLLSSTIAESGKSAGILTLPIMSRNSRKTIGKVRVDYIIIKPLPGYGCDMKSSFSKYWKPRTPLDVGHRGAGNSTTTAQLAKVQENTIASLRNAASHGAAFVEFDVHLSKDFVPVVYHDLTCCLTMKKKFDADPVELFEIPVKELTFDQLQLLKLTHVTALKSKDLKESVVEEENSLSENQPFPSLKMVLESLPEDVGFNIEIKWICQQRDGMWDGNLSTYFDMNMFLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSDIYPELMDLRSRTTPIAMSFAQFENLLGINAHTEDLLRNPSYIQEAKAKGLVIFCWGDDTNDPENRKKLKELGVNGLIYDRIYDWMPEQPNIFQVEQLERLKQELPELKSCLCPTVSRFVPSSLCGEPDIHVDANSIDNVDSA", "length": 686, "header": "tr|A0A287B7N9-1|A0A287B7N9_PIG Isoform 1 of Glycerophosphocholine phosphodiesterase GPCPD1 OS=Sus scrofa OX=9823 GN=GPCPD1 PE=3 SV=2 CANONICAL=A0A287B7N9-1" }, "locus": { "chromosome": "17", "start_pos": 14466941, "end_pos": 14423865, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037806.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037806.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052123.2", "url": "https://www.ensembl.org/id/ENSSSCP00000052123.2" } ] } }, { "isoform_ac": "A0A8W4FC06-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FC06/entry", "sequence": { "sequence": "MTPSQVTFEIRGTLLPGEVFAICGSCDALGNWNPQNAVALLPENETGESMLWKATIVLSRGVSVQYRYFKGCFLEPKTIGGPCQVIVHKWETHLQPRSITPLGMGINCICLSILLD", "length": 116, "header": "tr|A0A8W4FC06-1|A0A287B7N9_PIG Computationally mapped isoform of Glycerophosphocholine phosphodiesterase GPCPD1 OS=Sus scrofa OX=9823 GN=GPCPD1 PE=3 SV=1 CANONICAL=A0A287B7N9-1" }, "locus": { "chromosome": "17", "start_pos": 14470211, "end_pos": 14457027, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000101685.1", "url": "https://www.ensembl.org/id/ENSSSCT00000101685.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076388.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076388.1" } ] } }, { "isoform_ac": "A0A8W4FK95-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FK95/entry", "sequence": { "sequence": "MRLFHLCYPGTLHLVELVQPSCTLTGCVSLGEVFAICGSCDALGNWNPQNAVALLPENETGESMLWKATIVLSRGVSVQYRYFKGCFLEPKTIGGPCQVIVHKWETHLQPRSITPLENEIIIDDGQFGIHNGVETLDSGWLTCQTEIRLRLHYSEKPPVSITKKKFKKSRFRVKLTLEGLEEDDDDRVSPTVLHKMSNSLEISLISDNEFKCRHSQPECGYGLQPDRWTEYSIQTMEPDNLELIFDFFEEDLSEHVVQGDALPGHVGTACLLSSTIAESGKSAGILTLPIMSRNSRKTIGKVRVDYIIIKPLPGYGCDMKSSFSKYWKPRTPLDVGHRGAGNSTTTAQLAKVQENTIASLRNAASHGAAFVEFDVHLSKDFVPVVYHDLTCCLTMKKKFDADPVELFEIPVKELTFDQLQLLKVVIIVLESLPEDVGFNIEIKWICQQRDGMWDGNLSTYFDMNMFLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSDIYPELMDLRSRTTPIAMSFAQFENLLGINAHTEDLLRNPSYIQEAKAKGLVIFCWGDDTNDPENRKKLKELGVNGLIYDRIYDWMPEQPNIFQVEQLERLKQELPELKSCLCPTVSRFVPSSLCGEPDIHVDANSIDNVDSA", "length": 656, "header": "tr|A0A8W4FK95-1|A0A287B7N9_PIG Computationally mapped isoform of Glycerophosphocholine phosphodiesterase GPCPD1 OS=Sus scrofa OX=9823 GN=GPCPD1 PE=3 SV=1 CANONICAL=A0A287B7N9-1" }, "locus": { "chromosome": "17", "start_pos": 14466941, "end_pos": 14423865, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000101021.1", "url": "https://www.ensembl.org/id/ENSSSCT00000101021.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079647.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079647.1" } ] } }, { "isoform_ac": "A0A8W4FL36-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FL36/entry", "sequence": { "sequence": "MRLFHLCYPGTLHLVELVQPSCTLTGCVSLGEVFAICGSCDALGNWNPQNAVALLPENETGESMLWKATIVLSRGVSVQYRYFKGCFLEPKTIGGPCQVIVHKWETHLQPRSITPLENEIIIDDGQFGIHNGVETLDSGWLTCQTEIRLRLHYSEKPPVSITKKKFKKSRFRVKLTLEGLEEDDDDRVSPTVLHKMSNSLEISLISDNEFKCRHSQPECGYGLQPDRWTEYSIQTMEPDNLELIFDFFEEDLSEHVVQGDALPGHVGTACLLSSTIAESGKSAGILTLPIMSRNSRKTIGKVRVDYIIIKPLPGYGCDMKSSFSKYWKPRTPLDVGHRGAGNSTTTAQLAKVQENTIASLRNAASHGAAFVEFDVHLSKDFVPVVYHDLTCCLTMKKKFDADPVELFEIPVKELTFDQLQLLKLTHVTALKSKDLKESVVEEENSLSENQPFPSLKMVLESLPEDVGFNIEIKWICQQRDGMWDGNLSTYFDMNMFLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSDIYPELMDLRSRTTPIAMSFAQFENLLGINAHTEDLLRNPSYIQEAKAKGLVIFCWGDDTNDPENRKKLKELGVNGLIYDRYLFFMKNFPGLFEKKWNLRVYHSHFKSLLKFHVTGRQPQCTDSA", "length": 668, "header": "tr|A0A8W4FL36-1|A0A287B7N9_PIG Computationally mapped isoform of Glycerophosphocholine phosphodiesterase GPCPD1 OS=Sus scrofa OX=9823 GN=GPCPD1 PE=3 SV=1 CANONICAL=A0A287B7N9-1" }, "locus": { "chromosome": "17", "start_pos": 14466941, "end_pos": 14430698, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093150.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093150.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079012.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079012.1" } ] } }, { "isoform_ac": "A0A8W4FNR5-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FNR5/entry", "sequence": { "sequence": "MLWKATIVLSRGVSVQYRYFKGCFLEPKTIGGPCQVIVHKWETHLQPRSITPLENEIIIDDGQFGIHNGVETLDSGWLTCQTEIRLRLHYSEKPPVSITKKKFKKSRFRVKLTLEGLEEDDDDRVSPTVLHKMSNSLEISLISDNEFKCRHSQPECGYGLQPDRWTEYSIQTMEPDNLELIFDFFEEDLSEHVVQGDALPGHVGTACLLSSTIAESGKSAGILTLPIMSRNSRKTIGKVRVDYIIIKPLPGYGCDMKSSFSKYWKPRTPLDVGHRGAGNSTTTAQLAKVQENTIASLRNAASHGAAFVEFDVHLSKDFVPVVYHDLTCCLTMKKKFDADPVELFEIPVKELTFDQLQLLKVVIIVLESLPEDVGFNIEIKWICQQRDGMWDGNLSTYFDMNMFLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSDIYPELMDLRSRTTPIAMSFAQFENLLGINAHTEDLLRNPSYIQEAKAKGLVIFCWGDDTNDPENRKKLKELGVNGLIYDRYLFFMKNFPGLFEKKVKL", "length": 549, "header": "tr|A0A8W4FNR5-1|A0A287B7N9_PIG Computationally mapped isoform of Glycerophosphocholine phosphodiesterase GPCPD1 OS=Sus scrofa OX=9823 GN=GPCPD1 PE=3 SV=1 CANONICAL=A0A287B7N9-1" }, "locus": { "chromosome": "17", "start_pos": 14463620, "end_pos": 14430824, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000099908.1", "url": "https://www.ensembl.org/id/ENSSSCT00000099908.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000081005.1", "url": "https://www.ensembl.org/id/ENSSSCP00000081005.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FC06", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FC06" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A287B7N9", "url": "https://www.uniprot.org/uniprotkb/A0A287B7N9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "glycerophospholipid catabolic process", "id": "GO:0046475", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046475", "evidence": [ { "database": "UniProtKB", "id": "A0A287B7N9", "url": "https://www.uniprot.org/uniprotkb/A0A287B7N9" } ], "pmid": "" }, { "name": "lipid metabolic process", "id": "GO:0006629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006629", "evidence": [ { "database": "UniProtKB", "id": "A0A287B7N9", "url": "https://www.uniprot.org/uniprotkb/A0A287B7N9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "starch binding", "id": "GO:2001070", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2001070", "evidence": [ { "database": "UniProtKB", "id": "A0A287B7N9", "url": "https://www.uniprot.org/uniprotkb/A0A287B7N9" } ], "pmid": "" }, { "name": "glycerophosphocholine phosphodiesterase activity", "id": "GO:0047389", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0047389", "evidence": [ { "database": "UniProtKB", "id": "A0A287B7N9", "url": "https://www.uniprot.org/uniprotkb/A0A287B7N9" } ], "pmid": "" }, { "name": "phosphoric diester hydrolase activity", "id": "GO:0008081", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008081", "evidence": [ { "database": "UniProtKB", "id": "A0A287B7N9", "url": "https://www.uniprot.org/uniprotkb/A0A287B7N9" } ], "pmid": "" }, { "name": "carbohydrate binding", "id": "GO:0030246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030246", "evidence": [ { "database": "UniProtKB", "id": "A0A287B7N9", "url": "https://www.uniprot.org/uniprotkb/A0A287B7N9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 342, "end_pos": 344, "annotation": "n_glycosylation_sequon" }, { "start_pos": 486, "end_pos": 488, "annotation": "n_glycosylation_sequon" }, { "start_pos": 58, "end_pos": 60, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "16061", "name": "", "equation": "sn-glycerol 3-phosphocholine + H2O = sn-glycerol 3-phosphate + choline + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "16061", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/16061" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287B7N9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 686, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287B7N9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287B7N9" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287B7N9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B7N9" }, { "id": "PS51166", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51166" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CBM20", "eco_id": "ECO_0000259", "start_pos": 6, "end_pos": 129, "start_aa": "Leu", "end_aa": "Ile", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A287B7N9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B7N9" }, { "id": "PS51704", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51704" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "GP-PDE", "eco_id": "ECO_0000259", "start_pos": 332, "end_pos": 632, "start_aa": "Pro", "end_aa": "Gln", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 342, "end_pos": 344 }, { "start_pos": 486, "end_pos": 488 }, { "start_pos": 58, "end_pos": 60 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B7Q4-1", "uniprot_ac": "A0A287B7Q4", "uniprot_id": "A0A287B7Q4_PIG", "mass": { "chemical_mass": 63661.0, "monoisotopic_mass": 63661.0 }, "refseq": { "ac": "XP_020952250", "name": "protein FAM151A", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020952250" }, "gene_names": [ { "name": "FAM151A", "type": "recommended", "evidence": [ { "id": "A0A287B7Q4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Q4" } ] }, { "name": "FAM151A", "type": "synonym", "evidence": [ { "id": "XP_020952250", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020952250" } ] } ], "protein_names": [ { "name": "Protein FAM151A", "type": "recommended", "evidence": [ { "id": "A0A287B7Q4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Q4/entry#names_and_taxonomy" } ] }, { "name": "protein FAM151A", "type": "synonym", "evidence": [ { "id": "XP_020952250", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020952250" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B7Q4", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Q4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "FAM151A", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Q4", "locus": { "chromosome": "6", "start_pos": 157753796, "end_pos": 157741281, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000036649", "url": "https://www.ensembl.org/id/ENSSSCG00000036649" } ] } } ], "crossref": [ { "id": "A0A287B7Q4", "url": "https://alphafold.ebi.ac.uk/entry/A0A287B7Q4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000036649", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000036649", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100513740", "url": "https://www.ncbi.nlm.nih.gov/gene/100513740", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR019356", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019356", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100513740", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513740", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "AHQVYYD", "url": "https://omabrowser.org/oma/group/AHQVYYD/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287B7Q4", "url": "https://www.orthodb.org/?gene=A0A287B7Q4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21184", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21184", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21184:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21184:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF10223", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10223", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020952250", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020952250", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B7Q4", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Q4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B7Q4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Q4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MACKKGCSKWSLVTGACVALGFAVIMVLCFTLQKRTQPGCVQAAACRSDADMMDYLLSVGQLSQRDGLLVTWYHAANSQKEMQAALSSDIMVLEADVTVEGLNTANETGVPIMAHPPAIYSDNTLQQWLETVLASSQKGIKLDFKSIKAVGPALDLLRRLTEEGRVRRPVWINADILRGPNMPISIEVNATQFLNLVQEKYPETTLSPGWTTLYLPQLPNGTYSRAMVEKMQELVGPVPQRVTFPVRAVMVRAAWPHFSWLLGQSERYSLTLWQSASDPLLVDDLLYVRDNTAAHQIYYDIFEPLLSQFKQLAANTSRKQSYYTGGSLVPLLQLPGEEGVSVEWLVPEIQGNGSTATVHLPDREGMILLNVGLQEPAAGDPVAVVRAPDGRALTLEPCLRQLAMRPGSWGVHLHMAVPTALRPSLATLANLSALGHLLRPVWVGATISHGSFVAPGYVTGRELLAAVAEVFPHVTVAPGWPEEVLGSGYREQLVTDMLELCQGLWQPVSFQLQAGPLGQSTAGVVARLLAASPRATVTVEHGPGRGHYASVRAALLAARAVDKTRVYYRLPQSDRADLLANVGRN", "length": 585, "header": "tr|A0A287B7Q4-1|A0A287B7Q4_PIG Isoform 1 of Protein FAM151A OS=Sus scrofa OX=9823 GN=FAM151A PE=3 SV=1 CANONICAL=A0A287B7Q4-1" }, "isoforms": [ { "isoform_ac": "A0A287B7Q4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Q4/entry", "sequence": { "sequence": "MACKKGCSKWSLVTGACVALGFAVIMVLCFTLQKRTQPGCVQAAACRSDADMMDYLLSVGQLSQRDGLLVTWYHAANSQKEMQAALSSDIMVLEADVTVEGLNTANETGVPIMAHPPAIYSDNTLQQWLETVLASSQKGIKLDFKSIKAVGPALDLLRRLTEEGRVRRPVWINADILRGPNMPISIEVNATQFLNLVQEKYPETTLSPGWTTLYLPQLPNGTYSRAMVEKMQELVGPVPQRVTFPVRAVMVRAAWPHFSWLLGQSERYSLTLWQSASDPLLVDDLLYVRDNTAAHQIYYDIFEPLLSQFKQLAANTSRKQSYYTGGSLVPLLQLPGEEGVSVEWLVPEIQGNGSTATVHLPDREGMILLNVGLQEPAAGDPVAVVRAPDGRALTLEPCLRQLAMRPGSWGVHLHMAVPTALRPSLATLANLSALGHLLRPVWVGATISHGSFVAPGYVTGRELLAAVAEVFPHVTVAPGWPEEVLGSGYREQLVTDMLELCQGLWQPVSFQLQAGPLGQSTAGVVARLLAASPRATVTVEHGPGRGHYASVRAALLAARAVDKTRVYYRLPQSDRADLLANVGRN", "length": 585, "header": "tr|A0A287B7Q4-1|A0A287B7Q4_PIG Isoform 1 of Protein FAM151A OS=Sus scrofa OX=9823 GN=FAM151A PE=3 SV=1 CANONICAL=A0A287B7Q4-1" }, "locus": { "chromosome": "6", "start_pos": 157753710, "end_pos": 157741688, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063442.2", "url": "https://www.ensembl.org/id/ENSSSCT00000063442.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052348.1", "url": "https://www.ensembl.org/id/ENSSSCP00000052348.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B7Q4", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Q4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100513740", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513740", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1LZY6-1", "protein_name": "Protein FAM151A", "gene_name": "FAM151A", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MANKKGCWKWAIVGGVSAAVVFAIAMVLGFSLQKDTILPGCEQDGTCRSDADMLDYLLSLGQISQRDGLLVTWYHRANSKEQMKAALSSNVMALEADITIEGLGTVNETGVPIMAHPPAIYSDNTLEQWLEAVLASSQKGIKLDFKSIKAVGPSLDLLRRLTEEGKVRRPVWINADIQRGPNVGLSIEVNATQFLALVQEKYPEATLSPGWTTFYLPLFPNVTYTRAMVEQMQELVGALPQRVTFPVLAVMARAAWPHFSWLLAQSDRYTLTMWQSASDPVSVDDLLYIRDNTATHQVYYDIFEPFLSQFKQLAMNTSRKPSYYTGGSLIPALQHPGDEGLSVEWLVPDIQGNGSAATVQLPDREGMILLDVGLQKPAAGDPVPIVRTPDGRALTLESCLQQLATHPGRWGIHVHIAEPTALRPSLATLATLSALGHLSRPVWVGATVSHGSFMVPGYVTGRELLTAVAEVFPHVTVAPGWPEEVLGSGYREQLLTDMLELCQGLWQPVSFQLQAGPLAQSPTGVVARLLKASPRATVTVEHSPGRGLYASVRAALLAARAVKKTRVYYRLPQSYRQDLLADVGTH", "length": 586 }, "evidence": [ { "id": "A0A287B7Q4", "url": "https://omabrowser.org/oma/group/A0A287B7Q4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A9J7FIC5-1", "protein_name": "Protein FAM151A", "gene_name": "Fam151a", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSCKKWCSNSQDKWILVGSVSVTLVLTIAMVLGLTLNRGTQPGCEQDAVCRSDADMLDYMLSTGQINHRDGLLVTWYHAANSKKEMEAALNSDVMVLEADVTVEGFTTANETGVPIMAHPPAIYSDNTLQQWLEAVLASSQKGIKLDFKSLKAVGPSLDLLRHLTEAGRIRRPVWINADIMRGPNVPISVEINATQFLALVQEKYPEVTISPGFTTLYVPQLPNSTYTQAMVEKMQELVGALPQRITFPVRASMARAAWPHFSWLLGQSERYSLTLWQGASDPVSVDDLLFIRDNSATHQIYYDLFEPVLSQFKQLALNSTRKRTYYTGGSLIPLLQQPRGDGLEVEWLVPEVNGSGRTAAITVPDREGMILLDVGLQQPEAGNPVPILRAPGGPVMTLESFLLQLAVHPRRWGIHVNIVEPAALRPSLATLAHLSTLGHLPWPVWVGATISHGNFVVPGHVAGRELLTAVAEVFPHVTVAPGWPEEVLGSGYQEQMVTDMLELCQGLWQPVSFQLQAGPLGRSTAKAVARLLAASPRATVTVHHSVAGNSYADAWAGLWVARAMDRTRVYYRIPQEYREDLLADVSRN", "length": 589 }, "evidence": [ { "id": "A0A287B7Q4", "url": "https://omabrowser.org/oma/group/A0A287B7Q4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A5PN38-1", "protein_name": "Protein FAM151A", "gene_name": "fam151a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEVKEEKSCSIGEGEEAEGKEAKTVLGIFTREQFIMLCVGLGLIALLLIITLTSVFVIAKSDASVDVDMEPFPSDGDMLDFLLQTGEIEEKDGLYATWYHAANSKSEMSKALNSDVMILEADVNVQGHNTVNETNIPIMAHPPDIYSDNTLEEWLDAVLKSKKGVKLDFKSISAVEPSLDLLRAKNQTGINRPVWINADILPGPNVPEFWPVVNASEFFELIQLKFPDVTISPGWKVLYLSIFPNVTYTRSMVEQMYSTIRHLPQKITFPVHALMAKNGWPHLSWLLSQSSRYSLTLWQGKENPTLNDLLFIRDNSNPQRIYYDIYEPVLSQFREAAKIKDRPRRFYPGGDIVDYFRPADSDGLNIQWDTVNDKDSLLSLLEDSPGGMLVIPVKSSDGHPNIPIIDGSEMPLKDCLDLILASTKPWGIYLQIKSQNQLSLSLELLRQAYDIDLLHHPTWVNMDISHGAVHIQGYMTGEEFLRTVDRIFPHVTLAPSWPKEALVEGYTPEMLEPMVQLFHRAWQDVSLQLQAEALDRSETWRLVLVQPRFSLTVEHQTENKDINAGIESLMAIRAANRQRSFYNIPKMYREHITDLSVRK", "length": 599 }, "evidence": [ { "id": "A0A287B7Q4", "url": "https://omabrowser.org/oma/group/A0A287B7Q4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q642A7-1", "protein_name": "Protein FAM151A", "gene_name": "Fam151a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSCKKCCSSSQTKWILAGSVSMTLVLAISMILGLTLYQRTRPGCENDAVCRPDADMLDYLQNIGQISHRDGLLVTWYHAANSKKEMEAALNSDVMVLEADVTVEGFNTANETEVPIMAHPPAIYSDNTLKEWLEAVLASSQKGIKLDFKSLKAVGPSLDLLRQLTEAGRIRRPVWINADILKGPNVPISTEVNATQFLALVQEKYPKATISPGFTTLYVHQLPNSTYTQAMVETMEELVRALPQKVTFPMRAVMTRAAWPHFSWLLSQSERYSLTLWQGASDPVSVEDLLFIRDNSAPHQIYYDLFEPVLSQFKQLALNTTRKRTFYTGGSLIPVLQQPKGDGLEVEWLALEVNDKGRKAAITVPDREGMILLDVGLQEPEVGNPVPVLRTPGGSVLTLESCLLHLAVHATRWSIHVNITEPAALRPSLATLAHLSTLGHLPWPVWVGATVSYGSFVVPGHIAGRELLTAVAEVFPHVTVAPAWPEEMLGSGYQEQMVTEMLELCQGLRQPVSFQLQAGPLGQSPANTVARLLAFSPRATVTVYHSSAGNSYADVWAGLWAARAVDRTRVYYRIPQEYRKDLLAHVDRHRPSSRTGPSYVEGFPGESR", "length": 608 }, "evidence": [ { "id": "A0A287B7Q4", "url": "https://omabrowser.org/oma/group/A0A287B7Q4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8QZW3-1", "protein_name": "Protein FAM151A", "gene_name": "Fam151a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSCKKWCSSSQAKWILAGSVTVTLVLAISLILGLTLHQGTQPGCENDAICGPDADMLDYLMGMGQISHRDGLLVTWYHAANSKKEMAAALNSDVMVLEADVTVEGFNTANETKVPIMAHPPAIYSDNTLQEWLEAVLASSQKGIKLDFKSLKAVGPSLDLLRQLTEAGRIRRPVWINADILRGPNVPISIEINATQFLTLVQEKYPKATISPGFTTLYVPQLPNSTYTQAMVETMQELVGALPQKVTFPVRAVMTRAAWPHFSWLLSQSERYSLTLWQGASDPVSVEDLLFIRDNSAAHQIYYDLFEPVLSQFKQLALNTTRKRTYYTGGSLIPLLQQPKGDGLEVEWLVLEVNGSGRRAAITVPDREGMILLDIGLQEPEAGNPVPILHTPGGPALTLESCLLRLAVHPRRWGIHVNIVEPEALRPSLATLAHLSTLGHLPWPVWVGSTVSHGSFVVPGHIAGRELLTAVAEVFPHVTVAPGWPEEMLDSGYQEQMVTDMLELCQGLRQPVSFQLQAGPLSQSPANTVARLLASSPRATVTVYHSTAGNSHVDLWAGLWAARAVDRTRVYYRISQEYWKDLQADVSSNRPSSRIGPSSVEGFPGESR", "length": 608 }, "evidence": [ { "id": "A0A287B7Q4", "url": "https://omabrowser.org/oma/group/A0A287B7Q4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8WW52-1", "protein_name": "Protein FAM151A", "gene_name": "FAM151A", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVCREQLSKNQVKWVFAGITCVSVVVIAAIVLAITLRRPGCELEACSPDADMLDYLLSLGQISRRDALEVTWYHAANSKKAMTAALNSNITVLEADVNVEGLGTANETGVPIMAHPPTIYSDNTLEQWLDAVLGSSQKGIKLDFKNIKAVGPSLDLLRQLTEEGKVRRPIWINADILKGPNMLISTEVNATQFLALVQEKYPKATLSPGWTTFYMSTSPNRTYTQAMVEKMHELVGGVPQRVTFPVRSSMVRAAWPHFSWLLSQSERYSLTLWQAASDPMSVEDLLYVRDNTAVHQVYYDIFEPLLSQFKQLALNATRKPMYYTGGSLIPLLQLPGDDGLNVEWLVPDVQGSGKTATMTLPDTEGMILLNTGLEGTVAENPVPIVHTPSGNILTLESCLQQLATHPGHWGIHLQIAEPAALRPSLALLARLSSLGLLHWPVWVGAKISHGSFSVPGHVAGRELLTAVAEVFPHVTVAPGWPEEVLGSGYREQLLTDMLELCQGLWQPVSFQMQAMLLGHSTAGAIGRLLASSPRATVTVEHNPAGGDYASVRTALLAARAVDRTRVYYRLPQGYHKDLLAHVGRN", "length": 585 }, "evidence": [ { "id": "A0A287B7Q4", "url": "https://omabrowser.org/oma/group/A0A287B7Q4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "A0A287B7Q4", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Q4" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A287B7Q4", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Q4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 106, "end_pos": 108, "annotation": "n_glycosylation_sequon" }, { "start_pos": 189, "end_pos": 191, "annotation": "n_glycosylation_sequon" }, { "start_pos": 220, "end_pos": 222, "annotation": "n_glycosylation_sequon" }, { "start_pos": 315, "end_pos": 317, "annotation": "n_glycosylation_sequon" }, { "start_pos": 352, "end_pos": 354, "annotation": "n_glycosylation_sequon" }, { "start_pos": 430, "end_pos": 432, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287B7Q4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 585, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287B7Q4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287B7Q4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287B7Q4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Q4" }, { "id": "PF10223", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10223" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Menorin-like", "eco_id": "ECO_0000259", "start_pos": 66, "end_pos": 305, "start_aa": "Asp", "end_aa": "Leu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], 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], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9D2E9-1", "protein_name": "Transmembrane protein 190", "gene_name": "Tmem190", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVGSGISALGLLLLMQGSVDANGIQGFFYPWSCEGDVWDRESCGGQAAIENPNLCLRLRCCYRDGVCYHQRPDENMRRKHMWALGWTCGSLLFLITSICLFWWARRQDMLHLPRFLHRKCSKLSKTVSSLSKDRRSANKSTTVLQSPGGEVETAAAVSGEDTGGEE", "length": 166 }, "evidence": [ { "id": "A0A287B7U4", "url": "https://omabrowser.org/oma/group/A0A287B7U4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "A0A287B7U4", "url": "https://www.uniprot.org/uniprotkb/A0A287B7U4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "hematopoietic progenitor cell differentiation", "id": "GO:0002244", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002244", "evidence": [ { "database": "UniProtKB", "id": "A0A287B7U4", "url": "https://www.uniprot.org/uniprotkb/A0A287B7U4" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "inner acrosomal membrane", "id": "GO:0002079", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002079", "evidence": [ { "database": "UniProtKB", "id": "A0A287B7U4", "url": "https://www.uniprot.org/uniprotkb/A0A287B7U4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287B7U4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 181, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287B7U4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287B7U4" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287B7W3-1", "uniprot_ac": "A0A287B7W3", "uniprot_id": "A0A287B7W3_PIG", "mass": { "chemical_mass": 43147.0, "monoisotopic_mass": 43147.0 }, "refseq": { "ac": "XP_003482181", "name": "glucose-fructose oxidoreductase domain-containing protein 1 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003482181" }, "gene_names": [ { "name": "GFOD1", "type": "recommended", "evidence": [ { "id": "A0A287B7W3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B7W3" } ] }, { "name": "GFOD1", "type": "synonym", "evidence": [ { "id": "XP_003482181", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003482181" } ] } ], "protein_names": [ { "name": "Gfo/Idh/MocA-like oxidoreductase domain containing 1", "type": "synonym", "evidence": [ { "id": "A0A287B7W3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B7W3/entry#names_and_taxonomy" } ] }, { "name": "glucose-fructose oxidoreductase domain-containing protein 1 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_003482181", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003482181" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B7W3", "url": "https://www.uniprot.org/uniprotkb/A0A287B7W3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GFOD1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7W3", "locus": { "chromosome": "7", "start_pos": 9735660, "end_pos": 9853788, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000035867", "url": "https://www.ensembl.org/id/ENSSSCG00000035867" } ] } } ], "crossref": [ { "id": "ENSSSCG00000035867", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000035867", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100739137", "url": "https://www.ncbi.nlm.nih.gov/gene/100739137", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000683", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000683", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036291", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036291", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050463", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050463", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055170", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055170", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100739137", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100739137", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NQKDYVH", "url": "https://omabrowser.org/oma/group/NQKDYVH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287B7W3", "url": "https://www.orthodb.org/?gene=A0A287B7W3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR43818", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43818", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR43818:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43818:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01408", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01408", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22725", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22725", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-9013406", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013406", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003482181", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003482181", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B7W3", "url": "https://www.uniprot.org/uniprotkb/A0A287B7W3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B7W3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7W3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLPGVGVFGTSLTARVIIPLLKDEGFSVKALWGRTPEEAEELAKEMSVPFYTSRIDEVLLHQDVDLVCINLPPPLTRQIAVKTLGIGKNVICDRTATPLDAFRMMSAAHYYPKLMSIMGNVLRFLPAFVRMKQLIEEGYVGELLVCEVQVHSGSLLGKKYNWSCDDLMGGGGLHSVGTYIIDLLTFLTGQKAVKVHGLLKTFVKQTDHIKGIRQITSDDFCTFQMVLEGGVCCTVTLNFNVPGEFKQDVTVVGSAGRLLAVGTDLYGQRNSAAEQELLVQDATPVSNSLLPEKAFSDIPSPYLRGTIKMMQAVRQAFQDQDDRRTWDGRPLTMAATFDDCLYALCVVDTIKRSSQTGEWQNIAVMTEEPELSPAYLISEAMRRSRVSLYC", "length": 390, "header": "tr|A0A287B7W3-1|A0A287B7W3_PIG Isoform 1 of Gfo/Idh/MocA-like oxidoreductase domain containing 1 OS=Sus scrofa OX=9823 GN=GFOD1 PE=3 SV=1 CANONICAL=A0A287B7W3-1" }, "isoforms": [ { "isoform_ac": "A0A287B7W3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7W3/entry", "sequence": { "sequence": "MLPGVGVFGTSLTARVIIPLLKDEGFSVKALWGRTPEEAEELAKEMSVPFYTSRIDEVLLHQDVDLVCINLPPPLTRQIAVKTLGIGKNVICDRTATPLDAFRMMSAAHYYPKLMSIMGNVLRFLPAFVRMKQLIEEGYVGELLVCEVQVHSGSLLGKKYNWSCDDLMGGGGLHSVGTYIIDLLTFLTGQKAVKVHGLLKTFVKQTDHIKGIRQITSDDFCTFQMVLEGGVCCTVTLNFNVPGEFKQDVTVVGSAGRLLAVGTDLYGQRNSAAEQELLVQDATPVSNSLLPEKAFSDIPSPYLRGTIKMMQAVRQAFQDQDDRRTWDGRPLTMAATFDDCLYALCVVDTIKRSSQTGEWQNIAVMTEEPELSPAYLISEAMRRSRVSLYC", "length": 390, "header": "tr|A0A287B7W3-1|A0A287B7W3_PIG Isoform 1 of Gfo/Idh/MocA-like oxidoreductase domain containing 1 OS=Sus scrofa OX=9823 GN=GFOD1 PE=3 SV=1 CANONICAL=A0A287B7W3-1" }, "locus": { "chromosome": "7", "start_pos": 9853589, "end_pos": 9742390, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056468.3", "url": "https://www.ensembl.org/id/ENSSSCT00000056468.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052559.1", "url": "https://www.ensembl.org/id/ENSSSCP00000052559.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B7W3", "url": "https://www.uniprot.org/uniprotkb/A0A287B7W3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100739137", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100739137", "resource": "KEGG Pathway" }, { "id": "R-SSC-9013406", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013406", "resource": "Reactome", "description": "RHOQ GTPase cycle" } ], "orthologs": [ { "uniprot_canonical_ac": "E1BYY1-1", "protein_name": "Gfo/Idh/MocA-like oxidoreductase domain containing 1", "gene_name": "GFOD1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLPGVGVFGTGLTARVIVPLLQAEGFAVKALWGRTAEEAEELAKEMSVPFHTSRIDEVLLHQDVDLVCVNLPPPLTRQVAVKTLGIGKNVICDRTATPLDAFRMMTAAHYYPKLMSIMGNVLRFLPAFVKMKQLIQEGYVGELLVCEVQVHSGSLLGKKYNWSCDDLMGGGGLHSVGTYIIDLLTFLTSQKAVKVHGLLKTFVKQTDHIKGIRQITSDDFCTFQMVLEGGVCCTVTLNFNVPGEFKQDIIVVGSAGRLIVIGTDLYGQSNSSPQQELLLKDSTPVSNSLLPEKAFSDIPSPYLRGTIKMVQAVRQAFEDQDDRRTWDGRPLTMAATFDDCLYALCVVDTIKKSNQLGEWQNISIMTEEPELSPAYLISEAMRKSRMSLYC", "length": 390 }, "evidence": [ { "id": "A0A287B7W3", "url": "https://omabrowser.org/oma/group/A0A287B7W3/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E7FCE9-1", "protein_name": "Glucose-fructose oxidoreductase domain-containing protein 1", "gene_name": "gfod1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLPGVGVFGTSLTARVIIPLLKGEGFSVKALWGRTQEEAEELARDMNVPFYTNRIDDVLLHPDVDLVCINLPPPLTRQIAVKTLGIGKNVICDRTATPLDAFRMMSAAQYYPKLLSIMGNVLRFLPAFVRMKELLEEGYIGELMVCEAQVHSGSLLGKKYNWSCDDLMGGGGLHSVGSYIIDLLTFLTGRRAAKVHGFLKTFVKQTDHIRGIRQITSDDFCTFQMVLEGGACCTVTLNFNVPGEFRQEVVVVGTAGRLKVCGTDLYGQKNDGECGQELLLKDKTAIGNASLPDKAFRDIPSPYLTGTICMVQAVRQAFQDQDDRRTWDGRPLTMAATFEDCLYALCVVDTIKKSNQCGEWQNIEVMTEEPEVSPAYLISEAMRRSRMSLYC", "length": 391 }, "evidence": [ { "id": "A0A287B7W3", "url": "https://omabrowser.org/oma/group/A0A287B7W3/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "G3H0G2-1", "protein_name": "Glucose-fructose oxidoreductase domain-containing protein 1 isoform X1", "gene_name": "Gfod1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLPGVGVFGTSLTARVIIPLLKDEGFAVKALWGRTQEEAEELAKEMSVPFYTSRIDEVLLHQDVDLVCINLPPPLTRQIAVKTLGIGKNVICDRTATPLDAFRMMSAAHYYPKLMSIMGNVLRFLPAFVRMKQLIEEGYVGELLVCEVQVHSGSLLGKKYNWSCDDLMGGGGLHSVGTYIIDLLTFLTGQKAVKVHGLLKTFVKQTDHIKGIRQITSDDFCTFQMVLEGGVCCTVTLNFNVPGEFKQDVTVVGSAGRLLAVGTDLYGQRNSAPEQELLLQDTTSVSNSLLPEKAFSDIPSPYLRGTMKMMQAVRQAFQDQDDRRTWDGRPLTMAATFDDCLYALCVVDTIKRSSQTGEWQNIAIMTEEPELSPAYLISEAMRRSRMSLYC", "length": 390 }, "evidence": [ { "id": "A0A287B7W3", "url": "https://omabrowser.org/oma/group/A0A287B7W3/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q3UHD2-1", "protein_name": "Glucose-fructose oxidoreductase domain-containing protein 1", "gene_name": "Gfod1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPGVGVFGTSLTARVIIPLLKDEGFAVKALWGRTQEEAEELAKEMSVPFYTSRIDEVLLHQDVDLVCINLPPPLTRQIAVKTLGIGKNVICDRTATPLDAFRMMSAAHYYPKLMSIMGNVLRFLPAFVRMKQLIEEGYVGELLVCEVQVHSGSLLGKKYNWSCDDLMGGGGLHSVGTYIIDLLTFLTGQKAVKVHGLLKTFVKQTDHIKGIRQITSDDFCTFQMVLEGGVCCTVTLNFNVPGEFKQDVTVVGSAGRLLAVGTDLYGQRNSAPEQELLLQDTTSVSNSLLPEKAFSDIPSPYLRGTMKMMQAVRQAFQDQDDRRTWDGRPLTMAATFDDCLYALCVVDTIKRSSQTGEWQNIAIMTEEPELSPAYLISEAMRRSRMSLYC", "length": 390 }, "evidence": [ { "id": "A0A287B7W3", "url": "https://omabrowser.org/oma/group/A0A287B7W3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NXC2-1", "protein_name": "Glucose-fructose oxidoreductase domain-containing protein 1", "gene_name": "GFOD1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"monoisotopic_mass": 123677.0 }, "refseq": { "ac": "XP_020928079", "name": "transmembrane protein 132C", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020928079" }, "gene_names": [ { "name": "TMEM132C", "type": "recommended", "evidence": [ { "id": "A0A287B7Y2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Y2" } ] }, { "name": "TMEM132C", "type": "synonym", "evidence": [ { "id": "XP_020928079", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020928079" } ] } ], "protein_names": [ { "name": "Transmembrane protein 132C", "type": "synonym", "evidence": [ { "id": "A0A287B7Y2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Y2/entry#names_and_taxonomy" } ] }, { "name": "transmembrane protein 132C", "type": "synonym", "evidence": [ { "id": "XP_020928079", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020928079" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B7Y2", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Y2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TMEM132C", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Y2", "locus": { "chromosome": "14", "start_pos": 26209565, "end_pos": 26611610, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000009753", "url": "https://www.ensembl.org/id/ENSSSCG00000009753" } ] } } ], "crossref": [ { "id": "A0A287B7Y2", "url": "https://alphafold.ebi.ac.uk/entry/A0A287B7Y2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000009753", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000009753", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100623362", "url": "https://www.ncbi.nlm.nih.gov/gene/100623362", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR026307", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026307", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR031435", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031435", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR031436", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031436", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR031437", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031437", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055421", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055421", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055422", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055422", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055423", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055423", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055424", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055424", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100623362", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623362", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VYEVFSW", "url": "https://omabrowser.org/oma/group/VYEVFSW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287B7Y2", "url": "https://www.orthodb.org/?gene=A0A287B7Y2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13388", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13388", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13388:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13388:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15705", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15705", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF15706", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15706", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16070", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16070", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23039", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23039", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23481", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23481", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23486", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23486", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23487", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23487", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020928079", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020928079", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B7Y2", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Y2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B7Y2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Y2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGQPAGPRVGAAPRAGGGRPELPGRRMRFEGAAPGPVAPLCWALSLVLGALLGRVIEGRGITDNIQRFSSLPPYLPVTYHVLRAETAFFLKETNQDLTRNSSLHSRVASFYPYKARRSPILNASYGPFSVEKVVPLDLMPTSNFLGPTNKFSLHWKLKAHILRDKVYLSRPRVQVLFHVVGRDWDDPGPTQAQRLPCLRVFAFRETREVRGSCRLQGALGLCVAQLELLASWFSPPTVVAGRKKSPEPAEGSPVELYYTVQLGDERGDCAGGDIRKGNAIRPGKEGLEESTAHLQRIGAVHLYRTQDSAQLSELRLDGNVAIWLPSRPVKQGDVVTAYVTVANNSTVDFFILRAKVKKGVNILSTRTSEPRQWDVKQELGNGGKHATTAVVCQRLAPGARNRSSSSFNEVVQMNFEIASFSSLSGTQPITWQVEYPRKGTTDIAVSEIFISQKDLVGIVPLAMDTEVLNTAILTGKTVAMPIKVVSVEENSAVTDISESVECKSTDEDVIKVSDRCDYVFVNGKEMKGKVDAVVNFTYQHLSAPLHVTVWVPRLPLQIEVSDTELSQIKGWRVPIVANKRPTRDSEDEDEEERRGRGCALQYQRATVRVLTQFVSEGAGPWGQPSHLLSPDWQFDITHLVADFMKLEEPHVATLQDSRILVGREVGMTTIQVLSPLSDSILAEKTVTVLDDKVSVTDLAIQLVAGLSVTLRPSTENSKAVTAVATAEELLRTPKQEAVISTWLQFSDGSVTPLDIYDTKDFTLTATSLDEAVVSVPQPRSPRWPVVMAEGEGQGPLVRVDLTIAEACQKNKRKSVLAVGVGSVRVKFGQNDADSSPGGGGDDEEAEIKNHASDRRPKGQDGHFYGSSSSAEREEGALRRGSTTARSLLDNKVVKNSRLDGARLAGEGQLQNIPIDFANFPAQVDLPQAGGGLADGDLVQAPRGLSDLEIGMYALLGVFCLAILVFLINCATFALKYRHKQVPPEGQASMTHSHDWVWLGNEAELLENVGEGSPPQDEHTTIIDRGPGGFEESNRLLLNGGSQKHVQSQIPRPAESGGRQARDQKHEPLHSPTSKRKKVKFTTFTTIPADDGCPTVNSILSGTEEDIKWVCQDVGVSTPKDLRNYLEKFKDKA", "length": 1132, "header": "tr|A0A287B7Y2-1|A0A287B7Y2_PIG Isoform 1 of Transmembrane protein 132C OS=Sus scrofa OX=9823 GN=TMEM132C PE=3 SV=1 CANONICAL=A0A287B7Y2-1" }, "isoforms": [ { "isoform_ac": "A0A287B7Y2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Y2/entry", "sequence": { "sequence": "MGQPAGPRVGAAPRAGGGRPELPGRRMRFEGAAPGPVAPLCWALSLVLGALLGRVIEGRGITDNIQRFSSLPPYLPVTYHVLRAETAFFLKETNQDLTRNSSLHSRVASFYPYKARRSPILNASYGPFSVEKVVPLDLMPTSNFLGPTNKFSLHWKLKAHILRDKVYLSRPRVQVLFHVVGRDWDDPGPTQAQRLPCLRVFAFRETREVRGSCRLQGALGLCVAQLELLASWFSPPTVVAGRKKSPEPAEGSPVELYYTVQLGDERGDCAGGDIRKGNAIRPGKEGLEESTAHLQRIGAVHLYRTQDSAQLSELRLDGNVAIWLPSRPVKQGDVVTAYVTVANNSTVDFFILRAKVKKGVNILSTRTSEPRQWDVKQELGNGGKHATTAVVCQRLAPGARNRSSSSFNEVVQMNFEIASFSSLSGTQPITWQVEYPRKGTTDIAVSEIFISQKDLVGIVPLAMDTEVLNTAILTGKTVAMPIKVVSVEENSAVTDISESVECKSTDEDVIKVSDRCDYVFVNGKEMKGKVDAVVNFTYQHLSAPLHVTVWVPRLPLQIEVSDTELSQIKGWRVPIVANKRPTRDSEDEDEEERRGRGCALQYQRATVRVLTQFVSEGAGPWGQPSHLLSPDWQFDITHLVADFMKLEEPHVATLQDSRILVGREVGMTTIQVLSPLSDSILAEKTVTVLDDKVSVTDLAIQLVAGLSVTLRPSTENSKAVTAVATAEELLRTPKQEAVISTWLQFSDGSVTPLDIYDTKDFTLTATSLDEAVVSVPQPRSPRWPVVMAEGEGQGPLVRVDLTIAEACQKNKRKSVLAVGVGSVRVKFGQNDADSSPGGGGDDEEAEIKNHASDRRPKGQDGHFYGSSSSAEREEGALRRGSTTARSLLDNKVVKNSRLDGARLAGEGQLQNIPIDFANFPAQVDLPQAGGGLADGDLVQAPRGLSDLEIGMYALLGVFCLAILVFLINCATFALKYRHKQVPPEGQASMTHSHDWVWLGNEAELLENVGEGSPPQDEHTTIIDRGPGGFEESNRLLLNGGSQKHVQSQIPRPAESGGRQARDQKHEPLHSPTSKRKKVKFTTFTTIPADDGCPTVNSILSGTEEDIKWVCQDVGVSTPKDLRNYLEKFKDKA", "length": 1132, "header": "tr|A0A287B7Y2-1|A0A287B7Y2_PIG Isoform 1 of Transmembrane protein 132C OS=Sus scrofa OX=9823 GN=TMEM132C PE=3 SV=1 CANONICAL=A0A287B7Y2-1" }, "locus": { "chromosome": "14", "start_pos": 26611411, "end_pos": 26209932, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059253.3", "url": "https://www.ensembl.org/id/ENSSSCT00000059253.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052189.1", "url": "https://www.ensembl.org/id/ENSSSCP00000052189.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 190, "start_aa": "Thr", "end_pos": 190, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr190", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 340, "start_aa": "Thr", "end_pos": 340, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr340", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B7Y2", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Y2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100623362", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623362", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1ML74-1", "protein_name": "Transmembrane protein 132C", "gene_name": "TMEM132C", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRSEGAAPGPVAPLCGALSLVLGALLGRVIEGRGLTDNIQRFSSLPPYLPVTYQVLRAETSFFLKETNQDLTRNSSLQSRVESFFLYKARQPPILNASYGPFSVQKVVPLELMSTSNFLGPTDKVSFNWKLKAHILRDKIYLSRPRVQVLFHLVGRDWDDPSPAQSLPCLRVFAFRETREVRGSCRLRGALGLCVAQLELPASWFGTPTVVAGRKKAPEPPEGSPVELYYAVQPGDERGDCSGGDVRKGNAIRPGKDGLQESTSHLQRISAVGLYRAQDSAQLSELRLDGNVAIWLPSRPVKQGDVVTAYVTVASNSTVDFFILRAKVKKGVNILSTRTSEPRQWDVKQEMGNGGKHATTAVVCQRLAPGARNRSSSLFNEVVQMNFEIASFSSLSGSQPITWQVEYPRRGTTDIAVSEIFISQKDLVGIVPLAMDTEILNTAILTGKTVAMPIKVVTVEENSIVTDISESVECKSTDEEVIKVSDHCDYVFVNGKEMKGKVDVVVNFTYQHLSAPLHVTVWVPRLPLQIEVSDTELSQIKGWRVPIVASKRPTRDSEDEDEEERRGRGCALQYQHAMVRVLTQFVSEGAGPWGQPSHLLSPDWQFDITHLVADFMKLEEPHVATLQDSRILVGREVGMTTIQVLSPLSDSILAEKTVTVLDDKVAVSDLAIQLVAGLSVTLHPSTENSRAITAVATAEELLRAPKQEAVVSTWLQFSDGSVTPLDIYDTKDFTLTATSLDEAIVSVPQPRSPRWPTVMAEGEGQGPLVRVDLTIAEACQKSKRKSVLAVGVGSVRVKFGQNDANSSPGVDYEEGEIKNHASDRRQKAQEGPFYGSSSAEREEGVLRRGNPTAKSLLDNKVGKNSRLDGGRLAGEGQLQTIPIDFANFPAQVDLPQAGSGRGASDLVQTPRGLSDLEIGMYALLGVFCLAILVFLINCATFALKYRHKQVPLEGQASVTHSHDWVWLGNEAELLENVGDSSPPQDEHTTIIDRGPGGFEESNRLLLNGGSQKQGQSQIPRPADSGGKQGRDQKHEPLHSPTSKRKKVKFTTFTTIPADDGCPTVNSILGGTEEDIKWVCQDVGVGAPKELRDYLEKFKDNV", "length": 1101 }, "evidence": [ { "id": "A0A287B7Y2", "url": "https://omabrowser.org/oma/group/A0A287B7Y2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F1LYB3-1", "protein_name": "Transmembrane protein 132C", "gene_name": "Tmem132c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDGVTAATMRSEGAAPRRAARYGALSLVLATLLGQVIESRGVMDNAQRFSSLPPYLPVSFRVLRAETAFFLREANPDPLRNASLQSRTESFFTYKAEQPPILNVSYGPYSAEKVMPLDLMLNPNFLGPTNKFPFDWRLKAYILQEKVYPSHPKVQVLFHIVGRDWDNHRDEKLPCLRIFAFRDTREVRGSCRLGGALGLCVAQLEMLPGWFNPPPVVSGRRRPTEQSEGSPVELYYSVQPGDERGDCTGGDTRKDNAIRPGKDGQEDRTSHLQKIGSISLYRTQDSTQLSELRLDGNVVIWLPSQPVKQGDIVTASVTIANNSTVDHFILRAKVKKGVNILTAQTSEPRQWDVRQEVGNGGKHTTTSVSCQRLGPGARNRSSNLFNEVMQMNFEIASFSSLSGTQPITWQVEYPRKGTTDIAVSEIFISQKDLVAIVPLAMDTELLNTAILTGKTVAMPVRVVSVEENCTVRDISELAECKAMDENVIKVSDHCDYVFVNGKEIKGKVDSVVNFTYQHLSALLHVTVWVPRLPLQIEVSDTELSQIKGWRVPIVASKRPTRDSEEEEEEEQRGRGCALQFQHATVRVLTQFVSESAGPWGQLSHLLSPDWQFDITHLVADFMKLESPHIATLQDSRVLVGREVGMTTIQVLSPLSDSILAEKTVTVLDDKVSVTDLAVQVVAGLSITLHPISENNKATSAVATAEELLRAPKQEAIISTWLQFSDGSVTPLDIYDTKDFSLTAISLDEAVISIPQPLSPWWPTVVAEGEGQGPLLRVDMSIAEACQKSKRKSVLAVGIGHVGVKFGWEDADSGQTGEKDEEEIKNHASDRRQKIQDLERPGQDELHHGNFPGDREEGALLSATTTTKSLLDNNVGKSGRRDGARLHSIPIDFTNFPAHVDLPKAKAGGTLEENGLMQTAHGLSDLEIGMYALLGVFCLAILVFLINCATFAFKYRHKQVPLEGQASMTHSHDWVWLGNEAELLENIGDLSPPQDEHTTIIDRGLGGFEENNHLFLNGGSQKHMQSQVHRPPDSGGWQTREPRQEPANSPTSKMKKVKFATFTIPPEDSCPTVNSILSGEDDVKWVCQDLDVGAPKELRTYLEKFQDSV", "length": 1108 }, "evidence": [ { "id": "A0A287B7Y2", "url": "https://omabrowser.org/oma/group/A0A287B7Y2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8CEF9-1", "protein_name": "Transmembrane protein 132C", "gene_name": "Tmem132c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRSEGAAPRRAARYGALSLVLATLLGQVTESRGVMDNIQRFSSLPPYLPVSFHVLRAETAFFLKEANPDPLRNASLQSRVESFFIYKAQQPPVLNVSYGPYSAEKVIPLDLMLNPNFLGPTSKFPFDWRLKAYILQEKVYLSHPKVQVLFHIVGRDWDDHRDEKLPCLRVFAFRDSREVRGSCRLGGPLGLCVAQLEMLPGWFSPPAVVSGRRRPAERPEGSPVELYYAVQPGDERGDCTGGDTRKDNAIRPGKDGQEGRTSHLQKIGTISLYRAQDSNQLSELRLDGNVVIWLPSQPVKQGDIVTASVTIANNSTVDHFILRAKVKKGVNILTVQTSEPRQWDVRQEVGNGGKHTTTSVACQRLGPGARNRSSNLFSEVMQMNFEIASFSSLSGTQPITWQVEYPRKGATDIAVSEIFISQKDLVAIVPLAMDTELLNTAILTGKTVAMPVRVVSVEENSTLRDISELVECKATDENVIKVSDHCDYVFVNGKEIKGKMDSVVNFTYQHLSAPLHVTVWVPRLPLQIEVSDTELSQVKGWRVPIVASKRPTRDSEEEEEEEQKGRGCTLQFQHATVRVLTQFVSEGAGPWGQLSHLLSPDWQFDITHLVADFMKLESPHIATLQDSRVLVGREVGMTTIQVLSPLSDSILAEKTVTVLDDKVSVTDLAVQVVAGLSVTLHPISENNKATSAVAMAEELLRAPKKEAIISTWLQFSDGSVTPLDIYDSKDFSLTAISLDEAVVSIPQPLSPWWPTVVAEGEGQGPLLRVDMSIAEACQKSKRKSVLAVGIGHVGVKFGWDDADSSQTGEKDEEEIKNHASDRRQKIQDLERPGQDELYHGNFPGDREEGALSATTTTKSLLDNNVGKSGRRDGARLHSIPIDFTNFPAHVDLPKAKTRGTLEENGLMQTAHGLSDLEIGMYALLGVFCLAILVFLINCATFAFKYRHKQVPLEGQASMTHSHDWVWLGNEAELLENIGDLSPPQDEHTTIIDRGLGGCEENNHLLLNGGSQKPTQSQVHRPPGSGGRQTREPRQEPANSPTSKMKKVKFATFTIPPEESCPTVNSILSGEDDIKWVCQDLDVGAPKELRTYLEKFQDSV", "length": 1099 }, "evidence": [ { "id": "A0A287B7Y2", "url": "https://omabrowser.org/oma/group/A0A287B7Y2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8N3T6-1", "protein_name": "Transmembrane protein 132C", "gene_name": "TMEM132C", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRSEGAAPGPAAPLCGALSLLLGALLGKVIEGHGVTDNIQRFSSLPPYLPVSYHILRAETSFFLKEANQDLLRNSSLQARVESFFTYKTRQPPVLNASYGPFSVEKVVPLDLMLTSNFLGPTNKFSFDWKLKAHILRDKVYLSRPKVQVLFHIMGRDWDDHGAGEKLPCLRVFAFRETREVRGSCRLKGDLGLCVAELELLSSWFSAPTVGAGRKKSMDQPEGTPVELYYTVHPGNERGDCAGGDFRKGNAIRPGKDGLEETTSHLQRIGTVGLYRAQDSAQLSELRLDGNVVIWLPSRPVKQGEVVTAYVTISSNSSVDLFILRAKVKKGVNILSAQTREPRQWGVKQEVGSGGKHVTATVACQRLGPSPRNRSSSLFNEVVQMNFEIASFSSLSGTQPITWQVEYPRKGTTDIAVSEIFVSQKDLVGIVPLAMDTEILNTAVLTGKTVAMPIKVVSVEENSAVMDISESVECKSTDEDVIKVSERCDYIFVNGKEIKGKMDAVVNFTYQYLSAPLCVTVWVPRLPLQIEVSDTELSQIKGWRVPIVTNKRPTRESEDEDEEERRGRGCALQYQHATVRVLTQFVSEGAGPWGQPNYLLSPNWQFDITHLVADFMKLEEPHVATLQDSRVLVGREVGMTTIQVLSPLSDSILAEKTITVLDDKVSVTDLAIQLVAGLSVALYPNAENSKAVTAVVTAEEVLRTPKQEAVFSTWLQFSDGSVTPLDIYDTKDFSLAATSQDEAVVSVPQPRSPRWPVVVAEGEGQGPLIRVDMTIAEACQKSKRKSILAVGVGNVRVKFGQNDADSSPGGDYEEDEIKNHASDRRQKGQHHERTGQDGHLYGSSPVEREEGALRRATTTARSLLDNKVVKNSRADGGRLAGEGQLQNIPIDFTNFPAHVDLPKAGSGLEENDLVQTPRGLSDLEIGMYALLGVFCLAILVFLINCATFALKYRHKQVPLEGQASMTHSHDWVWLGNEAELLESMGDAPPPQDEHTTIIDRGPGACEESNHLLLNGGSHKHVQSQIHRSADSGGRQGREQKQDPLHSPTSKRKKVKFTTFTTIPPDDSCPTVNSIVSSNDEDIKWVCQDVAVGAPKELRNYLEKLKDKA", "length": 1108 }, "evidence": [ { "id": "A0A287B7Y2", "url": "https://omabrowser.org/oma/group/A0A287B7Y2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "X2JEB0-1", "protein_name": "Detonator, isoform E", "gene_name": "dtn", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MMRYCLIIALQLSLAYSVEVHFEAPDSGFFLKHARQPPVTPEIANVQTSSAVPPLRQRSSYDSVLSLDRFTVVETTQPVSIRASYGPFSTKQTVPARYIVPDTMDSQSGDYMNNATLLELQQPNMHLDISAHLVRSSVSQDAPVLRVLFHAGADPGGHLQRQKVCVLLHVAMGSEQPLKGRCMPEGEDGVCVAEVVVPLGWWPQLPAPTQDGSGQAPPKVPQRYAQVSYSVFEPPLRNPEQCEPKVQIQPLTTFAQVPLLAARTPYRMLRADDAVTFLLPQHPLYPLSRLHVPVFLHQYPDQRVAAFTVRARVKAGLKILGATASTDQWSVSVEKENPKHTTARVTAFRKEAESSLESGGNLTSEVFEVFSWLLEVAEDTNDIVDGGKIVWSVTHVYDTPKDKDSGELVIPDDNKKRLIAKLEINKDDIQAVLPMAKIWEVMNTAVLTGRQVAQAMKVFIVSQAGKVADVTLQSSCHAEDESVIKVSSSCSSVYVDGSEQRGSSNASVIVKYGTYVGVAKFIVWMPEFPLEVYISDFRLSQIKGWKVTDDNHYLHNKQSRRRKKRSYVWGQHGTNYYNNLGADKTICRARYQQSPVEVYAKFLAVDQNSGRTSYFISRRTGLRVTDLVQPLLRVADPKIASLKGRILQGKSMGRTDVQVLSPITGRVIGTKEIRVGSDKVNLSKLIVRVISGLQLTISPDNTIENGYLAETSVTHKLTAQYQEGLLDIDLEFTDGSKTPLRDIAVEDYFLLVESLDTEVVAFAPMLASHHPRVIAVGEGNGNLLRVTLLLSEECRQRRGTLSSSKQNKSNAAPLASALASIEVDFNNVDIVSKQEAIQNDGTVGRERKNYRQTGDLADIIVGIPLRDSSQLYEPTVQARQHRGSIQAVHKGHHGKGLAGTGTMTTMELGMYVLLTAFCFAIIVFVISCVVYASKFRPAMIESGLDPLSAGKSNGSGGSGGFRDVRLKESTTNAHDWVWLGRSTIDRQSIVAETNTHLNPRDSRMRITSNPIVNYDNGRRVSSFDQQPKLQTHIVPASNLNKQHADHYLANERKDNALDYKPPVPPHRNVGARACLPVQPVLGTGSVKDAAPNKRHSQLYRREHLQNSDSNANSQQSTPQPNQQLPTERPHPLAQAHPHPHPHQHQRSHSHSHNFSQEPLIKAAHNKIKQQQQQQQQQQHEELHNAEKLVEYTNPHQKNAFQFDSLTPKRVTKAAASSPATPSTSAVQGKAKENHSMASSTGDAANSNGTDEIIRLPASAVSQEPTTKSSRVKRATVVGNPMFSATVDESVAPGERLGLDDLDMDYEQIMHYFDNLKESNAXVQEIIAKIREILSTFHHRYQTVATPLTSPTRQQMQLLDELVAGVATATAITAAKPTPLVLDGGEGDESADAFDAYDGALDIESRQF", "length": 1407 }, "evidence": [ { "id": "A0A287B7Y2", "url": "https://omabrowser.org/oma/group/A0A287B7Y2/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A287B7Y2", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Y2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 100, "end_pos": 102, "annotation": "n_glycosylation_sequon" }, { "start_pos": 122, "end_pos": 124, "annotation": "n_glycosylation_sequon" }, { "start_pos": 343, "end_pos": 345, "annotation": "n_glycosylation_sequon" }, { "start_pos": 344, "end_pos": 346, "annotation": "n_glycosylation_sequon" }, { "start_pos": 401, "end_pos": 403, "annotation": "n_glycosylation_sequon" }, { "start_pos": 535, "end_pos": 537, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287B7Y2-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1132, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287B7Y2-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287B7Y2" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287B7Y2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Y2" }, { "id": "PF15706", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15706" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Transmembrane protein TMEM132 C-terminal", "eco_id": "ECO_0000259", "start_pos": 918, "end_pos": 1003, "start_aa": "Asn", "end_aa": "Glu", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A287B7Y2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Y2" }, { "id": "PF15705", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15705" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Transmembrane protein TMEM132 N-terminal", "eco_id": "ECO_0000259", "start_pos": 77, "end_pos": 139, "start_aa": "Val", "end_aa": "Met", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A287B7Y2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Y2" }, { "id": "PF23039", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23039" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Transmembrane protein TMEM132 cohesin-like", "eco_id": "ECO_0000259", "start_pos": 310, "end_pos": 455, "start_aa": "Gln", "end_aa": "Leu", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A287B7Y2", "database": "UniProtKB", "url": 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[], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 100, "end_pos": 102 }, { "start_pos": 122, "end_pos": 124 }, { "start_pos": 343, "end_pos": 345 }, { "start_pos": 344, "end_pos": 346 }, { "start_pos": 401, "end_pos": 403 }, { "start_pos": 535, "end_pos": 537 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", 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"https://www.uniprot.org/uniprotkb/A0A287B7Z2", "locus": {} } ], "crossref": [ { "id": "A0A287B7Z2", "url": "https://alphafold.ebi.ac.uk/entry/A0A287B7Z2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000033351", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000033351", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07765", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07765", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001909", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001909", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036051", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036051", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24381", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24381", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24381:SF304", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24381:SF304", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01352", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01352", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-212436", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9843940", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9843940", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287B7Z2", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Z2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B7Z2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Z2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MATSVPKATAQGHVTFEDVAVSFSQEEWGLLSEAQRLLYCDVMLENLSLVASLDCWHGGEAEEAIPEQCVSIEQVAQARNPKLDPSFLKTLTSDTYALVAKDALFLAEHQGVYPGPKQSFPGACRKMFTSHLQQHQKQLRGEKQLRREENGTMLVTSCQVLVSDNMFTCREVEKDFLGSLGFLQHQPTCNGEHPRRRRKSREVSYPGQRHYECSECGKAFTKKYKFTEHQRVHTGEKPYECNDCGKFFRLRGGLSHHQRVHTGEKPFDCSKCGKVFIYKCKLVQHQRVHTGERPYECNECGKAYARKDSLVQHQKVHTGEKPHKCSECGKPFLYRNKLLVHQRIHTGEKPFKCTECGKSFSYKTSLIIHQRTHTGERPYMCSECGKAYVNKKSLVVHQRIHTGEKVYECKKCGNVFTSSFALNKHQIVHTTQRPYECSECGKAFKRKIRLVEHQRIHTGERPYECHQCGKAFKLKNTLVSHRNVHIRSKPFKCSECGKPYSNKTSLVVHQRIHTGVKPFQCNECGKPYSYKTSLIVHQRIHRGEKPYEHSSL", "length": 552, 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"https://www.uniprot.org/uniprotkb/A0A287B822", "locus": {} } ], "crossref": [ { "id": "A0A287B822", "url": "https://alphafold.ebi.ac.uk/entry/A0A287B822", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000031300", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000031300", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR000834", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000834", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050821", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050821", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR12756", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12756", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12756:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12756:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "A0A287B822", "url": "https://www.uniprot.org/uniprotkb/A0A287B822", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B822-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B822-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLNPDGVYLGNYRCSLMGFDLNRHWLDPSPWAHPTLHGVKQLIIQMYNDPKTSLEFYIDIHAHSTMTNGFMYGNIFEDEERFQRQAVFPKLLCQNAEDFSYSSTSFNRDAVKAGTGRRFLGGLLDHTSYCYTLEVSFYSYILGGTTDAVPYTEEAYMKLGRNVARTFLDYYRLNPMVEKVAIPMPRLRPDAEPEASGEMRPAGDTANLAYRRCSAADLIYTTV", "length": 223, "header": "tr|A0A287B822-1|A0A287B822_PIG Isoform 1 of Peptidase M14 domain-containing protein OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A287B822-1" }, "isoforms": [ { "isoform_ac": "A0A287B822-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B822/entry", "sequence": { "sequence": "MLNPDGVYLGNYRCSLMGFDLNRHWLDPSPWAHPTLHGVKQLIIQMYNDPKTSLEFYIDIHAHSTMTNGFMYGNIFEDEERFQRQAVFPKLLCQNAEDFSYSSTSFNRDAVKAGTGRRFLGGLLDHTSYCYTLEVSFYSYILGGTTDAVPYTEEAYMKLGRNVARTFLDYYRLNPMVEKVAIPMPRLRPDAEPEASGEMRPAGDTANLAYRRCSAADLIYTTV", "length": 223, "header": "tr|A0A287B822-1|A0A287B822_PIG Isoform 1 of Peptidase M14 domain-containing protein OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A287B822-1" }, "locus": { "chromosome": "6", "start_pos": 163216188, "end_pos": 163084759, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061600.3", "url": "https://www.ensembl.org/id/ENSSSCT00000061600.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052224.1", "url": "https://www.ensembl.org/id/ENSSSCP00000052224.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B822", "url": "https://www.uniprot.org/uniprotkb/A0A287B822" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", 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Isoform 1 of Glucosidase alpha, neutral C OS=Sus scrofa OX=9823 GN=GANC PE=3 SV=2 CANONICAL=A0A287B841-1" }, "locus": { "chromosome": "1", "start_pos": 129097427, "end_pos": 129023065, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038692.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038692.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052278.2", "url": "https://www.ensembl.org/id/ENSSSCP00000052278.2" } ] } }, { "isoform_ac": "A0A4X1UXD1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UXD1/entry", "sequence": { "sequence": "MEAAGKEEISVEDEAVDKNIFKDCSKIAFYRRQKQQLSKKSTYRALLDSVTTGKDSTRFQIINEVAKVRCQDQSTPALGAFKGEEATVREDPQELSTRQHGAQEGAEELDKQGQFMQKISNMAPKTENLEDHLEQTPCSACLQVFTRDSTSSSVSKDAGISLNVPLASSSKPQENGTVPNQPPPQQMRNNYHLLTRTVSAETARHRQLTWELDRLIVLGEQANAQHELASILHRESVLAINQLAATVEGALSALQQFSKLLNQSLNPGKY", "length": 270, "header": "tr|A0A4X1UXD1-1|A0A4X1UXD1_PIG Computationally mapped isoform of Glucosidase alpha, neutral C OS=Sus scrofa OX=9823 GN=GANC PE=4 SV=1 CANONICAL=A0A287B841-1" }, "locus": { "chromosome": "1", "start_pos": 129097427, "end_pos": 129089777, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038501.2", "url": "https://www.ensembl.org/id/ENSSSCT00000038501.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058124.2", "url": "https://www.ensembl.org/id/ENSSSCP00000058124.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 363, "start_aa": "Thr", "end_pos": 363, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr363", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B841", "url": "https://www.uniprot.org/uniprotkb/A0A287B841" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100513637", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513637", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "alpha-1,4-glucosidase activity", "id": "GO:0004558", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004558", "evidence": [ { "database": "UniProtKB", "id": "A0A287B841", "url": "https://www.uniprot.org/uniprotkb/A0A287B841" } ], "pmid": "" }, { "name": "carbohydrate binding", "id": "GO:0030246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030246", "evidence": [ { "database": "UniProtKB", "id": "A0A287B841", "url": "https://www.uniprot.org/uniprotkb/A0A287B841" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "carbohydrate metabolic process", "id": "GO:0005975", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005975", "evidence": [ { "database": "UniProtKB", "id": "A0A287B841", "url": "https://www.uniprot.org/uniprotkb/A0A287B841" } ], "pmid": "" }, { "name": "N-glycan processing", "id": "GO:0006491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006491", "evidence": [ { "database": "UniProtKB", "id": "A0A287B841", "url": "https://www.uniprot.org/uniprotkb/A0A287B841" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 309, "end_pos": 311, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287B841-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 937, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287B841-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287B841" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287B841", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B841" }, { "id": "PF13802", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13802" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Glycoside hydrolase family 31 N-terminal", "eco_id": "ECO_0000259", "start_pos": 96, "end_pos": 315, "start_aa": "Glu", "end_aa": "Val", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A287B841", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B841" }, { "id": "PF01055", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01055" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Glycoside hydrolase family 31 TIM barrel", "eco_id": "ECO_0000259", "start_pos": 379, "end_pos": 706, "start_aa": "Ala", "end_aa": "Leu", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A287B841", "database": "UniProtKB", "url": 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Inhibits the splicing activity of SFRS1, SFRS2 and SFRS6. Augments the splicing activity of SFRS3.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B859", "url": "https://www.uniprot.org/uniprotkb/A0A287B859#function" }, { "database": "UniProtKB", "id": "ARBA00058989", "url": "https://www.uniprot.org/uniprotkb/ARBA00058989#function" }, { "database": "UniProtKB", "id": "A0A4X1UHI5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UHI5#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287B859", "url": "https://www.uniprot.org/uniprotkb/A0A287B859" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SREK1", "url": "https://www.uniprot.org/uniprotkb/A0A287B859", "locus": { "chromosome": "16", "start_pos": 44620094, "end_pos": 44578783, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": 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"categories": [ "Protein Classification" ] }, { "id": "PTHR32343:SF71", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32343:SF71", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00076", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00076", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020932686", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020932686", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B859", "url": "https://www.uniprot.org/uniprotkb/A0A287B859", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B859-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B859-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UHI5", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UHI5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UHI5-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UHI5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNSGGGFGLGLGFGLTPTAVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPAPTMTGLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSRSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSRSRDKRKDTREKIKEKERVKEKDREKEREKERDREKEREKEKERGKNKDKDRDKEREKDRDKDKEKDRDREREKEHEKERDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSTRKSSNDRDGKEKAEKNSTSLKEKEHNKEPDSNVGKEVDDKDPPPRTEENKVQQNGNCQPNEENLSTKTEAV", "length": 631, "header": "tr|A0A287B859-1|A0A287B859_PIG Isoform 1 of Splicing regulatory glutamine/lysine-rich protein 1 OS=Sus scrofa OX=9823 GN=SREK1 PE=1 SV=1 CANONICAL=A0A287B859-1" }, "isoforms": [ { "isoform_ac": "A0A287B859-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B859/entry", "sequence": { "sequence": "MNSGGGFGLGLGFGLTPTAVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPAPTMTGLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSRSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSRSRDKRKDTREKIKEKERVKEKDREKEREKERDREKEREKEKERGKNKDKDRDKEREKDRDKDKEKDRDREREKEHEKERDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSTRKSSNDRDGKEKAEKNSTSLKEKEHNKEPDSNVGKEVDDKDPPPRTEENKVQQNGNCQPNEENLSTKTEAV", "length": 631, "header": "tr|A0A287B859-1|A0A287B859_PIG Isoform 1 of Splicing regulatory glutamine/lysine-rich protein 1 OS=Sus scrofa OX=9823 GN=SREK1 PE=1 SV=1 CANONICAL=A0A287B859-1" }, "locus": { "chromosome": "16", "start_pos": 44618062, "end_pos": 44578823, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041039.2", "url": "https://www.ensembl.org/id/ENSSSCT00000041039.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052655.2", "url": "https://www.ensembl.org/id/ENSSSCP00000052655.2" } ] } }, { "isoform_ac": "A0A4X1UHI5-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UHI5/entry", "sequence": { "sequence": "MTGLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSRSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSRSRDKRKDTREKIKEKERVKEKDREKEREKERDREKEREKEKERGKNKDKDRDKEREKDRDKDKEKDRDREREKEHEKERDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSTRKSSNDRDGKEKAEKNSTSLKEKEHNKEPDSNVGKEVDDKDPPPRTEENKVQQNGNCQPNEENLSTKTEAV", "length": 515, "header": "tr|A0A4X1UHI5-1|A0A4X1UHI5_PIG Computationally mapped isoform of Splicing regulatory glutamine/lysine-rich protein 1 OS=Sus scrofa OX=9823 GN=SREK1 PE=1 SV=1 CANONICAL=A0A287B859-1" }, "locus": { "chromosome": "16", "start_pos": 44618062, "end_pos": 44593926, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052180.1", "url": "https://www.ensembl.org/id/ENSSSCT00000052180.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038239.1", "url": "https://www.ensembl.org/id/ENSSSCP00000038239.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B859", "url": "https://www.uniprot.org/uniprotkb/A0A287B859" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100511789", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511789", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Y813-1", "protein_name": "Splicing regulatory glutamine/lysine-rich protein 1", "gene_name": "SREK1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MMNSGGIGVPLGFPLGPTSVIQVTNLSSAVTSEQMRTLFGFLGDIEELRLYPPDNAPLAFSSKVCYIKFREASSVGVAQHLTNTVFIDRALIVVPCAEGKIPDEAKALSLLAPAPTMTSLMPGAGLLPIPTPTPLTTLGVSLGTLGAIPAAALDPNITALGEIPQPPIMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSSERKGGRSRSHSRSESRSSSKSRSRRKRSHSKHRSRSGNRSLSRHKDRRRSRSPLKKRSRSRERRKSRSRSRSRDKKRDKEKVKEKEKTKEKERDRDKEKERDRDRDKEREREREKERNRDKDREKDKDRNKDRERVKDRDRDRDKEREKEKDEKEKDREDVDQNKEKDDDRDGERDREKMKDREGDKDKGGDKEKDREKEKEKDGDKEREREKERDDKKKKDKRSRTPPRSYSSSRRSRSSSRERRKRKSRSLSKSPKTSKGTKRKSSRTPSPRRNKKEKKRERDTCNEGRERERSTSKKKSSKEKEGREKSDKSTTTLKDKDHAKEDQNSETDKDVDNRDTQRTDEVKLQQNGNCQPNEDNLSIKMEEV", "length": 671 }, "evidence": [ { "id": "A0A287B859", "url": "https://omabrowser.org/oma/group/A0A287B859/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A2BIN4-1", "protein_name": "Splicing regulatory glutamine/lysine-rich protein 1", "gene_name": "srek1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSGMPGTNVIQITNLSAAVSSDQMRTLFGFLGDIDELRLYPPDNAPLSFSSKVCYIKYREPSSVGVAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPATPVASLMSGGGLLPIPSPSTLQNRSLPLANLGVLKSSLDTSVATLSAVSAQPPLMGNVDPSKVDEIRRTVYVGNLNSQSTTADQLLKFFKQVGDVKFVRMAGDETQPTRFAFVEFADQDSVARALTYNGVMFGDRPLKINHSNNAIVKPPELTPQAAAKELEDVMKKVREAQSTIAAAIEPENELPSSSRSRHSRRSRSHSCSPSNSRRKRSRSRHRGHPSKRSRQRFNDSCGSHRRHSRSRERRRSQSRSHSRGRRKDKDSKGRKDDDWDEKRLRDKTGRSPPKCYVGSRRSRSTSRGHKKRSRSPSRSPRQRARSPTPTKRGKREKKREKGWDSSRERAESSAFRRKSRDSEYKAKPSQRERVYEQMEHEYDSEMDGSGSMVSDDRSPPAHLNGSYRSSYAEEDNLFAAE", "length": 515 }, "evidence": [ { "id": "A0A287B859", "url": "https://omabrowser.org/oma/group/A0A287B859/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E1BDN8-1", "protein_name": "Splicing regulatory glutamine/lysine-rich protein 1", "gene_name": "SREK1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNSAGSFGLGLGFGLTPTAVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSRSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSRSRDKRKDTREKIKEKERVKEKDREKEREKERDREKEREKEKERGKNKDKDRDKEREKDRDKDKDKEKDKERERDKDHEKERDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKEKDHISERRERERSASTRKSSNDREGKDKVEKNNTSLKEKEHNKEPDSSVGKEVDDKDAPRTEENKVQQNGNCQPNEENLSAKTEAV", "length": 632 }, "evidence": [ { "id": "A0A287B859", "url": "https://omabrowser.org/oma/group/A0A287B859/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3H4M8-1", "protein_name": "Splicing regulatory glutamine/lysine-rich protein 1", "gene_name": "Srek1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MNSGGGFGLGLGFGLFPTAVIQVTNLSSAVTSEQMRTLFSFLGDIEELRLYPPDNTPLAFSSKVCYIKFRDPSSVGVAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPAPTMTSLVPGAGLLPIPTSSPLTAVSSLGVSLSSLGAIPAAALDPNITTLGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSRSRDKRKDTREKVKEKERVKEREREKEKEREREKDREKDKERGKNKDKDREKEKDHEKERDKDKEKDQDKDKEREKDKSKEADEKRKKDKKSRTPPRSYNASRRSRSTSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRGRNKKDKKREKERDHISDRRERERSTSTKKSSNDGKEKVEKTNTPVKKEHSKEADSSVSQDTDEKDPPRTEEENKVQQNGNCQPSEESLCSKADVV", "length": 611 }, "evidence": [ { "id": "A0A287B859", "url": "https://omabrowser.org/oma/group/A0A287B859/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8BZX4-1", "protein_name": "Splicing regulatory glutamine/lysine-rich protein 1", "gene_name": "Srek1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTSLVPGAGLLPIPTSSPLTAVSSLGVSLSSLGAIPAAALDPNITTLGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSRSRDKRKDTREKVKERVKEKEREKEREREKDREKDKERGKNKDKDREKEKDHEKERDKEKEKEQDKDKEREKDRSKETDEKRKKEKKSRTPPRSYNASRRSRSTSRERRRRRSRSSSRSPRTSKTVKRKSSRSPSPRGRNKKEKKREKERDHISDRRERERSTSTKKSSGDRDGKEKVEKSTTPVKEKEHSKESDATVSKAADEKGSPRTEDEGKVQHNGNCQPNEESPCSKADAV", "length": 494 }, "evidence": [ { "id": "A0A287B859", "url": "https://omabrowser.org/oma/group/A0A287B859/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8WXA9-1", "protein_name": "Splicing regulatory glutamine/lysine-rich protein 1", "gene_name": "SREK1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPRTEENKIQHNGNCQLNEENLSTKTEAV", "length": 508 }, "evidence": [ { "id": "A0A287B859", "url": "https://omabrowser.org/oma/group/A0A287B859/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9JKL7-1", "protein_name": "Splicing regulatory glutamine/lysine-rich protein 1", "gene_name": "Srek1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTSLVPGAGLLPIPTSSPLTAVSSLGVSLSSLGAIPAAALDPNITALGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRARSKSPHKKRSKSRERRKSRSRSRSRDKRKDTREKVKERVKEREREKEKEREKEREKDKERGKNKDKDREKEKDHEKERDKEKEKEQDKDKEREKDRSKEADEKRKKEKKSRTPPRSYNSSRRSRSASRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRGRNKKEKKREKERDHISDRRERERSTSTKKSSSDRDGKEKVEKTNTPVKEKEHSKEADSTVSTDADEKDTARTEEESKAQHNGNCQPHEERLCSTADAV", "length": 494 }, "evidence": [ { "id": "A0A287B859", "url": "https://omabrowser.org/oma/group/A0A287B859/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "A0A287B859", "url": "https://www.uniprot.org/uniprotkb/A0A287B859" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A287B859", "url": "https://www.uniprot.org/uniprotkb/A0A287B859" } ], "pmid": "" }, { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "A0A287B859", "url": "https://www.uniprot.org/uniprotkb/A0A287B859" } ], "pmid": "" }, { "name": "spliceosomal complex", "id": "GO:0005681", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005681", "evidence": [ { "database": "UniProtKB", "id": "A0A287B859", "url": "https://www.uniprot.org/uniprotkb/A0A287B859" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "mRNA processing", "id": "GO:0006397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006397", "evidence": [ { "database": "UniProtKB", "id": "A0A287B859", "url": "https://www.uniprot.org/uniprotkb/A0A287B859" } ], "pmid": "" }, { "name": "RNA splicing", "id": "GO:0008380", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008380", "evidence": [ { "database": "UniProtKB", "id": "A0A287B859", "url": "https://www.uniprot.org/uniprotkb/A0A287B859" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 254, "end_pos": 256, "annotation": "n_glycosylation_sequon" }, { "start_pos": 25, "end_pos": 27, "annotation": "n_glycosylation_sequon" }, { "start_pos": 339, "end_pos": 341, "annotation": "n_glycosylation_sequon" }, { "start_pos": 491, "end_pos": 493, "annotation": "n_glycosylation_sequon" }, { "start_pos": 576, "end_pos": 578, "annotation": "n_glycosylation_sequon" }, { "start_pos": 623, "end_pos": 625, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287B859-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 631, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287B859-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287B859" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287B859", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B859" }, { "id": "PS50102", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50102" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RRM", "eco_id": "ECO_0000259", "start_pos": 19, "end_pos": 98, "start_aa": "Ala", "end_aa": "Glu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 254, "end_pos": 256 }, { "start_pos": 25, "end_pos": 27 }, { "start_pos": 339, "end_pos": 341 }, { "start_pos": 491, "end_pos": 493 }, { "start_pos": 576, "end_pos": 578 }, { "start_pos": 623, "end_pos": 625 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"id": "ENSSSCT00000054752.3", "url": "https://www.ensembl.org/id/ENSSSCT00000054752.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052361.2", "url": "https://www.ensembl.org/id/ENSSSCP00000052361.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": 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"title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B9L8", "url": "https://www.uniprot.org/uniprotkb/A0A287B9L8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1ADT3-1", "protein_name": "Transmembrane protein 221", "gene_name": "TMEM221", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPSYPQRTLTVLLLFGTLSAAMALLASSLIFQLPAGRTSPGSGPGAVRGALPESAAAVLLPVSAVLAALCLVLNVSCLLLCLLHGYFSTELCRGQPGPERADWFLLDSRTVRHAAIGLFCCGVSVYLTALAIYMLLLFELEAGIASACILSSGIIVLLVTVTHALLRASQLSRRSRSEISHTLYENDSAQHSETPGSNLNNKSTAVPRPRPEIHREFSFPPFLEHKSQLGSPASSNLTSSGSPGAHSEKESYHLPRTHRTLSAESALLQAQGKPWNGVTHEMRNVLARKPGASGKDSTLV", "length": 300 }, "evidence": [ { "id": "A0A287B9L8", "url": "https://omabrowser.org/oma/group/A0A287B9L8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A6NGB7-1", "protein_name": "Transmembrane protein 221", "gene_name": "TMEM221", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"url": "https://omabrowser.org/oma/group/A0A287B9L8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E7EXZ1-1", "protein_name": "Transmembrane protein 221", "gene_name": "tmem221", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTHSYSQRSLVILAFLGILSSIMAVLSVILIFQLQTQQAVIKDSPTFVPKDITAVLLPVSTVLSALSLTLNLSSVVVCLLHSYFATEICRGEPDTQRADWFLMDSRAVRHVTIGLFCLGVSVYLAAMSIYMVLVFEVETGIASVCVLSSGVLVLLLIIIHSLIRAARAAKHYRTDHLHTMYHNNPEQIRTSNLSIMENPRRQHSLANLPSHFINPAHMEPKSQYSTSNGPQAHSSDKDGCSGSGRTHRTLSTESGLFHAQAKPWNGVNSEMRSVLARKATIKDSTLV", "length": 287 }, "evidence": [ { "id": "A0A287B9L8", "url": "https://omabrowser.org/oma/group/A0A287B9L8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ 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"url": "https://www.ensembl.org/id/ENSSSCG00000031799" } ] } } ], "crossref": [ { "id": "A0A287B9U6", "url": "https://alphafold.ebi.ac.uk/entry/A0A287B9U6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000031799", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000031799", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100521303", "url": "https://www.ncbi.nlm.nih.gov/gene/100521303", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR038805", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038805", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100521303", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521303", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FYEDNWT", "url": "https://omabrowser.org/oma/group/FYEDNWT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287B9U6", "url": 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"url": "https://www.ebi.ac.uk/interpro/entry/IPR001611", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003591", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003591", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015753", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015753", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029423", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029423", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032754", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032754", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR23045", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23045", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23045:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23045:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13855", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13855", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14914", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14914", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF15779", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15779", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287B9V6", "url": "https://www.uniprot.org/uniprotkb/A0A287B9V6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9V6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9V6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"length": 1493, "header": "tr|A0A287B9V6-1|A0A287B9V6_PIG Isoform 1 of Leucine-rich repeat-containing protein 37A2 OS=Sus scrofa OX=9823 GN=LOC100626147 PE=4 SV=3 CANONICAL=A0A287B9V6-1" }, "isoforms": [ { "isoform_ac": "A0A287B9V6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9V6/entry", "sequence": { "sequence": 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"length": 1493, "header": "tr|A0A287B9V6-1|A0A287B9V6_PIG Isoform 1 of Leucine-rich repeat-containing protein 37A2 OS=Sus scrofa OX=9823 GN=LOC100626147 PE=4 SV=3 CANONICAL=A0A287B9V6-1" }, "locus": { "chromosome": "12", "start_pos": 17963048, "end_pos": 17925225, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063247.3", "url": "https://www.ensembl.org/id/ENSSSCT00000063247.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052868.3", "url": "https://www.ensembl.org/id/ENSSSCP00000052868.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 275, "start_aa": "Thr", "end_pos": 275, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr275", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287B9V6", "url": "https://www.uniprot.org/uniprotkb/A0A287B9V6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 1165, "end_pos": 1167, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1432, "end_pos": 1434, "annotation": "n_glycosylation_sequon" }, { "start_pos": 546, "end_pos": 548, "annotation": "n_glycosylation_sequon" }, { "start_pos": 572, "end_pos": 574, "annotation": "n_glycosylation_sequon" }, { "start_pos": 763, "end_pos": 765, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287B9V6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B9V6" }, { "id": "PF14914", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14914" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "LRRC37A/B like protein 1 C-terminal", "eco_id": "ECO_0000259", "start_pos": 1244, "end_pos": 1386, "start_aa": "Ser", "end_aa": "Leu", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A287B9V6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287B9V6" }, { "id": "PF15779", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15779" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Leucine-rich repeat-containing protein 37 N-terminal", "eco_id": "ECO_0000259", "start_pos": 87, "end_pos": 136, "start_aa": "Thr", "end_aa": "Pro", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 275 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], 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"database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDDWKSRLVIKSMLPHFAMVGNRQEPRKLQESGTIKRRQEGDNFQLSGMADGGYPNKIKRPCLEDVTLSLGPGAHPSTPCPELQVPALAMNPSSAALGTASHALLLETNPMNGGVMGSPFVVPPTAEMGLKGPPLPYYDKSNSVPAVDQELQDLLEELTKIQEPSPSELDLEKILGSKPEEPLVLDPGPAALGATPKPAVQMPPLESLASGKDFASSCSQVTGVSLPIPPSSVGVSYGVPSTSKQMASPSSSTAQAQSQVPAMLPAALPPLPVPQWHHAHQLKALAASKQGSSAKQPGPTTSWSGLPPPGLSPPYRPGPSPHPPQPFSPQGLMGSCMSSSSLPGSTLHGSPGALLSSGAPSSSSALGPALPYAPEKLPSPALHQQPQFSPQNSILAHLVSSGIKTPQGHLMSALPTSTPGPATPYRPEKLASPGLPQQSFTPQCPLVRSLTPTTHPLSQPLPQAKASFKPMATTSPKSLSVIMQQGLASPGPGAPEPFTFSNTKPLSHFVSEPGPQRLPSVPAPSRQPALLHYLQQPTPTQASSATASSTATATLQLQQQQQQQQQQQPDHSSFLLQQVMQQPQRLQRSVASDAVPSLPRQACCHLFSWTSAAGSGERQHQHWNPYPSRQEPQPGDVSASNITHVDKACKLGEARPPQVSLGRQPPSCQALGSESFLPGSSFAQELARVTSSYSTSEAAPWGGWDPKAWRQQVPAPLLPRCDAVARETEIRSYGNDP", "length": 737, "header": "tr|A0A287BA19-1|A0A287BA19_PIG Isoform 1 of Mastermind like domain containing 1 OS=Sus scrofa OX=9823 GN=MAMLD1 PE=4 SV=1 CANONICAL=A0A287BA19-1" }, 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"tr|A0A8W4F7T4-1|A0A287BA19_PIG Computationally mapped isoform of Mastermind like domain containing 1 OS=Sus scrofa OX=9823 GN=MAMLD1 PE=4 SV=1 CANONICAL=A0A287BA19-1" }, "locus": { "chromosome": "X", "start_pos": 122233398, "end_pos": 122229062, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000101818.1", "url": "https://www.ensembl.org/id/ENSSSCT00000101818.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075346.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075346.1" } ] } }, { "isoform_ac": "F1RQ29-1", "url": "https://www.uniprot.org/uniprotkb/F1RQ29/entry", "sequence": { "sequence": "MDDWKSRLVIKSMLPHFAMVGNRQEPRKLQESGTIKRRQEGDNFQLSGMADGGYPNKIKRPCLEDVTLSLGPGAHPSTPCPELQVPALAMNPSSAALGTASHALLLETNPMNGGVMGSPFVVPPTAEMGLKGPPLPYYDKSNSVPAVDQELQDLLEELTKIQEPSPSELDLEKILGSKPEEPLVLDPGPAALGATPKPAVQMPPLESLASGKDFASSCSQVTGVSLPIPPSSVGVSYGVPSTSKQMASPSSSTAQAQSQVPAMLPAALPPLPVPQWHHAHQLKALAASKQGSSAKQPGPTTSWSGLPPPGLSPPYRPGPSPHPPQPFSPQGLMGSCMSSSSLPGSTLHGSPGALLSSGAPSSSSALGPALPYAPEKLPSPALHQQPQFSPQNSILAHLVSSGIKTPQGHLMSALPTSTPGPATPYRPEKLASPGLPQQSFTPQCPLVRSLTPTTHPLSQPLPQAKASFKPMATTSPKSLSVIMQQGLASPGPGAPEPFTFSNTKPLSHFVSEPGPQRLPSVPAPSRQPALLHYLQQPTPTQASSATASSTATATLQLQQQQQQQQQQQPDHSSFLLQQVMQQPQRLQRSVASDAVPSLPRQTHVDKACKLGEARPPQVSLGRQPPSCQALGSESFLPGSSFAQELARVTSSYSTSEAAPWGGWDPKAWRQQVPAPLLPRCDAVARETEIRSYGNDP", "length": 696, "header": "tr|F1RQ29-1|A0A287BA19_PIG Computationally mapped isoform of Mastermind like domain containing 1 OS=Sus scrofa OX=9823 GN=MAMLD1 PE=4 SV=4 CANONICAL=A0A287BA19-1" }, "locus": { "chromosome": "X", "start_pos": 122231249, "end_pos": 122183845, "strand": "-", "evidence": [ { 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"https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 540, "start_aa": "Thr", "end_pos": 540, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr540", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4F7T4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F7T4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-350054", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-350054", "resource": "Reactome", "description": "Notch-HLH transcription pathway" }, { "id": "R-SSC-8941856", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8941856", "resource": "Reactome", "description": "RUNX3 regulates NOTCH signaling" } ], "orthologs": [ { "uniprot_canonical_ac": "P0C6A2-1", "protein_name": "Mastermind-like domain-containing protein 1", "gene_name": "Mamld1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDDWKSRLVIENMLPHFNMVGNRQETRKLQESGTSKRRQEGENFHFTGMADGSYPNKIKRPCLEDVTLSMGPGAHPTSLSTEMQMPTLNMNPTSADLGVAGQSLLLENNPLDSNVVNSSAMGSPFGVPSTADTGLKGHAVPYYEKNNSMPAVDQELQDLLEELTKIQEPSSNDLDLEKILGSKPEEPLVLHNPQAPLGPPAKLPVQMPHMESLGSSKEFASSCSQVAGTSLPIMPSSTGMSYSIPSSSKQIVSSSSSTAQAQVKNQVQNMLPVTMPPLSVPQWHHAHQLKALAASKQGSATKQGSNRNWSSLPPPGLSPPYLPVPSPHPPPPQPPPPPFSPQNFTASCMSSSSLSGSAVQSSPNALLSSMAPSSNASLGPTLPYVPAKLPGLPLNQQPQFSPQSSILANLVSSSVKSPQGHLISALPTSTPGPSPPYRPENLSSPGLPQQSFTPQYSLIRSLTPTSNLLSQQQQQQQQQQQQQQQQQQQQQQQQHQANSIFKPMTSSQQPKTLSMIMQQGLSSSSPEAPEPFTFSNTKPLSHFVSEPSPQKMASMSTHSRQSSLLHYLPQATPAHAPSATASSTATATLQLQHHHQQHHHQQHHHQQQHHQQQHHQQHHHQQQQHQQQQHQQQQQQQPDQSSFLLQQIMQQPQRFQRMMASDSMPALPGQGCCHRCAWTSTALWLEHQHQQWNSLTSTHGHVPPSNLTHVDKACKLGEARPPHVSLGRQPPSRQALGSESFLPGSSFAHELARVTSTSSYNTSEAAPWGGWDPKAWRQVPAPLLPSCDAAAREAEIRSYGNDP", "length": 803 }, "evidence": [ { "id": "A0A287BA19", "url": "https://omabrowser.org/oma/group/A0A287BA19/", "database": "OMA" } ], 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"url": "https://www.ncbi.nlm.nih.gov/protein/NP_001171999" } ] } ], "function": [ { "annotation": "Plays a role in RAN-dependent nucleocytoplasmic transport. Alleviates the TNPO1-dependent inhibition of RAN GTPase activity and mediates the dissociation of RAN from proteins involved in transport into the nucleus. Induces a conformation change in the complex formed by XPO1 and RAN that triggers the release of the nuclear export signal of cargo proteins. Promotes the disassembly of the complex formed by RAN and importin beta. Promotes dissociation of RAN from a complex with KPNA2 and CSE1L. Required for normal mitotic spindle assembly and normal progress through mitosis via its effect on RAN. Does not increase the RAN GTPase activity by itself, but increases GTP hydrolysis mediated by RANGAP1. 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"database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045255", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045255", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045256", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045256", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100151896", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100151896", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NFKDSFM", "url": "https://omabrowser.org/oma/group/NFKDSFM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287BA60", "url": "https://www.orthodb.org/?gene=A0A287BA60", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23138", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23138", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23138:SF182", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23138:SF182", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00638", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00638", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001171999", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001171999", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287BA60", "url": "https://www.uniprot.org/uniprotkb/A0A287BA60", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BA60-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BA60-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QF65", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QF65", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QF65-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QF65-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0SV67", "url": "https://www.uniprot.org/uniprotkb/A0A8D0SV67", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0SV67-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0SV67-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0SVT2", "url": "https://www.uniprot.org/uniprotkb/A0A8D0SVT2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0SVT2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0SVT2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAAKDTHEDHDTSTENADESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGTIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKQELLAIRFLNAENAQKFKTKFEECRKEIEEREKKGSGKNDSAEKVAEKLEALSVKAGTEPQDEAKQPAEEEQ", "length": 206, "header": "tr|A0A287BA60-1|A0A287BA60_PIG Isoform 1 of Ran-specific GTPase-activating protein OS=Sus scrofa OX=9823 GN=RANBP1 PE=1 SV=2 CANONICAL=A0A287BA60-1" }, "isoforms": [ { "isoform_ac": "A0A287BA60-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BA60/entry", "sequence": { "sequence": "MAAAKDTHEDHDTSTENADESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGTIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKQELLAIRFLNAENAQKFKTKFEECRKEIEEREKKGSGKNDSAEKVAEKLEALSVKAGTEPQDEAKQPAEEEQ", "length": 206, "header": "tr|A0A287BA60-1|A0A287BA60_PIG Isoform 1 of Ran-specific GTPase-activating protein OS=Sus scrofa OX=9823 GN=RANBP1 PE=1 SV=2 CANONICAL=A0A287BA60-1" }, "locus": { "chromosome": "14", "start_pos": 51500122, "end_pos": 51494521, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055301.3", "url": "https://www.ensembl.org/id/ENSSSCT00000055301.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053391.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053391.2" } ] } }, { "isoform_ac": "A0A5G2QF65-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QF65/entry", "sequence": { "sequence": "LPPLQDTHEDHDTSTENADESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGTIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKQELLAIRFLNAENAQKFKTKFEECRKEIEEREKKGAGC", "length": 172, "header": "tr|A0A5G2QF65-1|A0A287BA60_PIG Computationally mapped isoform of Ran-specific GTPase-activating protein OS=Sus scrofa OX=9823 GN=RANBP1 PE=1 SV=1 CANONICAL=A0A287BA60-1" }, "locus": { "chromosome": "14", "start_pos": 51499539, "end_pos": 51495502, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070359.2", "url": "https://www.ensembl.org/id/ENSSSCT00000070359.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063362.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063362.1" } ] } }, { "isoform_ac": "A0A8D0SV67-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0SV67/entry", "sequence": { "sequence": "LPPLQDTHEDHDTSTENADESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGTIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKQELLAIRFLNAENAQKFKTKFEECRKEIEEREKKGSGKNDSAEKVAEKLEALSVKAGTEPQDEAKQPAEEEQ", "length": 206, "header": "tr|A0A8D0SV67-1|A0A287BA60_PIG Computationally mapped isoform of Ran-specific GTPase-activating protein OS=Sus scrofa OX=9823 GN=RANBP1 PE=1 SV=1 CANONICAL=A0A287BA60-1" }, "locus": { "chromosome": "14", "start_pos": 51500122, "end_pos": 51495502, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011098.3", "url": "https://www.ensembl.org/id/ENSSSCT00000011098.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000010810.2", "url": "https://www.ensembl.org/id/ENSSSCP00000010810.2" } ] } }, { "isoform_ac": "A0A8D0SVT2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0SVT2/entry", "sequence": { "sequence": "MDHQATCSDTHEDHDTSTENADESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGTIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKQELLAIRFLNAENAQKFKTKFEECRKEIEEREKKGAGC", "length": 175, "header": "tr|A0A8D0SVT2-1|A0A287BA60_PIG Computationally mapped isoform of Ran-specific GTPase-activating protein OS=Sus scrofa OX=9823 GN=RANBP1 PE=1 SV=1 CANONICAL=A0A287BA60-1" }, "locus": { "chromosome": "14", "start_pos": 51499539, "end_pos": 51494951, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058246.3", "url": "https://www.ensembl.org/id/ENSSSCT00000058246.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031509.1", "url": "https://www.ensembl.org/id/ENSSSCP00000031509.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QF65", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QF65" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100151896", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100151896", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D4A2G9-1", "protein_name": "Ran-specific GTPase-activating protein", "gene_name": "Ranbp1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MMPTVDQIHQPAASLLTLSTQDSHEDHDTSTENAEESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGTIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKGPGKNDNAEKVAEKLEALSVREARDEAEEKSEEKQ", "length": 219 }, "evidence": [ { "id": "A0A287BA60", "url": "https://omabrowser.org/oma/group/A0A287BA60/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P34022-1", "protein_name": "Ran-specific GTPase-activating protein", "gene_name": "Ranbp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAKDSHEDHDTSTENADESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGTIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKGPGKNDNAEKVAEKLEALSVREAREEAEEKSEEKQ", "length": 203 }, "evidence": [ { "id": "A0A287BA60", "url": "https://omabrowser.org/oma/group/A0A287BA60/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P41920-1", "protein_name": "Ran-specific GTPase-activating protein 1", "gene_name": "YRB1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSSEDKKPVVDKKEEAAPKPPSSAVFSMFGGKKAEKPETKKDEEDTKEETKKEGDDAPESPDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQEINKKA", "length": 201 }, "evidence": [ { "id": "A0A287BA60", "url": "https://omabrowser.org/oma/group/A0A287BA60/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P43487-1", "protein_name": "Ran-specific GTPase-activating protein", "gene_name": "RANBP1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"length": 1875, "header": "tr|A0A287BA74-1|A0A287BA74_PIG Isoform 1 of Transmembrane protein 131 OS=Sus scrofa OX=9823 GN=TMEM131 PE=3 SV=1 CANONICAL=A0A287BA74-1" }, "locus": { "chromosome": "3", "start_pos": 56469496, "end_pos": 56277707, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058227.2", "url": "https://www.ensembl.org/id/ENSSSCT00000058227.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052972.1", "url": "https://www.ensembl.org/id/ENSSSCP00000052972.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1656, "start_aa": "Thr", "end_pos": 1656, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1656", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 361, "start_aa": "Thr", "end_pos": 361, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr361", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287BA74", "url": "https://www.uniprot.org/uniprotkb/A0A287BA74" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100511075", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511075", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A287BA74", "url": "https://www.uniprot.org/uniprotkb/A0A287BA74" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "collagen binding", "id": "GO:0005518", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005518", "evidence": [ { "database": "UniProtKB", "id": "A0A287BA74", "url": "https://www.uniprot.org/uniprotkb/A0A287BA74" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "collagen biosynthetic process", "id": "GO:0032964", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032964", "evidence": [ { "database": "UniProtKB", "id": "A0A287BA74", "url": "https://www.uniprot.org/uniprotkb/A0A287BA74" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1010, "end_pos": 1012, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1057, 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"https://omabrowser.org/oma/group/CRNNPFD/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287BAG5", "url": "https://www.orthodb.org/?gene=A0A287BAG5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10663", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10663", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10663:SF344", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10663:SF344", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF09324", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09324", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16213", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16213", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF20252", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF20252", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020943095", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020943095", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287BAG5", "url": "https://www.uniprot.org/uniprotkb/A0A287BAG5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BAG5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BAG5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QY49", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QY49", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QY49-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QY49-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RCG6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RCG6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RCG6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RCG6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RED7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RED7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RED7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RED7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FP07", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FP07", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FP07-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FP07-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LLV2", "url": "https://www.uniprot.org/uniprotkb/I3LLV2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LLV2-1", "url": "https://www.uniprot.org/uniprotkb/I3LLV2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEEILRKLQKEASGSKYKAIKESCTWALETLDGVDTIVKIPPHLLREKCLLPLQLALESKNVKLAQHALAGIQKLLAEERFVSMETDSDEKQLLNQILNAVKVTPSLHEDLQVEVMKVLLCITYTPTFDLNGSAVLKIAEVCIETYICSCHQRSINTAVRATLSQMLSDLTLQLRQRQENTIIENPDIPQEFRSQGSTVESLCDDLVSVLTVLCEKLQASINDSQQLQLLYLECVLSVLSSSSAAMQLHRGFTDLIWKNLCPALIVILGNPIHDKTITSAHSSGTSTSVESDSASPGISDHGRGSGCSSTAPALSGPVARTIYYIAAELVRLVGSVDSMKPVLQSLYHRVLLYPPAQHRVEAIKVMKELLGSPQRLCDLAGPSSTEPESRKRSISKRKSHLDLLKLIMDGMTEACIRGGIEACYAAVSCVCTLLGALDELSQGRGLSEGQVQLLLLRLEELKDGAESSRDSMEINEADFRWQRRVLSSEHTPWESGNERSPDISISVTTDTGQTTLEGELGQTTPEDHSENHKNGLKSPAIQESKETLSKVSEPEAVDQPDVVQRSHTVAYPDITNFLSVDCRMRSYGSRYSESNFSVDDQDLSRTEFDSCDQYSMAAEKDSGRSDVSDIGSDNCSLADEEQTPRDCLGHRSLRTAALSLKLLKNQEADQHSARLFVQSLEGLLPRLLALPSVEEVDSALQNFASTFCSGMMHSPAFDGNSSLGLQMLMNADSLYSAAHYALLLNLKLSHGDYYRKRPALAPGTMKEFMKQVQTSGVLMVFSQTWIEELYNQVLDRNMLGEAGYWGSPEDNSLPLITMLTDIDGLESSAIGGQLMASASTESPFTQSRRIDDSTVAGVAFARYILVGCWKNLIDTLSTPLTGRMAGSSKGLAFILGAEGIKEQNQKERDAICMSLDGLRKAARLSCALGVAANCASALAQMAAASCVQEEKEEKEIQEPGDAIAQVKLKVEQKLEQIGKLQGVWLHTAHVLCMDAILSVGLEMGSHNPDCWPHVFRVCEYVGTLEHTHFSDGTSQPPLAISQPQKTPRGGLIRDPESEGSPPEQSLEPESSLSAAPIIQPLSIQELVREGSRGRASDFRGGGLMTGSSAAKVVLTLSTQADRLFEDATDKLNLTALGGFLYQLKKASQSQLFRSVTETVDYSLAMPGEVKSTQDRKSALHLFRLGDAMLRIVRSKSRPLLHVMRCWSLVAPHLVEAACHKERHVSQKAVSFIHDILTEVLTDWNEPPHFHFNEALFRPFERIMQLELCDEDVQDQVVTSIGELVEVCSIQIQSGWRPLFSALETVHSGNKSEVKEYLVGDYSMGKGQAPVFDVFEAFLNTDNIQVFANAATSYIMCLMKFVKGLGEVDCKEIGDCVPGPGATSPDLCLPALDYLRRCSQLLAKIYKMPLKPIFLSGRLASLPRRLQEQSASSEDGMESVLSDFDDDTGLIEVWIILLEQLTAAVSNCPRQHQPPTLDLLFELLRDVTKTPGPGFGIYAVVHLLLPVMSLWLRRSHKDHSYWDVASANFKHAIGLSCELVVEHIQSFIHSDIRYEGMINTMLKELFELLVACVAKPTETISRVGCSCIRYVLVTAGPVFTEEMWRLACCALQDAFSATLKPVKDLLGCFHSGTESFSGEGCQVRVAAPSSSPSAEAEYWRIRAMAQQVFMLDTQCSPKTPNNFDHAQSCQLIIELPPDEKPNGHTKKSVSFREIVVSLLSHQVLLQNLYDILLEEFVKGPSPGEEKMQVPEPKLAGFLRYISMQNLAVIFDLLLDSYRTAREFDTSPGLKCLLKKVSGIGGAANLYRQSAMSFNIYFHALVCAVLSNQETITAEQVKKVLFEDDERSTDSSQQCSSEDEDIFEETAQVSPPRGKEKRQWRARLPSLSVQPISNADWVWLVKRLHKLCMELCNNYIQMHLDLENSMEEAPIFKSDPFFILPSFQSESSTPSTGGFSGKDTPSEDDRSQNRDHAGEPLSLRGPSGEMLLLPPSPKVEKKDHSRKKEWWENAGNKIYTMAADKTISKLMTEYKKRKQQHNLSAFPKEVKVEKKGEPLGPRGQGSPLLQRPQHLMDQGQMRHSFSAGPELLRQEKRPRSGSTGSSRSVSARDAEAQIQAWTNMVLTVLNQIQILPDQTFTALQPAVFPCISQLTCHVTDIRVRQAVREWLGRVGRVYDIIV", "length": 2176, "header": "tr|A0A287BAG5-1|A0A287BAG5_PIG Isoform 1 of ARFGEF family member 3 OS=Sus scrofa OX=9823 GN=ARFGEF3 PE=1 SV=1 CANONICAL=A0A287BAG5-1" }, "isoforms": [ { "isoform_ac": "A0A287BAG5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BAG5/entry", "sequence": { "sequence": "MEEILRKLQKEASGSKYKAIKESCTWALETLDGVDTIVKIPPHLLREKCLLPLQLALESKNVKLAQHALAGIQKLLAEERFVSMETDSDEKQLLNQILNAVKVTPSLHEDLQVEVMKVLLCITYTPTFDLNGSAVLKIAEVCIETYICSCHQRSINTAVRATLSQMLSDLTLQLRQRQENTIIENPDIPQEFRSQGSTVESLCDDLVSVLTVLCEKLQASINDSQQLQLLYLECVLSVLSSSSAAMQLHRGFTDLIWKNLCPALIVILGNPIHDKTITSAHSSGTSTSVESDSASPGISDHGRGSGCSSTAPALSGPVARTIYYIAAELVRLVGSVDSMKPVLQSLYHRVLLYPPAQHRVEAIKVMKELLGSPQRLCDLAGPSSTEPESRKRSISKRKSHLDLLKLIMDGMTEACIRGGIEACYAAVSCVCTLLGALDELSQGRGLSEGQVQLLLLRLEELKDGAESSRDSMEINEADFRWQRRVLSSEHTPWESGNERSPDISISVTTDTGQTTLEGELGQTTPEDHSENHKNGLKSPAIQESKETLSKVSEPEAVDQPDVVQRSHTVAYPDITNFLSVDCRMRSYGSRYSESNFSVDDQDLSRTEFDSCDQYSMAAEKDSGRSDVSDIGSDNCSLADEEQTPRDCLGHRSLRTAALSLKLLKNQEADQHSARLFVQSLEGLLPRLLALPSVEEVDSALQNFASTFCSGMMHSPAFDGNSSLGLQMLMNADSLYSAAHYALLLNLKLSHGDYYRKRPALAPGTMKEFMKQVQTSGVLMVFSQTWIEELYNQVLDRNMLGEAGYWGSPEDNSLPLITMLTDIDGLESSAIGGQLMASASTESPFTQSRRIDDSTVAGVAFARYILVGCWKNLIDTLSTPLTGRMAGSSKGLAFILGAEGIKEQNQKERDAICMSLDGLRKAARLSCALGVAANCASALAQMAAASCVQEEKEEKEIQEPGDAIAQVKLKVEQKLEQIGKLQGVWLHTAHVLCMDAILSVGLEMGSHNPDCWPHVFRVCEYVGTLEHTHFSDGTSQPPLAISQPQKTPRGGLIRDPESEGSPPEQSLEPESSLSAAPIIQPLSIQELVREGSRGRASDFRGGGLMTGSSAAKVVLTLSTQADRLFEDATDKLNLTALGGFLYQLKKASQSQLFRSVTETVDYSLAMPGEVKSTQDRKSALHLFRLGDAMLRIVRSKSRPLLHVMRCWSLVAPHLVEAACHKERHVSQKAVSFIHDILTEVLTDWNEPPHFHFNEALFRPFERIMQLELCDEDVQDQVVTSIGELVEVCSIQIQSGWRPLFSALETVHSGNKSEVKEYLVGDYSMGKGQAPVFDVFEAFLNTDNIQVFANAATSYIMCLMKFVKGLGEVDCKEIGDCVPGPGATSPDLCLPALDYLRRCSQLLAKIYKMPLKPIFLSGRLASLPRRLQEQSASSEDGMESVLSDFDDDTGLIEVWIILLEQLTAAVSNCPRQHQPPTLDLLFELLRDVTKTPGPGFGIYAVVHLLLPVMSLWLRRSHKDHSYWDVASANFKHAIGLSCELVVEHIQSFIHSDIRYEGMINTMLKELFELLVACVAKPTETISRVGCSCIRYVLVTAGPVFTEEMWRLACCALQDAFSATLKPVKDLLGCFHSGTESFSGEGCQVRVAAPSSSPSAEAEYWRIRAMAQQVFMLDTQCSPKTPNNFDHAQSCQLIIELPPDEKPNGHTKKSVSFREIVVSLLSHQVLLQNLYDILLEEFVKGPSPGEEKMQVPEPKLAGFLRYISMQNLAVIFDLLLDSYRTAREFDTSPGLKCLLKKVSGIGGAANLYRQSAMSFNIYFHALVCAVLSNQETITAEQVKKVLFEDDERSTDSSQQCSSEDEDIFEETAQVSPPRGKEKRQWRARLPSLSVQPISNADWVWLVKRLHKLCMELCNNYIQMHLDLENSMEEAPIFKSDPFFILPSFQSESSTPSTGGFSGKDTPSEDDRSQNRDHAGEPLSLRGPSGEMLLLPPSPKVEKKDHSRKKEWWENAGNKIYTMAADKTISKLMTEYKKRKQQHNLSAFPKEVKVEKKGEPLGPRGQGSPLLQRPQHLMDQGQMRHSFSAGPELLRQEKRPRSGSTGSSRSVSARDAEAQIQAWTNMVLTVLNQIQILPDQTFTALQPAVFPCISQLTCHVTDIRVRQAVREWLGRVGRVYDIIV", "length": 2176, "header": "tr|A0A287BAG5-1|A0A287BAG5_PIG Isoform 1 of ARFGEF family member 3 OS=Sus scrofa OX=9823 GN=ARFGEF3 PE=1 SV=1 CANONICAL=A0A287BAG5-1" }, "locus": { "chromosome": "1", "start_pos": 26255298, "end_pos": 26077099, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045479.3", "url": "https://www.ensembl.org/id/ENSSSCT00000045479.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053057.1", "url": "https://www.ensembl.org/id/ENSSSCP00000053057.1" } ] } }, { "isoform_ac": "A0A5G2QY49-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QY49/entry", "sequence": { "sequence": "MEEILRKLQKEASGSKYKAIKESCTWALETLDGVDTIVKIPPHLLREKCLLPLQLALESKNVKLAQHALAGIQKLLAEERFVSMETDSDEKQLLNQILNAVKVTPSLHEDLQVEVMKIIENPDIPQEFRSQGSTVESLCDDLVSVLTVLCEKLQASINDSQQLQLLYLECVLSVLSSSSAAMQLHRGFTDLIWKNLCPALIVILGNPIHDKTITSAHSSGTSTSVESDSASPGISDHGRGSGCSSTAPALSGPVARTIYYIAAELVRLVGSVDSMKPVLQSLYHRVLLYPPAQHRVEAIKVMKELLGSPQRLCDLAGPSSTEPESRKRSISKRKSHLDLLKLIMDGMTEACIRGGIEACYAAVSCVCTLLGALDELSQGRGLSEGQVQLLLLRLEELKDGAESSRDSMEINEADFRWQRRVLSSEHTPWESGNERSPDISISVTTDTGQTTLEGELGQTTPEDHSENHKNGLKSPAIQESKETLSKVSEPEAVDQPDVVQRSHTVAYPDITNFLSVDCRMRSYGSRYSESNFSVDDQDLSRTEFDSCDQYSMAAEKDSGRSDVSDIGSDNCSLADEEQTPRDCLGHRSLRTAALSLKLLKNQEADQHSARLFVQSLEGLLPRLLALPSVEEVDSALQNFASTFCSGMMHSPAFDGNSSLGLQMLMNADSLYSAAHYALLLNLKLSHGDYYRKRPALAPGTMKEFMKQVQTSGVLMVFSQTWIEELYNQVLDRNMLGEAGYWGSPEDNSLPLITMLTDIDGLESSAIGGQLMASASTESPFTQSRRIDDSTVAGVAFARYILVGCWKNLIDTLSTPLTGRMAGSSKGLAFILGAEGIKEQNQKERDAICMSLDGLRKAARLSCALGVAANCASALAQMAAASCVQEEKEEKEIQEPGDAIAQVKLKVEQKLEQIGKLQGVWLHTAHVLCMDAILSVGLEMGSHNPDCWPHVFRVCEYVGTLEHTHFSDGTSQPPLAISQPQKTPRGGLIRDPESEGSPPEQSLEPESSLSAAPIIQPLSIQELVREGSRGRASDFRGGGLMTGSSAAKVVLTLSTQADRLFEDATDKLNLTALGGFLYQLKKASQSQLFRSVTETVDYSLAMPGEVKSTQDRKSALHLFRLGDAMLRIVRSKSRPLLHVMRCWSLVAPHLVEAACHKERHVSQKAVSFIHDILTEVLTDWNEPPHFHFNEALFRPFERIMQLELCDEDVQDQVVTSIGELVEVCSIQIQSGWRPLFSALETVHSGNKSEVKEYLVGDYSMGKGQAPVFDVFEAFLNTDNIQVFANAATSYIMCLMKFVKGLGEVDCKEIGDCVPGPGATSPDLCLPALDYLRRCSQLLAKIYKMPLKPIFLSGRLASLPRRLQEQSASSEDGMESVLSDFDDDTGLIEVWIILLEQLTAAVSNCPRQHQPPTLDLLFELLRDVTKTPGPGFGIYAVVHLLLPVMSLWLRRSHKDHSYWDVASANFKHAIGLSCELVVEHIQSFIHSDIRYEGMINTMLKELFELLVACVAKPTETISRVGCSCIRYVLVTAGPVFTEEMWRLACCALQDAFSATLKPVKDLLGCFHSGTESFSGEGCQVRVAAPSSSPSAEAEYWRIRAMAQQVFMLDTQCSPKTPNNFDHAQSCQLIIELPPDEKPNGHTKKSVSFREIVVSLLSHQVLLQNLYDILLEEFVKGPSPGEEKMQVPEPKLAGFLRYISMQNLAVIFDLLLDSYRTAREFDTSPGLKCLLKKVSGIGGAANLYRQSAMSFNIYFHALVCAVLSNQETITAEQVKKVLFEDDERSTDSSQQCSSEDEDIFEETAQVSPPRGKEKRQWRARLPSLSVQPISNADWVWLVKRLHKLCMELCNNYIQMHLDLENSMEEAPIFKSDPFFILPSFQSESSTPSTGGFSGKDTPSEDDRSQNRDHAGEPLSLRGPSGEMLLLPPSPKVEKKDHSRKKEWWENAGNKIYTMAADKTISKLMTEYKKRKQQHNLSAFPKEVKVEKKGEPLGPRGQGSPLLQRPQHLMDQGQMRHSFSAGPELLRQEKRPRSGSTGSSRSVSARDAEAQIQAWTNMVLTVLNQIQILPDQTFTALQPAVFPCISQLTCHVTDIRVRQAVREWLGRVGRVYDIIV", "length": 2112, "header": "tr|A0A5G2QY49-1|A0A287BAG5_PIG Computationally mapped isoform of ARFGEF family member 3 OS=Sus scrofa OX=9823 GN=ARFGEF3 PE=1 SV=1 CANONICAL=A0A287BAG5-1" }, "locus": { "chromosome": "1", "start_pos": 26255298, "end_pos": 26077099, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077365.1", "url": "https://www.ensembl.org/id/ENSSSCT00000077365.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069068.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069068.1" } ] } }, { "isoform_ac": "A0A5G2RCG6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RCG6/entry", "sequence": { "sequence": "MEEILRKLQKEASGSKYKAIKESCTWALETLDGVDTIVKIPPHLLSSHKCLLPLQLALESKNVKLAQHALAGIQKLLAEERFVSMETDSDEKQLLNQILNAVKVTPSLHEDLQVEVMKVLLCITYTPTFDLNGSAVLKIAEVCIETYICSCHQRSINTAVRATLSQMLSDLTLQLRQRQENTVSLPVPIHSSWSWSTVESLCDDLVSVLTVLCEKLQASINDSQQLQLLYLECVLSVLSSSSAAMQLHRGFTDLIWKNLCPALIVILGNPIHDKTITSAHSSGTSTSVESDSASPGISDHGRGSGCSSTAPALSGPVARTIYYIAAELVRLVGSVDSMKPVLQSLYHRVLLYPPAQHRVEAIKVMKELLGSPQRLCDLAGPSSTEPESRKRSISKRKSHLDLLKLIMDGMTEACIRGGIEACYAAVSCVCTLLGALDELSQGRGLSEGQVQLLLLRLEELKDGAESSRDSMEINEADFRWQRRVLSSEHTPWESGNERSPDISISVTTDTGQTTLEGELGQTTPEDHSENHKNGLKSPAIQESKETLSKVSEPEAVDQPDVVQRSHTVAYPDITNFLSVDCRMRSYGSRYSESNFSVDDQDLSRTEFDSCDQYSMAAEKDSGRSDVSDIGSDNCSLADEEQTPRDCLGHRSLRTAALSLKLLKNQEADQHSARLFVQSLEGLLPRLLALPSVEEVDSALQNFASTFCSGMMHSPAFDGNSSLGLQMLMNADSLYSAAHYALLLNLKLSHGDYYRKRPALAPGTMKEFMKQVQTSGVLMVFSQTWIEELYNQVLDRNMLGEAGYWGSPEDNSLPLITMLTDIDGLESSAIGGQLMASASTESPFTQSRRIDDSTVAGVAFARYILVGCWKNLIDTLSTPLTGRMAGSSKGLAFILGAEGIKEQNQKERDAICMSLDGLRKAARLSCALGVAANCASALAQMAAASCVQEEKEEKEIQEPGDAIAQVKLKVEQKLEQIGKLQGVWLHTAHVLCMDAILSVGLEMGSHNPDCWPHVFRVCEYVGTLEHTHFSDGTSQPPLAISQPQKTPRGGLIRDPESEGSPPEQSLEPESSLSAAPIIQPLSIQELVREGSRGRASDFRGGGLMTGSSAAKVVLTLSTQADRLFEDATDKLNLTALGGFLYQLKKASQSQLFRSVTETVDYSLAMPGEVKSTQDRKSALHLFRLGDAMLRIVRSKSRPLLHVMRCWSLVAPHLVEAACHKERHVSQKAVSFIHDILTEVLTDWNEPPHFHFNEALFRPFERIMQLELCDEDVQDQVVTSIGELVEVCSIQIQSGWRPLFSALETVHSGNKSEVKEYLVGDYSMGKGQAPVFDVFEAFLNTDNIQVFANAATSYIMCLMKFVKGLGEVDCKEIGDCVPGPGATSPDLCLPALDYLRRCSQLLAKIYKMPLKPIFLSGRLASLPRRLQEQSASSEDGMESVLSDFDDDTGLIEVWIILLEQLTAAVSNCPRQHQPPTLDLLFELLRDVTKTPGPGFGIYAVVHLLLPVMSLWLRRSHKDHSYWDVASANFKHAIGLSCELVVEHIQSFIHSDIRYEGMINTMLKELFELLVACVAKPTETISRVGCSCIRYVLVTAGPVFTEEMWRLACCALQDAFSATLKPVKDLLGCFHSGTESFSGEGCQVRVAAPSSSPSAEAEYWRIRAMAQQVFMLDTQCSPKTPNNFDHAQSCQLIIELPPDEKPNGHTKKSVSFREIVVSLLSHQVLLQNLYDILLEEFVKGPSPGEEKMQVPEPKLAGFLRYISMQNLAVIFDLLLDSYRTAREFDTSPGLKCLLKKVSGIGGAANLYRQSAMSFNIYFHALVCAVLSNQETITAEQVKKVLFEDDERSTDSSQQCSSEDEDIFEETAQVSPPRGKEKRQWRARLPSLSVQPISNADWVWLVKRLHKLCMELCNNYIQMHLDLENSMEEAPIFKSDPFFILPSFQSESSTPSTGGFSGKDTPSEDDRSQNRDHAGEPLSLRGPSGEMLLLPPSPKVEKKDHSRKKEWWENAGNKIYTMAADKTISKLMTEYKKRKQQHNLSAFPKEVKVEKKGEPLGPRGQGSPLLQRPQHLMDQGQMRHSFSAGPELLRQEKRPRSGSTGSSRSVSARDAEAQIQAWTNMVLTVLNQIQILPDQTFTALQPAVFPCISQLTCHVTDIRVRQAVREWLGRVGRVYDIIV", "length": 2175, "header": "tr|A0A5G2RCG6-1|A0A287BAG5_PIG Computationally mapped isoform of ARFGEF family member 3 OS=Sus scrofa OX=9823 GN=ARFGEF3 PE=1 SV=1 CANONICAL=A0A287BAG5-1" }, "locus": { "chromosome": "1", "start_pos": 26255298, "end_pos": 26077099, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074802.2", "url": "https://www.ensembl.org/id/ENSSSCT00000074802.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071942.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071942.1" } ] } }, { "isoform_ac": "A0A5G2RED7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RED7/entry", "sequence": { "sequence": "MEEILRKLQKEASGSKYKAIKESCTWALETLDGVDTIVKIPPHLLSSHKCLLPLQLALESKNVKLAQHALAGIQKLLAEERFVSMETDSDEKQLLNQILNAVKVTPSLHEDLQVEVMKVLLCITYTPTFDLNGSAVLKIAEVSARFSQPQVRASRSTVESLCDDLVSVLTVLCEKLQASINDSQQLQLLYLECVLSVLSSSSAAMQLHRGFTDLIWKNLCPALIVILGNPIHDKTITSAHSSGTSTSVESDSASPGISDHGRGSGCSSTAPALSGPVARTIYYIAAELVRLVGSVDSMKPVLQSLYHRVLLYPPAQHRVEAIKVMKELLGSPQRLCDLAGPSSTEPESRKRSISKRKSHLDLLKLIMDGMTEACIRGGIEACYAAVSCVCTLLGALDELSQGRGLSEGQVQLLLLRLEELKDGAESSRDSMEINEADFRWQRRVLSSEHTPWESGNERSPDISISVTTDTGQTTLEGELGQTTPEDHSENHKNGLKSPAIQESKETLSKVSEPEAVDQPDVVQRSHTVAYPDITNFLSVDCRMRSYGSRYSESNFSVDDQDLSRTEFDSCDQYSMAAEKDSGRSDVSDIGSDNCSLADEEQTPRDCLGHRSLRTAALSLKLLKNQEADQHSARLFVQSLEGLLPRLLALPSVEEVDSALQNFASTFCSGMMHSPAFDGNSSLGLQMLMNADSLYSAAHYALLLNLKLSHGDYYRKRPALAPGTMKEFMKQVQTSGVLMVFSQTWIEELYNQVLDRNMLGEAGYWGSPEDNSLPLITMLTDIDGLESSAIGGQLMASASTESPFTQSRRIDDSTVAGVAFARYILVGCWKNLIDTLSTPLTGRMAGSSKGLAFILGAEGIKEQNQKERDAICMSLDGLRKAARLSCALGVAANCASALAQMAAASCVQEEKEEKEIQEPGDAIAQVKLKVEQKLEQIGKLQGVWLHTAHVLCMDAILSVGLEMGSHNPDCWPHVFRVCEYVGTLEHTHFSDGTSQPPLAISQPQKTPRGGLIRDPESEGSPPEQSLEPESSLSAAPIIQPLSIQELVREGSRGRASDFRGGGLMTGSSAAKVVLTLSTQADRLFEDATDKLNLTALGGFLYQLKKASQSQLFRSVTETVDYSLAMPGEVKSTQDRKSALHLFRLGDAMLRIVRSKSRPLLHVMRCWSLVAPHLVEAACHKERHVSQKAVSFIHDILTEVLTDWNEPPHFHFNEALFRPFERIMQLELCDEDVQDQVVTSIGELVEVCSIQIQSGWRPLFSALETVHSGNKSEVKEYLVGDYSMGKGQAPVFDVFEAFLNTDNIQVFANAATSYIMCLMKFVKGLGEVDCKEIGDCVPGPGATSPDLCLPALDYLRRCSQLLAKIYKMPLKPIFLSGRLASLPRRLQEQSASSEDGMESVLSDFDDDTGLIEVWIILLEQLTAAVSNCPRQHQPPTLDLLFELLRDVTKTPGPGFGIYAVVHLLLPVMSLWLRRSHKDHSYWDVASANFKHAIGLSCELVVEHIQSFIHSDIRYEGMINTMLKELFELLVACVAKPTETISRVGCSCIRYVLVTAGPVFTEEMWRLACCALQDAFSATLKPVKDLLGCFHSGTESFSGEGCQVRVAAPSSSPSAEAEYWRIRAMAQQVFMLDTQCSPKTPNNFDHAQSCQLIIELPPDEKPNGHTKKSVSFREIVVSLLSHQVLLQNLYDILLEEFVKGPSPGEEKMQVPEPKLAGFLRYISMQNLAVIFDLLLDSYRTAREFDTSPGLKCLLKKVSGIGGAANLYRQSAMSFNIYFHALVCAVLSNQETITAEQVKKVLFEDDERSTDSSQQCSSEDEDIFEETAQVSPPRGKEKRQWRARLPSLSVQPISNADWVWLVKRLHKLCMELCNNYIQMHLDLENSMEEAPIFKSDPFFILPSFQSESSTPSTGGFSGKDTPSEDDRSQNRDHAGEPLSLRGPSGEMLLLPPSPKVEKKDHSRKKEWWENAGNKIYTMAADKTISKLMTEYKKRKQQHNLSAFPKEVKVEKKGEPLGPRGQGSPLLQRPQHLMDQGQMRHSFSAGPELLRQEKRPRSGSTGSSRSVSARDAEAQIQAWTNMVLTVLNQIQILPDQTFTALQPAVFPCISQLTCHVTDIRVRQAVREWLGRVGRVYDIIV", "length": 2135, "header": "tr|A0A5G2RED7-1|A0A287BAG5_PIG Computationally mapped isoform of ARFGEF family member 3 OS=Sus scrofa OX=9823 GN=ARFGEF3 PE=1 SV=1 CANONICAL=A0A287BAG5-1" }, "locus": { "chromosome": "1", "start_pos": 26255298, "end_pos": 26077099, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067431.2", "url": "https://www.ensembl.org/id/ENSSSCT00000067431.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072976.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072976.1" } ] } }, { "isoform_ac": "A0A8W4FP07-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FP07/entry", "sequence": { "sequence": "MEEILRKLQKEASGSKYKAIKESCTWALETLDGVDTIVKIPPHLLSSHKCLLPLQLALESKNVKLAQHALAGIQKLLAEERFVSMETDSDEKQLLNQILNAVKVTPSLHEDLQVEVMKVGSTVESLCDDLVSVLTVLCEKLQASINDSQQLQLLYLECVLSVLSSSSAAMQLHRGFTDLIWKNLCPALIVILGNPIHDKTITSAHSSGTSTSVESDSASPGISDHGRGSGCSSTAPALSGPVARTIYYIAAELVRLVGSVDSMKPVLQSLYHRVLLYPPAQHRVEAIKVMKELLGSPQRLCDLAGPSSTEPESRKRSISKRKSHLDLLKLIMDGMTEACIRGGIEACYAAVSCVCTLLGALDELSQGRGLSEGQVQLLLLRLEELKDGAESSRDSMEINEADFRWQRRVLSSEHTPWESGNERSPDISISVTTDTGQTTLEGELGQTTPEDHSENHKNGLKSPAIQESKETLSKVSEPEAVDQPDVVQRSHTVAYPDITNFLSVDCRMRSYGSRYSESNFSVDDQDLSRTEFDSCDQYSMAAEKDSGRSDVSDIGSDNCSLADEEQTPRDCLGHRSLRTAALSLKLLKNQEADQHSARLFVQSLEGLLPRLLALPSVEEVDSALQNFASTFCSGMMHSPAFDGNSSLGLQMLMNADSLYSAAHYALLLNLKLSHGDYYRKRPALAPGTMKEFMKQVQTSGVLMVFSQTWIEELYNQVLDRNMLGEAGYWGSPEDNSLPLITMLTDIDGLESSAIGGQLMASASTESPFTQSRRIDDSTVAGVAFARYILVGCWKNLIDTLSTPLTGRMAGSSKGLAFILGAEGIKEQNQKERDAICMSLDGLRKAARLSCALGVAANCASALAQMAAASCVQEEKEEKEIQEPGDAIAQVKLKVEQKLEQIGKLQGVWLHTAHVLCMDAILSVGLEMGSHNPDCWPHVFRVCEYVGTLEHTHFSDGTSQPPLAISQPQKTPRGGLIRDPESEGSPPEQSLEPESSLSAAPIIQPLSIQELVREGSRGRASDFRGGGLMTGSSAAKVVLTLSTQADRLFEDATDKLNLTALGGFLYQLKKASQSQLFRSVTETVDYSLAMPGEVKSTQDRKSALHLFRLGDAMLRIVRSKSRPLLHVMRCWSLVAPHLVEAACHKERHVSQKAVSFIHDILTEVLTDWNEPPHFHFNEALFRPFERIMQLELCDEDVQDQVVTSIGELVEVCSIQIQSGWRPLFSALETVHSGNKSEVKEYLVGDYSMGKGQAPVFDVFEAFLNTDNIQVFANAATSYIMCLMKFVKGLGEVDCKEIGDCVPGPGATSPDLCLPALDYLRRCSQLLAKIYKMPLKPIFLSGRLASLPRRLQEQSASSEDGMESVLSDFDDDTGLIEVWIILLEQLTAAVSNCPRQHQPPTLDLLFELLRDVTKTPGPGFGIYAVVHLLLPVMSLWLRRSHKDHSYWDVASANFKHAIGLSCELVVEHIQSFIHSDIRYEGMINTMLKELFELLVACVAKPTETISRVGCSCIRYVLVTAGPVFTEEMWRLACCALQDAFSATLKPVKDLLGCFHSGTESFSGEGCQVRVAAPSSSPSAEAEYWRIRAMAQQVFMLDTQCSPKTPNNFDHAQSCQLIIELPPDEKPNGHTKKSVSFREIVVSLLSHQVLLQNLYDILLEEFVKGPSPGEEKMQVPEPKLAGFLRYISMQNLAVIFDLLLDSYRTAREFDTSPGLKCLLKKVSGIGGAANLYRQSAMSFNIYFHALVCAVLSNQETITAEQVKKVLFEDDERSTDSSQQCSSEDEDIFEETAQVSPPRGKEKRQWRARLPSLSVQPISNADWVWLVKRLHKLCMELCNNYIQMHLDLENSMEEAPIFKSDPFFILPSFQSESSTPSTGGFSGKDTPSEDDRSQNRDHAGEPLSLRGPSGEMLLLPPSPKVEKKDHSRKKEWWENAGNKIYTMAADKTISKLMTEYKKRKQQHNLSAFPKEVKVEKKGEPLGPRGQGSPLLQRPQHLMDQGQMRHSFSAGPELLRQEKRPRSGSTGSSRSVSARDAEAQIQAWTNMVLTVLNQIQILPDQTFTALQPAVFPCISQLTCHVTDIRVRQAVREWLGRVGRVYDIIV", "length": 2100, "header": "tr|A0A8W4FP07-1|A0A287BAG5_PIG Computationally mapped isoform of ARFGEF family member 3 OS=Sus scrofa OX=9823 GN=ARFGEF3 PE=1 SV=1 CANONICAL=A0A287BAG5-1" }, "locus": { "chromosome": "1", "start_pos": 26255298, "end_pos": 26077099, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000100638.1", "url": "https://www.ensembl.org/id/ENSSSCT00000100638.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080040.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080040.1" } ] } }, { "isoform_ac": "I3LLV2-1", "url": "https://www.uniprot.org/uniprotkb/I3LLV2/entry", "sequence": { "sequence": "MEEILRKLQKEASGSKYKAIKESCTWALETLDGVDTIVKIPPHLLREKCLLPLQLALESKNVKLAQHALAGIQKLLAEERFVSMETDSDEKQLLNQILNAVKVTPSLHEDLQVEVMKVLLCITYTPTFDLNGSAVLKIAEIIENPDIPQEFRSQGSTVESLCDDLVSVLTVLCEKLQASINDSQQLQLLYLECVLSVLSSSSAAMQLHRGFTDLIWKNLCPALIVILGNPIHDKTITSAHSSGTSTSVESDSASPGISDHGRGSGCSSTAPALSGPVARTIYYIAAELVRLVGSVDSMKPVLQSLYHRVLLYPPAQHRVEAIKVMKELLGSPQRLCDLAGPSSTEPESRKRSISKRKSHLDLLKLIMDGMTEACIRGGIEACYAAVSCVCTLLGALDELSQGRGLSEGQVQLLLLRLEELKDGAESSRDSMEINEADFRWQRRVLSSEHTPWESGNERSPDISISVTTDTGQTTLEGELGQTTPEDHSENHKNGLKSPAIQESKETLSKVSEPEAVDQPDVVQRSHTVAYPDITNFLSVDCRMRSYGSRYSESNFSVDDQDLSRTEFDSCDQYSMAAEKDSGRSDVSDIGSDNCSLADEEQTPRDCLGHRSLRTAALSLKLLKNQEADQHSARLFVQSLEGLLPRLLALPSVEEVDSALQNFASTFCSGMMHSPAFDGNSSLGLQMLMNADSLYSAAHYALLLNLKLSHGDYYRKRPALAPGTMKEFMKQVQTSGVLMVFSQTWIEELYNQVLDRNMLGEAGYWGSPEDNSLPLITMLTDIDGLESSAIGGQLMASASTESPFTQSRRIDDSTVAGVAFARYILVGCWKNLIDTLSTPLTGRMAGSSKGLAFILGAEGIKEQNQKERDAICMSLDGLRKAARLSCALGVAANCASALAQMAAASCVQEEKEEKEIQEPGDAIAQVKLKVEQKLEQIGKLQGVWLHTAHVLCMDAILSVGLEMGSHNPDCWPHVFRVCEYVGTLEHTHFSDGTSQPPLAISQPQKTPRGGLIRDPESEGSPPEQSLEPESSLSAAPIIQPLSIQELVREGSRGRASDFRGGGLMTGSSAAKVVLTLSTQADRLFEDATDKLNLTALGGFLYQLKKASQSQLFRSVTETVDYSLAMPGEVKSTQDRKSALHLFRLGDAMLRIVRSKSRPLLHVMRCWSLVAPHLVEAACHKERHVSQKAVSFIHDILTEVLTDWNEPPHFHFNEALFRPFERIMQLELCDEDVQDQVVTSIGELVEVCSIQIQSGWRPLFSALETVHSGNKSEVKEYLVGDYSMGKGQAPVFDVFEAFLNTDNIQVFANAATSYIMCLMKFVKGLGEVDCKEIGDCVPGPGATSPDLCLPALDYLRRCSQLLAKIYKMPLKPIFLSGRLASLPRRLQEQSASSEDGMESVLSDFDDDTGLIEVWIILLEQLTAAVSNCPRQHQPPTLDLLFELLRDVTKTPGPGFGIYAVVHLLLPVMSLWLRRSHKDHSYWDVASANFKHAIGLSCELVVEHIQSFIHSDIRYEGMINTMLKELFELLVACVAKPTETISRVGCSCIRYVLVTAGPVFTEEMWRLACCALQDAFSATLKPVKDLLGCFHSGTESFSGEGCQVRVAAPSSSPSAEAEYWRIRAMAQQVFMLDTQCSPKTPNNFDHAQSCQLIIELPPDEKPNGHTKKSVSFREIVVSLLSHQVLLQNLYDILLEEFVKGPSPGEEKMQVPEPKLAGFLRYISMQNLAVIFDLLLDSYRTAREFDTSPGLKCLLKKVSGIGGAANLYRQSAMSFNIYFHALVCAVLSNQETITAEQVKKVLFEDDERSTDSSQQCSSEDEDIFEETAQVSPPRGKEKRQWRARLPSLSVQPISNADWVWLVKRLHKLCMELCNNYIQMHLDLENSMEEAPIFKSDPFFILPSFQSESSTPSTGGFSGKDTPSEDDRSQNRDHAGEPLSLRGPSGEMLLLPPSPKVEKKDHSRKKEWWENAGNKIYTMAADKTISKLMTEYKKRKQQHNLSAFPKEVKVEKKGEPLGPRGQGSPLLQRPQHLMDQGQMRHSFSAGPELLRQEKRPRSGSTGSSRSVSARDAEAQIQAWTNMVLTVLNQIQILPDQTFTALQPAVFPCISQLTCHVTDIRVRQAVREWLGRVGRVYDIIV", "length": 2135, "header": "tr|I3LLV2-1|A0A287BAG5_PIG Computationally mapped isoform of ARFGEF family member 3 OS=Sus scrofa OX=9823 GN=ARFGEF3 PE=1 SV=2 CANONICAL=A0A287BAG5-1" }, "locus": { "chromosome": "1", "start_pos": 26255298, "end_pos": 26077099, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023062.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023062.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000025072.2", "url": "https://www.ensembl.org/id/ENSSSCP00000025072.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1947, "start_aa": "Thr", "end_pos": 1947, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1947", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QY49", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QY49" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100621590", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621590", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2MKQ1-1", "protein_name": "Brefeldin A-inhibited guanine nucleotide-exchange protein 3", "gene_name": "Arfgef3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEEILRKLQRDASGSKYKAIKESCTWALETLSGLDTIVKIPPHLLREKCLLPLQLALESKNVKLAQHALAGMQKLLSEERFVSMETDSDEKQLLNQILNAVKVTPSLNEDLQVEVMKVLLCITYSPTFDMNGSAVLKIAEVCIETYTCSCHQRSINTAVRATLSQMLGDLTLQLRQRQENTIIENPDAPQEFGSQGSTVEALCDDVVSVLAVLCEKLQASINDSQQLQLLYLECILSVLSSSSSSMYLHRGFTDLIWKSLCPALIVILGNPIHDKTITSAHSSSSTNMESDSASPGVSDHGRGSGCSCTAPTLSGPVARTIYYLAAELVRLVGSVDSMKPVLQSLYHRVLLYPPPQHRVEAIKIMKEILGSPQHLYDLAGPSSTETEPRKRSISKRKSHLDLLKLIMDGMTEACIKGGIEACYAAVSCVCTLLGALDELSQGKGLSESQVQLLLLRLEELRDGAESSRDSMEINEADFRWQRRVLSSEHTPWESGNERSPDISISVTTDTGQTTLEGELGQTTPEDHKNGLKSPAIQEGKETVCKVSEPEAIDQPDVVQRSHTVPYPDITNFLSVDCRTRSYGSRYSESNFSVDDQDLSRTEFDSCDQYSMAAEKDSGRSDVSDIGSDNCSLADEEQTPRDYMGHRSLRTAALSLKLLKNQEADQHSARLFVQSLEGLLPRLLALSSVEEVDTALQNFASTFCSGMMHSPGFDGGSSLSFQMLMNADSLYSAAHCALLLNLKLSHGDYYRKRPTLPPGMMKEFMKQVQTSGVLMVFSQAWIEELYHQVLDRNMLGEAGYWGSPEDNSLPLITMLTDIDGLESSAIGGQLMASASMESPFTQSRRIDDSTVAGVAFARYILVGCWKNLIDTLSTPLTGRMAGSSKGLAFILGAEGIKEQNQKERDAICMSLDGLRKAARLSCALGVAANCASALAQMAAASCVQEEKEEREAQEPSDAIAQVKLKVEQKLEQMGKVQGVWLHTAHVLCMDAILSVGLEMGSHNPDCWPHVFRVCEYVGTLEHTHFSDGASQPPLTIRQPQKTSGSSGLLGDLECEGSSQEQSLEQGPSLSTAPVVQPRSIQELVRECSRGRTSDFRGGSLSGNSAAKVVLSLSTQADRLFDDATDKLNLMALGGFLYQLKKASQSQLFHSVTDTVDYSLTMPGEVKSTQDRKSALHLFRLGDAMLRIVRSKARPLLHVMRCWSLVAPHLVEAACHKERHVSQKAVSFIHDILTEVLTDWSEPPHFHFNEALFRPFERIMQLELCDEDVQDQVVTSIGELVEVCSTQIQSGWRPLFSALETVHSGNKSEVKEYLVGDYSMGKGQAPVFDVFEAFLNTDNIQVFANAATSYIMCLMKFVKGLGEVDCKEIGDCVPGVGATSTDLCLPALDYLRRCSQLLAKIYKMPLKPIFLSGRLASLPRRLQEQSASSEDGIESVLSDFDDETGLIEVWIILLEQLTAAVSNCPRQHQPPTLDLLFELLRDVTKTPGPGFGIYAVVHLLLPVMSVWLRRSHKDHSYWDVASANFKHAIGLSCELVVEHIQSFLHSDIRYESMINTMLKDLFELLVACVAKPTETISRVGCSCIRYVLVTAGPVFTEEMWRLACCALQDAFSATLKPVKDLLGCFHSGTEGFSGEGCQVRVAAPSSSPSAEAEYWRIRAMAQQVFMLDTQGSPKTPNNFDHAQSCQLIIELPPDEKPNGHAKKSVSFREIVVSLLSHQVLLQNLYDVLLEEFVKGPSPGEEKTTVQVPDTKLAGFLRYISMQNLAVIFDLLLDSYRTAREFDTSPGLKCLLKKVSGIGGAANLYRQSAMSFNIYFHALVCAVLTNQETITAEQVKKVLFDEEERSSDSSQQCSSEDEDIFEETAQVSPPRGKEKRQWRARLPSLSVQPVSNADWVWLVKRLHKLCMELCNHYIQMHLDLESSLEEPPTFKSDPFFILPSFQSESSTPSTGGFSGKNTPSEDDRREHLSEPLSLRVGGGDMLMLPPSPKTEKKDPGRKKEWWESAGNKICTMAADKTISKLITEYKKRRQPHNLPAFPKEVKVDKKGEPLGPRGPDSPLLQRPQHLMDQGQMRHSFSAGPELLRQEKRPRSGSTGSSLSVSVRDAEAQIQAWTNMVLTVLNQIQILPDQTFTALQPAVFPCISQLTCHVTDIRVRQAVREWLGRVGRVYDIII", "length": 2170 }, "evidence": [ { "id": "A0A287BAG5", "url": "https://omabrowser.org/oma/group/A0A287BAG5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8I5ZMK5-1", "protein_name": "ARFGEF family member 3", "gene_name": "Arfgef3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEEILRKLQRDASGSKYKAIKESCTWALETLGGLDTVAKIPPHLLREKCLLPLQLALESKNVKLAQHALAGMQKLLSEERFVSMETDSDDKQLLNQILNAVKVTPSLNEDLQVEVMKVLLCITYTPTFDMNGSAVLKIAEVCIETYTCSCHQRSINTAVRATLSQMLGDLTLQLRQRQENTIIENPDAPQGFRSQGLTVEALCDDVVSVLAVLCEKLQASINDSQQLQLLYLECILSILSSSSSSMYLHRGFTDLIWKSLCPALVVILGNPIHDKTITSAHSTSTGTSMESDSASLGVSDHGRGSGCSCTAPTLSGPVARTIYYLATELVRLVGSVDSLKPVLQSLYHRVLLYPPPQHRVEAIKIMREILGSPQRLYDLAGPSSLESEPRKRSISKRKSHLDLLKLIMDGMTEACIKGGIEACYAAVSCVCTLLGALDELSQGKGLNDNQVQQLLLRLEELRDGAESSRDSMEINEADFRWQRKVLSSEHTPWETGNERSPDISISVTTDTGQTTLEGELGQTTPEDHKNGLKSPAIQEGRETMSKVSEPETIDQPDVVQRSHTVPYPDITNFLSVDCRTRSYGSRYSESNFSVDDQDLSRTEFDSCDQYSMAAEKDSGRSDVSDIGSDNCSLADEEQTPRDYMGHRSLRTAALSLKLLKNQEADQHSARLFIQSLEGLLPRLLALSSVEEVDSALQNFASTFCSGMMHSPGFDGGSSLSIQMLMNADSLYTAAHCALLLNLKLSHGDYYRKRPNVAPGMMKEFMKQVQTSGVLMVFSQAWIEELFHQVLDRNMLGEAGYWGSPEDNNLPLITMLTDIDGLESSAIGGQLMASASMESPFTQSRKLDDSTVAGIAFARYILVGCWKNLIDTLSTPLTGRMAGSSKGLAFILGAEGIKEQNQKERDAICMSLDGLRKAARLSCALGVAANCASALAQMAAASCVQEEKEERESQEPSDALAQGMKLKVEQKLEQMGKAQGVWLHTAHVLCMDAILSVGLEMGSHNPDCWPHVFRVCEYVGTLEHTHFSDGLSQPPLTIHQPQKTSGSSGLLGELEFKSSSQEQSLEQGPSLNAAPVVQPHTIQELVRECSRGRTSDFRGGSLSGNSAAKVVLSLSTQADRLFDDATDKLNLTALGGFLYQLKKASQSQLFHSVTDTVDYSLTMPGEVKSTQDQKSALHLYRLGDAMLRIVRSKARPLLHVMRCWSLVAPHLVEAACHKERHVSQKAVSFIHDILTEVLTDWSEPPHFHFNEALFRPFERIMQLELCDEDVQDQVVTSIGELVEVCSAQIQSGWRPLFSALETVHSGNKSEVKEYLVGDYSMGKGQAPVFDVFEAFLNTDNIQVFANAATSYIMCLMKFVKGLGEVDCKEIGDCVPGAGATSTDLCLPALDYLRRCSQLLAKIYKMPLKPIFLSGRLASLPRRLQEQSASSEDGIESVLSDFDDDTGLIDVWIILLEQLTAAVSICPRQHQPPTLDLLFELLRDVTKTPGPGFGIYAVVHLLLPVMSLWLRRSHKDHSYWDVASANFKHAIGLSCELVVEHIQSFLHSDIRYESMINTMLKDLFELLVVCVAKPTETISRVGCSCIRYVLVTAGPVFTEEMWRLACCALQDAFSATLKPVKDLLGCFHSGTEGFSGEGCQVRVAAPSSSPSAEAEYWRIRAMAQQVFMLDTQSSPKTPNNFDHAQSCQLIIELPPDERPNGHAKKSVSFREIVVSLLSHQVLLQNLYDILLEEFVKGPSPGEEKTVQAPDTKLAGFLRYISMQNLAVIFDLLLDSYRTAREFDTSPGLKCLLKKVSGIGGAANLYRQSAMSFNIYFHALVCAVLTNQETITAEQVKKVLFEEEERSSDSSQQCSSEDEDIFEETAQVSPPRGKEKRQWRARLPSLSVQPVSNADWVWLVKRLHKLCMELCNHYIQMHLDLESSLEEPLAFKSDPFFILPSFQSESSTPSTGGFSGKNTPSEDDRREHLSEPLSLRVGSGDILMLPPSPKTEKKDPGRKKEWWESAGNKIYTMAADKTISKLMTEYKKRRQPHNLPPFPKEVKVDKKGEPLGPRGPDSPLLQRPQHLIDQGQMRHSFSAGPELLRQEKRPRSGSTGSSLSISVRDAEAQIQAWTNMVLTVLNQIQILPDPTFTALQPAVFPCISQLTCHVTDIRVRQAVREWLGRVGRVYDIIV", "length": 2171 }, "evidence": [ { "id": "A0A287BAG5", "url": "https://omabrowser.org/oma/group/A0A287BAG5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q3UGY8-1", "protein_name": "Brefeldin A-inhibited guanine nucleotide-exchange protein 3", "gene_name": "Arfgef3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEEILRKLQRDASGSKYKAIKESCTWALETLGGLDTVVKIPPHLLREKCLLPLQLALESKNVKLAQHALAGMQKLLSEERFVSMETDSDEKQLLNQILNAVKVTPSLNEDLQVEVMKVLLCITYTPTFDMNGSAVLKIAEVCIETYTCSCHQRSINTAVRATLSQMLGDLTLQLRQRQENTIIENPDAPQEFRSQGLTVEALCDDVISVLAVLCEKLQASINDSQQLQLLYLECILSVLSSSSSSMHLHRGFTDLIWKSLCPALVVILGNPIHDKTITSAHSTSTSTSMESDSASLGVSDHGRGSGCSCTAPTLSGPVARTIYYLAAELVRLVGSVDSMKPVLQSLYHRVLLYPPPQHRVEAIKIMKEILGSPQRLYDLAGPSSIESEPRKRSISKRKSHLDLLKLIMDGMTEACIKGGIEACYAAVSCVCTLLGALDELSQGKGLNDTQVQQLLLRLEELRDGAESSRDSMEINEADFRWQRRVLSSEHTPWESGNERSPDISISVTTDTGQTTLEGELGQTTPEDHKNGLKSPAIQEGKGTMGKVSEPEAIDQPDVVQRSHTVPYPDITNFLSVDCRTRSYGSRYSESNFSVDDQDLSRTEFDSCDQYSMAAEKDSGRSDVSDIGSDNCSLADEEQTPRDYIGHRSLRTAALSLKLLKNQEADQHSARLFIQSLEGLLPRLLALSSVEEVDSALQNFASTFCSGMMHSPGFDGGSSLSFQMLMNADSLYTAAHCALLLNLKLSHGDYYRKRPTVAPGMMKEFMKQVQTSGVLMVFSQAWLEELYHQVLDRNMLGEAGYWGSPEDNSLPLITMLTDIDGLESSAIGGQLMASASVESPFTQSRRLDDSTVAGVAFARYILVGCWKNLIDTLSTPLTGRMAGSSKGLAFILGAEGIKEQNQKERDAICMSLDGLRKAARLSCALGVAANCASALAQMAAASCVQEEKEERQSQEPSDALAQVKLKVEQKLEQMGKVQGVWLHTAHVLCMDAILSVGLEMGSHNPDCWPHVFRVCEYVGTLEHTHFSDGISQPPLTIHQPQKTSGSSGLLGEIEFKSSSQEQSLEQGPSLNTAPVVQPHSIQELVRECSRGRTSDFRGGSLSGNSAAKVVLSLSTQADRLFDDATDKLNLTALGGFLYQLKKASQSQLFHSVTDTVDYSLTMPGEVKSTQDQKSALHLFRLGDAMLRIVRSKARPLLHVMRCWSLVAPHLVEAACHKERHVSQKAVSFIHDILTEVLTDWSEPPHFHFNEALFRPFERIMQLELCDEDVQDQVVTSIGELVEVCSAQIQSGWRPLFSALETVRSGNKSEVKEYLVGDYSMGKGQAPVFDVFEAFLNTDNIQVFANAATSYIMCLMKFVKGLGEVDCKEIGDCVPGAGATSTDLCLPALDYLRRCSQLLAKIYKMPLKPIFLSGRLASLPRRLQEQSASSEDGIESVLSDFDDDTGLIEVWIILLEQLTAAVSNCPRQHQPPTLDLLFELLRDVTKTPGPGFGIYAVVHLLLPVMSLWLLRSHKDHSYWDVASANFKHAIGLSCELVVEHIQSFLHSDIRYESMINTMLKDLFELLVVCVAKPTETISRVGCSCIRYVLVTAGPVFTEEMWRLACCALQDAFSATLKPVKDLLGCFHGGTEGFSGEGCQVRVAAPSSSPSAEAEYWRIRAMAQQVFMLDTQCSPKTPNNFDHAQSCQLIIELPHDEKPNGHAKKSVSFREIVVSLLSHQVLLQNLYDILLEEFVKGPSPGEEKTVQVPDTKLAGFLRYISMQNLAVIFDLLLDSYRTAREFDTSPGLKCLLKKVSGIGGAANLYRQSAMSFNIYFHALVCAVLTNQETITAEQVKKVLFEEEERSSDSSQQCSSEDEDIFEETAQVSPPRGKEKRQWRARLPSLSVQPVSNADWVWLVKRLHKLCMELCNHYIQMHLDLESSLEEPLTFKSDPFFILPSFQSESSTPSTGGFSGKNTPSEDDRREHLSEPQSLRVGSGDMLMLPPSPKTEKKDPGRKKEWWESAGNKICTMAADKTISKLMTEYKKRRQPHNLPPFPKEVKVDKKGEPLGPRGPDSPLLQRPQHLIDQGQMRHSFSAGPELLRQEKRPRSGSTGSSLSVSVRDAEAQIQAWTNMVLTVLNQIQILPDQTFTALQPAVFPCISQLTCHVTDIRVRQAVREWLGRVGRVYDIIT", "length": 2170 }, "evidence": [ { "id": "A0A287BAG5", "url": "https://omabrowser.org/oma/group/A0A287BAG5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5TH69-1", "protein_name": "Brefeldin A-inhibited guanine nucleotide-exchange protein 3", "gene_name": "ARFGEF3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEILRKLQKEASGSKYKAIKESCTWALETLGGLDTIVKIPPHVLREKCLLPLQLALESKNVKLAQHALAGMQKLLSEERFVSMETDSDEKQLLNQILNAVKVTPSLNEDLQVEVMKVLLCITYTPTFDLNGSAVLKIAEVCIETYISSCHQRSINTAVRATLSQMLSDLTLQLRQRQENTIIENPDVPQDFGNQGSTVESLCDDVVSVLTVLCEKLQAAINDSQQLQLLYLECILSVLSSSSSSMHLHRRFTDLIWKNLCPALIVILGNPIHDKTITSAHTSSTSTSLESDSASPGVSDHGRGSGCSCTAPALSGPVARTIYYIAAELVRLVGSVDSMKPVLQSLYHRVLLYPPPQHRVEAIKIMKEILGSPQRLCDLAGPSSTESESRKRSISKRKSHLDLLKLIMDGMTEACIKGGIEACYAAVSCVCTLLGALDELSQGKGLSEGQVQLLLLRLEELKDGAEWSRDSMEINEADFRWQRRVLSSEHTPWESGNERSLDISISVTTDTGQTTLEGELGQTTPEDHSGNHKNSLKSPAIPEGKETLSKVLETEAVDQPDVVQRSHTVPYPDITNFLSVDCRTRSYGSRYSESNFSVDDQDLSRTEFDSCDQYSMAAEKDSGRSDVSDIGSDNCSLADEEQTPRDCLGHRSLRTAALSLKLLKNQEADQHSARLFIQSLEGLLPRLLSLSNVEEVDTALQNFASTFCSGMMHSPGFDGNSSLSFQMLMNADSLYTAAHCALLLNLKLSHGDYYRKRPTLAPGVMKDFMKQVQTSGVLMVFSQAWIEELYHQVLDRNMLGEAGYWGSPEDNSLPLITMLTDIDGLESSAIGGQLMASAATESPFAQSRRIDDSTVAGVAFARYILVGCWKNLIDTLSTPLTGRMAGSSKGLAFILGAEGIKEQNQKERDAICMSLDGLRKAARLSCALGVAANCASALAQMAAASCVQEEKEEREAQEPSDAITQVKLKVEQKLEQIGKVQGVWLHTAHVLCMEAILSVGLEMGSHNPDCWPHVFRVCEYVGTLEHNHFSDGASQPPLTISQPQKATGSAGLLGDPECEGSPPEHSPEQGRSLSTAPVVQPLSIQDLVREGSRGRASDFRGGSLMSGSSAAKVVLTLSTQADRLFEDATDKLNLMALGGFLYQLKKASQSQLFHSVTDTVDYSLAMPGEVKSTQDRKSALHLFRLGNAMLRIVRSKARPLLHVMRCWSLVAPHLVEAACHKERHVSQKAVSFIHDILTEVLTDWNEPPHFHFNEALFRPFERIMQLELCDEDVQDQVVTSIGELVEVCSTQIQSGWRPLFSALETVHGGNKSEMKEYLVGDYSMGKGQAPVFDVFEAFLNTDNIQVFANAATSYIMCLMKFVKGLGEVDCKEIGDCAPAPGAPSTDLCLPALDYLRRCSQLLAKIYKMPLKPIFLSGRLAGLPRRLQEQSASSEDGIESVLSDFDDDTGLIEVWIILLEQLTAAVSNCPRQHQPPTLDLLFELLRDVTKTPGPGFGIYAVVHLLLPVMSVWLRRSHKDHSYWDMASANFKHAIGLSCELVVEHIQSFLHSDIRYESMINTMLKDLFELLVACVAKPTETISRVGCSCIRYVLVTAGPVFTEEMWRLACCALQDAFSATLKPVKDLLGCFHSGTESFSGEGCQVRVAAPSSSPSAEAEYWRIRAMAQQVFMLDTQCSPKTPNNFDHAQSCQLIIELPPDEKPNGHTKKSVSFREIVVSLLSHQVLLQNLYDILLEEFVKGPSPGEEKTIQVPEAKLAGFLRYISMQNLAVIFDLLLDSYRTAREFDTSPGLKCLLKKVSGIGGAANLYRQSAMSFNIYFHALVCAVLTNQETITAEQVKKVLFEDDERSTDSSQQCSSEDEDIFEETAQVSPPRGKEKRQWRARMPLLSVQPVSNADWVWLVKRLHKLCMELCNNYIQMHLDLENCMEEPPIFKGDPFFILPSFQSESSTPSTGGFSGKETPSEDDRSQSREHMGESLSLKAGGGDLLLPPSPKVEKKDPSRKKEWWENAGNKIYTMAADKTISKLMTEYKKRKQQHNLSAFPKEVKVEKKGEPLGPRGQDSPLLQRPQHLMDQGQMRHSFSAGPELLRQDKRPRSGSTGSSLSVSVRDAEAQIQAWTNMVLTVLNQIQILPDQTFTALQPAVFPCISQLTCHVTDIRVRQAVREWLGRVGRVYDIIV", "length": 2177 }, "evidence": [ { "id": "A0A287BAG5", "url": "https://omabrowser.org/oma/group/A0A287BAG5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9W444-1", "protein_name": "SEC7 domain-containing protein", "gene_name": "Dmel\\CG5937", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MEDLFLLIIKESTGTKHNALRQTAQIAYDKLYRQHGIHRDPSHELRSVCFTALQMALDTKRPKFITMGLNGLHRVIKDERFYIGLEPEDDSVWLPSQLLRATNGILPTTSSEDTVVNVLRLFLAMACSPACTLNGRLLIEILSRCGECWEMGSRATKAASLAAASQCLRTFCAFLIEEAEEVKKTAPAGLMTQTQASAVYNEVIPVMQWLCSRLVEPNVNASPNKKCENHSSLYLTECILTLSSALPRNVHANPHFTSFLWQKFCPTLAAALGSPGRINLDKKFTYKDALHMIENEARGFFTGPGLDGPQARCVYLTAIQLLRIAGAHGSLRPMLEALFHRMLLLPAPQNRTEPLRCVREIFKSPERLIDLAVILYVDKNTAQGCSDEMALFRLLVDAMEECAYGASGGGSATEASLQASVECMVALLDSLQVLCSGELTESMISDQIVQVVNGRHDLLKDADYSGPLTYQSMARLPAPYRDAIVEFRQTVFETSSGSESEGEPQHEQDAASNGSGDTEGPEDDDPSSSSDETSRVENRWPYSHLEAPVMPIRTDSDNDRQHARDFARALRQDLVPKLLRLRSCVELDEAMQEFASAVCQENSMNFSDFDYNLTAINADGIYLAIYSSLLLSLQLMRAGFYEQVAQGMSHKDILVPMSEQQFVTSVQNTGVLVYLSSPWLCELYQSVTVCNVLEAMPRQQLEGMGPRCALVDMLCDAGGLGATQMLSEWQRLQTANVKHKEEEQLHDKRREAAKKLCRRLLTCCWDSMVIVLSSGLGDLQTSSASNKLVALSKRTLRVKAKANKSNGEALYAMCLDGLHSAATLSNSLNLQHLAGKILNLLASNVCQTSGPRISASQAMSMDVVLTGGLNLGSYSADCWPSIFAVCRHVSQLEHEIFSMQNPAISASPGSSRRDLETGEKLSNGNAQDKLNLSSIPIDDDETCVDVYSFLQAPMQSPNTNITSILKVYSGTNETVLLSQSDTSKVLCALSHQAENLFGDAAERLSLPSLCQFLKHLCRASRDQLYKSQVARKGSRIWWPSKGWKKLDSLPMSLLLHRIGDVTLKVFRSSRPLLHVLKVWAITGPHLMDAACHRDRMISKRAIEYIHDIITALLVEQSELPYFHFNEALLKPFENLLSMDTDVDVQDQIVACLYEVVEAHRTEIRSGWRPLFGTLRNARSRMLNMSNIIDIFRVFLDSDNTLVFANAGLDCILCLLSYLEISGGGNNNACSGGSGSAAGGTASNGGQQEEDNTFRPTDFLHETLRFLERCSSILGFMHSMPKCPNFHSTYKIKGISYTHIIDANIPSSMENFTYFGNDYLQTRNEQYMISYRSLHIDKDTIVKIDEMDKPSGVLKVWFLLLDGLTNSLIVCPYSHQAPILQTIFKLFKNLLASPGIDFGFYCINHLLVPMIQDWLRYINKTGSSWQLVEKNFKHCCCMTTDLVVEFIEKSVPEQRRLGAGTKTRLAQIVHPADNLLYSKLKFVTERIEREQQQQQSPSVQDHGCGYTQQYDSSSSSASEEQQKNGGGVGGGGSNLIESPTKISGSATLALKQLLLVLIECAAQSQEAIARISVSCLKHVILSTGMLFNESQWMIACSAIHRACTVTIAPLRQLSFAFHEKSNSFYGDCANVKVAARRDSSLEELARIYALAQQVFLSDNQREPGQNQAPTPSASQCKLSDDRSYSFLLYPLNNGFNSNLDNFVIRIPFKNLVVGLLANQMLLQLVAKLLLSRLKCVPQAVSTCIFDNYAASAASPSHDYDLDFRSKEILLRCVKQYLMSALEFDSRPGLKFLMQKVSNIEYAANLYKQMTSSWMIYYIALVDSHLNDIVVYNLGPEDLNFILESCSRLNTTTVKKKENFVRYLFCLQDAWNLVCELYLSNSALHEIESGSGKLRQKPPQLLHHPQTKPMCISLNGNGDAEMTDTGSGSGSGSSTSPSKCVQLQEEENVTMTTLISEFQPKCRSNPFDTNRQAKSSEAESISPEIEQQRASSILKDSNYKRAALAQLVVASMELLRSLPGEAEENLKLLMTPTIREAFRLVQLQGNELKVNQF", "length": 2051 }, "evidence": [ { "id": "A0A287BAG5", "url": "https://omabrowser.org/oma/group/A0A287BAG5/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAG5", "url": "https://www.uniprot.org/uniprotkb/A0A287BAG5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "guanyl-nucleotide exchange factor activity", "id": "GO:0005085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005085", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAG5", "url": "https://www.uniprot.org/uniprotkb/A0A287BAG5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "vesicle-mediated transport", "id": "GO:0016192", "url": 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"Sbk2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPGKQSEDRPMEVAAVEDGGDEGLGGLTVEELQQGQEAALALEDMMALSAQTLVRTEVEELYEEVRPLGQGRFGRVLLVTHRQKGTPLALKQLPKHSTSLRSFLYEFCVGLSLGTHPAIVAAYGIGIESANSYSFLTEPVLHGDLITFIKPKVGLPQPAVQRCAAQLASALEHIHSHGLVYRDLKPENVLVCDPACQRVKLTDFGHTRPRGTMLRLTGPPIPYTAPELCAPPPLPEGLPIQPALDAWALGVLIFCLLTGYFPWDQPLVEVDPFFEDFLIWQASGQPQDRPQPWYNLSPAADTLLWGLLDPHPRKRNPVSSIKSYLGQPWKQREEGAEELTKELREDGSRGGQEAAKGEQPAC", "length": 362 }, "evidence": [ { "id": "A0A287BAN1", "url": "https://omabrowser.org/oma/group/A0A287BAN1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C263-1", "protein_name": "Serine/threonine-protein kinase SBK2", "gene_name": "SBK2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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{ "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": 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"categories": [ "Protein Classification" ] }, { "id": "IPR055310", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055310", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR18871", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR18871", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR18871:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR18871:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF14846", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14846", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287BAP4", "url": "https://www.uniprot.org/uniprotkb/A0A287BAP4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BAP4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BAP4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R495", "url": 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protein 112 OS=Sus scrofa OX=9823 GN=CEP112 PE=4 SV=2 CANONICAL=A0A287BAP4-1" }, "locus": { "chromosome": "12", "start_pos": 12807161, "end_pos": 12397617, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052192.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052192.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053621.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053621.2" } ] } }, { "isoform_ac": "A0A5G2R495-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R495/entry", "sequence": { "sequence": "MEMGSEEEKWEKLDSEFDHFVVDMKPFVLKLPHRSERQRCALWIRKLCEPSGTGAGIMGRKNRNLYAKLLLHMLKRGVLEGPFTHRPEPGTLKTLPSYMSIYFDEPNPAQAKGSSPEGLPDWVMGELGTSEHKLNESWKLSSGEDYSLVQSPTNVHSREQCIAKLQTRSQSMSPTYREDGQIITPKSSEGHSQKSALCLDDSDIEARLNSWNLGIENPRYLRQKPIPITLMTPKFSLRKSSSLHDDHLCSRMHEKELDMKTKMMEAKYHEEKLKLQQKHDADVQKILERKNNEIEEMKTLYKKKQNETEETIRKLEKKVQTLIRECQVIRETKDNQIAELKKICEQSTESLNNDWEKKLHNAVAEMEKEKFELQKRHTENIQELLEDTNIRLNKMEGEYMAQTQSTNQMIKELESRVQQLTGEAENSNLQKQKLVQEKLELERCYQITCNELQEVKARRNTLHKEKDHLVNDYEQSMKLLQTKYDADINLLKKEHALSASKASGMIKELEQTICQLKQQLQESELQRKEQLKDQENKFQMEKSHLKHTYEKKVHDLQSELDKEKEDTQKKIHKFEEALKEKEEQLTRVTEVQRLQAQQADAALEEFKRQVELNSEKVYAEMKEQMEKVEADLTRSKSLREKQSKEFLWQLEDVKQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSLVRDHEREIGNLEKQLRAANMEHENQIQEFKKRDSQVIADMEAQVHKLREELINVNSQRKQQLVELGLLREEEKQRAARDHETTVNKLKAESEKMKMELKKTHAAETEMTLEKANSRLKQIEKEYTQKLAKSSQIIAELQTTISSLKEENSRQQLAAERRLQDVIQKFEDEKKQLIRDNDRAIKFHSLDSLPLMYPVTQAGFPRKDHMPA", "length": 895, "header": "tr|A0A5G2R495-1|A0A287BAP4_PIG Computationally mapped isoform of 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Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R495", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R495" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "centrosome", "id": "GO:0005813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005813", "evidence": [ { "database": "UniProtKB", "id": "A0A287BAP4", "url": "https://www.uniprot.org/uniprotkb/A0A287BAP4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "molecular condensate scaffold activity", "id": "GO:0140693", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140693", "evidence": [ { 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"Protein Classification" ] }, { "id": "XP_005657385", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005657385", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287BB11", "url": "https://www.uniprot.org/uniprotkb/A0A287BB11", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BB11-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BB11-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TBP3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TBP3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TBP3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TBP3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QG65", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG65", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QG65-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG65-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R6W8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6W8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R6W8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6W8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MYKFFSAIQWIQFVMATLSVIGSSSLIAYAIFQNIQKSPEIRPIFYLSFSDLLLGICWLMEALLYGTSAASKDIFCYNLQAVGQIFYISSFLYTVYYIWYLYKELRMKHNQSGQSTFLPVIDHTYQVGQIVIVLSSLIPLLLMIPVFCLGNASECFRNFSQSHRCILMYSPPSAMAELLPSANTSVCSTLYFYGLIIFLASFLLSLFIIVVLLIQAQALFKKFVKSTGFLGSEQWAAIHIVEQQVLFYPVAFFCCWGPAAILMIIKLMKPQDTKLHMALYVLQALTGSSQGLLNCGVYGWTQYKFHQLKQKARRDADTQTPLLCSQKRFYSRGLSPLESTLAFATSTSDIF", "length": 351, "header": "tr|A0A287BB11-1|A0A287BB11_PIG Isoform 1 of Transmembrane protein 116 OS=Sus scrofa OX=9823 GN=TMEM116 PE=4 SV=1 CANONICAL=A0A287BB11-1" }, "isoforms": [ { "isoform_ac": "A0A287BB11-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BB11/entry", "sequence": { "sequence": "MYKFFSAIQWIQFVMATLSVIGSSSLIAYAIFQNIQKSPEIRPIFYLSFSDLLLGICWLMEALLYGTSAASKDIFCYNLQAVGQIFYISSFLYTVYYIWYLYKELRMKHNQSGQSTFLPVIDHTYQVGQIVIVLSSLIPLLLMIPVFCLGNASECFRNFSQSHRCILMYSPPSAMAELLPSANTSVCSTLYFYGLIIFLASFLLSLFIIVVLLIQAQALFKKFVKSTGFLGSEQWAAIHIVEQQVLFYPVAFFCCWGPAAILMIIKLMKPQDTKLHMALYVLQALTGSSQGLLNCGVYGWTQYKFHQLKQKARRDADTQTPLLCSQKRFYSRGLSPLESTLAFATSTSDIF", "length": 351, "header": "tr|A0A287BB11-1|A0A287BB11_PIG Isoform 1 of Transmembrane protein 116 OS=Sus scrofa OX=9823 GN=TMEM116 PE=4 SV=1 CANONICAL=A0A287BB11-1" }, "locus": { "chromosome": "14", "start_pos": 39800847, "end_pos": 39698430, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053309.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053309.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053250.1", "url": "https://www.ensembl.org/id/ENSSSCP00000053250.1" } ] } }, { "isoform_ac": "A0A4X1TBP3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TBP3/entry", "sequence": { "sequence": "MFPQLQPEPQVLLIQAQALFKKFVKSTGFLGSEQWAAIHIVEQQVLFYPVAFFCCWGPAAILMIIKLMKPQDTKLHMALYVLQALTGSSQGLLNCGVYGWTQYKFHQLKQKARRDADTQTPLLCSQKRFYSRGLSPLESTLAFATSTSDIF", "length": 151, "header": "tr|A0A4X1TBP3-1|A0A4X1TBP3_PIG Computationally mapped isoform of Transmembrane protein 116 OS=Sus scrofa OX=9823 GN=TMEM116 PE=4 SV=1 CANONICAL=A0A287BB11-1" }, "locus": { "chromosome": "14", "start_pos": 39800847, "end_pos": 39778551, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089999.1", "url": "https://www.ensembl.org/id/ENSSSCT00000089999.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062460.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062460.1" } ] } }, { "isoform_ac": "A0A5G2QG65-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG65/entry", "sequence": { "sequence": "MEALLYGTSAASKDIFCYNLQAVGQIFYISSFLYTVYYIWYLYKELRMKHNQSGQSTFLPVIDHTYQVGQIVIVLSSLIPLLLMIPVFCLGNASECFRNFSQSHRCILMYSPPSAMAELLPSANTSVCSTLYFYGLIIFLASFLLSLFIIVVLLIQAQALFKKFVKSTGFLGSEQWAAIHIVEQQVLFYPVAFFCCWGPAAILMIIKLMKPQDTKLHMALYVLQALTGSSQGLLNCGVYGWTQYKFHQLKQKARRDADTQTPLLCSQKRFYSRGLSPLESTLAFATSTSDIF", "length": 292, "header": "tr|A0A5G2QG65-1|A0A287BB11_PIG Computationally mapped isoform of Transmembrane protein 116 OS=Sus scrofa OX=9823 GN=TMEM116 PE=4 SV=2 CANONICAL=A0A287BB11-1" }, "locus": { "chromosome": "14", "start_pos": 39800847, "end_pos": 39728967, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077540.2", "url": "https://www.ensembl.org/id/ENSSSCT00000077540.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061015.2", "url": "https://www.ensembl.org/id/ENSSSCP00000061015.2" } ] } }, { "isoform_ac": "A0A5G2R6W8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6W8/entry", "sequence": { "sequence": "MYKFFSAIQWIQFVMATLSVIGSSSLIAYAIFQNIQKSPEIRPIFYLSFSDLLLGICWLMEALLYGTSAASKDIFCYNLQAVGQVIDHTYQVGQIVIVLSSLIPLLLMIPVFCLGNASECFRNFSQSHRCILMYSPPSAMAELLPSANTSVCSTLYFYGLIIFLASFLLSLFIIVVLLIQAQALFKKFVKSTGFLGSEQWAAIHIVEQQVLFYPVAFFCCWGPAAILMIIKLMKPQDTKLHMALYVLQALTGSSQGLLNCGVYGWTQYKFHQLKQKARRDADTQTPLLCSQKRFYSRGLSPLESTLAFATSTSDIF", "length": 316, "header": "tr|A0A5G2R6W8-1|A0A287BB11_PIG Computationally mapped isoform of Transmembrane protein 116 OS=Sus scrofa OX=9823 GN=TMEM116 PE=4 SV=2 CANONICAL=A0A287BB11-1" }, "locus": { "chromosome": "14", "start_pos": 39800847, "end_pos": 39698430, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084788.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084788.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066346.2", "url": "https://www.ensembl.org/id/ENSSSCP00000066346.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG65", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG65" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7JLW7-1", "protein_name": "Transmembrane protein 116 isoform X1", "gene_name": "Tmem116", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MILYIASLLYTVNYIWYLYSELRMKHSQSGQSTAAQLIDHTCQSGNIVFILSSLIPLLLMTPVFCLGNVNGCFHNSSQSHRCVLMHSPPSAMIELLPSTNTSVCSTLYFYGVTVFLTSFFFSLLIITVLLLHAQTLYKKFVKSTGFLESEQWAVIYIVGQRVRFFPVAFVCCWGPAVTLLIIKLVKPQDTSLHMAFSVLQALTAASQGLLNCGIYGWTQCKFQQLKRELRCDADTQTPLLCSQKRIYCRSLALGPPDSSLTFAPSSSTIL", "length": 270 }, "evidence": [ { "id": "A0A287BB11", "url": "https://omabrowser.org/oma/group/A0A287BB11/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AAA9SW93-1", "protein_name": "Transmembrane protein 116", "gene_name": "TMEM116", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVVRPFLPLPKSDIRPALFFSAIQWIQFVMATLSVIGSSSLVAYAIFQNIQKSPERRPLFYLSFSDLLLGIYWLTEALLYGTSTASKDIVCYNLQVVGQVLYISSFFYTINYIWYLYKELRMKPSQSAQRTFSLVIDYTCRIGQIAIILSSLIPLLLMVPVFCLGNVSECFRNFSQSHRCILIYSPPPAMAELLPSANTSVCSTLYFYGLIIFLASFVLSFFTIVVLLIQAQILYKKFLKSTGFLGSEQWAVIHIMEQRVRFYPVAFFCCWSPVVILMIIKLTKLQDTRLHMALYVLQPCLWLQKSLYCTTTCSSWGNGIPWTEEPGRLLVHGVSRVGHDLVTKPPPPPINQSMESVNIFGILVTYYSRIWNHCQPQST", "length": 379 }, "evidence": [ { "id": "A0A287BB11", "url": "https://omabrowser.org/oma/group/A0A287BB11/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0ABK0LUC5-1", "protein_name": "Transmembrane protein 116", "gene_name": "Tmem116", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLGADLGSPRLLVIILHACFLFPAIQWIQFAVATLSVIGSSSLITYIVFQNPQKSAEVKSLLYLSFSDLLLGICWLIKALVYGTAAAHKDSICYNLQTAGEIFYLASLVFTVSYIWCLYAELRRKHSPSEQSTAAQVTDYACQGGCVMFLLSSLTPLLLMTPVFFLGNVNECFHNFSQNHRCMLMHSEPLPSTNTSVCSTLYLYGVTVFLASFFFSLLTIVVLLVLAQTLYKKFVKSMGLLESEQWAVIHTVGQRVRFFPAAFVCCWGPAVTLLIMKLTKPQETSLHVALSVLQALTAASQGLLNCGIYGWTQCKFQQIKREPPRDADTQTPLLCSQKRVYSRSPSASRPPLAFASSSSTVL", "length": 362 }, "evidence": [ { "id": "A0A287BB11", "url": "https://omabrowser.org/oma/group/A0A287BB11/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A2BGS3-1", "protein_name": "Transmembrane protein 116", "gene_name": "tmem116", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDIFGENKTQMNTTTPTENWTSVYSIVRWIQMTMAVLSILGAGSIILYAAFQRLVKKPEVLPLFLLSLTDLLLALSWLCGGLLFTQSCNSYATCYNLHIVEQTLYMASFFYTLHYVWVLYTGLNGKYHRRLNGFPAEAARTRNCRCLGPVLSCLLPLLLTAPVFVAGNVFQCYTNFTQPYRCLLMHTGAVYLTSSASPELTACSIIQEYCMAIFLGTFLITIVGMSIFMGKARSLYKRVVTSQGFFGGSHWTTLRLLERRMVLYPSAFFFCWGPALLLATMMLVKPDVIEGKMGVALYILQAFTSASQGLLNCLVYGWTQKHFRSLSSSTVRDANTQTPLLRSQKPNYAALHSAASLTNFV", "length": 361 }, "evidence": [ { "id": "A0A287BB11", "url": "https://omabrowser.org/oma/group/A0A287BB11/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "G3X9M9-1", "protein_name": "Transmembrane protein 116", "gene_name": "Tmem116", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAFPLETSRLEGRWEPLFPAIQWIQFAVATLSVIGSSSLLTYIAFQSPQKSAEIKPLLYLSFSDLLLGICWLVKALLYGTAAAHKDSICYNLQTVGEIFYLASLLYTVSYIWCLYSELRRKSGQSERSTVAQVTDYVCQGGHILFLLSSLIPPLLMTPVFLLGNVNECFHNFSESHRCILMHSPPSATPEPLPSTNTSVCSTLYFYGVTIFLASFFFSFLTIMVLLVHAQMLYKKFVKSTGLLESEQWAVIHTVGQRVRFFPVAFVCCWGPAVTLLIMKLTEPQETFLHMALSVLQALTAASQGLLNCGIYGWTQCKFQQIKREPHRDADTQTPLLCSQKRIYSRSPNLLESPLALASSSSTVL", "length": 364 }, "evidence": [ { "id": "A0A287BB11", "url": "https://omabrowser.org/oma/group/A0A287BB11/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8NCL8-1", "protein_name": "Transmembrane protein 116", "gene_name": "TMEM116", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKHTQSGQSTSPLVIDYTCRVCQMAFVFSSLIPLLLMTPVFCLGNTSECFQNFSQSHKCILMHSPPSAMAELPPSANTSVCSTLYFYGIAIFLGSFVLSLLTIMVLLIRAQTLYKKFVKSTGFLGSEQWAVIHIVDQRVRFYPVAFFCCWGPAVILMIIKLTKPQDTKLHMALYVLQALTATSQGLLNCGVYGWTQHKFHQLKQEARRDADTQTPLLCSQKRFYSRGLNSLESTLTFPASTSTIF", "length": 245 }, "evidence": [ { "id": "A0A287BB11", "url": "https://omabrowser.org/oma/group/A0A287BB11/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "G protein-coupled receptor activity", "id": "GO:0004930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004930", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB11", "url": "https://www.uniprot.org/uniprotkb/A0A287BB11" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB11", "url": "https://www.uniprot.org/uniprotkb/A0A287BB11" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB11", "url": "https://www.uniprot.org/uniprotkb/A0A287BB11" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "adenylate cyclase-activating G protein-coupled receptor signaling pathway", "id": "GO:0007189", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007189", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB11", "url": "https://www.uniprot.org/uniprotkb/A0A287BB11" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB11", "url": "https://www.uniprot.org/uniprotkb/A0A287BB11" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 110, "end_pos": 112, "annotation": "n_glycosylation_sequon" }, { "start_pos": 151, "end_pos": 153, "annotation": "n_glycosylation_sequon" }, { "start_pos": 158, "end_pos": 160, "annotation": "n_glycosylation_sequon" }, { "start_pos": 183, "end_pos": 185, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287BB11-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 351, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287BB11-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287BB11" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287BB11", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BB11" }, { "id": "PS50262", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50262" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "G-protein coupled receptors family 1 profile", "eco_id": "ECO_0000259", "start_pos": 23, "end_pos": 298, "start_aa": "Ser", "end_aa": "Tyr", "glycosite_overlap": [] } ], 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287BB63-1", "uniprot_ac": "A0A287BB63", "uniprot_id": "A0A287BB63_PIG", "mass": { "chemical_mass": 75476.0, "monoisotopic_mass": 75476.0 }, "refseq": {}, "gene_names": [ { "name": "ZNF251", "type": "recommended", "evidence": [ { "id": "A0A287BB63", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BB63" } ] } ], "protein_names": [ { "name": "Zinc finger protein 251", "type": "synonym", "evidence": [ { "id": "A0A287BB63", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BB63/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "May be involved in transcriptional regulation.", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB63", "url": "https://www.uniprot.org/uniprotkb/A0A287BB63#function" }, { "database": "UniProtKB", "id": "ARBA00003767", "url": "https://www.uniprot.org/uniprotkb/ARBA00003767#function" }, { "database": "UniProtKB", "id": "I3LAN2", "url": "https://www.uniprot.org/uniprotkb/I3LAN2#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BB63", "url": "https://www.uniprot.org/uniprotkb/A0A287BB63" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZNF251", "url": "https://www.uniprot.org/uniprotkb/A0A287BB63", "locus": { "chromosome": "4", "start_pos": 193130, "end_pos": 186673, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000022161", "url": "https://www.ensembl.org/id/ENSSSCG00000022161" } ] } } ], "crossref": [ { "id": "cd07765", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07765", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001909", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001909", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036051", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036051", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050826", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050826", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IHIKKIF", "url": "https://omabrowser.org/oma/group/IHIKKIF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR24377", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24377", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01352", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01352", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287BB63", "url": "https://www.uniprot.org/uniprotkb/A0A287BB63", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BB63-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BB63-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LAN2", "url": "https://www.uniprot.org/uniprotkb/I3LAN2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LAN2-1", "url": "https://www.uniprot.org/uniprotkb/I3LAN2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRKRPQPGLRSSQDWEADLEAGDQAEVVPLTFQDVAVYFSWEEGRQLGPDQRTLYRDVMLENYGHVASLGLPVSKPELISQLEQGEEWWVLGLLRAEQQEVLSRTDSVIGTEKELFILNQKCSEEVKTPELISTTFSRGNPQASKLQKAWDIENKLEEHLGNPFGESLKKPHLHKRVFSKEIFMCRQRSPGERIQKCGTFDRNLSLNQNVVRLQKTRTGERGFKCDICSKTFKYNSDLSKHQRNHPREKPYECGQCGRTFTHSSGLILHQQVHTGNKPFKCNECGKKFGLHSYLLLHQRIHTGEKPFGCSECGKAFSRSSTLIQHRVTHTGEKPYKCNTCGKAFSQNPQLAQHQRIHTGERPHACSQCGKAFRRSSSLIQHQRIHTGEKPHKCSQCGKTFSQSSSLFLHHRVHTGEKPYACTECGRAFGFNSHLTEHIRIHTGEKPYVCAECGKAFSRSSTLVQHRRVHSGEKPYQCPDCGKAFSQSSQLVLHHRVHTGEKPYECGDCGKAFSRRSTLTQHQKIHSRQNPHECRKCAAACVHGSSHRPRGWIHTGEKHSVYDRCHGTNLVLHWTVHSGEKSFRGDERCKPSSPSTQPTKHQKTGAGEKLYKSQDCGNSFSQGSTLTEYEVTPAGERSYCCHVWEHLQPDLMTHSISKSTCERHL", "length": 664, "header": "tr|A0A287BB63-1|A0A287BB63_PIG Isoform 1 of Zinc finger protein 251 OS=Sus scrofa OX=9823 GN=ZNF251 PE=3 SV=1 CANONICAL=A0A287BB63-1" }, "isoforms": [ { "isoform_ac": "A0A287BB63-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BB63/entry", "sequence": { "sequence": "MRKRPQPGLRSSQDWEADLEAGDQAEVVPLTFQDVAVYFSWEEGRQLGPDQRTLYRDVMLENYGHVASLGLPVSKPELISQLEQGEEWWVLGLLRAEQQEVLSRTDSVIGTEKELFILNQKCSEEVKTPELISTTFSRGNPQASKLQKAWDIENKLEEHLGNPFGESLKKPHLHKRVFSKEIFMCRQRSPGERIQKCGTFDRNLSLNQNVVRLQKTRTGERGFKCDICSKTFKYNSDLSKHQRNHPREKPYECGQCGRTFTHSSGLILHQQVHTGNKPFKCNECGKKFGLHSYLLLHQRIHTGEKPFGCSECGKAFSRSSTLIQHRVTHTGEKPYKCNTCGKAFSQNPQLAQHQRIHTGERPHACSQCGKAFRRSSSLIQHQRIHTGEKPHKCSQCGKTFSQSSSLFLHHRVHTGEKPYACTECGRAFGFNSHLTEHIRIHTGEKPYVCAECGKAFSRSSTLVQHRRVHSGEKPYQCPDCGKAFSQSSQLVLHHRVHTGEKPYECGDCGKAFSRRSTLTQHQKIHSRQNPHECRKCAAACVHGSSHRPRGWIHTGEKHSVYDRCHGTNLVLHWTVHSGEKSFRGDERCKPSSPSTQPTKHQKTGAGEKLYKSQDCGNSFSQGSTLTEYEVTPAGERSYCCHVWEHLQPDLMTHSISKSTCERHL", "length": 664, "header": "tr|A0A287BB63-1|A0A287BB63_PIG Isoform 1 of Zinc finger protein 251 OS=Sus scrofa OX=9823 GN=ZNF251 PE=3 SV=1 CANONICAL=A0A287BB63-1" }, "locus": { "chromosome": "4", "start_pos": 192906, "end_pos": 187053, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051586.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051586.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059183.2", "url": "https://www.ensembl.org/id/ENSSSCP00000059183.2" } ] } }, { "isoform_ac": "I3LAN2-1", "url": "https://www.uniprot.org/uniprotkb/I3LAN2/entry", "sequence": { "sequence": "MEVVPLTFQDVAVYFSWEEGRQLGPDQRTLYRDVMLENYGHVASLGLPVSKPELISQLEQGEEWWVLGLLRAEQQEVLSRTDSVIGTEKELFILNQKCSEEVKTPELISTTFSRGNPQASKLQKAWDIENKLEEHLGNPFGESLKKPHLHKRVFSKEIFMCRQRSPGERIQKCGTFDRNLSLNQNVVRLQKTRTGERGFKCDICSKTFKYNSDLSKHQRNHPREKPYECGQCGRTFTHSSGLILHQQVHTGNKPFKCNECGKKFGLHSYLLLHQRIHTGEKPFGCSECGKAFSRSSTLIQHRVTHTGEKPYKCNTCGKAFSQNPQLAQHQRIHTGERPHACSQCGKAFRRSSSLIQHQRIHTGEKPHKCSQCGKTFSQSSSLFLHHRVHTGEKPYACTECGRAFGFNSHLTEHIRIHTGEKPYVCAECGKAFSRSSTLVQHRRVHSGEKPYQCPDCGKAFSQSSQLVLHHRVHTGEKPYECGDCGKAFSRRSTLTQHQKIHSRQNPHECRKCAAACVHGSSHRPRGWIHTGEKHSVYDRCHGTNLVLHWTVHSGEKSFRGDERCKPSSPSTQPTKHQKTGAGEKLYKSQDCGNSFSQGSTLTEYEVTPAGERSYCCHVWEHLQPDLMTHSISKSTCERHL", "length": 640, "header": "tr|I3LAN2-1|A0A287BB63_PIG Computationally mapped isoform of Zinc finger protein 251 OS=Sus scrofa OX=9823 GN=ZNF251 PE=3 SV=3 CANONICAL=A0A287BB63-1" }, "locus": { "chromosome": "4", "start_pos": 192906, "end_pos": 187494, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026815.4", "url": "https://www.ensembl.org/id/ENSSSCT00000026815.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021100.3", "url": "https://www.ensembl.org/id/ENSSSCP00000021100.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LAN2", "url": "https://www.uniprot.org/uniprotkb/I3LAN2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7FKM4-1", "protein_name": "Zinc finger protein 251 isoform X1", "gene_name": "Znf251", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MFNWSLSGPLVSALLPHQKSRSHTPWCTLSILSFQGEMPLTFQDVAVYFSRAEGQQLGPQERALYRDVMLENYGNVASLGFPVPKPELISQLEQEEELWVLDLLGAEEPEVLRHCQTDSETEKELSILNQECFEEVKTPESISQKFPRANSPTPEFQEAWDHEGQGEGNQGSSSQSLKRVAREDSPVCREQLPENAQTPAFDRHLNASQSVVTIQRNKTGQRVFKCDICNKTFKYNSDLSRHRRSHTGEKPYECGPCGRAFTHNSNLILHQRIHTGNKPFKCDECGKTFGLNSYLRLHQRIHTGEKPFGCNECGKAFSRSSSLIQHRIIHTGEKPYKCNECGKAFSQSPQLTQHQRVHTGEKPHGCSWCGKAFSRNASLIQHQRIHTGEKPHKCSQCGKAFSQSSSLFLHHRVHTGEKPYVCSECGRAFGFNSHLTEHVRIHTGEKPYVCSECGKAFSRSSTLMQHRRVHTGEKPYQCTECGKAFIQSSQLTLHQRVHTGEKPYECGLCGKAFSRRSALTQHQRIHMAENPREFECGPDFVYDSSHLPTGERHGRAFSHSAKLVLQWTIRSDEKSRGCNECGKTFSTSSQSMEYQKIQAGEKPYKRQECGKAGSGVSSHSQHHVTRVGEKPQLNDGSERYLIHIKKIFQERHF", "length": 653 }, "evidence": [ { "id": "A0A287BB63", "url": "https://omabrowser.org/oma/group/A0A287BB63/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "H7C5Y4-1", "protein_name": "Zinc finger protein 251", "gene_name": "Zfp251", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAKSCSRTPGEMPLTFQDVAVYFSRAEGQQLSPQERALYRDVMLENYGNVASLGFPGPKPELISQLEQEEELWVLDLLGAEEPEVLRSCGTDSEIKSEKERSILNQKCSEEVKTPELSQKFPRANSQASESKEACAHESQGDGSQGSSATQGLKGVAKKDSTVCREHLPENTQASSAFDKHLNPSQSGVTIQRNKTGQRIFKCDICNKMFKYNSDLSRHRRSHTGEKPYECGPCGRAFTHSSNLILHQRIHTGNKPFKCDECGKTFGLNSYLRLHQRIHTGEKPFGCNECGKAFSRSSSLIQHRIIHTGEKPYKCNECGKAFSQSPQLTQHQRIHTGEKPHGCSWCGKAFSRNASLIQHQRIHTGEKPHKCTQCGKAFSQSSSLFLHHRVHTGEKPYVCGECGRAFGFNSHLTEHVRIHTGEKPYVCGECGKAFSRSSTLMQHRRVHTGEKPYQCAECGKAFIQSSQLTLHQRVHTGEKPYECGLCGKAFSRRSALTQHRRVHMGESPQEFECGPDFVYDSSSHLSAGERHGGTFSHSAKLVLQWTIRSEEKPRGCRECGKTYSSSSQSVDYQRIQAGEKPSTCQECGGKAGSGVSPLTPHHVTRVGEKPQLKDGSERYLIQIKKIFQERHF", "length": 633 }, "evidence": [ { "id": "A0A287BB63", "url": "https://omabrowser.org/oma/group/A0A287BB63/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9BRH9-1", "protein_name": "Zinc finger protein 251", "gene_name": "ZNF251", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAATFQLPGHQEMPLTFQDVAVYFSQAEGRQLGPQQRALYRDVMLENYGNVASLGFPVPKPELISQLEQGKELWVLNLLGAEEPDILKSCQKDSEVGTKKELSILNQKFSEEVKTPEFVSRRLLRDNAQAAEFREAWGREGKLKERVGNSAGQSLNKPNIHKRVLTEATVGRERSLGERTQECSAFDRNLNLDQNVVRLQRNKTGERVFKCDICSKTFKYNSDLSRHQRSHTGEKPYECGRCGRAFTHSSNLVLHHHIHTGNKPFKCDECGKTFGLNSHLRLHRRIHTGEKPFGCGECGKAFSRSSTLIQHRIIHTGEKPYKCNECGRGFSQSPQLTQHQRIHTGEKPHECSHCGKAFSRSSSLIQHERIHTGEKPHKCNQCGKAFSQSSSLFLHHRVHTGEKPYVCNECGRAFGFNSHLTEHVRIHTGEKPYVCNECGKAFRRSSTLVQHRRVHTGEKPYQCVECGKAFSQSSQLTLHQRVHTGEKPYDCGDCGKAFSRRSTLIQHQKVHSGETRKCRKHGPAFVHGSSLTADGQIPTGEKHGRAFNHGANLILRWTVHTGEKSFGCNEYGKAFSPTSRPTEDQIMHAGEKPYKCQECGNAFSGKSTLIQHQVTHTGQKPCHCSVYGKAFSQSSQLTPPQQTRVGEKPALNDGSKRYFIHIKKIFQERHF", "length": 671 }, "evidence": [ { "id": "A0A287BB63", "url": "https://omabrowser.org/oma/group/A0A287BB63/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB63", "url": "https://www.uniprot.org/uniprotkb/A0A287BB63" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB63", "url": "https://www.uniprot.org/uniprotkb/A0A287BB63" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB63", "url": "https://www.uniprot.org/uniprotkb/A0A287BB63" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB63", "url": "https://www.uniprot.org/uniprotkb/A0A287BB63" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB63", "url": "https://www.uniprot.org/uniprotkb/A0A287BB63" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB63", "url": "https://www.uniprot.org/uniprotkb/A0A287BB63" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB63", "url": "https://www.uniprot.org/uniprotkb/A0A287BB63" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A287BB63", "url": "https://www.uniprot.org/uniprotkb/A0A287BB63" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 203, "end_pos": 205, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287BB63", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BB63" }, { "id": "PS50157", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50157" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2H2-type", "eco_id": "ECO_0000259", "start_pos": 223, "end_pos": 250, "start_aa": "Phe", "end_aa": "Pro", "glycosite_overlap": [] }, { "evidence": [ { "id": "A0A287BB63", "database": "UniProtKB", "url": 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"length": 1556, "header": "tr|A0A287BBA7-1|A0A287BBA7_PIG Isoform 1 of Superkiller complex protein 3 OS=Sus scrofa OX=9823 GN=SKIC3 PE=3 SV=1 CANONICAL=A0A287BBA7-1" }, "locus": { "chromosome": "2", "start_pos": 102154543, "end_pos": 102080417, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063761.3", "url": "https://www.ensembl.org/id/ENSSSCT00000063761.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053347.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053347.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 235, "start_aa": "Thr", "end_pos": 235, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr235", "evidence": [ { "id": 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"https://www.uniprot.org/uniprotkb/A0A287BBA7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-429958", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-429958", "resource": "Reactome", "description": "mRNA decay by 3' to 5' exoribonuclease" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "Ski complex", "id": "GO:0055087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055087", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBA7", "url": "https://www.uniprot.org/uniprotkb/A0A287BBA7" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBA7", "url": "https://www.uniprot.org/uniprotkb/A0A287BBA7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, 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1 of GTPase, IMAP family member 6 OS=Sus scrofa OX=9823 GN=GIMAP6 PE=3 SV=3 CANONICAL=A0A287BBD5-1" }, "locus": { "chromosome": "18", "start_pos": 6420956, "end_pos": 6419033, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062610.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062610.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053844.3", "url": "https://www.ensembl.org/id/ENSSSCP00000053844.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBD5", "url": "https://www.uniprot.org/uniprotkb/A0A287BBD5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "GTPase activity", "id": "GO:0003924", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003924", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBD5", "url": "https://www.uniprot.org/uniprotkb/A0A287BBD5" } ], "pmid": "" }, { "name": "GTP binding", "id": "GO:0005525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005525", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBD5", "url": "https://www.uniprot.org/uniprotkb/A0A287BBD5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBD5", "url": "https://www.uniprot.org/uniprotkb/A0A287BBD5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 200, "end_pos": 202, "annotation": "n_glycosylation_sequon" }, { "start_pos": 208, "end_pos": 210, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287BBD5-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 277, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287BBD5-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287BBD5" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287BBD5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BBD5" }, { "id": "PS51720", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51720" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "AIG1-type G", "eco_id": "ECO_0000259", "start_pos": 10, "end_pos": 210, "start_aa": "Pro", "end_aa": "Thr", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 200, "end_pos": 202 }, { "start_pos": 208, "end_pos": 210 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { 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"uniprot_canonical_ac": "A0A287BBK2-1", "uniprot_ac": "A0A287BBK2", "uniprot_id": "A0A287BBK2_PIG", "mass": { "chemical_mass": 71034.0, "monoisotopic_mass": 71034.0 }, "refseq": {}, "gene_names": [ { "name": "SCNN1D", "type": "recommended", "evidence": [ { "id": "A0A287BBK2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK2" } ] } ], "protein_names": [ { "name": "Sodium channel epithelial 1 subunit delta", "type": "synonym", "evidence": [ { "id": "A0A287BBK2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK2/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "This is one of the three pore-forming subunits of the heterotrimeric epithelial sodium channel (ENaC), a critical regulator of sodium balance and fluid homeostasis. ENaC operates in epithelial tissues, where it mediates the electrodiffusion of sodium ions from extracellular fluid through the apical membrane of cells, with water following osmotically. It plays a key role in maintaining sodium homeostasis through electrogenic sodium reabsorption in the kidneys. Additionally, ENaC is essential for airway surface liquid homeostasis, which is crucial for proper mucus clearance.", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBK2", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK2#function" }, { "database": "UniProtKB", "id": "ARBA00049941", "url": "https://www.uniprot.org/uniprotkb/ARBA00049941#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BBK2", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SCNN1D", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK2", "locus": {} } ], "crossref": [ { "id": "ENSSSCG00000027991", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000027991", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR001873", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001873", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004724", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004724", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020903", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020903", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "KPEASHM", "url": "https://omabrowser.org/oma/group/KPEASHM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR11690", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11690", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11690:SF132", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11690:SF132", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00858", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00858", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-2672351", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2672351", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9730628", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9730628", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "34963", "url": "https://www.rhea-db.org/rhea/34963", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287BBK2", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BBK2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGRLWSMSRLGYATSGWGTRLGMEVLQLCGGQGAGGGQTGALLRLISPTQAGASAQAAGGGPGAGRCPQPLPLPPSEEERREGLVELHTSFRELVTFFCTNATIHGTIRLVCSSQNRLKTATWALLLAGALSALYWQFGLLFQQYWRYPVVMAVSVHSERKLFPSVTLCDMNPHRPRPARRHLRALDDFARENIYSLYGFNFTESEEDPGAEALGSEPAFQLDRGIRLQRLSPLGGQNRVGFRLCNRTGGDCVHRAYSSGVTAAQEWYRFHYVNILALLPNAPEDSHRSHGGHLVSSCRYDGQDCQAGHFQTSHHPTYGSCYTFHGIWAAQHPGITHGISLVLRAELQDHLPLLFTEAGIKVLIHRHDQTPFLEHQGFSIRPGTETTIGIREDEVHRLGSPYGHCTHSAGSVDVRLLYKASYTKQACLVSCFQQLMVDTCSCGYYLYPLPAGAEYCSYTRHPAWGHCFYRLYQDLETHRLPCTSRCPRPCRESTYKLTAGVSRWPSSKSADWIPAVLDRPGGRQSPSPRSRLAKVNIFYRELNYRTVDEMPVYSVPQLLSAMGSLWSLWFGSSVLSVLEVLELLLDAMVLTLLLCCRQLHRARGQLGAAPGEPTPSQRPTCCPAAAGMTSNARGPSWPRFP", "length": 641, "header": "tr|A0A287BBK2-1|A0A287BBK2_PIG Isoform 1 of Sodium channel epithelial 1 subunit delta OS=Sus scrofa OX=9823 GN=SCNN1D PE=4 SV=1 CANONICAL=A0A287BBK2-1" }, "isoforms": [ { "isoform_ac": "A0A287BBK2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK2/entry", "sequence": { "sequence": "MGRLWSMSRLGYATSGWGTRLGMEVLQLCGGQGAGGGQTGALLRLISPTQAGASAQAAGGGPGAGRCPQPLPLPPSEEERREGLVELHTSFRELVTFFCTNATIHGTIRLVCSSQNRLKTATWALLLAGALSALYWQFGLLFQQYWRYPVVMAVSVHSERKLFPSVTLCDMNPHRPRPARRHLRALDDFARENIYSLYGFNFTESEEDPGAEALGSEPAFQLDRGIRLQRLSPLGGQNRVGFRLCNRTGGDCVHRAYSSGVTAAQEWYRFHYVNILALLPNAPEDSHRSHGGHLVSSCRYDGQDCQAGHFQTSHHPTYGSCYTFHGIWAAQHPGITHGISLVLRAELQDHLPLLFTEAGIKVLIHRHDQTPFLEHQGFSIRPGTETTIGIREDEVHRLGSPYGHCTHSAGSVDVRLLYKASYTKQACLVSCFQQLMVDTCSCGYYLYPLPAGAEYCSYTRHPAWGHCFYRLYQDLETHRLPCTSRCPRPCRESTYKLTAGVSRWPSSKSADWIPAVLDRPGGRQSPSPRSRLAKVNIFYRELNYRTVDEMPVYSVPQLLSAMGSLWSLWFGSSVLSVLEVLELLLDAMVLTLLLCCRQLHRARGQLGAAPGEPTPSQRPTCCPAAAGMTSNARGPSWPRFP", "length": 641, "header": "tr|A0A287BBK2-1|A0A287BBK2_PIG Isoform 1 of Sodium channel epithelial 1 subunit delta OS=Sus scrofa OX=9823 GN=SCNN1D PE=4 SV=1 CANONICAL=A0A287BBK2-1" }, "locus": { "chromosome": "6", "start_pos": 63578041, "end_pos": 63574240, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053095.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053095.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053455.1", "url": "https://www.ensembl.org/id/ENSSSCP00000053455.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 49, "start_aa": "Thr", "end_pos": 49, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr49", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 614, "start_aa": "Thr", "end_pos": 614, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr614", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBK2", "url": "https://www.uniprot.org/uniprotkb/A0A287BBK2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-2672351", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2672351", "resource": "Reactome", "description": "Stimuli-sensing channels" }, { "id": "R-SSC-9730628", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9730628", "resource": "Reactome", "description": "Sensory perception of salty taste" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Z5Y4-1", "protein_name": "Sodium channel epithelial 1 subunit delta", "gene_name": "SCNN1D", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQEAAREEEERKEGLIEFYDSFKDMFEFFCKNTTIHGTIRLVCSSSNKMKTAFWTLLLLASFGMLYWQFALMFSQYWDYPVVLTMSMHSEPKMFPAITICNLDPYRFDLVSEHLAQLDRMAEKSVTVLYGINTSASLFHVNEKSIHVRDLPSTGNHNGSSFKLSQKFSLLRTTEFNNRTGKRQSLVGFRLCNATGGNCFYKTYSSGMDAILEWYRFHYMNIMSQQPVIINISDHEEKIEDMVYSCQYDGEPCRPSDYVHFHHPVFGSCYTFNSKGTDPFWTATKPGIPYGLSLILRAEQKDHIPLLSTVAGVKVMIHNHNQTPFLEHEGFDIRPGIATTIGIQQDKVNRLGGNYGKCTTDGSDVKVKLLYNSYTLQACLHSCFQHIMVQKCGCGYYYYPLPPGAEYCNYNKQPAWGHCFYQLYSRLRNHHLNCFDQCPKPCRESLYKVSAGTAKWPSRKSQDWIRQALRHQNGYNSTSNRKDIAKVTIYYRQLNYQSVNESPLLSDNLLLSSMGSQWSLWFGSSVLSVVEMLELLIDTLVLCLLFCYQRFRSKTLNVARTPSIPSVSLTLESYRVVQEAGNGTAPAHGHTSGVPMAVANSSDPHPAQLSSKAIPEHCPDVVLNGFRYMKDSSLGGEINH", "length": 640 }, "evidence": [ { "id": "A0A287BBK2", "url": "https://omabrowser.org/oma/group/A0A287BBK2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "P51172-3", "protein_name": "Epithelial sodium channel subunit delta", "gene_name": "SCNN1D", "tax_id": 9606, "organism": "Homo sapiens", 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"database": "UniProtKB", "id": "A0A287BBY0", "url": "https://www.uniprot.org/uniprotkb/A0A287BBY0" } ], "pmid": "" }, { "name": "GTP binding", "id": "GO:0005525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005525", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBY0", "url": "https://www.uniprot.org/uniprotkb/A0A287BBY0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "translation", "id": "GO:0006412", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006412", "evidence": [ { "database": "UniProtKB", "id": "A0A287BBY0", "url": "https://www.uniprot.org/uniprotkb/A0A287BBY0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 51, "end_pos": 53, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287BBY0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 164, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287BBY0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287BBY0" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287BBY0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BBY0" }, { "id": "PF00009", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00009" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Tr-type G", "eco_id": "ECO_0000259", "start_pos": 55, "end_pos": 133, "start_aa": "Pro", "end_aa": "Pro", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 51, "end_pos": 53 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287BC09-1", "uniprot_ac": "A0A287BC09", "uniprot_id": "A0A287BC09_PIG", "mass": { "chemical_mass": 126138.0, "monoisotopic_mass": 126138.0 }, "refseq": { "ac": "XP_020922304", "name": "caskin-2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020922304" }, "gene_names": [ { "name": "CASKIN2", "type": "recommended", "evidence": [ { "id": "A0A287BC09", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BC09" } ] }, { "name": "CASKIN2", "type": "synonym", "evidence": [ { "id": "XP_020922304", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020922304" } ] } ], "protein_names": [ { "name": "Caskin-2", "type": "recommended", "evidence": [ { "id": "A0A287BC09", "database": "UniProtKB", "url": 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Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and governs the methylation and subsequent repression of transposons. Its association with pi-bodies suggests a participation in the primary piRNAs metabolic process. Required prior to the pachytene stage to facilitate the production of multiple types of piRNAs, including those associated with repeats involved in the regulation of retrotransposons. May act by mediating protein-protein interactions during germ cell maturation.", "evidence": [ { "database": "UniProtKB", "id": "A0A287BC09", "url": "https://www.uniprot.org/uniprotkb/A0A287BC09#function" }, { "database": "UniProtKB", "id": "ARBA00025297", "url": "https://www.uniprot.org/uniprotkb/ARBA00025297#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BC09", "url": "https://www.uniprot.org/uniprotkb/A0A287BC09" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CASKIN2", "url": "https://www.uniprot.org/uniprotkb/A0A287BC09", "locus": { "chromosome": "12", "start_pos": 5870554, "end_pos": 5855968, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000040578", "url": "https://www.ensembl.org/id/ENSSSCG00000040578" } ] } } ], 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"https://www.ebi.ac.uk/interpro/entry/IPR035497", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035498", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035498", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035499", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035499", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036028", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036028", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036770", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036770", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:110255968", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110255968", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HIHESHR", "url": "https://omabrowser.org/oma/group/HIHESHR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287BC09", "url": "https://www.orthodb.org/?gene=A0A287BC09", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24174", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24174", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24174:SF18", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24174:SF18", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00536", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00536", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07653", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07653", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12796", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16600", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16600", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16632", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16632", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16907", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16907", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020922304", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020922304", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287BC09", "url": "https://www.uniprot.org/uniprotkb/A0A287BC09", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BC09-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BC09-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGREQDLILAVKNGDVTGVQKLVAKVKAAKTKLLGSTKRLNVNYQDADGFSALHHAALGGSLELIALLLEAQATVDIKDSNGMRPLHYAAWQGRLEPVRLLLRASAAVNAASLDGQIPLHLAAQYGHYEVSEMLLQHQSNPCLVNKAKKTPLDLACEFGRLKVAQLLLNSHLCVALLEGEAKDPCDPNYTTPLHLAAKNGHREVIRQLLRAGIEINRQTKTGTALHEAALYGKTEVVRLLLEGGVDVNIRNTYNQTALDIVNQFTTSQASREIKQLLREASGILKVRALKDFWNLHDPTALNVRAGDVITVLEQHPDGRWKGHIHESQRGTDRVGYFPPGIVEVVSKRVGVLAPRLPSAPTPLRPGVPRMAQPPAHDPLHPLTYGQLPRVGLSPDSPAGDRNSVGSEGSVGSIRSAGSGQSSEGTNGHGPGLLIENAQPLPLAGEDQVLPGLQPPPLADNLNHRPPANFRSGEQLFTQDVRPEQLLEGKDAQAIHNWLSEFQLEGYTAHFLQAGYDVPTISRMTPEDLTAIGVTKPGHRKKIASEIAQLSIAEWLPNYIPADLLEWLCALGLPQYHKQLVSSGYDSMGLVAELTWEELQEIGVNKLGHQKKLMLGVKRLAELRRGLLQGEAPGEGGRQLARGPELMAIEGLENGEGPAAAGPRLLTFQGSELSPELQAAMAGGGPEPLPLPPARSPSQESIGARSRGSGHSQEQPAPQPGGADPNAPQERNLPEGTERPPKLCSPLPGQGAPPYVFMYPQGSPSSPAPGPPPGAPRAFSYLAGPPATPPDPPRPKRRSHSLSRPGPAEGEAEGEAEGPVDSALGSYATLTRRPGRSALVRTSPSPTPTRGAPRSQSFALRARRKGPPPPPPKRLSSVSGPTSEPPLLDGSPGPKEGAPGPRRRTLSEPAGPSEPPGPPAPAGPASDTEEEEPGPEGTPPSRGSSGEGLPFAEEGNLTIKQRPKPAGPPPRETPVPAGLDFNLTESDTVKRRPKCREREPLQTALLAFGVASATPSPATATPLPSQPPSEPPSASPSPSRPDPSSLPAPGAPAPLCPSPPTQPPCPGPALENSQRPGEMEPPAAPAALIKVPGAGTAPKPVSVACTQLAFSGPKLAPRLGPRPVPPPRPESTGASGPGQAQQRLEQTSSSLAAALRAAEKSIGAEEREGPPGTSTKHILDDISTMFDALANQLDAMLD", 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"length": 1197, "header": "tr|A0A287BC09-1|A0A287BC09_PIG Isoform 1 of Caskin-2 OS=Sus scrofa OX=9823 GN=CASKIN2 PE=4 SV=1 CANONICAL=A0A287BC09-1" }, "locus": { "chromosome": "12", "start_pos": 5869516, "end_pos": 5857696, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052806.2", "url": "https://www.ensembl.org/id/ENSSSCT00000052806.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054050.1", "url": "https://www.ensembl.org/id/ENSSSCP00000054050.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1013, "start_aa": "Thr", "end_pos": 1013, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1013", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 787, "start_aa": "Thr", "end_pos": 787, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr787", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": 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Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287BC09", "url": "https://www.uniprot.org/uniprotkb/A0A287BC09" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:110255968", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110255968", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D4A9T0-1", "protein_name": "Caskin-2", "gene_name": "Caskin2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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Might influence the maturation of megakaryocytes via its action as a serpin.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FPE3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FPE3#function" }, { "database": "UniProtKB", "id": "ARBA00057920", "url": "https://www.uniprot.org/uniprotkb/ARBA00057920#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BCD6", "url": "https://www.uniprot.org/uniprotkb/A0A287BCD6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LOC110261637", "url": "https://www.uniprot.org/uniprotkb/A0A287BCD6", "locus": {} } ], "crossref": [ { "id": "A0A287BCD6", "url": "https://alphafold.ebi.ac.uk/entry/A0A287BCD6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000033560", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000033560", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd19956", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd19956", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "110261637", "url": "https://www.ncbi.nlm.nih.gov/gene/110261637", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000215", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000215", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023795", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023795", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023796", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023796", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036186", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036186", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042178", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042178", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042185", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042185", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:110261637", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110261637", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287BCD6", "url": "https://www.orthodb.org/?gene=A0A287BCD6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11461", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11461", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11461:SF186", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11461:SF186", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00079", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00079", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6798695", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798695", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020955205", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020955205", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287BCD6", "url": "https://www.uniprot.org/uniprotkb/A0A287BCD6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BCD6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCD6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QLV8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLV8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QLV8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLV8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F7D6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F7D6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F7D6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F7D6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F9E6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9E6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F9E6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9E6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FFU7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FFU7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FFU7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FFU7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FG61", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FG61", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FG61-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FG61-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FIL0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FIL0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FIL0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FIL0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FPE3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FPE3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FPE3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FPE3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSLSESIIQFAVDLFQQIRRSEGGNIFYSPLSIMSALAMTYLGSRGHTASEIRKALHLKELAENAEGATADLVGRAGTVHRQFQRLLTELNKPTNAYELSVANRLYGDKEVSFSQDYLENVKKFYLASVASVDFVNAAEESRQMINSWVESQTKGKIKDLFPKGTLSSSTTLVLVNAIYFKGRWLQEFKKENTSKEKFWLNKDTSKSVQMMRDTRAFKFASLEHLHVKILEIPYTGQELSMLLLLPDEVDGLQKLEEGLTAEKLLEWTSSQNMKESQVDLHLPRFKVEESYDLKATLIALGMVSAFSADADFSGMTGLAISSVVHKSFVEVTEEGTEAAAATGVVTGITSAPLNNHFHCDHPFLFFIRHNKTNSILFCGRVSSP", "length": 385, "header": "tr|A0A287BCD6-1|A0A287BCD6_PIG Isoform 1 of Serpin domain-containing protein OS=Sus scrofa OX=9823 GN=LOC110261637 PE=3 SV=1 CANONICAL=A0A287BCD6-1" }, "isoforms": [ { "isoform_ac": "A0A287BCD6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCD6/entry", "sequence": { "sequence": "MSSLSESIIQFAVDLFQQIRRSEGGNIFYSPLSIMSALAMTYLGSRGHTASEIRKALHLKELAENAEGATADLVGRAGTVHRQFQRLLTELNKPTNAYELSVANRLYGDKEVSFSQDYLENVKKFYLASVASVDFVNAAEESRQMINSWVESQTKGKIKDLFPKGTLSSSTTLVLVNAIYFKGRWLQEFKKENTSKEKFWLNKDTSKSVQMMRDTRAFKFASLEHLHVKILEIPYTGQELSMLLLLPDEVDGLQKLEEGLTAEKLLEWTSSQNMKESQVDLHLPRFKVEESYDLKATLIALGMVSAFSADADFSGMTGLAISSVVHKSFVEVTEEGTEAAAATGVVTGITSAPLNNHFHCDHPFLFFIRHNKTNSILFCGRVSSP", "length": 385, "header": "tr|A0A287BCD6-1|A0A287BCD6_PIG Isoform 1 of Serpin domain-containing protein OS=Sus scrofa OX=9823 GN=LOC110261637 PE=3 SV=1 CANONICAL=A0A287BCD6-1" }, "locus": { "chromosome": "1", "start_pos": 158088682, "end_pos": 158084054, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042583.2", "url": "https://www.ensembl.org/id/ENSSSCT00000042583.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054191.1", "url": "https://www.ensembl.org/id/ENSSSCP00000054191.1" } ] } }, { "isoform_ac": "A0A5G2QLV8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLV8/entry", "sequence": { "sequence": "MSSLSESIIQFAVDLFQQIRRSEGGNIFYSPLSIMSALAMTYLGSRGHTASEIRKALHLKELAENAEGATADLVGRAGTVHRQFQRLLTELNKPTNAYELSVANRLYGDKEVSFSQDYLENVKKFYLASVASVDFVNAAEESRQMINSWVESQTKGKIKDLFPKGTLSSSTTLVLVNAIYFKGRWLQEFKKENTSKEKFWLNKLEEGLTAEKLLEWTSSQNMKESQVDLHLPRFKVEESYDLKATLIALGMVSAFSADADFSGMTGLAISSVVHKSFVEVTEEGTEAAAATGVVTGITSAPLNNHFHCDHPFLFFIRHNKTNSILFCGRVSSP", "length": 333, "header": "tr|A0A5G2QLV8-1|A0A287BCD6_PIG Computationally mapped isoform of Serpin domain-containing protein OS=Sus scrofa OX=9823 GN=LOC110261637 PE=3 SV=2 CANONICAL=A0A287BCD6-1" }, "locus": { "chromosome": "1", "start_pos": 158088682, "end_pos": 158084054, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075499.2", "url": "https://www.ensembl.org/id/ENSSSCT00000075499.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065567.2", "url": "https://www.ensembl.org/id/ENSSSCP00000065567.2" } ] } }, { "isoform_ac": "A0A8W4F7D6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F7D6/entry", "sequence": { "sequence": "MSSLSESIIQFAVDLFQQIRRSEGGNIFYSPLSIMSALAMTYLGSRGHTASEIRKVGGSFLSFEHLALLSLLVGRAGTVHRQFQRLLTELNKPTNAYELSVANRLYGDKEVSFSQDYLENVKKFYLASVASVDFVNAAEESRQMINSWVESQTKGKIKDLFPKGTLSSSTTLVLVNAIYFKGRWLQEFKKENTSKEKFWLNKVLSISYHLHVKILEIPYTGQELSMLLLLPDEVDGLQKLEEGLTAEKLLEWTSSQNMKESQVDLHLPRFKVEESYDLKATADADFSGMTGLAISSVVHKSFVEVTEEGTEAAAATGVVTGITSAPLNNHFHCDHPFLFFIRHNKTNSILFCGRVSSP", "length": 358, "header": "tr|A0A8W4F7D6-1|A0A287BCD6_PIG Computationally mapped isoform of Serpin domain-containing protein OS=Sus scrofa OX=9823 GN=LOC110261637 PE=3 SV=1 CANONICAL=A0A287BCD6-1" }, "locus": { "chromosome": "1", "start_pos": 158088682, "end_pos": 158084054, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000096162.1", "url": "https://www.ensembl.org/id/ENSSSCT00000096162.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075203.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075203.1" } ] } }, { "isoform_ac": "A0A8W4F9E6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9E6/entry", "sequence": { "sequence": "MSSLSESIIQFAVDLFQQIRRSEGGNIFYSPLSIMSALAMTYLGSRGHTASEIRKVGGSFLSFEHLALLSLLVCFREHASTCKTGKPAGTVHRQFQRLLTELNKPTNAYELSVANRLYGDKEVSFSQDYLENVKKFYLASVASVDFVNAAEESRQMINSWVESQTKGKIKDLFPKGTLSSSTTLVLVNAIYFKGRWLQEFKKENTSKEKFWLNKVLSISYHLHVKILEIPYTGQELSMLLLLPDEVDGLQKGLTAEKLLEWTSSQNMKESQVDLHLPRFKVEESYDLKATADADFSGMTGLAISSVVHKSFVEVTEEGTEAAAATGVVTGITSAPLNNHFHCDHPFLFFIRHNKTNSILFCGRVSSP", "length": 367, "header": "tr|A0A8W4F9E6-1|A0A287BCD6_PIG Computationally mapped isoform of Serpin domain-containing protein OS=Sus scrofa OX=9823 GN=LOC110261637 PE=3 SV=1 CANONICAL=A0A287BCD6-1" }, "locus": { "chromosome": "1", "start_pos": 158088682, "end_pos": 158084054, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000095451.1", "url": "https://www.ensembl.org/id/ENSSSCT00000095451.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075899.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075899.1" } ] } }, { "isoform_ac": "A0A8W4FFU7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FFU7/entry", "sequence": { "sequence": "MSSLSESIIQFAVDLFQQIRRSEGGNIFYSPLSIMSALAMTYLGSRGHTASEIRKVGGTSEGQRLASDSPEVGRAGTVHRQFQRLLTELNKPTNAYELSVANRLYGDKEVSFSQDYLENVKKFYLASVASVDFVNAAEESRQMINSWVESQTKGKIKDLFPKGTLSSSTTLVLVNAIYFKGRWLQEFKKENTSKEKFWLNKVLSISYVQAFKFASLEHLHVKILEIPYTGQELSMLLLLPDEVDGLQKLEEGLTAEKLLEWTSSQNMKESQVDLHLPRFKVEESYDLKATADADFSGMTGLAISSVVHKSFVEVTEEGTEAAAATGVVTGITSAPLNNHFHCDHPFLFFIRHNKTNSILFCGRVSSP", "length": 367, "header": "tr|A0A8W4FFU7-1|A0A287BCD6_PIG Computationally mapped isoform of Serpin domain-containing protein OS=Sus scrofa OX=9823 GN=LOC110261637 PE=3 SV=1 CANONICAL=A0A287BCD6-1" }, "locus": { "chromosome": "1", "start_pos": 158088682, "end_pos": 158084054, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000099110.1", "url": "https://www.ensembl.org/id/ENSSSCT00000099110.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077193.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077193.1" } ] } }, { "isoform_ac": "A0A8W4FG61-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FG61/entry", "sequence": { "sequence": "EVVFPHGDLMLTKFAVDLFQQIRRSEGGNIFYSPLSIMSALAMTYLGSRGHTASEIRKVEQEERITGKSERKDVGRAGTVHRQFQRLLTELNKPTNAYELSVANRLYGDKEVSFSQDYLENVKKFYLASVASVDFVNAAEESRQMINSWVESQTKGKIKDLFPKGTLSSSTTLVLVNAIYFKGRWLQEFKKENTSKEKFWLNKVLSISYVQAFKFASLEHLHVKILEIPYTGQELSMLLLLPDEVDGLQKLEEGLTAEKLLEWTSSQNMKESQVDLHLPRFKVEESYDLKATADADFSGMTGLAISSVVHKSFVEVTEEGTEAAAATGVVTGITSAPLNNHFHCDHPFLFFIRHNKTNSILFCGRVSSP", "length": 369, "header": "tr|A0A8W4FG61-1|A0A287BCD6_PIG Computationally mapped isoform of Serpin domain-containing protein OS=Sus scrofa OX=9823 GN=LOC110261637 PE=3 SV=1 CANONICAL=A0A287BCD6-1" }, "locus": { "chromosome": "1", "start_pos": 158088682, "end_pos": 158083210, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102907.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102907.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077304.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077304.1" } ] } }, { "isoform_ac": "A0A8W4FIL0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FIL0/entry", "sequence": { "sequence": "MLPWEHGRWGWSLFAVDLFQQIRRSEGGNIFYSPLSIMSALAMTYLGSRGHTASEIRKVEQEERITGKSERKDVGRAGTVHRQFQRLLTELNKPTNAYELSVANRLYGDKEVSFSQDYLENVKKFYLASVASVDFVNAAEESRQMINSWVESQTKGKIKDLFPKGTLSSSTTLVLVNAIYFKGRWLQEFKKENTSKEKFWLNKVLSISYHLHVKILEIPYTGQELSMLLLLPDEVDGLQKLEEGLTAEKLLEWTSSQNMKESQVDLHLPRFKVEESYDLKATADADFSGMTGLAISSVVHKSFVEVTEEGTEAAAATGVVTGITSAPLNNHFHCDHPFLFFIRHNKTNSILFCGRVSSP", "length": 359, "header": "tr|A0A8W4FIL0-1|A0A287BCD6_PIG Computationally mapped isoform of Serpin domain-containing protein OS=Sus scrofa OX=9823 GN=LOC110261637 PE=3 SV=1 CANONICAL=A0A287BCD6-1" }, "locus": { "chromosome": "1", "start_pos": 158088682, "end_pos": 158083604, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105162.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105162.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079284.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079284.1" } ] } }, { "isoform_ac": "A0A8W4FPE3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FPE3/entry", "sequence": { "sequence": "MSSLSESIIQFAVDLFQQIRRSEGGNIFYSPLSIMSALAMTYLGSRGHTASEIRKLLHFHGNGMKGFEMAGTVHRQFQRLLTELNKPTNAYELSVANRLYGDKEVSFSQDYLENVKKFYLASVASVDFVNAAEESRQMINSWVESQTKGKIKDLFPKGTLSSSTTLVLVNAIYFKGRWLQEFKKENTSKEKFWLNKVLSISYVQAFKFASLEHLHVKILEIPYTGQELSMLLLLPDEVDGLQKLEEGLTAEKLLEWTSSQNMKESQVDLHLPRFKVEESYDLKATADADFSGMTGLAISSVVHKSFVEVTEEGTEAAAATGVVTGITSAPLNNHFHCDHPFLFFIRHNKTNSILFCGRVSSP", "length": 362, "header": "tr|A0A8W4FPE3-1|A0A287BCD6_PIG Computationally mapped isoform of Serpin domain-containing protein OS=Sus scrofa OX=9823 GN=LOC110261637 PE=3 SV=1 CANONICAL=A0A287BCD6-1" }, "locus": { "chromosome": "1", "start_pos": 158088682, "end_pos": 158084054, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105398.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105398.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080788.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080788.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLV8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLV8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:110261637", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110261637", "resource": "KEGG Pathway" }, { "id": "R-SSC-6798695", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798695", "resource": "Reactome", "description": "Neutrophil degranulation" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "protease binding", "id": "GO:0002020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002020", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCD6", "url": "https://www.uniprot.org/uniprotkb/A0A287BCD6" } ], "pmid": "" }, { "name": "serine-type endopeptidase 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"https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100628161", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100628161", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "GHSCAGP", "url": "https://omabrowser.org/oma/group/GHSCAGP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287BCD8", "url": "https://www.orthodb.org/?gene=A0A287BCD8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24379", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24379", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24379:SF133", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24379:SF133", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003356119", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003356119", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287BCD8", "url": "https://www.uniprot.org/uniprotkb/A0A287BCD8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BCD8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCD8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAARPESPSLSSAGPEPRSPEPPDLVLVPDDGRPATPPSDLVEIQVVKVTDTTLVPEPPEPGSLHCALCPAVFRLVSELLFHEHGHLAGAEGGGQGGDPSRCHVCGRSCPGPASLRAHYSLHTGERPYRCPLCPRAFKALAPLLRHQHRHGVEPGTSQRPPEAAAAREQRPGLAQERSEVVMAAAAAGAAVGKPFACRFCAKPFRRSSDMRDHERVHTGERPYHCGVCGKGFTQSSVLSGHARIHTGERPFRCTLCDRTFNNSSNFRKHQRTHFHGPGPGLGDSGSQPASGAEGPGRGWGAGNTLEEGRGETAQVKVEVDQ", "length": 322, "header": "tr|A0A287BCD8-1|A0A287BCD8_PIG Isoform 1 of Zinc finger protein 784 OS=Sus scrofa OX=9823 GN=ZNF784 PE=3 SV=1 CANONICAL=A0A287BCD8-1" }, "isoforms": [ { "isoform_ac": "A0A287BCD8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCD8/entry", "sequence": { "sequence": "MAAARPESPSLSSAGPEPRSPEPPDLVLVPDDGRPATPPSDLVEIQVVKVTDTTLVPEPPEPGSLHCALCPAVFRLVSELLFHEHGHLAGAEGGGQGGDPSRCHVCGRSCPGPASLRAHYSLHTGERPYRCPLCPRAFKALAPLLRHQHRHGVEPGTSQRPPEAAAAREQRPGLAQERSEVVMAAAAAGAAVGKPFACRFCAKPFRRSSDMRDHERVHTGERPYHCGVCGKGFTQSSVLSGHARIHTGERPFRCTLCDRTFNNSSNFRKHQRTHFHGPGPGLGDSGSQPASGAEGPGRGWGAGNTLEEGRGETAQVKVEVDQ", "length": 322, "header": "tr|A0A287BCD8-1|A0A287BCD8_PIG Isoform 1 of Zinc finger protein 784 OS=Sus scrofa OX=9823 GN=ZNF784 PE=3 SV=1 CANONICAL=A0A287BCD8-1" }, "locus": { "chromosome": "6", "start_pos": 59741329, "end_pos": 59738989, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000057085.3", "url": "https://www.ensembl.org/id/ENSSSCT00000057085.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053754.1", "url": "https://www.ensembl.org/id/ENSSSCP00000053754.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCD8", "url": "https://www.uniprot.org/uniprotkb/A0A287BCD8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100628161", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100628161", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D4A0V8-1", "protein_name": "Zinc finger protein 784", "gene_name": "Zfp865", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "VLVPDGGRPATPPGDLIEIQVVKVTDTTSAPEPPEPGSFHCALCPAAFRLVSELLFHEHGHLAGLEGLGQGGDPSRCHVCGHSCPGPASLRAHYSLHTGERPYRCPLCPRAFKALAPLLRHQHRHGVEPGTPGRLLPTAAAGQPNSRVAQERSEVVMTAAAAGAVVGKPFACRFCAKPFRRSSDMRDHERVHTGERPYHCGICGKGFTQSSVLSGHARIHTGERPFRCMLCDRTFNNSSNFRKHQRTHFHGPGPGVGESGGQLRSSSVSQESRSKCGTENTMEEGCRETKKVNVEVDQ", "length": 298 }, "evidence": [ { "id": "A0A287BCD8", "url": "https://omabrowser.org/oma/group/A0A287BCD8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8BI69-1", "protein_name": "Zinc finger protein 784", "gene_name": "Znf784", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAARPDPPIPSSPTRESPSPEPPDLVLVPDGRPVTPPGDLIEIQVVKVTDTTSVPEPPEPGSFHCALCPAAFRLVSELLFHEHGHLASMEGLGQDGDPSRCHVCGHSCPGPASLRAHYSLHTGERPYRCSLCPRAFKALAPLLRHQHRHGVEPGTSERLLPTTTTGQPNSRVAQERSEVVMAAAAAGAVVGKPFACRFCAKPFRRSSDMRDHERVHTGERPYHCSICGKGFTQSSVLSGHARIHTGERPFRCMLCDRTFNNSSNFRKHQRTHFHGPGSGVGESRGQLRSSSVSQES", "length": 297 }, "evidence": [ { "id": "A0A287BCD8", "url": "https://omabrowser.org/oma/group/A0A287BCD8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8NCA9-1", "protein_name": "Zinc finger protein 784", "gene_name": "ZNF784", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAARPEAQSRSSPTPESRSQEPLDLVLVPDDCRPGTPPSDLIEIQVVKVTDTTLVPEPPEPGSFHCALCPAAFRLVSELLFHEHGHLAGAEGGGQGGDPSRCHVCGHSCPGPASLRAHYSLHTGERPYRCALCPRAFKALAPLLRHQHRHGVEPGTSRRPPDTAAVAEQRPGVAPERAEVVMAAAAAGAAVGKPFACRFCAKPFRRSSDMRDHERVHTGERPYHCGICGKGFTQSSVLSGHARIHTGERPFRCTLCDRTFNNSSNFRKHQRTHFHGPGPGLGDSGGQLGSSAAEGSGSGCGVGDPAEEGRGETAKVKVEADQ", "length": 323 }, 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11339", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11339:SF244", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11339:SF244", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00094", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00094", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01826", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01826", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08742", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08742", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12714", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12714", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287BCE6", "url": "https://www.uniprot.org/uniprotkb/A0A287BCE6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BCE6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCE6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGSLWSWWMLWAGATLLWAMQTQASVATCRAQGDPHYTTFDGRRYDMMGTCLYMAELCGNDETLPAFSVEAKNEHRGSRLVSYVGLATVRAYSHAVSLARGEVGFARIDNQRSRLPVSLAEGRLHVYQSGTQAVVELDFGLVVTYDWDAQLALSLPKRFQDQVCGLCGNYNGDPADDFLTSNWEQTSDAVEFASSWKLDDEDYLCEDGCQNNCPACTPDQTQHYEGSRLCGILTQPNGPFAACHGALDPQPFLKDCVYDLCVVNGERVSLCRGLSAYAQACVELGISVGDWRSPASCPLSCPANSRYQLCAPACPDSCNPTAVPSNCSERPCVEGCVCLPGFVASGGACVSASSCGCTFEGRLLAPGQEVWADKYCQRRCTCDGGTGQVRCSDTQGCPSGERCRVQNGFLGCYPDRFGTCQGSGDPHYVSFDGRRFDFMGTCTYLLAGSCGQATGLPAFRVLVENEHRGSQTVSYTRAVRVEARGVKVVVRREYPGRVLVDDILQYLPFQAADGQVQVFRQGQDAVVRTDFGLTVTYNWNAHVTAKVPGSYSGALCGLCGNFNGDPADDLALRGGGQAANALAFGNSWQEETRPGCGATNPGDCPNLDSLVAQQLQSKKECGILADPNGPFRDCHNTLDPQGVVRDCVYDLCLLPGQSGPLCDALASYAAACQAAEATVYPWRNEELCPLSCPPHSHYEECSYGCPMSCGDLPVLGGCGYNCKEGCVCDEGFVLDGESCVPLASCGCVYQGAYHPPGQTFHPGPGCDSLCHCEEGGLVSCEPSSCGPHEACQPSSGVLGCVAVGSATCQASGDPHYTTFDGRRFDFMGTCVYALARTCGTRPGLAQFAVLQENVAWGNGKVSVTKAITVQVANFTLRLEQNQRKVTVNGVDVRLPVVLANGQVHAFQHGSDVVIETDFGLRVAYDLQYNVRVTVPGNYYQQLCGLCGNYNDNPKDDFQKPDGSQAGSPNEFGNSWEERVPDSPCLPPPTCAPGGDCEPEPECKPELEEKYKQEKFCGLLTSSTGPLAACHKLLDPQGPLQDCVFDLCLGGGNESILCSNIHAYVSACQAAGGQVEPWRTESFCPMPCHPNSHYELCADTCSLGCSALSAPPQCPETCAEGCQCDSGFLNDGKGCVPIQECGCYHNGVYYEPEQTVLIDNCQQQCVCHAGKGMACQDHSCEPGQVCQPSEGVLSCITKDPCHGVTCRPQETCKEKDGQGVCVPNYEATCWLWGDPHYHSFDGWNFDFQGTCNYVLASTSCPGISAQGLTAFTVTTKNENRGNPAVSFVRLVTVTTLNTNISIHKGEIGKVRVNGVLTALPVSEAGGRLSVTHGASKAVLATDFGLQVSYDWDWRVEVTLPSSYHGAVCGLCGNMDRNPSNDQAFPNGTLAPSIPIWGGSWRVPGWDPLCWDECQGSCPTCSEDNLEKYEGPSFCGPLVPGTGGPFADCHAQVAPESFFKGCVLDVCLGGGAQDILCQALAAYAAACQAAGVVIKDWRTQAGCEMSCPDNSHYELCGPPCPASCPSPAPPTTPAPCEGPCAEGCQCNSGFVWSASHCVPLDGGCGCWANGTYHEAGSEFWADATCSQRCQCGPGGGSLVCKPASCGLGEECALLPSGQHGCHPISTVECQAWGDPHYITLDGHRFDFQGSCEYLLSAPCQGPPAGVENFNVTVENEHRGSQAVSYTRTVTLHIYGHSFTLSARWPRQLQVDGKLVALPFQLDTRLHSYVSGPDVVVTTTSGISLAFDGDSNVRLRVPAAYAGALCGLCGNYNQDPKDDLNAVGGNPAGWQVGGAEGCGECVPGPCPEPCTPEQQEPFGGPDACGVISAPDGPLSPCHSLVPPAQYFQACLLDACQAQGHPGGLCPAVAAYVAACQAAGAQLDEWRRPDFCPLQCPAHSHYKLCGDSCPVSCPSLSAPEGCEPTCREGCVCDAGFVLSGDTCVPVGQCGCLHEGRYYPLGEAFYPGPECGRRCECGPGGQVTCQEGAACRPYEECRLQDGVQACYPIGCGRCLANGGTHYITLDGRVYDLHGSCSYILAQVCHPQPGDEDFAIVLEKNAAGDPQRLVVTVADQVVSLAPGPQVTVDGEAVALPVAVGHVRVTAEGRNVILQTTKDLRLLFDGDAHILISIPSPFHGRVCGLCGNFNGNWSDDFVLPSGAVAPSVDAFGAAWRVPGSSQSCSEGCGPAGCPVCLAEETAPYESLNACGRLRDPNGPFSACHAVLGPSEYFRQCVYDLCAHKGNSTFLCRSLAAYTAACQAAGSAVKPWRTDSFCPLQCPAHSHYSVCTRSCQGSCAALSGLTGCTTRCFEGCECDDRYLLSQGICIPVQDCGCSHDGRYLPANSSLLTPDCSKRYSCSSSTGLTCQEVSCPPGRICEIQAGAWDCWVPQGLCSLSVDANLTTFDGARSAVHSPGVYELSHRCPGLREAIPWYRVVADVQPCSGKAEAVGLVHLFFQDGLVTVTRKKGVWVNGLQVSLPAEVLTSVFVHRNPDGSVLVQQKAGVRVRLGTDGQLAVMVSDEHAGMLCGACGNFDADQTNDGLGSQGKATLEDWRAQDFSPW", "length": 2556, "header": "tr|A0A287BCE6-1|A0A287BCE6_PIG Isoform 1 of VWFD domain-containing protein OS=Sus scrofa OX=9823 GN=FCGBP PE=1 SV=3 CANONICAL=A0A287BCE6-1" }, "isoforms": [ { "isoform_ac": "A0A287BCE6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCE6/entry", "sequence": { "sequence": "MGSLWSWWMLWAGATLLWAMQTQASVATCRAQGDPHYTTFDGRRYDMMGTCLYMAELCGNDETLPAFSVEAKNEHRGSRLVSYVGLATVRAYSHAVSLARGEVGFARIDNQRSRLPVSLAEGRLHVYQSGTQAVVELDFGLVVTYDWDAQLALSLPKRFQDQVCGLCGNYNGDPADDFLTSNWEQTSDAVEFASSWKLDDEDYLCEDGCQNNCPACTPDQTQHYEGSRLCGILTQPNGPFAACHGALDPQPFLKDCVYDLCVVNGERVSLCRGLSAYAQACVELGISVGDWRSPASCPLSCPANSRYQLCAPACPDSCNPTAVPSNCSERPCVEGCVCLPGFVASGGACVSASSCGCTFEGRLLAPGQEVWADKYCQRRCTCDGGTGQVRCSDTQGCPSGERCRVQNGFLGCYPDRFGTCQGSGDPHYVSFDGRRFDFMGTCTYLLAGSCGQATGLPAFRVLVENEHRGSQTVSYTRAVRVEARGVKVVVRREYPGRVLVDDILQYLPFQAADGQVQVFRQGQDAVVRTDFGLTVTYNWNAHVTAKVPGSYSGALCGLCGNFNGDPADDLALRGGGQAANALAFGNSWQEETRPGCGATNPGDCPNLDSLVAQQLQSKKECGILADPNGPFRDCHNTLDPQGVVRDCVYDLCLLPGQSGPLCDALASYAAACQAAEATVYPWRNEELCPLSCPPHSHYEECSYGCPMSCGDLPVLGGCGYNCKEGCVCDEGFVLDGESCVPLASCGCVYQGAYHPPGQTFHPGPGCDSLCHCEEGGLVSCEPSSCGPHEACQPSSGVLGCVAVGSATCQASGDPHYTTFDGRRFDFMGTCVYALARTCGTRPGLAQFAVLQENVAWGNGKVSVTKAITVQVANFTLRLEQNQRKVTVNGVDVRLPVVLANGQVHAFQHGSDVVIETDFGLRVAYDLQYNVRVTVPGNYYQQLCGLCGNYNDNPKDDFQKPDGSQAGSPNEFGNSWEERVPDSPCLPPPTCAPGGDCEPEPECKPELEEKYKQEKFCGLLTSSTGPLAACHKLLDPQGPLQDCVFDLCLGGGNESILCSNIHAYVSACQAAGGQVEPWRTESFCPMPCHPNSHYELCADTCSLGCSALSAPPQCPETCAEGCQCDSGFLNDGKGCVPIQECGCYHNGVYYEPEQTVLIDNCQQQCVCHAGKGMACQDHSCEPGQVCQPSEGVLSCITKDPCHGVTCRPQETCKEKDGQGVCVPNYEATCWLWGDPHYHSFDGWNFDFQGTCNYVLASTSCPGISAQGLTAFTVTTKNENRGNPAVSFVRLVTVTTLNTNISIHKGEIGKVRVNGVLTALPVSEAGGRLSVTHGASKAVLATDFGLQVSYDWDWRVEVTLPSSYHGAVCGLCGNMDRNPSNDQAFPNGTLAPSIPIWGGSWRVPGWDPLCWDECQGSCPTCSEDNLEKYEGPSFCGPLVPGTGGPFADCHAQVAPESFFKGCVLDVCLGGGAQDILCQALAAYAAACQAAGVVIKDWRTQAGCEMSCPDNSHYELCGPPCPASCPSPAPPTTPAPCEGPCAEGCQCNSGFVWSASHCVPLDGGCGCWANGTYHEAGSEFWADATCSQRCQCGPGGGSLVCKPASCGLGEECALLPSGQHGCHPISTVECQAWGDPHYITLDGHRFDFQGSCEYLLSAPCQGPPAGVENFNVTVENEHRGSQAVSYTRTVTLHIYGHSFTLSARWPRQLQVDGKLVALPFQLDTRLHSYVSGPDVVVTTTSGISLAFDGDSNVRLRVPAAYAGALCGLCGNYNQDPKDDLNAVGGNPAGWQVGGAEGCGECVPGPCPEPCTPEQQEPFGGPDACGVISAPDGPLSPCHSLVPPAQYFQACLLDACQAQGHPGGLCPAVAAYVAACQAAGAQLDEWRRPDFCPLQCPAHSHYKLCGDSCPVSCPSLSAPEGCEPTCREGCVCDAGFVLSGDTCVPVGQCGCLHEGRYYPLGEAFYPGPECGRRCECGPGGQVTCQEGAACRPYEECRLQDGVQACYPIGCGRCLANGGTHYITLDGRVYDLHGSCSYILAQVCHPQPGDEDFAIVLEKNAAGDPQRLVVTVADQVVSLAPGPQVTVDGEAVALPVAVGHVRVTAEGRNVILQTTKDLRLLFDGDAHILISIPSPFHGRVCGLCGNFNGNWSDDFVLPSGAVAPSVDAFGAAWRVPGSSQSCSEGCGPAGCPVCLAEETAPYESLNACGRLRDPNGPFSACHAVLGPSEYFRQCVYDLCAHKGNSTFLCRSLAAYTAACQAAGSAVKPWRTDSFCPLQCPAHSHYSVCTRSCQGSCAALSGLTGCTTRCFEGCECDDRYLLSQGICIPVQDCGCSHDGRYLPANSSLLTPDCSKRYSCSSSTGLTCQEVSCPPGRICEIQAGAWDCWVPQGLCSLSVDANLTTFDGARSAVHSPGVYELSHRCPGLREAIPWYRVVADVQPCSGKAEAVGLVHLFFQDGLVTVTRKKGVWVNGLQVSLPAEVLTSVFVHRNPDGSVLVQQKAGVRVRLGTDGQLAVMVSDEHAGMLCGACGNFDADQTNDGLGSQGKATLEDWRAQDFSPW", "length": 2556, "header": "tr|A0A287BCE6-1|A0A287BCE6_PIG Isoform 1 of VWFD domain-containing protein OS=Sus scrofa OX=9823 GN=FCGBP PE=1 SV=3 CANONICAL=A0A287BCE6-1" }, "locus": { "chromosome": "6", "start_pos": 48374700, "end_pos": 48332050, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047537.4", "url": "https://www.ensembl.org/id/ENSSSCT00000047537.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041856.3", "url": "https://www.ensembl.org/id/ENSSSCP00000041856.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCE6", "url": "https://www.uniprot.org/uniprotkb/A0A287BCE6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCE6", "url": "https://www.uniprot.org/uniprotkb/A0A287BCE6" } ], "pmid": "" }, { "name": "extracellular matrix", "id": "GO:0031012", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031012", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCE6", "url": "https://www.uniprot.org/uniprotkb/A0A287BCE6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "extracellular matrix structural constituent", "id": "GO:0005201", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005201", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCE6", "url": "https://www.uniprot.org/uniprotkb/A0A287BCE6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1052, "end_pos": 1054, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1298, "end_pos": 1300, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1385, "end_pos": 1387, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1567, "end_pos": 1569, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1668, "end_pos": 1670, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2145, "end_pos": 2147, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2239, "end_pos": 2241, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2339, "end_pos": 2341, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2395, "end_pos": 2397, "annotation": "n_glycosylation_sequon" }, { "start_pos": 326, "end_pos": 328, "annotation": "n_glycosylation_sequon" }, { "start_pos": 873, "end_pos": 875, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287BCE6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BCE6" }, { "id": "PS51233", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51233" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "VWFD", "eco_id": "ECO_0000259", "start_pos": 27, "end_pos": 206, "start_aa": "Ala", "end_aa": "Glu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1052, "end_pos": 1054 }, { "start_pos": 1298, "end_pos": 1300 }, { "start_pos": 1385, "end_pos": 1387 }, { "start_pos": 1567, "end_pos": 1569 }, { "start_pos": 1668, "end_pos": 1670 }, { "start_pos": 2145, "end_pos": 2147 }, { "start_pos": 2239, "end_pos": 2241 }, { "start_pos": 2339, "end_pos": 2341 }, { "start_pos": 2395, "end_pos": 2397 }, { "start_pos": 326, "end_pos": 328 }, { "start_pos": 873, "end_pos": 875 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287BCF7-1", "uniprot_ac": "A0A287BCF7", "uniprot_id": "A0A287BCF7_PIG", "mass": { "chemical_mass": 13927.0, "monoisotopic_mass": 13927.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "Ig-like domain-containing protein", "type": "recommended", "evidence": [ { "id": "A0A287BCF7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BCF7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BCF7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCF7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/A0A287BCF7", "locus": {} } ], "crossref": [ { "id": "A0A287BCF7", "url": "https://alphafold.ebi.ac.uk/entry/A0A287BCF7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000032714", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000032714", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR003598", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003598", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003599", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003599", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013106", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013106", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036179", "database": "InterPro", "categories": [ "Protein Classification" 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"https://alphafold.ebi.ac.uk/entry/A0A287BCI1", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000032786", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000032786", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR026693", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026693", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036388", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036388", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041360", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041360", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057602", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057602", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR47621", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47621", "database": "PANTHER", "categories": [ "Protein 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"MAEPTVCSFLTKVLCAHGGRMFLQDLRGHVELSEARLRDVLRQAGPDRFLLQEVEVREGPWDAEAEVAAGAGGGGGLAWRVVAVSSARVCARYQRGECQACDQLHLCHRHMLGKCPNRDCWSTCTLSHDIHTPVNIQVLKNHGLFGLNEAQLRILLLQNDPCLLPEVCLLYNKGEALYGYCNLKDKCNKFHVCKLFVRGECRLQKCKRSHQLIHSAALKMLQDQGLNISSVVNFQIISTYKHVKLHKMLENKDNSASSAEHSQGLETRGLHRTGAAETSPLVSVPADSAKKPDAGCCEN", "length": 299, "header": "tr|A0A287BCI1-1|A0A287BCI1_PIG Isoform 1 of Zinc finger CCCH-type containing, antiviral 1 like OS=Sus scrofa OX=9823 GN=ZC3HAV1L PE=4 SV=3 CANONICAL=A0A287BCI1-1" }, "isoforms": [ { "isoform_ac": "A0A287BCI1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCI1/entry", "sequence": { "sequence": "MAEPTVCSFLTKVLCAHGGRMFLQDLRGHVELSEARLRDVLRQAGPDRFLLQEVEVREGPWDAEAEVAAGAGGGGGLAWRVVAVSSARVCARYQRGECQACDQLHLCHRHMLGKCPNRDCWSTCTLSHDIHTPVNIQVLKNHGLFGLNEAQLRILLLQNDPCLLPEVCLLYNKGEALYGYCNLKDKCNKFHVCKLFVRGECRLQKCKRSHQLIHSAALKMLQDQGLNISSVVNFQIISTYKHVKLHKMLENKDNSASSAEHSQGLETRGLHRTGAAETSPLVSVPADSAKKPDAGCCEN", "length": 299, "header": "tr|A0A287BCI1-1|A0A287BCI1_PIG Isoform 1 of Zinc finger CCCH-type containing, antiviral 1 like OS=Sus scrofa OX=9823 GN=ZC3HAV1L PE=4 SV=3 CANONICAL=A0A287BCI1-1" }, "locus": { "chromosome": "18", "start_pos": 10610027, "end_pos": 10593184, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062238.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062238.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054039.3", "url": "https://www.ensembl.org/id/ENSSSCP00000054039.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith 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"MWGYLSLLPVLLAIWAIGGLWTVFSVAVANKSVNLTQGFPYISICGNQPPQSCIFSQVLNLGAALATWICILRYHQLRDWGVGKWPNRLILWTGLLSALGTSIVGNFQEKNLRAMHLTGAFFAFFVGTLYFWLQLLFLWRMKSVPRPGAPWIRPLRLGLCSICTILTVAMVVLHIWRMRSVSAALEWTVAMLLFVLFGLFAVDFSGLDGCTLRLRPRSGPLSTPPASPVPLQVSL", "length": 235, "header": "tr|A0A287BCI6-1|A0A287BCI6_PIG Isoform 1 of Transmembrane protein 150B OS=Sus scrofa OX=9823 GN=TMEM150B PE=3 SV=1 CANONICAL=A0A287BCI6-1" }, "isoforms": [ { "isoform_ac": "A0A287BCI6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCI6/entry", "sequence": { "sequence": "MWGYLSLLPVLLAIWAIGGLWTVFSVAVANKSVNLTQGFPYISICGNQPPQSCIFSQVLNLGAALATWICILRYHQLRDWGVGKWPNRLILWTGLLSALGTSIVGNFQEKNLRAMHLTGAFFAFFVGTLYFWLQLLFLWRMKSVPRPGAPWIRPLRLGLCSICTILTVAMVVLHIWRMRSVSAALEWTVAMLLFVLFGLFAVDFSGLDGCTLRLRPRSGPLSTPPASPVPLQVSL", "length": 235, "header": "tr|A0A287BCI6-1|A0A287BCI6_PIG Isoform 1 of Transmembrane protein 150B OS=Sus scrofa OX=9823 GN=TMEM150B PE=3 SV=1 CANONICAL=A0A287BCI6-1" }, "locus": { "chromosome": "6", "start_pos": 59505191, "end_pos": 59499166, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092306.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092306.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074642.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074642.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz 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"https://www.uniprot.org/uniprotkb/A0A287BCN9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSALDGVPFKVPKGFVIHTEPLPGPELSVPACRELLLGSMHDFSLERRTLFWVEAVVRGPCPIQCDAPGAASAPPAWLLLVSPEQGLEPPPAAAKGPEAEPQERPEEEEEEEENQDEEEASSAKEEELDACSPQPSSPESPSLGQHRCSLDMLSGVRSELAAAQRRLSEGRLAARPRDFLHRIGHRALSLCPSPAPPPGSTPPTDPAPSLPSSPALPPRPATAGARPPVRSHKPTVASLNPYICLPPPGQVPQPLAAHRLHPDSADLLSALSQEEQDLIGPVVALGYPLHRAIVALQKTGRQSLSQFLSYLSACDRLLRQGYEEGLVEEAMEMFQFSESQAGEFLRLSEQFSDMGFHKDRIKEVLLVHGNRREQALEELVACAQ", "length": 384, "header": "tr|A0A287BCN9-1|A0A287BCN9_PIG Isoform 1 of Ubiquitin associated protein 1 like OS=Sus scrofa OX=9823 GN=UBAP1L PE=4 SV=3 CANONICAL=A0A287BCN9-1" }, "isoforms": [ { "isoform_ac": "A0A287BCN9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCN9/entry", "sequence": { "sequence": "MSALDGVPFKVPKGFVIHTEPLPGPELSVPACRELLLGSMHDFSLERRTLFWVEAVVRGPCPIQCDAPGAASAPPAWLLLVSPEQGLEPPPAAAKGPEAEPQERPEEEEEEEENQDEEEASSAKEEELDACSPQPSSPESPSLGQHRCSLDMLSGVRSELAAAQRRLSEGRLAARPRDFLHRIGHRALSLCPSPAPPPGSTPPTDPAPSLPSSPALPPRPATAGARPPVRSHKPTVASLNPYICLPPPGQVPQPLAAHRLHPDSADLLSALSQEEQDLIGPVVALGYPLHRAIVALQKTGRQSLSQFLSYLSACDRLLRQGYEEGLVEEAMEMFQFSESQAGEFLRLSEQFSDMGFHKDRIKEVLLVHGNRREQALEELVACAQ", "length": 384, "header": "tr|A0A287BCN9-1|A0A287BCN9_PIG Isoform 1 of Ubiquitin associated protein 1 like OS=Sus scrofa OX=9823 GN=UBAP1L PE=4 SV=3 CANONICAL=A0A287BCN9-1" }, "locus": { "chromosome": "1", "start_pos": 163145762, "end_pos": 163134057, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041328.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041328.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054290.3", "url": "https://www.ensembl.org/id/ENSSSCP00000054290.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 201, "start_aa": "Thr", "end_pos": 201, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr201", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCN9", "url": "https://www.uniprot.org/uniprotkb/A0A287BCN9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "ubiquitin binding", "id": "GO:0043130", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043130", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCN9", "url": "https://www.uniprot.org/uniprotkb/A0A287BCN9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "ESCRT I complex", "id": "GO:0000813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000813", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCN9", "url": "https://www.uniprot.org/uniprotkb/A0A287BCN9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway", "id": "GO:0043162", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043162", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCN9", "url": "https://www.uniprot.org/uniprotkb/A0A287BCN9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287BCN9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 384, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287BCN9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287BCN9" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287BCN9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BCN9" }, { "id": "PS51497", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51497" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "UMA", "eco_id": "ECO_0000259", "start_pos": 4, "end_pos": 50, "start_aa": "Leu", "end_aa": "Leu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 201 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287BCP8-1", "uniprot_ac": "A0A287BCP8", "uniprot_id": "A0A287BCP8_PIG", "mass": { "chemical_mass": 163490.0, "monoisotopic_mass": 163490.0 }, "refseq": { "ac": "XP_020949261", "name": "WD repeat-containing protein 7 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949261" }, "gene_names": [ { "name": "WDR7", "type": "recommended", "evidence": [ { "id": "A0A287BCP8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BCP8" } ] }, { "name": "WDR7", "type": "synonym", "evidence": [ { "id": "XP_020949261", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949261" } ] } ], "protein_names": [ { "name": "WD repeat-containing protein 7", "type": "recommended", "evidence": [ { "id": "A0A287BCP8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BCP8/entry#names_and_taxonomy" } ] }, { "name": "TGF-beta resistance-associated protein TRAG", "type": "synonym", "evidence": [ { "id": "A0A287BCP8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BCP8/entry#names_and_taxonomy" } ] }, { "name": "WD repeat-containing protein 7 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020949261", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949261" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BCP8", "url": "https://www.uniprot.org/uniprotkb/A0A287BCP8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "WDR7", "url": "https://www.uniprot.org/uniprotkb/A0A287BCP8", "locus": { "chromosome": "1", "start_pos": 106411724, "end_pos": 106036029, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004538", "url": "https://www.ensembl.org/id/ENSSSCG00000004538" } ] } } ], "crossref": [ { "id": "ENSSSCG00000004538", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004538", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100512572", "url": "https://www.ncbi.nlm.nih.gov/gene/100512572", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001680", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001680", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015943", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015943", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019775", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019775", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036322", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036322", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049916", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049916", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057848", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057848", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "KQMPPRI", "url": "https://omabrowser.org/oma/group/KQMPPRI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR44099", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44099", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44099:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44099:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00400", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00400", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23123", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23123", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020949261", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949261", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287BCP8", "url": "https://www.uniprot.org/uniprotkb/A0A287BCP8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BCP8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCP8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S1X8", "url": "https://www.uniprot.org/uniprotkb/F1S1X8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S1X8-1", "url": "https://www.uniprot.org/uniprotkb/F1S1X8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L7V0", "url": "https://www.uniprot.org/uniprotkb/I3L7V0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L7V0-1", "url": "https://www.uniprot.org/uniprotkb/I3L7V0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAGNSLVLPIVLWGRKAPTHCISAVLLTDDGATIVTGCHDGQICLWDLSVDLEVNPRALLFGHTASITCLSKACASSDKQYIVSASESGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFSVGNQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISCMSIIRSHRTQEDTVVALSATGILKVWIVTSEISGMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRVFDAGDYSLLCSGPSENGQTWTGGDFVSADKVIIWTENGQSYIYKLPASCLPASDSFRSDVGKAVENLIPPVQHSLLDRTDKELLICPPVTRFFYGCKEYFHKLLIQGDSSGRLNIWNISDTSDKQEGLKMTTSISLQEAFDKLNPCPAGIIDQLSLIPNSNEPLKVTASVYIPAHGRLVCGREDGSIVIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARYDQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPESCSARVQHCICSVASDHSVGLLSLREKKCIMLASRHLFPIHVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMGITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHHKLQTLATNLLASEASDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENLQKASGGSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDDEEEDEEIMRQRREESDPEYRASKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSRGGHMSLMLPGYNQAARKLSHGKAEVGRKLPATEGVGKGTYGVSRAVTTQHLLSIISLANTLMSMTNATFIGDHMKKGPTRPPRPSTPDLSKARGSPPTSSNIVQGQIKQVAAPVVSARSDADHSGSDPASTPALHTCFLVNEGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRCLEVREAAQALLLAELRRIEQAGRKEAIDAWAPYLPQYMDHVISPGVSAEAMQTIPTAPEASGPEAKVQEEEHDLVDDDITTGCLSSVPQMKKISTSYEERRKQATAIVLLGVIGAEFGAEIEPPKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSPKLPPHSTIRRTAIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALSLIATARPPAFITTIAKEVHRHTALAANTQSQQNIHTTTLARAKGEILRVIEILIEKMPTDVVDLLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERNHRIAVGARHGSVALYDIRTGKCQTIHGHKGPITAVAFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSAPQLRCVKTYQVPPVQPASPGSHNALRLARLIWTSNRNVILMAHDGREHRFMV", "length": 1487, "header": "tr|A0A287BCP8-1|A0A287BCP8_PIG Isoform 1 of WD repeat-containing protein 7 OS=Sus scrofa OX=9823 GN=WDR7 PE=1 SV=1 CANONICAL=A0A287BCP8-1" }, "isoforms": [ { "isoform_ac": "A0A287BCP8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCP8/entry", "sequence": { "sequence": "MAGNSLVLPIVLWGRKAPTHCISAVLLTDDGATIVTGCHDGQICLWDLSVDLEVNPRALLFGHTASITCLSKACASSDKQYIVSASESGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFSVGNQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISCMSIIRSHRTQEDTVVALSATGILKVWIVTSEISGMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRVFDAGDYSLLCSGPSENGQTWTGGDFVSADKVIIWTENGQSYIYKLPASCLPASDSFRSDVGKAVENLIPPVQHSLLDRTDKELLICPPVTRFFYGCKEYFHKLLIQGDSSGRLNIWNISDTSDKQEGLKMTTSISLQEAFDKLNPCPAGIIDQLSLIPNSNEPLKVTASVYIPAHGRLVCGREDGSIVIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARYDQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPESCSARVQHCICSVASDHSVGLLSLREKKCIMLASRHLFPIHVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMGITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHHKLQTLATNLLASEASDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENLQKASGGSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDDEEEDEEIMRQRREESDPEYRASKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSRGGHMSLMLPGYNQAARKLSHGKAEVGRKLPATEGVGKGTYGVSRAVTTQHLLSIISLANTLMSMTNATFIGDHMKKGPTRPPRPSTPDLSKARGSPPTSSNIVQGQIKQVAAPVVSARSDADHSGSDPASTPALHTCFLVNEGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRCLEVREAAQALLLAELRRIEQAGRKEAIDAWAPYLPQYMDHVISPGVSAEAMQTIPTAPEASGPEAKVQEEEHDLVDDDITTGCLSSVPQMKKISTSYEERRKQATAIVLLGVIGAEFGAEIEPPKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSPKLPPHSTIRRTAIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALSLIATARPPAFITTIAKEVHRHTALAANTQSQQNIHTTTLARAKGEILRVIEILIEKMPTDVVDLLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERNHRIAVGARHGSVALYDIRTGKCQTIHGHKGPITAVAFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSAPQLRCVKTYQVPPVQPASPGSHNALRLARLIWTSNRNVILMAHDGREHRFMV", "length": 1487, "header": "tr|A0A287BCP8-1|A0A287BCP8_PIG Isoform 1 of WD repeat-containing protein 7 OS=Sus scrofa OX=9823 GN=WDR7 PE=1 SV=1 CANONICAL=A0A287BCP8-1" }, "locus": { "chromosome": "1", "start_pos": 106409045, "end_pos": 106068406, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061734.3", "url": "https://www.ensembl.org/id/ENSSSCT00000061734.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053870.1", "url": "https://www.ensembl.org/id/ENSSSCP00000053870.1" } ] } }, { "isoform_ac": "F1S1X8-1", "url": "https://www.uniprot.org/uniprotkb/F1S1X8/entry", "sequence": { "sequence": "MAGNSLVLPIVLWGRKAPTHCISAVLLTDDGATIVTGCHDGQICLWDLSVDLEVNPRALLFGHTASITCLSKACASSDKQYIVSASESGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFSVGNQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISCMSIIRSHRTQEDTVVALSATGILKVWIVTSEISGMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRVFDAGDYSLLCSGPSENGQTWTGGDFVSADKVIIWTENGQSYIYKLPASCLPASDSFRSDVGKAVENLIPPVQHSLLDRTDKELLICPPVTRFFYGCKEYFHKLLIQGDSSGRLNIWNISDTSDKQEGLKMTTSISLQEAFDKLNPCPAGIIDQLSLIPNSNEPLKVTASVYIPAHGRLVCGREDGSIVIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARYDQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPESCSARVQHCICSVASDHSVGLLSLREKKCIMLASRHLFPIHVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMGITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHHKLQTLATNLLASEASDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENLQKASGGSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDDEEEDEEIMRQRREESDPEYRASKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSRGGHMSLMLPGYNQAARKLSHGKAEVGRKLPATEGVGKGTYGVSRAVTTQHLLSIISLANTLMSMTNATFIGDHMKKGPTRPPRPSTPDLSKARGSPPTSSNIVQGQIKQGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRCLEVREAAQALLLAELRRIEQAGRKEAIDAWAPYLPQYMDHVISPGVSAEAMQTIPTAPEASGPEAKVQEEEHDLVDDDITTGKALTFLLLQPPSPKLPPHSTIRRTAIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALSLIATARPPAFITTIAKEVHRHTALAANTQSQQNIHTTTLARAKGEILRVIEILIEKMPTDVVDLLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERNHRIAVGARHGSVALYDIRTGKCQTIHGHKGPITAVAFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSAPQLRCVKTYQVPPVQPASPGSHNALRLARLIWTSNRNVILMAHDGREHRFMV", "length": 1380, "header": "tr|F1S1X8-1|A0A287BCP8_PIG Computationally mapped isoform of WD repeat-containing protein 7 OS=Sus scrofa OX=9823 GN=WDR7 PE=1 SV=3 CANONICAL=A0A287BCP8-1" }, "locus": { "chromosome": "1", "start_pos": 106409045, "end_pos": 106068406, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005012.4", "url": "https://www.ensembl.org/id/ENSSSCT00000005012.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004892.3", "url": "https://www.ensembl.org/id/ENSSSCP00000004892.3" } ] } }, { "isoform_ac": "I3L7V0-1", "url": "https://www.uniprot.org/uniprotkb/I3L7V0/entry", "sequence": { "sequence": "MAGNSLVLPIVLWGRKAPTHCISAVLLTDDGATIVTGCHDGQICLWDLSVDLEVNPRALLFGHTASITCLSKACASSDKQYIVSASESGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFSVGNQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISCMSIIRSHRTQEDTVVALSATGILKVWIVTSEISGMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRVFDAGDYSLLCSGPSENGQTWTGGDFVSADKVIIWTENGQSYIYKLPASCLPASDSFRSDVGKAVENLIPPVQHSLLDRTDKELLICPPVTRFFYGCKEYFHKLLIQGDSSGRLNIWNISDTSDKQEGLKMTTSISLQEAFDKLNPCPAGIIDQLSLIPNSNEPLKVTASVYIPAHGRLVCGREDGSIVIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARYDQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPESCSARVQHCICSVASDHSVGLLSLREKKCIMLASRHLFPIHVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMGITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHHKLQTLATNLLASEASDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENLQKASGGSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDDEEEDEEIMRQRREESDPEYRASKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSRGGHMSLMLPGYNQAARKLSHGKAEVGRKLPATEGVGKGTYGVSRAVTTQHLLSIISLANTLMSMTNATFIGDHMKKGPTRPPRPSTPDLSKARGSPPTSSNIVQGQIKQGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRCLEVREAAQALLLAELRRIEQAGRKEAIDAWAPYLPQYMDHVISPGVSAEAMQTIPTAPEASGPEAKVQEEEHDLVDDDITTGCLSSVPQMKKISTSYEERRKQATAIVLLGVIGAEFGAEIEPPKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSPKLPPHSTIRRTAIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALSLIATARPPAFITTIAKEVHRHTALAANTQSQQNIHTTTLARAKGEILRVIEILIEKMPTDVVDLLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERNHRIAVGARHGSVALYDIRTGKCQTIHGHKGPITAVAFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSAPQLRCVKTYQVPPVQPASPGSHNALRLARLIWTSNRNVILMAHDGREHRFMV", "length": 1454, "header": "tr|I3L7V0-1|A0A287BCP8_PIG Computationally mapped isoform of WD repeat-containing protein 7 OS=Sus scrofa OX=9823 GN=WDR7 PE=1 SV=2 CANONICAL=A0A287BCP8-1" }, "locus": { "chromosome": "1", "start_pos": 106409045, "end_pos": 106068406, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024820.3", "url": "https://www.ensembl.org/id/ENSSSCT00000024820.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020108.2", "url": "https://www.ensembl.org/id/ENSSSCP00000020108.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L7V0", "url": "https://www.uniprot.org/uniprotkb/I3L7V0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Y4I9-1", "protein_name": "WD repeat-containing protein 7", "gene_name": "WDR7", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSLWYFLKMKFLMKALRCHNKKLEGKRCESRMAGNSLVLPIVLWGQRAPTHCISTLLLMDDTSMIITGCHDGQICLWDIAPDLEINPRALLFGHTASITCLSKASASSEKQYIVSASESGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFMVGTQREGRLLCHGHYPEILVVDATSLEVLYSLLSKISPDWISSMTIIKSNRTQEDTVVAVSVTGILKVWIITSEVNRMQDTTPVFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRVFDAGDYSLLCSVPSENEQTWTGGDFVSADKVIVWTEDGQSFIYKLPASCLPASDLFRRDVGKAVENLIPPLLYSVLDRADKQLLICPPVTRFFYGQREFFSNLLIQGDSSGRLCIWSIPDTLEQQDCAKGLQTTTSISLQEAFDKLTPRPAGIIDQLSLIPNIKEPLKVTASVYIPAHGRLVCGREDGSIVIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKITCLLYPHQVSSRYDQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDHSVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMGITAVEILNACDEALPAAVDSLSHPAVNLKQAMTRRSLAALKNVAHQKLQTLATNLLASEASDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNSALISPENLQKASGGSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDDEDEDEDSVRQRREDTDPEYRSGKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNSVLDELCLDRLGMLKPHCSVSFGLLSRGGHMSLMLPGYNQPVGKPSYDGMELGRKMSITEGLGKGTYGVSRAVTTQHLLSVISLANTLMSMTNATFIGDHMKKGPTRPPRPGTPEMSKMKAPPSMASHAAQGQIKQGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRCLEVREAAQALLLAELRRIEQAGRKETIDAWAPYLPQYIDSVISPGVTTEAIQTATASPDSLGTEAKVQEEEHDLVDDDISAGCLSGLPQLKKISTSYEERRKQATAIVLLGVIGAEFGAEIEPPKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSPKLPAHSTIRRTAIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALSLIATARPPAFITTIAKEVHRHTALAANTQSQQNIHTTTLARAKGEILRVIEILIEKMPTDVVDLLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERSHRIAVGARHGSVALYDIRTGKCQTIHGHKGPITAVAFAPDGRYLATYSNSDSHLSFWQMNTSLLGSIGMLNSAPQLRCIKTYQVPPVQPASPGSHNALRLARLIWTSNRNVILMAHDGKEHRFVV", "length": 1488 }, "evidence": [ { "id": "A0A287BCP8", "url": "https://omabrowser.org/oma/group/A0A287BCP8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q86L37-1", "protein_name": "WD40 repeat-containing protein", "gene_name": "wdr7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSFNLNSSSGSVLNGSGVYNNSNGTYSNGPSPLSVSGGSSSSGMNGSNALLSNSLQSVNGNNSSNYILNKGTEILVPVVLWCGSPSHWITSIIITPDKKTIISGSQSGHIAITSISLDQGKENQFTPKILGIGHENPITCLALGEFERKEVVISAASDGSMSVWSIMDGLCLLSTVSHFLSCSPTQMVSLPNRKQVAVCGKGSNYIYIVDIHSLRIVSTINDHMDWVTSLFSCTMQDSTSMLLSGGLDGIIRFWLLKPGDQDMALQVIDSRNVNGGGSGVDGSYTLDDAPISIKFSPNGKSLLVVTKNNWSIFTTQNSRLLYSIRCPCTTIQEKQAGLPTSGGWFGGSFIDNSMVLIWNKEGRGFLYRIDQTDLKSFPLGDPVPIEGTSPLLSRSYGSSLSSSSNLNNSSFNINNSNSNNNNNNSNGKIGQPDYSIINFTYQSGIPPPQLLITFTSNDNNNSQQTPLLKIGAAMCFGNIFMIGDVYGHIRIWVIPVNSEQLLNPTNQTATTSGKRILREPNLQGSISDGWKSVEQSGKGGKARQQRVTASLLLDDTMMLIRGYEDGSISTSKLPTDLFTKFYNNSHNSRVNYLMSSPPGTGLRRLLFSASNDCTIKVWDLSTFKLLHTFSHHTGPVYSIFSLPQSSRRNTFISISEDKTIGMYSMEDLSCKHMFGVHSSSISKVHWKNEQGYLMVETIDGSVSIWEMGSGELEGVVYGQIAKDILDNSELLSNNWKQQESKIHSGQHFPTKSLVYTHKNDPPIQTLFLNIKSISEDILLITQQKQQQQQQQSQQQQQQQPQSQSQQQQQQQVQQQQQQNIGSSIIQKDLNQLVSIFSYLIPWGMDKALDILYMKDFQLRPPQPDFSFGLLGHGGNMSFLTPSVSFSTGKLQCSETLTAQTTLSAVALGRTILRIGGMENTVSQLTTYYCTTLPETLQGYVYPDFSYLATYCQDGNEDVMISARSIFKISIERMPNTAFKQLVNSFCSVLNADCLGPFERARSIIVLAIIASNRPNSDFNNAFSSRVGIELQKMIYKGTGNLTIIAVELIGKGFSIWKDSIKDLPGLLKCLFTLTMQSDPLATTSKTSLLLIGSVDPKTFIQVIGDEISSENTSTTCRVHGIVLIGSLIKKDPDSVLPFLPRVIDSIIKSLDPHTPVLREACIRQTTAVLHLMVNKYPMVSFHHDTQRLVLGTLDGLVVIYDLKTATRWHRFESFKNSFVSAVTFNESGKMLACYCSLSNEIKIWQASSTFFGLINSSQFTCVRTVSTASEKQTSLGFNSPPTQPLNQNQNNNNNLKQQQSIINNSQPTIPKIENIKLFWSNQNSLVLTKDDTNTITFNIPSN", "length": 1342 }, "evidence": [ { "id": "A0A287BCP8", "url": "https://omabrowser.org/oma/group/A0A287BCP8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q920I9-1", "protein_name": "WD repeat-containing protein 7", "gene_name": "Wdr7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAGNSLVLPIVLWGRKAPTHCISSILLTDDGGTIVTGCHDGQICLWDVSVELEVNPRALLFGHTASITCLSKACASGDKRYTVSASANGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFSVGNQQEGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSQRTQEDTVVALSVTGILKVWIVTSEMSGMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRVFDAGDYSLLCSGPSENGQTWTGGDFVSADKVIIWTENGQSYIYKLPASCLPASDSFRSDVGKAVENLIPPVQHSLLDQKDKELVICPPVTRFFYGCKEYLHKLLIQGDSSGRLNIWNIADIAEKQEADEGLKMTTCISLQEAFDKLKPCPAGIIDQLSVIPNSNEPLKVTASVYIPAHGRLVCGREDGSIIIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARYDQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDHSVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCTDGSVYVWQMDTGALDRCAMGITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHHKLQTLATNLLASEASDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENLQKASGSSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDEEEDEEEARRQSREDSDPEYRASKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSRGGHMSLMLPGYNQAAGKLLHAKAEVGRKLPAAEGVGKGTYTVSRAVTTQHLLSIISLANTLMSMTNATFIGDHMKKGPTRPPRPGTPDLSKARDSPPPSSNIVQGQIKQAAAPVVSARSDADHSGSDSASPALPTCFLVNEGWSQLAAMHCVMLPDLLGLERFRPPLLEMLARRWQDRCLEVREAAQALLLAELRRIEQAGRKETIDTWAPYLPQYMDHVISPGVTAEAMQTMAAAPDASGPEAKVQEEEHDLVDDDITAGCLSSVPQMKKISTSYEERRKQATAIVLLGVIGAEFGAEIEPPKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTYLLLQPPSPKLPPHSTIRRTATDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALSLIATARPPAFITTIAKEVHRHTALAANTQSQQSIHTTTLARAKGEILRVIEILIEKMPTDVVDLLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERSHRIAVGARHGSVALYDIRTGKCQTIHGHKGPITAVSFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSAPQLRCIKTYQVPPVQPASPGSHNALKLARLIWTSNRNVILMAHDGKEHRFMV", "length": 1489 }, "evidence": [ { "id": "A0A287BCP8", "url": "https://omabrowser.org/oma/group/A0A287BCP8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9ERH3-1", "protein_name": "WD repeat-containing protein 7", "gene_name": "Wdr7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGNSLVLPIVLWGRKAPTHCISSILLTDDGGTIVTGCHDGQICLWDLSEELEVNPRALLFGHTAAITCLSKACASGDKQYTVSASANGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFSVGNQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVALSVTGILKVWIVTSEISGLQDTEPIFEEESKPIYCQNCQSLSFCAFTQRSLLVVCSKYWRVFDAGDYSLLCSGPSEDGQTWTGGDFVSADKVIIWTENGQSYIYKLPASCLPASDSFRSDVGKAVENLIPPVQHSLLDQKDRELVICPPVTRFFYGCKEYLHKLLIQGDSSGRLSIWNIADIADKQEANEGLKTTTCISLQDAFDKLKPCPAGIIDQLSVIPNSNEPLKVTASVYIPAHGRLVCGREDGSIIIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARYDQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCVCSVASDHSVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCTDGSVCVWQMDTGALDRCAMGITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHHKLQTLATNLLASEASDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENLQKASGSSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDEEEDEEEVMRQRREESDPEYRASKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSRGGHMSLMLPGYNQAAGKLLQAKAEAGRKGPATESVGKGTYTVSRAVTTQHLLSIISLANTLMSMTNATFIGDHMKKGPTRPPRPGTPDLSKARDSPPASSNIVQGQIKQAAAPVSARSAADHSGSASASPALRTCFLVNEGWSQLAAMHCVMLPDLLGLGKFRPPLLEMLARRWQDRCLEVREAAQALLLAELRRIEQAGRKETIDTWAPYLPQYMDHVISPGVTAEAMQTMAAAPDASGPEAKVQEEEHDLVDDDITTGCLSSVPQMKKMSTSYEERRKQATAIVLLGVIGAEFGAEIEPPKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSPKLPPHSTIRRTAIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALSLIATARPPAFITTIAKEVHRHTALAANTQSQQSIHTTTLARAKGEILRVIEILIEKMPTDVVDLLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERSHRIAVGARHGSVALYDIRTGKCQTIHGHKGPITAVSFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSAPQLRCIKTYQVPPVQPASPGSHNALRLARLIWTSNRNVILMAHDGKEHRFMV", "length": 1488 }, "evidence": [ { "id": "A0A287BCP8", "url": "https://omabrowser.org/oma/group/A0A287BCP8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9W543-1", "protein_name": "Rabconnectin-3B, isoform B", "gene_name": "Rbcn-3B", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MVSTNLVVPVVLWGPTAPTHCISSVFLSDDQFTLVTGCYDGQICLWQVEPTTLKMSPRCLLVGHSAPVLCLVRASLLPENNFLVSSSENGEMCTWDLTDGKCMEAVKLPQVHTQIQSYHTANSEDVRLFCIGYYAEIMVMDPFSLEVIYVLSSKVKPDWISAIHVLRPMRRKDDVVLAITTTGTVKVWTLTGNENKHAEPIYENESKEIRCLNAITMNCCAQNQRTVLLVCTKYWQIYDAGDFTVLCSVIAPARERWQGGDFITSDRVMLWTDEGKGYLYKLPANCIPDNKEFHSKSVVRDAPYLYYVLQHAGDKVLSCPPAMKLLQGAGGQHNLLRGDSEGYISVWNVPEVPLDNISILQAKQMPPRPLKPHVCTSLVEAWSIMDPPPVGILDQLSRITESPVKLTSSIYLPQQSRLVIGREDGSIVIVPATQTVMMQLLVGIKQNFSDWPSHQILYGHRGRVNCLLCPSMIHSRYEKSHLLSGGIDFAVCLWDLYSGSLLHRFCVHAGEITQLLVPPESCSPRILKCICSVASDHSVTLVSLQERKCVTLASRHLFPVVTIKWRPLDDFLIVGCSDGSVYVWQMETGHLDRVLHGMLAEEVLSACDEQAEDGGSGGGGGSNGASASEMGMANPAVHFFRGLKSRNMNAIRHATQRGITQLQQLQGHNQGNFDFLMKHRSNPLVIQGLRTNPKDAESHILFFDIEGLIFELHSEEYAQMTPATLESLGVHLQNPKDGKSMHLDASKKIGDFFNKVKNKAVDVEKILKDKDKHGLVQKFKEKTEIVEKKVQAKVESLQKAVEPHEEQQDLKSKIASKMEVTHVMEVAQLLLSLLHSWGLDPHLDKMCETRLGLLRPIVPISYGVLSKAGYMSLLLPTWQNNYAIPPGIQLPSSSKKRPLPEELQRLEHLTAVFTSRLHWELSTTLTTNHILALVAMSNTLLSMSAASFLPDSEKHKKLQRLAQRTDSTLSNEEEREELMAHHISQIKHAWSLLATHHCFLLPDKIEALEPKKFKRPQVEMMVKRWQHHCIEIREAAQQILLGELTRMGKKGRKQLVESWAQYLPLYTHTEPIVGAQQQLALISQPASGGAGSGSGGNGGVGVGVSGGGGAGSGSGPGGSVPGGDAHQDEDYEEEEEEIIRKPSSLSELKRKQTTAVILLGVIGAEFGQDISQESPNHRGSISMATGANLTSGVAGGERRKSSVVEGFGIANNLARLTSMALAHLLYAPPSPKLPQYTPLRRAAIDLLGRGFTVWEPYLDVSKVLLGLLEISCEGKAVPNLNYKLPLTPQADACRTARHALRLIATARPAAFITTMAREVARYNTMQQNAQSINTPLTQSVLHKAKGEILQCVEMLIDKMQSEIAGLLVEVMDIALHCVDGNELKNRGLAELCPAICKFNQISHCAQTRRIAVGANSGNLAIYELRQNKCQMIPAHTHPITSLAFSPDGKYLVSYSCAENRLSFWQTSTGMFGLGQSQTRCTKGYSTAPIPDVSRLNPMRLAKLVWINNRTVTLMLADGSETRFNV", "length": 1525 }, "evidence": [ { "id": "A0A287BCP8", "url": "https://omabrowser.org/oma/group/A0A287BCP8/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y4E6-1", "protein_name": "WD repeat-containing protein 7", "gene_name": "WDR7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAGNSLVLPIVLWGRKAPTHCISAVLLTDDGATIVTGCHDGQICLWDLSVELQINPRALLFGHTASITCLSKACASSDKQYIVSASESGEMCLWDVSDGRCIEFTKLACTHTGIQFYQFSVGNQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVALSVTGILKVWIVTSEISDMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRVFDAGDYSLLCSGPSENGQTWTGGDFVSSDKVIIWTENGQSYIYKLPASCLPASDSFRSDVGKAVENLIPPVQHILLDRKDKELLICPPVTRFFYGCREYFHKLLIQGDSSGRLNIWNISDTADKQGSEEGLAMTTSISLQEAFDKLNPCPAGIIDQLSVIPNSNEPLKVTASVYIPAHGRLVCGREDGSIVIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARYDQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDHSVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMGITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHHKLQTLATNLLASEASDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENLQKASGSSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDDEEEDEEIMRQRREESDPEYRSSKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSRGGHMSLMLPGYNQPACKLSHGKTEVGRKLPASEGVGKGTYGVSRAVTTQHLLSIISLANTLMSMTNATFIGDHMKKGPTRPPRPSTPDLSKARGSPPTSSNIVQGQIKQVAAPVVSARSDADHSGSDPPSAPALHTCFLVNEGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRCLEVREAAQALLLAELRRIEQAGRKEAIDAWAPYLPQYIDHVISPGVTSEAAQTITTAPDASGPEAKVQEEEHDLVDDDITTGCLSSVPQMKKISTSYEERRKQATAIVLLGVIGAEFGAEIEPPKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSPKLPPHSTIRRTAIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALSLIATARPPAFITTIAKEVHRHTALAANTQSQQNMHTTTLARAKGEILRVIEILIEKMPTDVVDLLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERNHRIAVGARHGSVALYDIRTGKCQTIHGHKGPITAVAFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSAPQLRCIKTYQVPPVQPASPGSHNALKLARLIWTSNRNVILMAHDGKEHRFMV", "length": 1490 }, "evidence": [ { "id": "A0A287BCP8", "url": "https://omabrowser.org/oma/group/A0A287BCP8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A287BCP8", "url": "https://www.uniprot.org/uniprotkb/A0A287BCP8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1165, "end_pos": 1167, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1235, "end_pos": 1237, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1422, "end_pos": 1424, "annotation": "n_glycosylation_sequon" }, { "start_pos": 357, "end_pos": 359, "annotation": "n_glycosylation_sequon" }, { "start_pos": 679, "end_pos": 681, "annotation": "n_glycosylation_sequon" }, { "start_pos": 791, "end_pos": 793, "annotation": "n_glycosylation_sequon" }, { "start_pos": 903, "end_pos": 905, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287BCP8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BCP8" }, { "id": "PF23123", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23123" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "WDR72-like alpha-solenoid", "eco_id": "ECO_0000259", "start_pos": 1011, "end_pos": 1046, "start_aa": "Arg", "end_aa": "Ala", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1165, "end_pos": 1167 }, { "start_pos": 1235, "end_pos": 1237 }, { "start_pos": 1422, "end_pos": 1424 }, { "start_pos": 357, "end_pos": 359 }, { "start_pos": 679, "end_pos": 681 }, { "start_pos": 791, "end_pos": 793 }, { "start_pos": 903, "end_pos": 905 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287BCQ2-1", "uniprot_ac": "A0A287BCQ2", "uniprot_id": "A0A287BCQ2_PIG", "mass": { "chemical_mass": 18231.0, "monoisotopic_mass": 18231.0 }, "refseq": { "ac": "XP_020950675", "name": "transmembrane protein 238", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020950675" }, "gene_names": [ { "name": "TMEM238", "type": "recommended", "evidence": [ { "id": "A0A287BCQ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BCQ2" } ] }, { "name": "TMEM238", "type": "synonym", "evidence": [ { "id": "XP_020950675", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020950675" } ] } ], "protein_names": [ { "name": "Transmembrane protein 238", "type": "synonym", "evidence": [ { "id": "A0A287BCQ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BCQ2/entry#names_and_taxonomy" } ] }, { "name": "transmembrane protein 238", "type": "synonym", "evidence": [ { "id": "XP_020950675", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020950675" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BCQ2", "url": "https://www.uniprot.org/uniprotkb/A0A287BCQ2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TMEM238", "url": "https://www.uniprot.org/uniprotkb/A0A287BCQ2", "locus": { "chromosome": "6", "start_pos": 59554323, "end_pos": 59554859, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000035417", "url": "https://www.ensembl.org/id/ENSSSCG00000035417" } ] } } ], "crossref": [ { "id": "A0A287BCQ2", "url": "https://alphafold.ebi.ac.uk/entry/A0A287BCQ2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000035417", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000035417", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "110261058", "url": "https://www.ncbi.nlm.nih.gov/gene/110261058", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR029365", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029365", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:110261058", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110261058", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FYGRCAI", "url": "https://omabrowser.org/oma/group/FYGRCAI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287BCQ2", "url": "https://www.orthodb.org/?gene=A0A287BCQ2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR28613", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28613", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR28613:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28613:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15125", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15125", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020950675", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020950675", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287BCQ2", "url": "https://www.uniprot.org/uniprotkb/A0A287BCQ2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BCQ2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCQ2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAAPAVGASQGAPPGAPFPPAGAPVPSSGLGRCRMALLLAVALDVAGMAALLTGVFAQLQVRGRDFGDLLIYSGALLVFLSLLGWILWYTGNIEISRQELERDYGLRPSALARLARKLSRRWSAPASSAAGRRAAPGSRGARRAARTPPPPAAGSRRVRLQLATLEAGPGAAGAGTE", "length": 178, "header": "tr|A0A287BCQ2-1|A0A287BCQ2_PIG Isoform 1 of Transmembrane protein 238 OS=Sus scrofa OX=9823 GN=TMEM238 PE=4 SV=1 CANONICAL=A0A287BCQ2-1" }, "isoforms": [ { "isoform_ac": "A0A287BCQ2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCQ2/entry", "sequence": { "sequence": "MAAAPAVGASQGAPPGAPFPPAGAPVPSSGLGRCRMALLLAVALDVAGMAALLTGVFAQLQVRGRDFGDLLIYSGALLVFLSLLGWILWYTGNIEISRQELERDYGLRPSALARLARKLSRRWSAPASSAAGRRAAPGSRGARRAARTPPPPAAGSRRVRLQLATLEAGPGAAGAGTE", "length": 178, "header": "tr|A0A287BCQ2-1|A0A287BCQ2_PIG Isoform 1 of Transmembrane protein 238 OS=Sus scrofa OX=9823 GN=TMEM238 PE=4 SV=1 CANONICAL=A0A287BCQ2-1" }, "locus": { "chromosome": "6", "start_pos": 59554859, "end_pos": 59554326, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043355.1", "url": "https://www.ensembl.org/id/ENSSSCT00000043355.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054305.1", "url": "https://www.ensembl.org/id/ENSSSCP00000054305.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., 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38631912, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065226.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065226.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054371.1", "url": "https://www.ensembl.org/id/ENSSSCP00000054371.1" } ] } }, { "isoform_ac": "A0A5G2RAT4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RAT4/entry", "sequence": { "sequence": "MILKKKLSCFWTLGLCLVASKSSPKVPSITDPTFIDQAVKAHNEMRGKVWPTAANMKHMSWDEALAKTAKAWANKCLFGHNPCLPKSLQCHPTFQYIGENIWLGPLRIFTPRCAVEAWYNESQFYDFNSLSCSKVCGHYTQVVWANSYKIGCAVAICPNLGGPNTAIFVCDYGPAGNYPNMHPYANGSSCSMCEEGEICTKKLCQNKDLDKLQSYPNWNPEGIAPQLAACSPLYLLSVLLRIF", "length": 243, "header": "tr|A0A5G2RAT4-1|A0A287BCV9_PIG Computationally mapped isoform of GLIPR1 like 1 OS=Sus scrofa OX=9823 GN=GLIPR1L1 PE=1 SV=1 CANONICAL=A0A287BCV9-1" }, "locus": { "chromosome": "5", "start_pos": 38664066, "end_pos": 38631912, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": 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"id": "ENSSSCP00000026341.2", "url": "https://www.ensembl.org/id/ENSSSCP00000026341.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 52, "start_aa": "Thr", "end_pos": 52, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr52", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LQG1", "url": "https://www.uniprot.org/uniprotkb/I3LQG1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A1W2P7V2-1", "protein_name": "GLI pathogenesis-related 1 like 3", "gene_name": "Glipr1l3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287BD45", "url": "https://www.uniprot.org/uniprotkb/A0A287BD45" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100627014", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627014", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0XG32-1", "protein_name": "Transmembrane p24 trafficking protein family member 8", "gene_name": "TMED8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSDVLAAAAGSRFEPPAAGALGGFSGPELSSENEAAAQRTEPAEQRGDGSERSASPCGSQIGSPVSADTTEDSKEGSCTVEDQKVAEAEEKLPDQIQSTKEEALARMTKYHIHQGAGDIVMIQSDHTGAVDILSAELETADLLGEQRKAQPPPLAPPTTWTTGKMKEFKAKMGKEKSAKMVVKRGEVVTVRVPTHPDGKRVCWEFATDDYDIGFGVYFDWTTVTSTAITVQVSESSDEEDEEEEEEIEGLAPVGDVERGSKSYLRNRYGEIMPVYRRDSHREVQAGSHEYPGEGIYLLKFDNSYSLLRNKTLFFHVFYTS", "length": 320 }, "evidence": [ { "id": "A0A287BD45", "url": "https://omabrowser.org/oma/group/A0A287BD45/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q3UHI4-1", "protein_name": "Protein TMED8", "gene_name": "Tmed8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDRQAAEGPAFWSPAARRGSAGGVGDRRGVEESQAAASEKEDLESTNVSSPLASASDPAAESSPYRPQMVSPASKDTTEDLQNVAGASEGQAPGEQAALPAGQTQVLSEMAKYQAPQRPEDTVMIQSEHTGAIDVLSADLESADLLGDHRKVSPPLMAPPCVWTFAKVKEFKSKLGKEKNSRLVVKRGEVVTIRVPTHPEGKRVCWEFATDDYDIGFGVYFDWTPVTSTDITVQVSDSSEDEEEEEDEEEEIEEPVPVGDVERGSRSSLRGRYGEVMPVYRRDSHRDVQAGSHDYPGEGIYLLKFDNSYSLLRNKTLYFHIYYTS", "length": 326 }, "evidence": [ { "id": "A0A287BD45", "url": "https://omabrowser.org/oma/group/A0A287BD45/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6PL24-1", "protein_name": "Protein TMED8", "gene_name": "TMED8", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSDLQAAEGPGSWSPTARPGSAGGVGDCQGVEGSQAAASENEDLENKDTSLLASATDPEPCSSPHRPQMVSPVSKDATEDLRKATGPLEAQALVKQDLLPADQAQVLNEMAKYQVPQRSGDIVMIQSEHTGAIDVLSADLESADLLGDHRKVSPPLMAPPCIWTFAKVKEFKSKLGKEKNSRLVVKRGEVVTIRVPTHPEGKRVCWEFATDDYDIGFGVYFDWTPVTSTDITVQVSDSSDDEDEEEEEEEEIEEPVPAGDVERGSRSSLRGRYGEVMPVYRRDSHRDVQAGSHDYPGEGIYLLKFDNSYSLLRNKTLYFHIYYTS", "length": 325 }, "evidence": [ { "id": "A0A287BD45", "url": "https://omabrowser.org/oma/group/A0A287BD45/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 315, "end_pos": 317, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287BD45", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BD45" }, { "id": "PS50866", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50866" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "GOLD", "eco_id": "ECO_0000259", "start_pos": 160, "end_pos": 324, "start_aa": "Pro", "end_aa": "Tyr", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 315, "end_pos": 317 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": 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"table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287BD47-1", "uniprot_ac": "A0A287BD47", "uniprot_id": "A0A287BD47_PIG", "mass": { "chemical_mass": 180293.0, "monoisotopic_mass": 180293.0 }, "refseq": { "ac": "XP_020946065", "name": "maestro heat-like 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"https://www.ebi.ac.uk/interpro/entry/IPR011989", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR021133", "url": "https://www.ebi.ac.uk/interpro/entry/IPR021133", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045206", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045206", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048465", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048465", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055406", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055406", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055408", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055408", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056282", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056282", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR23120", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23120", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23120:SF44", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23120:SF44", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF21047", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21047", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23210", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23210", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23221", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23221", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23227", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23227", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020946065", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020946065", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287BD47", "url": "https://www.uniprot.org/uniprotkb/A0A287BD47", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BD47-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BD47-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RSL4", "url": "https://www.uniprot.org/uniprotkb/F1RSL4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RSL4-1", "url": "https://www.uniprot.org/uniprotkb/F1RSL4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSESHVQRLSTILLDAITDKDPLVQEQVCGALCALGESRPEEVLLACAEHLRQHEKLAHPYRTMILRAVETVVSSRIGELDKDVARTIILLASGEMTRAKELVCDWQQAASNVLVALGKRFVGKVMEEMLSKFQPGLLPHYFVVQTLANLSVSNVFGTVPFLTSILSTMLPMLSLAKHDSMRVVFCFALQRFSESTLEYLANLDQAPDPTVRKDAFATDTLSAYDILFHQWLQSREAKLRLAVVEALGPMSHLLPSEKLEEQLPKLLPGVLALYKKHAETVHTSKSLAQILEAAVSVGSRTLEVQLDSVLAALHAQVCVPVESSSPLVMSNQKEVLRCFTVLACCSPDRLLAFLLPKLDSSSERTRVGTLQVLRHLINAAAAQMEVKKPFILSSMKLPLLDTNSKVKRAVVQVISAMAHHGYLEQPGGEAMMEYVVQQCALPPESEPQKPCADSENLPADGVRAISISTLYLVSTTVDRMSDVLWPYLLEFLVPVRFTRALTPLCRSLVHLAQKRQEQDAGAFLIQYNGNVTLPSPYAITTRLLVVSSKPYLGDGRGAASLRLLSVLHRNIHPELGQRWATTIPLLLEHLDEYTEETLPQKEWEEKLLMFLRDTLAAVADNTWICQLSLEMCRQLPNYNETPQEKNFLYKCIGTTLGAASHKEVVRKHLQELLETARYQEETEREGLACCFGICAISHLDDTLAQLEDFVKSDVFRKSTGIFNIFKDRSENEADKVRSALVLCYGHVAARAPRELVQPRVESDIFRNMSQCFSTKDPTLRLSLVRSVCMASQAICGSAQGSAFHFSRKAELVVQMTEFIKAEPPDSLRTPIRKKAMLACTYLASLEPALEEQVQAELVHSCLHSVLAVLPEPTVEDGRQESLYLDTMQALKDLLTSLLQRDMTSQGLQRMVEHLSPWIKSPRGHERVRALGLSACLLQYFLEHLHVSAVVPFHNLGLLIGLFSPRCADLWPATRQEAVSCVYCLLYLQLGYEGFSRDYRDDVAEQLLALKDGLVHPDPAALFHSCHSIAQVIAKRLPPDQLISLLLTLFEGLGDPDKDCSRAATVMINCLLKERGHLLLEKVPELVSVLRAKLQETREEHVLQAAQHSVYLLASQHHAAVVSSLLGSPLPFDSHTGTLWRALAVEPGLTAQVLGLLLEKLSRDVPFKEGRAFLLSTTPDRVATLLPLAATCALYEVTSVPASGPAVLELYPQLFAALLLRVSCTVGVQLPRNLQAKERRSSGSSLGFRSLEPCSSAVDALQAVLLRGGNEDVVQRMELEGGWELLRTSAGHEEGVARLASAMAKFAGPRLPLVTKALFSTQSSVYDIQRVTSTAFLAELLSSNVVRDLMLLESLLDNLAARQKDSCASVRRLVLRGLANVATGSPDKVRAHGPQLLTAMIGGLDDGDAAHSLVALEAMVGLARLLDLVEAWDLRSVLLHVAIRIRPFFDSEKMEFRAASIRLFGHLNKACRGDCEDVFLEQVVGGLAPLLLHLRDPQAPVTAACRFALRMCGPNLECEELAAVFQKHLQEGRSLHFGEFLNTTCKHLMHHFPDLLGRLVSTSLFYFKSSWEDVRAAAPMLTGFLVLHVEAEHRPQVDLEQLLAALQLLLKDPAPAVRAKAAETLGRLVKFA", 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"field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287BDC3-1", "uniprot_ac": "A0A287BDC3", "uniprot_id": "A0A287BDC3_PIG", "mass": { "chemical_mass": 58017.0, "monoisotopic_mass": 58017.0 }, "refseq": { "ac": "XP_005671034", "name": "piggyBac transposable element-derived protein 5 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005671034" }, "gene_names": [ { "name": "PGBD5", "type": "recommended", "evidence": [ { "id": "A0A287BDC3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BDC3" } ] }, { "name": "PGBD5", "type": "synonym", "evidence": [ { "id": "XP_005671034", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005671034" } ] } ], "protein_names": [ { "name": "PiggyBac transposable element derived 5", "type": "synonym", "evidence": [ { "id": "A0A287BDC3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BDC3/entry#names_and_taxonomy" } ] }, { "name": "piggyBac transposable element-derived protein 5 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_005671034", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005671034" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BDC3", "url": "https://www.uniprot.org/uniprotkb/A0A287BDC3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PGBD5", "url": "https://www.uniprot.org/uniprotkb/A0A287BDC3", "locus": { "chromosome": "14", "start_pos": 59935021, "end_pos": 59842468, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000021027", "url": "https://www.ensembl.org/id/ENSSSCG00000021027" } ] } } ], "crossref": [ { "id": "ENSSSCG00000021027", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000021027", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "102161608", "url": "https://www.ncbi.nlm.nih.gov/gene/102161608", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR029526", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029526", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042423", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042423", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:102161608", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102161608", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "IMTQSRF", "url": "https://omabrowser.org/oma/group/IMTQSRF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR28576", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28576", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR28576:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28576:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13843", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13843", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005671034", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005671034", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287BDC3", "url": "https://www.uniprot.org/uniprotkb/A0A287BDC3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BDC3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BDC3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAEGGGGARKRAPALLEAARARYESLHISDDVFGESGPDSGGNPFYSTSAASHSSSAASSDDEPERPGPAAPPPGAPDAPDLEEDEAGAGWSATLRDRPPPRFEDTGGPTRKMPPSASAMDFFQLFVPDNVLKNMVVQTNMYARKFQERFGSDGAWVDVTLPEMKAFLGYVISTSTSHCESVLSIWSGGFYSNRSLALVMSQARFEKILKYFHVVAFRSSQTTHGLYKVQPFLDSLQTSFDSAFRPSQTQVLHEPLIDEDPVFIATCTERELRKRKKRKFSLWVRQCSSTGFIIQIYVHLKEGSGPDGLDALKNKPQLHGMVAKNLCRNAAGKNYIIFTGPSITSLTLFEEFEKQEIYCCGLLSSRKSDCTGLPPSMLSNPATPPARGQHQIRMKGSMSLICWYNKGHFRFLTNAYSPMQQGVIIKRRSGEIPCPLAVEAFAAHLSYICKYDDKYSKYFISHKPNKTWQQVFWFAISIAINNAYILYKMSDAYHVKRYSRAQFGERLVRELLGLEDASPAH", "length": 521, "header": "tr|A0A287BDC3-1|A0A287BDC3_PIG Isoform 1 of PiggyBac transposable element derived 5 OS=Sus scrofa OX=9823 GN=PGBD5 PE=4 SV=1 CANONICAL=A0A287BDC3-1" }, "isoforms": [ { "isoform_ac": "A0A287BDC3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BDC3/entry", "sequence": { "sequence": "MAEGGGGARKRAPALLEAARARYESLHISDDVFGESGPDSGGNPFYSTSAASHSSSAASSDDEPERPGPAAPPPGAPDAPDLEEDEAGAGWSATLRDRPPPRFEDTGGPTRKMPPSASAMDFFQLFVPDNVLKNMVVQTNMYARKFQERFGSDGAWVDVTLPEMKAFLGYVISTSTSHCESVLSIWSGGFYSNRSLALVMSQARFEKILKYFHVVAFRSSQTTHGLYKVQPFLDSLQTSFDSAFRPSQTQVLHEPLIDEDPVFIATCTERELRKRKKRKFSLWVRQCSSTGFIIQIYVHLKEGSGPDGLDALKNKPQLHGMVAKNLCRNAAGKNYIIFTGPSITSLTLFEEFEKQEIYCCGLLSSRKSDCTGLPPSMLSNPATPPARGQHQIRMKGSMSLICWYNKGHFRFLTNAYSPMQQGVIIKRRSGEIPCPLAVEAFAAHLSYICKYDDKYSKYFISHKPNKTWQQVFWFAISIAINNAYILYKMSDAYHVKRYSRAQFGERLVRELLGLEDASPAH", "length": 521, "header": "tr|A0A287BDC3-1|A0A287BDC3_PIG Isoform 1 of PiggyBac transposable element derived 5 OS=Sus scrofa OX=9823 GN=PGBD5 PE=4 SV=1 CANONICAL=A0A287BDC3-1" }, "locus": { "chromosome": "14", "start_pos": 59933385, "end_pos": 59842667, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049260.3", "url": "https://www.ensembl.org/id/ENSSSCT00000049260.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054092.1", "url": "https://www.ensembl.org/id/ENSSSCP00000054092.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 383, "start_aa": "Thr", "end_pos": 383, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr383", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287BDC3", "url": "https://www.uniprot.org/uniprotkb/A0A287BDC3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:102161608", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102161608", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A1D5P057-1", "protein_name": "PiggyBac transposable element derived 5", "gene_name": "PGBD5", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MWYLEMLSWLLPPMSLHTHRGGWCGREREAGLSPGGGGAHPSACLPAAVPEPLLLLGCCLRPQDPAEPARGERGRLLAAAEMMAEGGGGPARRKALSLLEAARSRYESLQISDDVFGESGQDSSGNPFYSTSADSRSAASSQDEEDDDEGEGRPEGPCPRSRAARRRVPRPAPATAERRRQQQRQTGGGGAMPGGPGPMEEGEEEDAETGGWTRSLRDVPPPRFKDSSGPTRKMPLTASAMDFFQLFVPDNVLKNMVVQTNMYAKKYQERFGSDDTWIDVTLTEMKAFLGYMISTSIHHCESVLSIWSSGFYSNKSIALIMTQSRFEKILKYFHIVAFRSSQTTHGLYKIQPFLDSLQNGFDSAFRPSQAQVLHEPLIDEDPVFIATCTERELRKRKKRKFSLWVRQCSSTGFICQIYVHLKEGSGADGLDALKNKPQLHSMVAKSLCQNASGKNYIIFTGPSITSLNLFEEFEKQEIYCCGLLSARKSDCTGLPPSMLNNPDTPQSRGQYRIRMKGNMSLICWYNKGHFRFLTNAYSPVQQGVIIKRKSGEIPCPLAVEAFAAHLSYICKYDDKYSKYFISHKPNKTWQQVFWFAISIAINNAYILYKMSEAYHVTRYSRAQFGERLVKELLGLEDTSPSH", "length": 642 }, "evidence": [ { "id": "A0A287BDC3", "url": "https://omabrowser.org/oma/group/A0A287BDC3/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D3YZI9-1", "protein_name": "PiggyBac transposable element-derived protein 5", "gene_name": "Pgbd5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAEGGGGSRRRAPALLEAARARYESLHISDDVFGESGPDSGGNPFYSTSAASRSSSAASSDDERERPAPPGTAPPSYAADPLELEEDETGGGWSAVLRDRPSPRFEDTGGPTRKMPPSASAVDFFQLFVPDNVLKNMVVQTNMYARKFQERFGSDGAWVEVTLAEMKAFLGYVISTSVSHCESVLSIWSGGFYSNRSLALVMSQARFEKILKYFHVVAFRSSQTTHGLYKVQPFLDSLQSGFDAAFRPSQTQVLHEPLIDEDPVFIATCTERELRKRKKRKFSLWVRQCSSTGFIIQIYVHLKEGGGPDGLDALKNKPQLHSMVARSLCRNAAGKNYIIFTGPSITSLNLFEEFEKQGIYCCGLLSSRKSDCTGLPPSMLTNPATPLARGQHQIRTKGNMSLICWYNKGHFRFLTNAYSPVQKGVIIKRRSGEIPCPLAVEAFAAHLSYICRYDDKYSKYFISHKPNKTWQQVFWFAISIAVNNAYILYKMSDAYHVKKYSRAQFGERLVRELLGLEDSSPAH", "length": 523 }, "evidence": [ { "id": "A0A287BDC3", "url": "https://omabrowser.org/oma/group/A0A287BDC3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3ZSZ4-1", "protein_name": "PiggyBac transposable element derived 5", "gene_name": "Pgbd5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEGGGGARKRAPALLEAARARYESLHISDDVFGESGPDSGGNPFYSTSAASRSSSAASSDDERERPAPPGTAPPPHAADPLELEEDETGGGWSTVLRDRPPPRFEDTGGPTRKMPPSASAVDFFQLFVPDNVLKNMVVQTNMYARKFQERFGSDGAWVEVTLAEMKAFLGYVISTSVSHCESVLSIWSGGFYSNRSLALVMSQARFEKILKYFHVVAFRSSQTTHGLYKVQPFLDSLQSGFDAAFRPSQTQVLHEPLIDEDPVFIATCTERELRKRKKRKFSLWVRQCSSTGFIIQIYVHLKEGGGPDGLDALKNKPQLHSMVARSLCRNAAGKNYIIFTGPSITSLTLFEEFEKQGIYCCGLLSSRKSDCTGLPPSMLTNPATPLARGQHQIRTKGNMSLICWYNKGHFRFLTNAYSPVQQGVIIKRRSGEIPCPLAVEAFAAHLSYICRYDDKYSKYFISHKPNKTWQQVFWFAISIAVNNAYILYKMSDAYHVKRYSRAQFGERLVRELLGLEDESPAH", "length": 523 }, "evidence": [ { "id": "A0A287BDC3", "url": "https://omabrowser.org/oma/group/A0A287BDC3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6ZM83-1", "protein_name": "PiggyBac transposable element-derived protein 5", "gene_name": "pgbd5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAECGRRGLSLLEEARSRYESLQISDDVFGESGDDSSENPFYSTTGDSNSDNYPETNADDARVNETRSQSCVPPGSVSSGQAQEEGWGDTLRDLSLPHYQDTHGPTQKMSATATAMDFFQLFVPDNVIQNMVTQTNMYAKKFQERFGSDEGWTNVTLAEMKAFLGYVTSTSVNRCESVLSIWSSGFFSNRSIALKMSQARFEKILKYFHVVAFRSSQGGSQGLYKIQPFLDSLQQSFSSSFRPSQTQVLHEPLIDEDPVFITTCTERELRKRKKRKFSLWVRQCSSTGFICQIYVHLKEGPGPDGLDTLKNKPQLHSLVAKQLCQNLAGRNAIIFTGPSITSLNLFQEFEKQGIYCCGLLSIRKSDCTGLPQSMLINTEAPQQRGQSHVKMRGNMSIINWYNKGNFRFLTNAYSPTKEGVIIKRKSGEIPCPLAVEAFAAHLSYICKYDDKYSKYFIFHKPNKTWQQVFWLTISIAINNAYILYKMSDAYHVKRYSRAQFGERLVKELLDMDDCSPTQ", "length": 518 }, "evidence": [ { "id": "A0A287BDC3", "url": "https://omabrowser.org/oma/group/A0A287BDC3/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8N414-1", "protein_name": "PiggyBac transposable element-derived protein 5", "gene_name": "PGBD5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAEGGGGARRRAPALLEAARARYESLHISDDVFGESGPDSGGNPFYSTSAASRSSSAASSDDEREPPGPPGAAPPPPRAPDAQEPEEDEAGAGWSAALRDRPPPRFEDTGGPTRKMPPSASAVDFFQLFVPDNVLKNMVVQTNMYAKKFQERFGSDGAWVEVTLTEMKAFLGYMISTSISHCESVLSIWSGGFYSNRSLALVMSQARFEKILKYFHVVAFRSSQTTHGLYKVQPFLDSLQNSFDSAFRPSQTQVLHEPLIDEDPVFIATCTERELRKRKKRKFSLWVRQCSSTGFIIQIYVHLKEGGGPDGLDALKNKPQLHSMVARSLCRNAAGKNYIIFTGPSITSLTLFEEFEKQGIYCCGLLRARKSDCTGLPLSMLTNPATPPARGQYQIKMKGNMSLICWYNKGHFRFLTNAYSPVQQGVIIKRKSGEIPCPLAVEAFAAHLSYICRYDDKYSKYFISHKPNKTWQQVFWFAISIAINNAYILYKMSDAYHVKRYSRAQFGERLVRELLGLEDASPTH", "length": 524 }, "evidence": [ { "id": "A0A287BDC3", "url": "https://omabrowser.org/oma/group/A0A287BDC3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A287BDC3", "url": "https://www.uniprot.org/uniprotkb/A0A287BDC3" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A287BDC3", "url": "https://www.uniprot.org/uniprotkb/A0A287BDC3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "transposase activity", "id": "GO:0004803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004803", "evidence": [ { "database": "UniProtKB", "id": "A0A287BDC3", "url": "https://www.uniprot.org/uniprotkb/A0A287BDC3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "non-replicative DNA transposition", "id": "GO:0098038", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098038", "evidence": [ { "database": "UniProtKB", "id": "A0A287BDC3", "url": "https://www.uniprot.org/uniprotkb/A0A287BDC3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 193, 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mapped isoform of Ankyrin repeat domain 55 OS=Sus scrofa OX=9823 GN=ANKRD55 PE=4 SV=2 CANONICAL=A0A287BDD4-1" }, "locus": { "chromosome": "16", "start_pos": 35330382, "end_pos": 35232039, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079122.2", "url": "https://www.ensembl.org/id/ENSSSCT00000079122.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070334.2", "url": "https://www.ensembl.org/id/ENSSSCP00000070334.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken 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"tr|A0A287BDL6-1|A0A287BDL6_PIG Isoform 1 of Tropomyosin 3 OS=Sus scrofa OX=9823 GN=TPM3 PE=1 SV=2 CANONICAL=A0A287BDL6-1" }, "locus": { "chromosome": "4", "start_pos": 95562643, "end_pos": 95542555, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040499.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040499.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054617.2", "url": "https://www.ensembl.org/id/ENSSSCP00000054617.2" } ] } }, { "isoform_ac": "A0A4X1VV89-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV89/entry", "sequence": { "sequence": "MEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDLNEM", "length": 284, "header": "tr|A0A4X1VV89-1|A0A287BDL6_PIG Computationally mapped isoform of Tropomyosin 3 OS=Sus scrofa OX=9823 GN=TPM3 PE=1 SV=1 CANONICAL=A0A287BDL6-1" }, "locus": { "chromosome": "4", "start_pos": 95571672, "end_pos": 95542558, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058770.3", "url": "https://www.ensembl.org/id/ENSSSCT00000058770.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043653.1", "url": "https://www.ensembl.org/id/ENSSSCP00000043653.1" } ] } }, { "isoform_ac": "A0A4X1W0H8-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W0H8/entry", "sequence": { "sequence": "MAGITTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI", "length": 248, "header": "tr|A0A4X1W0H8-1|A0A287BDL6_PIG Computationally mapped isoform of Tropomyosin 3 OS=Sus scrofa OX=9823 GN=TPM3 PE=1 SV=1 CANONICAL=A0A287BDL6-1" }, "locus": { "chromosome": "4", "start_pos": 95571593, "end_pos": 95549877, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007182.5", "url": "https://www.ensembl.org/id/ENSSSCT00000007182.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000006989.4", "url": "https://www.ensembl.org/id/ENSSSCP00000006989.4" } ] } }, { "isoform_ac": "A0A4X1W2B1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2B1/entry", "sequence": { "sequence": "MAGITTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDLNEM", "length": 227, "header": "tr|A0A4X1W2B1-1|A0A287BDL6_PIG Computationally mapped isoform of Tropomyosin 3 OS=Sus scrofa OX=9823 GN=TPM3 PE=1 SV=1 CANONICAL=A0A287BDL6-1" }, "locus": { "chromosome": "4", "start_pos": 95571672, "end_pos": 95549877, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007183.4", "url": "https://www.ensembl.org/id/ENSSSCT00000007183.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000006990.4", "url": "https://www.ensembl.org/id/ENSSSCP00000006990.4" } ] } }, { "isoform_ac": "A0A5G2RA93-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RA93/entry", "sequence": { "sequence": "MAGITTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELLVGGDYLCESFLSPKPLILFLLQYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSM", "length": 243, "header": "tr|A0A5G2RA93-1|A0A287BDL6_PIG Computationally mapped isoform of Tropomyosin 3 OS=Sus scrofa OX=9823 GN=TPM3 PE=1 SV=1 CANONICAL=A0A287BDL6-1" }, "locus": { "chromosome": "4", "start_pos": 95561904, "end_pos": 95549877, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069440.2", "url": "https://www.ensembl.org/id/ENSSSCT00000069440.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067532.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067532.1" } ] } }, { "isoform_ac": "A0A5G2RD45-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RD45/entry", "sequence": { "sequence": "MAGITTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEERLYSQLERNRLLSNELKLTLHDLCD", "length": 247, "header": "tr|A0A5G2RD45-1|A0A287BDL6_PIG Computationally mapped isoform of Tropomyosin 3 OS=Sus scrofa OX=9823 GN=TPM3 PE=1 SV=2 CANONICAL=A0A287BDL6-1" }, "locus": { "chromosome": "4", "start_pos": 95570326, "end_pos": 95549877, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072117.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072117.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072253.2", "url": "https://www.ensembl.org/id/ENSSSCP00000072253.2" } ] } }, { "isoform_ac": "A0A5G2RJ89-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RJ89/entry", "sequence": { "sequence": "KMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDLNEM", "length": 285, "header": "tr|A0A5G2RJ89-1|A0A287BDL6_PIG Computationally mapped isoform of Tropomyosin 3 OS=Sus scrofa OX=9823 GN=TPM3 PE=1 SV=1 CANONICAL=A0A287BDL6-1" }, "locus": { "chromosome": "4", "start_pos": 95571672, "end_pos": 95542555, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090472.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090472.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071864.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071864.1" } ] } }, { "isoform_ac": "A0A8W4F9Q6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9Q6/entry", "sequence": { "sequence": "KMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI", "length": 285, "header": "tr|A0A8W4F9Q6-1|A0A287BDL6_PIG Computationally mapped isoform of Tropomyosin 3 OS=Sus scrofa OX=9823 GN=TPM3 PE=1 SV=1 CANONICAL=A0A287BDL6-1" }, "locus": { "chromosome": "4", "start_pos": 95562643, "end_pos": 95542555, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000094740.1", "url": "https://www.ensembl.org/id/ENSSSCT00000094740.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075567.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075567.1" } ] } }, { "isoform_ac": "A0A8W4FKL1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FKL1/entry", "sequence": { "sequence": "MEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKVGAGLSKVTGFGAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSM", "length": 275, "header": "tr|A0A8W4FKL1-1|A0A287BDL6_PIG Computationally mapped isoform of Tropomyosin 3 OS=Sus scrofa OX=9823 GN=TPM3 PE=1 SV=1 CANONICAL=A0A287BDL6-1" }, "locus": { "chromosome": "4", "start_pos": 95561904, "end_pos": 95542558, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092468.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092468.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079442.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079442.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VV89", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VV89" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI", "length": 285 }, "evidence": [ { "id": "A0A287BDL6", "url": "https://omabrowser.org/oma/group/A0A287BDL6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P21107-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "Tpm3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMEAIKKKMQMLKLDKENVLDRAEQAEAEQKQAEERSKQLEDELATMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISDELDHALNDMTSI", "length": 285 }, "evidence": [ { "id": "A0A287BDL6", "url": "https://omabrowser.org/oma/group/A0A287BDL6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5KR47-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI", "length": 284 }, "evidence": [ { "id": "A0A287BDL6", "url": "https://omabrowser.org/oma/group/A0A287BDL6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q63610-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "Tpm3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGSTTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDLNEM", "length": 248 }, "evidence": [ { "id": "A0A287BDL6", "url": "https://omabrowser.org/oma/group/A0A287BDL6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "actin filament", "id": "GO:0005884", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005884", "evidence": [ { "database": "UniProtKB", "id": "A0A287BDL6", "url": "https://www.uniprot.org/uniprotkb/A0A287BDL6" } ], "pmid": "" }, { "name": "cytoskeleton", "id": "GO:0005856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005856", "evidence": [ { "database": "UniProtKB", "id": "A0A287BDL6", "url": "https://www.uniprot.org/uniprotkb/A0A287BDL6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "muscle contraction", "id": "GO:0006936", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006936", "evidence": [ { "database": "UniProtKB", "id": "A0A287BDL6", "url": "https://www.uniprot.org/uniprotkb/A0A287BDL6" } ], "pmid": "" }, { "name": "actin filament organization", "id": "GO:0007015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007015", "evidence": [ { "database": "UniProtKB", "id": "A0A287BDL6", "url": "https://www.uniprot.org/uniprotkb/A0A287BDL6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "actin filament binding", "id": "GO:0051015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051015", "evidence": [ { "database": "UniProtKB", "id": "A0A287BDL6", "url": "https://www.uniprot.org/uniprotkb/A0A287BDL6" } ], "pmid": "" }, { "name": "actin binding", "id": "GO:0003779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003779", "evidence": [ { "database": "UniProtKB", "id": "A0A287BDL6", "url": "https://www.uniprot.org/uniprotkb/A0A287BDL6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287BDL6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 285, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287BDL6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287BDL6" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287BDL9-1", "uniprot_ac": "A0A287BDL9", "uniprot_id": "A0A287BDL9_PIG", "mass": { "chemical_mass": 43080.0, "monoisotopic_mass": 43080.0 }, "refseq": { "ac": "XP_020923859", "name": "leucine-rich repeat-containing protein 2 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020923859" }, "gene_names": [ { "name": "LRRC2", "type": "recommended", "evidence": [ { "id": "A0A287BDL9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BDL9" } ] }, { "name": "LRRC2", "type": "synonym", "evidence": [ { "id": "XP_020923859", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020923859" } ] } ], "protein_names": [ { "name": "Leucine rich repeat containing 2", "type": "synonym", "evidence": [ { "id": "A0A287BDL9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BDL9/entry#names_and_taxonomy" } ] }, { "name": "leucine-rich repeat-containing protein 2 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020923859", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020923859" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BDL9", "url": "https://www.uniprot.org/uniprotkb/A0A287BDL9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LRRC2", "url": "https://www.uniprot.org/uniprotkb/A0A287BDL9", "locus": { "chromosome": "13", "start_pos": 29478114, "end_pos": 29536539, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000026945", "url": "https://www.ensembl.org/id/ENSSSCG00000026945" } ] } } ], "crossref": [ { "id": "ENSSSCG00000026945", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000026945", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100151747", "url": "https://www.ncbi.nlm.nih.gov/gene/100151747", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001611", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001611", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003591", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003591", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050216", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050216", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PIDNTQC", "url": "https://omabrowser.org/oma/group/PIDNTQC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287BDL9", "url": "https://www.orthodb.org/?gene=A0A287BDL9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR48051", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48051", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR48051:SF16", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48051:SF16", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13855", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13855", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF27680", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF27680", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020923859", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020923859", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287BDL9", "url": "https://www.uniprot.org/uniprotkb/A0A287BDL9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BDL9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BDL9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LG42", "url": "https://www.uniprot.org/uniprotkb/I3LG42", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LG42-1", "url": "https://www.uniprot.org/uniprotkb/I3LG42-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGHKVVVFDISVVRALWETRVKKHKAWQKKEAERLEKSALEKIKEEWNFVAECRRKGIPQAVYCKNGFVDTSVRLLDKIERNSLARQSSLSKEGHKWSSEFVFELFGEHWKEFPDSLKEQTHLKEWHISNTLIQIIPTYIELFQAMRILDLPKNQISRLPAEIGRLKNLKELNVSFNYLKSIPPELGDCENLEKLDCSGNLELTELPFELSNLKQASFVDISANKFSSVPICVLRMSNLQWLDISNNNLNDLPQDIDRLEELQTFLLYKNKLTYLPYALLNLKKLTLLVVSGDHLVELPTALCDSSTPLKFISLMDNPIENTQCQDGDELVESERDRQHFDKEFMKAYIEDLKERESVPSYTTKVSFSLQL", "length": 371, "header": "tr|A0A287BDL9-1|A0A287BDL9_PIG Isoform 1 of Leucine rich repeat containing 2 OS=Sus scrofa OX=9823 GN=LRRC2 PE=4 SV=1 CANONICAL=A0A287BDL9-1" }, "isoforms": [ { "isoform_ac": "A0A287BDL9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BDL9/entry", "sequence": { "sequence": "MGHKVVVFDISVVRALWETRVKKHKAWQKKEAERLEKSALEKIKEEWNFVAECRRKGIPQAVYCKNGFVDTSVRLLDKIERNSLARQSSLSKEGHKWSSEFVFELFGEHWKEFPDSLKEQTHLKEWHISNTLIQIIPTYIELFQAMRILDLPKNQISRLPAEIGRLKNLKELNVSFNYLKSIPPELGDCENLEKLDCSGNLELTELPFELSNLKQASFVDISANKFSSVPICVLRMSNLQWLDISNNNLNDLPQDIDRLEELQTFLLYKNKLTYLPYALLNLKKLTLLVVSGDHLVELPTALCDSSTPLKFISLMDNPIENTQCQDGDELVESERDRQHFDKEFMKAYIEDLKERESVPSYTTKVSFSLQL", "length": 371, "header": "tr|A0A287BDL9-1|A0A287BDL9_PIG Isoform 1 of Leucine rich repeat containing 2 OS=Sus scrofa OX=9823 GN=LRRC2 PE=4 SV=1 CANONICAL=A0A287BDL9-1" }, "locus": { "chromosome": "13", "start_pos": 29509356, "end_pos": 29480102, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047472.3", "url": "https://www.ensembl.org/id/ENSSSCT00000047472.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054424.1", "url": "https://www.ensembl.org/id/ENSSSCP00000054424.1" } ] } }, { "isoform_ac": "I3LG42-1", "url": "https://www.uniprot.org/uniprotkb/I3LG42/entry", "sequence": { "sequence": "MGHKVVVFDISVVRALWETRVKKHKAWQKKEAERLEKSALEKIKEEWNFVAECRRKGIPQAVYCKNGFVDTSVRLLDKIERNSLARQSSLSKEGHKWSSEFVFELFGEHWKEFPDSLKEQTHLKEWHISNTLIQIIPTYIELFQAMRILDLPKNQISRLPAEIGRLKNLKELNVSFNYLKSIPPELGDCENLEKLDCSGNLELTELPFELSNLKQASFVDISANKFSSVPICVLRMSNLQWLDISNNNLNDLPQDIDRLEELQTFLLYKNKLTYLPYALLNLKKLTLLVVSGDHLVELPTALCDSSTPLKICSQLYHQSVFQPSALKPSIGRLWNLPNLWSYKSLGCGSCQRGIMNGLGLKTKSRNQGHS", "length": 370, "header": "tr|I3LG42-1|A0A287BDL9_PIG Computationally mapped isoform of Leucine rich repeat containing 2 OS=Sus scrofa OX=9823 GN=LRRC2 PE=4 SV=2 CANONICAL=A0A287BDL9-1" }, "locus": { "chromosome": "13", "start_pos": 29509356, "end_pos": 29479968, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026965.2", "url": "https://www.ensembl.org/id/ENSSSCT00000026965.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023035.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023035.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LG42", "url": "https://www.uniprot.org/uniprotkb/I3LG42" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2LAH7-1", "protein_name": "Leucine-rich repeat-containing protein 2", "gene_name": "Lrrc2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGHKVVVFDISVVRALWETRVKKHKAWQKKEAERLEKSALEKIKEEWDFVAECRRKGVPQAQYCKNGFVDTNSRILDKIERNSVARQSSWVKDRGKQSNPFVFELSGAQWKELPDSLKEQTHLKEWHIHSTLIQTIPAYIELFQAMRILDLPENQITCLPAEIGRLKNLKELNVSFNHLRSIPPELGDCENLERLDCSGNLDLMELPFELSNLKQVTFVDISANNFSSVPICVLRMCRLQWLDISSNNLSDLPQDIDRLEELQSFLLYKNKLTYLPQAMLNLKKLTLLVVSGDHLVELPTALCDASTPLKFVSLMDNPIDKAQCQDSDETIESEQDRQHFDKEFMKAYIEDLKEREAVPSYTTKVSFSLQL", "length": 371 }, "evidence": [ { "id": "A0A287BDL9", "url": "https://omabrowser.org/oma/group/A0A287BDL9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0ABK0L536-1", "protein_name": "Leucine-rich repeat-containing protein 2", "gene_name": "Lrrc2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGHKVVVFDISVVRALWETRVKKHKAWQKKEAERLEKSALEKIKEEWEFVAECRRKGVPQAEYCKNGFVDTSTRLLERIERNSVARQSARVKDRGKRSNPFVFELSGTQWKELPDSLKEQTHLKEWHIHNTLIQIIPTYIELFHSMKILDLPKNQITCLPPEIGRLKNLKELNVSFNHLKSIPPELGDCENLERLDCSGNLDLMELPFELSNLKQVTFVDISANKFSSVPICVLRMCRLQWLDISSNDLTDLPQDIDRLEELQGFLLYKNKLTYLPQAMLNLKKLTLLVVSGDDLVELPTALCDASTPLKFVSLLDNPIDKTRCQDTDDTVESEQDRQHFDKEFMKAYIEDLKERAVPSYTAKVSFSLQL", "length": 370 }, "evidence": [ { "id": "A0A287BDL9", "url": "https://omabrowser.org/oma/group/A0A287BDL9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1NW31-1", "protein_name": "Leucine rich repeat containing 2", "gene_name": "LRRC2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGHQVIIFDFSLIRGLWEARVKKNKERQKKEKERLEKSSLEKIKQEWNFILECRKKGIPQSKYLKNGFVDIDEKILDMCEKAPQLQKRITLSDETNKETNKFIFQLSGEQWMEFPESLKDHTYLKEWHVSNTLIQTIPNYIALFQDLRVLELSKNQINHLPVEIGHLKNLKVLNVSFNNLKSVPPELGDCENLEKLDLSGNMEISELPFELSNLKQVTVVDVSANNFHSIPVCVLRMSNLQWLDISSNNLRDLPEDIDRLDQLQTLLLQKNKLTYLPRALVNMSKLSLLVVSGDDLVEIPTAVCESTTGLKFISLKDSPVETIVCEDTEEIIESEREREQFEKEFMKAYIEDLRERDSAPSYTTKVLFSLQL", "length": 372 }, "evidence": [ { "id": "A0A287BDL9", "url": "https://omabrowser.org/oma/group/A0A287BDL9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q8VDB8-1", "protein_name": "Leucine-rich repeat-containing protein 2", "gene_name": "Lrrc2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGHKVVVFDISVVRALWETRVKKHKAWQKKEAERLEKSALEKIKEEWDFVAQCRRKGVPQAEYCKNGFVDTSTRLLEKIERNSVSRQSARVKDRDKRRSPFVFELSGTQWKELPDSLKEQTHLKEWYIHSTLIQIIPTYIELFQAMKILDLPKNQITCLPAEIGRLKNLKELNVSFNHLKSIPPELGDCEHLERLDCSGNLDLMDLPFELSNLKQVTFVDISANKFSSVPICVLRMCRLQWLDISSNNLSDLPQDIDRLEELQGFLLYKNKLTYLPQAMLNLKKLTLLVVSGDHLVEVPTALCDASTPLKFVSLVDNPIDKTGCQDTEDTVESERDRQHFDKEFMKAYIEDLKEREAVPSYTTKVSFSLQL", "length": 371 }, "evidence": [ { "id": "A0A287BDL9", "url": "https://omabrowser.org/oma/group/A0A287BDL9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BYS8-1", "protein_name": "Leucine-rich repeat-containing protein 2", "gene_name": "LRRC2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGHKVVVFDISVIRALWETRVKKHKAWQKKEVERLEKSALEKIKEEWNFVAECRRKGIPQAVYCKNGFIDTSVRLLDKIERNTLTRQSSLPKDRGKRSSAFVFELSGEHWTELPDSLKEQTHLREWYISNTLIQIIPTYIQLFQAMRILDLPKNQISHLPAEIGCLKNLKELNVGFNYLKSIPPELGDCENLERLDCSGNLELMELPFELSNLKQVTFVDISANKFSSVPICVLRMSNLQWLDISSNNLTDLPQDIDRLEELQSFLLYKNKLTYLPYSMLNLKKLTLLVVSGDHLVELPTALCDSSTPLKFVSLMDNPIDNAQCEDGNEIMESERDRQHFDKEVMKAYIEDLKERESVPSYTTKVSFSLQL", "length": 371 }, "evidence": [ { "id": "A0A287BDL9", "url": "https://omabrowser.org/oma/group/A0A287BDL9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "A0A287BDL9", "url": "https://www.uniprot.org/uniprotkb/A0A287BDL9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 173, "end_pos": 175, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 173, "end_pos": 175 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"MKKRRKVTSHLEKIHLGYHKDSSDGNVAAECEQITCTHSTERPAPDTLRCYQELPPSPDQRTLLSSLQYNKNLLKYLNDDRQKQPSFCDLLIIVEGKEFSAHKVVVAVGSSYFHACLSKNPSADVVTLDHVTHSVFQHLLEFLYTSEFFVYKYEIPLVLEAAKFLDIIDAVKLLNNENVATFQSELTEKSSPEETLSELTGRLSNNHQCKFCSRHFCYKKSLENHLAKTHRSLLLGKKHGLKMLERGFSARRPKRNRKCPVKFDDTSDDEQESGDGSDNLNQDHFDKEKSDRNDSEDPGSEYNAEEDELEEEMSDEYSDIEEQSEKDQNDAEEEPEAGDSVGSIHEGLTPVVIQNSNKKILQCPKCDKTFDRIGKYESHTRVHTGEKPFECDICHQRYSTKSNLTVHRKKHSNETEFHKKEHKCPYCNKLHASKKTLAKHVKRFHPENAQEFISIKKTKSESWKCDICKKSFTRRPHLEEHMILHSQDKPFKCTYCEEHFKSRFARLKHQEKFHLGPFPCDICGRQFNDTGNLKRHIECTHGGKRKWTCFICGKSVRERTTLKEHLRIHSGEKPHLCSICGQSFRHGSSYRLHLRVHHDDKRYECDECGKTFIRHDHLTKHKKIHSGEKAHQCEECGKCFGRRDHLTVHYKSVHLGEKVWQKYKATFHQCDVCKKIFKGKSSLEMHFRTHSGEKPYKCQICNQSFRIKKTLTKHLVIHSDARPFNCPHCNATFKRKDKLKYHIDHVHGIKSPDDPLSASEEKLVSLPVEYSSDDKIFQTETKQYMDPPKAYQSEAKTMFQNVSAEVCVPVTLVPVQRPDSQSDLVRHTTTLPPPAHEILSPQPPSADYPRAADLAFLEKYTLTPQPANIVHPVRPEQMLDPREQSYLGTLLGLDNAPAVQNISNSEHHS", "length": 909, "header": "tr|A0A287BEL6-1|A0A287BEL6_PIG Isoform 1 of Zinc finger and BTB domain-containing protein 41 OS=Sus scrofa OX=9823 GN=ZBTB41 PE=4 SV=1 CANONICAL=A0A287BEL6-1" }, "isoforms": [ { "isoform_ac": "A0A287BEL6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BEL6/entry", "sequence": { "sequence": "MKKRRKVTSHLEKIHLGYHKDSSDGNVAAECEQITCTHSTERPAPDTLRCYQELPPSPDQRTLLSSLQYNKNLLKYLNDDRQKQPSFCDLLIIVEGKEFSAHKVVVAVGSSYFHACLSKNPSADVVTLDHVTHSVFQHLLEFLYTSEFFVYKYEIPLVLEAAKFLDIIDAVKLLNNENVATFQSELTEKSSPEETLSELTGRLSNNHQCKFCSRHFCYKKSLENHLAKTHRSLLLGKKHGLKMLERGFSARRPKRNRKCPVKFDDTSDDEQESGDGSDNLNQDHFDKEKSDRNDSEDPGSEYNAEEDELEEEMSDEYSDIEEQSEKDQNDAEEEPEAGDSVGSIHEGLTPVVIQNSNKKILQCPKCDKTFDRIGKYESHTRVHTGEKPFECDICHQRYSTKSNLTVHRKKHSNETEFHKKEHKCPYCNKLHASKKTLAKHVKRFHPENAQEFISIKKTKSESWKCDICKKSFTRRPHLEEHMILHSQDKPFKCTYCEEHFKSRFARLKHQEKFHLGPFPCDICGRQFNDTGNLKRHIECTHGGKRKWTCFICGKSVRERTTLKEHLRIHSGEKPHLCSICGQSFRHGSSYRLHLRVHHDDKRYECDECGKTFIRHDHLTKHKKIHSGEKAHQCEECGKCFGRRDHLTVHYKSVHLGEKVWQKYKATFHQCDVCKKIFKGKSSLEMHFRTHSGEKPYKCQICNQSFRIKKTLTKHLVIHSDARPFNCPHCNATFKRKDKLKYHIDHVHGIKSPDDPLSASEEKLVSLPVEYSSDDKIFQTETKQYMDPPKAYQSEAKTMFQNVSAEVCVPVTLVPVQRPDSQSDLVRHTTTLPPPAHEILSPQPPSADYPRAADLAFLEKYTLTPQPANIVHPVRPEQMLDPREQSYLGTLLGLDNAPAVQNISNSEHHS", "length": 909, "header": "tr|A0A287BEL6-1|A0A287BEL6_PIG Isoform 1 of Zinc finger and BTB domain-containing protein 41 OS=Sus scrofa OX=9823 GN=ZBTB41 PE=4 SV=1 CANONICAL=A0A287BEL6-1" }, "locus": { "chromosome": "10", "start_pos": 20089049, "end_pos": 20051881, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058703.3", "url": "https://www.ensembl.org/id/ENSSSCT00000058703.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054973.1", "url": "https://www.ensembl.org/id/ENSSSCP00000054973.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287BEL6", "url": "https://www.uniprot.org/uniprotkb/A0A287BEL6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100627731", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627731", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2M953-1", "protein_name": "Zinc finger and BTB domain-containing protein 41", "gene_name": "Zbtb41", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKKRRKVTSNLDEKIHLGYHKDSSEENAAVECSQVTYPQATERPTPEALQCYQELPPSPDQRKLLSSLQYNKNLLKYLNDDRQKQPSFCDLLIIVEGKEFSAHKVVVAVGSSYFHACLSKNPSTDVVTLDHVTHSVFQHLLEFLYTSEFFVYKYEIPLVLEAAKFLDIIDAVKLLNNESVATFQAELTEKSSPEETLNELTGRLSSNHQCKFCSRHFCYKKSLENHLAKTHRSLLLGKQHGLKMLERSFSARRSKRNRKCPVKFEDTSDDEQESGGGSDSLNQESFDKEKSDRNDSEDPGSEYNAEDDELEEEMSDEESDTEQSDKDNDAEEEPEAGDSAGSVQEGLAPVIIQNSNKKILQCPKCDKTFDRIGKYESHTRVHTGEKPFECDICHQRYSTKSNLTVHRKKHSNEVEFHKKEHKCPYCNKLHASKKTLAKHVKRFHPENAQEFISIKKTKSESWKCDICKKSFTRRPHLEEHMILHSQDKPFKCTYCEEHFKSRFARLKHQEKFHLGPFPCDICGRQFNDTGNLKRHIECTHGGKRKWTCFICGKSVRERTTLKEHLRIHSGEKPHLCSICGQSFRHGSSYRLHLRVHHDDKRYECDECGKTFIRHDHLTKHKKIHSGEKAHQCEECGKCFGRRDHLTVHYKSVHLGEKVWQKYKATFHQCDVCKKIFKGKSSLEMHFRTHSGEKPYKCQICNQSFRIKKTLTKHLVIHSDARPFNCQHCNATFKRKDKLKYHIDHVHGIKSPEDSLSTSEEKLVSLPTIEYSSDDKIFQAETKQYLDQPKVYQPEAKTLLQNVSAEVCVPVTLVPVQMPDTSSDLVPHTTTLPPSSHEMLPPQPQPTDYPRAADLAFLEKYTLTPQPANIVHPVRPEQMLDPREPSYLGTLLGLDSTTAVQNMSSSEHRSGVNIP", "length": 914 }, "evidence": [ { "id": "A0A287BEL6", "url": "https://omabrowser.org/oma/group/A0A287BEL6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "E1C1B5-1", "protein_name": "Zinc finger and BTB domain-containing protein 41", "gene_name": "ZBTB41", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKKRRRLAANVNEKVHLGREKVASDQILVVDCAQEIVSKPAEIAPADQLESAPELSPSSEQRKLLSSLQYNKNLLKYLNDDRQKRPSFCDLLIIVEGKEFSAHKVVVAVGSSYFHACLSKNPSTDVVTLDHVTHSVFQHLLEFLYTSEFFVYKNEIPLVLEAAKFLDIIDAVKLLNNESVSSIQSDVVTDTPTPVETLNELTGKLLNSHQCTFCGRSFCYKKSLENHLAKAHRSLSLERKHGLKMVEKAGFSTRRSTRNRKCPVKFDDSDSESDDASDSNLEKVNSDKEPSDRSEFEDSGSECNADEEGQEEEMSGEDSDTEEQSEKEHDTEEGSEVADSVGSIPEGLAPVIIQSSNKKLLQCPKCDKKFDRIGKYESHTRVHTGEKPFECDICHQRYSTKSNLTVHRKKHSSDTDFHKKEHKCPYCNKLHASKKTLAKHVKRFHPENVQEFLSIKKTKSEGWKCDICKKSFTRRPHLEEHMILHSQDKPFKCTYCEEHFKSRFARLKHQEKFHLGPFPCDICGRQFNDTGNLKRHIECTHGGKRKWTCFICGKSVRERTTLKEHLRIHSGEKPHLCSICGQSFRHGSSYRLHLRVHHDDKRYECEECGKTFIRHDHLTKHKKIHSGEKAHQCEECGKCFGRRDHLTVHYKSVHLGEKVWQKYKATFHQCEVCKKVFKGKSSLEMHFRTHSGEKPYKCQICNQSFRIKKTLTKHMVIHSDARPFNCQHCNATFKRKDKLKYHIDHVHGTKAAEEALTSSSEEKLVSLPVPYTSDDKVYQTEAKQYVEQPKTYQSEAKTLLQNVSTEVCVPVTLVPVQMPDPQADLVQHTTQSHGILPPQHEQADYQRATDLSFLEKYTLTPQPANIVHPVRPEQMLDPRDQSYLGTLLGLDTAPTVQNISNNEHS", "length": 905 }, "evidence": [ { "id": "A0A287BEL6", "url": "https://omabrowser.org/oma/group/A0A287BEL6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1MLT2-1", "protein_name": "Zinc finger and BTB domain-containing protein 41", "gene_name": "ZBTB41", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKKRRKVTSHLDEKIHLGYHKDSPEGNVVEECDQVTYAHSTERPAPEALRCYQELPPSPDQRKLLSSLQYNKNLLKYLNDDRQKQPSFCDLLIIVEGKEFSAHKVVVAVGSSYFHACLSKNPSTDVVTLDHVTHSVFQHLLEFLYTSEFFVYKYEIPLVLEAAKFLDIIDAVKLLNNENVATFQSELTEKSSPEETLSELTGRLSSNHQCKFCSRHFCYKKSLENHLSKTHRSLLLGKKHGLKMLERSFSTRRSKRNRKCPVKFEDTSDDEQESGDGSDNLNQDSFDKEKSDRNDSEDPGSEYNAEEDELEEEMSDEYSDTEEQSEKDQNDAEEEPEAGDSVGSIHEGLTPVIIQNSNKKILQCPKCDKTFDRIGKYESHTRVHTGEKPFECDICHQRYSTKSNLTVHRKKHSNETEFHKKEHKCPYCNKLHASKKTLAKHVKRFHPENAQEFISIKKTKSESWKCDICKKSFTRRPHLEEHMILHSQDKPFKCTYCEEHFKSRFARLKHQEKFHLGPFPCDICGRQFNDTGNLKRHIECTHGGKRKWTCFICGKSVRERTTLKEHLRIHSGEKPHLCSICGQSFRHGSSYRLHLRVHHDDKRYECDECGKTFIRHDHLTKHKKIHSGEKAHQCEECGKCFGRRDHLTVHYKSVHLGEKVWQKYKATFHQCDVCKKIFKGKSSLEMHFRTHSGEKPYKCQICNQSFRIKKTLTKHLVIHSDARPFNCQHCNATFKRKDKLKYHIDHVHGIKSPDDPLSASEEKLVSLPVEYSSDDKIFQTETKQYMEQPKVYQSEAKTMLQNVSAEVCVPVTLVPVQMPDTQGDLVRHTTTLPPPAHEILSPQPPATDYPRAADLAFLEKYTLTPQPANIVHPVRPEQMLDPREQSYLGTLLGLDNSTAVQNISNSEHHS", "length": 910 }, "evidence": [ { "id": "A0A287BEL6", "url": "https://omabrowser.org/oma/group/A0A287BEL6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F6PFI6-1", "protein_name": "Zinc finger and BTB domain-containing protein 41", "gene_name": "zbtb41", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MKKKLNPKETQETTTACNSKRDVGMTIKDFSLEKKCLRISQNDGCFLKFLNEDRHKLSSFCDTTVTVSGRIYHAHKVVLAFGSGYFHSRFSENPELHHVSIDNMEGSTFGHLLNFLYTSEFEVSECQIPALAEAACFLDMMEAVNILAKWAAPANADEESEVPEEIPNFQNIQTSSGTKCLFCSRTFNYKKSLENHLAKTHSTGCHNEEEQTVVSTSVVTIRRSARQRRVPAKFKSQDSENECVVSAKPNQKIANHNSVTYEEEEEDNESKEENENEQIQQESWKEGQEETFVALEVEAAEYEDCEKPKEACVSEAQKETEPAFSHALEEHNQKTEVSSHIFPEGLAPVVIHSTNKKSLKCPKCDKIFDRKGKYESHTRVHTGEKPFQCDICLQCYSTKSNLTVHKKKHDSGTPVQRKEHKCPFCNKLHASKKTLSRHVKRFHPDHLQEFLTQKKKSEVWKCDICHKSFSRRPHLEEHMILHSQDKPFKCAYCDDYFKSRFARLKHQEKFHLGPFPCDICGRQFNDTGNRKRHIECTHGGKRKWTCFLCGKSVRERTTLREHLRIHSGEKPHLCSICGQSFRHGSSYRLHLRVHHEDKRYECEECGKTFIRHDHLKKHKKIHTGEKAHQCEECGKCFRRADHLTVHYKSIHLGEKIWQRYKAVVHQCQVCKKEFRGKTNLMSHFRTHSGEKPHKCVICNQTFSIKKTLTKHMVIHSDVRPFNCPHCSATFKRKDKLKYHVDHVHSVRLLDQQQNQPASPANKLIDPSLSNKNSKPCQNASKTVLQSVAADVCVPVTLIPVQMTEEADLAVHGVPHGILPALSQPQQSYQSATDLVFLEKYTLTPQPTNIVHPVRVEQMLDPREQSYLGTLLGLDSATPVQNTSSAEHTQ", "length": 889 }, "evidence": [ { "id": "A0A287BEL6", "url": "https://omabrowser.org/oma/group/A0A287BEL6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5SVQ8-1", "protein_name": "Zinc finger and BTB domain-containing protein 41", "gene_name": "ZBTB41", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKKRRKVTSNLEKIHLGYHKDSSEGNVAVECDQVTYTHSAGRPTPEALHCYQELPPSPDQRKLLSSLQYNKNLLKYLNDDRQKQPSFCDLLIIVEGKEFSAHKVVVAVGSSYFHACLSKNPSTDVVTLDHVTHSVFQHLLEFLYTSEFFVYKYEIPLVLEAAKFLDIIDAVKLLNNENVAPFHSELTEKSSPEETLNELTGRLSNNHQCKFCSRHFCYKKSLENHLAKTHRSLLLGKKHGLKMLERSFSARRSKRNRKCPVKFDDTSDDEQESGDGSDNLNQENFDKEKSDRNDSEDPGSEYNAEEDELEEEMSDEYSDIEEQSEKDHNDAEEEPEAGDSVGNVHEGLTPVVIQNSNKKILQCPKCDKTFDRIGKYESHTRVHTGEKPFECDICHQRYSTKSNLTVHRKKHSNETEFHKKEHKCPYCNKLHASKKTLAKHVKRFHPENAQEFISIKKTKSESWKCDICKKSFTRRPHLEEHMILHSQDKPFKCTYCEEHFKSRFARLKHQEKFHLGPFPCDICGRQFNDTGNLKRHIECTHGGKRKWTCFICGKSVRERTTLKEHLRIHSGEKPHLCSICGQSFRHGSSYRLHLRVHHDDKRYECDECGKTFIRHDHLTKHKKIHSGEKAHQCEECGKCFGRRDHLTVHYKSVHLGEKVWQKYKATFHQCDVCKKIFKGKSSLEMHFRTHSGEKPYKCQICNQSFRIKKTLTKHLVIHSDARPFNCQHCNATFKRKDKLKYHIDHVHEIKSPDDPLSTSEEKLVSLPVEYSSDDKIFQTETKQYMDQPKVYQSEAKTMLQNVSAEVCVPVTLVPVQMPDTPSDLVRHTTTLPPSSHEILSPQPQSTDYPRAADLAFLEKYTLTPQPANIVHPVRPEQMLDPREQSYLGTLLGLDSTTGVQNISTNEHHS", "length": 909 }, "evidence": [ { "id": "A0A287BEL6", "url": "https://omabrowser.org/oma/group/A0A287BEL6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q811F1-1", "protein_name": "Zinc finger and BTB domain-containing protein 41", "gene_name": "Zbtb41", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKKRRKVTSNLDEKIHLGYHKDSSEENAAVECGQVTYTQAPERPTPEAAQRCQELPPSPDQRKLLSSLQYNKNLLKYLNDDRQKQPSFCDLLIIVEGKEFSAHKVVVAVGSSYFHACLSKNPSTDVVTLDHVTHSVFQHLLEFLYTSEFFVYKYEIPLVLEAAKFLDIIDAVKLLNNENVAAFQAELTEKSSPEETLNELTGRLSSSHQCKFCSRHFCYKKSLENHLAKTHRSLLLGKKHGLKMLERSFSTRRSKRNRKCPVKFEDTSDDEQESGDGSDNLHQESSEKERSDRNDSEDPGSEYNAEDEELEEEVSDEDSDTEQSDKDNDAEEEPEAGDSAGSIHEGLAPVIIQNSNKKILQCPKCDKTFDRIGKYESHTRVHTGEKPFECDICHQRYSTKSNLTVHRKKHSNEVEFHRKEHKCPYCNKLHASKKTLAKHVKRFHPENAQEFISIKKTKSESWKCDICKKSFTRRPHLEEHMILHSQDKPFKCTYCEEHFKSRFARLKHQEKFHLGPFPCDICGRQFNDTGNLKRHIECTHGGKRKWTCFICGKSVRERTTLKEHLRIHSGEKPHLCSICGQSFRHGSSYRLHLRVHHDDKRYECDECGKTFIRHDHLTKHKKIHSGEKAHQCEECGKCFGRRDHLTVHYKSVHLGEKVWQKYKATFHQCDVCKKIFKGKSSLEMHFRTHSGEKPYKCQICNQSFRIKKTLTKHLVIHSDARPFNCQHCNATFKRKDKLKYHIDHVHGIKSPDDSLSTSEEKLMSLPMEYSSDDKIFQAETKQYLDQPKVYQSEAKTMLQNVSAEVCVPVTLVPVQMPDTSSDLVPHTTTLPTSSHEMLPPQPQSTDYPRAADLAFLEKYTLTPQPANIVHPVRPEQMLDPREPSYLGTLLGLDSTAAVQNMCSSEHRS", "length": 908 }, "evidence": [ { "id": "A0A287BEL6", "url": "https://omabrowser.org/oma/group/A0A287BEL6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A287BEL6", "url": "https://www.uniprot.org/uniprotkb/A0A287BEL6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A287BEL6", "url": "https://www.uniprot.org/uniprotkb/A0A287BEL6" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A287BEL6", "url": "https://www.uniprot.org/uniprotkb/A0A287BEL6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A287BEL6", "url": "https://www.uniprot.org/uniprotkb/A0A287BEL6" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "A0A287BEL6", "url": "https://www.uniprot.org/uniprotkb/A0A287BEL6" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "A0A287BEL6", "url": "https://www.uniprot.org/uniprotkb/A0A287BEL6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 293, "end_pos": 295, "annotation": "n_glycosylation_sequon" }, { "start_pos": 403, "end_pos": 405, "annotation": "n_glycosylation_sequon" }, { "start_pos": 413, "end_pos": 415, "annotation": "n_glycosylation_sequon" }, { "start_pos": 528, "end_pos": 530, "annotation": "n_glycosylation_sequon" }, { "start_pos": 702, "end_pos": 704, "annotation": "n_glycosylation_sequon" }, { "start_pos": 730, "end_pos": 732, "annotation": "n_glycosylation_sequon" }, { "start_pos": 801, "end_pos": 803, "annotation": "n_glycosylation_sequon" }, { "start_pos": 901, "end_pos": 903, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287BEL6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BEL6" }, { "id": "PS50097", "database": "PROSITE", "url": 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reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287BEU7", "url": "https://www.uniprot.org/uniprotkb/A0A287BEU7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:110260930", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110260930", "resource": "KEGG Pathway" } ], 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"MMALVVLYCLISLVSATSWKENTLVKLSQSVADGGNLNNCWICHMSPHASHGQYLPSVVPITDFDTIPDPETFYNLSPPRLTFQVQIASGPPNTPTPCFHLSEVISIAGKMTTGPPRSLKFLLRKCDAQNPPKCTLNECVRANSDSNLCQKVKQVGYHVNGLWKACSSSHSWLDNIISKLPQNEQINDTTLGGVTCAPPGFVFVCGIGSDSPTQGWAHRCLDSWQMQGSCLLGYFRTPFSVHSLQSITSHSKSNSRLKREIMARYEDNKGQSNLIPSAGIYINRDMIRNLSATIEQIAEDTAESIAAQHTSLNSMARVVLDNRMALDFLRAKEGGVCAVAHDTCCTYINSNGEVETQVNKVSQQATWL", "length": 368, "header": "tr|A0A287BEY3-1|A0A287BEY3_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN=LOC100624077 PE=1 SV=1 CANONICAL=A0A287BEY3-1" }, "locus": { "chromosome": "6", "start_pos": 150223303, "end_pos": 150222200, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062204.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062204.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054685.1", "url": "https://www.ensembl.org/id/ENSSSCP00000054685.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { 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"https://www.ncbi.nlm.nih.gov/gene/100625065", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000626", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000626", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR022617", "url": "https://www.ebi.ac.uk/interpro/entry/IPR022617", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029071", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029071", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052324", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052324", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "NVVDHMA", "url": "https://omabrowser.org/oma/group/NVVDHMA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR47187", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47187", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47187:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47187:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF11976", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF11976", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287BF16", "url": "https://www.uniprot.org/uniprotkb/A0A287BF16", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BF16-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BF16-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R6N2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6N2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R6N2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6N2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RFH6", "url": "https://www.uniprot.org/uniprotkb/F1RFH6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RFH6-1", "url": "https://www.uniprot.org/uniprotkb/F1RFH6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAEPLRKRGRRSRGGGVGRGTRGSRGGRGRRPQSQRSPARRTLDPELVDLVSDSDEDVLEVATARGAADPAEVPLPETPVPAAPRDDSDSDSEGADAGPAGAPPILIRRRRRLLLDPGEAPAVPVYSEKVKSSLHLIPDHVSLLKFCPPETEEEAESVDVADASSPHNEDSPCPASPWKRKLRSMDGEEKKKVLLVQDASPVTPPPPRTKSRKHSRALQKLREVNKRLQDLRSCLSPKQPQGQDHLSQEDEVVLVEGPPLPENPRLLPLKIRCRADLVRLPVRMSEPLQSVVDHMATRLGVSPSRILLLFGETELSPTATPRTLKLGVADIIDCVVLASSPEAAGTSQLIQLRVQGKEKHQMLEVSLPRDSPLKTLMSRYEEAMGLSGCKLTFFFDGTKLSGKELPADLGMESGDLIEVWG", "length": 421, "header": "tr|A0A287BF16-1|A0A287BF16_PIG Isoform 1 of NFATC2-interacting protein OS=Sus scrofa OX=9823 GN=NFATC2IP PE=4 SV=1 CANONICAL=A0A287BF16-1" }, "isoforms": [ { "isoform_ac": "A0A287BF16-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BF16/entry", "sequence": { "sequence": "MAEPLRKRGRRSRGGGVGRGTRGSRGGRGRRPQSQRSPARRTLDPELVDLVSDSDEDVLEVATARGAADPAEVPLPETPVPAAPRDDSDSDSEGADAGPAGAPPILIRRRRRLLLDPGEAPAVPVYSEKVKSSLHLIPDHVSLLKFCPPETEEEAESVDVADASSPHNEDSPCPASPWKRKLRSMDGEEKKKVLLVQDASPVTPPPPRTKSRKHSRALQKLREVNKRLQDLRSCLSPKQPQGQDHLSQEDEVVLVEGPPLPENPRLLPLKIRCRADLVRLPVRMSEPLQSVVDHMATRLGVSPSRILLLFGETELSPTATPRTLKLGVADIIDCVVLASSPEAAGTSQLIQLRVQGKEKHQMLEVSLPRDSPLKTLMSRYEEAMGLSGCKLTFFFDGTKLSGKELPADLGMESGDLIEVWG", "length": 421, "header": "tr|A0A287BF16-1|A0A287BF16_PIG Isoform 1 of NFATC2-interacting protein OS=Sus scrofa OX=9823 GN=NFATC2IP PE=4 SV=1 CANONICAL=A0A287BF16-1" }, "locus": { "chromosome": "3", "start_pos": 18620989, "end_pos": 18610034, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039142.3", "url": "https://www.ensembl.org/id/ENSSSCT00000039142.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054669.1", "url": "https://www.ensembl.org/id/ENSSSCP00000054669.1" } ] } }, { "isoform_ac": "A0A5G2R6N2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6N2/entry", "sequence": { "sequence": "MRKSEPLQSVVDHMATRLGVSPSRILLLFGETELSPTATPRTLKLGVADIIDCVVLASSPEAAGTSQLIQLRVQGKEKHQMLEVSLPRDSPLKTLMSRYEEAMGLSGCKLTFFFDGTKLSGKELPADLGMESGDLIEVWG", "length": 140, "header": "tr|A0A5G2R6N2-1|A0A287BF16_PIG Computationally mapped isoform of NFATC2-interacting protein OS=Sus scrofa OX=9823 GN=NFATC2IP PE=4 SV=2 CANONICAL=A0A287BF16-1" }, "locus": { "chromosome": "3", "start_pos": 18620989, "end_pos": 18611206, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081095.2", "url": "https://www.ensembl.org/id/ENSSSCT00000081095.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072739.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072739.1" } ] } }, { "isoform_ac": "F1RFH6-1", "url": "https://www.uniprot.org/uniprotkb/F1RFH6/entry", "sequence": { "sequence": "MAEPLRKRGRRSRGGGVGRGTRGSRGGRGRRPQSQRSPARRTLDPELVDLVSDSDEDVLEVATARGAADPAEVPLPETPVPAAPRDDSDSDSEGADAGPAGAPPILIRRRRRLLLDPGEAPAVPVYSEKVKSSLHLIPDHVSLLKFCPPETEEEAESVDVADASSPHNEDSPCPASPWKRKLRSMDGEEKKKVLLVQDASPVTPPPPRTKSRKHSRALQKLREVNKRLQDLRSCLSPKQPQGQDHLSQEDEVVLVEGPPLPENPRLLPLKIRCRADLVRLPVRMSEPLQSVVDHMATRLGVSPSRILLLFGETELSPTATPRTLKLGVADIIDCVVLASSPEAAGTSQLIQLRVQGKEKHQMLEVSLPRDSPLKTLMSRYEEAMGLSGCKLTFFFDGTKLSGPFRATFLMHRLWKA", "length": 416, "header": "tr|F1RFH6-1|A0A287BF16_PIG Computationally mapped isoform of NFATC2-interacting protein OS=Sus scrofa OX=9823 GN=NFATC2IP PE=4 SV=3 CANONICAL=A0A287BF16-1" }, "locus": { "chromosome": "3", "start_pos": 18621655, "end_pos": 18610034, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008556.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008556.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008337.3", "url": "https://www.ensembl.org/id/ENSSSCP00000008337.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 203, "start_aa": "Thr", "end_pos": 203, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr203", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R6N2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6N2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "F1Q553-1", "protein_name": "NFATC2-interacting protein", "gene_name": "nfatc2ip", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSPHKRTMAETISDSDLPVSDPPKQPPKRRRIIDASSIQTVPVYSNKVNRSLNLKPELFKQTNLTEEEKGGPLWSPSPPRKEKPPISIDLSSSEEEPEQTEPQEILRSPSPPPPPCSPPVKRSRRANQKMREINRKLDAIGSLVCMSPEPQDPVVEYRNSPSPVNDYDDDDDIIIVSSNSKHKRRPCNTEGRDSAREISLKFRCRTELFKIPILSTAPLSKAVEQLAIKLNVPSSQILLLKKDIDLPIHSSVSELGLGIADIIDCVVTEKIQEETDKSDVITVRLQGKEKSSVQVYSLKKTAPIGSILSQYVSSMDVSARRRAKFLFDGSRVSNNQTPAELDMEDGDVIEVWA", "length": 353 }, "evidence": [ { "id": "A0A287BF16", "url": "https://omabrowser.org/oma/group/A0A287BF16/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "G3I7M7-1", "protein_name": "NFATC2-interacting protein", "gene_name": "Nfatc2ip", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAEPGRRRGPRSRGGGAGRGARRARVARGRRPRAPQSLPRFIPDTVLVDLVSDSDEEVLEVVADPVEVPAARPPAPAAPGQDSDSNSEGADEGPTGAPRTLVRRRRRRLLDPGEAPVVPVYSGKVQSSLNLIPDNSSLLKLCPSEPEDEADMTDSGSPPPEDALLSGSPWKKKLRSKNEKDEMKMEEFPDQDISPLPQPSPRNKSRKHTEALQKLREVNKRLQDLQACLSPKQHQSPALQSLDDEVVLVEGAALPQSPRPFTLKIRCRADLVRLPVLTSEPLQNVVDYMANHLGVSPSRILLLSGETELSPTATLRTLKLGVADIIDCVVLTSSSEATETTQKLRLRVQGKEKHQMLEISLSPDSPLKVLMSHYEEAMGLSGHKLSFFFDGTKLSGKELPADLGMETGDLIEVWG", "length": 415 }, "evidence": [ { "id": "A0A287BF16", "url": "https://omabrowser.org/oma/group/A0A287BF16/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "O09130-1", "protein_name": "NFATC2-interacting protein", "gene_name": "Nfatc2ip", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAEPLRGRGPRSRGGRGARRARGARGRCPRARQSPARLIPDTVLVDLVSDSDEEVLEVADPVEVPVARLPAPAKPEQDSDSDSEGAAEGPAGAPRTLVRRRRRRLLDPGEAPVVPVYSGKVQSSLNLIPDNSSLLKLCPSEPEDEADLTNSGSSPSEDDALPSGSPWRKKLRKKCEKEEKKMEEFPDQDISPLPQPSSRNKSRKHTEALQKLREVNKRLQDLRSCLSPKQHQSPALQSTDDEVVLVEGPVLPQSSRLFTLKIRCRADLVRLPVRMSEPLQNVVDHMANHLGVSPNRILLLFGESELSPTATPSTLKLGVADIIDCVVLASSSEATETSQELRLRVQGKEKHQMLEISLSPDSPLKVLMSHYEEAMGLSGHKLSFFFDGTKLSGKELPADLGLESGDLIEVWG", "length": 412 }, "evidence": [ { "id": "A0A287BF16", "url": "https://omabrowser.org/oma/group/A0A287BF16/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6AYG7-1", "protein_name": "NFATC2-interacting protein", "gene_name": "Nfatc2ip", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEPLRRRGPRSRGGRASRGARRARAARGRCPRAPRSPTRLIPDTVLVDLVSDSDEEVLEVVADPGEVPVARLPAPAAPEQDSDSDSEGAAEGPAGAPRTLVRRRRRLLDPGEAPVVPVYSGKVQSSLNLIPDNSSLLKLCPSEPEDEADLTDSGSPPSEDALPPGSPWKKKLRKKHEKEEKKMEEFPDQDISPLPQPSSRNKSRKHTEALQKLREVNKRLQDLRSCLSPKQHQSPALQNTDDEVVLVEGSVLPQNPRLFTLKIRCRADLVRLPVKTSEPLQNVVDHMASHLGVSPNRILLLFGETELSPTATPRTLKLGVADIIDCVVLASSSEDTETSQELRLRVQGKEKHQMLEISLSPDSPLKVLMSHYEEAMGLSGHKLSFFFDGTKLSGKELPTDLGLESGDLIEVWG", "length": 414 }, "evidence": [ { "id": "A0A287BF16", "url": "https://omabrowser.org/oma/group/A0A287BF16/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8NCF5-1", "protein_name": "NFATC2-interacting protein", "gene_name": "NFATC2IP", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAEPVGKRGRWSGGSGAGRGGRGGWGGRGRRPRAQRSPSRGTLDVVSVDLVTDSDEEILEVATARGAADEVEVEPPEPPGPVASRDNSNSDSEGEDRRPAGPPREPVRRRRRLVLDPGEAPLVPVYSGKVKSSLRLIPDDLSLLKLYPPGDEEEAELADSSGLYHEGSPSPGSPWKTKLRTKDKEEKKKTEFLDLDNSPLSPPSPRTKSRTHTRALKKLSEVNKRLQDLRSCLSPKPPQGQEQQGQEDEVVLVEGPTLPETPRLFPLKIRCRADLVRLPLRMSEPLQSVVDHMATHLGVSPSRILLLFGETELSPTATPRTLKLGVADIIDCVVLTSSPEATETSQQLQLRVQGKEKHQTLEVSLSRDSPLKTLMSHYEEAMGLSGRKLSFFFDGTKLSGRELPADLGMESGDLIEVWG", "length": 419 }, "evidence": [ { "id": "A0A287BF16", "url": "https://omabrowser.org/oma/group/A0A287BF16/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF16", "url": "https://www.uniprot.org/uniprotkb/A0A287BF16" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF16", "url": "https://www.uniprot.org/uniprotkb/A0A287BF16" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A287BF16-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 421, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A287BF16-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A287BF16" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A287BF16", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BF16" }, { "id": "PS50053", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50053" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ubiquitin-like", "eco_id": "ECO_0000259", "start_pos": 350, "end_pos": 419, "start_aa": "Ile", "end_aa": "Val", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 203 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "A0A287BF31-1", "uniprot_ac": "A0A287BF31", "uniprot_id": "A0A287BF31_PIG", "mass": { "chemical_mass": 27379.0, "monoisotopic_mass": 27379.0 }, "refseq": { "ac": "XP_020950500", "name": "kallikrein-14", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020950500" }, "gene_names": [ { "name": "KLK14", "type": "recommended", "evidence": [ { "id": "A0A287BF31", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BF31" } ] }, { "name": "KLK14", "type": "synonym", "evidence": [ { "id": "XP_020950500", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020950500" } ] } ], "protein_names": [ { "name": "tissue kallikrein", "type": "recommended", "evidence": [ { "id": "A0A287BF31", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BF31/entry#names_and_taxonomy" } ] }, { "name": "3.4.21.35", "type": "synonym", "evidence": [ { "id": "A0A287BF31", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A287BF31/entry#names_and_taxonomy" } ] }, { "name": "kallikrein-14", "type": "synonym", "evidence": [ { "id": "XP_020950500", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020950500" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A287BF31", "url": "https://www.uniprot.org/uniprotkb/A0A287BF31" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KLK14", "url": "https://www.uniprot.org/uniprotkb/A0A287BF31", "locus": { "chromosome": "6", "start_pos": 55719729, "end_pos": 55725458, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000036362", "url": "https://www.ensembl.org/id/ENSSSCG00000036362" } ] } } ], "crossref": [ { "id": "A0A287BF31", "url": "https://alphafold.ebi.ac.uk/entry/A0A287BF31", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000036362", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000036362", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00190", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00190", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "110261033", "url": "https://www.ncbi.nlm.nih.gov/gene/110261033", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001254", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001254", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001314", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001314", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009003", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009003", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018114", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018114", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR033116", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033116", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043504", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043504", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:110261033", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110261033", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CKYQTWI", "url": "https://omabrowser.org/oma/group/CKYQTWI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287BF31", "url": "https://www.orthodb.org/?gene=A0A287BF31", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24271", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24271", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24271:SF48", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24271:SF48", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00089", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00089", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6809371", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6809371", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020950500", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020950500", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287BF31", "url": "https://www.uniprot.org/uniprotkb/A0A287BF31", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BF31-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BF31-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFLLLTALQILAVATAQSQGNENKIIGGYTCIRNSQPWQAALLAGPWHRFLCGGALLSDQWVITAAHCARPILRVALGKHNLRTREAAQQVLRVVRQVPHPQYNSRTHDNDLMLLQLERAARLGRTARPIAVASSCASPGTPCRVSGWGTISSPIARYPNSLQCVNINVSPDQECRQAYRGAITPGMVCAGVPQGGKDSCQGDSGGPLVCREQLQGLVSWGMERCAQPGYPGVYTNLCKYQAWIQETMQGRS", "length": 252, "header": "tr|A0A287BF31-1|A0A287BF31_PIG Isoform 1 of tissue kallikrein OS=Sus scrofa OX=9823 GN=KLK14 PE=3 SV=1 CANONICAL=A0A287BF31-1" }, "isoforms": [ { "isoform_ac": "A0A287BF31-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BF31/entry", "sequence": { "sequence": "MFLLLTALQILAVATAQSQGNENKIIGGYTCIRNSQPWQAALLAGPWHRFLCGGALLSDQWVITAAHCARPILRVALGKHNLRTREAAQQVLRVVRQVPHPQYNSRTHDNDLMLLQLERAARLGRTARPIAVASSCASPGTPCRVSGWGTISSPIARYPNSLQCVNINVSPDQECRQAYRGAITPGMVCAGVPQGGKDSCQGDSGGPLVCREQLQGLVSWGMERCAQPGYPGVYTNLCKYQAWIQETMQGRS", "length": 252, "header": "tr|A0A287BF31-1|A0A287BF31_PIG Isoform 1 of tissue kallikrein OS=Sus scrofa OX=9823 GN=KLK14 PE=3 SV=1 CANONICAL=A0A287BF31-1" }, "locus": { "chromosome": "6", "start_pos": 55725259, "end_pos": 55720058, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041152.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041152.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054932.1", "url": "https://www.ensembl.org/id/ENSSSCP00000054932.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 184, "start_aa": "Thr", "end_pos": 184, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr184", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF31", "url": "https://www.uniprot.org/uniprotkb/A0A287BF31" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:110261033", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110261033", "resource": "KEGG Pathway" }, { "id": "R-SSC-6809371", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6809371", "resource": "Reactome", "description": "Formation of the cornified envelope" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A1R3UCJ8-1", "protein_name": "Kallikrein related-peptidase 14", "gene_name": "Klk14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLLLLTILQALAVAIVQSQGDDKILGGYTCVQNSQPWQVALQAGPGRRFLCGGVLLSDQWVITAAHCARPLLHVALGKHNLRRWEATQQVLRVVRQVPHPQYRPQAHDNDLMLLKLQRKVRLGRAVRTIPVARSCASPGTPCRVSGWGTTASPIVRYPTALQCVNVNIMPEQVCHRAYPGTITSGMVCAGVPEGGKDSCQGDSGGPLVCQGQLQGLVSWGMERCAMPGYPGVYTNLCNYHSWIQRTMQSN", "length": 250 }, "evidence": [ { "id": "A0A287BF31", "url": "https://omabrowser.org/oma/group/A0A287BF31/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8C2LW84-1", "protein_name": "Kallikrein-14", "gene_name": "Klk14", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLLLLTVLQALALAMVQSQGDHKIIGGYTCIQNSQPWQVALQTGPGRRLVCGGVLLSDRWVITAAHCARPILHAALGKHNLRRWEATQQMVRVIRQVPHPQYQPRAHNNDLMLLQLQKRVRLGRAVRTIDVARSCASPGTPCRVSGWGTTASPVARYPNALQCVNVNIMSEEVCRRAYSATITSGMVCAGVPEGGKDSCQGDSGGPLVCGGQLQGIVSWGMERCAMPGYPGVYTNLCNYQNWIQRTMQGN", "length": 250 }, "evidence": [ { "id": "A0A287BF31", "url": "https://omabrowser.org/oma/group/A0A287BF31/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "F1MXS5-1", "protein_name": "tissue kallikrein", "gene_name": "KLK14", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MFLMLMALQILAVAMAQNQGNEKIIGGYTCTQGSQPWQAALLQGPQRRFLCGGSLLSDQWVITAAHCARPILRVALGKHNLKIPEATQQVLRVVRKVPHPRYNSRTNDNDLMLLQLERPARLGPRVRPISVASSCARVGSSCLVSGWGTISSPVARYPNSLQCVNINISSDQECRRAYSGAITPGMVCAGVPQGGKDSCQGDSGGPLVCGGQLQGLVSWGMERCAQPGYPGVYTNLCKYHTWIQGTIRRRS", "length": 251 }, "evidence": [ { "id": "A0A287BF31", "url": "https://omabrowser.org/oma/group/A0A287BF31/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8CGR5-1", "protein_name": "Kallikrein-14", "gene_name": "Klk14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFLLLIILQALAVAIAQSQGDHKIIGGYRCVRNSQPWQVALQAGPGHRFLCGGVLLSDQWVITAAHCARPILHVALGKHNIRRWEATQQVVRVARQVPHPQYQPQAHDNDLMLLKLQKKVRLGRAVKTISVASSCASPGTPCRVSGWGTIASPIARYPTALQCVNVNIMSEQACHRAYPGIITSGMVCAGVPEGGKDSCQGDSGGPLVCGGQLQGLVSWGMERCAMPGYPGVYANLCNYHSWIQRTMQSN", "length": 250 }, "evidence": [ { "id": "A0A287BF31", "url": "https://omabrowser.org/oma/group/A0A287BF31/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "serine-type endopeptidase activity", "id": "GO:0004252", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004252", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF31", "url": "https://www.uniprot.org/uniprotkb/A0A287BF31" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF31", "url": "https://www.uniprot.org/uniprotkb/A0A287BF31" } ], "pmid": "" }, { "name": "secretory granule", "id": "GO:0030141", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030141", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF31", "url": "https://www.uniprot.org/uniprotkb/A0A287BF31" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF31", "url": "https://www.uniprot.org/uniprotkb/A0A287BF31" } ], "pmid": "" }, { "name": "protein maturation", "id": "GO:0051604", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051604", "evidence": [ { "database": "UniProtKB", "id": "A0A287BF31", "url": "https://www.uniprot.org/uniprotkb/A0A287BF31" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 168, "end_pos": 170, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-8850777", "name": "SPINK6 binds KLK14", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp